Query psy16898
Match_columns 324
No_of_seqs 414 out of 3578
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 16:30:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k6r_A Putative transferase PH 100.0 9E-45 3.1E-49 334.5 19.1 240 46-317 9-274 (278)
2 2frn_A Hypothetical protein PH 100.0 3.3E-35 1.1E-39 271.0 16.8 216 45-292 8-228 (278)
3 2yx1_A Hypothetical protein MJ 100.0 1.6E-34 5.6E-39 273.4 20.8 238 33-304 60-305 (336)
4 3a27_A TYW2, uncharacterized p 100.0 1.6E-32 5.4E-37 252.4 16.8 212 46-294 9-224 (272)
5 2b78_A Hypothetical protein SM 100.0 4E-29 1.4E-33 240.6 25.5 238 63-324 111-367 (385)
6 4dmg_A Putative uncharacterize 100.0 5.5E-29 1.9E-33 240.0 23.1 230 62-324 109-364 (393)
7 3c0k_A UPF0064 protein YCCW; P 100.0 2.8E-27 9.6E-32 228.3 25.7 234 63-324 116-377 (396)
8 2as0_A Hypothetical protein PH 100.0 2.6E-26 8.8E-31 221.5 26.8 236 63-324 113-374 (396)
9 1wxx_A TT1595, hypothetical pr 99.9 5.2E-26 1.8E-30 218.5 25.4 229 64-324 110-363 (382)
10 3v97_A Ribosomal RNA large sub 99.9 3.8E-23 1.3E-27 212.6 23.1 228 61-324 430-689 (703)
11 2igt_A SAM dependent methyltra 99.9 6.1E-22 2.1E-26 186.9 22.9 193 36-260 33-236 (332)
12 2jjq_A Uncharacterized RNA met 99.8 1.3E-20 4.6E-25 183.2 10.8 201 41-290 182-388 (425)
13 3bt7_A TRNA (uracil-5-)-methyl 99.8 7.1E-18 2.4E-22 161.1 17.1 179 67-260 118-306 (369)
14 3axs_A Probable N(2),N(2)-dime 99.8 3.1E-18 1E-22 164.6 14.4 136 127-289 2-158 (392)
15 2dul_A N(2),N(2)-dimethylguano 99.7 3.7E-17 1.3E-21 156.7 15.8 134 127-289 4-164 (378)
16 1uwv_A 23S rRNA (uracil-5-)-me 99.7 2.7E-16 9.1E-21 153.3 12.7 147 116-290 239-390 (433)
17 3p9n_A Possible methyltransfer 99.6 1.7E-14 6E-19 124.0 16.1 112 161-293 43-157 (189)
18 3mti_A RRNA methylase; SAM-dep 99.6 3.8E-14 1.3E-18 121.1 16.0 108 158-293 18-139 (185)
19 3evz_A Methyltransferase; NYSG 99.6 1.3E-14 4.3E-19 128.4 10.7 93 147-260 40-134 (230)
20 1nv8_A HEMK protein; class I a 99.6 3E-14 1E-18 131.2 13.2 107 131-261 90-204 (284)
21 3lpm_A Putative methyltransfer 99.5 2.7E-14 9.2E-19 129.3 12.0 84 160-261 46-131 (259)
22 1ws6_A Methyltransferase; stru 99.5 1.3E-13 4.3E-18 115.7 14.8 108 162-295 41-153 (171)
23 2esr_A Methyltransferase; stru 99.5 9.8E-14 3.3E-18 117.7 14.0 111 160-294 29-143 (177)
24 2fhp_A Methylase, putative; al 99.5 9.6E-14 3.3E-18 118.2 13.9 109 161-293 43-158 (187)
25 2fpo_A Methylase YHHF; structu 99.5 9.1E-14 3.1E-18 121.3 13.1 104 162-293 54-164 (202)
26 1dus_A MJ0882; hypothetical pr 99.5 2.8E-13 9.7E-18 115.4 14.9 145 131-304 18-172 (194)
27 2nxc_A L11 mtase, ribosomal pr 99.5 2.3E-13 7.7E-18 123.2 15.1 142 131-303 86-232 (254)
28 2ift_A Putative methylase HI07 99.5 5.4E-14 1.9E-18 122.6 10.4 106 162-293 53-167 (201)
29 3eey_A Putative rRNA methylase 99.5 2.1E-13 7.2E-18 117.6 14.0 110 157-293 17-143 (197)
30 3njr_A Precorrin-6Y methylase; 99.5 1.1E-13 3.6E-18 121.2 12.1 118 160-306 53-171 (204)
31 2yxd_A Probable cobalt-precorr 99.5 4.6E-13 1.6E-17 113.1 15.0 116 160-306 33-148 (183)
32 2r6z_A UPF0341 protein in RSP 99.5 4.1E-14 1.4E-18 128.7 7.8 85 160-260 81-172 (258)
33 3ajd_A Putative methyltransfer 99.5 4.8E-13 1.7E-17 122.3 14.8 85 160-261 81-168 (274)
34 4dzr_A Protein-(glutamine-N5) 99.5 4.6E-14 1.6E-18 122.5 6.2 83 161-261 29-113 (215)
35 3dmg_A Probable ribosomal RNA 99.5 3.2E-13 1.1E-17 129.5 12.4 131 132-293 196-344 (381)
36 2b3t_A Protein methyltransfera 99.4 6.1E-13 2.1E-17 121.4 12.4 105 132-260 78-187 (276)
37 3tma_A Methyltransferase; thum 99.4 1.1E-12 3.8E-17 124.1 13.6 80 160-260 201-283 (354)
38 3u81_A Catechol O-methyltransf 99.4 6.4E-12 2.2E-16 110.7 17.3 126 160-304 56-185 (221)
39 3e05_A Precorrin-6Y C5,15-meth 99.4 1.6E-12 5.4E-17 112.9 12.9 117 160-305 38-158 (204)
40 2ozv_A Hypothetical protein AT 99.4 3.2E-13 1.1E-17 122.6 8.6 89 160-261 34-127 (260)
41 4gek_A TRNA (CMO5U34)-methyltr 99.4 9.1E-13 3.1E-17 119.9 11.6 110 159-298 67-187 (261)
42 4dcm_A Ribosomal RNA large sub 99.4 2.3E-12 8E-17 123.2 14.6 133 131-293 190-338 (375)
43 3grz_A L11 mtase, ribosomal pr 99.4 1.5E-12 5.1E-17 113.0 11.4 115 159-303 57-173 (205)
44 3tr6_A O-methyltransferase; ce 99.4 3.4E-12 1.2E-16 112.3 13.4 110 160-291 62-176 (225)
45 1wy7_A Hypothetical protein PH 99.4 1.6E-12 5.4E-17 113.0 11.1 75 160-259 47-122 (207)
46 3gdh_A Trimethylguanosine synt 99.4 1.6E-12 5.6E-17 115.6 11.3 80 161-261 77-156 (241)
47 1ixk_A Methyltransferase; open 99.4 2.1E-12 7.1E-17 120.6 12.5 80 160-260 116-198 (315)
48 3duw_A OMT, O-methyltransferas 99.4 9.2E-12 3.2E-16 109.4 16.0 109 160-291 56-169 (223)
49 3m4x_A NOL1/NOP2/SUN family pr 99.4 3.9E-12 1.3E-16 124.3 14.8 80 160-259 103-185 (456)
50 3m6w_A RRNA methylase; rRNA me 99.4 3.8E-12 1.3E-16 124.7 14.7 80 160-260 99-181 (464)
51 3mb5_A SAM-dependent methyltra 99.4 6.6E-13 2.3E-17 119.2 8.4 113 160-302 91-207 (255)
52 3hm2_A Precorrin-6Y C5,15-meth 99.4 3E-12 1E-16 108.0 11.8 119 160-306 23-144 (178)
53 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.5E-12 5.2E-17 114.0 9.9 102 161-289 40-156 (214)
54 3ll7_A Putative methyltransfer 99.4 1.3E-12 4.6E-17 125.8 10.1 84 159-261 90-175 (410)
55 2h00_A Methyltransferase 10 do 99.4 6.2E-13 2.1E-17 119.5 7.1 85 162-261 65-152 (254)
56 3tm4_A TRNA (guanine N2-)-meth 99.4 1E-12 3.6E-17 125.4 8.9 81 160-260 215-297 (373)
57 3dxy_A TRNA (guanine-N(7)-)-me 99.4 4.2E-12 1.4E-16 112.4 11.5 103 162-290 34-151 (218)
58 1l3i_A Precorrin-6Y methyltran 99.3 1.7E-11 5.9E-16 104.0 14.8 117 160-304 31-149 (192)
59 3k0b_A Predicted N6-adenine-sp 99.3 3.1E-12 1.1E-16 123.0 11.2 113 127-260 153-318 (393)
60 1pjz_A Thiopurine S-methyltran 99.3 4.1E-12 1.4E-16 110.8 10.7 95 160-274 20-133 (203)
61 3tfw_A Putative O-methyltransf 99.3 1.7E-11 5.9E-16 110.2 15.2 107 160-291 61-172 (248)
62 2fca_A TRNA (guanine-N(7)-)-me 99.3 5.4E-12 1.9E-16 110.9 11.5 101 162-289 38-153 (213)
63 2vdv_E TRNA (guanine-N(7)-)-me 99.3 6.1E-13 2.1E-17 119.4 5.4 104 160-289 47-173 (246)
64 3ldu_A Putative methylase; str 99.3 1.5E-12 5.2E-17 124.9 8.5 113 127-260 147-312 (385)
65 3kr9_A SAM-dependent methyltra 99.3 1.9E-12 6.4E-17 115.3 7.9 69 156-226 9-79 (225)
66 3ntv_A MW1564 protein; rossman 99.3 1.2E-11 4E-16 110.1 13.1 103 160-289 69-176 (232)
67 1yb2_A Hypothetical protein TA 99.3 1.9E-12 6.4E-17 118.2 7.8 102 160-292 108-214 (275)
68 3ldg_A Putative uncharacterize 99.3 6.3E-12 2.2E-16 120.5 11.7 111 129-260 148-311 (384)
69 3lec_A NADB-rossmann superfami 99.3 1.8E-12 6.2E-17 115.6 7.4 107 156-290 15-126 (230)
70 2frx_A Hypothetical protein YE 99.3 1.3E-11 4.5E-16 121.5 13.4 79 162-260 117-198 (479)
71 1xdz_A Methyltransferase GIDB; 99.3 6.8E-12 2.3E-16 112.0 10.1 102 161-288 69-173 (240)
72 2avd_A Catechol-O-methyltransf 99.3 2.6E-11 8.8E-16 106.9 13.8 109 159-289 66-179 (229)
73 3gnl_A Uncharacterized protein 99.3 5.1E-12 1.7E-16 113.7 9.1 70 156-227 15-86 (244)
74 3gru_A Dimethyladenosine trans 99.3 2.8E-12 9.4E-17 118.8 7.2 109 127-260 15-125 (295)
75 1o54_A SAM-dependent O-methylt 99.3 3.7E-12 1.3E-16 116.1 8.0 103 160-292 110-216 (277)
76 3dr5_A Putative O-methyltransf 99.3 1.2E-11 4.2E-16 109.6 11.0 100 163-288 57-162 (221)
77 1o9g_A RRNA methyltransferase; 99.3 7.1E-13 2.4E-17 119.1 3.0 46 162-207 51-100 (250)
78 3hem_A Cyclopropane-fatty-acyl 99.3 2.2E-11 7.7E-16 112.1 12.9 105 160-295 70-189 (302)
79 3q87_B N6 adenine specific DNA 99.3 1.6E-11 5.4E-16 104.1 10.6 103 161-304 22-138 (170)
80 3g89_A Ribosomal RNA small sub 99.3 1.8E-11 6.1E-16 110.5 11.2 103 161-289 79-184 (249)
81 2h1r_A Dimethyladenosine trans 99.3 3.4E-12 1.1E-16 118.4 6.5 104 132-260 12-117 (299)
82 3m70_A Tellurite resistance pr 99.3 3.4E-11 1.2E-15 109.9 13.1 98 162-290 120-224 (286)
83 3r3h_A O-methyltransferase, SA 99.3 1E-11 3.5E-16 111.5 8.9 109 160-290 58-171 (242)
84 4df3_A Fibrillarin-like rRNA/T 99.3 8.3E-11 2.8E-15 105.2 14.6 134 118-289 38-182 (233)
85 2qm3_A Predicted methyltransfe 99.2 4.1E-11 1.4E-15 114.3 12.8 104 162-292 172-280 (373)
86 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.3E-11 4.4E-16 110.6 8.4 102 160-292 94-201 (258)
87 1nt2_A Fibrillarin-like PRE-rR 99.2 4E-11 1.4E-15 105.4 11.4 101 160-288 55-160 (210)
88 3uwp_A Histone-lysine N-methyl 99.2 6.1E-11 2.1E-15 113.8 13.4 107 160-288 171-287 (438)
89 2yvl_A TRMI protein, hypotheti 99.2 1.7E-11 5.7E-16 109.2 8.9 104 160-292 89-193 (248)
90 3c3p_A Methyltransferase; NP_9 99.2 6.1E-11 2.1E-15 103.4 12.3 101 160-288 54-159 (210)
91 1sui_A Caffeoyl-COA O-methyltr 99.2 4.8E-11 1.6E-15 107.4 11.8 108 160-288 77-189 (247)
92 2b9e_A NOL1/NOP2/SUN domain fa 99.2 4E-11 1.4E-15 111.7 11.5 85 160-262 100-187 (309)
93 3lcc_A Putative methyl chlorid 99.2 1.5E-11 5.3E-16 108.8 8.2 102 162-292 66-174 (235)
94 3c3y_A Pfomt, O-methyltransfer 99.2 1E-10 3.6E-15 104.4 13.5 109 160-289 68-181 (237)
95 3cbg_A O-methyltransferase; cy 99.2 9.6E-11 3.3E-15 104.2 13.2 109 160-290 70-183 (232)
96 1ne2_A Hypothetical protein TA 99.2 2.9E-11 1E-15 104.5 9.6 72 160-260 49-121 (200)
97 2gpy_A O-methyltransferase; st 99.2 4.1E-11 1.4E-15 106.2 10.5 104 160-288 52-159 (233)
98 1g8a_A Fibrillarin-like PRE-rR 99.2 4.7E-11 1.6E-15 105.2 10.7 101 160-288 71-177 (227)
99 2xvm_A Tellurite resistance pr 99.2 6.9E-11 2.4E-15 101.2 11.5 99 161-289 31-136 (199)
100 4hc4_A Protein arginine N-meth 99.2 1.1E-11 3.7E-16 118.4 7.0 92 161-274 82-182 (376)
101 3fpf_A Mtnas, putative unchara 99.2 9.3E-11 3.2E-15 108.2 13.0 101 158-289 118-222 (298)
102 3jwg_A HEN1, methyltransferase 99.2 8E-11 2.7E-15 103.0 12.0 94 161-274 28-134 (219)
103 1ve3_A Hypothetical protein PH 99.2 5.8E-11 2E-15 103.9 10.9 104 157-290 33-143 (227)
104 3kkz_A Uncharacterized protein 99.2 9.4E-11 3.2E-15 105.9 12.5 104 160-291 44-152 (267)
105 2kw5_A SLR1183 protein; struct 99.2 5.4E-11 1.9E-15 102.6 10.4 108 155-293 23-135 (202)
106 3vc1_A Geranyl diphosphate 2-C 99.2 7.8E-11 2.7E-15 109.2 11.5 106 160-293 115-225 (312)
107 3lbf_A Protein-L-isoaspartate 99.2 3.4E-11 1.2E-15 104.7 8.6 77 160-257 75-151 (210)
108 3id6_C Fibrillarin-like rRNA/T 99.2 1.2E-10 4E-15 104.2 12.2 101 160-288 74-180 (232)
109 2hnk_A SAM-dependent O-methylt 99.2 2.2E-10 7.4E-15 102.0 14.0 116 160-289 58-181 (239)
110 1iy9_A Spermidine synthase; ro 99.2 1.1E-10 3.7E-15 106.9 12.2 106 161-293 74-193 (275)
111 1sqg_A SUN protein, FMU protei 99.2 5.5E-11 1.9E-15 115.5 10.7 82 160-261 244-327 (429)
112 2ipx_A RRNA 2'-O-methyltransfe 99.2 6.5E-11 2.2E-15 104.9 10.4 104 160-291 75-184 (233)
113 1jsx_A Glucose-inhibited divis 99.2 4.6E-11 1.6E-15 103.5 9.1 98 162-289 65-165 (207)
114 1nkv_A Hypothetical protein YJ 99.2 9.6E-11 3.3E-15 104.7 11.3 106 155-289 27-140 (256)
115 3jwh_A HEN1; methyltransferase 99.2 1.1E-10 3.9E-15 101.9 11.5 94 161-274 28-134 (217)
116 2o07_A Spermidine synthase; st 99.2 1.1E-10 3.6E-15 108.5 11.9 106 161-293 94-213 (304)
117 1i9g_A Hypothetical protein RV 99.2 3.5E-11 1.2E-15 109.4 8.2 105 160-293 97-207 (280)
118 3tqs_A Ribosomal RNA small sub 99.2 2.2E-11 7.5E-16 110.4 6.6 86 155-260 20-107 (255)
119 2yxl_A PH0851 protein, 450AA l 99.2 7.7E-11 2.6E-15 115.2 11.0 83 160-261 257-342 (450)
120 2fk8_A Methoxy mycolic acid sy 99.2 1.3E-10 4.3E-15 107.8 11.8 104 160-294 88-199 (318)
121 1dl5_A Protein-L-isoaspartate 99.2 5.9E-11 2E-15 110.6 9.6 114 138-274 49-168 (317)
122 1inl_A Spermidine synthase; be 99.2 1.2E-10 4.2E-15 107.7 11.7 106 161-293 89-209 (296)
123 2pt6_A Spermidine synthase; tr 99.2 5.4E-10 1.8E-14 104.5 16.2 107 160-293 114-234 (321)
124 2gb4_A Thiopurine S-methyltran 99.2 8.3E-11 2.8E-15 106.3 10.0 97 161-274 67-184 (252)
125 3f4k_A Putative methyltransfer 99.2 1.5E-10 5.3E-15 103.4 11.7 103 160-290 44-151 (257)
126 3sm3_A SAM-dependent methyltra 99.2 9.3E-11 3.2E-15 102.9 10.1 109 157-293 25-145 (235)
127 3ckk_A TRNA (guanine-N(7)-)-me 99.2 8.2E-11 2.8E-15 105.2 9.6 104 160-289 44-168 (235)
128 1kpg_A CFA synthase;, cyclopro 99.2 1.4E-10 4.8E-15 105.7 11.3 103 160-293 62-172 (287)
129 1fbn_A MJ fibrillarin homologu 99.2 8E-11 2.7E-15 104.3 9.4 101 160-288 72-177 (230)
130 1mjf_A Spermidine synthase; sp 99.2 1.7E-10 5.7E-15 105.9 11.8 104 160-292 73-196 (281)
131 1zq9_A Probable dimethyladenos 99.2 3.3E-11 1.1E-15 110.9 7.0 84 155-260 19-104 (285)
132 1xxl_A YCGJ protein; structura 99.2 1.7E-10 5.8E-15 102.6 11.3 107 160-295 19-130 (239)
133 3g2m_A PCZA361.24; SAM-depende 99.2 7.9E-11 2.7E-15 108.3 9.3 115 150-293 69-194 (299)
134 2qfm_A Spermine synthase; sper 99.1 8.8E-10 3E-14 104.2 16.2 127 162-311 188-339 (364)
135 3fzg_A 16S rRNA methylase; met 99.1 2.5E-10 8.4E-15 98.7 11.3 77 157-256 44-122 (200)
136 4htf_A S-adenosylmethionine-de 99.1 2.1E-10 7.3E-15 104.5 11.6 102 162-290 68-174 (285)
137 2fyt_A Protein arginine N-meth 99.1 1.1E-10 3.8E-15 110.0 9.9 94 160-274 62-164 (340)
138 2oyr_A UPF0341 protein YHIQ; a 99.1 4.8E-11 1.6E-15 108.3 6.6 83 161-260 85-175 (258)
139 1vl5_A Unknown conserved prote 99.1 4.2E-10 1.4E-14 101.0 12.6 105 160-293 35-144 (260)
140 2b25_A Hypothetical protein; s 99.1 1.8E-10 6.3E-15 107.9 10.6 107 160-293 103-223 (336)
141 3q7e_A Protein arginine N-meth 99.1 1.2E-10 4.3E-15 110.0 9.2 94 160-274 64-166 (349)
142 2pxx_A Uncharacterized protein 99.1 1.1E-10 3.9E-15 100.9 8.3 106 156-292 36-162 (215)
143 1m6y_A S-adenosyl-methyltransf 99.1 1.7E-10 5.9E-15 107.0 9.9 94 160-270 24-119 (301)
144 3fut_A Dimethyladenosine trans 99.1 1.8E-11 6E-16 112.0 3.1 103 132-260 17-121 (271)
145 3ggd_A SAM-dependent methyltra 99.1 4.2E-10 1.4E-14 100.0 12.1 111 156-293 50-167 (245)
146 2pjd_A Ribosomal RNA small sub 99.1 1.5E-10 5.2E-15 109.0 9.6 128 132-292 165-306 (343)
147 3r0q_C Probable protein argini 99.1 1.3E-10 4.3E-15 111.1 9.1 93 160-274 61-162 (376)
148 3dh0_A SAM dependent methyltra 99.1 3.3E-10 1.1E-14 98.8 10.8 105 160-293 35-147 (219)
149 2p8j_A S-adenosylmethionine-de 99.1 4E-10 1.4E-14 97.4 10.9 106 157-292 18-131 (209)
150 3adn_A Spermidine synthase; am 99.1 2E-10 6.8E-15 106.2 9.4 108 161-293 82-202 (294)
151 3b3j_A Histone-arginine methyl 99.1 1.3E-10 4.6E-15 114.4 8.7 77 161-259 157-234 (480)
152 3ocj_A Putative exported prote 99.1 1.4E-10 4.7E-15 107.2 8.2 106 158-292 114-230 (305)
153 2pbf_A Protein-L-isoaspartate 99.1 2.4E-10 8.2E-15 100.6 9.3 106 159-290 77-194 (227)
154 1wzn_A SAM-dependent methyltra 99.1 3.6E-10 1.2E-14 100.8 10.4 91 161-274 40-138 (252)
155 3ofk_A Nodulation protein S; N 99.1 1.4E-10 4.7E-15 101.1 7.5 98 161-290 50-155 (216)
156 1uir_A Polyamine aminopropyltr 99.1 6.5E-10 2.2E-14 103.6 12.4 108 160-292 75-198 (314)
157 3d2l_A SAM-dependent methyltra 99.1 5.7E-10 2E-14 98.6 11.4 96 155-274 26-130 (243)
158 3bzb_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 102.4 11.5 98 161-272 78-191 (281)
159 2o57_A Putative sarcosine dime 99.1 6E-10 2E-14 102.0 11.8 104 160-292 80-190 (297)
160 3dtn_A Putative methyltransfer 99.1 2.9E-10 9.8E-15 100.3 9.3 104 161-296 43-155 (234)
161 3g5t_A Trans-aconitate 3-methy 99.1 4.2E-10 1.5E-14 103.4 10.7 110 161-292 35-152 (299)
162 1g6q_1 HnRNP arginine N-methyl 99.1 2.3E-10 8E-15 107.1 9.1 94 160-274 36-138 (328)
163 3bus_A REBM, methyltransferase 99.1 4.1E-10 1.4E-14 101.6 10.4 105 160-292 59-169 (273)
164 2y1w_A Histone-arginine methyl 99.1 2.6E-10 9E-15 107.7 9.3 92 161-274 49-148 (348)
165 3ujc_A Phosphoethanolamine N-m 99.1 1.7E-10 5.8E-15 103.3 7.5 104 160-294 53-164 (266)
166 1zx0_A Guanidinoacetate N-meth 99.1 3.4E-10 1.2E-14 100.4 9.4 104 160-291 58-172 (236)
167 1i1n_A Protein-L-isoaspartate 99.1 3.3E-10 1.1E-14 99.6 9.1 103 160-292 75-185 (226)
168 3dlc_A Putative S-adenosyl-L-m 99.1 2.1E-10 7.2E-15 99.4 7.7 98 164-289 45-148 (219)
169 3gjy_A Spermidine synthase; AP 99.1 5E-10 1.7E-14 104.4 10.6 102 165-293 92-204 (317)
170 3bwc_A Spermidine synthase; SA 99.1 1.1E-09 3.7E-14 101.6 12.8 108 161-292 94-213 (304)
171 3orh_A Guanidinoacetate N-meth 99.1 2.8E-10 9.7E-15 101.5 8.6 101 160-288 58-169 (236)
172 3iv6_A Putative Zn-dependent a 99.1 2.9E-10 9.9E-15 103.4 8.8 48 160-207 43-90 (261)
173 3ou2_A SAM-dependent methyltra 99.1 5.3E-10 1.8E-14 97.0 10.0 101 158-292 42-149 (218)
174 3dou_A Ribosomal RNA large sub 99.1 4.2E-10 1.4E-14 97.4 9.2 115 160-304 23-154 (191)
175 3h2b_A SAM-dependent methyltra 99.1 5.1E-10 1.7E-14 96.5 9.6 98 162-293 41-145 (203)
176 2b2c_A Spermidine synthase; be 99.1 8E-10 2.7E-14 103.1 11.6 105 160-291 106-224 (314)
177 1qam_A ERMC' methyltransferase 99.1 1.3E-10 4.3E-15 104.5 6.0 83 155-260 21-105 (244)
178 1ri5_A MRNA capping enzyme; me 99.1 7.4E-10 2.5E-14 100.9 11.1 105 159-290 61-175 (298)
179 2f8l_A Hypothetical protein LM 99.1 1.2E-10 4.3E-15 109.6 5.8 75 162-259 130-211 (344)
180 3v97_A Ribosomal RNA large sub 99.0 1.6E-10 5.5E-15 118.8 7.0 113 130-260 145-314 (703)
181 1xj5_A Spermidine synthase 1; 99.0 1.1E-09 3.6E-14 103.1 12.0 103 161-289 119-235 (334)
182 3uzu_A Ribosomal RNA small sub 99.0 2.6E-10 9E-15 104.6 7.6 107 133-260 13-125 (279)
183 3gu3_A Methyltransferase; alph 99.0 2.6E-10 8.8E-15 104.2 7.5 101 160-291 20-128 (284)
184 3p2e_A 16S rRNA methylase; met 99.0 7.3E-11 2.5E-15 104.8 3.6 100 160-287 22-137 (225)
185 1y8c_A S-adenosylmethionine-de 99.0 7.3E-10 2.5E-14 97.8 10.0 90 162-274 37-135 (246)
186 3e23_A Uncharacterized protein 99.0 8.8E-10 3E-14 95.7 10.2 100 155-290 36-142 (211)
187 1u2z_A Histone-lysine N-methyl 99.0 1.4E-09 4.7E-14 105.6 12.2 62 160-223 240-311 (433)
188 3thr_A Glycine N-methyltransfe 99.0 2.1E-09 7.3E-14 98.0 12.6 105 161-290 56-176 (293)
189 3l8d_A Methyltransferase; stru 99.0 7.8E-10 2.7E-14 97.8 9.3 106 156-293 47-157 (242)
190 3cgg_A SAM-dependent methyltra 99.0 1.5E-09 5E-14 92.2 10.6 100 158-291 42-149 (195)
191 4hg2_A Methyltransferase type 99.0 5.5E-10 1.9E-14 101.2 8.3 103 156-293 33-139 (257)
192 2i7c_A Spermidine synthase; tr 99.0 1.9E-09 6.5E-14 98.9 11.9 108 161-293 77-196 (283)
193 3mgg_A Methyltransferase; NYSG 99.0 1.1E-09 3.7E-14 99.1 9.9 100 160-288 35-141 (276)
194 4azs_A Methyltransferase WBDD; 99.0 8.7E-10 3E-14 110.8 10.0 79 159-256 63-141 (569)
195 2ex4_A Adrenal gland protein A 99.0 7.7E-10 2.6E-14 98.3 8.2 100 162-290 79-186 (241)
196 3hnr_A Probable methyltransfer 99.0 5.7E-10 2E-14 97.3 7.2 98 161-292 44-148 (220)
197 2yxe_A Protein-L-isoaspartate 99.0 8.8E-10 3E-14 96.0 8.4 100 160-290 75-178 (215)
198 3g07_A 7SK snRNA methylphospha 99.0 6.2E-10 2.1E-14 102.4 7.8 48 161-208 45-94 (292)
199 2okc_A Type I restriction enzy 99.0 4E-10 1.4E-14 109.9 6.7 79 161-260 170-264 (445)
200 3g5l_A Putative S-adenosylmeth 99.0 1.4E-09 4.8E-14 97.1 9.6 103 155-289 35-145 (253)
201 2yqz_A Hypothetical protein TT 99.0 1.1E-09 3.9E-14 97.8 8.5 99 160-288 37-140 (263)
202 1vbf_A 231AA long hypothetical 99.0 7.4E-10 2.5E-14 97.6 6.9 98 160-290 68-166 (231)
203 2p7i_A Hypothetical protein; p 99.0 1.3E-09 4.4E-14 96.2 8.4 98 160-292 40-144 (250)
204 1jg1_A PIMT;, protein-L-isoasp 99.0 6.1E-10 2.1E-14 98.8 6.2 101 160-291 89-191 (235)
205 3dli_A Methyltransferase; PSI- 99.0 2.4E-09 8.2E-14 95.0 10.1 99 160-293 39-144 (240)
206 3e8s_A Putative SAM dependent 98.9 2.2E-09 7.6E-14 93.4 9.4 101 161-292 51-155 (227)
207 3pfg_A N-methyltransferase; N, 98.9 1.5E-09 5.1E-14 97.6 8.5 89 159-274 47-144 (263)
208 3bkx_A SAM-dependent methyltra 98.9 3E-09 1E-13 96.0 10.2 109 160-293 41-163 (275)
209 3ftd_A Dimethyladenosine trans 98.9 4.5E-10 1.5E-14 101.4 4.3 82 155-260 22-106 (249)
210 4fzv_A Putative methyltransfer 98.9 9E-09 3.1E-13 97.5 13.4 84 159-261 145-235 (359)
211 2ar0_A M.ecoki, type I restric 98.9 1.5E-09 5E-14 108.5 8.3 97 143-260 150-272 (541)
212 3i9f_A Putative type 11 methyl 98.9 3.8E-09 1.3E-13 88.4 9.5 97 160-293 15-116 (170)
213 3bkw_A MLL3908 protein, S-aden 98.9 2.3E-09 7.8E-14 94.7 8.4 89 162-274 43-137 (243)
214 3m33_A Uncharacterized protein 98.9 9.1E-10 3.1E-14 97.1 5.7 90 159-274 45-135 (226)
215 1r18_A Protein-L-isoaspartate( 98.9 1.6E-09 5.3E-14 95.6 6.7 104 159-292 81-197 (227)
216 1qyr_A KSGA, high level kasuga 98.9 1.2E-09 4.1E-14 98.8 5.5 81 160-260 19-101 (252)
217 3htx_A HEN1; HEN1, small RNA m 98.9 3.6E-09 1.2E-13 108.8 9.4 110 144-274 700-828 (950)
218 1xtp_A LMAJ004091AAA; SGPP, st 98.9 2.5E-09 8.7E-14 95.1 7.3 98 161-289 92-197 (254)
219 1yub_A Ermam, rRNA methyltrans 98.9 6.5E-11 2.2E-15 106.2 -3.2 83 155-260 20-104 (245)
220 3ccf_A Cyclopropane-fatty-acyl 98.9 5.1E-09 1.7E-13 95.1 9.2 99 160-293 55-158 (279)
221 1ej0_A FTSJ; methyltransferase 98.9 4.5E-09 1.5E-13 87.4 7.9 112 160-304 20-151 (180)
222 4fsd_A Arsenic methyltransfera 98.9 8E-09 2.7E-13 98.6 10.2 113 160-292 81-206 (383)
223 2ih2_A Modification methylase 98.8 1.4E-09 4.8E-14 104.5 4.8 84 144-260 21-109 (421)
224 3lkd_A Type I restriction-modi 98.8 2.9E-09 1E-13 106.2 7.0 80 162-260 221-308 (542)
225 3mq2_A 16S rRNA methyltransfer 98.8 1.6E-09 5.6E-14 94.6 4.6 63 160-225 25-93 (218)
226 3bxo_A N,N-dimethyltransferase 98.8 6.3E-09 2.1E-13 91.6 8.2 88 160-274 38-134 (239)
227 2nyu_A Putative ribosomal RNA 98.8 1.7E-08 5.9E-13 86.2 10.3 111 159-302 19-158 (196)
228 3bgv_A MRNA CAP guanine-N7 met 98.8 1.8E-08 6.3E-13 93.0 11.3 111 161-292 33-158 (313)
229 2vdw_A Vaccinia virus capping 98.8 1.6E-08 5.5E-13 93.6 10.4 107 162-290 48-170 (302)
230 2avn_A Ubiquinone/menaquinone 98.8 1.1E-08 3.6E-13 92.1 8.8 99 159-292 51-155 (260)
231 3ege_A Putative methyltransfer 98.8 4.6E-09 1.6E-13 94.6 6.1 101 156-292 26-133 (261)
232 2p35_A Trans-aconitate 2-methy 98.8 1.2E-08 4.2E-13 90.9 8.8 103 155-292 24-135 (259)
233 3khk_A Type I restriction-modi 98.8 2.4E-09 8.3E-14 106.9 4.4 79 164-261 246-341 (544)
234 2plw_A Ribosomal RNA methyltra 98.8 1.3E-08 4.6E-13 87.4 8.5 52 160-225 20-75 (201)
235 2cmg_A Spermidine synthase; tr 98.8 3.3E-09 1.1E-13 96.4 4.8 100 161-292 71-174 (262)
236 2gs9_A Hypothetical protein TT 98.8 1.5E-08 5.2E-13 87.7 8.6 98 159-293 33-136 (211)
237 1qzz_A RDMB, aclacinomycin-10- 98.8 2.1E-08 7.3E-13 94.8 9.5 100 160-290 180-288 (374)
238 2oo3_A Protein involved in cat 98.7 1.6E-09 5.6E-14 98.8 1.5 86 156-261 86-171 (283)
239 2wa2_A Non-structural protein 98.7 1.4E-09 4.6E-14 99.7 0.7 103 160-294 80-198 (276)
240 2i62_A Nicotinamide N-methyltr 98.7 9.5E-09 3.3E-13 91.8 6.0 47 161-207 55-102 (265)
241 2r3s_A Uncharacterized protein 98.7 3.6E-08 1.2E-12 91.6 9.6 103 161-293 164-275 (335)
242 1x19_A CRTF-related protein; m 98.7 4.5E-08 1.5E-12 92.3 10.3 102 160-292 188-298 (359)
243 2oxt_A Nucleoside-2'-O-methylt 98.7 1.4E-09 5E-14 98.9 -0.3 102 160-293 72-189 (265)
244 2a14_A Indolethylamine N-methy 98.7 9.9E-09 3.4E-13 92.7 5.2 47 161-207 54-101 (263)
245 3dp7_A SAM-dependent methyltra 98.7 4.5E-08 1.6E-12 92.6 9.5 104 161-292 178-290 (363)
246 1tw3_A COMT, carminomycin 4-O- 98.7 4.4E-08 1.5E-12 92.2 9.1 101 160-291 181-290 (360)
247 2qe6_A Uncharacterized protein 98.7 2.3E-07 7.8E-12 84.6 13.5 107 163-293 78-200 (274)
248 3lcv_B Sisomicin-gentamicin re 98.7 1.4E-08 4.9E-13 91.6 5.1 76 159-257 129-206 (281)
249 2bm8_A Cephalosporin hydroxyla 98.7 7.3E-09 2.5E-13 92.4 3.2 98 161-290 80-188 (236)
250 1p91_A Ribosomal RNA large sub 98.7 3.4E-08 1.2E-12 88.9 7.6 97 161-294 84-183 (269)
251 3gwz_A MMCR; methyltransferase 98.7 1.2E-07 4.2E-12 89.9 11.3 103 160-293 200-311 (369)
252 3frh_A 16S rRNA methylase; met 98.6 3.3E-08 1.1E-12 88.4 6.8 72 161-256 104-175 (253)
253 3mcz_A O-methyltransferase; ad 98.6 9.5E-08 3.2E-12 89.6 9.9 101 163-291 180-289 (352)
254 3i53_A O-methyltransferase; CO 98.6 1.1E-07 3.7E-12 88.6 10.0 100 162-292 169-277 (332)
255 3opn_A Putative hemolysin; str 98.6 9.1E-09 3.1E-13 91.7 0.8 43 162-204 37-80 (232)
256 2ip2_A Probable phenazine-spec 98.6 7.8E-08 2.7E-12 89.5 7.1 98 164-292 169-275 (334)
257 1wg8_A Predicted S-adenosylmet 98.6 1.6E-07 5.6E-12 85.5 8.7 91 160-270 20-110 (285)
258 2p41_A Type II methyltransfera 98.5 1.5E-08 5.2E-13 94.0 0.9 101 160-294 80-196 (305)
259 3ufb_A Type I restriction-modi 98.5 7.2E-08 2.5E-12 96.0 5.6 98 143-260 198-313 (530)
260 3hp7_A Hemolysin, putative; st 98.5 9.7E-08 3.3E-12 87.9 5.9 57 145-201 65-125 (291)
261 2g72_A Phenylethanolamine N-me 98.5 1.3E-07 4.5E-12 86.2 6.8 44 162-205 71-115 (289)
262 2aot_A HMT, histamine N-methyl 98.5 8.9E-07 3E-11 80.9 11.7 108 161-292 51-175 (292)
263 4e2x_A TCAB9; kijanose, tetron 98.5 2.3E-07 7.8E-12 89.1 7.7 89 161-274 106-201 (416)
264 1vlm_A SAM-dependent methyltra 98.5 2.9E-07 1E-11 80.3 7.8 96 157-292 42-142 (219)
265 3s1s_A Restriction endonucleas 98.5 7.6E-08 2.6E-12 98.9 4.5 80 162-260 321-410 (878)
266 3cvo_A Methyltransferase-like 98.4 1.4E-06 4.8E-11 75.9 11.4 138 159-317 27-183 (202)
267 3ua3_A Protein arginine N-meth 98.4 8.3E-07 2.8E-11 90.0 10.1 96 163-274 410-527 (745)
268 3cc8_A Putative methyltransfer 98.4 2.5E-07 8.4E-12 80.4 5.2 100 156-289 25-130 (230)
269 1af7_A Chemotaxis receptor met 98.3 5.2E-07 1.8E-11 82.4 6.4 43 162-204 105-157 (274)
270 4gqb_A Protein arginine N-meth 98.3 5.3E-07 1.8E-11 91.1 7.1 90 163-274 358-460 (637)
271 1g60_A Adenine-specific methyl 98.3 9.3E-07 3.2E-11 79.8 7.6 49 160-208 210-258 (260)
272 2zig_A TTHA0409, putative modi 98.3 1.8E-06 6.1E-11 79.5 9.4 47 161-207 234-280 (297)
273 3giw_A Protein of unknown func 98.3 6.6E-06 2.3E-10 75.0 12.5 109 164-295 80-206 (277)
274 2xyq_A Putative 2'-O-methyl tr 98.3 8.3E-07 2.9E-11 81.7 6.5 102 160-305 61-187 (290)
275 1g55_A DNA cytosine methyltran 98.2 9.7E-07 3.3E-11 83.1 5.7 73 164-259 3-78 (343)
276 3g7u_A Cytosine-specific methy 98.2 3.5E-06 1.2E-10 80.3 8.9 78 164-259 3-81 (376)
277 3lst_A CALO1 methyltransferase 98.2 1E-06 3.6E-11 82.6 5.0 99 160-292 182-289 (348)
278 3sso_A Methyltransferase; macr 98.2 4.2E-06 1.4E-10 80.1 8.8 97 161-291 215-326 (419)
279 2k4m_A TR8_protein, UPF0146 pr 98.1 1.9E-06 6.4E-11 70.9 4.7 71 156-261 29-102 (153)
280 1fp2_A Isoflavone O-methyltran 98.1 3.9E-06 1.3E-10 78.8 6.3 97 160-292 186-291 (352)
281 3c6k_A Spermine synthase; sper 98.1 2.8E-05 9.5E-10 73.8 12.2 110 162-293 205-335 (381)
282 4a6d_A Hydroxyindole O-methylt 98.1 9.6E-06 3.3E-10 76.4 8.8 100 160-291 177-285 (353)
283 3o4f_A Spermidine synthase; am 98.0 2.1E-05 7.1E-10 72.3 10.0 108 161-293 82-202 (294)
284 2zfu_A Nucleomethylin, cerebra 98.0 3.6E-06 1.2E-10 72.8 3.9 86 160-292 65-154 (215)
285 2c7p_A Modification methylase 98.0 7.1E-06 2.4E-10 76.7 6.1 71 163-260 11-82 (327)
286 4auk_A Ribosomal RNA large sub 98.0 6E-06 2E-10 78.1 5.6 72 160-259 209-280 (375)
287 3reo_A (ISO)eugenol O-methyltr 97.9 1.1E-05 3.6E-10 76.4 6.6 93 161-292 202-303 (368)
288 1fp1_D Isoliquiritigenin 2'-O- 97.9 1.1E-05 3.9E-10 76.2 6.0 93 160-291 207-308 (372)
289 2qy6_A UPF0209 protein YFCK; s 97.9 8.5E-06 2.9E-10 73.6 4.5 109 162-291 60-215 (257)
290 3tka_A Ribosomal RNA small sub 97.9 3.5E-05 1.2E-09 71.8 8.3 105 146-270 42-149 (347)
291 1i4w_A Mitochondrial replicati 97.8 4.4E-05 1.5E-09 72.0 8.9 58 163-226 59-118 (353)
292 3p9c_A Caffeic acid O-methyltr 97.8 2.6E-05 8.8E-10 73.7 6.7 94 160-292 199-301 (364)
293 1zg3_A Isoflavanone 4'-O-methy 97.8 2.5E-05 8.5E-10 73.4 6.2 93 161-292 192-296 (358)
294 2qrv_A DNA (cytosine-5)-methyl 97.8 5.8E-05 2E-09 69.5 8.3 78 161-260 14-94 (295)
295 1boo_A Protein (N-4 cytosine-s 97.7 1.2E-05 4.1E-10 74.9 3.4 62 160-225 250-311 (323)
296 3evf_A RNA-directed RNA polyme 97.6 4.7E-06 1.6E-10 75.5 -1.1 122 160-304 72-201 (277)
297 4h0n_A DNMT2; SAH binding, tra 97.6 7.1E-05 2.4E-09 70.0 6.3 72 165-259 5-79 (333)
298 3ubt_Y Modification methylase 97.6 5E-05 1.7E-09 70.4 4.9 70 165-260 2-72 (331)
299 3qv2_A 5-cytosine DNA methyltr 97.6 0.00011 3.8E-09 68.6 7.2 74 163-260 10-87 (327)
300 3gcz_A Polyprotein; flavivirus 97.6 2.1E-06 7.2E-11 77.9 -4.6 36 160-195 88-125 (282)
301 3me5_A Cytosine-specific methy 97.6 0.00012 4E-09 71.9 7.3 59 163-226 88-147 (482)
302 2px2_A Genome polyprotein [con 97.5 3.6E-05 1.2E-09 68.9 2.4 111 159-300 70-193 (269)
303 3p8z_A Mtase, non-structural p 97.5 0.00022 7.4E-09 63.1 7.2 110 160-294 76-191 (267)
304 2py6_A Methyltransferase FKBM; 97.5 0.00028 9.7E-09 67.7 8.4 59 161-220 225-289 (409)
305 1eg2_A Modification methylase 97.4 0.00018 6.1E-09 66.9 6.0 54 155-208 234-291 (319)
306 3eld_A Methyltransferase; flav 97.3 1.9E-05 6.5E-10 72.1 -2.1 120 159-303 78-207 (300)
307 2wk1_A NOVP; transferase, O-me 97.2 0.0014 4.8E-08 59.7 9.3 103 162-290 106-245 (282)
308 2ld4_A Anamorsin; methyltransf 97.0 0.00035 1.2E-08 58.2 3.4 78 160-274 10-94 (176)
309 3swr_A DNA (cytosine-5)-methyl 96.8 0.0055 1.9E-07 64.9 10.7 86 164-259 541-628 (1002)
310 4ft4_B DNA (cytosine-5)-methyl 96.6 0.0033 1.1E-07 65.1 7.8 58 164-229 213-277 (784)
311 3av4_A DNA (cytosine-5)-methyl 96.2 0.013 4.5E-07 63.6 9.3 86 163-259 851-939 (1330)
312 3r24_A NSP16, 2'-O-methyl tran 96.0 0.014 4.7E-07 53.3 7.3 101 160-302 107-230 (344)
313 3lkz_A Non-structural protein 95.8 0.0061 2.1E-07 55.6 3.7 36 160-195 92-129 (321)
314 4dkj_A Cytosine-specific methy 94.9 0.019 6.5E-07 54.9 4.4 42 164-205 11-59 (403)
315 4fn4_A Short chain dehydrogena 93.3 0.71 2.4E-05 41.0 11.0 60 162-225 6-68 (254)
316 3s2e_A Zinc-containing alcohol 92.6 0.37 1.3E-05 44.2 8.4 44 159-202 163-208 (340)
317 3gms_A Putative NADPH:quinone 91.4 0.31 1.1E-05 44.7 6.4 43 160-202 142-187 (340)
318 1pqw_A Polyketide synthase; ro 91.2 0.36 1.2E-05 40.4 6.1 43 159-201 35-80 (198)
319 3pvc_A TRNA 5-methylaminomethy 90.6 0.18 6.2E-06 51.2 4.3 132 130-274 14-204 (689)
320 2dph_A Formaldehyde dismutase; 90.4 0.28 9.4E-06 46.2 5.1 43 159-201 182-227 (398)
321 4g81_D Putative hexonate dehyd 90.1 1.3 4.3E-05 39.4 8.9 60 162-225 8-70 (255)
322 3qiv_A Short-chain dehydrogena 90.0 2.4 8.3E-05 36.5 10.7 59 162-225 8-70 (253)
323 3ucx_A Short chain dehydrogena 89.9 3.1 0.00011 36.3 11.4 60 162-225 10-72 (264)
324 3m6i_A L-arabinitol 4-dehydrog 89.9 1.5 5.2E-05 40.4 9.7 45 159-203 176-223 (363)
325 3fpc_A NADP-dependent alcohol 89.9 0.46 1.6E-05 43.8 6.1 44 159-202 163-209 (352)
326 3o38_A Short chain dehydrogena 89.4 2.9 9.8E-05 36.4 10.7 61 162-225 21-85 (266)
327 3tjr_A Short chain dehydrogena 89.3 2.9 0.0001 37.4 11.0 59 162-225 30-92 (301)
328 3jv7_A ADH-A; dehydrogenase, n 89.2 2.1 7.1E-05 39.1 10.0 44 159-202 168-214 (345)
329 3f1l_A Uncharacterized oxidore 88.9 3.6 0.00012 35.6 11.0 57 162-222 11-71 (252)
330 3fwz_A Inner membrane protein 88.9 1.1 3.9E-05 35.3 7.1 69 165-261 9-83 (140)
331 3jyn_A Quinone oxidoreductase; 88.9 0.62 2.1E-05 42.4 6.1 43 160-202 138-183 (325)
332 3lyl_A 3-oxoacyl-(acyl-carrier 88.7 3.3 0.00011 35.5 10.5 59 162-225 4-66 (247)
333 4fs3_A Enoyl-[acyl-carrier-pro 88.6 1.8 6.1E-05 37.9 8.8 61 162-225 5-70 (256)
334 1iy8_A Levodione reductase; ox 88.5 4.3 0.00015 35.4 11.3 61 162-225 12-76 (267)
335 3sx2_A Putative 3-ketoacyl-(ac 88.5 3.9 0.00013 35.8 11.0 59 162-225 12-86 (278)
336 3qwb_A Probable quinone oxidor 88.4 0.79 2.7E-05 41.8 6.5 43 160-202 146-191 (334)
337 3i1j_A Oxidoreductase, short c 88.4 4.4 0.00015 34.6 11.1 57 162-222 13-73 (247)
338 3o26_A Salutaridine reductase; 88.3 2.4 8.1E-05 37.5 9.5 60 162-225 11-74 (311)
339 1kol_A Formaldehyde dehydrogen 88.2 0.65 2.2E-05 43.5 6.0 44 159-202 182-228 (398)
340 1f8f_A Benzyl alcohol dehydrog 88.2 0.61 2.1E-05 43.3 5.7 44 159-202 187-233 (371)
341 3gaf_A 7-alpha-hydroxysteroid 88.2 3.3 0.00011 36.0 10.3 59 162-225 11-73 (256)
342 3sju_A Keto reductase; short-c 88.2 3.3 0.00011 36.5 10.4 59 162-225 23-85 (279)
343 1xg5_A ARPG836; short chain de 88.2 4 0.00014 35.8 10.9 61 162-225 31-95 (279)
344 3nyw_A Putative oxidoreductase 88.1 3.8 0.00013 35.5 10.5 61 162-225 6-71 (250)
345 3rkr_A Short chain oxidoreduct 88.0 3.3 0.00011 36.0 10.1 59 162-225 28-90 (262)
346 3ioy_A Short-chain dehydrogena 87.8 3.6 0.00012 37.2 10.6 61 162-225 7-71 (319)
347 1pl8_A Human sorbitol dehydrog 87.8 0.75 2.6E-05 42.4 6.0 43 159-201 168-213 (356)
348 3grk_A Enoyl-(acyl-carrier-pro 87.7 4.9 0.00017 35.8 11.3 59 162-225 30-93 (293)
349 3pk0_A Short-chain dehydrogena 87.7 3.6 0.00012 35.9 10.2 60 162-225 9-72 (262)
350 3ip1_A Alcohol dehydrogenase, 87.6 1.7 5.9E-05 40.8 8.5 43 160-202 211-256 (404)
351 3r1i_A Short-chain type dehydr 87.4 2.8 9.5E-05 37.1 9.3 59 162-225 31-93 (276)
352 3k31_A Enoyl-(acyl-carrier-pro 87.3 2.4 8.3E-05 37.9 9.0 59 162-225 29-92 (296)
353 3t7c_A Carveol dehydrogenase; 87.3 4.9 0.00017 35.8 11.1 59 162-225 27-101 (299)
354 1yb1_A 17-beta-hydroxysteroid 87.3 5.4 0.00019 34.8 11.2 59 162-225 30-92 (272)
355 3lf2_A Short chain oxidoreduct 87.3 5.4 0.00019 34.7 11.1 60 162-225 7-71 (265)
356 3ftp_A 3-oxoacyl-[acyl-carrier 87.1 3.8 0.00013 36.1 10.1 59 162-225 27-89 (270)
357 3imf_A Short chain dehydrogena 86.9 2.8 9.5E-05 36.5 9.0 59 162-225 5-67 (257)
358 2jah_A Clavulanic acid dehydro 86.8 5.9 0.0002 34.1 11.0 59 162-225 6-68 (247)
359 3v8b_A Putative dehydrogenase, 86.7 4.1 0.00014 36.1 10.2 59 162-225 27-89 (283)
360 3pxx_A Carveol dehydrogenase; 86.7 5.7 0.0002 34.7 11.1 59 162-225 9-83 (287)
361 3llv_A Exopolyphosphatase-rela 86.7 2.3 7.8E-05 33.2 7.6 71 163-261 6-82 (141)
362 3tfo_A Putative 3-oxoacyl-(acy 86.6 4.3 0.00015 35.7 10.1 59 162-225 3-65 (264)
363 3t4x_A Oxidoreductase, short c 86.4 4.4 0.00015 35.4 10.1 60 162-224 9-72 (267)
364 1uuf_A YAHK, zinc-type alcohol 86.3 0.7 2.4E-05 43.0 4.9 44 159-202 191-236 (369)
365 1wly_A CAAR, 2-haloacrylate re 86.3 1.8 6.2E-05 39.3 7.6 43 160-202 143-188 (333)
366 2rhc_B Actinorhodin polyketide 86.1 6.2 0.00021 34.6 11.0 59 162-225 21-83 (277)
367 3two_A Mannitol dehydrogenase; 86.1 0.6 2E-05 42.9 4.3 44 159-202 173-218 (348)
368 3uve_A Carveol dehydrogenase ( 86.1 5.7 0.00019 34.9 10.7 59 162-225 10-88 (286)
369 1qor_A Quinone oxidoreductase; 86.0 1.1 3.8E-05 40.6 6.0 43 160-202 138-183 (327)
370 1fmc_A 7 alpha-hydroxysteroid 86.0 5.8 0.0002 33.9 10.5 58 162-224 10-71 (255)
371 3svt_A Short-chain type dehydr 86.0 5.7 0.00019 34.9 10.7 61 162-225 10-75 (281)
372 1e3j_A NADP(H)-dependent ketos 86.0 1.1 3.7E-05 41.3 6.0 43 159-201 165-209 (352)
373 4fgs_A Probable dehydrogenase 86.0 4.7 0.00016 36.0 10.0 57 162-225 28-87 (273)
374 3tsc_A Putative oxidoreductase 85.9 6.7 0.00023 34.3 11.1 59 162-225 10-85 (277)
375 4eez_A Alcohol dehydrogenase 1 85.7 4.1 0.00014 37.0 9.8 43 159-201 160-205 (348)
376 4dup_A Quinone oxidoreductase; 85.6 1.9 6.5E-05 39.6 7.5 43 160-202 165-210 (353)
377 3pgx_A Carveol dehydrogenase; 85.6 6.3 0.00022 34.6 10.7 59 162-225 14-89 (280)
378 4ibo_A Gluconate dehydrogenase 85.5 3.5 0.00012 36.3 8.9 59 162-225 25-87 (271)
379 3oec_A Carveol dehydrogenase ( 85.5 5.7 0.0002 35.8 10.6 59 162-225 45-119 (317)
380 1xu9_A Corticosteroid 11-beta- 85.3 5.6 0.00019 35.0 10.2 59 162-224 27-89 (286)
381 1xkq_A Short-chain reductase f 85.3 5 0.00017 35.2 9.9 61 162-225 5-70 (280)
382 1geg_A Acetoin reductase; SDR 85.3 7.6 0.00026 33.5 11.0 58 163-225 2-63 (256)
383 3ai3_A NADPH-sorbose reductase 85.2 7.9 0.00027 33.5 11.1 59 162-225 6-69 (263)
384 4dry_A 3-oxoacyl-[acyl-carrier 85.2 4.4 0.00015 35.8 9.5 60 162-225 32-95 (281)
385 1zem_A Xylitol dehydrogenase; 85.1 7 0.00024 33.9 10.7 59 162-225 6-68 (262)
386 3tox_A Short chain dehydrogena 85.0 3 0.0001 37.0 8.3 59 162-225 7-69 (280)
387 3uog_A Alcohol dehydrogenase; 85.0 1.2 4E-05 41.3 5.7 43 160-202 187-231 (363)
388 3vyw_A MNMC2; tRNA wobble urid 84.9 2.3 7.8E-05 38.9 7.4 105 164-292 98-229 (308)
389 1rjw_A ADH-HT, alcohol dehydro 84.8 1.6 5.4E-05 39.9 6.5 43 159-201 161-205 (339)
390 3awd_A GOX2181, putative polyo 84.7 8.5 0.00029 32.9 11.0 59 162-225 12-74 (260)
391 1m6e_X S-adenosyl-L-methionnin 84.6 0.13 4.5E-06 48.3 -1.0 42 164-205 53-112 (359)
392 2eih_A Alcohol dehydrogenase; 84.3 1.5 5.3E-05 40.0 6.2 43 160-202 164-209 (343)
393 3s55_A Putative short-chain de 84.3 8.7 0.0003 33.6 11.0 59 162-225 9-83 (281)
394 1boo_A Protein (N-4 cytosine-s 84.3 0.76 2.6E-05 42.1 4.0 31 214-260 14-44 (323)
395 3rih_A Short chain dehydrogena 84.0 3.3 0.00011 37.1 8.1 60 162-225 40-103 (293)
396 3cxt_A Dehydrogenase with diff 83.9 8.1 0.00028 34.3 10.7 58 162-224 33-94 (291)
397 4fc7_A Peroxisomal 2,4-dienoyl 83.9 7.2 0.00025 34.2 10.3 59 162-225 26-89 (277)
398 3ek2_A Enoyl-(acyl-carrier-pro 83.9 4.1 0.00014 35.3 8.6 60 161-225 12-76 (271)
399 4ej6_A Putative zinc-binding d 83.7 1.5 5.1E-05 40.7 5.9 44 159-202 179-225 (370)
400 4dcm_A Ribosomal RNA large sub 83.6 7.9 0.00027 36.0 10.9 73 162-260 38-111 (375)
401 1xhl_A Short-chain dehydrogena 83.3 7.4 0.00025 34.6 10.2 61 162-225 25-90 (297)
402 3gvc_A Oxidoreductase, probabl 83.3 6.8 0.00023 34.6 9.9 56 162-225 28-87 (277)
403 4da9_A Short-chain dehydrogena 83.2 8.2 0.00028 34.0 10.4 59 162-225 28-91 (280)
404 3tos_A CALS11; methyltransfera 83.1 18 0.00061 31.9 12.4 127 163-310 70-238 (257)
405 3gaz_A Alcohol dehydrogenase s 83.0 3.2 0.00011 37.9 7.7 42 160-202 148-192 (343)
406 2zat_A Dehydrogenase/reductase 82.9 9.4 0.00032 32.9 10.5 58 162-224 13-74 (260)
407 4dmm_A 3-oxoacyl-[acyl-carrier 82.9 8.8 0.0003 33.5 10.4 59 162-225 27-90 (269)
408 4egf_A L-xylulose reductase; s 82.9 6.7 0.00023 34.2 9.6 58 162-224 19-81 (266)
409 3b5i_A S-adenosyl-L-methionine 82.8 1.9 6.4E-05 40.5 6.1 21 163-183 53-73 (374)
410 2ae2_A Protein (tropinone redu 82.7 13 0.00043 32.1 11.3 59 162-225 8-70 (260)
411 1cdo_A Alcohol dehydrogenase; 82.5 1.3 4.4E-05 41.1 4.9 42 160-201 190-234 (374)
412 2b4q_A Rhamnolipids biosynthes 82.5 5.8 0.0002 34.9 9.1 58 162-225 28-89 (276)
413 1vl8_A Gluconate 5-dehydrogena 82.4 12 0.0004 32.7 11.0 58 162-224 20-82 (267)
414 3iup_A Putative NADPH:quinone 82.4 1.8 6.2E-05 40.2 5.9 42 161-202 169-214 (379)
415 1jvb_A NAD(H)-dependent alcoho 82.3 1.7 5.9E-05 39.7 5.6 44 159-202 167-214 (347)
416 1w6u_A 2,4-dienoyl-COA reducta 82.2 11 0.00039 33.1 11.0 59 162-225 25-88 (302)
417 2uvd_A 3-oxoacyl-(acyl-carrier 82.2 10 0.00034 32.5 10.3 59 162-225 3-66 (246)
418 1v3u_A Leukotriene B4 12- hydr 82.1 1.5 5.2E-05 39.8 5.2 41 160-200 143-186 (333)
419 1wma_A Carbonyl reductase [NAD 82.0 11 0.00037 32.3 10.6 59 162-225 3-66 (276)
420 1p0f_A NADP-dependent alcohol 82.0 1.2 4.2E-05 41.2 4.6 43 159-201 188-233 (373)
421 3goh_A Alcohol dehydrogenase, 81.9 0.88 3E-05 41.1 3.4 42 160-202 140-183 (315)
422 1vj0_A Alcohol dehydrogenase, 81.9 1.8 6.2E-05 40.2 5.7 42 160-201 193-237 (380)
423 4gkb_A 3-oxoacyl-[acyl-carrier 81.9 5.3 0.00018 35.3 8.4 59 162-225 6-67 (258)
424 2h6e_A ADH-4, D-arabinose 1-de 81.8 1.7 5.7E-05 39.8 5.3 43 159-202 168-214 (344)
425 2gdz_A NAD+-dependent 15-hydro 81.8 8.6 0.0003 33.3 9.9 61 162-225 6-70 (267)
426 3afn_B Carbonyl reductase; alp 81.6 7 0.00024 33.3 9.1 59 162-225 6-69 (258)
427 2jhf_A Alcohol dehydrogenase E 81.6 1.5 5E-05 40.7 4.9 42 160-201 189-233 (374)
428 1yxm_A Pecra, peroxisomal tran 81.6 12 0.00041 32.9 10.9 63 162-225 17-84 (303)
429 1e3i_A Alcohol dehydrogenase, 81.5 1.5 5E-05 40.7 4.9 42 160-201 193-237 (376)
430 4imr_A 3-oxoacyl-(acyl-carrier 81.5 6.4 0.00022 34.6 9.0 58 162-224 32-93 (275)
431 3ic5_A Putative saccharopine d 81.4 9.5 0.00032 28.0 8.8 71 163-260 5-80 (118)
432 2c0c_A Zinc binding alcohol de 81.4 1.9 6.6E-05 39.8 5.6 44 159-202 160-206 (362)
433 1e7w_A Pteridine reductase; di 81.4 9.2 0.00031 33.8 10.0 58 162-224 8-71 (291)
434 2qq5_A DHRS1, dehydrogenase/re 81.3 10 0.00036 32.6 10.2 59 162-225 4-66 (260)
435 2fzw_A Alcohol dehydrogenase c 81.3 1.4 4.7E-05 40.8 4.6 42 160-201 188-232 (373)
436 1g60_A Adenine-specific methyl 81.3 1 3.5E-05 39.8 3.5 31 214-260 4-34 (260)
437 4b7c_A Probable oxidoreductase 81.3 1.2 4.3E-05 40.4 4.2 42 159-200 146-190 (336)
438 4e6p_A Probable sorbitol dehyd 81.2 11 0.00039 32.4 10.4 56 162-225 7-66 (259)
439 1piw_A Hypothetical zinc-type 81.2 1.2 4E-05 41.1 4.1 44 159-202 176-221 (360)
440 3h7a_A Short chain dehydrogena 81.1 2.7 9.2E-05 36.5 6.2 59 162-225 6-68 (252)
441 2hcy_A Alcohol dehydrogenase 1 81.1 1.4 4.6E-05 40.5 4.4 44 159-202 166-212 (347)
442 1iz0_A Quinone oxidoreductase; 81.0 0.89 3E-05 40.8 3.1 42 160-201 123-167 (302)
443 4eso_A Putative oxidoreductase 80.9 10 0.00034 32.9 9.9 56 162-225 7-66 (255)
444 4iin_A 3-ketoacyl-acyl carrier 80.9 11 0.00039 32.7 10.3 59 162-225 28-91 (271)
445 1eg2_A Modification methylase 80.8 1.4 4.7E-05 40.4 4.3 31 214-260 38-69 (319)
446 3l77_A Short-chain alcohol deh 80.7 8.8 0.0003 32.4 9.4 58 163-225 2-64 (235)
447 3uko_A Alcohol dehydrogenase c 80.7 0.88 3E-05 42.3 3.0 42 160-201 191-235 (378)
448 2j3h_A NADP-dependent oxidored 80.7 1.5 5.2E-05 40.0 4.6 42 160-201 153-197 (345)
449 3a28_C L-2.3-butanediol dehydr 80.6 8.6 0.00029 33.2 9.4 58 163-225 2-65 (258)
450 1ja9_A 4HNR, 1,3,6,8-tetrahydr 80.5 13 0.00043 32.1 10.5 59 162-225 20-83 (274)
451 3rwb_A TPLDH, pyridoxal 4-dehy 80.4 9.6 0.00033 32.7 9.6 56 162-225 5-64 (247)
452 3n74_A 3-ketoacyl-(acyl-carrie 80.4 13 0.00045 31.9 10.5 56 162-225 8-67 (261)
453 1ae1_A Tropinone reductase-I; 80.3 21 0.00073 30.9 12.0 59 162-225 20-82 (273)
454 4a2c_A Galactitol-1-phosphate 80.3 7 0.00024 35.4 9.0 44 159-202 157-203 (346)
455 3qlj_A Short chain dehydrogena 80.3 5.8 0.0002 35.7 8.4 59 162-225 26-98 (322)
456 3v2h_A D-beta-hydroxybutyrate 80.2 14 0.00046 32.5 10.7 60 162-225 24-88 (281)
457 1mxh_A Pteridine reductase 2; 80.2 16 0.00056 31.6 11.2 58 162-224 10-73 (276)
458 1gee_A Glucose 1-dehydrogenase 80.0 12 0.0004 32.1 10.0 59 162-225 6-69 (261)
459 3fbg_A Putative arginate lyase 79.9 6.5 0.00022 35.8 8.7 41 162-202 150-193 (346)
460 3oid_A Enoyl-[acyl-carrier-pro 79.9 12 0.00041 32.4 10.1 59 162-225 3-66 (258)
461 3edm_A Short chain dehydrogena 79.3 9.8 0.00034 32.9 9.3 59 162-225 7-70 (259)
462 3zv4_A CIS-2,3-dihydrobiphenyl 79.2 10 0.00035 33.3 9.5 56 162-225 4-63 (281)
463 3sc4_A Short chain dehydrogena 78.9 7.4 0.00025 34.3 8.5 59 162-225 8-77 (285)
464 2g1p_A DNA adenine methylase; 78.9 2 6.9E-05 38.5 4.7 42 155-198 20-61 (278)
465 2qhx_A Pteridine reductase 1; 78.8 12 0.00041 33.9 10.0 58 162-224 45-108 (328)
466 3oig_A Enoyl-[acyl-carrier-pro 78.6 15 0.0005 31.7 10.3 60 162-224 6-70 (266)
467 2dpm_A M.dpnii 1, protein (ade 78.6 2.3 7.9E-05 38.3 5.0 43 156-200 28-71 (284)
468 3ppi_A 3-hydroxyacyl-COA dehyd 78.6 11 0.00039 32.8 9.6 56 162-225 29-88 (281)
469 1yb5_A Quinone oxidoreductase; 78.6 2.4 8.1E-05 39.0 5.2 42 160-201 168-212 (351)
470 2c07_A 3-oxoacyl-(acyl-carrier 78.5 16 0.00055 31.9 10.6 59 162-225 43-105 (285)
471 2pnf_A 3-oxoacyl-[acyl-carrier 78.5 17 0.00058 30.7 10.5 58 162-224 6-68 (248)
472 4dqx_A Probable oxidoreductase 78.3 15 0.00052 32.2 10.4 56 162-225 26-85 (277)
473 3ijr_A Oxidoreductase, short c 78.3 13 0.00043 32.9 9.9 59 162-225 46-109 (291)
474 4eye_A Probable oxidoreductase 78.2 1.5 5.2E-05 40.1 3.8 43 160-202 157-202 (342)
475 1edo_A Beta-keto acyl carrier 78.1 18 0.00061 30.5 10.5 57 164-225 2-63 (244)
476 2cfc_A 2-(R)-hydroxypropyl-COM 77.7 12 0.00042 31.7 9.4 59 163-225 2-64 (250)
477 3rku_A Oxidoreductase YMR226C; 77.6 10 0.00035 33.6 9.1 61 162-225 32-99 (287)
478 3uf0_A Short-chain dehydrogena 77.2 9.1 0.00031 33.6 8.5 58 162-225 30-91 (273)
479 4e3z_A Putative oxidoreductase 77.1 15 0.00051 31.8 9.9 60 161-225 24-88 (272)
480 3l6e_A Oxidoreductase, short-c 77.1 15 0.00052 31.2 9.8 55 163-225 3-61 (235)
481 2z1n_A Dehydrogenase; reductas 77.1 24 0.00081 30.3 11.2 61 162-225 6-70 (260)
482 3gk3_A Acetoacetyl-COA reducta 77.1 14 0.00048 32.0 9.7 59 162-225 24-87 (269)
483 3r3s_A Oxidoreductase; structu 76.9 15 0.0005 32.6 9.9 59 162-225 48-112 (294)
484 3tzq_B Short-chain type dehydr 76.9 9.4 0.00032 33.3 8.5 56 162-225 10-69 (271)
485 2x9g_A PTR1, pteridine reducta 76.7 9.8 0.00034 33.4 8.6 58 162-224 22-85 (288)
486 1x1t_A D(-)-3-hydroxybutyrate 76.6 13 0.00046 31.9 9.4 59 162-225 3-67 (260)
487 1spx_A Short-chain reductase f 76.5 10 0.00034 33.0 8.6 62 162-225 5-70 (278)
488 3l4b_C TRKA K+ channel protien 76.5 6.6 0.00023 33.1 7.2 45 171-224 6-54 (218)
489 1zk4_A R-specific alcohol dehy 76.4 12 0.00041 31.8 8.9 57 162-224 5-65 (251)
490 2zig_A TTHA0409, putative modi 76.4 0.94 3.2E-05 40.8 1.7 31 214-260 21-51 (297)
491 3e03_A Short chain dehydrogena 76.2 10 0.00035 33.1 8.6 59 162-225 5-74 (274)
492 3osu_A 3-oxoacyl-[acyl-carrier 76.0 20 0.0007 30.5 10.4 58 163-225 4-66 (246)
493 3is3_A 17BETA-hydroxysteroid d 75.9 18 0.00063 31.3 10.2 59 162-225 17-80 (270)
494 3grp_A 3-oxoacyl-(acyl carrier 75.7 18 0.00061 31.5 10.0 56 162-225 26-85 (266)
495 4dyv_A Short-chain dehydrogena 75.5 14 0.00047 32.4 9.2 56 162-225 27-86 (272)
496 2bgk_A Rhizome secoisolaricire 75.4 16 0.00055 31.5 9.6 58 162-225 15-76 (278)
497 3ged_A Short-chain dehydrogena 75.3 15 0.0005 32.2 9.2 54 164-225 3-59 (247)
498 2j8z_A Quinone oxidoreductase; 75.3 2.8 9.7E-05 38.4 4.8 42 160-201 160-204 (354)
499 1rjd_A PPM1P, carboxy methyl t 75.3 7.7 0.00026 35.6 7.7 63 162-225 97-179 (334)
500 2hq1_A Glucose/ribitol dehydro 75.2 15 0.00053 31.0 9.3 59 162-225 4-67 (247)
No 1
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=100.00 E-value=9e-45 Score=334.52 Aligned_cols=240 Identities=29% Similarity=0.455 Sum_probs=201.5
Q ss_pred ChHHHHHhccCCC---CCCceeEEECCEEEEEeCchhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcccccceeeEEccC
Q psy16898 46 SAEDILKAILPDN---VAMSSFTSVGHIVHCNLREELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRNFQMELLAGK 122 (324)
Q Consensus 46 ~~~~~l~~~~p~~---~~~~~~d~~G~i~vi~~~~~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~~~~~~l~G~ 122 (324)
+.+++|+..+|++ .+|++||++||++++++++++.++++.|++++++. +++++|+.+. .+.+.+|.+++++|+|+
T Consensus 9 ~~~e~l~~~lp~~l~~~~P~~~e~~Gdi~il~~~~~~~~~~~~i~~~l~~~-~~vk~V~~k~-~i~g~~R~~~~e~L~G~ 86 (278)
T 3k6r_A 9 RIREILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEV-LGVKTVLRKG-HIHGETRKPDYELLYGS 86 (278)
T ss_dssp HHHHHHTTTSCGGGGGGSCSCCEEETTEEEECC-CTTGGGHHHHHHHHHHH-HTCSEEEECC-----------CEEEECS
T ss_pred HHHHHHhhhCChhHHhhCCCCceEECCEEEEeCChhHhHHHHHHHHHHHhc-cCCeEEEEeC-CcCCccccccceEEecC
Confidence 4678999999987 69999999999999999999999999999999987 4699999884 56788999999999999
Q ss_pred CCeEEEEEeCCeEEEEeccceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHH
Q psy16898 123 DCMVTMHKENGCTFKMDFSKVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 123 ~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~ 201 (324)
+ +++.++|||++|.+|++++||++++.+||.++.+.+++|++|||+|||+|+||+++|++|+ +|+|+|+||.|++.++
T Consensus 87 ~-~~~~~~E~G~~~~~D~~k~~f~~~~~~er~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~ 165 (278)
T 3k6r_A 87 D-TVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp C-CEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHH
T ss_pred C-cEEEEEECCEEEEEeccceEEcCCcHHHHHHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHH
Confidence 7 6788999999999999999999999999999999999999999999999999999999875 9999999999999999
Q ss_pred HHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCC
Q psy16898 202 ASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLS 280 (324)
Q Consensus 202 ~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~ 280 (324)
+|+++|+ +.++++++++|++++..+ ..||+|+||||..+.+|++.+.. ++++
T Consensus 166 ~N~~~N~--v~~~v~~~~~D~~~~~~~-------------------~~~D~Vi~~~p~~~~~~l~~a~~~lk~g------ 218 (278)
T 3k6r_A 166 ENIHLNK--VEDRMSAYNMDNRDFPGE-------------------NIADRILMGYVVRTHEFIPKALSIAKDG------ 218 (278)
T ss_dssp HHHHHTT--CTTTEEEECSCTTTCCCC-------------------SCEEEEEECCCSSGGGGHHHHHHHEEEE------
T ss_pred HHHHHcC--CCCcEEEEeCcHHHhccc-------------------cCCCEEEECCCCcHHHHHHHHHHHcCCC------
Confidence 9999999 988899999999876432 35999999999999999998877 7765
Q ss_pred CCCEEEEEEcccCCCh------hHHh---------------HhhhcCCCceEEEEeec
Q psy16898 281 RPPVLYLYCFLPKMDL------ETKK---------------KIKSYDPSYATLIRGIR 317 (324)
Q Consensus 281 ~~g~vh~y~f~~~~~~------~~~~---------------~v~~y~~~~~~~i~~~~ 317 (324)
|++|+|+|.+.++. ...+ .|++|+|+.++.|++++
T Consensus 219 --G~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~~~hvv~D~~ 274 (278)
T 3k6r_A 219 --AIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPGVWHVVLDLR 274 (278)
T ss_dssp --EEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTTEEEEEEEEE
T ss_pred --CEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEEEEEEeECcCccEEEEEEE
Confidence 99999999875321 1111 14567788888777775
No 2
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=100.00 E-value=3.3e-35 Score=270.98 Aligned_cols=216 Identities=29% Similarity=0.450 Sum_probs=172.9
Q ss_pred CChHHHHHhccCCC---CCCceeEEECCEEEEEeCchhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcccccceeeEEcc
Q psy16898 45 FSAEDILKAILPDN---VAMSSFTSVGHIVHCNLREELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRNFQMELLAG 121 (324)
Q Consensus 45 ~~~~~~l~~~~p~~---~~~~~~d~~G~i~vi~~~~~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~~~~~~l~G 121 (324)
++.+++|+.++|++ .+|.+||+|||+++++++.++.++++.|+++|.+.+ ++++|+.+ +...+..++.+.++++|
T Consensus 8 ~~~~~~~~~~~~~~~~d~lp~~~d~~g~~~vv~~~~~~~~~~~~i~~~l~~~~-~~~~i~~~-~~~~~~~~~~~~~~l~G 85 (278)
T 2frn_A 8 PRIREILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEVL-GVKTVLRK-GHIHGETRKPDYELLYG 85 (278)
T ss_dssp -----------CCCTTTCSCSCCEEETTEEECC--CCSCSCCTHHHHHHHHHH-TCSEEEEC-C----------CEEEEC
T ss_pred CCHHHHHHhhCChhHhhhcCceEEEECCEEEEeCChhHHHHHHHHHHHHHHhc-CCCEEEEe-CCccCCccccceEEEEC
Confidence 46789999999988 489999999999999997678889999999999988 69999999 44566777788899999
Q ss_pred CCCeEEEEEeCCeEEEEeccceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHH
Q psy16898 122 KDCMVTMHKENGCTFKMDFSKVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWL 200 (324)
Q Consensus 122 ~~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a 200 (324)
++ ..+.+.|+|++|.+|+..+||+++...++.++.+.+++|++|||+|||+|.+++.+|+.|+ +|+|+|+|+.|++.|
T Consensus 86 ~~-~~~~~~e~g~~f~~d~~~~~f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a 164 (278)
T 2frn_A 86 SD-TVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFL 164 (278)
T ss_dssp SC-CEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHH
T ss_pred CC-CEEEEEECCEEEEEEccceeEcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 85 6677789999999999999999998888888888888899999999999999999999887 799999999999999
Q ss_pred HHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCC
Q psy16898 201 QASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKL 279 (324)
Q Consensus 201 ~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~ 279 (324)
++|++.|+ +.++++++++|+.++.. ...||+|++|||.....+++.+.. |+++
T Consensus 165 ~~n~~~n~--~~~~v~~~~~D~~~~~~-------------------~~~fD~Vi~~~p~~~~~~l~~~~~~Lkpg----- 218 (278)
T 2frn_A 165 VENIHLNK--VEDRMSAYNMDNRDFPG-------------------ENIADRILMGYVVRTHEFIPKALSIAKDG----- 218 (278)
T ss_dssp HHHHHHTT--CTTTEEEECSCTTTCCC-------------------CSCEEEEEECCCSSGGGGHHHHHHHEEEE-----
T ss_pred HHHHHHcC--CCceEEEEECCHHHhcc-------------------cCCccEEEECCchhHHHHHHHHHHHCCCC-----
Confidence 99999999 88679999999987644 135999999999887788887766 7775
Q ss_pred CCCCEEEEEEccc
Q psy16898 280 SRPPVLYLYCFLP 292 (324)
Q Consensus 280 ~~~g~vh~y~f~~ 292 (324)
|+++++++++
T Consensus 219 ---G~l~~~~~~~ 228 (278)
T 2frn_A 219 ---AIIHYHNTVP 228 (278)
T ss_dssp ---EEEEEEEEEE
T ss_pred ---eEEEEEEeec
Confidence 9999999886
No 3
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=100.00 E-value=1.6e-34 Score=273.37 Aligned_cols=238 Identities=29% Similarity=0.435 Sum_probs=197.3
Q ss_pred ceeEEEEe-eccC-CChHHHHHhccCCC----CCCceeEEECCEEEEEeCchhhhh-HHHHHHHHHhhCCCceEEEEcCC
Q psy16898 33 FTHAEVLL-TYDN-FSAEDILKAILPDN----VAMSSFTSVGHIVHCNLREELIEH-KFIIGRVLLDKVPSCETVVNKAH 105 (324)
Q Consensus 33 ~~~~~~~~-~y~~-~~~~~~l~~~~p~~----~~~~~~d~~G~i~vi~~~~~~~~~-~~~I~~~l~~~~~~i~~V~~k~~ 105 (324)
++.+++.. .|.. ++.+++|+.++|++ ++|.++|+||+++++++.+...++ ++.|+++|.+.+|. ++|+.+.+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~d~~g~~~vv~~~~~~~~~~~~~i~~~l~~~~~~-~~v~~~~~ 138 (336)
T 2yx1_A 60 LVDKELEEKKIIKKPSFREIISKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPC-KGVFRRKS 138 (336)
T ss_dssp EEECCCCCC-----CCSHHHHHHHTHHHHTTSSBCSCCEEETTEEEECBCSCSCHHHHHHHHHHHHHHSCC-SEEEEEC-
T ss_pred EEEeecccccccccCCHHHHHhhhCCchhccccCCceEEEECCEEEEecCcchhhhHHHHHHHHHHHHCCC-cEEEEcCC
Confidence 55666666 6664 59999999999952 799999999999999987765555 88999999999987 99999875
Q ss_pred CCCcccccceeeEEccCCCeEEEEEeCCeEEEEeccceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCC
Q psy16898 106 TIDNTYRNFQMELLAGKDCMVTMHKENGCTFKMDFSKVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGA 185 (324)
Q Consensus 106 ~~~~~~~~~~~~~l~G~~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~ 185 (324)
.+.+.+++...++++|+....+.++|+|++|.+|+.++||+++.++++.++.+.+.+|++|||+|||+|.+++. |+.++
T Consensus 139 ~~~g~~r~~~~~~l~G~~~~~~~~~e~g~~f~~d~~~~~~~~~~~~er~~i~~~~~~~~~VLDlg~G~G~~~l~-a~~~~ 217 (336)
T 2yx1_A 139 EVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIA-CKNAK 217 (336)
T ss_dssp ------CCCCEEEEEECCCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHHHCCTTCEEEETTCTTSHHHHH-TTTSS
T ss_pred CCCCcccccceEEEeCCCCcEEEEEECCEEEEEehHHhccCCccHHHHHHHHHhcCCCCEEEEccCccCHHHHh-ccCCC
Confidence 56778888888999998766778899999999999999999999999998888888999999999999999999 88666
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHH
Q psy16898 186 IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYV 265 (324)
Q Consensus 186 ~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l 265 (324)
+|+|+|+|+.|++.|++|++.|+ +.++++++++|+.+++ ..||+|++|||..+..++
T Consensus 218 ~V~~vD~s~~ai~~a~~n~~~n~--l~~~v~~~~~D~~~~~---------------------~~fD~Vi~dpP~~~~~~l 274 (336)
T 2yx1_A 218 KIYAIDINPHAIELLKKNIKLNK--LEHKIIPILSDVREVD---------------------VKGNRVIMNLPKFAHKFI 274 (336)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCC---------------------CCEEEEEECCTTTGGGGH
T ss_pred EEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECChHHhc---------------------CCCcEEEECCcHhHHHHH
Confidence 99999999999999999999999 8668999999998865 139999999999888888
Q ss_pred HHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhh
Q psy16898 266 RYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKS 304 (324)
Q Consensus 266 ~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~ 304 (324)
+.+.. ++++ |++++++|++. .....+.++.
T Consensus 275 ~~~~~~L~~g--------G~l~~~~~~~~-~~~~~~~l~~ 305 (336)
T 2yx1_A 275 DKALDIVEEG--------GVIHYYTIGKD-FDKAIKLFEK 305 (336)
T ss_dssp HHHHHHEEEE--------EEEEEEEEESS-SHHHHHHHHH
T ss_pred HHHHHHcCCC--------CEEEEEEeecC-chHHHHHHHH
Confidence 88877 6665 99999999988 5545544443
No 4
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.6e-32 Score=252.40 Aligned_cols=212 Identities=25% Similarity=0.428 Sum_probs=149.0
Q ss_pred ChHHHHHhccCCC-CCCceeEEECCEEEEEeCchhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcccccceeeEEccCCC
Q psy16898 46 SAEDILKAILPDN-VAMSSFTSVGHIVHCNLREELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRNFQMELLAGKDC 124 (324)
Q Consensus 46 ~~~~~l~~~~p~~-~~~~~~d~~G~i~vi~~~~~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~~~~~~l~G~~~ 124 (324)
-++.-|.-++|.. ++|++||+|||++++++.+... .| ++|++. |++++|+++.+...+.+++...++++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~d~~g~~~v~~~~~~~~----~i-~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~l~G~~- 81 (272)
T 3a27_A 9 HHSSGLEVLFQGPLHMGIKYQKIGDVVIVKKELSED----EI-REIVKR-TKCKAILLYTTQITGEFRTPHVKILYGKE- 81 (272)
T ss_dssp ------------------CCEEETTEEEC-----------------------CCSEEEEC----------CCEEEECSC-
T ss_pred cccCceEEEccCCCCCCCcceEECCEEEEeCCchHH----HH-HHHHhC-CCceEEEEcCCCCCCcccccceEEEeCCC-
Confidence 4555678888888 9999999999999999876542 67 888887 88999999987666777788899999997
Q ss_pred eEEEEEeCCeEEEEeccceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHH
Q psy16898 125 MVTMHKENGCTFKMDFSKVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 125 ~~~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~ 202 (324)
..+.++|+|++|.+++..|||+++..+|+++++..+.++++|||+|||+|.+++.+|+++ ++|+|+|+|+.|++.|++
T Consensus 82 ~~~~~~e~g~~f~~~~~~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~ 161 (272)
T 3a27_A 82 TETIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE 161 (272)
T ss_dssp CEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH
T ss_pred cEEEEEECCEEEEEechhEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Confidence 556678999999999999999999999999888888899999999999999999999974 499999999999999999
Q ss_pred HHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCC
Q psy16898 203 SIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSR 281 (324)
Q Consensus 203 N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~ 281 (324)
|++.|+ +. ++.++++|+.++ .. ...||+|++|||.....++..+.. ++++
T Consensus 162 n~~~n~--l~-~~~~~~~d~~~~-~~------------------~~~~D~Vi~d~p~~~~~~l~~~~~~Lkpg------- 212 (272)
T 3a27_A 162 NIKLNK--LN-NVIPILADNRDV-EL------------------KDVADRVIMGYVHKTHKFLDKTFEFLKDR------- 212 (272)
T ss_dssp HHHHTT--CS-SEEEEESCGGGC-CC------------------TTCEEEEEECCCSSGGGGHHHHHHHEEEE-------
T ss_pred HHHHcC--CC-CEEEEECChHHc-Cc------------------cCCceEEEECCcccHHHHHHHHHHHcCCC-------
Confidence 999999 87 799999999876 32 135999999999866667777655 7765
Q ss_pred CCEEEEEEcccCC
Q psy16898 282 PPVLYLYCFLPKM 294 (324)
Q Consensus 282 ~g~vh~y~f~~~~ 294 (324)
|+++++|+...+
T Consensus 213 -G~l~~s~~~~~~ 224 (272)
T 3a27_A 213 -GVIHYHETVAEK 224 (272)
T ss_dssp -EEEEEEEEEEGG
T ss_pred -CEEEEEEcCccc
Confidence 899999998854
No 5
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.97 E-value=4e-29 Score=240.60 Aligned_cols=238 Identities=18% Similarity=0.168 Sum_probs=176.8
Q ss_pred eeEEECCEEEEEeC-chhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcccccceeeEEccC-CCeEEEEEeCCeEEEEec
Q psy16898 63 SFTSVGHIVHCNLR-EELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRNFQMELLAGK-DCMVTMHKENGCTFKMDF 140 (324)
Q Consensus 63 ~~d~~G~i~vi~~~-~~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~~~~~~l~G~-~~~~~~~~e~g~~f~id~ 140 (324)
.+|+||+++++++. ..+.++++.|+++|.+.+|++++|+.+.+...+ +...++++|+ .+..+.+.|+|++|.+++
T Consensus 111 ~vd~~g~~~vv~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~---~~~~~~l~G~~~~~~~~v~e~g~~f~v~~ 187 (385)
T 2b78_A 111 TIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKIRFKGI---DNVSAHLYGQEAPEQFLILENGISYNVFL 187 (385)
T ss_dssp EEEEETTEEEEEECSHHHHHTHHHHHHHHHHHSTTCSEEEEEECC-------CCEEEEEESCCCSSEEEEETTEEEEECS
T ss_pred EEEEECCEEEEEECcHHHHHhHHHHHHHHHHHhCCCCEEEEechhhcC---CccceeecCCCCCceEEEEECCEEEEEec
Confidence 46789999999975 456788899999999988889999998665433 4567889998 333355678999999999
Q ss_pred c-----ceeecCcChHHHHHHHhhc-cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCC
Q psy16898 141 S-----KVYWNSRLSTEHERVTKEV-REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKT 213 (324)
Q Consensus 141 ~-----~~f~~~r~~~e~~~~~~~~-~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~ 213 (324)
. .||++++ +.+.++... .+|++|||+|||+|.+++.+|+.|+ +|+|+|+|+.|++.|++|++.|+ +.+
T Consensus 188 ~~~~~t~ff~~~~---~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~--~~~ 262 (385)
T 2b78_A 188 NDGLMTGIFLDQR---QVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANH--LDM 262 (385)
T ss_dssp SSSSCCSSCGGGH---HHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTT--CCC
T ss_pred cccccCCcCCcHH---HHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCc
Confidence 8 7888887 444555554 7889999999999999999999877 99999999999999999999999 875
Q ss_pred -CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhH------HHHHHHhccchhhcCCCCCCCEEE
Q psy16898 214 -PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAV------EYVRYLKVLTREEFGKLSRPPVLY 286 (324)
Q Consensus 214 -~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~------~~l~~~~~l~~~~~~~~~~~g~vh 286 (324)
+++++++|+.+++...... +..||+|++|||+.+. ..++.+..+-......++++|++.
T Consensus 263 ~~v~~~~~D~~~~l~~~~~~--------------~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~ 328 (385)
T 2b78_A 263 ANHQLVVMDVFDYFKYARRH--------------HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLII 328 (385)
T ss_dssp TTEEEEESCHHHHHHHHHHT--------------TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred cceEEEECCHHHHHHHHHHh--------------CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 8999999999987654321 2459999999999531 112221110000011233458998
Q ss_pred EEEcccCC-ChhHHhHhhhc--CCCceEEEEeecccCCCCC
Q psy16898 287 LYCFLPKM-DLETKKKIKSY--DPSYATLIRGIRRLSSDGP 324 (324)
Q Consensus 287 ~y~f~~~~-~~~~~~~v~~y--~~~~~~~i~~~~~~~~d~~ 324 (324)
+.|+.... .+.+.+.++.. ..+.. +++...+++|||
T Consensus 329 ~~~~~~~~~~~~~~~~i~~~~~~~g~~--~~~~~~~~~D~p 367 (385)
T 2b78_A 329 ASTNAANMTVSQFKKQIEKGFGKQKHT--YLDLQQLPSDFA 367 (385)
T ss_dssp EEECCTTSCHHHHHHHHHHHHTTCCCE--EEEEECCCTTSC
T ss_pred EEeCCCcCCHHHHHHHHHHHHHHcCCc--EEEeCCCCCCCC
Confidence 88877764 44566666443 23344 889999999998
No 6
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.97 E-value=5.5e-29 Score=240.02 Aligned_cols=230 Identities=20% Similarity=0.258 Sum_probs=179.5
Q ss_pred ceeEEECCEEEEEeCc-hhhhhHHHHHHHHHhhCCCceEEEEcCCCCCccccc--ceeeEEccCCCeEEEEEeCCeEEEE
Q psy16898 62 SSFTSVGHIVHCNLRE-ELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRN--FQMELLAGKDCMVTMHKENGCTFKM 138 (324)
Q Consensus 62 ~~~d~~G~i~vi~~~~-~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~--~~~~~l~G~~~~~~~~~e~g~~f~i 138 (324)
-.+|+||+++++++.+ .+..+++.|.++|.+.++ +++|+.|.+...+..++ ...++++|+.+..+.+.|+|++|.+
T Consensus 109 l~vD~y~~~~vvq~~~~~~~~~~~~i~~al~~~~~-~~~i~~k~~~~~r~~~g~~~~~~~l~G~~~~~~~v~E~g~~f~v 187 (393)
T 4dmg_A 109 LVVDRFGEVLVLQVRSRGMEALREVWLPALLEVVA-PKGVYERSDVEARRQEGLPERVGVVYGEVPEVLEVEEDGLRFPI 187 (393)
T ss_dssp EEEEEETTEEEEEECSHHHHHTHHHHHHHHHHHHC-CSEEEECCCHHHHHHTTCCCCCEEEEECCCSEEEEEETTEEEEE
T ss_pred EEEEEECCEEEEEECcHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcchHhhcCCCcccceEecCCCCcEEEEECCEEEEE
Confidence 4789999999999855 578899999999999886 89999997642222222 2567899987677888999999999
Q ss_pred eccc-----eeecCcChHHHHHHHhh-ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC
Q psy16898 139 DFSK-----VYWNSRLSTEHERVTKE-VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVK 212 (324)
Q Consensus 139 d~~~-----~f~~~r~~~e~~~~~~~-~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~ 212 (324)
|+.. +|++++ +.+.++.. .++|++|||+|||+|.+++.+|+.|+.|+|+|+|+.|++.|++|++.|+ +.
T Consensus 188 d~~~~~~tG~f~dqr---~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng--~~ 262 (393)
T 4dmg_A 188 PLALAQKTGYYLDQR---ENRRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLG--LR 262 (393)
T ss_dssp ETTTCCTTSSCGGGH---HHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CC
T ss_pred echhccccCcCCCHH---HHHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhC--CC
Confidence 9887 899988 55555554 4459999999999999999999999899999999999999999999999 86
Q ss_pred CCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-------------HHHHHHHhc-cchhhcCC
Q psy16898 213 TPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-------------VEYVRYLKV-LTREEFGK 278 (324)
Q Consensus 213 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-------------~~~l~~~~~-l~~~~~~~ 278 (324)
..+.++|+.+++.... +. ||.|++|||..+ ..++..+.. +++
T Consensus 263 --~~~~~~D~~~~l~~~~----------------~~-fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~Lkp----- 318 (393)
T 4dmg_A 263 --VDIRHGEALPTLRGLE----------------GP-FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAE----- 318 (393)
T ss_dssp --CEEEESCHHHHHHTCC----------------CC-EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEE-----
T ss_pred --CcEEEccHHHHHHHhc----------------CC-CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 3567999999875420 23 999999999843 133333333 444
Q ss_pred CCCCCEEEEEEcccC-CChhHHhHhhh--cCCCceEEEEeecccCCCCC
Q psy16898 279 LSRPPVLYLYCFLPK-MDLETKKKIKS--YDPSYATLIRGIRRLSSDGP 324 (324)
Q Consensus 279 ~~~~g~vh~y~f~~~-~~~~~~~~v~~--y~~~~~~~i~~~~~~~~d~~ 324 (324)
||++++++++.. ++..+.+.++. -..+...++++...+++|||
T Consensus 319 ---GG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~~~~~~DhP 364 (393)
T 4dmg_A 319 ---EGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRVTYQPEDHP 364 (393)
T ss_dssp ---EEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEEEECCTTSC
T ss_pred ---CCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEEcCCCCCCC
Confidence 588886666555 45555666643 23567789999999999998
No 7
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.96 E-value=2.8e-27 Score=228.34 Aligned_cols=234 Identities=16% Similarity=0.181 Sum_probs=180.8
Q ss_pred eeEEECCEEEEEeCc-hhhhhHHHHHHHHHhhCCCceEEEEcCCCCCccc--ccceeeEEccCCC-eEEEEEeCCeEEEE
Q psy16898 63 SFTSVGHIVHCNLRE-ELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTY--RNFQMELLAGKDC-MVTMHKENGCTFKM 138 (324)
Q Consensus 63 ~~d~~G~i~vi~~~~-~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~--~~~~~~~l~G~~~-~~~~~~e~g~~f~i 138 (324)
.+|+||+++++++.. .+.++++.|+++|.+.+ ++++|+.+.+...+.. .+...++++|+.+ ..+.+.++|++|.+
T Consensus 116 ~vd~~g~~~v~~~~~~~~~~~~~~i~~~l~~~~-~~~~i~~~~~~~~~~~~g~~~~~~~l~G~~~~~~~~~~~~g~~f~v 194 (396)
T 3c0k_A 116 TIDRFGNFLVLQLLSAGAEYQRAALISALQTLY-PECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLV 194 (396)
T ss_dssp EEEEETTEEEEEECSHHHHHTHHHHHHHHHHHC-TTSEEEEEECCTHHHHTTCCCEEEEEESCCCCSSEEEEETTEEEEE
T ss_pred EEEEECCEEEEEECCHHHHHHHHHHHHHHHHhc-CCCEEEEeCCchhHhhcCCCccceeEcCCCCCceEEEEECCEEEEE
Confidence 357899999999754 56778899999999887 5899999843222211 2336788999864 34667899999999
Q ss_pred ecc-----ceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCC-
Q psy16898 139 DFS-----KVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQV- 211 (324)
Q Consensus 139 d~~-----~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l- 211 (324)
++. .||++++ +.+.++..+.++++|||+|||+|++++.+|+.|+ +|+|+|+|+.+++.|++|++.|+ +
T Consensus 195 ~~~~~~~tgff~~~~---~~~~~l~~~~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ng--l~ 269 (396)
T 3c0k_A 195 DIQHGHKTGYYLDQR---DSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNK--LD 269 (396)
T ss_dssp CTTTSSTTSSCGGGH---HHHHHHHHHCTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CC
T ss_pred eccccccCCcCcCHH---HHHHHHHHhhCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CC
Confidence 998 7999888 5555566567899999999999999999999876 99999999999999999999999 8
Q ss_pred CCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-------------HHHHHHHhc-cchhhcC
Q psy16898 212 KTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-------------VEYVRYLKV-LTREEFG 277 (324)
Q Consensus 212 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-------------~~~l~~~~~-l~~~~~~ 277 (324)
.++++++++|+.+++...... +..||.|++|||+.+ ..++..+.. ++++
T Consensus 270 ~~~v~~~~~D~~~~~~~~~~~--------------~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--- 332 (396)
T 3c0k_A 270 LSKAEFVRDDVFKLLRTYRDR--------------GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEG--- 332 (396)
T ss_dssp GGGEEEEESCHHHHHHHHHHT--------------TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEE---
T ss_pred ccceEEEECCHHHHHHHHHhc--------------CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC---
Confidence 657999999999987654321 245999999999843 234443433 6654
Q ss_pred CCCCCCEEEEEEcccCCC-hhHHhHhhh-c-CCCceEEEEeecccCCCCC
Q psy16898 278 KLSRPPVLYLYCFLPKMD-LETKKKIKS-Y-DPSYATLIRGIRRLSSDGP 324 (324)
Q Consensus 278 ~~~~~g~vh~y~f~~~~~-~~~~~~v~~-y-~~~~~~~i~~~~~~~~d~~ 324 (324)
|+++++|+..... +++.+.++. + ..+....+++...+++|||
T Consensus 333 -----G~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d~p 377 (396)
T 3c0k_A 333 -----GILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHP 377 (396)
T ss_dssp -----EEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEEECCTTSC
T ss_pred -----cEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEECCCCCCCC
Confidence 8999888877644 345555542 2 3556788889999999998
No 8
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.95 E-value=2.6e-26 Score=221.52 Aligned_cols=236 Identities=20% Similarity=0.207 Sum_probs=179.0
Q ss_pred eeEEECCEEEEEeCc-hhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcc--cccceeeEEccCCCeEEEEEeCCeEEEEe
Q psy16898 63 SFTSVGHIVHCNLRE-ELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNT--YRNFQMELLAGKDCMVTMHKENGCTFKMD 139 (324)
Q Consensus 63 ~~d~~G~i~vi~~~~-~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~--~~~~~~~~l~G~~~~~~~~~e~g~~f~id 139 (324)
.+|+||+++++++.. .+.+.++.|+++|.+.++++++|+.+.+...+. -.+...++++|+.+..+.+.|+|++|.++
T Consensus 113 ~vd~~g~~~v~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~e~g~~~~~~ 192 (396)
T 2as0_A 113 IVDRFNDIASLQISSAGMERFKLDVAEAIMEVEPGIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIQEGRAKFIVD 192 (396)
T ss_dssp EEEEETTEEEEEECCHHHHTTHHHHHHHHHHHCTTCCEEEEEECSHHHHHTTCCCEEEEEEESCCCEEEEEETTEEEEEE
T ss_pred EEEEECCEEEEEECcHHHHHHHHHHHHHHHHhCCCCCEEEEeCCcchHhhcCCCcccceecCCCCceEEEEeCCEEEEEe
Confidence 357899999999764 566788999999998867789999984322121 12336788999876667778999999999
Q ss_pred cc----ceeecCcChHHHHHHHhhcc-CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCC
Q psy16898 140 FS----KVYWNSRLSTEHERVTKEVR-EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKT 213 (324)
Q Consensus 140 ~~----~~f~~~r~~~e~~~~~~~~~-~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~ 213 (324)
+. .||++++ +.+.++..+. ++++|||+|||+|.+++.+|+.|+ +|+|+|+|+.+++.|++|++.|+ +.+
T Consensus 193 ~~~~~tg~f~~~~---~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~--~~~ 267 (396)
T 2as0_A 193 MRGQKTGFFLDQR---ENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNG--VED 267 (396)
T ss_dssp SSSSSSCCCSTTH---HHHHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CGG
T ss_pred ccccccCccCCHH---HHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC--CCc
Confidence 84 4888877 5555555555 889999999999999999999876 99999999999999999999999 866
Q ss_pred CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-------------HHHHHHHhccchhhcCCCC
Q psy16898 214 PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-------------VEYVRYLKVLTREEFGKLS 280 (324)
Q Consensus 214 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-------------~~~l~~~~~l~~~~~~~~~ 280 (324)
+++++++|+.+++...... ...||.|++|||+.+ ..++..+.. .++
T Consensus 268 ~v~~~~~d~~~~~~~~~~~--------------~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~-------~Lk 326 (396)
T 2as0_A 268 RMKFIVGSAFEEMEKLQKK--------------GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLN-------LVK 326 (396)
T ss_dssp GEEEEESCHHHHHHHHHHT--------------TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHT-------TEE
T ss_pred cceEEECCHHHHHHHHHhh--------------CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH-------hcC
Confidence 8999999999987654321 245999999999843 123333333 233
Q ss_pred CCCEEEEEEcccCCC-hhHHhHhhh--cCCCceEEEEe-ecccCCCCC
Q psy16898 281 RPPVLYLYCFLPKMD-LETKKKIKS--YDPSYATLIRG-IRRLSSDGP 324 (324)
Q Consensus 281 ~~g~vh~y~f~~~~~-~~~~~~v~~--y~~~~~~~i~~-~~~~~~d~~ 324 (324)
++|++.+.++..... ..+.+.+.. -..+...+++. ...+++|||
T Consensus 327 pgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~d~p 374 (396)
T 2as0_A 327 DGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLEPYRTQAPDHP 374 (396)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESSCBBCSCTTSC
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeccCCCCCCCC
Confidence 458888777776544 345555532 23566788888 889999998
No 9
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.95 E-value=5.2e-26 Score=218.54 Aligned_cols=229 Identities=18% Similarity=0.147 Sum_probs=176.6
Q ss_pred eEEECCEEEEEeCc-hhhhhHHHHHHHHHhhCCCceEEEEcCCCCCccc--ccceeeEEccCCCeEEEEEeCCeEEEEec
Q psy16898 64 FTSVGHIVHCNLRE-ELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTY--RNFQMELLAGKDCMVTMHKENGCTFKMDF 140 (324)
Q Consensus 64 ~d~~G~i~vi~~~~-~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~--~~~~~~~l~G~~~~~~~~~e~g~~f~id~ 140 (324)
+|+||+++++++.. .+.+.++.|+++|.+.+ ++|+.+.+...+.. .+...++++|+.+..+.+.|+|++|.+++
T Consensus 110 vd~~g~~~vv~~~~~~~~~~~~~i~~~l~~~~---~~i~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~e~g~~f~i~~ 186 (382)
T 1wxx_A 110 VDYYAGHAVVQATAHAWEGLLPQVAEALRPHV---QSVLAKNDARTRELEGLPLYVRPLLGEVPERVQVQEGRVRYLVDL 186 (382)
T ss_dssp EEEETTEEEEEECSHHHHTTHHHHHHHHGGGC---SEEEEEECCTHHHHTTCCCEEEEEESCCCSEEEEEETTEEEEEEC
T ss_pred EEEECCEEEEEECcHHHHHHHHHHHHHHHHHh---hEEEEcCCchhhhhcCCCcccceecCCCCceEEEEECCEEEEEEc
Confidence 56899999999754 56678888999998765 89998843322221 23466788998766677889999999999
Q ss_pred c-----ceeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCe
Q psy16898 141 S-----KVYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPI 215 (324)
Q Consensus 141 ~-----~~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v 215 (324)
. .+|++++ +.+.++..+ ++++|||+|||+|.+++.+|+.+.+|+|+|+|+.+++.|++|++.|+ +. ++
T Consensus 187 ~~~~~~g~f~~~~---~~~~~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~--~~-~~ 259 (382)
T 1wxx_A 187 RAGQKTGAYLDQR---ENRLYMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNG--LG-NV 259 (382)
T ss_dssp STTSCCCCCGGGH---HHHHHGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTT--CT-TE
T ss_pred hhcccCccccchH---HHHHHHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC--CC-Cc
Confidence 8 5888877 555666666 88999999999999999999986699999999999999999999999 87 59
Q ss_pred EEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-------------HHHHHHHhc-cchhhcCCCCC
Q psy16898 216 SATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-------------VEYVRYLKV-LTREEFGKLSR 281 (324)
Q Consensus 216 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-------------~~~l~~~~~-l~~~~~~~~~~ 281 (324)
+++++|+.+++...... ...||+|++|||+.+ ..++..+.. |++
T Consensus 260 ~~~~~d~~~~~~~~~~~--------------~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-------- 317 (382)
T 1wxx_A 260 RVLEANAFDLLRRLEKE--------------GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKE-------- 317 (382)
T ss_dssp EEEESCHHHHHHHHHHT--------------TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE--------
T ss_pred eEEECCHHHHHHHHHhc--------------CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC--------
Confidence 99999999987654321 245999999999843 123333333 454
Q ss_pred CCEEEEEEcccCCCh-hHHhHhhh--cCCCceEEEEeecccCCCCC
Q psy16898 282 PPVLYLYCFLPKMDL-ETKKKIKS--YDPSYATLIRGIRRLSSDGP 324 (324)
Q Consensus 282 ~g~vh~y~f~~~~~~-~~~~~v~~--y~~~~~~~i~~~~~~~~d~~ 324 (324)
+|++.+++++..... .+.+.++. -..+...++++.+.+++|||
T Consensus 318 gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d~p 363 (382)
T 1wxx_A 318 GGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHP 363 (382)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEECCCTTSC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEcCCCCCCCC
Confidence 589998888776443 45565542 24566788999999999998
No 10
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.91 E-value=3.8e-23 Score=212.59 Aligned_cols=228 Identities=14% Similarity=0.156 Sum_probs=161.0
Q ss_pred CceeEEECCEEEEEeCc--------hhhhhHHHHHHHHHhhCC-CceEEEEcCCCCCcccccceeeEEccCCCeEEEEEe
Q psy16898 61 MSSFTSVGHIVHCNLRE--------ELIEHKFIIGRVLLDKVP-SCETVVNKAHTIDNTYRNFQMELLAGKDCMVTMHKE 131 (324)
Q Consensus 61 ~~~~d~~G~i~vi~~~~--------~~~~~~~~I~~~l~~~~~-~i~~V~~k~~~~~~~~~~~~~~~l~G~~~~~~~~~e 131 (324)
.-.+|+||+++++|+.. .+...+..|.++|.+..+ .+++|+.|.+.. .++.......|+.+..+.+.|
T Consensus 430 gl~vD~y~d~lvvq~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~k~r~~---~~g~~~~~~~g~~~~~~~v~E 506 (703)
T 3v97_A 430 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRER---QKGKNQYQKLGEKGEFLEVTE 506 (703)
T ss_dssp CEEEEEETTEEEEEECC-------CHHHHHHHHHHHHHHHHHTCCGGGEEEECCC---------------CCSCCEEEEE
T ss_pred cEEEEEECCEEEEEeCCCccccchHHHHHHHHHHHHHHHHHhCCCcceeEEecccc---ccCcchhhccCCCCceEEEEE
Confidence 46789999999999743 244566778888877654 467888886532 111111112355555678899
Q ss_pred CCeEEEEeccc-----eeecCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHH
Q psy16898 132 NGCTFKMDFSK-----VYWNSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIR 205 (324)
Q Consensus 132 ~g~~f~id~~~-----~f~~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~ 205 (324)
+|++|.+|+.. +|++++ +.++++..+.+|++|||+|||+|.+++.+++.|+ +|+++|+|+.|++.|++|++
T Consensus 507 ~g~~~~v~~~~~~~tG~f~d~r---~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~ 583 (703)
T 3v97_A 507 YNAHLWVNLTDYLDTGLFLDHR---IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR 583 (703)
T ss_dssp TTEEEEECSSSSSSCSCCGGGH---HHHHHHHHHCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEeccccccCCCcccHH---HHHHHHHHhcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 99999999875 688887 6666666677899999999999999999999887 79999999999999999999
Q ss_pred HhCCCCC-CCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhH---------------HHHHHHh
Q psy16898 206 LNERQVK-TPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAV---------------EYVRYLK 269 (324)
Q Consensus 206 ~n~~~l~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~---------------~~l~~~~ 269 (324)
.|+ +. ++++++++|+.+++... ...||.|++|||.++. .++..+.
T Consensus 584 ~ng--l~~~~v~~i~~D~~~~l~~~-----------------~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~ 644 (703)
T 3v97_A 584 LNG--LTGRAHRLIQADCLAWLREA-----------------NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 644 (703)
T ss_dssp HTT--CCSTTEEEEESCHHHHHHHC-----------------CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHH
T ss_pred HcC--CCccceEEEecCHHHHHHhc-----------------CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHH
Confidence 999 87 58999999999987642 2459999999997531 1232222
Q ss_pred c-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhhcCCCceEEEEeecccCCCCC
Q psy16898 270 V-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKSYDPSYATLIRGIRRLSSDGP 324 (324)
Q Consensus 270 ~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~y~~~~~~~i~~~~~~~~d~~ 324 (324)
. |++ ||++.+.|........ .+.+..+ +.....+....+++|||
T Consensus 645 ~~Lkp--------gG~L~~s~~~~~~~~~-~~~l~~~--g~~~~~i~~~~lp~df~ 689 (703)
T 3v97_A 645 RLLRA--------GGTIMFSNNKRGFRMD-LDGLAKL--GLKAQEITQKTLSQDFA 689 (703)
T ss_dssp HHEEE--------EEEEEEEECCTTCCCC-HHHHHHT--TEEEEECTTTTCCGGGT
T ss_pred HhcCC--------CcEEEEEECCcccccC-HHHHHHc--CCceeeeeeccCCCCCC
Confidence 2 444 5888877666432222 2222222 34455666667777764
No 11
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.89 E-value=6.1e-22 Score=186.89 Aligned_cols=193 Identities=17% Similarity=0.157 Sum_probs=139.2
Q ss_pred EEEEeeccCCChHHHHHhccCCCCCCceeEEECCEEEEEeCc-hhhhhHHHHHHHHHhhCCCceEEEEcCCCCCcccccc
Q psy16898 36 AEVLLTYDNFSAEDILKAILPDNVAMSSFTSVGHIVHCNLRE-ELIEHKFIIGRVLLDKVPSCETVVNKAHTIDNTYRNF 114 (324)
Q Consensus 36 ~~~~~~y~~~~~~~~l~~~~p~~~~~~~~d~~G~i~vi~~~~-~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~~~~~~~~ 114 (324)
..+-|.-+.|+...++.. +..-.+|+||++++++..+ .++.++.. +.++ ..+++|+.|.+...+
T Consensus 33 ~~~~~~~~~~~~yrl~~~-----~pGl~~d~~g~~~vvq~~~~~~~~~~~~--~~~~---~~~~~i~~r~~~~eg----- 97 (332)
T 2igt_A 33 VPVILESSGAGDFHLIDS-----GNGLKLEQYGDYRVVRPEAQALWRPLVP--DRVW---QNADAIFTGDTDEDG----- 97 (332)
T ss_dssp EEEEEEECCCTTEEEEEE-----ETTEEEEEETTEEEEEECTTCCSCCCSC--HHHH---HTCSEEEEECC---C-----
T ss_pred CCeEEecCCCCeEEEEcC-----CCCEEEEEECCEEEEEECcHHHhhhhhh--hhhh---cCCcEEEEeCcccCC-----
Confidence 345667777776655543 2456789999999999865 34443311 2222 247899998643332
Q ss_pred eeeEEccC-CC-eEEEEEeCCeEEEEeccceee---cCcChHHHH-HHHhhc---cCCCEEEEEcCCCchhHHHHHhcCC
Q psy16898 115 QMELLAGK-DC-MVTMHKENGCTFKMDFSKVYW---NSRLSTEHE-RVTKEV---REGDLVLDVFAGVGPFSIPAARRGA 185 (324)
Q Consensus 115 ~~~~l~G~-~~-~~~~~~e~g~~f~id~~~~f~---~~r~~~e~~-~~~~~~---~~g~~VLDl~~G~G~~al~~a~~g~ 185 (324)
..++++|+ .+ ..+.+.|+|++|.+++..++. .+. +.+.+ .+.+.+ .++.+|||+|||+|.+++.+++.|+
T Consensus 98 ~~~~~~g~~~~~~~~~i~e~g~~f~v~~~~~~~tg~f~d-q~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga 176 (332)
T 2igt_A 98 MGRWRFPKEALGETWPLSLLGVEFLGRFTAFRHVGVFPE-QIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA 176 (332)
T ss_dssp CEEEECSSSCCCSEEEEEETTEEEEEECCSSSCCSCCGG-GHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC
T ss_pred CcceEecCCCCCCceEEEECCEEEEEecCccccceechH-HHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC
Confidence 23678884 33 567788999999999987543 222 22333 344444 4678999999999999999999989
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCC-CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 186 IVAANDLNPDSYAWLQASIRLNERQVKT-PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 186 ~V~avD~~~~a~~~a~~N~~~n~~~l~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+|+++|+|+.|++.|++|++.|+ +.+ +++++++|+.+++...... ...||.|++|||+.
T Consensus 177 ~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~--------------~~~fD~Ii~dPP~~ 236 (332)
T 2igt_A 177 EVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERR--------------GSTYDIILTDPPKF 236 (332)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHH--------------TCCBSEEEECCCSE
T ss_pred EEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhc--------------CCCceEEEECCccc
Confidence 99999999999999999999999 874 4999999999987653321 24599999999963
No 12
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.83 E-value=1.3e-20 Score=183.21 Aligned_cols=201 Identities=16% Similarity=0.238 Sum_probs=151.4
Q ss_pred eccCCChHHHHHhccCCCCCCceeEEECCEEEEEeC-chhhhhHHHHHHHHHhhCCCceEEEEcCCCC-CcccccceeeE
Q psy16898 41 TYDNFSAEDILKAILPDNVAMSSFTSVGHIVHCNLR-EELIEHKFIIGRVLLDKVPSCETVVNKAHTI-DNTYRNFQMEL 118 (324)
Q Consensus 41 ~y~~~~~~~~l~~~~p~~~~~~~~d~~G~i~vi~~~-~~~~~~~~~I~~~l~~~~~~i~~V~~k~~~~-~~~~~~~~~~~ 118 (324)
.|+..+..+.||+++ ++.+.. .|++++.... ... . +.| +.+|++++|+.+.+.. .+...+ ..++
T Consensus 182 ~y~~~~~~g~lr~~~----vr~~~~-~g~~~v~l~~~~~~---~----~~l-~~~~~~~~i~~~~~~~~~~~~~g-~~~~ 247 (425)
T 2jjq_A 182 VWNIKKDEGFLRYMV----LREGKF-TEEVMVNFVTKEGN---L----PDP-TNYFDFDSIYWSVNRSKSDVSYG-DIER 247 (425)
T ss_dssp BBBTTTTBCSEEEEE----EEECTT-TCCEEEEEEESSSC---C----CCC-TTTCCCSEEEEEECCSSSCCSCC-EEEE
T ss_pred ccccccCCCcceEEE----EEEccC-CCCEEEEEEeCchh---H----HHH-hhcCCeeEEEEEcCCCCCceecc-eEEE
Confidence 467788889999988 665542 4777765432 221 1 112 3578899999875543 344455 7788
Q ss_pred EccCCCeEEEEEeCCeEEEEeccceeecCcChHHHH--HHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHH
Q psy16898 119 LAGKDCMVTMHKENGCTFKMDFSKVYWNSRLSTEHE--RVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDS 196 (324)
Q Consensus 119 l~G~~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~--~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a 196 (324)
++|++ + +....+|++|.+++..||+.++.++++. .+++ +.++++|||+|||+|.+++.+|+.+.+|+|+|+|+.|
T Consensus 248 l~G~~-~-i~e~~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~a 324 (425)
T 2jjq_A 248 FWGKE-F-IRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFA 324 (425)
T ss_dssp EEECS-C-EEEEETTEEEEECTTSCCCSBHHHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHH
T ss_pred EECCC-e-EEEEECCEEEEEccccccccCHHHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHH
Confidence 99986 3 3334699999999999999887666654 2334 6788999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh--HHHHHHHhccchh
Q psy16898 197 YAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA--VEYVRYLKVLTRE 274 (324)
Q Consensus 197 ~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a--~~~l~~~~~l~~~ 274 (324)
++.|++|++.|+ +. ++++++|+.+++.. .||.|++|||+.. ..+++.++.++++
T Consensus 325 i~~A~~n~~~ng--l~--v~~~~~d~~~~~~~--------------------~fD~Vv~dPPr~g~~~~~~~~l~~l~p~ 380 (425)
T 2jjq_A 325 IEMARRNVEINN--VD--AEFEVASDREVSVK--------------------GFDTVIVDPPRAGLHPRLVKRLNREKPG 380 (425)
T ss_dssp HHHHHHHHHHHT--CC--EEEEECCTTTCCCT--------------------TCSEEEECCCTTCSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcC--Cc--EEEEECChHHcCcc--------------------CCCEEEEcCCccchHHHHHHHHHhcCCC
Confidence 999999999999 85 99999999875322 3999999999742 3477777666654
Q ss_pred hcCCCCCCCEEEEEEc
Q psy16898 275 EFGKLSRPPVLYLYCF 290 (324)
Q Consensus 275 ~~~~~~~~g~vh~y~f 290 (324)
+++.+.|.
T Consensus 381 --------givyvsc~ 388 (425)
T 2jjq_A 381 --------VIVYVSCN 388 (425)
T ss_dssp --------EEEEEESC
T ss_pred --------cEEEEECC
Confidence 77777764
No 13
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.77 E-value=7.1e-18 Score=161.10 Aligned_cols=179 Identities=16% Similarity=0.157 Sum_probs=119.3
Q ss_pred ECCEEEEEe-CchhhhhHHHHHHHHHhhCCC--c-eEEEEcCCCCCcccccceeeEEccCCCeEEEE-EeCC--eEEEEe
Q psy16898 67 VGHIVHCNL-REELIEHKFIIGRVLLDKVPS--C-ETVVNKAHTIDNTYRNFQMELLAGKDCMVTMH-KENG--CTFKMD 139 (324)
Q Consensus 67 ~G~i~vi~~-~~~~~~~~~~I~~~l~~~~~~--i-~~V~~k~~~~~~~~~~~~~~~l~G~~~~~~~~-~e~g--~~f~id 139 (324)
.|+++++.+ ...+....+.+++.+.+.++. + ..++.+. ...++++|++ +.... ..+| +.|.++
T Consensus 118 ~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~---------~~~~~~~G~~-~i~e~~~~~g~~~~~~~~ 187 (369)
T 3bt7_A 118 SNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRA---------TKTKIELDQD-YIDERLPVAGKEMIYRQV 187 (369)
T ss_dssp TCEEEEEEEESSCCCHHHHHHHHHHHHHHHTTTCEEEEEEEE---------TTEEEESSCS-EEEEECCBTTBCCEEEEE
T ss_pred CCcEEEEEEECCCCCHHHHHHHHHHHHhCcCCeeEEEEEeCC---------CceEEEcCCC-EEEEEeccCCceEEEEEC
Confidence 367777765 333334456667777665432 2 1223221 2346788875 32221 1278 788889
Q ss_pred ccceeecCcChHHHHH--HHhhcc-CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeE
Q psy16898 140 FSKVYWNSRLSTEHER--VTKEVR-EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPIS 216 (324)
Q Consensus 140 ~~~~f~~~r~~~e~~~--~~~~~~-~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~ 216 (324)
+..||+.+..+++... +++.+. .+++|||+|||+|.|++.+|+.+.+|+|+|+|+.|++.|++|++.|+ +. +++
T Consensus 188 ~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng--~~-~v~ 264 (369)
T 3bt7_A 188 ENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANH--ID-NVQ 264 (369)
T ss_dssp TTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTT--CC-SEE
T ss_pred CCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC--CC-ceE
Confidence 9999998886666542 344443 46799999999999999999977799999999999999999999999 86 899
Q ss_pred EEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 217 ATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 217 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
++++|+.+++.........+... +.......||.|++|||+.
T Consensus 265 ~~~~d~~~~~~~~~~~~~~~~l~--~~~~~~~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 265 IIRMAAEEFTQAMNGVREFNRLQ--GIDLKSYQCETIFVDPPRS 306 (369)
T ss_dssp EECCCSHHHHHHHSSCCCCTTGG--GSCGGGCCEEEEEECCCTT
T ss_pred EEECCHHHHHHHHhhcccccccc--ccccccCCCCEEEECcCcc
Confidence 99999998865431100000000 0000002599999999995
No 14
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.77 E-value=3.1e-18 Score=164.58 Aligned_cols=136 Identities=17% Similarity=0.204 Sum_probs=109.5
Q ss_pred EEEEeCCeEEEEec--------cceeecCcChHHHHHH---Hhhc----cCCCEEEEEcCCCchhHHHHHh--cCC-EEE
Q psy16898 127 TMHKENGCTFKMDF--------SKVYWNSRLSTEHERV---TKEV----REGDLVLDVFAGVGPFSIPAAR--RGA-IVA 188 (324)
Q Consensus 127 ~~~~e~g~~f~id~--------~~~f~~~r~~~e~~~~---~~~~----~~g~~VLDl~~G~G~~al~~a~--~g~-~V~ 188 (324)
+.++|+|++|.++. ..+||+++...+|..+ ++.+ .+|.+|||+|||+|.+|+.+|+ +|+ +|+
T Consensus 2 ~~i~E~g~~~~v~~~~~~~~~~~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~ 81 (392)
T 3axs_A 2 EIVQEGIAKIIVPEIPKTVSSDMPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAY 81 (392)
T ss_dssp EEEEETTEEEEECCCCSSCCTTCCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEE
T ss_pred eEEEECCEEEEEecccccccCCCCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEE
Confidence 35789999999965 3578877766555543 2322 3588999999999999999998 464 999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCCCC-eEEEeccHHHHHH-HHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHH
Q psy16898 189 ANDLNPDSYAWLQASIRLNERQVKTP-ISATQKDARDFLQ-TDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVR 266 (324)
Q Consensus 189 avD~~~~a~~~a~~N~~~n~~~l~~~-v~~~~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~ 266 (324)
++|+|+.+++.+++|++.|+ +.++ ++++++|+.+++. .. ...||+|++|||.....+++
T Consensus 82 avDi~~~av~~~~~N~~~Ng--l~~~~v~v~~~Da~~~l~~~~-----------------~~~fD~V~lDP~g~~~~~l~ 142 (392)
T 3axs_A 82 ANDISSKAIEIMKENFKLNN--IPEDRYEIHGMEANFFLRKEW-----------------GFGFDYVDLDPFGTPVPFIE 142 (392)
T ss_dssp EECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHHHSCC-----------------SSCEEEEEECCSSCCHHHHH
T ss_pred EEECCHHHHHHHHHHHHHhC--CCCceEEEEeCCHHHHHHHhh-----------------CCCCcEEEECCCcCHHHHHH
Confidence 99999999999999999999 9755 9999999999876 42 13599999999766667888
Q ss_pred HHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 267 YLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 267 ~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
.+.. ++++ |++++.|
T Consensus 143 ~a~~~Lk~g--------Gll~~t~ 158 (392)
T 3axs_A 143 SVALSMKRG--------GILSLTA 158 (392)
T ss_dssp HHHHHEEEE--------EEEEEEE
T ss_pred HHHHHhCCC--------CEEEEEe
Confidence 8776 7765 8888877
No 15
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.73 E-value=3.7e-17 Score=156.67 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=110.4
Q ss_pred EEEEeCCeEEEEec------cceeecCcChHHHHH---HHhhccCCCEEEEEcCCCchhHHHHHhc-C-CEEEEEeCCHH
Q psy16898 127 TMHKENGCTFKMDF------SKVYWNSRLSTEHER---VTKEVREGDLVLDVFAGVGPFSIPAARR-G-AIVAANDLNPD 195 (324)
Q Consensus 127 ~~~~e~g~~f~id~------~~~f~~~r~~~e~~~---~~~~~~~g~~VLDl~~G~G~~al~~a~~-g-~~V~avD~~~~ 195 (324)
+.++|++.+|.++. ..+|++++...+|.. +++.. ++.+|||+|||+|.+++.+|++ + .+|+++|+|+.
T Consensus 4 ~~~~Eg~~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~~-~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~ 82 (378)
T 2dul_A 4 IEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNIL-NPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 82 (378)
T ss_dssp EEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHH-CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred eEEEeCcEEEEecCccccCCCCceeCCchHHHHHHHHHHHHHc-CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHH
Confidence 45789999999976 268999988777765 33333 7889999999999999999986 4 49999999999
Q ss_pred HHHHHHHHHHHh---------------CCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 196 SYAWLQASIRLN---------------ERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 196 a~~~a~~N~~~n---------------~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+++.+++|++.| + +. +++++++|+.+++... ...||+|++|||..
T Consensus 83 av~~a~~N~~~n~~~~~~~~~~~~~~~g--l~-~i~v~~~Da~~~~~~~-----------------~~~fD~I~lDP~~~ 142 (378)
T 2dul_A 83 AYELMKRNVMLNFDGELRESKGRAILKG--EK-TIVINHDDANRLMAER-----------------HRYFHFIDLDPFGS 142 (378)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEES--SS-EEEEEESCHHHHHHHS-----------------TTCEEEEEECCSSC
T ss_pred HHHHHHHHHHHhcccccccccccccccC--CC-ceEEEcCcHHHHHHhc-----------------cCCCCEEEeCCCCC
Confidence 999999999999 8 76 4999999999887542 13499999999987
Q ss_pred hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 261 AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 261 a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
+..+++++.. ++++ |++++.|
T Consensus 143 ~~~~l~~a~~~lk~g--------G~l~vt~ 164 (378)
T 2dul_A 143 PMEFLDTALRSAKRR--------GILGVTA 164 (378)
T ss_dssp CHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred HHHHHHHHHHhcCCC--------CEEEEEe
Confidence 7889998866 7765 7887766
No 16
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.67 E-value=2.7e-16 Score=153.28 Aligned_cols=147 Identities=19% Similarity=0.273 Sum_probs=110.6
Q ss_pred eeEEccCCCeEEEEEeCCeEEEEeccceeecCcChHHHH--HHHhhc--cCCCEEEEEcCCCchhHHHHHhcCCEEEEEe
Q psy16898 116 MELLAGKDCMVTMHKENGCTFKMDFSKVYWNSRLSTEHE--RVTKEV--REGDLVLDVFAGVGPFSIPAARRGAIVAAND 191 (324)
Q Consensus 116 ~~~l~G~~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~--~~~~~~--~~g~~VLDl~~G~G~~al~~a~~g~~V~avD 191 (324)
...+.|.... +..+|++|.+++..||+.++..++.. .+++.+ .++.+|||+|||+|.+++.+|+.+++|+|+|
T Consensus 239 ~~~l~g~~~~---~~~~g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD 315 (433)
T 1uwv_A 239 LETVSGEMPW---YDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVE 315 (433)
T ss_dssp CEEEECCCCE---EEETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEE
T ss_pred EEEEeCCCcE---EEECCEEEEECcccccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEe
Confidence 3567787533 22789999999999998776555544 233433 4678999999999999999999988999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc
Q psy16898 192 LNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV 270 (324)
Q Consensus 192 ~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~ 270 (324)
+|+.|++.|++|++.|+ +. +++++++|+.+.+...... ...||.|++|||+. ..++++.+..
T Consensus 316 ~s~~al~~A~~n~~~~~--~~-~v~f~~~d~~~~l~~~~~~--------------~~~fD~Vv~dPPr~g~~~~~~~l~~ 378 (433)
T 1uwv_A 316 GVPALVEKGQQNARLNG--LQ-NVTFYHENLEEDVTKQPWA--------------KNGFDKVLLDPARAGAAGVMQQIIK 378 (433)
T ss_dssp SCHHHHHHHHHHHHHTT--CC-SEEEEECCTTSCCSSSGGG--------------TTCCSEEEECCCTTCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC--CC-ceEEEECCHHHHhhhhhhh--------------cCCCCEEEECCCCccHHHHHHHHHh
Confidence 99999999999999999 87 8999999998754321000 13599999999996 3345555554
Q ss_pred cchhhcCCCCCCCEEEEEEc
Q psy16898 271 LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 271 l~~~~~~~~~~~g~vh~y~f 290 (324)
+++ +.++++.|-
T Consensus 379 ~~p--------~~ivyvsc~ 390 (433)
T 1uwv_A 379 LEP--------IRIVYVSCN 390 (433)
T ss_dssp HCC--------SEEEEEESC
T ss_pred cCC--------CeEEEEECC
Confidence 444 356666553
No 17
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=1.7e-14 Score=124.01 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=85.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.+++.++++++ +|+|+|+|+.+++.|++|++.++ +. +++++++|+.+++....
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~~~--------- 110 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALG--LS-GATLRRGAVAAVVAAGT--------- 110 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHT--CS-CEEEEESCHHHHHHHCC---------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcC--CC-ceEEEEccHHHHHhhcc---------
Confidence 5788999999999999998888776 89999999999999999999999 84 89999999998765321
Q ss_pred cCCCCCCCCcccEEEECChhhh--HHHHHHHhccchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMNLPATA--VEYVRYLKVLTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a--~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|||... ....+.+..+... ..++++|++.+.+....
T Consensus 111 -------~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~--~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 111 -------TSPVDLVLADPPYNVDSADVDAILAALGTN--GWTREGTVAVVERATTC 157 (189)
T ss_dssp -------SSCCSEEEECCCTTSCHHHHHHHHHHHHHS--SSCCTTCEEEEEEETTS
T ss_pred -------CCCccEEEECCCCCcchhhHHHHHHHHHhc--CccCCCeEEEEEecCCC
Confidence 145999999999864 2222222222221 13556788877665544
No 18
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.58 E-value=3.8e-14 Score=121.08 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=82.5
Q ss_pred hhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 158 KEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 158 ~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+.+|.+|||+|||+|.+++.+++.+++|+|+|+|+.|++.|++|++.++ +. +++++++|+.++....
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~--~~-~v~~~~~~~~~l~~~~-------- 86 (185)
T 3mti_A 18 EVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLG--IE-NTELILDGHENLDHYV-------- 86 (185)
T ss_dssp TTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHT--CC-CEEEEESCGGGGGGTC--------
T ss_pred HhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC--CC-cEEEEeCcHHHHHhhc--------
Confidence 346789999999999999999999998899999999999999999999999 84 8999998876532211
Q ss_pred cccCCCCCCCCcccEEEECChh-------------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPA-------------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~-------------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|++. ....++..+.. |+++ |.+.+.+|...
T Consensus 87 ---------~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~~~~ 139 (185)
T 3mti_A 87 ---------REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG--------GRLAIMIYYGH 139 (185)
T ss_dssp ---------CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE--------EEEEEEEC---
T ss_pred ---------cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC--------cEEEEEEeCCC
Confidence 2359999999543 22344455544 6665 88888777654
No 19
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.56 E-value=1.3e-14 Score=128.37 Aligned_cols=93 Identities=11% Similarity=0.158 Sum_probs=73.5
Q ss_pred CcChHHHHHHHhhccCCCEEEEEcCC-CchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 147 SRLSTEHERVTKEVREGDLVLDVFAG-VGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 147 ~r~~~e~~~~~~~~~~g~~VLDl~~G-~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
++..++...+...+.++.+|||+||| +|.+++.+++. +++|+|+|+|+.+++.|++|+..++ + +++++++|+..
T Consensus 40 p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~--~v~~~~~d~~~ 115 (230)
T 3evz_A 40 TTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN--S--NVRLVKSNGGI 115 (230)
T ss_dssp CCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT--C--CCEEEECSSCS
T ss_pred CCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC--C--CcEEEeCCchh
Confidence 44333333233456789999999999 99999999998 7899999999999999999999999 7 69999999743
Q ss_pred HHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 225 FLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+..- ....||.|++|||+.
T Consensus 116 ~~~~-----------------~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 116 IKGV-----------------VEGTFDVIFSAPPYY 134 (230)
T ss_dssp STTT-----------------CCSCEEEEEECCCCC
T ss_pred hhhc-----------------ccCceeEEEECCCCc
Confidence 2110 014599999999974
No 20
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.55 E-value=3e-14 Score=131.25 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=85.8
Q ss_pred eCCeEEEEeccceeecCcChHHHH--HHHhhc--cCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHH
Q psy16898 131 ENGCTFKMDFSKVYWNSRLSTEHE--RVTKEV--REGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIR 205 (324)
Q Consensus 131 e~g~~f~id~~~~f~~~r~~~e~~--~~~~~~--~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~ 205 (324)
-.|..|.++...+. +|..+|.. .+++.+ .++.+|||+|||+|.+++.+++. +++|+|+|+|+.+++.|++|++
T Consensus 90 f~~~~~~v~~~~li--pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~ 167 (284)
T 1nv8_A 90 FMGLSFLVEEGVFV--PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAE 167 (284)
T ss_dssp ETTEEEECCTTSCC--CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHH
T ss_pred ECCeEEEeCCCcee--cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 36778888876543 55555554 234433 36789999999999999999987 7799999999999999999999
Q ss_pred HhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcc---cEEEECChhhh
Q psy16898 206 LNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAV---ARVIMNLPATA 261 (324)
Q Consensus 206 ~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---D~Vi~npP~~a 261 (324)
.++ +.++++++++|+.+.+.. .| |.|++|||+..
T Consensus 168 ~~~--l~~~v~~~~~D~~~~~~~--------------------~f~~~D~IvsnPPyi~ 204 (284)
T 1nv8_A 168 RHG--VSDRFFVRKGEFLEPFKE--------------------KFASIEMILSNPPYVK 204 (284)
T ss_dssp HTT--CTTSEEEEESSTTGGGGG--------------------GTTTCCEEEECCCCBC
T ss_pred HcC--CCCceEEEECcchhhccc--------------------ccCCCCEEEEcCCCCC
Confidence 999 876799999999874321 27 99999999853
No 21
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.55 E-value=2.7e-14 Score=129.28 Aligned_cols=84 Identities=14% Similarity=0.183 Sum_probs=71.9
Q ss_pred cc-CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VR-EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~-~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+. ++.+|||+|||+|.+++.+++++. +|+|+|+++.+++.|++|+..|+ +.++++++++|+.++.....
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~--~~~~v~~~~~D~~~~~~~~~------- 116 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQ--LEDQIEIIEYDLKKITDLIP------- 116 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTT--CTTTEEEECSCGGGGGGTSC-------
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCC--CcccEEEEECcHHHhhhhhc-------
Confidence 44 788999999999999999999866 99999999999999999999999 88789999999988653210
Q ss_pred cccCCCCCCCCcccEEEECChhhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
...||+|++|||+..
T Consensus 117 ---------~~~fD~Ii~npPy~~ 131 (259)
T 3lpm_A 117 ---------KERADIVTCNPPYFA 131 (259)
T ss_dssp ---------TTCEEEEEECCCC--
T ss_pred ---------cCCccEEEECCCCCC
Confidence 145999999999753
No 22
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=1.3e-13 Score=115.67 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=85.3
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
++.+|||+|||+|.+++.+++.+..|+|+|+|+.+++.|++|+..++ + +++++++|+.+++......
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~~~~~~--------- 107 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTG--L--GARVVALPVEVFLPEAKAQ--------- 107 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHT--C--CCEEECSCHHHHHHHHHHT---------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcC--C--ceEEEeccHHHHHHhhhcc---------
Confidence 78899999999999999999998899999999999999999999998 7 6999999999876543221
Q ss_pred CCCCCCCcccEEEECChhh--hHHHHHHHh--c-cchhhcCCCCCCCEEEEEEcccCCC
Q psy16898 242 GNSTGGTAVARVIMNLPAT--AVEYVRYLK--V-LTREEFGKLSRPPVLYLYCFLPKMD 295 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP~~--a~~~l~~~~--~-l~~~~~~~~~~~g~vh~y~f~~~~~ 295 (324)
...||.|++|||.. ..++++.+. . |++ +|.+.+.+......
T Consensus 108 -----~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~--------gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 108 -----GERFTVAFMAPPYAMDLAALFGELLASGLVEA--------GGLYVLQHPKDLYL 153 (171)
T ss_dssp -----TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEE--------EEEEEEEEETTSCC
T ss_pred -----CCceEEEEECCCCchhHHHHHHHHHhhcccCC--------CcEEEEEeCCccCC
Confidence 13599999999863 223444444 3 554 48887776665543
No 23
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=9.8e-14 Score=117.69 Aligned_cols=111 Identities=21% Similarity=0.229 Sum_probs=85.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|++|++.++ +.++++++++|+.+++...
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~--------- 97 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK--AENRFTLLKMEAERAIDCL--------- 97 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTT--CGGGEEEECSCHHHHHHHB---------
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcHHHhHHhh---------
Confidence 34788999999999999999999864 99999999999999999999998 8668999999999865431
Q ss_pred ccCCCCCCCCcccEEEECChhhh---HHHHHHHhccchhhcCCCCCCCEEEEEEcccCC
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA---VEYVRYLKVLTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a---~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
...||.|++|||... .+++..+.. ...++++|++.+.+.....
T Consensus 98 --------~~~fD~i~~~~~~~~~~~~~~~~~l~~-----~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 98 --------TGRFDLVFLDPPYAKETIVATIEALAA-----KNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp --------CSCEEEEEECCSSHHHHHHHHHHHHHH-----TTCEEEEEEEEEEEETTCC
T ss_pred --------cCCCCEEEECCCCCcchHHHHHHHHHh-----CCCcCCCcEEEEEECCccc
Confidence 134999999999632 233444430 1123345888877766553
No 24
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.53 E-value=9.6e-14 Score=118.23 Aligned_cols=109 Identities=18% Similarity=0.238 Sum_probs=84.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|++|+..++ +.++++++++|+.++.......
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~------- 113 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITK--EPEKFEVRKMDANRALEQFYEE------- 113 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHHHHHHHT-------
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhC--CCcceEEEECcHHHHHHHHHhc-------
Confidence 4788999999999999999988774 99999999999999999999998 8668999999999876543211
Q ss_pred cCCCCCCCCcccEEEECChhh---hHHHHHHH--hc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMNLPAT---AVEYVRYL--KV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~---a~~~l~~~--~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|||.. ....+..+ .. |++ +|++.+.+....
T Consensus 114 -------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~--------gG~l~~~~~~~~ 158 (187)
T 2fhp_A 114 -------KLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTN--------EAVIVCETDKTV 158 (187)
T ss_dssp -------TCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEE--------EEEEEEEEETTC
T ss_pred -------CCCCCEEEECCCCCchhHHHHHHHHHHhcccCC--------CCEEEEEeCCcc
Confidence 13599999999953 23344444 22 454 477776655544
No 25
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.52 E-value=9.1e-14 Score=121.30 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
++.+|||+|||+|.+++.++++++ +|+|+|+|+.+++.|++|++.++ +. +++++++|+.+++...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~--~~-~v~~~~~D~~~~~~~~----------- 119 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK--AG-NARVVNSNAMSFLAQK----------- 119 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT--CC-SEEEECSCHHHHHSSC-----------
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcC--CC-cEEEEECCHHHHHhhc-----------
Confidence 688999999999999999888776 99999999999999999999999 84 8999999998865421
Q ss_pred CCCCCCCCcccEEEECChhh---hHHHHHHHhc---cchhhcCCCCCCCEEEEEEcccC
Q psy16898 241 EGNSTGGTAVARVIMNLPAT---AVEYVRYLKV---LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~~---a~~~l~~~~~---l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|||.. ...++..+.. |++ +|++.+.+....
T Consensus 120 ------~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~p--------gG~l~i~~~~~~ 164 (202)
T 2fpo_A 120 ------GTPHNIVFVDPPFRRGLLEETINLLEDNGWLAD--------EALIYVESEVEN 164 (202)
T ss_dssp ------CCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEE--------EEEEEEEEEGGG
T ss_pred ------CCCCCEEEECCCCCCCcHHHHHHHHHhcCccCC--------CcEEEEEECCCc
Confidence 23599999999942 2234444432 444 488877666554
No 26
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=2.8e-13 Score=115.37 Aligned_cols=145 Identities=18% Similarity=0.230 Sum_probs=105.6
Q ss_pred eCCeEEEEeccc-eeecCcChHHHHHHHhhc--cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 131 ENGCTFKMDFSK-VYWNSRLSTEHERVTKEV--REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 131 e~g~~f~id~~~-~f~~~r~~~e~~~~~~~~--~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n 207 (324)
-.|..+.++... +|..+........+++.+ .++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.+++|+..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 97 (194)
T 1dus_A 18 LRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN 97 (194)
T ss_dssp ETTEEEEEEEETTSTTTTSCCHHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred cCCCceEEEeCCCcCCccccchHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc
Confidence 366677765443 454443333444555554 47889999999999999999999889999999999999999999998
Q ss_pred CCCCCC-CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-----HHHHHHHhc-cchhhcCCCC
Q psy16898 208 ERQVKT-PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-----VEYVRYLKV-LTREEFGKLS 280 (324)
Q Consensus 208 ~~~l~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-----~~~l~~~~~-l~~~~~~~~~ 280 (324)
+ +.+ +++++++|+.+... ...||.|++|+|... ..++..+.. ++++
T Consensus 98 ~--~~~~~~~~~~~d~~~~~~-------------------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g------ 150 (194)
T 1dus_A 98 N--LDNYDIRVVHSDLYENVK-------------------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN------ 150 (194)
T ss_dssp T--CTTSCEEEEECSTTTTCT-------------------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE------
T ss_pred C--CCccceEEEECchhcccc-------------------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCC------
Confidence 8 763 39999999876322 135999999998532 345555555 6664
Q ss_pred CCCEEEEEEcccCCChhHHhHhhh
Q psy16898 281 RPPVLYLYCFLPKMDLETKKKIKS 304 (324)
Q Consensus 281 ~~g~vh~y~f~~~~~~~~~~~v~~ 304 (324)
|.+.+.+..........+.++.
T Consensus 151 --G~l~~~~~~~~~~~~~~~~l~~ 172 (194)
T 1dus_A 151 --GEIWVVIQTKQGAKSLAKYMKD 172 (194)
T ss_dssp --EEEEEEEESTHHHHHHHHHHHH
T ss_pred --CEEEEEECCCCChHHHHHHHHH
Confidence 8888888776554445555443
No 27
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.51 E-value=2.3e-13 Score=123.17 Aligned_cols=142 Identities=17% Similarity=0.167 Sum_probs=103.3
Q ss_pred eCCeEEEEeccceeecCcChHHHHH--HH-hhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 131 ENGCTFKMDFSKVYWNSRLSTEHER--VT-KEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 131 e~g~~f~id~~~~f~~~r~~~e~~~--~~-~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n 207 (324)
.+++.+.+++..+|......+.+.. .+ ..+.++.+|||+|||+|.+++.+++.|++|+|+|+++.+++.+++|+..|
T Consensus 86 ~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~ 165 (254)
T 2nxc_A 86 GAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRN 165 (254)
T ss_dssp SSSEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT
T ss_pred CCceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHc
Confidence 3566778888887766555544432 22 23568899999999999999999998889999999999999999999999
Q ss_pred CCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh-HHHHHHHhc-cchhhcCCCCCCCEE
Q psy16898 208 ERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA-VEYVRYLKV-LTREEFGKLSRPPVL 285 (324)
Q Consensus 208 ~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a-~~~l~~~~~-l~~~~~~~~~~~g~v 285 (324)
+ +. ++++++|+.+.+.. ..||.|++|++... ..++..+.. ++++ |.+
T Consensus 166 ~--~~--v~~~~~d~~~~~~~-------------------~~fD~Vv~n~~~~~~~~~l~~~~~~Lkpg--------G~l 214 (254)
T 2nxc_A 166 G--VR--PRFLEGSLEAALPF-------------------GPFDLLVANLYAELHAALAPRYREALVPG--------GRA 214 (254)
T ss_dssp T--CC--CEEEESCHHHHGGG-------------------CCEEEEEEECCHHHHHHHHHHHHHHEEEE--------EEE
T ss_pred C--Cc--EEEEECChhhcCcC-------------------CCCCEEEECCcHHHHHHHHHHHHHHcCCC--------CEE
Confidence 9 75 89999998874211 34999999987643 346666655 6665 888
Q ss_pred EEEEcccCCChhHHhHhh
Q psy16898 286 YLYCFLPKMDLETKKKIK 303 (324)
Q Consensus 286 h~y~f~~~~~~~~~~~v~ 303 (324)
.+.++.........+.++
T Consensus 215 ils~~~~~~~~~v~~~l~ 232 (254)
T 2nxc_A 215 LLTGILKDRAPLVREAMA 232 (254)
T ss_dssp EEEEEEGGGHHHHHHHHH
T ss_pred EEEeeccCCHHHHHHHHH
Confidence 887777665554444443
No 28
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=5.4e-14 Score=122.64 Aligned_cols=106 Identities=21% Similarity=0.249 Sum_probs=82.4
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCC-CCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVK-TPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+|||+|.+++.++++++ +|+|+|+|+.+++.|++|++.++ +. ++++++++|+.+++...
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~---------- 120 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQP---------- 120 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSC----------
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhh----------
Confidence 688999999999999999888775 99999999999999999999999 83 48999999998764321
Q ss_pred cCCCCCCCCc-ccEEEECChhh---hHHHHHHHh--c-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTA-VARVIMNLPAT---AVEYVRYLK--V-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~-fD~Vi~npP~~---a~~~l~~~~--~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
.... ||.|++|||.. ...++..+. . |++ +|.+.+.+....
T Consensus 121 ------~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~Lkp--------gG~l~i~~~~~~ 167 (201)
T 2ift_A 121 ------QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKP--------NALIYVETEKDK 167 (201)
T ss_dssp ------CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEE--------EEEEEEEEESSS
T ss_pred ------ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCC--------CcEEEEEECCCC
Confidence 0246 99999999942 223454442 2 454 488777666554
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.51 E-value=2.1e-13 Score=117.60 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=87.5
Q ss_pred HhhccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
...+.++.+|||+|||+|.+++.+++. +++|+|+|+|+.+++.|++|++.++ +.++++++++|+.++....
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~---- 90 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYI---- 90 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTC----
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhc----
Confidence 345778999999999999999999985 2599999999999999999999998 8568999999987754211
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhh-------------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPAT-------------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~-------------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|+|.. ...++..+.. |+++ |++.+.++...
T Consensus 91 -------------~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g--------G~l~~~~~~~~ 143 (197)
T 3eey_A 91 -------------DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG--------GIITVVIYYGG 143 (197)
T ss_dssp -------------CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE--------EEEEEEECCBT
T ss_pred -------------cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC--------CEEEEEEccCC
Confidence 24599999999762 2456666665 7765 88887776653
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.51 E-value=1.1e-13 Score=121.20 Aligned_cols=118 Identities=15% Similarity=0.088 Sum_probs=94.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.+++.+|+.+++|+|+|+|+.+++.|++|++.++ ++++++++++|+.+.+..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~~----------- 119 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYG--LSPRMRAVQGTAPAALAD----------- 119 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCTTGGGTT-----------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC--CCCCEEEEeCchhhhccc-----------
Confidence 4678999999999999999999998899999999999999999999999 876899999999874332
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhhcC
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKSYD 306 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~y~ 306 (324)
...||.|+++...... +++.+.. |++ +|.+.+.++.........+.++.+.
T Consensus 120 -------~~~~D~v~~~~~~~~~-~l~~~~~~Lkp--------gG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 120 -------LPLPEAVFIGGGGSQA-LYDRLWEWLAP--------GTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp -------SCCCSEEEECSCCCHH-HHHHHHHHSCT--------TCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred -------CCCCCEEEECCcccHH-HHHHHHHhcCC--------CcEEEEEecCcccHHHHHHHHHhCC
Confidence 1249999999744333 6666655 665 4898888877665555566665544
No 31
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=4.6e-13 Score=113.14 Aligned_cols=116 Identities=15% Similarity=0.163 Sum_probs=89.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.+++|++.++ ++ +++++++|+.+.+..
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~-~~~~~~~d~~~~~~~----------- 98 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFN--IK-NCQIIKGRAEDVLDK----------- 98 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTT--CC-SEEEEESCHHHHGGG-----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcC--CC-cEEEEECCccccccC-----------
Confidence 4578899999999999999999977799999999999999999999998 85 799999999873221
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhccchhhcCCCCCCCEEEEEEcccCCChhHHhHhhhcC
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKVLTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKSYD 306 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~y~ 306 (324)
..||.|++++|.....++..+..+ + +|.+.+..+.........+.++.+.
T Consensus 99 --------~~~D~i~~~~~~~~~~~l~~~~~~-~--------gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 99 --------LEFNKAFIGGTKNIEKIIEILDKK-K--------INHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp --------CCCSEEEECSCSCHHHHHHHHHHT-T--------CCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred --------CCCcEEEECCcccHHHHHHHHhhC-C--------CCEEEEEecccccHHHHHHHHHHcC
Confidence 249999999984344566655544 3 5888877766554444555555443
No 32
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.48 E-value=4.1e-14 Score=128.68 Aligned_cols=85 Identities=18% Similarity=0.114 Sum_probs=72.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCH-------HHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNP-------DSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~-------~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
..++.+|||+|||+|.+++.+|+.|++|+|+|+|+ .+++.|++|++.|+ +.++++++++|+.+++......
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~--~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQD--TAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH--HHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhC--CccCeEEEECCHHHHHHhhhcc
Confidence 34678999999999999999999999999999999 99999999999998 8656999999999987643220
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+..||+|++|||..
T Consensus 159 --------------~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 159 --------------QGKPDIVYLDPMYP 172 (258)
T ss_dssp --------------HCCCSEEEECCCC-
T ss_pred --------------CCCccEEEECCCCC
Confidence 02499999999763
No 33
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.48 E-value=4.8e-13 Score=122.31 Aligned_cols=85 Identities=18% Similarity=0.268 Sum_probs=71.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh--cC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR--RG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~--~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|.+|||+|||+|.+++.+++ .+ .+|+|+|+++.+++.+++|++.++ +. +++++++|+.++.......
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g--~~-~v~~~~~D~~~~~~~~~~~---- 153 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG--VL-NTIIINADMRKYKDYLLKN---- 153 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEESCHHHHHHHHHHT----
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC--CC-cEEEEeCChHhcchhhhhc----
Confidence 56889999999999999999998 45 699999999999999999999999 87 8999999999875432110
Q ss_pred hcccCCCCCCCCcccEEEECChhhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
...||.|++|||.+.
T Consensus 154 ----------~~~fD~Vl~d~Pcs~ 168 (274)
T 3ajd_A 154 ----------EIFFDKILLDAPCSG 168 (274)
T ss_dssp ----------TCCEEEEEEEECCC-
T ss_pred ----------cccCCEEEEcCCCCC
Confidence 135999999999854
No 34
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=4.6e-14 Score=122.47 Aligned_cols=83 Identities=24% Similarity=0.276 Sum_probs=52.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.+++.+++. +++|+|+|+|+.+++.|++|+..++ + +++++++|+.+........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~~~~~~------ 98 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG--A--VVDWAAADGIEWLIERAER------ 98 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHHHHHHHHHT------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC--C--ceEEEEcchHhhhhhhhhc------
Confidence 67889999999999999999997 5599999999999999999999988 6 6899999998854432111
Q ss_pred ccCCCCCCCCcccEEEECChhhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
...||.|++|||+..
T Consensus 99 --------~~~fD~i~~npp~~~ 113 (215)
T 4dzr_A 99 --------GRPWHAIVSNPPYIP 113 (215)
T ss_dssp --------TCCBSEEEECCCCCC
T ss_pred --------cCcccEEEECCCCCC
Confidence 245999999999853
No 35
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.46 E-value=3.2e-13 Score=129.47 Aligned_cols=131 Identities=22% Similarity=0.212 Sum_probs=95.6
Q ss_pred CCeEEEEeccceeecCcChHHHHHHHh----hc----cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHH
Q psy16898 132 NGCTFKMDFSKVYWNSRLSTEHERVTK----EV----REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQAS 203 (324)
Q Consensus 132 ~g~~f~id~~~~f~~~r~~~e~~~~~~----~~----~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N 203 (324)
.++.|..++..|++... ......+++ .+ .++.+|||+|||+|.+++.+++.+++|+++|+|+.+++.|++|
T Consensus 196 ~~~~~~~~pgvFs~~~~-d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n 274 (381)
T 3dmg_A 196 AEYTFHHLPGVFSAGKV-DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKG 274 (381)
T ss_dssp EEEEEEECTTCTTTTSC-CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHH
T ss_pred ceEEEEeCCCceeCCCC-CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence 34566666665554322 212222222 22 2688999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh---------HHHHHHHhc-cch
Q psy16898 204 IRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA---------VEYVRYLKV-LTR 273 (324)
Q Consensus 204 ~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a---------~~~l~~~~~-l~~ 273 (324)
+..|+ +. ++++++|+.+.... ...||.|++|||... ..++..+.. |++
T Consensus 275 ~~~~~--~~--v~~~~~D~~~~~~~------------------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 275 LEANA--LK--AQALHSDVDEALTE------------------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRP 332 (381)
T ss_dssp HHHTT--CC--CEEEECSTTTTSCT------------------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEE
T ss_pred HHHcC--CC--eEEEEcchhhcccc------------------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCc
Confidence 99999 75 89999999875432 135999999998753 245665555 676
Q ss_pred hhcCCCCCCCEEEEEEcccC
Q psy16898 274 EEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 274 ~~~~~~~~~g~vh~y~f~~~ 293 (324)
+ |.+.+.+....
T Consensus 333 G--------G~l~iv~n~~l 344 (381)
T 3dmg_A 333 G--------GVFFLVSNPFL 344 (381)
T ss_dssp E--------EEEEEEECTTS
T ss_pred C--------cEEEEEEcCCC
Confidence 5 88877665544
No 36
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.44 E-value=6.1e-13 Score=121.43 Aligned_cols=105 Identities=21% Similarity=0.209 Sum_probs=82.0
Q ss_pred CCeEEEEeccceeecCcChHHHH--HHHhhc-cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH
Q psy16898 132 NGCTFKMDFSKVYWNSRLSTEHE--RVTKEV-REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL 206 (324)
Q Consensus 132 ~g~~f~id~~~~f~~~r~~~e~~--~~~~~~-~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~ 206 (324)
.|..|.++...+. ++..+|.. .+++.+ .++.+|||+|||+|.+++.+++. +++|+|+|+|+.+++.|++|++.
T Consensus 78 ~~~~~~~~~~~~i--pr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~ 155 (276)
T 2b3t_A 78 WSLPLFVSPATLI--PRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQH 155 (276)
T ss_dssp TTEEEECCTTSCC--CCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEeCCCCcc--cCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 5667777665443 44444443 244444 56789999999999999999974 66999999999999999999999
Q ss_pred hCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 207 NERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 207 n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
++ ++ +++++++|+.+... ...||.|++|||+.
T Consensus 156 ~~--~~-~v~~~~~d~~~~~~-------------------~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 156 LA--IK-NIHILQSDWFSALA-------------------GQQFAMIVSNPPYI 187 (276)
T ss_dssp HT--CC-SEEEECCSTTGGGT-------------------TCCEEEEEECCCCB
T ss_pred cC--CC-ceEEEEcchhhhcc-------------------cCCccEEEECCCCC
Confidence 99 87 79999999876421 13599999999984
No 37
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.43 E-value=1.1e-12 Score=124.08 Aligned_cols=80 Identities=28% Similarity=0.314 Sum_probs=70.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG---AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g---~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|++++.+|..+ .+|+|+|+|+.+++.|++|++.++ +. ++++.++|+.++...
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g--~~-~i~~~~~D~~~~~~~-------- 269 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG--LS-WIRFLRADARHLPRF-------- 269 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT--CT-TCEEEECCGGGGGGT--------
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC--CC-ceEEEeCChhhCccc--------
Confidence 4578899999999999999999964 799999999999999999999999 87 899999999886432
Q ss_pred hcccCCCCCCCCcccEEEECChhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+|++|||+.
T Consensus 270 ----------~~~~D~Ii~npPyg 283 (354)
T 3tma_A 270 ----------FPEVDRILANPPHG 283 (354)
T ss_dssp ----------CCCCSEEEECCCSC
T ss_pred ----------cCCCCEEEECCCCc
Confidence 12489999999984
No 38
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=6.4e-12 Score=110.72 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=91.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|.+++.+|+. +++|+++|+++.+++.|++|++.++ +.++++++++|+.+++......
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~l~~~~~~---- 129 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGASQDLIPQLKKK---- 129 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHGGGTTTT----
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCHHHHHHHHHHh----
Confidence 347889999999999999999983 6799999999999999999999999 8778999999998876543110
Q ss_pred hcccCCCCCCCCcccEEEECChhhhH-HHHHHHhccchhhcCCCCCCCEEEEEEcccCCChhHHhHhhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATAV-EYVRYLKVLTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKS 304 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a~-~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~ 304 (324)
.....||.|++|.+.... ..++.+..+ ..+++||++.+..+.......+.+.++.
T Consensus 130 --------~~~~~fD~V~~d~~~~~~~~~~~~~~~~-----~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 185 (221)
T 3u81_A 130 --------YDVDTLDMVFLDHWKDRYLPDTLLLEKC-----GLLRKGTVLLADNVIVPGTPDFLAYVRG 185 (221)
T ss_dssp --------SCCCCCSEEEECSCGGGHHHHHHHHHHT-----TCCCTTCEEEESCCCCCCCHHHHHHHHH
T ss_pred --------cCCCceEEEEEcCCcccchHHHHHHHhc-----cccCCCeEEEEeCCCCcchHHHHHHHhh
Confidence 001359999999865432 222222211 1344568888877666555666666644
No 39
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=1.6e-12 Score=112.91 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=91.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.+++.+++.+ ++|+|+|+|+.+++.|++|++.++ +. +++++++|+.+.+..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~--------- 105 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV--AR-NVTLVEAFAPEGLDD--------- 105 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT--CT-TEEEEECCTTTTCTT---------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC--CC-cEEEEeCChhhhhhc---------
Confidence 4578999999999999999999976 799999999999999999999999 84 899999998764332
Q ss_pred cccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhhc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKSY 305 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~y 305 (324)
...||.|+++.+.. ...+++.+.. |++ +|.+.+.++.........+.++..
T Consensus 106 ---------~~~~D~i~~~~~~~~~~~~l~~~~~~Lkp--------gG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 106 ---------LPDPDRVFIGGSGGMLEEIIDAVDRRLKS--------EGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp ---------SCCCSEEEESCCTTCHHHHHHHHHHHCCT--------TCEEEEEECBHHHHHHHHHHHHHT
T ss_pred ---------CCCCCEEEECCCCcCHHHHHHHHHHhcCC--------CeEEEEEecccccHHHHHHHHHHC
Confidence 13499999997643 3456666655 665 499998887765555555555443
No 40
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=3.2e-13 Score=122.56 Aligned_cols=89 Identities=21% Similarity=0.198 Sum_probs=71.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHH---hCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRL---NERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~---n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
..++.+|||+|||+|.+++.++++. .+|+|+|+++.+++.|++|+.. |+ +.++++++++|+.++........+
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCTTCCHHHHHHTTC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCHHHHhhhhhhhcc
Confidence 3467899999999999999999864 5999999999999999999998 88 877899999999887543211100
Q ss_pred hhhcccCCCCCCCCcccEEEECChhhh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
....||+|++|||+..
T Consensus 112 -----------~~~~fD~Vv~nPPy~~ 127 (260)
T 2ozv_A 112 -----------PDEHFHHVIMNPPYND 127 (260)
T ss_dssp -----------CTTCEEEEEECCCC--
T ss_pred -----------CCCCcCEEEECCCCcC
Confidence 0245999999999864
No 41
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.41 E-value=9.1e-13 Score=119.90 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=85.9
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc----CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR----GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~----g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.+++|.+|||+|||+|.+++.++++ |++|+|+|+|+.|++.|++++...+ ...+++++++|+.++..
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~~~D~~~~~~------- 137 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVIEGDIRDIAI------- 137 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCTTTCCC-------
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEeecccccccc-------
Confidence 3679999999999999999999974 6799999999999999999999877 66689999999876421
Q ss_pred hhhcccCCCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhH
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLET 298 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~ 298 (324)
..||.|+++ +|.....++..+.. |+++ |.+.+.......+...
T Consensus 138 -------------~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG--------G~lii~e~~~~~~~~~ 187 (261)
T 4gek_A 138 -------------ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG--------GALVLSEKFSFEDAKV 187 (261)
T ss_dssp -------------CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEEBCCSSHHH
T ss_pred -------------cccccceeeeeeeecCchhHhHHHHHHHHHcCCC--------cEEEEEeccCCCCHHH
Confidence 249999986 22223356666655 7776 8888776666555443
No 42
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.41 E-value=2.3e-12 Score=123.16 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=97.0
Q ss_pred eCCeEEEEeccceeecCcChHHHHHHHhhcc--CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH
Q psy16898 131 ENGCTFKMDFSKVYWNSRLSTEHERVTKEVR--EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL 206 (324)
Q Consensus 131 e~g~~f~id~~~~f~~~r~~~e~~~~~~~~~--~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~ 206 (324)
+.++++..++..|.+. .+....+.+++.+. ++.+|||+|||+|.+++.+++. +++|+|+|+|+.+++.+++|+..
T Consensus 190 ~~~~~~~~~pg~Fs~~-~~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ 268 (375)
T 4dcm_A 190 GTDWTIHNHANVFSRT-GLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 268 (375)
T ss_dssp TTTEEEEECTTCTTCS-SCCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCcccCC-cccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH
Confidence 4566666676655442 22333334555544 4589999999999999999997 57999999999999999999999
Q ss_pred hCCCCCC--CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh---------HHHHHHHhc-cchh
Q psy16898 207 NERQVKT--PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA---------VEYVRYLKV-LTRE 274 (324)
Q Consensus 207 n~~~l~~--~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a---------~~~l~~~~~-l~~~ 274 (324)
|+ +.+ +++++.+|+.+... ...||.|++|||... ..++..+.. |+++
T Consensus 269 ng--l~~~~~v~~~~~D~~~~~~-------------------~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 269 NM--PEALDRCEFMINNALSGVE-------------------PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp HC--GGGGGGEEEEECSTTTTCC-------------------TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred cC--CCcCceEEEEechhhccCC-------------------CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 98 763 58889999876321 235999999999632 245666655 7765
Q ss_pred hcCCCCCCCEEEEEEcccC
Q psy16898 275 EFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 275 ~~~~~~~~g~vh~y~f~~~ 293 (324)
|.+.+.+....
T Consensus 328 --------G~l~iv~n~~~ 338 (375)
T 4dcm_A 328 --------GELYIVANRHL 338 (375)
T ss_dssp --------EEEEEEEETTS
T ss_pred --------cEEEEEEECCc
Confidence 88887665544
No 43
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.40 E-value=1.5e-12 Score=113.04 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=87.6
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
.+.++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|++|+..++ +. +++++++|+.++.
T Consensus 57 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~----------- 122 (205)
T 3grz_A 57 AMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNG--IY-DIALQKTSLLADV----------- 122 (205)
T ss_dssp HCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CC-CCEEEESSTTTTC-----------
T ss_pred hccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CC-ceEEEeccccccC-----------
Confidence 356889999999999999999999876 99999999999999999999999 87 4999999987632
Q ss_pred cccCCCCCCCCcccEEEECChhhh-HHHHHHHhccchhhcCCCCCCCEEEEEEcccCCChhHHhHhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATA-VEYVRYLKVLTREEFGKLSRPPVLYLYCFLPKMDLETKKKIK 303 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a-~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~ 303 (324)
...||.|++++|... ..++..+.. .++++|.+.+.++.........+.++
T Consensus 123 ---------~~~fD~i~~~~~~~~~~~~l~~~~~-------~L~~gG~l~~~~~~~~~~~~~~~~~~ 173 (205)
T 3grz_A 123 ---------DGKFDLIVANILAEILLDLIPQLDS-------HLNEDGQVIFSGIDYLQLPKIEQALA 173 (205)
T ss_dssp ---------CSCEEEEEEESCHHHHHHHGGGSGG-------GEEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred ---------CCCceEEEECCcHHHHHHHHHHHHH-------hcCCCCEEEEEecCcccHHHHHHHHH
Confidence 135999999988742 123333333 22345888887777665555555543
No 44
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.39 E-value=3.4e-12 Score=112.28 Aligned_cols=110 Identities=14% Similarity=0.060 Sum_probs=87.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|.+++.+++. +++|+++|+++.+++.|++|++.++ +.++++++++|+.+.+.......
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~--- 136 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPAKDTLAELIHAG--- 136 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHTTT---
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCHHHHHHHhhhcc---
Confidence 457889999999999999999986 6799999999999999999999999 87679999999988766532100
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
....||.|++|++.. ...+++.+.. |+++ |++.++...
T Consensus 137 ---------~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg--------G~lv~~~~~ 176 (225)
T 3tr6_A 137 ---------QAWQYDLIYIDADKANTDLYYEESLKLLREG--------GLIAVDNVL 176 (225)
T ss_dssp ---------CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE--------EEEEEECSS
T ss_pred ---------CCCCccEEEECCCHHHHHHHHHHHHHhcCCC--------cEEEEeCCC
Confidence 013599999998864 3456776665 7775 787776443
No 45
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.39 E-value=1.6e-12 Score=112.96 Aligned_cols=75 Identities=28% Similarity=0.268 Sum_probs=66.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..++.+|||+|||+|.+++.+++.|. +|+|+|+|+.+++.+++|++.++ + +++++++|+.++.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~------------ 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK--G--KFKVFIGDVSEFN------------ 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT--T--SEEEEESCGGGCC------------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC--C--CEEEEECchHHcC------------
Confidence 34788999999999999999999876 89999999999999999999998 7 6999999998741
Q ss_pred ccCCCCCCCCcccEEEECChh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~ 259 (324)
..||.|++|||.
T Consensus 111 ---------~~~D~v~~~~p~ 122 (207)
T 1wy7_A 111 ---------SRVDIVIMNPPF 122 (207)
T ss_dssp ---------CCCSEEEECCCC
T ss_pred ---------CCCCEEEEcCCC
Confidence 139999999995
No 46
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.39 E-value=1.6e-12 Score=115.64 Aligned_cols=80 Identities=24% Similarity=0.237 Sum_probs=72.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.+++.+++.|.+|+|+|+|+.+++.|++|++.++ +.++++++++|+.++...
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~------------ 142 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLLLASF------------ 142 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHGGG------------
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHHhccc------------
Confidence 478999999999999999999999999999999999999999999999 855899999999986521
Q ss_pred CCCCCCCCcccEEEECChhhh
Q psy16898 241 EGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~~a 261 (324)
..||.|++|||...
T Consensus 143 -------~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 143 -------LKADVVFLSPPWGG 156 (241)
T ss_dssp -------CCCSEEEECCCCSS
T ss_pred -------CCCCEEEECCCcCC
Confidence 35999999999854
No 47
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.39 E-value=2.1e-12 Score=120.62 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=69.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.+++|++.++ +. +++++++|+.++...
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g--~~-~v~~~~~D~~~~~~~-------- 184 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG--VL-NVILFHSSSLHIGEL-------- 184 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT--CC-SEEEESSCGGGGGGG--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC--CC-eEEEEECChhhcccc--------
Confidence 568899999999999999999974 3699999999999999999999999 87 799999999875431
Q ss_pred hcccCCCCCCCCcccEEEECChhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||.|++|+|.+
T Consensus 185 ----------~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 185 ----------NVEFDKILLDAPCT 198 (315)
T ss_dssp ----------CCCEEEEEEECCTT
T ss_pred ----------cccCCEEEEeCCCC
Confidence 13599999999964
No 48
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.39 E-value=9.2e-12 Score=109.42 Aligned_cols=109 Identities=13% Similarity=0.060 Sum_probs=86.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|.+++.+|+. +++|+++|+++.+++.|++|+..++ +.++++++++|+.+.+......
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~---- 129 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLALDSLQQIENE---- 129 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHHT----
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhc----
Confidence 457889999999999999999996 7799999999999999999999999 8767999999999877654321
Q ss_pred hcccCCCCCCCCcccEEEECChhhh-HHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA-VEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a-~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
....||.|++|.+... ..+++.+.. |++ ||++.++...
T Consensus 130 ---------~~~~fD~v~~d~~~~~~~~~l~~~~~~L~p--------gG~lv~~~~~ 169 (223)
T 3duw_A 130 ---------KYEPFDFIFIDADKQNNPAYFEWALKLSRP--------GTVIIGDNVV 169 (223)
T ss_dssp ---------TCCCCSEEEECSCGGGHHHHHHHHHHTCCT--------TCEEEEESCS
T ss_pred ---------CCCCcCEEEEcCCcHHHHHHHHHHHHhcCC--------CcEEEEeCCC
Confidence 0134999999987543 356665554 555 4888776443
No 49
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.39 E-value=3.9e-12 Score=124.34 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=70.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--C-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--G-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|++|||+|||+|..++.+|+. + ..|+|+|+++.+++.+++|++.++ +. ++.++++|+.++....
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g--~~-nv~v~~~Da~~l~~~~------- 172 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG--VS-NAIVTNHAPAELVPHF------- 172 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT--CS-SEEEECCCHHHHHHHH-------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC--CC-ceEEEeCCHHHhhhhc-------
Confidence 568999999999999999999974 3 599999999999999999999999 87 7999999999875432
Q ss_pred hcccCCCCCCCCcccEEEECChh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~ 259 (324)
...||.|++|||.
T Consensus 173 ----------~~~FD~Il~DaPC 185 (456)
T 3m4x_A 173 ----------SGFFDRIVVDAPC 185 (456)
T ss_dssp ----------TTCEEEEEEECCC
T ss_pred ----------cccCCEEEECCCC
Confidence 1359999999995
No 50
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.39 E-value=3.8e-12 Score=124.68 Aligned_cols=80 Identities=25% Similarity=0.356 Sum_probs=69.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--C-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--G-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..+|++|||+|||+|..++.+|+. + ..|+|+|+|+.+++.+++|++.++ +. +.++++|+.++....
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G--~~--v~~~~~Da~~l~~~~------- 167 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG--AP--LAVTQAPPRALAEAF------- 167 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC--CC--CEEECSCHHHHHHHH-------
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--Ce--EEEEECCHHHhhhhc-------
Confidence 568999999999999999999974 3 599999999999999999999999 86 999999999875421
Q ss_pred hcccCCCCCCCCcccEEEECChhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||.|++|||.+
T Consensus 168 ----------~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 168 ----------GTYFHRVLLDAPCS 181 (464)
T ss_dssp ----------CSCEEEEEEECCCC
T ss_pred ----------cccCCEEEECCCcC
Confidence 13599999999974
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.38 E-value=6.6e-13 Score=119.19 Aligned_cols=113 Identities=17% Similarity=0.237 Sum_probs=89.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|++.++ +.++++++++|+.+...
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--------- 159 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKDIYEGIE--------- 159 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSCGGGCCC---------
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECchhhccC---------
Confidence 568899999999999999999987 6799999999999999999999999 87669999999985421
Q ss_pred hcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKI 302 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v 302 (324)
...||.|++|+|.. ..+++.+.. |+++ |.+.+++..........+.+
T Consensus 160 ----------~~~~D~v~~~~~~~-~~~l~~~~~~L~~g--------G~l~~~~~~~~~~~~~~~~l 207 (255)
T 3mb5_A 160 ----------EENVDHVILDLPQP-ERVVEHAAKALKPG--------GFFVAYTPCSNQVMRLHEKL 207 (255)
T ss_dssp ----------CCSEEEEEECSSCG-GGGHHHHHHHEEEE--------EEEEEEESSHHHHHHHHHHH
T ss_pred ----------CCCcCEEEECCCCH-HHHHHHHHHHcCCC--------CEEEEEECCHHHHHHHHHHH
Confidence 13599999999974 455666655 7775 88888876554333444444
No 52
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.38 E-value=3e-12 Score=108.03 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=91.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.+++.+++. +++|+++|+|+.+++.|++|+..++ +.+++ ++++|+.+.+...
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~-~~~~d~~~~~~~~-------- 91 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG--VSDRI-AVQQGAPRAFDDV-------- 91 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT--CTTSE-EEECCTTGGGGGC--------
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC--CCCCE-EEecchHhhhhcc--------
Confidence 457889999999999999999986 6699999999999999999999998 87678 8899986533221
Q ss_pred cccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhhcC
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKSYD 306 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~y~ 306 (324)
...||.|+++.+.....+++.+.. |++ +|.+.+.++.........+.++.+.
T Consensus 92 ---------~~~~D~i~~~~~~~~~~~l~~~~~~L~~--------gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 92 ---------PDNPDVIFIGGGLTAPGVFAAAWKRLPV--------GGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp ---------CSCCSEEEECC-TTCTTHHHHHHHTCCT--------TCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred ---------CCCCCEEEECCcccHHHHHHHHHHhcCC--------CCEEEEEeeccccHHHHHHHHHHcC
Confidence 135999999987654456666655 555 5898888877766666666666554
No 53
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.37 E-value=1.5e-12 Score=114.04 Aligned_cols=102 Identities=14% Similarity=0.162 Sum_probs=81.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.+++.+|+. +++|+|+|+|+.+++.|++|+..++ +. +++++++|+.++.... .
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~~-~------- 108 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG--VP-NIKLLWVDGSDLTDYF-E------- 108 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC--CS-SEEEEECCSSCGGGTS-C-------
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC--CC-CEEEEeCCHHHHHhhc-C-------
Confidence 35789999999999999999985 5699999999999999999999999 85 8999999998733111 0
Q ss_pred ccCCCCCCCCcccEEEECChhh------------hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT------------AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~------------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|++|+|.. ...++..+.. |++ +|.+++.+
T Consensus 109 --------~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp--------gG~l~~~~ 156 (214)
T 1yzh_A 109 --------DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPE--------NGEIHFKT 156 (214)
T ss_dssp --------TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCT--------TCEEEEEE
T ss_pred --------CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCC--------CcEEEEEe
Confidence 13599999998852 1357776665 665 48888765
No 54
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.37 E-value=1.3e-12 Score=125.78 Aligned_cols=84 Identities=18% Similarity=0.166 Sum_probs=72.7
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh--CCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN--ERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n--~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
.+.+|.+|||+|||+|.+++.+++.+++|+|+|+|+.+++.|++|++.+ + +. +++++++|+.+++.....
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~g--l~-~i~~i~~Da~~~L~~~~~----- 161 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNE--GK-DVNILTGDFKEYLPLIKT----- 161 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCT--TC-EEEEEESCGGGSHHHHHH-----
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccC--CC-cEEEEECcHHHhhhhccC-----
Confidence 3446899999999999999999999899999999999999999999998 8 74 899999999987654211
Q ss_pred hcccCCCCCCCCcccEEEECChhhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
..||.|++|||+..
T Consensus 162 -----------~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 162 -----------FHPDYIYVDPARRS 175 (410)
T ss_dssp -----------HCCSEEEECCEEC-
T ss_pred -----------CCceEEEECCCCcC
Confidence 23999999999964
No 55
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.36 E-value=6.2e-13 Score=119.50 Aligned_cols=85 Identities=11% Similarity=0.103 Sum_probs=68.3
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH-HHHHHHHhhhhhc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF-LQTDARAHLVRWS 238 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~-~~~~~~~~~~~~~ 238 (324)
++.+|||+|||+|.+++.++++ +++|+|+|+|+.|++.|++|++.++ +.++++++++|+.+. ......
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~------- 135 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN--LSDLIKVVKVPQKTLLMDALKE------- 135 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTCSSTTTSTT-------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC--CCccEEEEEcchhhhhhhhhhc-------
Confidence 5779999999999999999875 6799999999999999999999999 876799999998652 211100
Q ss_pred ccCCCCCCCCcccEEEECChhhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
.....||.|++|||+..
T Consensus 136 ------~~~~~fD~i~~npp~~~ 152 (254)
T 2h00_A 136 ------ESEIIYDFCMCNPPFFA 152 (254)
T ss_dssp ------CCSCCBSEEEECCCCC-
T ss_pred ------ccCCcccEEEECCCCcc
Confidence 00035999999999864
No 56
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.36 E-value=1e-12 Score=125.41 Aligned_cols=81 Identities=25% Similarity=0.174 Sum_probs=71.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA--IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~--~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..++.+|||+|||+|++++.+|..+. +|+|+|+|+.+++.|++|++.++ +.+++++.++|+.++...
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~~~~~--------- 283 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQLSQY--------- 283 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGGGGGT---------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhhCCcc---------
Confidence 56788999999999999999999876 99999999999999999999999 866899999999885432
Q ss_pred cccCCCCCCCCcccEEEECChhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||.|++|||+.
T Consensus 284 ---------~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 284 ---------VDSVDFAISNLPYG 297 (373)
T ss_dssp ---------CSCEEEEEEECCCC
T ss_pred ---------cCCcCEEEECCCCC
Confidence 13599999999964
No 57
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.35 E-value=4.2e-12 Score=112.36 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+|||+|.+++.+|+. ++.|+|+|+++.+++.|++|+..++ +. +++++++|+.+++.....
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~--l~-nv~~~~~Da~~~l~~~~~-------- 102 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG--LS-NLRVMCHDAVEVLHKMIP-------- 102 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT--CS-SEEEECSCHHHHHHHHSC--------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC--CC-cEEEEECCHHHHHHHHcC--------
Confidence 6789999999999999999985 4699999999999999999999998 87 799999999997654211
Q ss_pred cCCCCCCCCcccEEEEC--Chh--hh--------HHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 240 SEGNSTGGTAVARVIMN--LPA--TA--------VEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~n--pP~--~a--------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++ +|. .. ..++..+.. |+++ |.+++.+-
T Consensus 103 -------~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG--------G~l~i~td 151 (218)
T 3dxy_A 103 -------DNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG--------GVFHMATD 151 (218)
T ss_dssp -------TTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE--------EEEEEEES
T ss_pred -------CCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC--------cEEEEEeC
Confidence 2459999997 331 11 147777766 8876 88887663
No 58
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.35 E-value=1.7e-11 Score=103.99 Aligned_cols=117 Identities=18% Similarity=0.217 Sum_probs=91.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.+++.+++.+.+|+++|+|+.+++.+++|+..++ +.++++++++|+.+.+..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~----------- 97 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLMEGDAPEALCK----------- 97 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEESCHHHHHTT-----------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEecCHHHhccc-----------
Confidence 4578899999999999999999988999999999999999999999998 855899999999874332
Q ss_pred cCCCCCCCCcccEEEECChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhh
Q psy16898 240 SEGNSTGGTAVARVIMNLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKS 304 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~ 304 (324)
...||.|+++.+. ....++..+.. ++++ |.+.+..+.........+..+.
T Consensus 98 -------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g--------G~l~~~~~~~~~~~~~~~~l~~ 149 (192)
T 1l3i_A 98 -------IPDIDIAVVGGSGGELQEILRIIKDKLKPG--------GRIIVTAILLETKFEAMECLRD 149 (192)
T ss_dssp -------SCCEEEEEESCCTTCHHHHHHHHHHTEEEE--------EEEEEEECBHHHHHHHHHHHHH
T ss_pred -------CCCCCEEEECCchHHHHHHHHHHHHhcCCC--------cEEEEEecCcchHHHHHHHHHH
Confidence 1249999999873 34567777766 6665 8887777665444444444443
No 59
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.35 E-value=3.1e-12 Score=122.99 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=84.9
Q ss_pred EEEEeCCeEEEEeccce------e---ecCcChHHHHH--HHh--hccCCCEEEEEcCCCchhHHHHHhcCC--------
Q psy16898 127 TMHKENGCTFKMDFSKV------Y---WNSRLSTEHER--VTK--EVREGDLVLDVFAGVGPFSIPAARRGA-------- 185 (324)
Q Consensus 127 ~~~~e~g~~f~id~~~~------f---~~~r~~~e~~~--~~~--~~~~g~~VLDl~~G~G~~al~~a~~g~-------- 185 (324)
+.+.++++.+.+|.+.- | .......|... ++. ...++..|||+|||+|+|++.+|..++
T Consensus 153 v~l~~~~~~~~ld~sg~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R 232 (393)
T 3k0b_A 153 VSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNR 232 (393)
T ss_dssp EEEETTEEEEEEESSSSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTS
T ss_pred EEEECCEEEEEEecCCCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccc
Confidence 34456889999996541 1 11111223332 233 245788999999999999999997433
Q ss_pred --------------------------------EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 186 --------------------------------IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 186 --------------------------------~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
+|+|+|+|+.|++.|++|++.++ +.+++++.++|+.++..
T Consensus 233 ~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~------ 304 (393)
T 3k0b_A 233 EFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQT------ 304 (393)
T ss_dssp CCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCC------
T ss_pred cchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCC------
Confidence 49999999999999999999999 88779999999987532
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+||+|||+.
T Consensus 305 -------------~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 305 -------------EDEYGVVVANPPYG 318 (393)
T ss_dssp -------------CCCSCEEEECCCCC
T ss_pred -------------CCCCCEEEECCCCc
Confidence 13599999999974
No 60
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.34 E-value=4.1e-12 Score=110.83 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=71.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh------------CCCCCCCeEEEeccHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN------------ERQVKTPISATQKDARDFLQ 227 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n------------~~~l~~~v~~~~~D~~~~~~ 227 (324)
+.++.+|||+|||+|.++..+|++|++|+|+|+|+.|++.|+++...+ . . .+++++++|+.++..
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~--~-~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA--A-PGIEIWCGDFFALTA 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE--C-SSSEEEEECCSSSTH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCccccccccccccc--C-CccEEEECccccCCc
Confidence 357889999999999999999999999999999999999999876531 1 1 369999999987643
Q ss_pred HHHHHhhhhhcccCCCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchh
Q psy16898 228 TDARAHLVRWSQSEGNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~ 274 (324)
... ..||.|++. ++.....++..+.. |+++
T Consensus 97 ~~~-----------------~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 97 RDI-----------------GHCAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp HHH-----------------HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred ccC-----------------CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 311 139999863 22222345666655 6665
No 61
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=1.7e-11 Score=110.18 Aligned_cols=107 Identities=11% Similarity=0.102 Sum_probs=85.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+|+. +++|+++|+++.+++.|++|++.++ +.++++++.+|+.+++.....
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~l~~~~~----- 133 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPALQSLESLGE----- 133 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHTCCS-----
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHhcCC-----
Confidence 457899999999999999999986 6799999999999999999999999 877899999999987654210
Q ss_pred hcccCCCCCCCCcccEEEECChhhh-HHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA-VEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a-~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|++|.+... ..+++.+.. |++ ||++.+....
T Consensus 134 ----------~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp--------GG~lv~~~~~ 172 (248)
T 3tfw_A 134 ----------CPAFDLIFIDADKPNNPHYLRWALRYSRP--------GTLIIGDNVV 172 (248)
T ss_dssp ----------CCCCSEEEECSCGGGHHHHHHHHHHTCCT--------TCEEEEECCS
T ss_pred ----------CCCeEEEEECCchHHHHHHHHHHHHhcCC--------CeEEEEeCCC
Confidence 135999999987643 356666655 555 4888776443
No 62
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.34 E-value=5.4e-12 Score=110.95 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+|||+|.+++.+|+. ++.|+|+|+|+.+++.|++|+..++ +. +++++++|+.++.... .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~--~~-nv~~~~~d~~~l~~~~-~-------- 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE--AQ-NVKLLNIDADTLTDVF-E-------- 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC--CS-SEEEECCCGGGHHHHC-C--------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC--CC-CEEEEeCCHHHHHhhc-C--------
Confidence 5789999999999999999985 6799999999999999999999998 86 7999999998843211 0
Q ss_pred cCCCCCCCCcccEEEECChhh------------hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 240 SEGNSTGGTAVARVIMNLPAT------------AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~------------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|+++.|.. ...++..+.. |+++ |.+++.+
T Consensus 106 -------~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg--------G~l~~~t 153 (213)
T 2fca_A 106 -------PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG--------GSIHFKT 153 (213)
T ss_dssp -------TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS--------CEEEEEE
T ss_pred -------cCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCC--------CEEEEEe
Confidence 13499999875531 1456776665 6664 8888765
No 63
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.34 E-value=6.1e-13 Score=119.37 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=80.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHh--------CCCCCCCeEEEeccHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLN--------ERQVKTPISATQKDARDFLQTD 229 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n--------~~~l~~~v~~~~~D~~~~~~~~ 229 (324)
+.++.+|||+|||+|.+++.+|+.+ ..|+|+|+|+.+++.|++|++.+ + +. ++.++++|+.+++...
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~--~~-nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG--FQ-NINVLRGNAMKFLPNF 123 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST--TT-TEEEEECCTTSCGGGT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC--CC-cEEEEeccHHHHHHHh
Confidence 4578899999999999999999964 48999999999999999999987 7 75 8999999998754421
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEECChhhh------------HHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMNLPATA------------VEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a------------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
.. ...+|.|+++.|... ..++..+.. |+++ |.+.+.+
T Consensus 124 ~~---------------~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkpg--------G~l~~~t 173 (246)
T 2vdv_E 124 FE---------------KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEG--------GVVYTIT 173 (246)
T ss_dssp SC---------------TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred cc---------------ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCC--------CEEEEEe
Confidence 11 135888887755421 367777666 7765 7777743
No 64
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.34 E-value=1.5e-12 Score=124.91 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=85.4
Q ss_pred EEEEeCCeEEEEeccc--e----e---ecCcChHHHHH--HHhh--ccCCCEEEEEcCCCchhHHHHHhcC---------
Q psy16898 127 TMHKENGCTFKMDFSK--V----Y---WNSRLSTEHER--VTKE--VREGDLVLDVFAGVGPFSIPAARRG--------- 184 (324)
Q Consensus 127 ~~~~e~g~~f~id~~~--~----f---~~~r~~~e~~~--~~~~--~~~g~~VLDl~~G~G~~al~~a~~g--------- 184 (324)
+.+.++++.+.+|.+. + | .......|... ++.. ..++..|||+|||+|+|++.+|..+
T Consensus 147 ~~i~~~~~~~~lD~sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R 226 (385)
T 3ldu_A 147 VFIHKDKVTISIDTTGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNR 226 (385)
T ss_dssp EEEETTEEEEEEESCCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTS
T ss_pred EEEECCEEEEEEecCCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCccc
Confidence 4456788999999763 1 1 11111223332 2332 4578899999999999999998753
Q ss_pred -------------------------------CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 185 -------------------------------AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 185 -------------------------------~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
.+|+|+|+++.|++.|++|+..++ +.+++++.++|+.++..
T Consensus 227 ~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~g--l~~~i~~~~~D~~~l~~------ 298 (385)
T 3ldu_A 227 EFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAG--VDEYIEFNVGDATQFKS------ 298 (385)
T ss_dssp CCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCGGGCCC------
T ss_pred ccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhcCc------
Confidence 469999999999999999999999 87789999999987532
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+||+|||+.
T Consensus 299 -------------~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 299 -------------EDEFGFIITNPPYG 312 (385)
T ss_dssp -------------SCBSCEEEECCCCC
T ss_pred -------------CCCCcEEEECCCCc
Confidence 13599999999984
No 65
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.33 E-value=1.9e-12 Score=115.28 Aligned_cols=69 Identities=19% Similarity=0.240 Sum_probs=62.2
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHH
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFL 226 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~ 226 (324)
+.+.+.+|.+|||+|||+|.+++.+|+.+ .+|+|+|+|+.+++.|++|++.|+ +.+++++..+|+.+.+
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l 79 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAF 79 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGC
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhc
Confidence 44567889999999999999999999976 389999999999999999999999 9878999999987643
No 66
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.33 E-value=1.2e-11 Score=110.05 Aligned_cols=103 Identities=8% Similarity=0.138 Sum_probs=84.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHH-HHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQ-TDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~-~~~~~~~~~ 236 (324)
..++.+|||+|||+|.+++.+|+ .+++|+++|+++.+++.|++|++.++ +.++++++++|+.+.+. ..
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~------- 139 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGNALEQFENVN------- 139 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCHHHHT-------
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHhhc-------
Confidence 45788999999999999999999 56799999999999999999999999 87789999999988765 32
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|++|.+.. ...+++.+.. |+++ |++.+..
T Consensus 140 ----------~~~fD~V~~~~~~~~~~~~l~~~~~~Lkpg--------G~lv~d~ 176 (232)
T 3ntv_A 140 ----------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQ--------GLVITDN 176 (232)
T ss_dssp ----------TSCEEEEEEETTSSSHHHHHHHHGGGEEEE--------EEEEEEC
T ss_pred ----------cCCccEEEEcCcHHHHHHHHHHHHHhcCCC--------eEEEEee
Confidence 13599999998653 3457777766 7765 7877653
No 67
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.32 E-value=1.9e-12 Score=118.17 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=83.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLN-ERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+.++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|++.+ + .. +++++++|+.+...
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g--~~-~v~~~~~d~~~~~~-------- 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD--IG-NVRTSRSDIADFIS-------- 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC--CT-TEEEECSCTTTCCC--------
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC--CC-cEEEEECchhccCc--------
Confidence 457899999999999999999986 679999999999999999999988 7 65 79999999876211
Q ss_pred hhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++|+|.. ..+++.+.. |+++ |.+.+.+...
T Consensus 177 -----------~~~fD~Vi~~~~~~-~~~l~~~~~~Lkpg--------G~l~i~~~~~ 214 (275)
T 1yb2_A 177 -----------DQMYDAVIADIPDP-WNHVQKIASMMKPG--------SVATFYLPNF 214 (275)
T ss_dssp -----------SCCEEEEEECCSCG-GGSHHHHHHTEEEE--------EEEEEEESSH
T ss_pred -----------CCCccEEEEcCcCH-HHHHHHHHHHcCCC--------CEEEEEeCCH
Confidence 13599999999873 456666655 7765 8888777654
No 68
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.32 E-value=6.3e-12 Score=120.49 Aligned_cols=111 Identities=17% Similarity=0.151 Sum_probs=82.9
Q ss_pred EEeCCeEEEEeccce------e---ecCcChHHHHH--HHh--hccCCCEEEEEcCCCchhHHHHHhcCC----------
Q psy16898 129 HKENGCTFKMDFSKV------Y---WNSRLSTEHER--VTK--EVREGDLVLDVFAGVGPFSIPAARRGA---------- 185 (324)
Q Consensus 129 ~~e~g~~f~id~~~~------f---~~~r~~~e~~~--~~~--~~~~g~~VLDl~~G~G~~al~~a~~g~---------- 185 (324)
+.++.+.+.+|.+.- | .......|... ++. ...++..|+|+|||+|+|++.+|..++
T Consensus 148 ~~~~~~~~~ld~sg~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f 227 (384)
T 3ldg_A 148 LLKDQARVMIDTTGPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDF 227 (384)
T ss_dssp EETTEEEEEEESSSSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCC
T ss_pred EECCEEEEEEeccCCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccc
Confidence 346778888886651 1 11111223332 222 345788999999999999999997433
Q ss_pred ------------------------------EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 186 ------------------------------IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 186 ------------------------------~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+|+|+|+|+.|++.|++|++.++ +.+.+++.++|+.++...
T Consensus 228 ~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~~------- 298 (384)
T 3ldg_A 228 AFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKTN------- 298 (384)
T ss_dssp GGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCCC-------
T ss_pred hhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCcc-------
Confidence 49999999999999999999999 887899999999875321
Q ss_pred hhcccCCCCCCCCcccEEEECChhh
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
..||+||+|||+.
T Consensus 299 ------------~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 299 ------------KINGVLISNPPYG 311 (384)
T ss_dssp ------------CCSCEEEECCCCT
T ss_pred ------------CCcCEEEECCchh
Confidence 3599999999974
No 69
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.32 E-value=1.8e-12 Score=115.65 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=81.5
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcC-C-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRG-A-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g-~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
+.+.+.+|.+|+|+|||+|.+++.+++.| + +|+|+|+|+.+++.|++|++.|+ +.+++++.++|+.+.+...
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~~~---- 88 (230)
T 3lec_A 15 VANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFEEA---- 88 (230)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCGG----
T ss_pred HHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhccccc----
Confidence 45567889999999999999999999976 3 89999999999999999999999 9878999999998754321
Q ss_pred hhhhcccCCCCCCCCcccEEEE-CChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIM-NLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~-npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
..||.|++ +.=. .-.++++.... +++ ++.+.+...
T Consensus 89 --------------~~~D~IviaGmGg~lI~~IL~~~~~~l~~--------~~~lIlqp~ 126 (230)
T 3lec_A 89 --------------DNIDTITICGMGGRLIADILNNDIDKLQH--------VKTLVLQPN 126 (230)
T ss_dssp --------------GCCCEEEEEEECHHHHHHHHHHTGGGGTT--------CCEEEEEES
T ss_pred --------------cccCEEEEeCCchHHHHHHHHHHHHHhCc--------CCEEEEECC
Confidence 24998764 3322 12345555544 433 466666554
No 70
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.31 E-value=1.3e-11 Score=121.55 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+|++|||+|||+|..++.+|+. +..|+|+|+++.+++.+++|++.++ +. ++.++++|+.++....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g--~~-nv~~~~~D~~~~~~~~--------- 184 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG--IS-NVALTHFDGRVFGAAV--------- 184 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT--CC-SEEEECCCSTTHHHHS---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CC-cEEEEeCCHHHhhhhc---------
Confidence 8899999999999999999984 3599999999999999999999999 87 7999999998764321
Q ss_pred ccCCCCCCCCcccEEEECChhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||.|++|||.+
T Consensus 185 --------~~~fD~Il~D~PcS 198 (479)
T 2frx_A 185 --------PEMFDAILLDAPCS 198 (479)
T ss_dssp --------TTCEEEEEEECCCC
T ss_pred --------cccCCEEEECCCcC
Confidence 13599999999974
No 71
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=6.8e-12 Score=112.02 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=81.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.+++.+++ .+++|+|+|+|+.+++.|++|++.++ ++ +++++++|+.++......
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~~~~------- 138 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ--LE-NTTFCHDRAETFGQRKDV------- 138 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT--CS-SEEEEESCHHHHTTCTTT-------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--CC-CEEEEeccHHHhcccccc-------
Confidence 4788999999999999999995 56799999999999999999999999 87 699999999876421000
Q ss_pred ccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|+++.......+++.+.. |+++ |.+.++
T Consensus 139 --------~~~fD~V~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~ 173 (240)
T 1xdz_A 139 --------RESYDIVTARAVARLSVLSELCLPLVKKN--------GLFVAL 173 (240)
T ss_dssp --------TTCEEEEEEECCSCHHHHHHHHGGGEEEE--------EEEEEE
T ss_pred --------cCCccEEEEeccCCHHHHHHHHHHhcCCC--------CEEEEE
Confidence 135999998865444567777765 7765 777665
No 72
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.30 E-value=2.6e-11 Score=106.86 Aligned_cols=109 Identities=14% Similarity=0.066 Sum_probs=85.9
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
...++.+|||+|||+|.+++.+++. +++|+++|+++.+++.|++|++.++ +.++++++++|+.+.+.......
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~~~~~~~~~-- 141 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--AEHKIDLRLKPALETLDELLAAG-- 141 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHHTT--
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCCeEEEEEcCHHHHHHHHHhcC--
Confidence 3457889999999999999999984 5699999999999999999999998 86689999999998766543210
Q ss_pred hhcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
....||.|++|+|.. ...+++.+.. ++++ |++.+..
T Consensus 142 ----------~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg--------G~lv~~~ 179 (229)
T 2avd_A 142 ----------EAGTFDVAVVDADKENCSAYYERCLQLLRPG--------GILAVLR 179 (229)
T ss_dssp ----------CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE--------EEEEEEC
T ss_pred ----------CCCCccEEEECCCHHHHHHHHHHHHHHcCCC--------eEEEEEC
Confidence 003599999998753 2456666655 7765 7777654
No 73
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.30 E-value=5.1e-12 Score=113.67 Aligned_cols=70 Identities=11% Similarity=0.178 Sum_probs=63.2
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcC-C-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHH
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRG-A-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQ 227 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g-~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~ 227 (324)
+.+.+.+|.+|||+|||+|.+++.+++.+ + +|+|+|+|+.+++.|++|++.|+ +.+++++.++|+.+.+.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 15 VASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCC
T ss_pred HHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccC
Confidence 45568899999999999999999999976 3 89999999999999999999999 98789999999987543
No 74
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.29 E-value=2.8e-12 Score=118.76 Aligned_cols=109 Identities=15% Similarity=0.161 Sum_probs=74.1
Q ss_pred EEEEeCCeEEEEeccceeecCcChHHHHHHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Q psy16898 127 TMHKENGCTFKMDFSKVYWNSRLSTEHERVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASI 204 (324)
Q Consensus 127 ~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~ 204 (324)
+...++|++.+-.+++-|+......+ ++++. +.++++|||+|||+|.++..+++++++|+|+|+++.+++.+++++
T Consensus 15 ~~~~~~~~~~~k~~GQnfL~d~~i~~--~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~ 92 (295)
T 3gru_A 15 VPRGSHMFKPKKKLGQCFLIDKNFVN--KAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLK 92 (295)
T ss_dssp ---------------CCEECCHHHHH--HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHH
T ss_pred chhHhcCCCCccccCccccCCHHHHH--HHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHh
Confidence 45667888888888886654442222 34443 557899999999999999999999889999999999999999998
Q ss_pred HHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 205 RLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 205 ~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
.. .. +++++++|+.++.... ..||.|++|+|+.
T Consensus 93 ~~----~~-~v~vi~gD~l~~~~~~------------------~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 93 EL----YN-NIEIIWGDALKVDLNK------------------LDFNKVVANLPYQ 125 (295)
T ss_dssp HH----CS-SEEEEESCTTTSCGGG------------------SCCSEEEEECCGG
T ss_pred cc----CC-CeEEEECchhhCCccc------------------CCccEEEEeCccc
Confidence 73 33 7999999998752211 2399999999984
No 75
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.29 E-value=3.7e-12 Score=116.12 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=84.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|++.++ +.++++++++|+.+.+.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--------- 178 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDISEGFD--------- 178 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGGGCCS---------
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHccc---------
Confidence 457889999999999999999986 4699999999999999999999988 85589999999986521
Q ss_pred hcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++|+|.. ..+++.+.. |+++ |.+.+++...
T Consensus 179 ----------~~~~D~V~~~~~~~-~~~l~~~~~~L~pg--------G~l~~~~~~~ 216 (277)
T 1o54_A 179 ----------EKDVDALFLDVPDP-WNYIDKCWEALKGG--------GRFATVCPTT 216 (277)
T ss_dssp ----------CCSEEEEEECCSCG-GGTHHHHHHHEEEE--------EEEEEEESSH
T ss_pred ----------CCccCEEEECCcCH-HHHHHHHHHHcCCC--------CEEEEEeCCH
Confidence 13499999999973 456666655 7765 8888877644
No 76
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.29 E-value=1.2e-11 Score=109.57 Aligned_cols=100 Identities=12% Similarity=0.043 Sum_probs=81.3
Q ss_pred CCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 163 GDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVK-TPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~-~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.+|||+|||+|..++.+|+. +++|+++|+|+.+++.|++|++.++ +. ++++++++|+.+++....
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~-------- 126 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLA-------- 126 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSC--------
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhc--------
Confidence 349999999999999999983 6799999999999999999999999 87 789999999998765421
Q ss_pred ccCCCCCCCCcccEEEECChhhh-HHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA-VEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a-~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|++|.+... ..+++.+.. |+++ |++.+.
T Consensus 127 --------~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG--------G~lv~d 162 (221)
T 3dr5_A 127 --------NDSYQLVFGQVSPMDLKALVDAAWPLLRRG--------GALVLA 162 (221)
T ss_dssp --------TTCEEEEEECCCTTTHHHHHHHHHHHEEEE--------EEEEET
T ss_pred --------CCCcCeEEEcCcHHHHHHHHHHHHHHcCCC--------cEEEEe
Confidence 135999999986543 346766655 7775 776664
No 77
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=7.1e-13 Score=119.07 Aligned_cols=46 Identities=17% Similarity=0.115 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCchhHHHHHhc----CCEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR----GAIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~----g~~V~avD~~~~a~~~a~~N~~~n 207 (324)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 5679999999999999999986 569999999999999999999876
No 78
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.29 E-value=2.2e-11 Score=112.14 Aligned_cols=105 Identities=14% Similarity=0.082 Sum_probs=84.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++. |++|+|+|+|+.+++.|++++..++ +.++++++++|+.++ .
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~--~---------- 135 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF--D---------- 135 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC--C----------
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc--C----------
Confidence 468889999999999999999997 8999999999999999999999998 887899999999875 1
Q ss_pred ccCCCCCCCCcccEEEECChh-------------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCC
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA-------------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMD 295 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~-------------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~ 295 (324)
..||+|+++..- .-..++..+.. |++ ||.+.+.++.....
T Consensus 136 ---------~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp--------gG~l~i~~~~~~~~ 189 (302)
T 3hem_A 136 ---------EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD--------DGRMLLHTITIPDK 189 (302)
T ss_dssp ---------CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT--------TCEEEEEEEECCCH
T ss_pred ---------CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC--------CcEEEEEEEeccCc
Confidence 349999996321 11345655554 555 58888887776543
No 79
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=1.6e-11 Score=104.07 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=77.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.+++.+++++ +|+|+|+|+.|++. .. +++++++|+.+....
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-------~~-----~~~~~~~d~~~~~~~------------ 76 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-------HR-----GGNLVRADLLCSINQ------------ 76 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-------CS-----SSCEEECSTTTTBCG------------
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-------cc-----CCeEEECChhhhccc------------
Confidence 467899999999999999999999 99999999999987 22 478999998763221
Q ss_pred CCCCCCCCcccEEEECChhh-------------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHhhh
Q psy16898 241 EGNSTGGTAVARVIMNLPAT-------------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKIKS 304 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~~-------------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v~~ 304 (324)
..||.|++|||.. ...++..+.. + ++|.+.+.+.......+..+.++.
T Consensus 77 -------~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------pgG~l~~~~~~~~~~~~l~~~l~~ 138 (170)
T 3q87_B 77 -------ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV---------TVGMLYLLVIEANRPKEVLARLEE 138 (170)
T ss_dssp -------GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC---------CSSEEEEEEEGGGCHHHHHHHHHH
T ss_pred -------CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC---------CCCEEEEEEecCCCHHHHHHHHHH
Confidence 3499999999985 2344544443 4 358888877666655555555543
No 80
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=1.8e-11 Score=110.49 Aligned_cols=103 Identities=17% Similarity=0.070 Sum_probs=80.2
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.+++.+|.. +++|+++|+|+.+++.|++|++.++ +. +++++++|+.++.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--l~-~v~~~~~d~~~~~~~~~-------- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG--LK-GARALWGRAEVLAREAG-------- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT--CS-SEEEEECCHHHHTTSTT--------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC--CC-ceEEEECcHHHhhcccc--------
Confidence 46889999999999999999984 5699999999999999999999999 87 69999999988653200
Q ss_pred ccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
....||.|+++--..-..+++.+.. |+++ |.+.++.
T Consensus 148 -------~~~~fD~I~s~a~~~~~~ll~~~~~~Lkpg--------G~l~~~~ 184 (249)
T 3g89_A 148 -------HREAYARAVARAVAPLCVLSELLLPFLEVG--------GAAVAMK 184 (249)
T ss_dssp -------TTTCEEEEEEESSCCHHHHHHHHGGGEEEE--------EEEEEEE
T ss_pred -------cCCCceEEEECCcCCHHHHHHHHHHHcCCC--------eEEEEEe
Confidence 0135999999643323456666655 6665 7776654
No 81
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=3.4e-12 Score=118.36 Aligned_cols=104 Identities=12% Similarity=0.129 Sum_probs=71.0
Q ss_pred CCeEEEEeccceeecCcChHHHHHHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCC
Q psy16898 132 NGCTFKMDFSKVYWNSRLSTEHERVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNER 209 (324)
Q Consensus 132 ~g~~f~id~~~~f~~~r~~~e~~~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~ 209 (324)
++-.++-.+++.|+.+....+ ++++. +.++.+|||+|||+|.++..+++++++|+|+|+++.+++.|++|+..++
T Consensus 12 ~~~~~~k~~Gq~fl~~~~i~~--~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~- 88 (299)
T 2h1r_A 12 SGRENLYFQGQHLLKNPGILD--KIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEG- 88 (299)
T ss_dssp -----------CEECCHHHHH--HHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTT-
T ss_pred ccccchhccccceecCHHHHH--HHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC-
Confidence 344455555565654432222 34433 4578899999999999999999998899999999999999999999888
Q ss_pred CCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 210 QVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 210 ~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
++ +++++++|+.++.. ..||.|++|||+.
T Consensus 89 -~~-~v~~~~~D~~~~~~--------------------~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 89 -YN-NLEVYEGDAIKTVF--------------------PKFDVCTANIPYK 117 (299)
T ss_dssp -CC-CEEC----CCSSCC--------------------CCCSEEEEECCGG
T ss_pred -CC-ceEEEECchhhCCc--------------------ccCCEEEEcCCcc
Confidence 75 89999999876421 2499999999985
No 82
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.27 E-value=3.4e-11 Score=109.88 Aligned_cols=98 Identities=17% Similarity=0.094 Sum_probs=79.8
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
++.+|||+|||+|.+++.+++.|++|+|+|+|+.+++.|++++..++ + +++++++|+.+...
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~-------------- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKEN--L--NISTALYDINAANI-------------- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CEEEEECCGGGCCC--------------
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcC--C--ceEEEEeccccccc--------------
Confidence 78899999999999999999999999999999999999999999998 7 69999999886432
Q ss_pred CCCCCCCcccEEEECCh------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 242 GNSTGGTAVARVIMNLP------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++.+ .....++..+.. |+++ |.+.+.++
T Consensus 182 -----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~ 224 (286)
T 3m70_A 182 -----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVG--------GYNLIVAA 224 (286)
T ss_dssp -----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEE--------EEEEEEEE
T ss_pred -----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCC--------cEEEEEEe
Confidence 145999999753 223467777766 7765 77555444
No 83
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.26 E-value=1e-11 Score=111.50 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=86.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+|+. +++|+++|+++.+++.|++|++.++ +.++++++.+|+.+.+.....+.
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~~~~~~--- 132 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALDTLHSLLNEG--- 132 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHHHHHHHHHHH---
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHhhcc---
Confidence 457789999999999999999983 6799999999999999999999999 87789999999998876543210
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
....||.|++|.+.. ...+++.+.. |+++ |++.+...
T Consensus 133 ---------~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG--------G~lv~d~~ 171 (242)
T 3r3h_A 133 ---------GEHQFDFIFIDADKTNYLNYYELALKLVTPK--------GLIAIDNI 171 (242)
T ss_dssp ---------CSSCEEEEEEESCGGGHHHHHHHHHHHEEEE--------EEEEEECS
T ss_pred ---------CCCCEeEEEEcCChHHhHHHHHHHHHhcCCC--------eEEEEECC
Confidence 013599999998754 3456666655 7765 78777543
No 84
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.26 E-value=8.3e-11 Score=105.15 Aligned_cols=134 Identities=19% Similarity=0.171 Sum_probs=91.9
Q ss_pred EEccCCCeEEEEEeCCeEEEEeccceeecCcChHHHHHHHhh-----ccCCCEEEEEcCCCchhHHHHHhc---CCEEEE
Q psy16898 118 LLAGKDCMVTMHKENGCTFKMDFSKVYWNSRLSTEHERVTKE-----VREGDLVLDVFAGVGPFSIPAARR---GAIVAA 189 (324)
Q Consensus 118 ~l~G~~~~~~~~~e~g~~f~id~~~~f~~~r~~~e~~~~~~~-----~~~g~~VLDl~~G~G~~al~~a~~---g~~V~a 189 (324)
-++|+. ..+..|..|+. ||+.-+.--..++.. +++|++|||+|||+|.++..+|+. ..+|+|
T Consensus 38 ~vyge~----~~~~~~~e~r~------w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~a 107 (233)
T 4df3_A 38 RVYGER----IFRYNGEEYRE------WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYG 107 (233)
T ss_dssp CSSSCC----EEEETTEEEEE------CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEE
T ss_pred cccCce----EEEcCCceeee------ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEE
Confidence 346664 23445655554 777654322223321 579999999999999999999984 359999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh--hHHHHHH
Q psy16898 190 NDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT--AVEYVRY 267 (324)
Q Consensus 190 vD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~--a~~~l~~ 267 (324)
+|+++.|++.++++++..+ |+..+.+|+.+...... ....+|.|++|++.. +..++..
T Consensus 108 vD~s~~~~~~l~~~a~~~~-----ni~~V~~d~~~p~~~~~---------------~~~~vDvVf~d~~~~~~~~~~l~~ 167 (233)
T 4df3_A 108 VEFAPRVMRDLLTVVRDRR-----NIFPILGDARFPEKYRH---------------LVEGVDGLYADVAQPEQAAIVVRN 167 (233)
T ss_dssp EECCHHHHHHHHHHSTTCT-----TEEEEESCTTCGGGGTT---------------TCCCEEEEEECCCCTTHHHHHHHH
T ss_pred EeCCHHHHHHHHHhhHhhc-----CeeEEEEeccCcccccc---------------ccceEEEEEEeccCChhHHHHHHH
Confidence 9999999999998876433 79999999875322110 024599999987653 3456666
Q ss_pred Hhc-cchhhcCCCCCCCEEEEEE
Q psy16898 268 LKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 268 ~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
+.. ||++ |.+.+..
T Consensus 168 ~~r~LKpG--------G~lvI~i 182 (233)
T 4df3_A 168 ARFFLRDG--------GYMLMAI 182 (233)
T ss_dssp HHHHEEEE--------EEEEEEE
T ss_pred HHHhccCC--------CEEEEEE
Confidence 655 8876 7766543
No 85
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=4.1e-11 Score=114.26 Aligned_cols=104 Identities=16% Similarity=0.078 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+| |+|.+++.+++.+ .+|+++|+++.+++.|++|++.++ +. +++++++|+.+.+....
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g--~~-~v~~~~~D~~~~l~~~~--------- 238 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG--YE-DIEIFTFDLRKPLPDYA--------- 238 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT--CC-CEEEECCCTTSCCCTTT---------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CC-CEEEEEChhhhhchhhc---------
Confidence 688999999 9999999999875 499999999999999999999999 87 89999999987322100
Q ss_pred cCCCCCCCCcccEEEECChhhhH---HHHHHHhccchhhcCCCCCCCEEEEEEccc
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAV---EYVRYLKVLTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~---~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++|||.... .++..+.. .+++||.+.++++..
T Consensus 239 -------~~~fD~Vi~~~p~~~~~~~~~l~~~~~-------~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 239 -------LHKFDTFITDPPETLEAIRAFVGRGIA-------TLKGPRCAGYFGITR 280 (373)
T ss_dssp -------SSCBSEEEECCCSSHHHHHHHHHHHHH-------TBCSTTCEEEEEECT
T ss_pred -------cCCccEEEECCCCchHHHHHHHHHHHH-------HcccCCeEEEEEEec
Confidence 1359999999998543 33333333 233458555555554
No 86
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=1.3e-11 Score=110.56 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=83.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHHH-HHHHHHHhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLN-ERQVKTPISATQKDARDF-LQTDARAHL 234 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~-~~~~~~~~~ 234 (324)
+.++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|++.+ + .. ++++.++|+.+. +.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~-~v~~~~~d~~~~~~~------- 163 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VE-NVRFHLGKLEEAELE------- 163 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CC-CEEEEESCGGGCCCC-------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CC-CEEEEECchhhcCCC-------
Confidence 468899999999999999999986 579999999999999999999998 7 54 799999998764 11
Q ss_pred hhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++|+|.. ..++..+.. |+++ |.+.+++...
T Consensus 164 ------------~~~~D~v~~~~~~~-~~~l~~~~~~L~~g--------G~l~~~~~~~ 201 (258)
T 2pwy_A 164 ------------EAAYDGVALDLMEP-WKVLEKAALALKPD--------RFLVAYLPNI 201 (258)
T ss_dssp ------------TTCEEEEEEESSCG-GGGHHHHHHHEEEE--------EEEEEEESCH
T ss_pred ------------CCCcCEEEECCcCH-HHHHHHHHHhCCCC--------CEEEEEeCCH
Confidence 13499999999873 456666655 7765 8888887654
No 87
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.24 E-value=4e-11 Score=105.38 Aligned_cols=101 Identities=15% Similarity=0.063 Sum_probs=73.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.+|.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+.++++... ++.++.+|+.+......
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~-----~v~~~~~d~~~~~~~~~------- 122 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN-----NIIPLLFDASKPWKYSG------- 122 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS-----SEEEECSCTTCGGGTTT-------
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC-----CeEEEEcCCCCchhhcc-------
Confidence 4588999999999999999999853 599999999999988877776432 68899999875311000
Q ss_pred cccCCCCCCCCcccEEEECChhh--hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT--AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~--a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
....||.|++|.+.. ...++..+.. |+++ |.+.+.
T Consensus 123 --------~~~~fD~V~~~~~~~~~~~~~l~~~~r~Lkpg--------G~l~i~ 160 (210)
T 1nt2_A 123 --------IVEKVDLIYQDIAQKNQIEILKANAEFFLKEK--------GEVVIM 160 (210)
T ss_dssp --------TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred --------cccceeEEEEeccChhHHHHHHHHHHHHhCCC--------CEEEEE
Confidence 013599999996543 2234565655 7876 776655
No 88
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.24 E-value=6.1e-11 Score=113.82 Aligned_cols=107 Identities=14% Similarity=0.071 Sum_probs=77.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCC-EEEEEeCCHHHHHHHHHHH-------HHhCCCCC-CCeEEEeccHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGA-IVAANDLNPDSYAWLQASI-------RLNERQVK-TPISATQKDARDFLQTD 229 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~-~V~avD~~~~a~~~a~~N~-------~~n~~~l~-~~v~~~~~D~~~~~~~~ 229 (324)
+.+|++|||||||+|.+++.+|+ .++ +|+|||+++.+++.|++|+ +.++ +. ++++++++|+.+.....
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G--l~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG--KKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT--BCCCEEEEEECCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC--CCCCCeEEEECcccCCcccc
Confidence 56899999999999999999986 466 6999999999999999875 3456 63 58999999998865432
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhccchhhcCCCCCCCEEEEE
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKVLTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~l~~~~~~~~~~~g~vh~y 288 (324)
.. ..||+|++|++.+..+...++... ...+++||.|.+.
T Consensus 249 ~~----------------~~aDVVf~Nn~~F~pdl~~aL~Ei----~RvLKPGGrIVss 287 (438)
T 3uwp_A 249 RI----------------ANTSVIFVNNFAFGPEVDHQLKER----FANMKEGGRIVSS 287 (438)
T ss_dssp HH----------------HTCSEEEECCTTCCHHHHHHHHHH----HTTSCTTCEEEES
T ss_pred cc----------------CCccEEEEcccccCchHHHHHHHH----HHcCCCCcEEEEe
Confidence 11 139999999876543333333220 0123445777766
No 89
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.24 E-value=1.7e-11 Score=109.16 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=83.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.+++.+++.+.+|+++|+++.+++.|++|+..++ +..+++++.+|+.+....
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~----------- 155 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFN--LGKNVKFFNVDFKDAEVP----------- 155 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTT--CCTTEEEECSCTTTSCCC-----------
T ss_pred CCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcC--CCCcEEEEEcChhhcccC-----------
Confidence 4578999999999999999999987799999999999999999999988 856899999998763200
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++|+|. ...+++.+.. ++++ |.+.+++...
T Consensus 156 -------~~~~D~v~~~~~~-~~~~l~~~~~~L~~g--------G~l~~~~~~~ 193 (248)
T 2yvl_A 156 -------EGIFHAAFVDVRE-PWHYLEKVHKSLMEG--------APVGFLLPTA 193 (248)
T ss_dssp -------TTCBSEEEECSSC-GGGGHHHHHHHBCTT--------CEEEEEESSH
T ss_pred -------CCcccEEEECCcC-HHHHHHHHHHHcCCC--------CEEEEEeCCH
Confidence 1349999999985 3345555555 6654 8888777644
No 90
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.24 E-value=6.1e-11 Score=103.36 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=82.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+++. +.+|+++|+++.+++.|++|++.++ +.++++++++|+.+++...
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~------- 124 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVGDPLGIAAGQ------- 124 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEESCHHHHHTTC-------
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEecHHHHhccC-------
Confidence 346789999999999999999985 6799999999999999999999998 8767999999998865431
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
.. ||.|++|.+.. ...+++.+.. |+++ |++.+.
T Consensus 125 ----------~~-fD~v~~~~~~~~~~~~l~~~~~~Lkpg--------G~lv~~ 159 (210)
T 3c3p_A 125 ----------RD-IDILFMDCDVFNGADVLERMNRCLAKN--------ALLIAV 159 (210)
T ss_dssp ----------CS-EEEEEEETTTSCHHHHHHHHGGGEEEE--------EEEEEE
T ss_pred ----------CC-CCEEEEcCChhhhHHHHHHHHHhcCCC--------eEEEEE
Confidence 24 99999997542 3456777666 7765 776664
No 91
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.23 E-value=4.8e-11 Score=107.45 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=83.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+|+. +++|+++|+++.+++.|++|++.++ +.++++++.+|+.+++.........
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~l~~~~~~- 153 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--VDHKIDFREGPALPVLDEMIKDEKN- 153 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHSGGG-
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHHHHHHhccCC-
Confidence 456789999999999999999984 6799999999999999999999998 8768999999999887654211000
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|++|.+.. ...+++.+.. |++ ||++.+.
T Consensus 154 ----------~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp--------GG~lv~d 189 (247)
T 1sui_A 154 ----------HGSYDFIFVDADKDNYLNYHKRLIDLVKV--------GGVIGYD 189 (247)
T ss_dssp ----------TTCBSEEEECSCSTTHHHHHHHHHHHBCT--------TCCEEEE
T ss_pred ----------CCCEEEEEEcCchHHHHHHHHHHHHhCCC--------CeEEEEe
Confidence 13599999997542 3456666655 665 4777665
No 92
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.23 E-value=4e-11 Score=111.67 Aligned_cols=85 Identities=18% Similarity=0.158 Sum_probs=70.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--C-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--G-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|++|||+|||+|+.++.+|.. + .+|+|+|+++.+++.+++|++.++ +. +++++++|+.++......
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g--~~-~v~~~~~D~~~~~~~~~~----- 171 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG--VS-CCELAEEDFLAVSPSDPR----- 171 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEECCGGGSCTTCGG-----
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--CC-eEEEEeCChHhcCccccc-----
Confidence 568999999999999999999983 3 599999999999999999999999 86 799999999875321100
Q ss_pred hcccCCCCCCCCcccEEEECChhhhH
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATAV 262 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a~ 262 (324)
...||.|++|||.++.
T Consensus 172 ----------~~~fD~Vl~D~PcSg~ 187 (309)
T 2b9e_A 172 ----------YHEVHYILLDPSCSGS 187 (309)
T ss_dssp ----------GTTEEEEEECCCCCC-
T ss_pred ----------cCCCCEEEEcCCcCCC
Confidence 0249999999998543
No 93
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.23 E-value=1.5e-11 Score=108.83 Aligned_cols=102 Identities=12% Similarity=0.025 Sum_probs=81.0
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.|++++..++ ...+++++++|+.++..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~-------------- 129 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSP--KAEYFSFVKEDVFTWRP-------------- 129 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEECCCTTTCCC--------------
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccC--CCcceEEEECchhcCCC--------------
Confidence 45599999999999999999988899999999999999999998755 44579999999886431
Q ss_pred CCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 242 GNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++ +|.....++..+.. |+++ |.+.+..+..
T Consensus 130 -----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~ 174 (235)
T 3lcc_A 130 -----TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPD--------GELITLMYPI 174 (235)
T ss_dssp -----SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEE--------EEEEEEECCC
T ss_pred -----CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCC--------cEEEEEEecc
Confidence 1359999985 23344567777766 7775 7777766654
No 94
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.23 E-value=1e-10 Score=104.40 Aligned_cols=109 Identities=14% Similarity=0.069 Sum_probs=85.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+|+. +.+|+++|+++.+++.|++|++.++ +.++++++.+|+.+++.....+.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~l~~~~--- 142 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--VEHKINFIESDAMLALDNLLQGQ--- 142 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHST---
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhcc---
Confidence 456789999999999999999984 6799999999999999999999998 87689999999999876543210
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
.....||.|++|.+.. ...+++.+.. |+++ |++.+..
T Consensus 143 --------~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG--------G~lv~d~ 181 (237)
T 3c3y_A 143 --------ESEGSYDFGFVDADKPNYIKYHERLMKLVKVG--------GIVAYDN 181 (237)
T ss_dssp --------TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE--------EEEEEEC
T ss_pred --------CCCCCcCEEEECCchHHHHHHHHHHHHhcCCC--------eEEEEec
Confidence 0013599999997653 3456777666 6765 7777664
No 95
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.23 E-value=9.6e-11 Score=104.17 Aligned_cols=109 Identities=15% Similarity=0.077 Sum_probs=84.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
..++.+|||+|||+|..++.+++. +++|+++|+|+.+++.|++|++.++ +.++++++.+|+.+.+.......
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~l~~l~~~~--- 144 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--VAEKISLRLGPALATLEQLTQGK--- 144 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHHHHHHTSS---
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhcC---
Confidence 457789999999999999999984 5699999999999999999999998 87689999999988766532100
Q ss_pred hcccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
....||.|++|.+.. ...+++.+.. |+++ |++.+...
T Consensus 145 ---------~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg--------G~lv~~~~ 183 (232)
T 3cbg_A 145 ---------PLPEFDLIFIDADKRNYPRYYEIGLNLLRRG--------GLMVIDNV 183 (232)
T ss_dssp ---------SCCCEEEEEECSCGGGHHHHHHHHHHTEEEE--------EEEEEECT
T ss_pred ---------CCCCcCEEEECCCHHHHHHHHHHHHHHcCCC--------eEEEEeCC
Confidence 003599999997642 3456666655 6665 77776543
No 96
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=2.9e-11 Score=104.49 Aligned_cols=72 Identities=24% Similarity=0.226 Sum_probs=61.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..++.+|||+|||+|.+++.+++.|. +|+|+|+|+.+++.|++|+. +++++++|+.++.
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~d~~~~~------------ 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG--------GVNFMVADVSEIS------------ 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT--------TSEEEECCGGGCC------------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC--------CCEEEECcHHHCC------------
Confidence 34788999999999999999999876 89999999999999998765 3689999988741
Q ss_pred ccCCCCCCCCcccEEEECChhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
..||.|++|||..
T Consensus 109 ---------~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 109 ---------GKYDTWIMNPPFG 121 (200)
T ss_dssp ---------CCEEEEEECCCC-
T ss_pred ---------CCeeEEEECCCch
Confidence 2399999999953
No 97
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.22 E-value=4.1e-11 Score=106.16 Aligned_cols=104 Identities=9% Similarity=0.066 Sum_probs=83.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|++.++ +.++++++++|+.+.+.....
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~------ 123 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--LESRIELLFGDALQLGEKLEL------ 123 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCGGGSHHHHTT------
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHhccc------
Confidence 457889999999999999999986 6799999999999999999999998 866899999999886543210
Q ss_pred cccCCCCCCCCcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|++|.|.. ...+++.+.. |+++ |.+.+.
T Consensus 124 ---------~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg--------G~lv~~ 159 (233)
T 2gpy_A 124 ---------YPLFDVLFIDAAKGQYRRFFDMYSPMVRPG--------GLILSD 159 (233)
T ss_dssp ---------SCCEEEEEEEGGGSCHHHHHHHHGGGEEEE--------EEEEEE
T ss_pred ---------CCCccEEEECCCHHHHHHHHHHHHHHcCCC--------eEEEEE
Confidence 13499999998763 3456777666 7765 777665
No 98
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.22 E-value=4.7e-11 Score=105.23 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=76.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-C--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-G--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.+++.+++. | .+|+|+|+|+.+++.+++|++.+. +++++++|+.+......
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~-----~v~~~~~d~~~~~~~~~------ 139 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERR-----NIVPILGDATKPEEYRA------ 139 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCT-----TEEEEECCTTCGGGGTT------
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccC-----CCEEEEccCCCcchhhc------
Confidence 457889999999999999999975 3 699999999999999999987543 79999999876321000
Q ss_pred hcccCCCCCCCCcccEEEECChhhh--HHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA--VEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a--~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
....||.|++|+|... ..++..+.. |+++ |.+.+.
T Consensus 140 ---------~~~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~ 177 (227)
T 1g8a_A 140 ---------LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRG--------GYGMIA 177 (227)
T ss_dssp ---------TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred ---------ccCCceEEEECCCCHhHHHHHHHHHHHhcCCC--------CEEEEE
Confidence 0135999999987532 244666655 7775 777766
No 99
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.22 E-value=6.9e-11 Score=101.21 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=79.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.++..+++.|.+|+|+|+|+.+++.+++++..++ ++ +++++++|+.+...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~~~~~~~d~~~~~~------------- 94 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIEN--LD-NLHTRVVDLNNLTF------------- 94 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CT-TEEEEECCGGGCCC-------------
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCC--CC-CcEEEEcchhhCCC-------------
Confidence 367899999999999999999998999999999999999999999988 75 69999999876421
Q ss_pred CCCCCCCCcccEEEECCh------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 241 EGNSTGGTAVARVIMNLP------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|+++.+ .....++..+.. |+++ |.+.+.+
T Consensus 95 ------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~g--------G~l~~~~ 136 (199)
T 2xvm_A 95 ------DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG--------GYNLIVA 136 (199)
T ss_dssp ------CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEE--------EEEEEEE
T ss_pred ------CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCC--------eEEEEEE
Confidence 135999998732 234556776666 7765 7655443
No 100
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.22 E-value=1.1e-11 Score=118.42 Aligned_cols=92 Identities=21% Similarity=0.199 Sum_probs=75.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.+|++|||+|||+|.+++.+|+.|+ +|+|||.|+ +++.|+++++.|+ +.++|+++++|+.++..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~--~~~~i~~i~~~~~~~~l------------ 146 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNG--LEDRVHVLPGPVETVEL------------ 146 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTT--CTTTEEEEESCTTTCCC------------
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcC--CCceEEEEeeeeeeecC------------
Confidence 4799999999999999999999998 999999996 7899999999999 98899999999887421
Q ss_pred cCCCCCCCCcccEEEECChhh-------hHHHHHHHhc-cchh
Q psy16898 240 SEGNSTGGTAVARVIMNLPAT-------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~-------a~~~l~~~~~-l~~~ 274 (324)
+.++|+||+++-.. -..++.+... |+++
T Consensus 147 -------pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 147 -------PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp -------SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE
T ss_pred -------CccccEEEeecccccccccchhhhHHHHHHhhCCCC
Confidence 24599999865432 1245655555 7776
No 101
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.22 E-value=9.3e-11 Score=108.21 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=78.5
Q ss_pred hhccCCCEEEEEcCCCchhH-HHHHh-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 158 KEVREGDLVLDVFAGVGPFS-IPAAR-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 158 ~~~~~g~~VLDl~~G~G~~a-l~~a~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
..+.+|++|||+|||+|+++ +.+|+ .|++|+|+|+|+.+++.|++|++..+ + ++++++++|+.++. .
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g--l-~~v~~v~gDa~~l~-d------- 186 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG--V-DGVNVITGDETVID-G------- 186 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT--C-CSEEEEESCGGGGG-G-------
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC--C-CCeEEEECchhhCC-C-------
Confidence 45789999999999999876 55566 58899999999999999999999999 8 59999999998752 1
Q ss_pred hhcccCCCCCCCCcccEEEECChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
..||+|+++--. ....+++.+.. |+++ |.+.+-.
T Consensus 187 ------------~~FDvV~~~a~~~d~~~~l~el~r~LkPG--------G~Lvv~~ 222 (298)
T 3fpf_A 187 ------------LEFDVLMVAALAEPKRRVFRNIHRYVDTE--------TRIIYRT 222 (298)
T ss_dssp ------------CCCSEEEECTTCSCHHHHHHHHHHHCCTT--------CEEEEEE
T ss_pred ------------CCcCEEEECCCccCHHHHHHHHHHHcCCC--------cEEEEEc
Confidence 349999986321 12356666655 7765 7776554
No 102
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.22 E-value=8e-11 Score=102.96 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=71.9
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCC----CeEEEeccHHHHHHHHHHHhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKT----PISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~----~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..++ +.+ +++++++|+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~~------ 99 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR--LPEMQRKRISLFQSSLVYRDKR------ 99 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG--SCHHHHTTEEEEECCSSSCCGG------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccccCcceEEEeCcccccccc------
Confidence 478899999999999999999976 599999999999999999998887 754 799999998432211
Q ss_pred hhhcccCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++ .|. ....++..+.. |+++
T Consensus 100 ------------~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (219)
T 3jwg_A 100 ------------FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQ 134 (219)
T ss_dssp ------------GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred ------------cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCC
Confidence 1359999985 222 12456666655 5554
No 103
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.21 E-value=5.8e-11 Score=103.94 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=80.1
Q ss_pred HhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
.+.+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|++|+..++ .+++++++|+.++...
T Consensus 33 ~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~-------- 100 (227)
T 1ve3_A 33 MKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARKLSFE-------- 100 (227)
T ss_dssp HHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTSCCSC--------
T ss_pred HHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhcCCCC--------
Confidence 3445678899999999999999999988899999999999999999998876 2699999998763210
Q ss_pred hcccCCCCCCCCcccEEEECCh--hh----hHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLP--AT----AVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP--~~----a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++++ .. ...++..+.. |+++ |.+.+..+
T Consensus 101 ----------~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~g--------G~l~~~~~ 143 (227)
T 1ve3_A 101 ----------DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS--------GKFIMYFT 143 (227)
T ss_dssp ----------TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE--------EEEEEEEE
T ss_pred ----------CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCC--------cEEEEEec
Confidence 135999999887 32 2346666655 6665 66655443
No 104
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.21 E-value=9.4e-11 Score=105.86 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=81.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|+++++.++ ++++++++++|+.++...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~---------- 111 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGSMDDLPFR---------- 111 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCCC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcChhhCCCC----------
Confidence 45789999999999999999999755 99999999999999999999998 877899999998764211
Q ss_pred ccCCCCCCCCcccEEEECChhh---hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT---AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~---a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|+++.+-. ...++..+.. |+++ |.+.+.++.
T Consensus 112 --------~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~ 152 (267)
T 3kkz_A 112 --------NEELDLIWSEGAIYNIGFERGLNEWRKYLKKG--------GYLAVSECS 152 (267)
T ss_dssp --------TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEE--------EEEEEEEEE
T ss_pred --------CCCEEEEEEcCCceecCHHHHHHHHHHHcCCC--------CEEEEEEee
Confidence 24599999976542 2345555555 6665 777766543
No 105
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.21 E-value=5.4e-11 Score=102.63 Aligned_cols=108 Identities=20% Similarity=0.160 Sum_probs=83.1
Q ss_pred HHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 155 RVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 155 ~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.++..+.++ +|||+|||+|.++..+++.|++|+|+|+|+.+++.|++++..++ + ++.++++|+.+....
T Consensus 23 ~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~~------ 91 (202)
T 2kw5_A 23 SVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKG--V--KITTVQSNLADFDIV------ 91 (202)
T ss_dssp HHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHT--C--CEEEECCBTTTBSCC------
T ss_pred HHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcC--C--ceEEEEcChhhcCCC------
Confidence 345567778 99999999999999999998999999999999999999999888 5 599999998764211
Q ss_pred hhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++... ....++..+.. |++ +|.+.+.++...
T Consensus 92 ------------~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~p--------gG~l~~~~~~~~ 135 (202)
T 2kw5_A 92 ------------ADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKP--------GGVFILEGFAPE 135 (202)
T ss_dssp ------------TTTCSEEEEECCCCCHHHHHHHHHHHHTTCCS--------SEEEEEEEECTT
T ss_pred ------------cCCccEEEEEhhcCCHHHHHHHHHHHHHhcCC--------CcEEEEEEeccc
Confidence 1359999987533 23445555554 444 588887776543
No 106
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.20 E-value=7.8e-11 Score=109.17 Aligned_cols=106 Identities=15% Similarity=0.020 Sum_probs=83.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.++++ +++|+|+|+++.+++.|++|+..++ +.++++++++|+.++...
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~---------- 182 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLDTPFD---------- 182 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCCC----------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhcCCCC----------
Confidence 457889999999999999999997 8899999999999999999999999 877899999998764211
Q ss_pred ccCCCCCCCCcccEEEECChh---hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA---TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~---~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++-.- ....++..+.. |+++ |.+.+.++...
T Consensus 183 --------~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~~ 225 (312)
T 3vc1_A 183 --------KGAVTASWNNESTMYVDLHDLFSEHSRFLKVG--------GRYVTITGCWN 225 (312)
T ss_dssp --------TTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE--------EEEEEEEEEEC
T ss_pred --------CCCEeEEEECCchhhCCHHHHHHHHHHHcCCC--------cEEEEEEcccc
Confidence 2459999885221 13456666665 7765 77776655443
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.20 E-value=3.4e-11 Score=104.69 Aligned_cols=77 Identities=13% Similarity=0.060 Sum_probs=67.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|++|+..++ +. +++++.+|+.+....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~----------- 140 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLD--LH-NVSTRHGDGWQGWQA----------- 140 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEESCGGGCCGG-----------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcC--CC-ceEEEECCcccCCcc-----------
Confidence 4688999999999999999999998899999999999999999999998 87 799999999874332
Q ss_pred cCCCCCCCCcccEEEECC
Q psy16898 240 SEGNSTGGTAVARVIMNL 257 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~np 257 (324)
...||.|+++.
T Consensus 141 -------~~~~D~i~~~~ 151 (210)
T 3lbf_A 141 -------RAPFDAIIVTA 151 (210)
T ss_dssp -------GCCEEEEEESS
T ss_pred -------CCCccEEEEcc
Confidence 13599999973
No 108
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.20 E-value=1.2e-10 Score=104.15 Aligned_cols=101 Identities=16% Similarity=0.050 Sum_probs=72.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+++|++|||+|||+|.++..+|+. ..+|+|+|+++.+++.+.+.++... |+.++.+|+........
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~-----nv~~i~~Da~~~~~~~~------ 142 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP-----NIFPLLADARFPQSYKS------ 142 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT-----TEEEEECCTTCGGGTTT------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC-----CeEEEEcccccchhhhc------
Confidence 458999999999999999999984 3499999999999877766555432 79999999875311100
Q ss_pred hcccCCCCCCCCcccEEEECChh--hhHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA--TAVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~--~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
....||.|++|.|. ....+...+.. |+++ |.+.+.
T Consensus 143 ---------~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpG--------G~lvis 180 (232)
T 3id6_C 143 ---------VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVN--------GDMLLV 180 (232)
T ss_dssp ---------TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred ---------cccceEEEEecCCChhHHHHHHHHHHHhCCCC--------eEEEEE
Confidence 01359999999654 22234455553 7775 776655
No 109
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.20 E-value=2.2e-10 Score=102.01 Aligned_cols=116 Identities=11% Similarity=0.068 Sum_probs=83.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh-h
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL-V 235 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~-~ 235 (324)
..++.+|||+|||+|.+++.+++. +++|+++|+++.+++.|++|+..++ +.++++++.+|+.+.+........ .
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 457889999999999999999985 5799999999999999999999998 876799999999887654321000 0
Q ss_pred hhcccCCCCCCC--CcccEEEECChhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 236 RWSQSEGNSTGG--TAVARVIMNLPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 236 ~~~~~~~~~~~~--~~fD~Vi~npP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
.|.. .-.. ..||.|+++.... ...+++.+.. |+++ |++.+..
T Consensus 136 ~~~~----~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg--------G~lv~~~ 181 (239)
T 2hnk_A 136 SWAS----DFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG--------GLLIADN 181 (239)
T ss_dssp GGGT----TTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE--------EEEEEEC
T ss_pred cccc----cccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC--------eEEEEEc
Confidence 0000 0000 3599999996543 2356666655 7765 7777654
No 110
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.20 E-value=1.1e-10 Score=106.92 Aligned_cols=106 Identities=8% Similarity=0.073 Sum_probs=84.2
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc-C-CEEEEEeCCHHHHHHHHHHHHH--hCCCC-CCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR-G-AIVAANDLNPDSYAWLQASIRL--NERQV-KTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~-g-~~V~avD~~~~a~~~a~~N~~~--n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
..+.+|||+|||+|.++..+++. + .+|+++|+++.+++.|++|+.. ++ + ..+++++.+|+.+++...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~--~~~~rv~v~~~D~~~~l~~~------ 145 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK--LDDPRVDVQVDDGFMHIAKS------ 145 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT--TTSTTEEEEESCSHHHHHTC------
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc--cCCCceEEEECcHHHHHhhC------
Confidence 46789999999999999999986 4 5999999999999999999864 23 4 248999999999876541
Q ss_pred hhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|+|.. ..+|++.+.. |+++ |++.+.+.++.
T Consensus 146 -----------~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg--------G~lv~~~~~~~ 193 (275)
T 1iy9_A 146 -----------ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED--------GIFVAQTDNPW 193 (275)
T ss_dssp -----------CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE--------EEEEEECCCTT
T ss_pred -----------CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC--------cEEEEEcCCcc
Confidence 24599999999762 2567777766 7775 88877765543
No 111
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.19 E-value=5.5e-11 Score=115.48 Aligned_cols=82 Identities=21% Similarity=0.263 Sum_probs=69.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+|.+|||+|||+|.+++.+++.+ .+|+|+|+++.+++.+++|++.++ +. ++++++|+.++.....
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g--~~--~~~~~~D~~~~~~~~~------- 312 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG--MK--ATVKQGDGRYPSQWCG------- 312 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT--CC--CEEEECCTTCTHHHHT-------
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC--CC--eEEEeCchhhchhhcc-------
Confidence 5688999999999999999999854 699999999999999999999999 74 7999999987643211
Q ss_pred cccCCCCCCCCcccEEEECChhhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
...||.|++|||.++
T Consensus 313 ---------~~~fD~Vl~D~Pcsg 327 (429)
T 1sqg_A 313 ---------EQQFDRILLDAPCSA 327 (429)
T ss_dssp ---------TCCEEEEEEECCCCC
T ss_pred ---------cCCCCEEEEeCCCCc
Confidence 135999999999753
No 112
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.19 E-value=6.5e-11 Score=104.93 Aligned_cols=104 Identities=14% Similarity=0.023 Sum_probs=79.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+.++++.+. +++++++|+.+...-...
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~-----~v~~~~~d~~~~~~~~~~----- 144 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT-----NIIPVIEDARHPHKYRML----- 144 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCT-----TEEEECSCTTCGGGGGGG-----
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccC-----CeEEEEcccCChhhhccc-----
Confidence 457889999999999999999985 3699999999999999999998764 699999999863210000
Q ss_pred hcccCCCCCCCCcccEEEECChhhh--HHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA--VEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a--~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|++|+|... ..++..+.. |+++ |++.+.+..
T Consensus 145 ----------~~~~D~V~~~~~~~~~~~~~~~~~~~~Lkpg--------G~l~i~~~~ 184 (233)
T 2ipx_A 145 ----------IAMVDVIFADVAQPDQTRIVALNAHTFLRNG--------GHFVISIKA 184 (233)
T ss_dssp ----------CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE--------EEEEEEEEH
T ss_pred ----------CCcEEEEEEcCCCccHHHHHHHHHHHHcCCC--------eEEEEEEcc
Confidence 135999999998432 335654444 7775 888776554
No 113
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.19 E-value=4.6e-11 Score=103.48 Aligned_cols=98 Identities=18% Similarity=0.164 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+|||+|.+++.+++. +.+|+++|+|+.+++.+++|+..++ +. +++++++|+.++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~------------ 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK--LE-NIEPVQSRVEEFPS------------ 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT--CS-SEEEEECCTTTSCC------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC--CC-CeEEEecchhhCCc------------
Confidence 5789999999999999999985 6799999999999999999999998 87 59999999876431
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|+++.-.....++..+.. ++++ |++.+..
T Consensus 130 -------~~~~D~i~~~~~~~~~~~l~~~~~~L~~g--------G~l~~~~ 165 (207)
T 1jsx_A 130 -------EPPFDGVISRAFASLNDMVSWCHHLPGEQ--------GRFYALK 165 (207)
T ss_dssp -------CSCEEEEECSCSSSHHHHHHHHTTSEEEE--------EEEEEEE
T ss_pred -------cCCcCEEEEeccCCHHHHHHHHHHhcCCC--------cEEEEEe
Confidence 135999999854434567777766 6665 7776653
No 114
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.19 E-value=9.6e-11 Score=104.69 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=81.7
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDAR 231 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~ 231 (324)
.+++. +.++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.|+++++.++ +.++++++++|+.+...
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---- 100 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHNDAAGYVA---- 100 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCCTTCCC----
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECChHhCCc----
Confidence 34443 458899999999999999999985 7799999999999999999999988 87689999999876432
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||+|++...- ....++..+.. |+++ |.+.+..
T Consensus 101 ---------------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg--------G~l~~~~ 140 (256)
T 1nkv_A 101 ---------------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPG--------GIMLIGE 140 (256)
T ss_dssp ---------------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE--------EEEEEEE
T ss_pred ---------------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC--------eEEEEec
Confidence 1359999984211 13456666666 7765 7766553
No 115
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.19 E-value=1.1e-10 Score=101.93 Aligned_cols=94 Identities=11% Similarity=-0.011 Sum_probs=72.0
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHhCCCCCC----CeEEEeccHHHHHHHHHHHhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLNERQVKT----PISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n~~~l~~----~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.++.+|||+|||+|.++..+++.+ ++|+|+|+|+.+++.|++|+..++ +.+ +++++++|+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~~------ 99 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLR--LPRNQWERLQLIQGALTYQDKR------ 99 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCC--CCHHHHTTEEEEECCTTSCCGG------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhc--CCcccCcceEEEeCCccccccc------
Confidence 477899999999999999999965 599999999999999999998887 753 799999997432111
Q ss_pred hhhcccCCCCCCCCcccEEEECC-----hh-hhHHHHHHHhc-cchh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNL-----PA-TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~np-----P~-~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++- |. ....++..+.. |+++
T Consensus 100 ------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (217)
T 3jwh_A 100 ------------FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPK 134 (217)
T ss_dssp ------------GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred ------------CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 13599999853 22 12456666655 5554
No 116
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.19 E-value=1.1e-10 Score=108.54 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=82.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHH--hCCCC-CCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRL--NERQV-KTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~--n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++|+.. ++ + ..+++++.+|+.+++...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~--~~~~rv~v~~~Da~~~l~~~------ 165 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG--YSSSKLTLHVGDGFEFMKQN------ 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHHHTC------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcc--cCCCcEEEEECcHHHHHhhC------
Confidence 467899999999999999999863 5999999999999999999875 34 4 348999999999876531
Q ss_pred hhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|+|.. ..+|++.+.. |+++ |++.+...+..
T Consensus 166 -----------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~~~~~ 213 (304)
T 2o07_A 166 -----------QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED--------GVLCCQGECQW 213 (304)
T ss_dssp -----------SSCEEEEEEECC-----------CHHHHHHHHHEEEE--------EEEEEEEECTT
T ss_pred -----------CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC--------eEEEEecCCcc
Confidence 24599999998862 1346666655 7765 88887765543
No 117
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.18 E-value=3.5e-11 Score=109.37 Aligned_cols=105 Identities=18% Similarity=0.189 Sum_probs=84.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHh--CCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLN--ERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n--~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
+.++.+|||+|||+|.+++.+++. +.+|+++|+++.+++.|++|+..+ + +.++++++++|+.+....
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~~~------ 168 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSELP------ 168 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCCCC------
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcCCC------
Confidence 568899999999999999999985 569999999999999999999887 3 445899999998764211
Q ss_pred hhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++|+|. ...++..+.. |+++ |.+.+++....
T Consensus 169 ------------~~~~D~v~~~~~~-~~~~l~~~~~~L~pg--------G~l~~~~~~~~ 207 (280)
T 1i9g_A 169 ------------DGSVDRAVLDMLA-PWEVLDAVSRLLVAG--------GVLMVYVATVT 207 (280)
T ss_dssp ------------TTCEEEEEEESSC-GGGGHHHHHHHEEEE--------EEEEEEESSHH
T ss_pred ------------CCceeEEEECCcC-HHHHHHHHHHhCCCC--------CEEEEEeCCHH
Confidence 1359999999986 3456666665 7765 88888876653
No 118
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=2.2e-11 Score=110.44 Aligned_cols=86 Identities=20% Similarity=0.267 Sum_probs=68.2
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
++++. +.++++|||+|||+|.++..+++++++|+|+|+++.+++.+++++... ++++++++|+.++......
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~-----~~v~~i~~D~~~~~~~~~~- 93 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ-----KNITIYQNDALQFDFSSVK- 93 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC-----TTEEEEESCTTTCCGGGSC-
T ss_pred HHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC-----CCcEEEEcchHhCCHHHhc-
Confidence 34443 457899999999999999999999999999999999999999998642 2799999999876322100
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
.+..|| ||.|||+.
T Consensus 94 -------------~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 94 -------------TDKPLR-VVGNLPYN 107 (255)
T ss_dssp -------------CSSCEE-EEEECCHH
T ss_pred -------------cCCCeE-EEecCCcc
Confidence 012377 99999995
No 119
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.18 E-value=7.7e-11 Score=115.18 Aligned_cols=83 Identities=22% Similarity=0.291 Sum_probs=69.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh--cC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR--RG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~--~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|++|||+|||+|.+++.++. .+ .+|+|+|+++.+++.+++|++.++ +. +++++++|+.++....
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g--~~-~v~~~~~D~~~~~~~~------- 326 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG--IK-IVKPLVKDARKAPEII------- 326 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT--CC-SEEEECSCTTCCSSSS-------
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC--CC-cEEEEEcChhhcchhh-------
Confidence 56889999999999999999998 34 699999999999999999999999 86 7999999987642110
Q ss_pred hcccCCCCCCCCcccEEEECChhhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
....||.|++|||.++
T Consensus 327 ---------~~~~fD~Vl~D~Pcsg 342 (450)
T 2yxl_A 327 ---------GEEVADKVLLDAPCTS 342 (450)
T ss_dssp ---------CSSCEEEEEEECCCCC
T ss_pred ---------ccCCCCEEEEcCCCCC
Confidence 0135999999999853
No 120
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.18 E-value=1.3e-10 Score=107.79 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=83.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++. |++|+|+|+|+.+++.|++++..++ +.++++++.+|+.++.
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~------------ 153 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWEDFA------------ 153 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGGCC------------
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHHCC------------
Confidence 357889999999999999999987 8899999999999999999999888 7768999999987641
Q ss_pred ccCCCCCCCCcccEEEEC-----Ch-hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCC
Q psy16898 239 QSEGNSTGGTAVARVIMN-----LP-ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~n-----pP-~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
..||+|++. .| .....++..+.. |++ ||.+.+..+....
T Consensus 154 ---------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp--------gG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 ---------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA--------DGRMTVQSSVSYH 199 (318)
T ss_dssp ---------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT--------TCEEEEEEEECCC
T ss_pred ---------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC--------CcEEEEEEeccCC
Confidence 249999987 32 234556666655 665 4888877776654
No 121
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.18 E-value=5.9e-11 Score=110.59 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=81.5
Q ss_pred EeccceeecCcChHHHHHHHhh--ccCCCEEEEEcCCCchhHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHhCCCCC
Q psy16898 138 MDFSKVYWNSRLSTEHERVTKE--VREGDLVLDVFAGVGPFSIPAARRG---AIVAANDLNPDSYAWLQASIRLNERQVK 212 (324)
Q Consensus 138 id~~~~f~~~r~~~e~~~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g---~~V~avD~~~~a~~~a~~N~~~n~~~l~ 212 (324)
++...||+..........+++. +.++.+|||+|||+|.+++.+++.+ .+|+++|+|+.+++.|++|++.++ +.
T Consensus 49 l~~~~f~q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g--~~ 126 (317)
T 1dl5_A 49 YDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG--IE 126 (317)
T ss_dssp EECSSCEEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT--CC
T ss_pred ccCCCcceeccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC--CC
Confidence 3444455443322223344443 4688999999999999999999854 369999999999999999999998 87
Q ss_pred CCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchh
Q psy16898 213 TPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 213 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~ 274 (324)
+++++++|+.+.+.. ...||.|+++.+.... .+.+.. |+++
T Consensus 127 -~v~~~~~d~~~~~~~------------------~~~fD~Iv~~~~~~~~--~~~~~~~Lkpg 168 (317)
T 1dl5_A 127 -NVIFVCGDGYYGVPE------------------FSPYDVIFVTVGVDEV--PETWFTQLKEG 168 (317)
T ss_dssp -SEEEEESCGGGCCGG------------------GCCEEEEEECSBBSCC--CHHHHHHEEEE
T ss_pred -CeEEEECChhhcccc------------------CCCeEEEEEcCCHHHH--HHHHHHhcCCC
Confidence 699999999874332 1349999999775321 133333 6665
No 122
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.18 E-value=1.2e-10 Score=107.66 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=81.2
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc-C-CEEEEEeCCHHHHHHHHHHHHH--hCCCC-CCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR-G-AIVAANDLNPDSYAWLQASIRL--NERQV-KTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~-g-~~V~avD~~~~a~~~a~~N~~~--n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
..+.+|||+|||+|.++..+++. + .+|+++|+++.+++.|++|+.. ++ + ..+++++.+|+.+++...
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCG--FDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccc--cCCCceEEEECcHHHHHhhC------
Confidence 46689999999999999999986 3 5999999999999999999865 33 4 248999999999876431
Q ss_pred hhcccCCCCCCCCcccEEEECChhh---------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT---------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~---------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|+|.. ..++++.+.. |+++ |++.+.+.++.
T Consensus 161 -----------~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~~~~~ 209 (296)
T 1inl_A 161 -----------KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED--------GVFSAETEDPF 209 (296)
T ss_dssp -----------SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE--------EEEEEECCCTT
T ss_pred -----------CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC--------cEEEEEccCcc
Confidence 13599999998753 1467777666 7765 88887765543
No 123
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.17 E-value=5.4e-10 Score=104.54 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=83.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH--hCCCC-CCCeEEEeccHHHHHHHHHHHhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL--NERQV-KTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~--n~~~l-~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++|+.. ++ + ..+++++++|+.+++...
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~----- 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENV----- 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHC-----
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccc--cCCCcEEEEEccHHHHHhhc-----
Confidence 346789999999999999999986 46999999999999999999875 34 4 247999999999876531
Q ss_pred hhhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|++.. ..++++.+.. |+++ |++.+...++.
T Consensus 187 ------------~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~~~~~ 234 (321)
T 2pt6_A 187 ------------TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN--------GYCVAQCESLW 234 (321)
T ss_dssp ------------CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE--------EEEEEEECCTT
T ss_pred ------------CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC--------cEEEEEcCCcc
Confidence 13599999998421 1567777766 7775 88877655543
No 124
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.17 E-value=8.3e-11 Score=106.35 Aligned_cols=97 Identities=18% Similarity=0.080 Sum_probs=71.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH----------hCC----CCCCCeEEEeccHHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRL----------NER----QVKTPISATQKDARDFL 226 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~----------n~~----~l~~~v~~~~~D~~~~~ 226 (324)
.++.+|||+|||+|..+..+|+.|++|+|+|+|+.|++.|+++... ++. ....+++++++|+.++.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4788999999999999999999999999999999999999876532 100 00137999999998754
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchh
Q psy16898 227 QTDARAHLVRWSQSEGNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~ 274 (324)
... ...||.|++. +|.....++..+.. |+++
T Consensus 147 ~~~-----------------~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 147 RAN-----------------IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE 184 (252)
T ss_dssp GGC-----------------CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE
T ss_pred ccc-----------------CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC
Confidence 320 1359999964 23333457777766 7775
No 125
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.17 E-value=1.5e-10 Score=103.40 Aligned_cols=103 Identities=9% Similarity=0.022 Sum_probs=80.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..++ +.++++++++|+.++...
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~---------- 111 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKAN--CADRVKGITGSMDNLPFQ---------- 111 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCSSC----------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCCCC----------
Confidence 45788999999999999999999754 99999999999999999999999 887799999998654211
Q ss_pred ccCCCCCCCCcccEEEECChh---hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA---TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~---~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||+|+++..- ....++..+.. |+++ |.+.+.+.
T Consensus 112 --------~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg--------G~l~~~~~ 151 (257)
T 3f4k_A 112 --------NEELDLIWSEGAIYNIGFERGMNEWSKYLKKG--------GFIAVSEA 151 (257)
T ss_dssp --------TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE--------EEEEEEEE
T ss_pred --------CCCEEEEEecChHhhcCHHHHHHHHHHHcCCC--------cEEEEEEe
Confidence 2459999986322 12346666665 7765 77776653
No 126
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.17 E-value=9.3e-11 Score=102.94 Aligned_cols=109 Identities=18% Similarity=0.227 Sum_probs=84.0
Q ss_pred HhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC----CCeEEEeccHHHHHHHHHHH
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVK----TPISATQKDARDFLQTDARA 232 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~----~~v~~~~~D~~~~~~~~~~~ 232 (324)
...+.++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.+++++..++ +. +++.++++|+.++...
T Consensus 25 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~---- 98 (235)
T 3sm3_A 25 HNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPG--LNQKTGGKAEFKVENASSLSFH---- 98 (235)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCS--CCSSSSCEEEEEECCTTSCCSC----
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcC--CccccCcceEEEEecccccCCC----
Confidence 3456789999999999999999999999999999999999999999998776 52 3689999998754211
Q ss_pred hhhhhcccCCCCCCCCcccEEEECCh-------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLP-------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP-------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++.. .....++..+.. |+++ |.+.+..+...
T Consensus 99 --------------~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~~ 145 (235)
T 3sm3_A 99 --------------DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG--------AYLYLVEFGQN 145 (235)
T ss_dssp --------------TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE--------EEEEEEEEBCC
T ss_pred --------------CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC--------eEEEEEECCcc
Confidence 245999998632 222356777666 7765 88877766553
No 127
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.16 E-value=8.2e-11 Score=105.21 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=76.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH------hCCCCCCCeEEEeccHHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL------NERQVKTPISATQKDARDFLQTDAR 231 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~------n~~~l~~~v~~~~~D~~~~~~~~~~ 231 (324)
..++.+|||+|||+|.+++.+|+. +..|+|+|+++.+++.|++|++. ++ +. ++.++++|+.+.+.....
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~--~~-nv~~~~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG--FQ-NIACLRSNAMKHLPNFFY 120 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC--CT-TEEEEECCTTTCHHHHCC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC--CC-eEEEEECcHHHhhhhhCC
Confidence 346679999999999999999985 56999999999999999999864 34 54 899999999874432111
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChhhh------------HHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPATA------------VEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a------------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|+++.|.-- ..++..+.. |+++ |.+++-+
T Consensus 121 ---------------~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG--------G~l~~~t 168 (235)
T 3ckk_A 121 ---------------KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVG--------GLVYTIT 168 (235)
T ss_dssp ---------------TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred ---------------CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCC--------CEEEEEe
Confidence 135999998765421 257777766 7775 6666554
No 128
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.16 E-value=1.4e-10 Score=105.71 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=81.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++ .|++|+|+|+|+.+++.+++++...+ +.++++++.+|+.++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~------------ 127 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSE--NLRSKRVLLAGWEQFD------------ 127 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCC--CCSCEEEEESCGGGCC------------
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CCCCeEEEECChhhCC------------
Confidence 45788999999999999999994 67899999999999999999999887 7668999999986532
Q ss_pred ccCCCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 239 QSEGNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
..||.|++. ++.....++..+.. |+++ |.+.+..+...
T Consensus 128 ---------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~~ 172 (287)
T 1kpg_A 128 ---------EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD--------GVMLLHTITGL 172 (287)
T ss_dssp ---------CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT--------CEEEEEEEEEC
T ss_pred ---------CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC--------CEEEEEEecCC
Confidence 249999986 22234556666655 6654 88877766553
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.16 E-value=8e-11 Score=104.32 Aligned_cols=101 Identities=17% Similarity=0.073 Sum_probs=76.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-C-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-G-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.+++.+++. | .+|+|+|+|+.+++.|++|++.+. ++.++.+|+.+.......
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~v~~~~~d~~~~~~~~~~------ 140 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERE-----NIIPILGDANKPQEYANI------ 140 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCT-----TEEEEECCTTCGGGGTTT------
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCC-----CeEEEECCCCCccccccc------
Confidence 457889999999999999999986 4 699999999999999999986543 799999998762110000
Q ss_pred cccCCCCCCCCcccEEEECChhh--hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT--AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~--a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|+.++|.. ...++..+.. |+++ |.+.+.
T Consensus 141 ---------~~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~ 177 (230)
T 1fbn_A 141 ---------VEKVDVIYEDVAQPNQAEILIKNAKWFLKKG--------GYGMIA 177 (230)
T ss_dssp ---------SCCEEEEEECCCSTTHHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred ---------CccEEEEEEecCChhHHHHHHHHHHHhCCCC--------cEEEEE
Confidence 13599999998763 2456666665 7776 777664
No 130
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.16 E-value=1.7e-10 Score=105.88 Aligned_cols=104 Identities=14% Similarity=0.101 Sum_probs=81.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHh--CCCC--------CCCeEEEeccHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLN--ERQV--------KTPISATQKDARDFLQT 228 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n--~~~l--------~~~v~~~~~D~~~~~~~ 228 (324)
..++.+|||+|||+|.++..+++.+. +|+++|+++.+++.|++|+ .. + + ..+++++.+|+.+++..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~--l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNG--LLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTT--HHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccc--cccccccCCCCcEEEEECchHHHhcc
Confidence 35678999999999999999998754 9999999999999999998 32 2 3 24799999999987654
Q ss_pred HHHHhhhhhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 229 DARAHLVRWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
. ..||+|++|+|.. ..+|++.+.. |+++ |++.+.+-+.
T Consensus 150 --~----------------~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg--------G~lv~~~~~~ 196 (281)
T 1mjf_A 150 --N----------------RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP--------GIYVTQAGSV 196 (281)
T ss_dssp --C----------------CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE--------EEEEEEEEET
T ss_pred --c----------------CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC--------cEEEEEcCCc
Confidence 1 3499999999841 2567777766 7765 7777765444
No 131
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.16 E-value=3.3e-11 Score=110.86 Aligned_cols=84 Identities=21% Similarity=0.287 Sum_probs=71.0
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
++++. +.++.+|||+|||+|.++..+++.+++|+|+|+++.+++.+++++..++ +.++++++++|+.++..
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~~~----- 91 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKTDL----- 91 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTSCC-----
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceecccc-----
Confidence 34443 4578899999999999999999998999999999999999999998776 64589999999876411
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
..||.|++|+|+.
T Consensus 92 ---------------~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 92 ---------------PFFDTCVANLPYQ 104 (285)
T ss_dssp ---------------CCCSEEEEECCGG
T ss_pred ---------------hhhcEEEEecCcc
Confidence 2499999999985
No 132
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.16 E-value=1.7e-10 Score=102.61 Aligned_cols=107 Identities=16% Similarity=0.103 Sum_probs=83.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++..++ ++ +++++.+|+.++...
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~----------- 84 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKG--VE-NVRFQQGTAESLPFP----------- 84 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT--CC-SEEEEECBTTBCCSC-----------
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC--CC-CeEEEecccccCCCC-----------
Confidence 5688999999999999999999988899999999999999999999988 76 799999998753211
Q ss_pred cCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCC
Q psy16898 240 SEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMD 295 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~ 295 (324)
...||.|+++..- ....++..+.. |+++ |.+.+..+.....
T Consensus 85 -------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~~~~ 130 (239)
T 1xxl_A 85 -------DDSFDIITCRYAAHHFSDVRKAVREVARVLKQD--------GRFLLVDHYAPED 130 (239)
T ss_dssp -------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEEECBCSS
T ss_pred -------CCcEEEEEECCchhhccCHHHHHHHHHHHcCCC--------cEEEEEEcCCCCC
Confidence 2459999987322 12456666655 7765 7777765554433
No 133
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.16 E-value=7.9e-11 Score=108.31 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=85.7
Q ss_pred hHHHHHHHhhcc-CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC--CCeEEEeccHHHHH
Q psy16898 150 STEHERVTKEVR-EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVK--TPISATQKDARDFL 226 (324)
Q Consensus 150 ~~e~~~~~~~~~-~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~--~~v~~~~~D~~~~~ 226 (324)
..+...+++.+. ++.+|||+|||+|.++..+++.|.+|+|+|+|+.+++.|++++..++ +. .+++++++|+.++.
T Consensus 69 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 69 TSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAP--ADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSC--HHHHTTEEEEECBTTBCC
T ss_pred cHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcc--cccccceEEEeCchhcCC
Confidence 344445555543 45699999999999999999999999999999999999999998765 42 47999999988642
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccEEEEC-------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 227 QTDARAHLVRWSQSEGNSTGGTAVARVIMN-------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~n-------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
. ...||.|++. +|.....++..+.. |+++ |.+.+..+...
T Consensus 147 ~-------------------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~~ 194 (299)
T 3g2m_A 147 L-------------------DKRFGTVVISSGSINELDEADRRGLYASVREHLEPG--------GKFLLSLAMSE 194 (299)
T ss_dssp C-------------------SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEE--------EEEEEEEECCH
T ss_pred c-------------------CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCC--------cEEEEEeecCc
Confidence 2 1359999864 22223556776666 7775 77777666553
No 134
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.15 E-value=8.8e-10 Score=104.19 Aligned_cols=127 Identities=15% Similarity=0.104 Sum_probs=91.0
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHH-hCCCCC----CCeEEEeccHHHHHHHHHHHhhh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRL-NERQVK----TPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~-n~~~l~----~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
.+++|||+|||+|.++..+++.+. +|++||+++.+++.|++|+.. ++..++ ++++++.+|+++++......
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~--- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE--- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH---
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc---
Confidence 578999999999999999998765 999999999999999999752 210022 26999999999999864321
Q ss_pred hhcccCCCCCCCCcccEEEECChh----------hhHHHHHHH----hc-cchhhcCCCCCCCEEEEEEcccCCChhHHh
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPA----------TAVEYVRYL----KV-LTREEFGKLSRPPVLYLYCFLPKMDLETKK 300 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~----------~a~~~l~~~----~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~ 300 (324)
...||+||+|||+ .+.+|...+ .. |++ +|++.+.+.+... ++...
T Consensus 265 -----------~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p--------gGilv~qs~s~~~-~e~~~ 324 (364)
T 2qfm_A 265 -----------GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ--------DGKYFTQGNCVNL-TEALS 324 (364)
T ss_dssp -----------TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE--------EEEEEEEEEETTC-HHHHH
T ss_pred -----------CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC--------CcEEEEEcCCcch-HHHHH
Confidence 2459999999965 234666665 33 555 4888888777765 32222
Q ss_pred H----hhhcCCCceE
Q psy16898 301 K----IKSYDPSYAT 311 (324)
Q Consensus 301 ~----v~~y~~~~~~ 311 (324)
. +++..+.+..
T Consensus 325 ~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 325 LYEEQLGRLYCPVEF 339 (364)
T ss_dssp HHHHHHTTSSSCEEE
T ss_pred HHHHHHHHhCCceEE
Confidence 2 4456666654
No 135
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.15 E-value=2.5e-10 Score=98.70 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=62.4
Q ss_pred HhhccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.+.+.+.++|||+|||+|++|+.++.. +++|+|+|+|+.|++.+++|+..++ +.+++++ .|......
T Consensus 44 ~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~~~~~~------- 112 (200)
T 3fzg_A 44 FGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNKESDVY------- 112 (200)
T ss_dssp HHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECCHHHHT-------
T ss_pred HhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--ecccccCC-------
Confidence 344677889999999999999999874 6799999999999999999999999 7756766 55544221
Q ss_pred hhhcccCCCCCCCCcccEEEEC
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMN 256 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~n 256 (324)
+..||+|++.
T Consensus 113 ------------~~~~DvVLa~ 122 (200)
T 3fzg_A 113 ------------KGTYDVVFLL 122 (200)
T ss_dssp ------------TSEEEEEEEE
T ss_pred ------------CCCcChhhHh
Confidence 2459999775
No 136
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.14 E-value=2.1e-10 Score=104.49 Aligned_cols=102 Identities=22% Similarity=0.184 Sum_probs=80.4
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.|++++..++ +..+++++++|+.+.....
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~------------ 133 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHL------------ 133 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGC------------
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhc------------
Confidence 56799999999999999999999999999999999999999999888 8668999999998764211
Q ss_pred CCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 242 GNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++-.- ....++..+.. |+++ |.+.+..+
T Consensus 134 -----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~ 174 (285)
T 4htf_A 134 -----ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPG--------GVLSLMFY 174 (285)
T ss_dssp -----SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE--------EEEEEEEE
T ss_pred -----CCCceEEEECchhhcccCHHHHHHHHHHHcCCC--------eEEEEEEe
Confidence 2459999986322 12456777666 7765 77766554
No 137
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=1.1e-10 Score=109.95 Aligned_cols=94 Identities=22% Similarity=0.188 Sum_probs=75.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++.|+ +|+|+|+|+ +++.|++|++.|+ +.++++++++|+.++...
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~---------- 128 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNK--LEDTITLIKGKIEEVHLP---------- 128 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCS----------
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcC--CCCcEEEEEeeHHHhcCC----------
Confidence 45788999999999999999999886 999999997 9999999999999 866899999998864211
Q ss_pred ccCCCCCCCCcccEEEECC-hhh------hHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNL-PAT------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np-P~~------a~~~l~~~~~-l~~~ 274 (324)
...||+|++++ +.. ...++..+.. |+++
T Consensus 129 --------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 164 (340)
T 2fyt_A 129 --------VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG 164 (340)
T ss_dssp --------CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE
T ss_pred --------CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCC
Confidence 14599999987 321 2346666655 7775
No 138
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.13 E-value=4.8e-11 Score=108.35 Aligned_cols=83 Identities=17% Similarity=0.121 Sum_probs=66.0
Q ss_pred cCC--CEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCC--CC----CCCeEEEeccHHHHHHHHHHH
Q psy16898 161 REG--DLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNER--QV----KTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 161 ~~g--~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~--~l----~~~v~~~~~D~~~~~~~~~~~ 232 (324)
.+| .+|||+|||+|..++.+|++|++|+++|+++.+++.+++|++..+. .+ .++++++++|+.+++...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~--- 161 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI--- 161 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC---
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC---
Confidence 567 8999999999999999999999999999999988888877653210 01 136999999999876542
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+|++|||+.
T Consensus 162 --------------~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 162 --------------TPRPQVVYLDPMFP 175 (258)
T ss_dssp --------------SSCCSEEEECCCCC
T ss_pred --------------cccCCEEEEcCCCC
Confidence 12499999999874
No 139
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.13 E-value=4.2e-10 Score=101.02 Aligned_cols=105 Identities=24% Similarity=0.148 Sum_probs=81.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..++ ++ ++.++.+|+.++...
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~-~v~~~~~d~~~l~~~----------- 100 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNG--HQ-QVEYVQGDAEQMPFT----------- 100 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEECCC-CCCSC-----------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcC--CC-ceEEEEecHHhCCCC-----------
Confidence 4578899999999999999999988899999999999999999999888 76 799999998764211
Q ss_pred cCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|+++..- ....++..+.. |+++ |.+.+..+...
T Consensus 101 -------~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg--------G~l~~~~~~~~ 144 (260)
T 1vl5_A 101 -------DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG--------GQLLLVDNSAP 144 (260)
T ss_dssp -------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEEEEBC
T ss_pred -------CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC--------CEEEEEEcCCC
Confidence 1359999987321 12356666665 7775 77776554443
No 140
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.13 E-value=1.8e-10 Score=107.87 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=80.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-C--CEEEEEeCCHHHHHHHHHHHHH-------hCCCCC---CCeEEEeccHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-G--AIVAANDLNPDSYAWLQASIRL-------NERQVK---TPISATQKDARDFL 226 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g--~~V~avD~~~~a~~~a~~N~~~-------n~~~l~---~~v~~~~~D~~~~~ 226 (324)
+.+|.+|||+|||+|.+++.+++. | .+|+|+|+++.+++.|++|+.. |+ +. ++++++.+|+.+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~--~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH--VEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTC--SSCCCCCEEEEESCTTCCC
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccc--ccccCCceEEEECChHHcc
Confidence 568999999999999999999986 4 6999999999999999999984 44 42 47999999998753
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 227 QTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
.... ...||.|++|+|.. ..+++.+.. |+++ |.+.++.....
T Consensus 181 ~~~~----------------~~~fD~V~~~~~~~-~~~l~~~~~~Lkpg--------G~lv~~~~~~~ 223 (336)
T 2b25_A 181 EDIK----------------SLTFDAVALDMLNP-HVTLPVFYPHLKHG--------GVCAVYVVNIT 223 (336)
T ss_dssp -----------------------EEEEEECSSST-TTTHHHHGGGEEEE--------EEEEEEESSHH
T ss_pred cccC----------------CCCeeEEEECCCCH-HHHHHHHHHhcCCC--------cEEEEEeCCHH
Confidence 2211 12499999998863 335665555 7765 88887776443
No 141
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.12 E-value=1.2e-10 Score=109.97 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=76.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++.|+ +|+|+|+| .+++.|+++++.|+ +.++++++++|+.++...
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~---------- 130 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANK--LDHVVTIIKGKVEEVELP---------- 130 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS----------
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcC--CCCcEEEEECcHHHccCC----------
Confidence 45889999999999999999999877 99999999 59999999999999 887799999999875211
Q ss_pred ccCCCCCCCCcccEEEECChh-------hhHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA-------TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~-------~a~~~l~~~~~-l~~~ 274 (324)
...||+|+++++. ....++..+.. |+++
T Consensus 131 --------~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~Lkpg 166 (349)
T 3q7e_A 131 --------VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD 166 (349)
T ss_dssp --------SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE
T ss_pred --------CCceEEEEEccccccccCchhHHHHHHHHHHhCCCC
Confidence 2459999998642 12356666655 7776
No 142
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.12 E-value=1.1e-10 Score=100.95 Aligned_cols=106 Identities=16% Similarity=0.063 Sum_probs=80.4
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
+...+.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.+++++.. .. +++++++|+.++...
T Consensus 36 l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~----~~-~i~~~~~d~~~~~~~------ 104 (215)
T 2pxx_A 36 LEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH----VP-QLRWETMDVRKLDFP------ 104 (215)
T ss_dssp HGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT----CT-TCEEEECCTTSCCSC------
T ss_pred HHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc----CC-CcEEEEcchhcCCCC------
Confidence 334567889999999999999999999887 999999999999999998763 22 689999998764110
Q ss_pred hhhcccCCCCCCCCcccEEEECChhh-------------------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPAT-------------------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~-------------------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++++-. ...++..+.. |+++ |.+.+..+..
T Consensus 105 ------------~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~li~~~~~~ 162 (215)
T 2pxx_A 105 ------------SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG--------GRFISMTSAA 162 (215)
T ss_dssp ------------SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE--------EEEEEEESCC
T ss_pred ------------CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC--------CEEEEEeCCC
Confidence 23599999987652 1345555544 6654 8888877765
No 143
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.12 E-value=1.7e-10 Score=106.97 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=73.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.+++.++++ +++|+|+|+|+.|++.|++|++.++ ++++++++|+.++.......
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~~l~~~----- 94 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADFLLKTL----- 94 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHHHHHHT-----
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHHHHHhc-----
Confidence 457889999999999999999986 4799999999999999999998876 37999999988764322110
Q ss_pred cccCCCCCCCCcccEEEECChhhhHHHHHHHhc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV 270 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~ 270 (324)
....||.|++|||.+...+-+.-++
T Consensus 95 --------g~~~~D~Vl~D~gvSs~qld~~~rg 119 (301)
T 1m6y_A 95 --------GIEKVDGILMDLGVSTYQLKGENRG 119 (301)
T ss_dssp --------TCSCEEEEEEECSCCHHHHHTSCSC
T ss_pred --------CCCCCCEEEEcCccchhhhcccccc
Confidence 0134999999999876554433333
No 144
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.12 E-value=1.8e-11 Score=112.04 Aligned_cols=103 Identities=19% Similarity=0.233 Sum_probs=76.0
Q ss_pred CCeEEEEeccceeecCcChHHHHHHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCC
Q psy16898 132 NGCTFKMDFSKVYWNSRLSTEHERVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNER 209 (324)
Q Consensus 132 ~g~~f~id~~~~f~~~r~~~e~~~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~ 209 (324)
.|++.+-.+++-|+...... .++++. +.++ +|||+|||+|.++..+++++++|+|+|+++.+++.+++++. +
T Consensus 17 ~~~~~~k~~GQnfL~d~~i~--~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~--~- 90 (271)
T 3fut_A 17 HGLFADKRFGQNFLVSEAHL--RRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS--G- 90 (271)
T ss_dssp TTCCCSTTSSCCEECCHHHH--HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT--T-
T ss_pred cCCCccccCCccccCCHHHH--HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--C-
Confidence 44444444555454333122 234443 5678 99999999999999999999999999999999999998875 2
Q ss_pred CCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 210 QVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 210 ~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
++++++++|+.++.... ...+|.||.|||+.
T Consensus 91 ---~~v~vi~~D~l~~~~~~-----------------~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 91 ---LPVRLVFQDALLYPWEE-----------------VPQGSLLVANLPYH 121 (271)
T ss_dssp ---SSEEEEESCGGGSCGGG-----------------SCTTEEEEEEECSS
T ss_pred ---CCEEEEECChhhCChhh-----------------ccCccEEEecCccc
Confidence 26999999998763221 01389999999995
No 145
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.12 E-value=4.2e-10 Score=100.02 Aligned_cols=111 Identities=14% Similarity=0.004 Sum_probs=81.9
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
++..+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++. .. +++++++|+.+.......+.
T Consensus 50 ~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~-----~~-~~~~~~~d~~~~~~~~~~~~-- 121 (245)
T 3ggd_A 50 FELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT-----AA-NISYRLLDGLVPEQAAQIHS-- 121 (245)
T ss_dssp HTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC-----CT-TEEEEECCTTCHHHHHHHHH--
T ss_pred HhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc-----cc-CceEEECccccccccccccc--
Confidence 33446788899999999999999999988899999999999999998772 22 69999999988654322110
Q ss_pred hhcccCCCCCCCCcccEEEEC------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMN------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~n------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++ ++.....++..+.. |+++ |.+.+..+...
T Consensus 122 -----------~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~~~~ 167 (245)
T 3ggd_A 122 -----------EIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQ--------GAMYLIELGTG 167 (245)
T ss_dssp -----------HHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTT--------CEEEEEEECTT
T ss_pred -----------ccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCC--------CEEEEEeCCcc
Confidence 0138999886 22234567777666 6664 88777776554
No 146
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.12 E-value=1.5e-10 Score=109.01 Aligned_cols=128 Identities=19% Similarity=0.131 Sum_probs=91.5
Q ss_pred CCeEEEEeccceeecCcChHHHHHHHhhc--cCCCEEEEEcCCCchhHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 132 NGCTFKMDFSKVYWNSRLSTEHERVTKEV--REGDLVLDVFAGVGPFSIPAARRG--AIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 132 ~g~~f~id~~~~f~~~r~~~e~~~~~~~~--~~g~~VLDl~~G~G~~al~~a~~g--~~V~avD~~~~a~~~a~~N~~~n 207 (324)
.+..+...+.- |...++......+++.+ .++.+|||+|||+|.+++.+++.+ .+|+++|+|+.+++.+++|+..|
T Consensus 165 ~~~~~~~~~gv-f~~~~~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~ 243 (343)
T 2pjd_A 165 DGLTVKTLPGV-FSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN 243 (343)
T ss_dssp TTEEEEECTTC-TTSSSCCHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT
T ss_pred cceEEEecCCc-cCCCCCcHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh
Confidence 55555555443 33334443344555554 356799999999999999999865 59999999999999999999999
Q ss_pred CCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh---------hHHHHHHHhc-cchhhcC
Q psy16898 208 ERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT---------AVEYVRYLKV-LTREEFG 277 (324)
Q Consensus 208 ~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~---------a~~~l~~~~~-l~~~~~~ 277 (324)
+ +. ++++.+|+.++. ...||.|++|||.. ...++..+.. |+++
T Consensus 244 ~--~~--~~~~~~d~~~~~--------------------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkpg--- 296 (343)
T 2pjd_A 244 G--VE--GEVFASNVFSEV--------------------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSG--- 296 (343)
T ss_dssp T--CC--CEEEECSTTTTC--------------------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEE---
T ss_pred C--CC--CEEEEccccccc--------------------cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCC---
Confidence 8 75 678899987532 13599999999863 1345555555 6654
Q ss_pred CCCCCCEEEEEEccc
Q psy16898 278 KLSRPPVLYLYCFLP 292 (324)
Q Consensus 278 ~~~~~g~vh~y~f~~ 292 (324)
|.+.+.....
T Consensus 297 -----G~l~i~~~~~ 306 (343)
T 2pjd_A 297 -----GELRIVANAF 306 (343)
T ss_dssp -----EEEEEEEETT
T ss_pred -----cEEEEEEcCC
Confidence 7777665443
No 147
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.12 E-value=1.3e-10 Score=111.06 Aligned_cols=93 Identities=22% Similarity=0.173 Sum_probs=76.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++.|+ +|+|+|+| .+++.|+++++.|+ +.++++++++|+.++...
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~---------- 127 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANN--LDHIVEVIEGSVEDISLP---------- 127 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTT--CTTTEEEEESCGGGCCCS----------
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcC--CCCeEEEEECchhhcCcC----------
Confidence 35789999999999999999999988 99999999 99999999999999 887899999999875321
Q ss_pred ccCCCCCCCCcccEEEECC-hhh------hHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNL-PAT------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np-P~~------a~~~l~~~~~-l~~~ 274 (324)
..||+|++++ +.. ...++..+.. |+++
T Consensus 128 ---------~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkpg 162 (376)
T 3r0q_C 128 ---------EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPT 162 (376)
T ss_dssp ---------SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEE
T ss_pred ---------CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCC
Confidence 3599999987 222 2346666655 7776
No 148
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.11 E-value=3.3e-10 Score=98.76 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=82.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG---AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g---~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++..++ ++ +++++++|+.++...
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~~~~~~~d~~~~~~~-------- 103 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG--LK-NVEVLKSEENKIPLP-------- 103 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT--CT-TEEEEECBTTBCSSC--------
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CC-cEEEEecccccCCCC--------
Confidence 4678899999999999999999875 699999999999999999999998 87 799999998764211
Q ss_pred hcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++..- ....++..+.. |+++ |.+.+..+...
T Consensus 104 ----------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~~~~ 147 (219)
T 3dh0_A 104 ----------DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPF--------AYLAIIDWKKE 147 (219)
T ss_dssp ----------SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEE--------EEEEEEEECSS
T ss_pred ----------CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCC--------eEEEEEEeccc
Confidence 2459999986332 13456666665 7765 77777666543
No 149
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.10 E-value=4e-10 Score=97.41 Aligned_cols=106 Identities=14% Similarity=0.051 Sum_probs=77.4
Q ss_pred HhhccCCCEEEEEcCCCchhHH-HHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSI-PAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al-~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+....++.+|||+|||+|.+++ .+++.|++|+|+|+|+.+++.+++++..++ . +++++++|+.++...
T Consensus 18 ~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~~------- 86 (209)
T 2p8j_A 18 CNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--F--KLNISKGDIRKLPFK------- 86 (209)
T ss_dssp HHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--C--CCCEEECCTTSCCSC-------
T ss_pred HhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--C--ceEEEECchhhCCCC-------
Confidence 3456678999999999999854 445678899999999999999999998877 3 588999998763211
Q ss_pred hhcccCCCCCCCCcccEEEECCh------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLP------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++-. .....++..+.. |+++ |.+.+..+..
T Consensus 87 -----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~ 131 (209)
T 2p8j_A 87 -----------DESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPG--------GLACINFLTT 131 (209)
T ss_dssp -----------TTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEEET
T ss_pred -----------CCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCC--------cEEEEEEecc
Confidence 135999998622 223456666655 7765 6666555543
No 150
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.10 E-value=2e-10 Score=106.21 Aligned_cols=108 Identities=9% Similarity=0.079 Sum_probs=79.4
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCC-C-CCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQ-V-KTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~-l-~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++|+...+.. + ..+++++.+|+.+++...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------- 154 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT------- 154 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-------
Confidence 46789999999999999999986 359999999999999999998764200 1 237999999999876531
Q ss_pred hcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|+|.. ..+|++.+.. |+++ |++.+.+-++.
T Consensus 155 ----------~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lkpg--------G~lv~~~~s~~ 202 (294)
T 3adn_A 155 ----------SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG--------GIFVAQNGVCF 202 (294)
T ss_dssp ----------CCCEEEEEECC----------CCHHHHHHHHHTEEEE--------EEEEEEEEECS
T ss_pred ----------CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCC--------CEEEEecCCcc
Confidence 24599999998752 1457766665 7765 88887765543
No 151
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.10 E-value=1.3e-10 Score=114.40 Aligned_cols=77 Identities=21% Similarity=0.198 Sum_probs=67.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.+++.+++.++ +|+|+|+|+ +++.|++|++.|+ +.++++++++|+.++..
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~g--l~~~v~~~~~d~~~~~~------------ 221 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSL------------ 221 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCC------------
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcC--CCCcEEEEECchhhCcc------------
Confidence 4688999999999999999999765 999999999 9999999999999 87789999999876311
Q ss_pred cCCCCCCCCcccEEEECChh
Q psy16898 240 SEGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~ 259 (324)
...||+|++++|.
T Consensus 222 -------~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 222 -------PEQVDIIISEPMG 234 (480)
T ss_dssp -------SSCEEEEECCCCH
T ss_pred -------CCCeEEEEEeCch
Confidence 1359999999883
No 152
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.10 E-value=1.4e-10 Score=107.17 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=83.2
Q ss_pred hhccCCCEEEEEcCCCchhHHHHH--h-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 158 KEVREGDLVLDVFAGVGPFSIPAA--R-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 158 ~~~~~g~~VLDl~~G~G~~al~~a--~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
..+.++.+|||+|||+|.+++.+| . .+++|+|+|+|+.+++.|++|+..++ +.++++++++|+.++...
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~------ 185 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKLDTR------ 185 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGCCCC------
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcCCcc------
Confidence 346789999999999999999985 2 36699999999999999999999888 876799999999874211
Q ss_pred hhhcccCCCCCCCCcccEEEECChhh-------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPAT-------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~-------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
..||.|+++.+.. ...++..+.. |+++ |.+.+.++..
T Consensus 186 -------------~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~~~ 230 (305)
T 3ocj_A 186 -------------EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPG--------GALVTSFLTP 230 (305)
T ss_dssp -------------SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEE--------EEEEEECCCC
T ss_pred -------------CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCC--------eEEEEEecCC
Confidence 3599999976331 2246777766 7775 7877766554
No 153
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.10 E-value=2.4e-10 Score=100.57 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=79.0
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhCCCC----CCCeEEEeccHHHHHH
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRG-------AIVAANDLNPDSYAWLQASIRLNERQV----KTPISATQKDARDFLQ 227 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g-------~~V~avD~~~~a~~~a~~N~~~n~~~l----~~~v~~~~~D~~~~~~ 227 (324)
.+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++|+..++ + ..+++++++|+.+...
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK--PELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC--GGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC--ccccccCCEEEEECChHhccc
Confidence 35688999999999999999999864 399999999999999999999886 5 3479999999987431
Q ss_pred HHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 228 TDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
..... ...||.|+++.+.. .+++.+.. |+++ |.+.+.+-
T Consensus 155 ~~~~~--------------~~~fD~I~~~~~~~--~~~~~~~~~Lkpg--------G~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKE--------------LGLFDAIHVGASAS--ELPEILVDLLAEN--------GKLIIPIE 194 (227)
T ss_dssp HHHHH--------------HCCEEEEEECSBBS--SCCHHHHHHEEEE--------EEEEEEEE
T ss_pred ccCcc--------------CCCcCEEEECCchH--HHHHHHHHhcCCC--------cEEEEEEc
Confidence 11010 13499999997753 23444444 6665 66665543
No 154
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=3.6e-10 Score=100.84 Aligned_cols=91 Identities=21% Similarity=0.168 Sum_probs=72.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.+++.+++.|.+|+|+|+|+.+++.|++|+..++ + +++++++|+.++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~--~v~~~~~d~~~~~~------------- 102 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERN--L--KIEFLQGDVLEIAF------------- 102 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CCEEEESCGGGCCC-------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcC--C--ceEEEECChhhccc-------------
Confidence 367899999999999999999999999999999999999999999887 5 59999999886421
Q ss_pred CCCCCCCCcccEEEECC---hh----hhHHHHHHHhc-cchh
Q psy16898 241 EGNSTGGTAVARVIMNL---PA----TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~np---P~----~a~~~l~~~~~-l~~~ 274 (324)
...||.|++.. +. ....++..+.. |+++
T Consensus 103 ------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 138 (252)
T 1wzn_A 103 ------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG 138 (252)
T ss_dssp ------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred ------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCC
Confidence 13499999742 22 23456666655 7765
No 155
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.09 E-value=1.4e-10 Score=101.12 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=76.4
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++..++ +++++++|+.++..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~d~~~~~~------------- 111 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS-----HISWAATDILQFST------------- 111 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCS-----SEEEEECCTTTCCC-------------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCC-----CeEEEEcchhhCCC-------------
Confidence 466799999999999999999998899999999999999999886543 79999999876531
Q ss_pred CCCCCCCCcccEEEECC-------hhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 241 EGNSTGGTAVARVIMNL-------PATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~np-------P~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++. |.....++..+.. |+++ |.+.+.+.
T Consensus 112 ------~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~ 155 (216)
T 3ofk_A 112 ------AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPG--------GHLVFGSA 155 (216)
T ss_dssp ------SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEE--------EEEEEEEE
T ss_pred ------CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCC--------CEEEEEec
Confidence 24599999972 2222356666655 7765 77776543
No 156
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.09 E-value=6.5e-10 Score=103.58 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=82.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH-hCCCC-CCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL-NERQV-KTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~-n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++.. |+..+ ..+++++.+|+.+++...
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------ 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc------
Confidence 346789999999999999999986 45999999999999999999864 22001 247999999999876541
Q ss_pred hhcccCCCCCCCCcccEEEECChhh-----------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT-----------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~-----------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||+|++|++.. ..+|++.+.. |+++ |++.+.+.+.
T Consensus 149 -----------~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~~~~ 198 (314)
T 1uir_A 149 -----------EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG--------GVMGMQTGMI 198 (314)
T ss_dssp -----------CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE--------EEEEEEEEEE
T ss_pred -----------CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCC--------cEEEEEccCc
Confidence 24599999998652 2567777766 7765 7777765444
No 157
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.09 E-value=5.7e-10 Score=98.57 Aligned_cols=96 Identities=18% Similarity=0.141 Sum_probs=75.6
Q ss_pred HHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 155 RVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 155 ~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.+.+.+.++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|++++..++ . +++++++|+.++..
T Consensus 26 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~------- 93 (243)
T 3d2l_A 26 WVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN--R--HVDFWVQDMRELEL------- 93 (243)
T ss_dssp HHHHHSCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT--C--CCEEEECCGGGCCC-------
T ss_pred HHHHHcCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC--C--ceEEEEcChhhcCC-------
Confidence 45566778899999999999999999988 899999999999999999998776 3 58999999876421
Q ss_pred hhhcccCCCCCCCCcccEEEECC--------hhhhHHHHHHHhc-cchh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNL--------PATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~np--------P~~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++. +.....++..+.. |+++
T Consensus 94 ------------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 130 (243)
T 3d2l_A 94 ------------PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDG 130 (243)
T ss_dssp ------------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEE
T ss_pred ------------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 13599999864 1223456666655 7765
No 158
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.09 E-value=5.3e-10 Score=102.37 Aligned_cols=98 Identities=24% Similarity=0.222 Sum_probs=67.0
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeC-CHHHHHHHHHHHH-----HhCCCCC----CCeEEEeccHHHHHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDL-NPDSYAWLQASIR-----LNERQVK----TPISATQKDARDFLQTD 229 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~-~~~a~~~a~~N~~-----~n~~~l~----~~v~~~~~D~~~~~~~~ 229 (324)
.++.+|||+|||+|.+++.+++.|+ +|+|+|+ |+.+++.|++|+. .++ +. +++++...|..+.....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCS--SETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC------------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc--cccCCCCCeEEEEecCCCccHHH
Confidence 4788999999999999999999887 9999999 8999999999994 444 43 36888865543321111
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEE-CChhh---hHHHHHHHhc-cc
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIM-NLPAT---AVEYVRYLKV-LT 272 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~-npP~~---a~~~l~~~~~-l~ 272 (324)
... +. ...||.|++ |++.. ...+++.+.. |+
T Consensus 156 ~~~-~~-----------~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 156 QRC-TG-----------LQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp HHH-HS-----------CSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred Hhh-cc-----------CCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 100 00 135999987 76543 3456666655 55
No 159
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.08 E-value=6e-10 Score=102.00 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=82.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.|++++...+ +.++++++++|+.++...
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~---------- 147 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSFLEIPCE---------- 147 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCTTSCSSC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCcccCCCC----------
Confidence 367889999999999999999986 8899999999999999999999988 877899999998764211
Q ss_pred ccCCCCCCCCcccEEEECC-----hhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIMNL-----PATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np-----P~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++.- |. ...++..+.. |+++ |.+.+..+..
T Consensus 148 --------~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~Lkpg--------G~l~~~~~~~ 190 (297)
T 2o57_A 148 --------DNSYDFIWSQDAFLHSPD-KLKVFQECARVLKPR--------GVMAITDPMK 190 (297)
T ss_dssp --------TTCEEEEEEESCGGGCSC-HHHHHHHHHHHEEEE--------EEEEEEEEEE
T ss_pred --------CCCEeEEEecchhhhcCC-HHHHHHHHHHHcCCC--------eEEEEEEecc
Confidence 13599999852 22 3456777666 7775 7777665543
No 160
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.08 E-value=2.9e-10 Score=100.32 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=80.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ +++++++|+.++...
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~d~~~~~~~---------- 107 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-----KVKYIEADYSKYDFE---------- 107 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-----TEEEEESCTTTCCCC----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-----CEEEEeCchhccCCC----------
Confidence 47789999999999999999996 7799999999999999999876443 799999998764321
Q ss_pred ccCCCCCCCCcccEEEECChh-----h-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCCh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA-----T-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDL 296 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~-----~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~ 296 (324)
..||.|+++..- . ...++..+.. |+++ |.+.+..+......
T Consensus 108 ---------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~~~~~ 155 (234)
T 3dtn_A 108 ---------EKYDMVVSALSIHHLEDEDKKELYKRSYSILKES--------GIFINADLVHGETA 155 (234)
T ss_dssp ---------SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEECBCSSH
T ss_pred ---------CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCC--------cEEEEEEecCCCCh
Confidence 359999997422 1 2246666666 7775 88888777665443
No 161
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.08 E-value=4.2e-10 Score=103.38 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=79.9
Q ss_pred cCCCEEEEEcCCCchhHHHHHh---cCCEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAAR---RGAIVAANDLNPDSYAWLQASIRLN-ERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~---~g~~V~avD~~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
.++.+|||+|||+|.++..+++ .+++|+|+|+|+.+++.|+++++.+ + ...+++++++|+.++......
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~----- 107 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD--TYKNVSFKISSSDDFKFLGAD----- 107 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTT-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC--CCCceEEEEcCHHhCCccccc-----
Confidence 4788999999999999999994 5679999999999999999999987 3 345899999999864321100
Q ss_pred hcccCCCCCCCCcccEEEECChh---hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA---TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~---~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
......||+|+++..- ....++..+.. |+++ |.+.+.++..
T Consensus 108 -------~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~~~ 152 (299)
T 3g5t_A 108 -------SVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKD--------GTIAIWGYAD 152 (299)
T ss_dssp -------TTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEE--------EEEEEEEEEE
T ss_pred -------cccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCC--------cEEEEEecCC
Confidence 0001459999997432 12346666655 7765 7777655543
No 162
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.08 E-value=2.3e-10 Score=107.14 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=76.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.+++.+++.|+ +|+|+|+| .+++.|+++++.|+ +.++++++++|+.++...
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~---------- 102 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNG--FSDKITLLRGKLEDVHLP---------- 102 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTT--CTTTEEEEESCTTTSCCS----------
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcC--CCCCEEEEECchhhccCC----------
Confidence 45789999999999999999999887 99999999 69999999999999 877899999998764211
Q ss_pred ccCCCCCCCCcccEEEECChhh-------hHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT-------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~-------a~~~l~~~~~-l~~~ 274 (324)
...||+|+++++.. ...++.++.. |+++
T Consensus 103 --------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 138 (328)
T 1g6q_1 103 --------FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG 138 (328)
T ss_dssp --------SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE
T ss_pred --------CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCC
Confidence 13599999997632 2346666655 7765
No 163
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.08 E-value=4.1e-10 Score=101.63 Aligned_cols=105 Identities=20% Similarity=0.171 Sum_probs=82.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++ .+++|+|+|+|+.+++.+++++..++ +.++++++.+|+.+....
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~---------- 126 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAG--LANRVTFSYADAMDLPFE---------- 126 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCSC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECccccCCCC----------
Confidence 35788999999999999999998 47899999999999999999999988 877899999998763211
Q ss_pred ccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++...- ....++..+.. |+++ |.+.+..+..
T Consensus 127 --------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~i~~~~~ 169 (273)
T 3bus_A 127 --------DASFDAVWALESLHHMPDRGRALREMARVLRPG--------GTVAIADFVL 169 (273)
T ss_dssp --------TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE--------EEEEEEEEEE
T ss_pred --------CCCccEEEEechhhhCCCHHHHHHHHHHHcCCC--------eEEEEEEeec
Confidence 1359999975321 12456666666 7765 7777666554
No 164
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.08 E-value=2.6e-10 Score=107.67 Aligned_cols=92 Identities=21% Similarity=0.163 Sum_probs=73.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.+++.+++.|+ +|+|+|+|+ +++.|+++++.|+ +.++++++++|+.++..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~~------------ 113 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSL------------ 113 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCC------------
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcC--CCCcEEEEEcchhhCCC------------
Confidence 4788999999999999999999876 999999996 8899999999999 87789999999876411
Q ss_pred cCCCCCCCCcccEEEECChhh------hHHHHHHHhc-cchh
Q psy16898 240 SEGNSTGGTAVARVIMNLPAT------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~------a~~~l~~~~~-l~~~ 274 (324)
...||+|+++++.. ....+..+.. |+++
T Consensus 114 -------~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkpg 148 (348)
T 2y1w_A 114 -------PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPS 148 (348)
T ss_dssp -------SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEE
T ss_pred -------CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCC
Confidence 13599999997632 2344444444 6665
No 165
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.07 E-value=1.7e-10 Score=103.28 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=78.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.+++++..+ .+++++++|+.+....
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~---------- 117 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKEFP---------- 117 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCCCC----------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCCCC----------
Confidence 457889999999999999999997 889999999999999998876532 3799999998764211
Q ss_pred ccCCCCCCCCcccEEEECC------hhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCC
Q psy16898 239 QSEGNSTGGTAVARVIMNL------PATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np------P~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
...||.|+++. +.....++..+.. |+++ |.+.+..+....
T Consensus 118 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~~~ 164 (266)
T 3ujc_A 118 --------ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT--------GTLLITDYCATE 164 (266)
T ss_dssp --------TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEEEESC
T ss_pred --------CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC--------CEEEEEEeccCC
Confidence 24599999972 2334456666666 7765 777766655443
No 166
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=3.4e-10 Score=100.43 Aligned_cols=104 Identities=12% Similarity=-0.046 Sum_probs=76.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++.++ . +++++++|+.++.....
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~--~v~~~~~d~~~~~~~~~-------- 125 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--H--KVIPLKGLWEDVAPTLP-------- 125 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--S--EEEEEESCHHHHGGGSC--------
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--C--CeEEEecCHHHhhcccC--------
Confidence 45788999999999999999988665 99999999999999999988766 3 69999999988643211
Q ss_pred ccCCCCCCCCcccEEEEC-----ChhhhH----HHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 239 QSEGNSTGGTAVARVIMN-----LPATAV----EYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~n-----pP~~a~----~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|++| .+.... .++..+.. |+++ |++.+..+.
T Consensus 126 --------~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg--------G~l~~~~~~ 172 (236)
T 1zx0_A 126 --------DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG--------GVLTYCNLT 172 (236)
T ss_dssp --------TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE--------EEEEECCHH
T ss_pred --------CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCC--------eEEEEEecC
Confidence 1359999992 222111 23444544 6765 777765544
No 167
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.07 E-value=3.3e-10 Score=99.61 Aligned_cols=103 Identities=19% Similarity=0.086 Sum_probs=78.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-C--CEEEEEeCCHHHHHHHHHHHHHhCCCC----CCCeEEEeccHHHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-G--AIVAANDLNPDSYAWLQASIRLNERQV----KTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g--~~V~avD~~~~a~~~a~~N~~~n~~~l----~~~v~~~~~D~~~~~~~~~~~ 232 (324)
+.++.+|||+|||+|.++..+++. | .+|+++|+++.+++.+++|+..++ + .++++++++|+......
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~~---- 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD--PTLLSSGRVQLVVGDGRMGYAE---- 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC--THHHHTSSEEEEESCGGGCCGG----
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc--ccccCCCcEEEEECCcccCccc----
Confidence 568899999999999999999985 3 599999999999999999999876 5 34799999998753221
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++.|.. .+++.+.. |+++ |.+.+.....
T Consensus 149 --------------~~~fD~i~~~~~~~--~~~~~~~~~Lkpg--------G~lv~~~~~~ 185 (226)
T 1i1n_A 149 --------------EAPYDAIHVGAAAP--VVPQALIDQLKPG--------GRLILPVGPA 185 (226)
T ss_dssp --------------GCCEEEEEECSBBS--SCCHHHHHTEEEE--------EEEEEEESCT
T ss_pred --------------CCCcCEEEECCchH--HHHHHHHHhcCCC--------cEEEEEEecC
Confidence 13499999998752 23344444 6664 7776655443
No 168
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.07 E-value=2.1e-10 Score=99.40 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=77.8
Q ss_pred CEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCC
Q psy16898 164 DLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEG 242 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 242 (324)
.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ +.++++++++|+.++...
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~-------------- 108 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHNIPIE-------------- 108 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTBCSSC--------------
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHHCCCC--------------
Confidence 39999999999999999996 6699999999999999999999998 877899999998763211
Q ss_pred CCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 243 NSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 243 ~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||+|+++..- ....++..+.. |+++ |.+.+..
T Consensus 109 ----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~~~~ 148 (219)
T 3dlc_A 109 ----DNYADLIVSRGSVFFWEDVATAFREIYRILKSG--------GKTYIGG 148 (219)
T ss_dssp ----TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred ----cccccEEEECchHhhccCHHHHHHHHHHhCCCC--------CEEEEEe
Confidence 2459999997532 13456666666 7765 7766543
No 169
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=5e-10 Score=104.40 Aligned_cols=102 Identities=12% Similarity=0.056 Sum_probs=81.3
Q ss_pred EEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCC
Q psy16898 165 LVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEG 242 (324)
Q Consensus 165 ~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 242 (324)
+|||+|||+|.++..+++ .+.+|++||+++.+++.|++++..+. - .+++++.+|+++++....
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~-~rv~v~~~Da~~~l~~~~------------ 156 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR--A-PRVKIRVDDARMVAESFT------------ 156 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC--T-TTEEEEESCHHHHHHTCC------------
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC--C-CceEEEECcHHHHHhhcc------------
Confidence 999999999999999998 46799999999999999999986543 2 389999999999875421
Q ss_pred CCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 243 NSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 243 ~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|.+.. ..+|+..+.. |+++ |++.+.+.+..
T Consensus 157 ----~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~Lkpg--------Gvlv~~~~~~~ 204 (317)
T 3gjy_A 157 ----PASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPG--------GLYVANCGDHS 204 (317)
T ss_dssp ----TTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEE--------EEEEEEEEECT
T ss_pred ----CCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCC--------cEEEEEecCCc
Confidence 13599999986431 2578888877 8876 88877776544
No 170
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.07 E-value=1.1e-09 Score=101.59 Aligned_cols=108 Identities=11% Similarity=0.051 Sum_probs=79.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRL-NERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++.. +......+++++.+|+.+++....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~------- 166 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTP------- 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSC-------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhcc-------
Confidence 56789999999999999999986 45999999999999999998742 110012479999999998765310
Q ss_pred cccCCCCCCCCcccEEEECChhhh--------HHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATA--------VEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a--------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||+|++|+|... .+++..+.. |+++ |++.+.+-++
T Consensus 167 ---------~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~~~~ 213 (304)
T 3bwc_A 167 ---------DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD--------GICCNQGESI 213 (304)
T ss_dssp ---------TTCEEEEEEECC---------CCHHHHHHHHHHEEEE--------EEEEEEECCT
T ss_pred ---------CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC--------cEEEEecCCc
Confidence 135999999986521 467777666 7765 7777665443
No 171
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=2.8e-10 Score=101.51 Aligned_cols=101 Identities=12% Similarity=-0.052 Sum_probs=77.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..+|.+|||+|||+|..+..+++.+ ++|++||+||.+++.|++++...+ . ++.++.+|+.+......
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~--~~~~~~~~a~~~~~~~~-------- 125 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--H--KVIPLKGLWEDVAPTLP-------- 125 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--S--EEEEEESCHHHHGGGSC--------
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--C--ceEEEeehHHhhccccc--------
Confidence 3578999999999999999999864 599999999999999999998776 4 58999999988765421
Q ss_pred ccCCCCCCCCcccEEEECChhh---------hHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT---------AVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~---------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|+.|+... ...++..+.. ||++ |.+.++
T Consensus 126 --------~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG--------G~l~f~ 169 (236)
T 3orh_A 126 --------DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG--------GVLTYC 169 (236)
T ss_dssp --------TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE--------EEEEEC
T ss_pred --------ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCC--------CEEEEE
Confidence 24599999986432 1234554444 7775 776544
No 172
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.07 E-value=2.9e-10 Score=103.35 Aligned_cols=48 Identities=21% Similarity=0.114 Sum_probs=44.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n 207 (324)
+.++.+|||+|||+|.+++.++++|++|+|+|+|+.|++.|++|+..+
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc
Confidence 457899999999999999999999999999999999999999988654
No 173
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.06 E-value=5.3e-10 Score=97.02 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=76.6
Q ss_pred hhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 158 KEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 158 ~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.+++ ++ .. +++++++|+.++ ..
T Consensus 42 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~--~~-~~~~~~~d~~~~-~~--------- 104 (218)
T 3ou2_A 42 RAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HG--LD-NVEFRQQDLFDW-TP--------- 104 (218)
T ss_dssp TTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GC--CT-TEEEEECCTTSC-CC---------
T ss_pred hcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cC--CC-CeEEEecccccC-CC---------
Confidence 345678899999999999999999998999999999999999987 55 54 799999998765 11
Q ss_pred cccCCCCCCCCcccEEEECC-----hhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMNL-----PAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~np-----P~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++- |.. ...++..+.. |+++ |.+.+..+.+
T Consensus 105 ---------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~ 149 (218)
T 3ou2_A 105 ---------DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPG--------GVVEFVDVTD 149 (218)
T ss_dssp ---------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEECC
T ss_pred ---------CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCC--------eEEEEEeCCC
Confidence 24599999863 221 2456666665 7765 6666555443
No 174
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.06 E-value=4.2e-10 Score=97.39 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=75.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHH-HHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTD-ARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~-~~~~~~~~~ 238 (324)
+.+|.+|||+|||+|.++..+++++++|+|+|+++. .. ++ +++++++|+.+..... ..+.+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~-----------~~--~~-~v~~~~~D~~~~~~~~~~~~~~~~~- 87 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM-----------EE--IA-GVRFIRCDIFKETIFDDIDRALREE- 87 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC-----------CC--CT-TCEEEECCTTSSSHHHHHHHHHHHH-
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc-----------cc--CC-CeEEEEccccCHHHHHHHHHHhhcc-
Confidence 568999999999999999999999889999999984 13 44 6999999987632111 11000000
Q ss_pred ccCCCCCCCCcccEEEECChhhh-----H----------HHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHHhHh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA-----V----------EYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETKKKI 302 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a-----~----------~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~~~v 302 (324)
....||+|++|+|... . ..+..+.. |+ +||.+.+..|...........+
T Consensus 88 -------~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk--------pGG~lv~k~~~~~~~~~~~~~l 152 (191)
T 3dou_A 88 -------GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLR--------NGGNVLLKQFQGDMTNDFIAIW 152 (191)
T ss_dssp -------TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE--------EEEEEEEEEECSTHHHHHHHHH
T ss_pred -------cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc--------CCCEEEEEEcCCCCHHHHHHHH
Confidence 0024999999975311 1 12222222 44 4599999888776655555555
Q ss_pred hh
Q psy16898 303 KS 304 (324)
Q Consensus 303 ~~ 304 (324)
+.
T Consensus 153 ~~ 154 (191)
T 3dou_A 153 RK 154 (191)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 175
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.06 E-value=5.1e-10 Score=96.52 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
.+.+|||+|||+|.++..+++.|++|+|+|+|+.+++.++++ . . +++++++|+.++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~----~---~-~~~~~~~d~~~~~~~------------- 99 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT----H---P-SVTFHHGTITDLSDS------------- 99 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH----C---T-TSEEECCCGGGGGGS-------------
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh----C---C-CCeEEeCcccccccC-------------
Confidence 378999999999999999999999999999999999999876 2 1 588999999874311
Q ss_pred CCCCCCCcccEEEECC-----h-hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 242 GNSTGGTAVARVIMNL-----P-ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~np-----P-~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++. | .....++..+.. |+++ |.+.+..+...
T Consensus 100 -----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--------G~l~i~~~~~~ 145 (203)
T 3h2b_A 100 -----PKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDG--------GGLLMSFFSGP 145 (203)
T ss_dssp -----CCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEE--------EEEEEEEECCS
T ss_pred -----CCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCC--------cEEEEEEccCC
Confidence 24599999952 2 234567777766 7765 77776665543
No 176
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.06 E-value=8e-10 Score=103.09 Aligned_cols=105 Identities=12% Similarity=0.067 Sum_probs=79.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHh--CCCC-CCCeEEEeccHHHHHHHHHHHhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLN--ERQV-KTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n--~~~l-~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++|+... + + ..+++++.+|+.+++...
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~--~~~~rv~~~~~D~~~~l~~~----- 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCG--FSHPKLDLFCGDGFEFLKNH----- 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGG--GGCTTEEEECSCHHHHHHHC-----
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccc--cCCCCEEEEEChHHHHHHhc-----
Confidence 346789999999999999999985 469999999999999999998653 3 4 348999999999876541
Q ss_pred hhhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||+|++|++.. ..++++.+.. |+++ |++.+..-+
T Consensus 179 ------------~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg--------G~lv~~~~~ 224 (314)
T 2b2c_A 179 ------------KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED--------GILSSQGES 224 (314)
T ss_dssp ------------TTCEEEEEECCC-------------HHHHHHHHEEEE--------EEEEEECCC
T ss_pred ------------CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC--------eEEEEECCC
Confidence 23599999998541 1456666665 7765 887776533
No 177
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.06 E-value=1.3e-10 Score=104.53 Aligned_cols=83 Identities=16% Similarity=0.274 Sum_probs=66.2
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
++++. +.++.+|||+|||+|.++..+++++++|+|+|+++.+++.+++|+.. . ++++++++|+.++....
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~----~-~~v~~~~~D~~~~~~~~--- 92 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD----H-DNFQVLNKDILQFKFPK--- 92 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT----C-CSEEEECCCGGGCCCCS---
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc----C-CCeEEEEChHHhCCccc---
Confidence 35544 34788999999999999999999999999999999999999998863 2 27999999998642110
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...| .|++|||+.
T Consensus 93 --------------~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 93 --------------NQSY-KIFGNIPYN 105 (244)
T ss_dssp --------------SCCC-EEEEECCGG
T ss_pred --------------CCCe-EEEEeCCcc
Confidence 0124 799999995
No 178
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.05 E-value=7.4e-10 Score=100.87 Aligned_cols=105 Identities=15% Similarity=0.049 Sum_probs=80.3
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
.+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..++ +..+++++++|+.+....
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~--------- 129 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMD--------- 129 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCC---------
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccC---------
Confidence 357889999999999999999998776 99999999999999999999887 755799999998764210
Q ss_pred cccCCCCCCCCcccEEEECCh--------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLP--------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP--------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
....||.|+++.. .....++..+.. |+++ |.+.+...
T Consensus 130 --------~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~ 175 (298)
T 1ri5_A 130 --------LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG--------GYFIMTVP 175 (298)
T ss_dssp --------CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE--------EEEEEEEE
T ss_pred --------CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCC--------CEEEEEEC
Confidence 0245999998632 223456666655 6665 66665543
No 179
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.05 E-value=1.2e-10 Score=109.58 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCCchhHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRG-------AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g-------~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
++.+|||+|||+|.+++.+++.. ..|+|+|+++.+++.|+.|+..++ + ++.++++|+.....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g--~--~~~i~~~D~l~~~~------- 198 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR--Q--KMTLLHQDGLANLL------- 198 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT--C--CCEEEESCTTSCCC-------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC--C--CceEEECCCCCccc-------
Confidence 56799999999999999998743 689999999999999999999998 7 48999999865210
Q ss_pred hhhcccCCCCCCCCcccEEEECChh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~ 259 (324)
...||.|++|||.
T Consensus 199 ------------~~~fD~Ii~NPPf 211 (344)
T 2f8l_A 199 ------------VDPVDVVISDLPV 211 (344)
T ss_dssp ------------CCCEEEEEEECCC
T ss_pred ------------cCCccEEEECCCC
Confidence 2459999999993
No 180
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.05 E-value=1.6e-10 Score=118.76 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=82.1
Q ss_pred EeCCeEEEEeccce------e---ecCcChHHHHH--HHhh--ccCCCEEEEEcCCCchhHHHHHhcC------------
Q psy16898 130 KENGCTFKMDFSKV------Y---WNSRLSTEHER--VTKE--VREGDLVLDVFAGVGPFSIPAARRG------------ 184 (324)
Q Consensus 130 ~e~g~~f~id~~~~------f---~~~r~~~e~~~--~~~~--~~~g~~VLDl~~G~G~~al~~a~~g------------ 184 (324)
..+.+.+.+|.+.- | .......|... ++.. ..++..|||+|||+|+|++.+|..+
T Consensus 145 ~~~~~~l~ld~sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f 224 (703)
T 3v97_A 145 HKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 224 (703)
T ss_dssp ETTEEEEEEESSSSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCC
T ss_pred ECCEEEEEEecCCCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCcccc
Confidence 34667778886641 1 11111223331 2222 4578899999999999999998742
Q ss_pred --------------------------------CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 185 --------------------------------AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 185 --------------------------------~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
..|+|+|+++.|++.|++|+..++ +.+.+++.++|+.++.....
T Consensus 225 ~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~ag--v~~~i~~~~~D~~~~~~~~~-- 300 (703)
T 3v97_A 225 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAG--IGELITFEVKDVAQLTNPLP-- 300 (703)
T ss_dssp TTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEECCGGGCCCSCT--
T ss_pred chhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCccccc--
Confidence 479999999999999999999999 98779999999987421100
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+||+|||+.
T Consensus 301 --------------~~~~d~Iv~NPPYG 314 (703)
T 3v97_A 301 --------------KGPYGTVLSNPPYG 314 (703)
T ss_dssp --------------TCCCCEEEECCCCC
T ss_pred --------------cCCCCEEEeCCCcc
Confidence 11599999999985
No 181
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.05 E-value=1.1e-09 Score=103.10 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=80.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHh--CCCC-CCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLN--ERQV-KTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n--~~~l-~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++|+... + + ..+++++.+|+.+++....
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~g--l~~~rv~~~~~D~~~~l~~~~----- 191 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIG--YEDPRVNLVIGDGVAFLKNAA----- 191 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--GGSTTEEEEESCHHHHHHTSC-----
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccc--cCCCcEEEEECCHHHHHHhcc-----
Confidence 46789999999999999999986 469999999999999999998753 4 4 2479999999998765321
Q ss_pred hhcccCCCCCCCCcccEEEECChhh--------hHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPAT--------AVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~--------a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||+|++|++.. ..+++..+.. |+++ |++.+..
T Consensus 192 -----------~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg--------G~lv~~~ 235 (334)
T 1xj5_A 192 -----------EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG--------GVVCTQA 235 (334)
T ss_dssp -----------TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE--------EEEEEEC
T ss_pred -----------CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC--------cEEEEec
Confidence 13599999998621 2467777766 7765 7777753
No 182
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.04 E-value=2.6e-10 Score=104.64 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=73.0
Q ss_pred CeEEEEeccceeecCcChHHHHHHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCE----EEEEeCCHHHHHHHHHHHHH
Q psy16898 133 GCTFKMDFSKVYWNSRLSTEHERVTKE--VREGDLVLDVFAGVGPFSIPAARRGAI----VAANDLNPDSYAWLQASIRL 206 (324)
Q Consensus 133 g~~f~id~~~~f~~~r~~~e~~~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~----V~avD~~~~a~~~a~~N~~~ 206 (324)
|++.+-.+++-|+.+.... .++++. +.++.+|||+|||+|.++..+++++.. |+|+|+++.+++.+++|.
T Consensus 13 ~~~~~k~~GQ~fL~d~~i~--~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-- 88 (279)
T 3uzu_A 13 GHFARKRFGQNFLVDHGVI--DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-- 88 (279)
T ss_dssp -----CCCSCCEECCHHHH--HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--
T ss_pred CCCccccCCccccCCHHHH--HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--
Confidence 4555555666555333222 234443 457899999999999999999998776 999999999999999994
Q ss_pred hCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 207 NERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 207 n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
.. +++++++|+.++......+ + .....+.||.|||+.
T Consensus 89 ~~-----~v~~i~~D~~~~~~~~~~~--------~----~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 89 GE-----LLELHAGDALTFDFGSIAR--------P----GDEPSLRIIGNLPYN 125 (279)
T ss_dssp GG-----GEEEEESCGGGCCGGGGSC--------S----SSSCCEEEEEECCHH
T ss_pred CC-----CcEEEECChhcCChhHhcc--------c----ccCCceEEEEccCcc
Confidence 32 6999999998764321100 0 001246899999995
No 183
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.04 E-value=2.6e-10 Score=104.22 Aligned_cols=101 Identities=11% Similarity=0.012 Sum_probs=78.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.|++++..++ . +++++.+|+.++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~--~v~~~~~d~~~~~~--------- 86 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--Y--DSEFLEGDATEIEL--------- 86 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--S--EEEEEESCTTTCCC---------
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--C--ceEEEEcchhhcCc---------
Confidence 457889999999999999999985 6799999999999999999998766 4 69999999886422
Q ss_pred hcccCCCCCCCCcccEEEECChhh----hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT----AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~----a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|+++..-. ...++..+.. |+++ |++.+....
T Consensus 87 ----------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~ 128 (284)
T 3gu3_A 87 ----------NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG--------GKIICFEPH 128 (284)
T ss_dssp ----------SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE--------EEEEEEECC
T ss_pred ----------CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCC--------CEEEEEecc
Confidence 13599999964321 2356666655 7765 777765544
No 184
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.04 E-value=7.3e-11 Score=104.80 Aligned_cols=100 Identities=8% Similarity=-0.012 Sum_probs=74.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCC-HHHHHHH---HHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLN-PDSYAWL---QASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~-~~a~~~a---~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
..++.+|||+|||+|.+++.+|+ .++.|+|+|+| +.+++.| ++++..++ +. ++.++++|+.++....
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~--~~-~v~~~~~d~~~l~~~~---- 94 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG--LS-NVVFVIAAAESLPFEL---- 94 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC--CS-SEEEECCBTTBCCGGG----
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC--CC-CeEEEEcCHHHhhhhc----
Confidence 45788999999999999999995 46699999999 5555555 88888888 76 7999999998763211
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhhh---------HHHHHHHhc-cchhhcCCCCCCCEEEE
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPATA---------VEYVRYLKV-LTREEFGKLSRPPVLYL 287 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~a---------~~~l~~~~~-l~~~~~~~~~~~g~vh~ 287 (324)
...+|.|.+++|... ..++..+.. |+++ |.+.+
T Consensus 95 -------------~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpG--------G~l~i 137 (225)
T 3p2e_A 95 -------------KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKE--------AHFEF 137 (225)
T ss_dssp -------------TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEE--------EEEEE
T ss_pred -------------cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCC--------cEEEE
Confidence 123888999987432 234555555 6665 77776
No 185
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.04 E-value=7.3e-10 Score=97.83 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=72.9
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++..++ + +++++++|+.++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~--~--~~~~~~~d~~~~~~-------------- 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG--L--KPRLACQDISNLNI-------------- 98 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT--C--CCEEECCCGGGCCC--------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcC--C--CeEEEecccccCCc--------------
Confidence 67899999999999999999999999999999999999999998877 5 58999999876421
Q ss_pred CCCCCCCcccEEEECC-h-------hhhHHHHHHHhc-cchh
Q psy16898 242 GNSTGGTAVARVIMNL-P-------ATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~np-P-------~~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++. . .....++..+.. |+++
T Consensus 99 -----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 135 (246)
T 1y8c_A 99 -----NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp -----SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE
T ss_pred -----cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCC
Confidence 13499999976 1 223456666665 6665
No 186
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.04 E-value=8.8e-10 Score=95.69 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=75.5
Q ss_pred HHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 155 RVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 155 ~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.++..+.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.+++++ + +.+.++|+.++. .
T Consensus 36 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~------~~~~~~d~~~~~-~------ 99 (211)
T 3e23_A 36 KFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---G------RPVRTMLFHQLD-A------ 99 (211)
T ss_dssp HHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T------SCCEECCGGGCC-C------
T ss_pred HHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc---C------CceEEeeeccCC-C------
Confidence 45666778999999999999999999999999999999999999999887 3 345677876543 1
Q ss_pred hhhcccCCCCCCCCcccEEEECCh------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLP------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++.. .....++..+.. |+++ |.+.+...
T Consensus 100 ------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~ 142 (211)
T 3e23_A 100 ------------IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPG--------GLFYASYK 142 (211)
T ss_dssp ------------CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEE
T ss_pred ------------CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCC--------cEEEEEEc
Confidence 246999999742 123456666666 7765 66655443
No 187
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.03 E-value=1.4e-09 Score=105.57 Aligned_cols=62 Identities=19% Similarity=0.329 Sum_probs=54.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CC-EEEEEeCCHHHHHHH-------HHHHHHhCCCCC-CCeEEEeccHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GA-IVAANDLNPDSYAWL-------QASIRLNERQVK-TPISATQKDAR 223 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~-~V~avD~~~~a~~~a-------~~N~~~n~~~l~-~~v~~~~~D~~ 223 (324)
+.++.+|||+|||+|.+++.+|+. ++ +|+|+|+++.+++.| ++|++.++ +. ++++++++|..
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSF 311 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCS
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCcc
Confidence 458899999999999999999984 54 899999999999999 99999888 74 68999998654
No 188
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.02 E-value=2.1e-09 Score=98.01 Aligned_cols=105 Identities=15% Similarity=0.065 Sum_probs=78.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC---CCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVK---TPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~---~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.|++|+...+ .. .++.+..+|+.++......
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~------ 127 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRR--KEPAFDKWVIEEANWLTLDKDVPA------ 127 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--TSHHHHTCEEEECCGGGHHHHSCC------
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcc--cccccceeeEeecChhhCcccccc------
Confidence 467899999999999999999999999999999999999999986543 22 2688999999886532200
Q ss_pred cccCCCCCCCCcccEEEECC------hh------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 238 SQSEGNSTGGTAVARVIMNL------PA------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~np------P~------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|++.. |. ....++..+.. |+++ |++.+...
T Consensus 128 ---------~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~ 176 (293)
T 3thr_A 128 ---------GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG--------GLLVIDHR 176 (293)
T ss_dssp ---------TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEE--------EEEEEEEE
T ss_pred ---------CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCC--------eEEEEEeC
Confidence 24599999851 11 13456666655 7765 77665543
No 189
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.02 E-value=7.8e-10 Score=97.77 Aligned_cols=106 Identities=15% Similarity=0.076 Sum_probs=79.9
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+...+.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.++++. . . .+++++++|+.++...
T Consensus 47 l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~--~-~~~~~~~~d~~~~~~~------- 113 (242)
T 3l8d_A 47 FEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---E--G-PDLSFIKGDLSSLPFE------- 113 (242)
T ss_dssp HHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---C--B-TTEEEEECBTTBCSSC-------
T ss_pred HHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---c--c-CCceEEEcchhcCCCC-------
Confidence 4445778999999999999999999999999999999999999998874 2 2 3699999998764211
Q ss_pred hhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++.-.- ....++..+.. |+++ |.+.+..+...
T Consensus 114 -----------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~i~~~~~~ 157 (242)
T 3l8d_A 114 -----------NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSD--------GYACIAILGPT 157 (242)
T ss_dssp -----------TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEE--------EEEEEEEECTT
T ss_pred -----------CCCccEEEEcChHhhccCHHHHHHHHHHHhCCC--------eEEEEEEcCCc
Confidence 2459999985211 13456666666 7765 77777765554
No 190
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.02 E-value=1.5e-09 Score=92.16 Aligned_cols=100 Identities=13% Similarity=0.032 Sum_probs=75.0
Q ss_pred hhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 158 KEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 158 ~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++. ++.++++|+.+....
T Consensus 42 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~--------~~~~~~~d~~~~~~~--------- 104 (195)
T 3cgg_A 42 AMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP--------EARWVVGDLSVDQIS--------- 104 (195)
T ss_dssp HHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTSCCC---------
T ss_pred HhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC--------CCcEEEcccccCCCC---------
Confidence 346788999999999999999999998999999999999999987642 478899998763210
Q ss_pred cccCCCCCCCCcccEEEECChh-------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPA-------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~-------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|+++++. ....++..+.. ++++ |.+.+....
T Consensus 105 ---------~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--------G~l~~~~~~ 149 (195)
T 3cgg_A 105 ---------ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGAD--------GRAVIGFGA 149 (195)
T ss_dssp ---------CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEET
T ss_pred ---------CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCC--------CEEEEEeCC
Confidence 2359999998542 12456666665 6665 666654433
No 191
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.01 E-value=5.5e-10 Score=101.24 Aligned_cols=103 Identities=15% Similarity=-0.014 Sum_probs=74.9
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+.+....+.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++ .+ +++++++|+.++...
T Consensus 33 l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~--------~~-~v~~~~~~~e~~~~~------- 96 (257)
T 4hg2_A 33 LGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR--------HP-RVTYAVAPAEDTGLP------- 96 (257)
T ss_dssp HHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC--------CT-TEEEEECCTTCCCCC-------
T ss_pred HHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh--------cC-Cceeehhhhhhhccc-------
Confidence 33445567899999999999999999999999999999999987642 22 699999998764221
Q ss_pred hhcccCCCCCCCCcccEEEECChh---hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPA---TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~---~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|++.--- ....++..+.. |+++ |.+.+.++...
T Consensus 97 -----------~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpg--------G~l~~~~~~~~ 139 (257)
T 4hg2_A 97 -----------PASVDVAIAAQAMHWFDLDRFWAELRRVARPG--------AVFAAVTYGLT 139 (257)
T ss_dssp -----------SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEE--------EEEEEEEECCC
T ss_pred -----------CCcccEEEEeeehhHhhHHHHHHHHHHHcCCC--------CEEEEEECCCC
Confidence 2469999985211 01235555555 7776 88877766554
No 192
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.01 E-value=1.9e-09 Score=98.93 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=82.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCC-CCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQV-KTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++..++..+ ..+++++.+|+.+++...
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-------- 148 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-------- 148 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--------
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC--------
Confidence 46789999999999999999985 3599999999999999999986431002 247999999999876542
Q ss_pred cccCCCCCCCCcccEEEECChhh-----h---HHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT-----A---VEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~-----a---~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++|++.. . .++++.+.. |+++ |++.+.+.+..
T Consensus 149 ---------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg--------G~lv~~~~~~~ 196 (283)
T 2i7c_A 149 ---------TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN--------GYCVAQCESLW 196 (283)
T ss_dssp ---------CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE--------EEEEEECCCTT
T ss_pred ---------CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC--------cEEEEECCCcc
Confidence 14599999987531 1 477777766 7775 88877755443
No 193
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.00 E-value=1.1e-09 Score=99.09 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=79.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++..++ ++ +++++.+|+.++...
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~~~~~~~d~~~~~~~--------- 102 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG--IK-NVKFLQANIFSLPFE--------- 102 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEECCGGGCCSC---------
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CC-CcEEEEcccccCCCC---------
Confidence 468899999999999999999986 6799999999999999999999998 76 799999999864321
Q ss_pred cccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||.|+++..- ....++..+.. |+++ |++.+.
T Consensus 103 ---------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~~~ 141 (276)
T 3mgg_A 103 ---------DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPG--------GTITVI 141 (276)
T ss_dssp ---------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred ---------CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCC--------cEEEEE
Confidence 2459999986321 12356777766 7775 766654
No 194
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.00 E-value=8.7e-10 Score=110.76 Aligned_cols=79 Identities=16% Similarity=0.085 Sum_probs=67.5
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.+.++.+|||+|||.|.++..+|+.|+.|+|||.++.+++.|+..+..++ .- ++++.++++.++.....
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~--~~-~~~~~~~~~~~~~~~~~-------- 131 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENP--DF-AAEFRVGRIEEVIAALE-------- 131 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTST--TS-EEEEEECCHHHHHHHCC--------
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcC--CC-ceEEEECCHHHHhhhcc--------
Confidence 35577899999999999999999999999999999999999999998876 44 69999999998865421
Q ss_pred ccCCCCCCCCcccEEEEC
Q psy16898 239 QSEGNSTGGTAVARVIMN 256 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~n 256 (324)
..+||+|++-
T Consensus 132 --------~~~fD~v~~~ 141 (569)
T 4azs_A 132 --------EGEFDLAIGL 141 (569)
T ss_dssp --------TTSCSEEEEE
T ss_pred --------CCCccEEEEC
Confidence 2359999873
No 195
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.99 E-value=7.7e-10 Score=98.29 Aligned_cols=100 Identities=14% Similarity=0.064 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++..++ .. ++.++++|+.++...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~-~~~~~~~d~~~~~~~------------ 143 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG--KR-VRNYFCCGLQDFTPE------------ 143 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG--GG-EEEEEECCGGGCCCC------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC--Cc-eEEEEEcChhhcCCC------------
Confidence 588999999999999999998755 99999999999999999988764 33 689999998764221
Q ss_pred CCCCCCCCcccEEEECC-----hhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 241 EGNSTGGTAVARVIMNL-----PAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~np-----P~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++- |.. ...++..+.. |+++ |.+.+..+
T Consensus 144 ------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~~ 186 (241)
T 2ex4_A 144 ------PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN--------GIIVIKDN 186 (241)
T ss_dssp ------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEE
T ss_pred ------CCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC--------eEEEEEEc
Confidence 13599999972 221 2356666655 7765 77666544
No 196
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.99 E-value=5.7e-10 Score=97.33 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=73.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.+++++. . +++++++|+.++...
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--~-----~~~~~~~d~~~~~~~------------ 104 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP--K-----EFSITEGDFLSFEVP------------ 104 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC--T-----TCCEESCCSSSCCCC------------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC--C-----ceEEEeCChhhcCCC------------
Confidence 478899999999999999999999999999999999999988765 2 578899998764221
Q ss_pred CCCCCCCCcccEEEECCh-----hh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 241 EGNSTGGTAVARVIMNLP-----AT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP-----~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
..||.|+++.. .. ...++..+.. |++ ||.+.+.....
T Consensus 105 -------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp--------gG~l~i~~~~~ 148 (220)
T 3hnr_A 105 -------TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNK--------GGKIVFADTIF 148 (220)
T ss_dssp -------SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT--------TCEEEEEEECB
T ss_pred -------CCeEEEEECcchhcCChHHHHHHHHHHHHhcCC--------CCEEEEEeccc
Confidence 35999999732 21 1235666555 665 48877765443
No 197
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=8.8e-10 Score=96.00 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=76.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG---AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g---~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++..++ +. ++++.++|+......
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~-------- 143 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG--YD-NVIVIVGDGTLGYEP-------- 143 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT--CT-TEEEEESCGGGCCGG--------
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--CC-CeEEEECCcccCCCC--------
Confidence 4678899999999999999999864 799999999999999999999888 76 699999998543221
Q ss_pred hcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++.+... +.+.+.. |+++ |.+.+.+-
T Consensus 144 ----------~~~fD~v~~~~~~~~--~~~~~~~~L~pg--------G~lv~~~~ 178 (215)
T 2yxe_A 144 ----------LAPYDRIYTTAAGPK--IPEPLIRQLKDG--------GKLLMPVG 178 (215)
T ss_dssp ----------GCCEEEEEESSBBSS--CCHHHHHTEEEE--------EEEEEEES
T ss_pred ----------CCCeeEEEECCchHH--HHHHHHHHcCCC--------cEEEEEEC
Confidence 134999999865421 2233333 6654 77666543
No 198
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.99 E-value=6.2e-10 Score=102.38 Aligned_cols=48 Identities=21% Similarity=0.207 Sum_probs=40.9
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhC
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNE 208 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~ 208 (324)
.++.+|||+|||+|.+++.+++. +++|+|+|+++.+++.|++|+..++
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhh
Confidence 36889999999999999999996 5699999999999999999977543
No 199
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.99 E-value=4e-10 Score=109.91 Aligned_cols=79 Identities=20% Similarity=0.206 Sum_probs=65.5
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc---------------CCEEEEEeCCHHHHHHHHHHHHHhCCCCCC-CeEEEeccHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR---------------GAIVAANDLNPDSYAWLQASIRLNERQVKT-PISATQKDARD 224 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~---------------g~~V~avD~~~~a~~~a~~N~~~n~~~l~~-~v~~~~~D~~~ 224 (324)
.++.+|||+|||+|.|.+.+++. +..++|+|+++.+++.|+.|+..++ +.. ++.+.++|+..
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g--~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG--IGTDRSPIVCEDSLE 247 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT--CCSSCCSEEECCTTT
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC--CCcCCCCEeeCCCCC
Confidence 46789999999999999998863 3589999999999999999999998 742 57889999765
Q ss_pred HHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 225 FLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
... ...||+|++|||..
T Consensus 248 ~~~-------------------~~~fD~Iv~NPPf~ 264 (445)
T 2okc_A 248 KEP-------------------STLVDVILANPPFG 264 (445)
T ss_dssp SCC-------------------SSCEEEEEECCCSS
T ss_pred Ccc-------------------cCCcCEEEECCCCC
Confidence 311 12599999999985
No 200
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.98 E-value=1.4e-09 Score=97.11 Aligned_cols=103 Identities=20% Similarity=0.180 Sum_probs=77.1
Q ss_pred HHHhhcc--CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHH
Q psy16898 155 RVTKEVR--EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDAR 231 (324)
Q Consensus 155 ~~~~~~~--~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~ 231 (324)
.+.+.+. ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++. . .+++++++|+.++...
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~----~~~~~~~~d~~~~~~~--- 105 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--S----PVVCYEQKAIEDIAIE--- 105 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--C----TTEEEEECCGGGCCCC---
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--c----CCeEEEEcchhhCCCC---
Confidence 3444444 788999999999999999999888 99999999999999998776 2 2689999998764211
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|+++..- ....++..+.. |+++ |.+.+..
T Consensus 106 ---------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~ 145 (253)
T 3g5l_A 106 ---------------PDAYNVVLSSLALHYIASFDDICKKVYINLKSS--------GSFIFSV 145 (253)
T ss_dssp ---------------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred ---------------CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC--------cEEEEEe
Confidence 2459999986422 13456666666 7775 6666543
No 201
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.97 E-value=1.1e-09 Score=97.80 Aligned_cols=99 Identities=19% Similarity=0.123 Sum_probs=75.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.+++++ ... . .+++++.+|+.++...
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~--~-~~~~~~~~d~~~~~~~----------- 101 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV--D-RKVQVVQADARAIPLP----------- 101 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS--C-TTEEEEESCTTSCCSC-----------
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc--C-CceEEEEcccccCCCC-----------
Confidence 467889999999999999999999899999999999999999998 333 3 3799999998754211
Q ss_pred cCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEE
Q psy16898 240 SEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLY 288 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y 288 (324)
...||+|+++..- ....++..+.. |+++ |.+.+.
T Consensus 102 -------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~~~ 140 (263)
T 2yqz_A 102 -------DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPG--------GALLEG 140 (263)
T ss_dssp -------TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred -------CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCC--------cEEEEE
Confidence 2359999986431 12456666655 7765 666554
No 202
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.96 E-value=7.4e-10 Score=97.56 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=74.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++|+..++ +++++++|+.+.+..
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~v~~~~~d~~~~~~~----------- 131 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-----NIKLILGDGTLGYEE----------- 131 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-----SEEEEESCGGGCCGG-----------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-----CeEEEECCccccccc-----------
Confidence 4578899999999999999999988999999999999999999987554 699999998762221
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|+++.+... +.+.+.. |+++ |.+.+.+-
T Consensus 132 -------~~~fD~v~~~~~~~~--~~~~~~~~L~pg--------G~l~~~~~ 166 (231)
T 1vbf_A 132 -------EKPYDRVVVWATAPT--LLCKPYEQLKEG--------GIMILPIG 166 (231)
T ss_dssp -------GCCEEEEEESSBBSS--CCHHHHHTEEEE--------EEEEEEEC
T ss_pred -------CCCccEEEECCcHHH--HHHHHHHHcCCC--------cEEEEEEc
Confidence 134999999865421 2223333 6654 66665543
No 203
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.96 E-value=1.3e-09 Score=96.22 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=75.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++.. +++++++|+.+...
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-------~v~~~~~d~~~~~~------------ 100 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-------GITYIHSRFEDAQL------------ 100 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-------CEEEEESCGGGCCC------------
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-------CeEEEEccHHHcCc------------
Confidence 44778999999999999999999888999999999999999876531 58899999887511
Q ss_pred cCCCCCCCCcccEEEEC-----ChhhhHHHHHHHh-c-cchhhcCCCCCCCEEEEEEccc
Q psy16898 240 SEGNSTGGTAVARVIMN-----LPATAVEYVRYLK-V-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~n-----pP~~a~~~l~~~~-~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++. .|. ...++..+. . |+++ |.+.+.+...
T Consensus 101 -------~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~~Lkpg--------G~l~i~~~~~ 144 (250)
T 2p7i_A 101 -------PRRYDNIVLTHVLEHIDD-PVALLKRINDDWLAEG--------GRLFLVCPNA 144 (250)
T ss_dssp -------SSCEEEEEEESCGGGCSS-HHHHHHHHHHTTEEEE--------EEEEEEEECT
T ss_pred -------CCcccEEEEhhHHHhhcC-HHHHHHHHHHHhcCCC--------CEEEEEcCCh
Confidence 2459999984 222 245677776 6 7765 7777665443
No 204
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=6.1e-10 Score=98.82 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=76.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++|+..++ +. ++++..+|+..-+..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~~~~~---------- 155 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAG--VK-NVHVILGDGSKGFPP---------- 155 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTT--CC-SEEEEESCGGGCCGG----------
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcC--CC-CcEEEECCcccCCCC----------
Confidence 5678899999999999999999976 799999999999999999999988 86 699999998321111
Q ss_pred ccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|+++.+... +.+.+.. |+++ |.+.+.+-.
T Consensus 156 --------~~~fD~Ii~~~~~~~--~~~~~~~~L~pg--------G~lvi~~~~ 191 (235)
T 1jg1_A 156 --------KAPYDVIIVTAGAPK--IPEPLIEQLKIG--------GKLIIPVGS 191 (235)
T ss_dssp --------GCCEEEEEECSBBSS--CCHHHHHTEEEE--------EEEEEEECS
T ss_pred --------CCCccEEEECCcHHH--HHHHHHHhcCCC--------cEEEEEEec
Confidence 123999999865421 2223333 6654 777665543
No 205
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.96 E-value=2.4e-09 Score=95.00 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=73.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.++++ +.++++|+.+++....
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~--------- 98 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLP--------- 98 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSC---------
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcC---------
Confidence 56789999999999999999999999999999999999987643 5788899988753211
Q ss_pred cCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++ .|. ....++..+.. |+++ |.+.+......
T Consensus 99 -------~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~~ 144 (240)
T 3dli_A 99 -------DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYS--------SYIVIESPNPT 144 (240)
T ss_dssp -------TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTT--------CCEEEEEECTT
T ss_pred -------CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCC--------cEEEEEeCCcc
Confidence 2459999985 221 12456666655 6664 77776665543
No 206
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.95 E-value=2.2e-09 Score=93.37 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=73.9
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.++++ . ++.+..+|+.++.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~-----~~~~~~~~~~~~~~~~~---------- 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA----G-----AGEVHLASYAQLAEAKV---------- 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT----C-----SSCEEECCHHHHHTTCS----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh----c-----ccccchhhHHhhccccc----------
Confidence 3678999999999999999999999999999999999999876 3 35688899887532210
Q ss_pred CCCCCCCCcccEEEECChh---hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 241 EGNSTGGTAVARVIMNLPA---TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~---~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
.....||.|+++..- ....++..+.. |+++ |.+.+..+.+
T Consensus 112 ----~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~ 155 (227)
T 3e8s_A 112 ----PVGKDYDLICANFALLHQDIIELLSAMRTLLVPG--------GALVIQTLHP 155 (227)
T ss_dssp ----CCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEE--------EEEEEEECCT
T ss_pred ----ccCCCccEEEECchhhhhhHHHHHHHHHHHhCCC--------eEEEEEecCc
Confidence 012359999987432 23456777766 7765 6666655433
No 207
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.95 E-value=1.5e-09 Score=97.59 Aligned_cols=89 Identities=19% Similarity=0.154 Sum_probs=69.0
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++. +++++++|+.++..
T Consensus 47 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~~~~----------- 107 (263)
T 3pfg_A 47 HSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP--------DAVLHHGDMRDFSL----------- 107 (263)
T ss_dssp HCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTCCC-----------
T ss_pred hCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC--------CCEEEECChHHCCc-----------
Confidence 34577899999999999999999999999999999999999987642 47899999876422
Q ss_pred ccCCCCCCCCcccEEEECC------h--hhhHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNL------P--ATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np------P--~~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++. | .....++..+.. |+++
T Consensus 108 --------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 108 --------GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPD 144 (263)
T ss_dssp --------SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEE
T ss_pred --------cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 13599999974 1 123346666655 7765
No 208
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.94 E-value=3e-09 Score=95.98 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=79.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-C--CEEEEEeCCHH------HHHHHHHHHHHhCCCCCCCeEEEecc-HHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-G--AIVAANDLNPD------SYAWLQASIRLNERQVKTPISATQKD-ARDFLQTD 229 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g--~~V~avD~~~~------a~~~a~~N~~~n~~~l~~~v~~~~~D-~~~~~~~~ 229 (324)
+.++.+|||+|||+|.++..+++. | ++|+|+|+|+. +++.|++++..++ +.++++++.+| ........
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECChhhhccCCC
Confidence 468899999999999999999986 4 79999999997 9999999999888 76689999998 22110000
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEECChhh----hHHHHHHHhccchhhcCCCCCCCEEEEEEcccC
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMNLPAT----AVEYVRYLKVLTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~----a~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
....||.|+++.+-. ...+++.++.+++ ++|.+.+..+...
T Consensus 119 ----------------~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~-------~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 119 ----------------ADQHFDRVVLAHSLWYFASANALALLFKNMAA-------VCDHVDVAEWSMQ 163 (275)
T ss_dssp ----------------TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT-------TCSEEEEEEECSS
T ss_pred ----------------CCCCEEEEEEccchhhCCCHHHHHHHHHHHhC-------CCCEEEEEEecCC
Confidence 024599999864321 2235666655443 3588888776654
No 209
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.93 E-value=4.5e-10 Score=101.39 Aligned_cols=82 Identities=21% Similarity=0.348 Sum_probs=64.7
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARRG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDAR 231 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~ 231 (324)
++++. +.++++|||+|||+|.++..++++| ++|+|+|+++.+++.+++| .. . +++++++|+.++.....
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~---~-~v~~i~~D~~~~~~~~~- 93 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GD---E-RLEVINEDASKFPFCSL- 93 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CC---T-TEEEECSCTTTCCGGGS-
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cC---C-CeEEEEcchhhCChhHc-
Confidence 45554 4578899999999999999999986 6999999999999999987 22 2 69999999987532210
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
.. ...|+.|||+.
T Consensus 94 ---------------~~-~~~vv~NlPy~ 106 (249)
T 3ftd_A 94 ---------------GK-ELKVVGNLPYN 106 (249)
T ss_dssp ---------------CS-SEEEEEECCTT
T ss_pred ---------------cC-CcEEEEECchh
Confidence 01 34899999995
No 210
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.93 E-value=9e-09 Score=97.54 Aligned_cols=84 Identities=30% Similarity=0.471 Sum_probs=71.0
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhCCCCC-----CCeEEEeccHHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGA--IVAANDLNPDSYAWLQASIRLNERQVK-----TPISATQKDARDFLQTDAR 231 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~--~V~avD~~~~a~~~a~~N~~~n~~~l~-----~~v~~~~~D~~~~~~~~~~ 231 (324)
..++|++|||+|||.|+-++++|..+. .|+|+|+++.-++.+++|++..+ .. .++.+.+.|+..+....
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~--~~~~~~~~~v~v~~~D~~~~~~~~-- 220 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYV--PEEIRDGNQVRVTSWDGRKWGELE-- 220 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHS--CTTTTTSSSEEEECCCGGGHHHHS--
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhh--hhhhccCCceEEEeCchhhcchhc--
Confidence 367899999999999999999998654 89999999999999999999876 43 37899999998875431
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChhhh
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
+..||.|++|+|.++
T Consensus 221 ---------------~~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 221 ---------------GDTYDRVLVDVPCTT 235 (359)
T ss_dssp ---------------TTCEEEEEEECCCCC
T ss_pred ---------------cccCCEEEECCccCC
Confidence 245999999999764
No 211
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.93 E-value=1.5e-09 Score=108.49 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=72.1
Q ss_pred eeecCcChHHHHHHHhhc--cCCCEEEEEcCCCchhHHHHHhc--------------------CCEEEEEeCCHHHHHHH
Q psy16898 143 VYWNSRLSTEHERVTKEV--REGDLVLDVFAGVGPFSIPAARR--------------------GAIVAANDLNPDSYAWL 200 (324)
Q Consensus 143 ~f~~~r~~~e~~~~~~~~--~~g~~VLDl~~G~G~~al~~a~~--------------------g~~V~avD~~~~a~~~a 200 (324)
.|+.|+...+ .+++.+ .++.+|||++||+|.|.+.+++. ...++|+|+++.+++.|
T Consensus 150 ~fyTP~~iv~--~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 150 QYFTPRPLIK--TIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp CCCCCHHHHH--HHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred eeeCCHHHHH--HHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 3556662221 233433 46789999999999999998862 13799999999999999
Q ss_pred HHHHHHhCCCCCC----CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 201 QASIRLNERQVKT----PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 201 ~~N~~~n~~~l~~----~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+.|+.+++ +.. ++.+.++|+....... ...||+|++|||+.
T Consensus 228 ~~nl~l~g--i~~~~~~~~~I~~gDtL~~~~~~-----------------~~~fD~Vv~NPPf~ 272 (541)
T 2ar0_A 228 LMNCLLHD--IEGNLDHGGAIRLGNTLGSDGEN-----------------LPKAHIVATNPPFG 272 (541)
T ss_dssp HHHHHTTT--CCCBGGGTBSEEESCTTSHHHHT-----------------SCCEEEEEECCCCT
T ss_pred HHHHHHhC--CCccccccCCeEeCCCccccccc-----------------ccCCeEEEECCCcc
Confidence 99999988 762 2788999987543210 13599999999985
No 212
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.92 E-value=3.8e-09 Score=88.39 Aligned_cols=97 Identities=8% Similarity=0.074 Sum_probs=73.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++ .. +++++++| ..+.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~-----~v~~~~~d-~~~~------------- 72 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---FD-----SVITLSDP-KEIP------------- 72 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---CT-----TSEEESSG-GGSC-------------
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---CC-----CcEEEeCC-CCCC-------------
Confidence 56788999999999999999999877999999999999999987 22 58899999 1110
Q ss_pred cCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++..- ....++..+.. |+++ |.+.+..+...
T Consensus 73 -------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~~ 116 (170)
T 3i9f_A 73 -------DNSVDFILFANSFHDMDDKQHVISEVKRILKDD--------GRVIIIDWRKE 116 (170)
T ss_dssp -------TTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEE--------EEEEEEEECSS
T ss_pred -------CCceEEEEEccchhcccCHHHHHHHHHHhcCCC--------CEEEEEEcCcc
Confidence 2359999986322 13456666666 7765 77777766554
No 213
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.92 E-value=2.3e-09 Score=94.67 Aligned_cols=89 Identities=21% Similarity=0.166 Sum_probs=69.0
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++... .+++++++|+.+....
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~------------ 104 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLP------------ 104 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCC------------
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCC------------
Confidence 788999999999999999999988 999999999999999876542 2589999998764211
Q ss_pred CCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchh
Q psy16898 241 EGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~ 274 (324)
...||.|+++..- ....++..+.. |+++
T Consensus 105 ------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 137 (243)
T 3bkw_A 105 ------QDSFDLAYSSLALHYVEDVARLFRTVHQALSPG 137 (243)
T ss_dssp ------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred ------CCCceEEEEeccccccchHHHHHHHHHHhcCcC
Confidence 2359999986432 13456666655 7765
No 214
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.92 E-value=9.1e-10 Score=97.11 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=67.7
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.+.++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.+++| . - +++++++|+.+.+...
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~--~--~~~~~~~d~~~~~~~~--------- 107 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----A--P--HADVYEWNGKGELPAG--------- 107 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----C--T--TSEEEECCSCSSCCTT---------
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----C--C--CceEEEcchhhccCCc---------
Confidence 357889999999999999999999999999999999999999987 2 1 5899999985322110
Q ss_pred ccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~ 274 (324)
....||.|++++. ...++..+.. |+++
T Consensus 108 -------~~~~fD~v~~~~~--~~~~l~~~~~~Lkpg 135 (226)
T 3m33_A 108 -------LGAPFGLIVSRRG--PTSVILRLPELAAPD 135 (226)
T ss_dssp -------CCCCEEEEEEESC--CSGGGGGHHHHEEEE
T ss_pred -------CCCCEEEEEeCCC--HHHHHHHHHHHcCCC
Confidence 0135999999842 1234444444 6665
No 215
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.90 E-value=1.6e-09 Score=95.59 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=76.8
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc-C-------CEEEEEeCCHHHHHHHHHHHHHhCCCC----CCCeEEEeccHHHHH
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR-G-------AIVAANDLNPDSYAWLQASIRLNERQV----KTPISATQKDARDFL 226 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~-g-------~~V~avD~~~~a~~~a~~N~~~n~~~l----~~~v~~~~~D~~~~~ 226 (324)
.+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.|++|+..++ . ..+++++++|+.+..
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~ 158 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD--RSMLDSGQLLIVEGDGRKGY 158 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH--HHHHHHTSEEEEESCGGGCC
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC--ccccCCCceEEEECCcccCC
Confidence 3568899999999999999999983 3 499999999999999999998653 2 237999999987622
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 227 QTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
.. ...||.|+++.+.. .+.+.+.. |+++ |.+.+.+...
T Consensus 159 ~~------------------~~~fD~I~~~~~~~--~~~~~~~~~Lkpg--------G~lvi~~~~~ 197 (227)
T 1r18_A 159 PP------------------NAPYNAIHVGAAAP--DTPTELINQLASG--------GRLIVPVGPD 197 (227)
T ss_dssp GG------------------GCSEEEEEECSCBS--SCCHHHHHTEEEE--------EEEEEEESCS
T ss_pred Cc------------------CCCccEEEECCchH--HHHHHHHHHhcCC--------CEEEEEEecC
Confidence 11 13499999987652 12344433 6654 7777666543
No 216
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.89 E-value=1.2e-09 Score=98.81 Aligned_cols=81 Identities=21% Similarity=0.233 Sum_probs=61.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCE--EEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAI--VAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~--V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++++|||+|||+|.++. +++ +.+ |+|+|+++.+++.+++|+..+. +++++++|+.++......+ +
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~~-----~v~~i~~D~~~~~~~~~~~----~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLGP-----KLTIYQQDAMTFNFGELAE----K 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTGG-----GEEEECSCGGGCCHHHHHH----H
T ss_pred CCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccCC-----ceEEEECchhhCCHHHhhc----c
Confidence 4578899999999999999 654 567 9999999999999998775322 7999999998752221110 0
Q ss_pred cccCCCCCCCCcccEEEECChhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
....+.||.|||+.
T Consensus 88 ---------~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 88 ---------MGQPLRVFGNLPYN 101 (252)
T ss_dssp ---------HTSCEEEEEECCTT
T ss_pred ---------cCCceEEEECCCCC
Confidence 01268999999985
No 217
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.88 E-value=3.6e-09 Score=108.83 Aligned_cols=110 Identities=14% Similarity=0.165 Sum_probs=79.4
Q ss_pred eecCcChHHHHH-HHhhc--cCCCEEEEEcCCCchhHHHHHhcC---CEEEEEeCCHHHHHHHHHHHHHh------CCCC
Q psy16898 144 YWNSRLSTEHER-VTKEV--REGDLVLDVFAGVGPFSIPAARRG---AIVAANDLNPDSYAWLQASIRLN------ERQV 211 (324)
Q Consensus 144 f~~~r~~~e~~~-~~~~~--~~g~~VLDl~~G~G~~al~~a~~g---~~V~avD~~~~a~~~a~~N~~~n------~~~l 211 (324)
++++.+..++.. +++.+ .++.+|||+|||+|.+++.+++.+ ++|+|+|+|+.|++.|++++... + +
T Consensus 700 tFsPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~g--l 777 (950)
T 3htx_A 700 FFKPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACN--V 777 (950)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSS--C
T ss_pred cCCchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcC--C
Confidence 456665444443 33433 378899999999999999999987 79999999999999999977643 4 4
Q ss_pred CCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchh
Q psy16898 212 KTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 212 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~ 274 (324)
. +++++++|+.++... ...||.|++. .|. ....++..+.. |+++
T Consensus 778 ~-nVefiqGDa~dLp~~------------------d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 778 K-SATLYDGSILEFDSR------------------LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp S-EEEEEESCTTSCCTT------------------SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred C-ceEEEECchHhCCcc------------------cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 4 799999999874321 2459999985 222 23346666555 6653
No 218
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.88 E-value=2.5e-09 Score=95.13 Aligned_cols=98 Identities=9% Similarity=0.002 Sum_probs=73.4
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++..+. +++++++|+.++...
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~d~~~~~~~----------- 155 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMP-----VGKFILASMETATLP----------- 155 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSS-----EEEEEESCGGGCCCC-----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCC-----ceEEEEccHHHCCCC-----------
Confidence 3678999999999999999998754 89999999999999998876432 689999998764211
Q ss_pred cCCCCCCCCcccEEEECCh------hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 240 SEGNSTGGTAVARVIMNLP------ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP------~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
...||.|++... .....++..+.. |+++ |.+.+..
T Consensus 156 -------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--------G~l~i~~ 197 (254)
T 1xtp_A 156 -------PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN--------GYIFFKE 197 (254)
T ss_dssp -------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred -------CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC--------eEEEEEe
Confidence 235999998632 223456666655 7765 6665544
No 219
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.88 E-value=6.5e-11 Score=106.22 Aligned_cols=83 Identities=17% Similarity=0.315 Sum_probs=66.3
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
.+++. +.++.+|||+|||+|.++..+++++++|+|+|+++.+++.|++|+. . . ++++++++|+.++....
T Consensus 20 ~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~--~-~~v~~~~~D~~~~~~~~--- 91 (245)
T 1yub_A 20 QIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--L--N-TRVTLIHQDILQFQFPN--- 91 (245)
T ss_dssp HHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--T--C-SEEEECCSCCTTTTCCC---
T ss_pred HHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--c--C-CceEEEECChhhcCccc---
Confidence 34444 4578899999999999999999998999999999999999988876 2 2 37999999998643110
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...| .|++|||+.
T Consensus 92 --------------~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 92 --------------KQRY-KIVGNIPYH 104 (245)
T ss_dssp --------------SSEE-EEEEECCSS
T ss_pred --------------CCCc-EEEEeCCcc
Confidence 1348 899999985
No 220
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=5.1e-09 Score=95.08 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=74.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.++++. . ++.++.+|+.++..
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~-----~~~~~~~d~~~~~~------------ 114 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY---P-----HLHFDVADARNFRV------------ 114 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---T-----TSCEEECCTTTCCC------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC---C-----CCEEEECChhhCCc------------
Confidence 457889999999999999999998889999999999999998764 2 47788999876321
Q ss_pred cCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 240 SEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++..- ....++..+.. |+++ |++.+......
T Consensus 115 -------~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg--------G~l~~~~~~~~ 158 (279)
T 3ccf_A 115 -------DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSG--------GRFVAEFGGKG 158 (279)
T ss_dssp -------SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEEECTT
T ss_pred -------CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCC--------cEEEEEecCCc
Confidence 1359999986432 12356666655 7775 77776665543
No 221
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.87 E-value=4.5e-09 Score=87.39 Aligned_cols=112 Identities=20% Similarity=0.145 Sum_probs=76.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHH-HHHhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTD-ARAHLV 235 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~-~~~~~~ 235 (324)
+.++.+|||+|||+|.++..+++. +.+|+++|+++ +++ +. +++++++|+.+..... ....+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~------------~~-~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP------------IV-GVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC------------CT-TEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc------------cC-cEEEEEcccccchhhhhhhccCC
Confidence 568889999999999999999986 36999999999 642 22 6889999997753110 000000
Q ss_pred hhcccCCCCCCCCcccEEEECChhhh---------------HHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCChhHH
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPATA---------------VEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMDLETK 299 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~a---------------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~~~~ 299 (324)
...||.|++|+|... ..++..+.. ++++ |.+.+..+.........
T Consensus 86 -----------~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g--------G~l~~~~~~~~~~~~~~ 146 (180)
T 1ej0_A 86 -----------DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG--------GSFVVKVFQGEGFDEYL 146 (180)
T ss_dssp -----------TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEEEESSTTHHHHH
T ss_pred -----------CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC--------cEEEEEEecCCcHHHHH
Confidence 235999999987421 345555544 5654 88888877766555555
Q ss_pred hHhhh
Q psy16898 300 KKIKS 304 (324)
Q Consensus 300 ~~v~~ 304 (324)
+..+.
T Consensus 147 ~~~~~ 151 (180)
T 1ej0_A 147 REIRS 151 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 222
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.85 E-value=8e-09 Score=98.61 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=79.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHh-----CCCCCCCeEEEeccHHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLN-----ERQVKTPISATQKDARDFLQTDAR 231 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n-----~~~l~~~v~~~~~D~~~~~~~~~~ 231 (324)
+.++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|++.+ +.....+++++.+|+.++.....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~- 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP- 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS-
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc-
Confidence 457889999999999999999884 569999999999999999998865 20011379999999886421000
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChhh----hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPAT----AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~~----a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
..-....||.|+++..-. ...++..+.. |+++ |++.+..+..
T Consensus 160 -----------~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg--------G~l~i~~~~~ 206 (383)
T 4fsd_A 160 -----------EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDG--------GELYFSDVYA 206 (383)
T ss_dssp -----------CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--------EEEEEEEEEE
T ss_pred -----------CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCC--------CEEEEEEecc
Confidence 000124599999975321 2456666655 7775 7777665443
No 223
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.85 E-value=1.4e-09 Score=104.49 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=62.9
Q ss_pred eecCcChHHHHHHHhhcc--CCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEE
Q psy16898 144 YWNSRLSTEHERVTKEVR--EGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISAT 218 (324)
Q Consensus 144 f~~~r~~~e~~~~~~~~~--~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~ 218 (324)
|+.++...+ .+++.+. ++.+|||+|||+|.+++.++++ +.+|+|+|+++.+++.| . +++++
T Consensus 21 ~~TP~~l~~--~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~-----~~~~~ 86 (421)
T 2ih2_A 21 VETPPEVVD--FMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------P-----WAEGI 86 (421)
T ss_dssp CCCCHHHHH--HHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------T-----TEEEE
T ss_pred EeCCHHHHH--HHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------C-----CCcEE
Confidence 455552222 3444443 5679999999999999999983 46999999999998776 2 58899
Q ss_pred eccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 219 QKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 219 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
++|+.++.. ...||+|++|||+.
T Consensus 87 ~~D~~~~~~-------------------~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 87 LADFLLWEP-------------------GEAFDLILGNPPYG 109 (421)
T ss_dssp ESCGGGCCC-------------------SSCEEEEEECCCCC
T ss_pred eCChhhcCc-------------------cCCCCEEEECcCcc
Confidence 999876421 13599999999984
No 224
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.84 E-value=2.9e-09 Score=106.20 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCCchhHHHHHhc-----CCEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCeEEEeccHHHH--HHHHHHHh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR-----GAIVAANDLNPDSYAWLQASIRLNERQVK-TPISATQKDARDF--LQTDARAH 233 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~-----g~~V~avD~~~~a~~~a~~N~~~n~~~l~-~~v~~~~~D~~~~--~~~~~~~~ 233 (324)
++.+|+|++||+|+|.+.+++. ...++|+|+++.++..|+.|+..++ +. +++.+.++|.... ..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--i~~~~~~I~~gDtL~~d~p~------ 292 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG--VPIENQFLHNADTLDEDWPT------ 292 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCTTTSCSCC------
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC--CCcCccceEecceecccccc------
Confidence 6789999999999999999874 4599999999999999999999999 74 3688999997642 11
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
.....||+||+|||+.
T Consensus 293 -----------~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 293 -----------QEPTNFDGVLMNPPYS 308 (542)
T ss_dssp -----------SSCCCBSEEEECCCTT
T ss_pred -----------cccccccEEEecCCcC
Confidence 0124699999999985
No 225
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.84 E-value=1.6e-09 Score=94.59 Aligned_cols=63 Identities=22% Similarity=0.216 Sum_probs=52.2
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHH----HhCCCCCCCeEEEeccHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIR----LNERQVKTPISATQKDARDF 225 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~----~n~~~l~~~v~~~~~D~~~~ 225 (324)
+.++.+|||+|||+|.++..+++. +++|+|+|+|+.|++.+.++++ .++ ++ +++++++|+.++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~--~~-~v~~~~~d~~~l 93 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG--LP-NLLYLWATAERL 93 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC--CT-TEEEEECCSTTC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC--CC-ceEEEecchhhC
Confidence 567889999999999999999997 6799999999998886544443 345 55 799999999873
No 226
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.84 E-value=6.3e-09 Score=91.58 Aligned_cols=88 Identities=22% Similarity=0.194 Sum_probs=67.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++. . +++++++|+.++..
T Consensus 38 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~---~-----~~~~~~~d~~~~~~------------ 97 (239)
T 3bxo_A 38 TPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL---P-----DATLHQGDMRDFRL------------ 97 (239)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---T-----TCEEEECCTTTCCC------------
T ss_pred cCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---C-----CCEEEECCHHHccc------------
Confidence 467889999999999999999998889999999999999998753 2 47899999876321
Q ss_pred cCCCCCCCCcccEEEE-C-----Ch--hhhHHHHHHHhc-cchh
Q psy16898 240 SEGNSTGGTAVARVIM-N-----LP--ATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~-n-----pP--~~a~~~l~~~~~-l~~~ 274 (324)
...||.|++ . .| .....++..+.. |+++
T Consensus 98 -------~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 134 (239)
T 3bxo_A 98 -------GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPG 134 (239)
T ss_dssp -------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEE
T ss_pred -------CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCC
Confidence 135999994 2 21 223456666665 7765
No 227
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.82 E-value=1.7e-08 Score=86.21 Aligned_cols=111 Identities=16% Similarity=0.144 Sum_probs=71.9
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc-C----------CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEE-eccHHHHH
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR-G----------AIVAANDLNPDSYAWLQASIRLNERQVKTPISAT-QKDARDFL 226 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~-g----------~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~-~~D~~~~~ 226 (324)
.+.++.+|||+|||+|.+++.+++. + .+|+|+|+++. .. +. +++++ .+|+.+..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~-----------~~--~~-~~~~~~~~d~~~~~ 84 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI-----------FP--LE-GATFLCPADVTDPR 84 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC-----------CC--CT-TCEEECSCCTTSHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc-----------cc--CC-CCeEEEeccCCCHH
Confidence 3578999999999999999999985 4 79999999983 12 33 68899 99976542
Q ss_pred HHH-HHHhhhhhcccCCCCCCCCcccEEEECChhhh---------------HHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 227 QTD-ARAHLVRWSQSEGNSTGGTAVARVIMNLPATA---------------VEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 227 ~~~-~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a---------------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
... ....+. ...||+|++|++... ..++..+.. |+++ |.+.+..
T Consensus 85 ~~~~~~~~~~-----------~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~lv~~~ 145 (196)
T 2nyu_A 85 TSQRILEVLP-----------GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG--------GTFLCKT 145 (196)
T ss_dssp HHHHHHHHSG-----------GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEEE
T ss_pred HHHHHHHhcC-----------CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC--------CEEEEEe
Confidence 211 110000 135999999863210 133444433 5654 8888887
Q ss_pred cccCCChhHHhHh
Q psy16898 290 FLPKMDLETKKKI 302 (324)
Q Consensus 290 f~~~~~~~~~~~v 302 (324)
+......+..+.+
T Consensus 146 ~~~~~~~~~~~~l 158 (196)
T 2nyu_A 146 WAGSQSRRLQRRL 158 (196)
T ss_dssp CCSGGGHHHHHHH
T ss_pred cCCccHHHHHHHH
Confidence 7665444444443
No 228
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.82 E-value=1.8e-08 Score=93.02 Aligned_cols=111 Identities=13% Similarity=-0.029 Sum_probs=76.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCC-----CCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNER-----QVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~-----~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++...++. ... +++++++|+.+...... +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~---~ 108 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIF-SAEFITADSSKELLIDK---F 108 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCC-EEEEEECCTTTSCSTTT---C
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccc-eEEEEEecccccchhhh---c
Confidence 47789999999999999999975 45999999999999999999876520 022 68999999886421000 0
Q ss_pred hhhcccCCCCCCCCcccEEEECChh--------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPA--------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~--------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
. .....||.|+++..- ....++..+.. |+++ |.+.+.++..
T Consensus 109 ----~-----~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg--------G~li~~~~~~ 158 (313)
T 3bgv_A 109 ----R-----DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPG--------GYFIGTTPNS 158 (313)
T ss_dssp ----S-----STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEE--------EEEEEEEECH
T ss_pred ----c-----cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCC--------cEEEEecCCh
Confidence 0 001359999986422 12356666655 6665 7777666544
No 229
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.81 E-value=1.6e-08 Score=93.65 Aligned_cols=107 Identities=12% Similarity=-0.042 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCCCC-----CeEEEeccHHHHH-HHHHHHhh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQVKT-----PISATQKDARDFL-QTDARAHL 234 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l~~-----~v~~~~~D~~~~~-~~~~~~~~ 234 (324)
++.+|||+|||+|.....+++. +++|+|+|+|+.|++.|++.+...+ ... ++++.++|+..-. ........
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~--~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLN--SGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC--C----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcc--ccccccccccchhhhhcccchhhhhhhccc
Confidence 4789999999999877766665 4699999999999999999887665 321 2567777762100 00000000
Q ss_pred hhhcccCCCCCCCCcccEEEEC--------ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMN--------LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~n--------pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
....||+|++. ++. ...++..+.. |+++ |++.+.+.
T Consensus 126 -----------~~~~FD~V~~~~~lhy~~~~~~-~~~~l~~~~r~LkpG--------G~~i~~~~ 170 (302)
T 2vdw_A 126 -----------YFGKFNIIDWQFAIHYSFHPRH-YATVMNNLSELTASG--------GKVLITTM 170 (302)
T ss_dssp -----------CSSCEEEEEEESCGGGTCSTTT-HHHHHHHHHHHEEEE--------EEEEEEEE
T ss_pred -----------cCCCeeEEEECchHHHhCCHHH-HHHHHHHHHHHcCCC--------CEEEEEeC
Confidence 02469999863 222 2456777766 7876 77655443
No 230
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=1.1e-08 Score=92.07 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=72.6
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.+.++.+|||+|||+|.++..+++.|++|+|+|+|+.+++.++++.. + + ++++|+.++...
T Consensus 51 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~--~-----~--~~~~d~~~~~~~---------- 111 (260)
T 2avn_A 51 YLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV--K-----N--VVEAKAEDLPFP---------- 111 (260)
T ss_dssp HCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC--S-----C--EEECCTTSCCSC----------
T ss_pred hcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC--C-----C--EEECcHHHCCCC----------
Confidence 34578899999999999999999999999999999999999987643 2 2 677887653211
Q ss_pred ccCCCCCCCCcccEEEECChh-----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIMNLPA-----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~-----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++..+- ....++..+.. |+++ |.+.+..+..
T Consensus 112 --------~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lkpg--------G~l~~~~~~~ 155 (260)
T 2avn_A 112 --------SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPD--------GLLIATVDNF 155 (260)
T ss_dssp --------TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEE--------EEEEEEEEBH
T ss_pred --------CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCC--------eEEEEEeCCh
Confidence 2359999986321 13456666666 7765 7777665543
No 231
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=4.6e-09 Score=94.57 Aligned_cols=101 Identities=17% Similarity=0.167 Sum_probs=73.0
Q ss_pred HHhhc--cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 156 VTKEV--REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 156 ~~~~~--~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
+++.+ .++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.++++. +++++.+|+.++...
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~d~~~~~~~----- 91 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP---------QVEWFTGYAENLALP----- 91 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT---------TEEEECCCTTSCCSC-----
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc---------CCEEEECchhhCCCC-----
Confidence 44444 67899999999999999999999999999999999988765322 589999998763211
Q ss_pred hhhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|++...- ....++..+.. |+ + |++.+..+..
T Consensus 92 -------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-g--------G~~~~~~~~~ 133 (261)
T 3ege_A 92 -------------DKSVDGVISILAIHHFSHLEKSFQEMQRIIR-D--------GTIVLLTFDI 133 (261)
T ss_dssp -------------TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-S--------SCEEEEEECG
T ss_pred -------------CCCEeEEEEcchHhhccCHHHHHHHHHHHhC-C--------cEEEEEEcCC
Confidence 2459999986432 12345555544 55 5 7666666553
No 232
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.80 E-value=1.2e-08 Score=90.91 Aligned_cols=103 Identities=12% Similarity=-0.013 Sum_probs=76.3
Q ss_pred HHHhh--ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHH
Q psy16898 155 RVTKE--VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDA 230 (324)
Q Consensus 155 ~~~~~--~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~ 230 (324)
.+++. ..++.+|||+|||+|.++..+++. +++|+++|+|+.+++.++++ . .+++++.+|+.++. .
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~----~~~~~~~~d~~~~~-~-- 92 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----L----PNTNFGKADLATWK-P-- 92 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----S----TTSEEEECCTTTCC-C--
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----C----CCcEEEECChhhcC-c--
Confidence 34444 346789999999999999999986 78999999999999999887 2 15889999987643 1
Q ss_pred HHhhhhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 231 RAHLVRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++..- ....++..+.. |+++ |.+.+.+...
T Consensus 93 ----------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~~~~~~~ 135 (259)
T 2p35_A 93 ----------------AQKADLLYANAVFQWVPDHLAVLSQLMDQLESG--------GVLAVQMPDN 135 (259)
T ss_dssp ----------------SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE--------EEEEEEEECC
T ss_pred ----------------cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC--------eEEEEEeCCC
Confidence 2459999997532 12446666655 6765 7777666543
No 233
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.79 E-value=2.4e-09 Score=106.91 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=62.4
Q ss_pred CEEEEEcCCCchhHHHHHhc-----------------CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAARR-----------------GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFL 226 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~-----------------g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~ 226 (324)
.+|||++||+|+|.+.+++. ...++|+|+++.+++.|+.|+.+++ +..++.+.++|.....
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--i~~~i~i~~gDtL~~~ 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG--IDFNFGKKNADSFLDD 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT--CCCBCCSSSCCTTTSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC--CCcccceeccchhcCc
Confidence 39999999999999988642 3589999999999999999999999 8655555788865421
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccEEEECChhhh
Q psy16898 227 QTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
. .....||+||+|||+..
T Consensus 324 ~-----------------~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 324 Q-----------------HPDLRADFVMTNPPFNM 341 (544)
T ss_dssp S-----------------CTTCCEEEEEECCCSSC
T ss_pred c-----------------cccccccEEEECCCcCC
Confidence 0 01246999999999963
No 234
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.79 E-value=1.3e-08 Score=87.36 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=42.9
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc----CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR----GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~----g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+.++.+|||+|||+|.+++.++++ +++|+|+|+++.+ . .+ +++++++|+.+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~--~~-~v~~~~~d~~~~ 75 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P--IP-NVYFIQGEIGKD 75 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C--CT-TCEEEECCTTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C--CC-CceEEEccccch
Confidence 568889999999999999999985 4699999999931 2 33 688999998764
No 235
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.79 E-value=3.3e-09 Score=96.43 Aligned_cols=100 Identities=9% Similarity=-0.068 Sum_probs=77.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH--hCCCC-CCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRL--NERQV-KTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~--n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+.+|||+|||+|.++..+++.+.+|+++|+++.+++.|++++.. ++ + ..+++++.+|+.+++ .
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~--~~~~rv~~~~~D~~~~~-~--------- 138 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEV--KNNKNFTHAKQLLDLDI-K--------- 138 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHH--HTCTTEEEESSGGGSCC-C---------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccc--cCCCeEEEEechHHHHH-h---------
Confidence 3568999999999999999988767999999999999999987643 22 2 237999999998764 1
Q ss_pred cccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
.||+|++|.+. ...|++.+.. |+++ |++.+..-+.
T Consensus 139 -----------~fD~Ii~d~~d-p~~~~~~~~~~L~pg--------G~lv~~~~~~ 174 (262)
T 2cmg_A 139 -----------KYDLIFCLQEP-DIHRIDGLKRMLKED--------GVFISVAKHP 174 (262)
T ss_dssp -----------CEEEEEESSCC-CHHHHHHHHTTEEEE--------EEEEEEEECT
T ss_pred -----------hCCEEEECCCC-hHHHHHHHHHhcCCC--------cEEEEEcCCc
Confidence 29999999865 3457777766 7775 7777654443
No 236
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.78 E-value=1.5e-08 Score=87.66 Aligned_cols=98 Identities=11% Similarity=-0.005 Sum_probs=72.1
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
...++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.+++++ . ++.++++|+.++...
T Consensus 33 ~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~~d~~~~~~~--------- 92 (211)
T 2gs9_A 33 LLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---P-----EATWVRAWGEALPFP--------- 92 (211)
T ss_dssp TCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---T-----TSEEECCCTTSCCSC---------
T ss_pred hcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---C-----CcEEEEcccccCCCC---------
Confidence 3457889999999999999887 67 9999999999999998876 2 478899998753211
Q ss_pred cccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||.|+++-.- ....++..+.. |+++ |.+.+..+...
T Consensus 93 ---------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~i~~~~~~ 136 (211)
T 2gs9_A 93 ---------GESFDVVLLFTTLEFVEDVERVLLEARRVLRPG--------GALVVGVLEAL 136 (211)
T ss_dssp ---------SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEE--------EEEEEEEECTT
T ss_pred ---------CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCC--------CEEEEEecCCc
Confidence 2459999986321 13456666665 7765 77776665443
No 237
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.76 E-value=2.1e-08 Score=94.76 Aligned_cols=100 Identities=16% Similarity=0.047 Sum_probs=78.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++|+..++ +.++++++.+|+.+.+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~----------- 245 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFKPL----------- 245 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTSCC-----------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCcC-----------
Confidence 357789999999999999999985 569999999 999999999999988 8778999999987511
Q ss_pred cccCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEc
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f 290 (324)
+..||+|+++ .|.. ...++..+.. |+++ |.+.+..+
T Consensus 246 ---------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~ 288 (374)
T 1qzz_A 246 ---------PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG--------GRLLVLDR 288 (374)
T ss_dssp ---------SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEC
T ss_pred ---------CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCC--------cEEEEEec
Confidence 1239999885 2332 2457777766 7765 77776665
No 238
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.75 E-value=1.6e-09 Score=98.83 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=70.0
Q ss_pred HHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhh
Q psy16898 156 VTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
++..+ .+..+||+|+|+|.+++.+.+++.+++.+|.++.+++.+++|++.. ++++++++|+...+.....
T Consensus 86 ~l~~~-n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~-----~~~~V~~~D~~~~L~~l~~---- 155 (283)
T 2oo3_A 86 VIKQI-NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN-----KKVYVNHTDGVSKLNALLP---- 155 (283)
T ss_dssp HHHHH-SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT-----SCEEEECSCHHHHHHHHCS----
T ss_pred HHHHh-cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC-----CcEEEEeCcHHHHHHHhcC----
Confidence 34444 3556899999999999999997779999999999999999998642 3799999999988775421
Q ss_pred hhcccCCCCCCCCcccEEEECChhhh
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
++.+||.|++|||+..
T Consensus 156 ----------~~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 156 ----------PPEKRGLIFIDPSYER 171 (283)
T ss_dssp ----------CTTSCEEEEECCCCCS
T ss_pred ----------CCCCccEEEECCCCCC
Confidence 1245999999999963
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.74 E-value=1.4e-09 Score=99.72 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=70.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEE--eccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISAT--QKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~--~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|.+|||+|||+|.++..++++ .+|+|+|+++ ++..++++... +. ...++.++ ++|+.++.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~--~~~~v~~~~~~~D~~~l~---------- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVET--FGWNLITFKSKVDVTKME---------- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCC--TTGGGEEEECSCCGGGCC----------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhh--cCCCeEEEeccCcHhhCC----------
Confidence 567899999999999999999998 7899999999 43333221100 11 11268899 99988732
Q ss_pred hcccCCCCCCCCcccEEEECChhh----------hHHHHHHHhc-cchhhcCCCCCCC--EEEEEEcccCC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT----------AVEYVRYLKV-LTREEFGKLSRPP--VLYLYCFLPKM 294 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~----------a~~~l~~~~~-l~~~~~~~~~~~g--~vh~y~f~~~~ 294 (324)
...||.|++|.... ....++.+.. |+++ | .+.+-.|.+..
T Consensus 146 ----------~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpG--------G~~~~v~~~~~~~~ 198 (276)
T 2wa2_A 146 ----------PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYN--------QGCGFCVKVLNPYS 198 (276)
T ss_dssp ----------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHS--------TTCEEEEEESCCCS
T ss_pred ----------CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccC--------CCcEEEEEeCCCCc
Confidence 13599999996511 1124555544 6665 8 88888888443
No 240
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.73 E-value=9.5e-09 Score=91.83 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=42.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n 207 (324)
.++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.+++++..+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcC
Confidence 4678999999999999999999887 9999999999999999988644
No 241
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.72 E-value=3.6e-08 Score=91.64 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=79.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.++..+++. +.+++++|++ .+++.|++++..++ +.++++++.+|+.+...
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~----------- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEVDY----------- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTSCC-----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccCCC-----------
Confidence 66789999999999999999985 6799999999 99999999999988 87689999999875310
Q ss_pred ccCCCCCCCCcccEEEE-CChh-----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 239 QSEGNSTGGTAVARVIM-NLPA-----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~-npP~-----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
...||+|++ +... ....++..+.. ++++ |.+.+..+...
T Consensus 230 --------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~~~ 275 (335)
T 2r3s_A 230 --------GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVE--------GKVIVFDFIPN 275 (335)
T ss_dssp --------CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEECCCC
T ss_pred --------CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCC--------cEEEEEeecCC
Confidence 123999998 3222 22456666666 7765 77776665543
No 242
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.71 E-value=4.5e-08 Score=92.31 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=77.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++++..++ +.++++++.+|+.+...
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---------- 254 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKESY---------- 254 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTSCC----------
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccCCC----------
Confidence 357789999999999999999985 569999999 999999999999988 87679999999876311
Q ss_pred cccCCCCCCCCcccEEEECC-----hh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMNL-----PA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~np-----P~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
..+|+|++.- |. ....++..+.. +++ +|.+.+..+..
T Consensus 255 ----------~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p--------gG~l~i~e~~~ 298 (359)
T 1x19_A 255 ----------PEADAVLFCRILYSANEQLSTIMCKKAFDAMRS--------GGRLLILDMVI 298 (359)
T ss_dssp ----------CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT--------TCEEEEEEECC
T ss_pred ----------CCCCEEEEechhccCCHHHHHHHHHHHHHhcCC--------CCEEEEEeccc
Confidence 1259998852 22 23456666655 555 48776665443
No 243
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.70 E-value=1.4e-09 Score=98.94 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=69.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEE--eccHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISAT--QKDARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~--~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|.+|||+|||+|.++..++++ .+|+|+|+++ ++..++++... +. ...++.++ ++|+.++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~--~~~~v~~~~~~~D~~~l~---------- 137 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITES--YGWNIVKFKSRVDIHTLP---------- 137 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCB--TTGGGEEEECSCCTTTSC----------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhc--cCCCeEEEecccCHhHCC----------
Confidence 568899999999999999999998 7899999998 43222211100 01 11158899 99988632
Q ss_pred hcccCCCCCCCCcccEEEECChhh----------hHHHHHHHhc-cchhhcCCCCCCC--EEEEEEcccC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPAT----------AVEYVRYLKV-LTREEFGKLSRPP--VLYLYCFLPK 293 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~----------a~~~l~~~~~-l~~~~~~~~~~~g--~vh~y~f~~~ 293 (324)
...||.|++|.... ....++.+.. |+++ | .+.+-.|.+.
T Consensus 138 ----------~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpG--------G~~~fv~kv~~~~ 189 (265)
T 2oxt_A 138 ----------VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKN--------PSADFVVKVLCPY 189 (265)
T ss_dssp ----------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHC--------TTCEEEEEESCTT
T ss_pred ----------CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccC--------CCeEEEEEeCCCC
Confidence 13599999986511 1124454444 6664 8 8888888843
No 244
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.70 E-value=9.9e-09 Score=92.71 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=42.5
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n 207 (324)
.+|.+|||+|||+|.+++.++..|+ +|+|+|+|+.|++.|+++++.+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC
Confidence 4678999999999999998888887 7999999999999999998754
No 245
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.69 E-value=4.5e-08 Score=92.63 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=78.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
....+|||+|||+|.++..+++ .+.+|+++|+ +.+++.|++++...+ +.++++++.+|+.+....
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~---------- 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVP---------- 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCC----------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCC----------
Confidence 4667999999999999999998 4669999999 999999999998887 766899999998752000
Q ss_pred ccCCCCCCCCcccEEEE-----CChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIM-----NLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~-----npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
.+..||.|++ +.|. ....++..+.. |+++ |.+.+..+..
T Consensus 245 -------~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~~ 290 (363)
T 3dp7_A 245 -------FPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKD--------SKVYIMETLW 290 (363)
T ss_dssp -------CCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTT--------CEEEEEECCT
T ss_pred -------CCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCC--------cEEEEEeecc
Confidence 0134999988 3333 23456766665 6664 7777665433
No 246
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.68 E-value=4.4e-08 Score=92.19 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=78.6
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++|+..++ +.++++++.+|+.+.+.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~---------- 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG--LSDRVDVVEGDFFEPLP---------- 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT--CTTTEEEEECCTTSCCS----------
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCCCC----------
Confidence 346789999999999999999985 459999999 999999999999988 87789999999875211
Q ss_pred cccCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
..||.|++. .|.. ...++..+.. |+++ |.+.+..+.
T Consensus 248 ----------~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~ 290 (360)
T 1tw3_A 248 ----------RKADAIILSFVLLNWPDHDAVRILTRCAEALEPG--------GRILIHERD 290 (360)
T ss_dssp ----------SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE--------EEEEEEECC
T ss_pred ----------CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCC--------cEEEEEEEe
Confidence 239999884 2322 2457777766 7765 777766655
No 247
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.68 E-value=2.3e-07 Score=84.56 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=74.6
Q ss_pred CCEEEEEcCCC---chhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHH--HH--HHh
Q psy16898 163 GDLVLDVFAGV---GPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQT--DA--RAH 233 (324)
Q Consensus 163 g~~VLDl~~G~---G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~--~~--~~~ 233 (324)
..+|||+|||+ |.++..+++ .+++|+++|+||.|++.|++++..+ ++++++++|+.+...- .. ...
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-----PNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-----CCeEEEEeeCCCchhhhccchhhcc
Confidence 47999999999 998876665 3679999999999999999988532 3799999999764211 00 000
Q ss_pred hhhhcccCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
.. ...||.|+++ .|. ....++..+.. |+++ |++.+..+...
T Consensus 153 -~d----------~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pG--------G~l~i~~~~~~ 200 (274)
T 2qe6_A 153 -ID----------FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPG--------SYLFMTSLVDT 200 (274)
T ss_dssp -CC----------TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTT--------CEEEEEEEBCS
T ss_pred -CC----------CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCC--------cEEEEEEecCc
Confidence 00 1248999986 243 23456666665 6664 88877766653
No 248
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.67 E-value=1.4e-08 Score=91.65 Aligned_cols=76 Identities=11% Similarity=0.143 Sum_probs=63.1
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
.+.+..+|||+|||+|.+++.++.. .++|+|+|+|+.+++.+++|+..|+ +. ..+...|...-.
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g--~~--~~~~v~D~~~~~---------- 194 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN--VP--HRTNVADLLEDR---------- 194 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT--CC--EEEEECCTTTSC----------
T ss_pred ccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC--CC--ceEEEeeecccC----------
Confidence 4456779999999999999999874 4599999999999999999999999 75 788888865421
Q ss_pred hcccCCCCCCCCcccEEEECC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNL 257 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~np 257 (324)
+...+|+++++.
T Consensus 195 ---------p~~~~DvaL~lk 206 (281)
T 3lcv_B 195 ---------LDEPADVTLLLK 206 (281)
T ss_dssp ---------CCSCCSEEEETT
T ss_pred ---------CCCCcchHHHHH
Confidence 235699999984
No 249
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.67 E-value=7.3e-09 Score=92.42 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=69.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc------CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH--HHHHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR------GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF--LQTDARA 232 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~------g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~--~~~~~~~ 232 (324)
.++.+|||+|||+|..++.+|+. +++|+|+|+++.+++.|+ + +.++++++++|+.+. +... .
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~--~~~~v~~~~gD~~~~~~l~~~-~- 149 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------S--DMENITLHQGDCSDLTTFEHL-R- 149 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------G--GCTTEEEEECCSSCSGGGGGG-S-
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------c--cCCceEEEECcchhHHHHHhh-c-
Confidence 36789999999999999999986 679999999999998886 2 324799999999864 2211 0
Q ss_pred hhhhhcccCCCCCCCCcccEEEECChhh-hHHHHHHHh--ccchhhcCCCCCCCEEEEEEc
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNLPAT-AVEYVRYLK--VLTREEFGKLSRPPVLYLYCF 290 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~npP~~-a~~~l~~~~--~l~~~~~~~~~~~g~vh~y~f 290 (324)
...||.|++|.... ...++..+. .|+ +||++.+..+
T Consensus 150 --------------~~~fD~I~~d~~~~~~~~~l~~~~r~~Lk--------pGG~lv~~d~ 188 (236)
T 2bm8_A 150 --------------EMAHPLIFIDNAHANTFNIMKWAVDHLLE--------EGDYFIIEDM 188 (236)
T ss_dssp --------------SSCSSEEEEESSCSSHHHHHHHHHHHTCC--------TTCEEEECSC
T ss_pred --------------cCCCCEEEECCchHhHHHHHHHHHHhhCC--------CCCEEEEEeC
Confidence 12499999886532 122333332 344 4588888654
No 250
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.67 E-value=3.4e-08 Score=88.86 Aligned_cols=97 Identities=11% Similarity=0.042 Sum_probs=72.4
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.++..+++. +++|+|+|+|+.+++.|+++. . ++.+..+|+.++...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~~d~~~~~~~---------- 145 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---P-----QVTFCVASSHRLPFS---------- 145 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---T-----TSEEEECCTTSCSBC----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---C-----CcEEEEcchhhCCCC----------
Confidence 57889999999999999999986 779999999999999987653 1 478889998653211
Q ss_pred ccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCC
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
...||.|+++.... ++..+.. |+++ |.+.+.......
T Consensus 146 --------~~~fD~v~~~~~~~---~l~~~~~~L~pg--------G~l~~~~~~~~~ 183 (269)
T 1p91_A 146 --------DTSMDAIIRIYAPC---KAEELARVVKPG--------GWVITATPGPRH 183 (269)
T ss_dssp --------TTCEEEEEEESCCC---CHHHHHHHEEEE--------EEEEEEEECTTT
T ss_pred --------CCceeEEEEeCChh---hHHHHHHhcCCC--------cEEEEEEcCHHH
Confidence 13599999865432 3455544 7765 888777666543
No 251
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.65 E-value=1.2e-07 Score=89.86 Aligned_cols=103 Identities=10% Similarity=0.048 Sum_probs=79.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.|++++...+ +.+++++..+|+.+..
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~----------- 265 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG--LADRCEILPGDFFETI----------- 265 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTTCC-----------
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC--cCCceEEeccCCCCCC-----------
Confidence 346789999999999999999985 569999999 999999999999888 8778999999987311
Q ss_pred cccCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
+..||+|++. .|.. ...++..+.. |++ ||.+.+..+...
T Consensus 266 ---------p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p--------gG~l~i~e~~~~ 311 (369)
T 3gwz_A 266 ---------PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKP--------DSRLLVIDNLID 311 (369)
T ss_dssp ---------CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT--------TCEEEEEEEBCC
T ss_pred ---------CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCC--------CCEEEEEEeccC
Confidence 1249999883 3332 3457777766 665 488777655443
No 252
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.65 E-value=3.3e-08 Score=88.36 Aligned_cols=72 Identities=15% Similarity=0.089 Sum_probs=61.5
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.+..+|||+|||+|.++++++ .+..++|+|+++.+++.+++|+..++ .+ ..+..+|......
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g--~~--~~~~v~D~~~~~~------------- 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD--WD--FTFALQDVLCAPP------------- 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT--CE--EEEEECCTTTSCC-------------
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC--CC--ceEEEeecccCCC-------------
Confidence 567899999999999999988 66699999999999999999999998 54 8889999764321
Q ss_pred CCCCCCCCcccEEEEC
Q psy16898 241 EGNSTGGTAVARVIMN 256 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~n 256 (324)
+..+|+|+++
T Consensus 166 ------~~~~DvvLll 175 (253)
T 3frh_A 166 ------AEAGDLALIF 175 (253)
T ss_dssp ------CCBCSEEEEE
T ss_pred ------CCCcchHHHH
Confidence 3469999887
No 253
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.64 E-value=9.5e-08 Score=89.59 Aligned_cols=101 Identities=20% Similarity=0.230 Sum_probs=78.3
Q ss_pred CCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 163 GDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
+.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++++...+ +.++++++.+|+.+.....
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~----------- 245 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD--LGGRVEFFEKNLLDARNFE----------- 245 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CGGGEEEEECCTTCGGGGT-----------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC--CCCceEEEeCCcccCcccC-----------
Confidence 789999999999999999985 569999999 899999999999888 8778999999987642100
Q ss_pred CCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 241 EGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...||.|++. .|. ....++..+.. |+++ |.+.+..+.
T Consensus 246 ------~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~ 289 (352)
T 3mcz_A 246 ------GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPG--------GALLILTMT 289 (352)
T ss_dssp ------TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE--------EEEEEEEEC
T ss_pred ------CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCC--------CEEEEEEec
Confidence 1349999984 232 24567777766 7765 777666543
No 254
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.63 E-value=1.1e-07 Score=88.62 Aligned_cols=100 Identities=13% Similarity=0.007 Sum_probs=78.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
++.+|||+|||+|.++..+++ .+.+++++|+ +.+++.|++++...+ +.+++++..+|+.+-.
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~------------- 232 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG--LSGRAQVVVGSFFDPL------------- 232 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTSCC-------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC--cCcCeEEecCCCCCCC-------------
Confidence 567999999999999999998 3569999999 999999999999888 8778999999986311
Q ss_pred cCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 240 SEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
+..||+|++. .|.. ...++..+.. |+++ |.+.+..+..
T Consensus 233 -------p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~~ 277 (332)
T 3i53_A 233 -------PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSG--------GVVLVIEAVA 277 (332)
T ss_dssp -------CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTT--------CEEEEEECCC
T ss_pred -------CCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCC--------CEEEEEeecC
Confidence 1149999883 4432 3567777766 7765 7877766543
No 255
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.57 E-value=9.1e-09 Score=91.74 Aligned_cols=43 Identities=30% Similarity=0.426 Sum_probs=38.9
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASI 204 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~ 204 (324)
++.+|||+|||+|.++..+++.|+ +|+|+|+|+.|++.+++|.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC
Confidence 577999999999999999999986 9999999999999877643
No 256
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.56 E-value=7.8e-08 Score=89.51 Aligned_cols=98 Identities=10% Similarity=0.007 Sum_probs=75.7
Q ss_pred CEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 164 DLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++++..++ +.++++++.+|+.+..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~--------------- 230 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQEV--------------- 230 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTTCC---------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCCCC---------------
Confidence 89999999999999999985 569999999 999999999998877 7668999999987511
Q ss_pred CCCCCCCcccEEEECC-----h-hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 242 GNSTGGTAVARVIMNL-----P-ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~np-----P-~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
+..||+|++.- | .....++..+.. ++++ |.+.+..+..
T Consensus 231 -----~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~~ 275 (334)
T 2ip2_A 231 -----PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGD--------GRVVVIERTI 275 (334)
T ss_dssp -----CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTT--------CEEEEEECCB
T ss_pred -----CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCC--------CEEEEEEecc
Confidence 13499999852 2 223456666665 6654 8777665543
No 257
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.55 E-value=1.6e-07 Score=85.53 Aligned_cols=91 Identities=19% Similarity=0.214 Sum_probs=74.0
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.+|++++|++||.|+.+..+++++++|+|+|.+|.|++.|++ +.. +++++++++..++........
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~L~~~g------ 86 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRHLAALG------ 86 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHHHHHTT------
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHHHHHcC------
Confidence 4678999999999999999999987899999999999999988 532 279999999988754332210
Q ss_pred cCCCCCCCCcccEEEECChhhhHHHHHHHhc
Q psy16898 240 SEGNSTGGTAVARVIMNLPATAVEYVRYLKV 270 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~ 270 (324)
...+|.|++||..++.++=++-++
T Consensus 87 -------~~~vDgIL~DLGvSS~Qld~~~RG 110 (285)
T 1wg8_A 87 -------VERVDGILADLGVSSFHLDDPSRG 110 (285)
T ss_dssp -------CSCEEEEEEECSCCHHHHHCGGGC
T ss_pred -------CCCcCEEEeCCccccccccccccC
Confidence 135999999999988887555577
No 258
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.52 E-value=1.5e-08 Score=93.98 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=66.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeC----CHHHHHHHHHHHHHhCCCC-CCCeEEEec-cHHHHHHHHHHHh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDL----NPDSYAWLQASIRLNERQV-KTPISATQK-DARDFLQTDARAH 233 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~----~~~a~~~a~~N~~~n~~~l-~~~v~~~~~-D~~~~~~~~~~~~ 233 (324)
+.+|.+|||+|||+|.++..++++ ++|+|+|+ ++.+++.+. .+. . .++++++++ |+.++.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~----~~~--~~~~~v~~~~~~D~~~l~------- 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP----MST--YGWNLVRLQSGVDVFFIP------- 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC----CCS--TTGGGEEEECSCCTTTSC-------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH----hhh--cCCCCeEEEeccccccCC-------
Confidence 567899999999999999999998 58999999 554332111 111 2 136899998 877531
Q ss_pred hhhhcccCCCCCCCCcccEEEECChhh----h------HHHHHHHhccchhhcCCCCCCCEEEEEEcccCC
Q psy16898 234 LVRWSQSEGNSTGGTAVARVIMNLPAT----A------VEYVRYLKVLTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~Vi~npP~~----a------~~~l~~~~~l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
...||+|++|.+.. . ...+..+.. .+++||.+.+-.|.+..
T Consensus 146 -------------~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~-------~LkpGG~~v~kv~~~~~ 196 (305)
T 2p41_A 146 -------------PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVEN-------WLSNNTQFCVKVLNPYM 196 (305)
T ss_dssp -------------CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHH-------HCCTTCEEEEEESCCCS
T ss_pred -------------cCCCCEEEECCccccCcchhhHHHHHHHHHHHHH-------HhCCCCEEEEEeCCCCC
Confidence 13499999996521 0 122333322 23445888887776643
No 259
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.51 E-value=7.2e-08 Score=95.98 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=70.9
Q ss_pred eeecCcChHHHHH-HHhh--ccCCCEEEEEcCCCchhHHHHHhc---------------CCEEEEEeCCHHHHHHHHHHH
Q psy16898 143 VYWNSRLSTEHER-VTKE--VREGDLVLDVFAGVGPFSIPAARR---------------GAIVAANDLNPDSYAWLQASI 204 (324)
Q Consensus 143 ~f~~~r~~~e~~~-~~~~--~~~g~~VLDl~~G~G~~al~~a~~---------------g~~V~avD~~~~a~~~a~~N~ 204 (324)
-|+.|+ +.-+ +++. ..+|.+|+|.+||+|+|.+.+.+. ...++|+|+++.++..|+.|+
T Consensus 198 qfyTP~---~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 198 EFYTPR---PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp CCCCCH---HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred eECCcH---HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 366677 3333 3333 346789999999999999888651 236999999999999999999
Q ss_pred HHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 205 RLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 205 ~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
-+.+ +. ...+.++|.......... ...+||+||+|||..
T Consensus 275 ~lhg--~~-~~~I~~~dtL~~~~~~~~--------------~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 275 LLHG--LE-YPRIDPENSLRFPLREMG--------------DKDRVDVILTNPPFG 313 (530)
T ss_dssp HHHT--CS-CCEEECSCTTCSCGGGCC--------------GGGCBSEEEECCCSS
T ss_pred HhcC--Cc-cccccccccccCchhhhc--------------ccccceEEEecCCCC
Confidence 9998 76 456778887643211100 023599999999995
No 260
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.51 E-value=9.7e-08 Score=87.90 Aligned_cols=57 Identities=25% Similarity=0.331 Sum_probs=43.8
Q ss_pred ecCcChHHHHHHHhhc---cCCCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHH
Q psy16898 145 WNSRLSTEHERVTKEV---REGDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 145 ~~~r~~~e~~~~~~~~---~~g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~ 201 (324)
|.+|-......+++.+ .+|.+|||+|||||.|+..+++.|+ +|+|+|+++.|++++.
T Consensus 65 yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~ 125 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL 125 (291)
T ss_dssp SSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH
T ss_pred cccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 3455443333444443 2678999999999999999999886 9999999999999854
No 261
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.51 E-value=1.3e-07 Score=86.16 Aligned_cols=44 Identities=14% Similarity=0.123 Sum_probs=38.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQASIR 205 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~N~~ 205 (324)
++.+|||+|||+|.+++.+++ .+.+|+|+|+|+.|++.|+++++
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHh
Confidence 678999999999997776665 46799999999999999998765
No 262
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.48 E-value=8.9e-07 Score=80.87 Aligned_cols=108 Identities=6% Similarity=0.113 Sum_probs=69.8
Q ss_pred cCCCEEEEEcCCCchhHHHHH----h--cCCEE--EEEeCCHHHHHHHHHHHHHh-CCCCCCCe--EEEeccHHHHHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAA----R--RGAIV--AANDLNPDSYAWLQASIRLN-ERQVKTPI--SATQKDARDFLQTD 229 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a----~--~g~~V--~avD~~~~a~~~a~~N~~~n-~~~l~~~v--~~~~~D~~~~~~~~ 229 (324)
.++.+|||+|||+|.++..++ . .+..| +|+|.|+.|++.|++++... + +. ++ .+..+++.++....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~-~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LE-NVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CT-TEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CC-cceEEEEecchhhhhhhh
Confidence 356799999999998876433 2 24544 99999999999999998753 3 43 44 45677877654321
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEEC-----ChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMN-----LPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~n-----pP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
... -....||+|++. .|+ ...++..+.. |+++ |.+.+-.+..
T Consensus 128 ~~~------------~~~~~fD~V~~~~~l~~~~d-~~~~l~~~~r~Lkpg--------G~l~i~~~~~ 175 (292)
T 2aot_A 128 LEK------------KELQKWDFIHMIQMLYYVKD-IPATLKFFHSLLGTN--------AKMLIIVVSG 175 (292)
T ss_dssp HTT------------TCCCCEEEEEEESCGGGCSC-HHHHHHHHHHTEEEE--------EEEEEEEECT
T ss_pred ccc------------cCCCceeEEEEeeeeeecCC-HHHHHHHHHHHcCCC--------cEEEEEEecC
Confidence 100 002459999985 333 2345666655 7776 7777655443
No 263
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.47 E-value=2.3e-07 Score=89.11 Aligned_cols=89 Identities=9% Similarity=0.084 Sum_probs=63.0
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeE-EEeccHHHHHHHHHHHhhhhhcc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPIS-ATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~-~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
.++.+|||+|||+|.++..+++.|.+|+|+|+|+.+++.|+++ + +..... +...++.++...
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~--~~~~~~~~~~~~~~~l~~~----------- 168 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----G--IRVRTDFFEKATADDVRRT----------- 168 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----T--CCEECSCCSHHHHHHHHHH-----------
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----C--CCcceeeechhhHhhcccC-----------
Confidence 4788999999999999999999999999999999999998875 4 431111 222333332211
Q ss_pred cCCCCCCCCcccEEEEC-----ChhhhHHHHHHHhc-cchh
Q psy16898 240 SEGNSTGGTAVARVIMN-----LPATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~n-----pP~~a~~~l~~~~~-l~~~ 274 (324)
...||+|+++ .|. ...++..+.. |+++
T Consensus 169 -------~~~fD~I~~~~vl~h~~d-~~~~l~~~~r~Lkpg 201 (416)
T 4e2x_A 169 -------EGPANVIYAANTLCHIPY-VQSVLEGVDALLAPD 201 (416)
T ss_dssp -------HCCEEEEEEESCGGGCTT-HHHHHHHHHHHEEEE
T ss_pred -------CCCEEEEEECChHHhcCC-HHHHHHHHHHHcCCC
Confidence 1359999986 232 3457777766 7775
No 264
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.47 E-value=2.9e-07 Score=80.29 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=68.7
Q ss_pred HhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 157 TKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 157 ~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+..+.++.+|||+|||+|.++..+++. +++|+|+.+++.++++ + ++++++|+.++...
T Consensus 42 l~~~~~~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~----~------~~~~~~d~~~~~~~-------- 99 (219)
T 1vlm_A 42 VKCLLPEGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR----G------VFVLKGTAENLPLK-------- 99 (219)
T ss_dssp HHHHCCSSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT----T------CEEEECBTTBCCSC--------
T ss_pred HHHhCCCCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc----C------CEEEEcccccCCCC--------
Confidence 333445889999999999999998876 9999999999998876 4 56788887653211
Q ss_pred hcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++-.- ....++..+.. |+++ |.+.+..+..
T Consensus 100 ----------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--------G~l~i~~~~~ 142 (219)
T 1vlm_A 100 ----------DESFDFALMVTTICFVDDPERALKEAYRILKKG--------GYLIVGIVDR 142 (219)
T ss_dssp ----------TTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEE--------EEEEEEEECS
T ss_pred ----------CCCeeEEEEcchHhhccCHHHHHHHHHHHcCCC--------cEEEEEEeCC
Confidence 2359999986321 13456666665 7765 7776665543
No 265
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.47 E-value=7.6e-08 Score=98.87 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCCchhHHHHHhcC-----CEEEEEeCCHHHHHHH--HHHHHHhCCCCCC---CeEEEeccHHHHHHHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRG-----AIVAANDLNPDSYAWL--QASIRLNERQVKT---PISATQKDARDFLQTDAR 231 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g-----~~V~avD~~~~a~~~a--~~N~~~n~~~l~~---~v~~~~~D~~~~~~~~~~ 231 (324)
++.+|||+|||+|.|.+.+++.. ..++|+|+++.+++.| +.|+..|. +.. ...+...|..+.....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~--LlhGi~~~~I~~dD~L~~~~~~-- 396 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ--LVSSNNAPTITGEDVCSLNPED-- 396 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT--TCBTTBCCEEECCCGGGCCGGG--
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh--hhcCCCcceEEecchhcccccc--
Confidence 57899999999999999999853 3799999999999999 88887654 321 2355666665421100
Q ss_pred HhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 232 AHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...||+||+|||+.
T Consensus 397 ---------------~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 397 ---------------FANVSVVVMNPPYV 410 (878)
T ss_dssp ---------------GTTEEEEEECCBCC
T ss_pred ---------------cCCCCEEEECCCcc
Confidence 13599999999994
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.44 E-value=1.4e-06 Score=75.92 Aligned_cols=138 Identities=14% Similarity=0.053 Sum_probs=88.8
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhCCCC--CCCeEEEeccHHHH----------
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR-GAIVAANDLNPDSYAWLQASIRLNERQV--KTPISATQKDARDF---------- 225 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~-g~~V~avD~~~~a~~~a~~N~~~n~~~l--~~~v~~~~~D~~~~---------- 225 (324)
.+.+.++||++|| |.-++.+|+. +++|+++|.+++..+.|++|++.++ + .++++++.+|+.+.
T Consensus 27 ~l~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g--~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 27 AYEEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANP--PAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHHHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSC--CCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred HhhCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcC--CCCCCceEEEEeCchhhhcccccccch
Confidence 4557789999998 5677778875 6799999999999999999999999 8 77899999997543
Q ss_pred ----HHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc-cCCChhHH
Q psy16898 226 ----LQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL-PKMDLETK 299 (324)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~-~~~~~~~~ 299 (324)
+...... +... .....||.|++|-.... .++..... +++ ||+|.+..+. +.......
T Consensus 103 ~~~~l~~~~~~-i~~~-------~~~~~fDlIfIDg~k~~-~~~~~~l~~l~~--------GG~Iv~DNv~~r~~y~~v~ 165 (202)
T 3cvo_A 103 KWRSYPDYPLA-VWRT-------EGFRHPDVVLVDGRFRV-GCALATAFSITR--------PVTLLFDDYSQRRWQHQVE 165 (202)
T ss_dssp TGGGTTHHHHG-GGGC-------TTCCCCSEEEECSSSHH-HHHHHHHHHCSS--------CEEEEETTGGGCSSGGGGH
T ss_pred hhhhHHHHhhh-hhcc-------ccCCCCCEEEEeCCCch-hHHHHHHHhcCC--------CeEEEEeCCcCCcchHHHH
Confidence 1111110 0000 00145999999976432 33333333 544 5888766543 33444445
Q ss_pred hHhhhcCCCceEEEEeec
Q psy16898 300 KKIKSYDPSYATLIRGIR 317 (324)
Q Consensus 300 ~~v~~y~~~~~~~i~~~~ 317 (324)
+.++.-....++.+..++
T Consensus 166 ~~~~~~~~~~~~a~f~~~ 183 (202)
T 3cvo_A 166 EFLGAPLMIGRLAAFQVE 183 (202)
T ss_dssp HHHCCCEEETTEEEEEEC
T ss_pred HHHhHHhhcCceEEEEeC
Confidence 555432223356666654
No 267
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.40 E-value=8.3e-07 Score=89.96 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=69.4
Q ss_pred CCEEEEEcCCCchhHH---HHHh-cC-----------CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHH
Q psy16898 163 GDLVLDVFAGVGPFSI---PAAR-RG-----------AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQ 227 (324)
Q Consensus 163 g~~VLDl~~G~G~~al---~~a~-~g-----------~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~ 227 (324)
+.+|||+|||+|.++. .+++ .| .+|+|||.|+.|+..++.... |+ +.++|+++.+|++++-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--TTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--CCCeEEEEeCchhhccc
Confidence 4589999999999964 3443 22 299999999999887776665 88 88889999999999854
Q ss_pred HHHHHhhhhhcccCCCCCCCCcccEEEECChhh------hHHHHHHHhc-cchh
Q psy16898 228 TDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~------a~~~l~~~~~-l~~~ 274 (324)
....+ ...++|+||+-+-.. ..+.|+.+.. |+++
T Consensus 487 p~~~~-------------~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~ 527 (745)
T 3ua3_A 487 IAKDR-------------GFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPT 527 (745)
T ss_dssp HHHHT-------------TCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTT
T ss_pred ccccC-------------CCCcccEEEEeccccccchhccHHHHHHHHHhCCCC
Confidence 21111 124699999987752 3356666655 5554
No 268
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.38 E-value=2.5e-07 Score=80.42 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=69.6
Q ss_pred HHhhc-cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhh
Q psy16898 156 VTKEV-REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHL 234 (324)
Q Consensus 156 ~~~~~-~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~ 234 (324)
+++.+ .++.+|||+|||+|.++..+++.|.+|+++|+|+.+++.++++. ..++.+|+.++....
T Consensus 25 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~----- 89 (230)
T 3cc8_A 25 LLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPY----- 89 (230)
T ss_dssp HHTTCCTTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCS-----
T ss_pred HHHHhccCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCC-----
Confidence 44444 47889999999999999999998889999999999999886432 257778876421110
Q ss_pred hhhcccCCCCCCCCcccEEEECChh----hhHHHHHHHhc-cchhhcCCCCCCCEEEEEE
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNLPA----TAVEYVRYLKV-LTREEFGKLSRPPVLYLYC 289 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~npP~----~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~ 289 (324)
....||.|+++-.- ....++..+.. ++++ |.+.+..
T Consensus 90 -----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~g--------G~l~~~~ 130 (230)
T 3cc8_A 90 -----------EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQN--------GVILASI 130 (230)
T ss_dssp -----------CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEE--------EEEEEEE
T ss_pred -----------CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCC--------CEEEEEe
Confidence 01359999985321 12456666666 6665 6666544
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.34 E-value=5.2e-07 Score=82.41 Aligned_cols=43 Identities=21% Similarity=0.167 Sum_probs=36.6
Q ss_pred CCCEEEEEcCCCch----hHHHHHhc------CCEEEEEeCCHHHHHHHHHHH
Q psy16898 162 EGDLVLDVFAGVGP----FSIPAARR------GAIVAANDLNPDSYAWLQASI 204 (324)
Q Consensus 162 ~g~~VLDl~~G~G~----~al~~a~~------g~~V~avD~~~~a~~~a~~N~ 204 (324)
++.+|||+|||||. +++.+++. +.+|+|+|+|+.|++.|++++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 45699999999998 77777663 359999999999999999985
No 270
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.34 E-value=5.3e-07 Score=91.06 Aligned_cols=90 Identities=18% Similarity=0.273 Sum_probs=68.9
Q ss_pred CCEEEEEcCCCchh---HHHHHhcC-C--EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 163 GDLVLDVFAGVGPF---SIPAARRG-A--IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 163 g~~VLDl~~G~G~~---al~~a~~g-~--~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
+.+|||+|||+|.+ ++.|++++ . +|+|||.|+.|. .+++..+.|+ +.++|+++++|++++-.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~--~~dkVtVI~gd~eev~L--------- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEE--WGSQVTVVSSDMREWVA--------- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHT--TGGGEEEEESCTTTCCC---------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhcc--CCCeEEEEeCcceeccC---------
Confidence 45899999999999 55555543 3 789999998554 6788899999 99999999999987521
Q ss_pred hcccCCCCCCCCcccEEEECChh------hhHHHHHHHhc-cchh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA------TAVEYVRYLKV-LTRE 274 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~------~a~~~l~~~~~-l~~~ 274 (324)
++++|+||+.+=. +..+.+.+... |+++
T Consensus 426 ----------PEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPg 460 (637)
T 4gqb_A 426 ----------PEKADIIVSELLGSFADNELSPECLDGAQHFLKDD 460 (637)
T ss_dssp ----------SSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEE
T ss_pred ----------CcccCEEEEEcCcccccccCCHHHHHHHHHhcCCC
Confidence 3569999997433 34567777766 7776
No 271
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.32 E-value=9.3e-07 Score=79.84 Aligned_cols=49 Identities=29% Similarity=0.342 Sum_probs=44.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNE 208 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~ 208 (324)
..+|+.|||+|||+|+.++.+++.|.+++|+|+++.+++.+++|++.++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 3589999999999999999999999999999999999999999998776
No 272
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.32 E-value=1.8e-06 Score=79.51 Aligned_cols=47 Identities=34% Similarity=0.396 Sum_probs=44.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLN 207 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n 207 (324)
.+|++|||+|||+|++++.+++.|.+++|+|+++.+++.|++|++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 58899999999999999999999999999999999999999999765
No 273
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.29 E-value=6.6e-06 Score=74.96 Aligned_cols=109 Identities=17% Similarity=0.080 Sum_probs=70.5
Q ss_pred CEEEEEcCCC--chhHHHHHh---cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 164 DLVLDVFAGV--GPFSIPAAR---RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 164 ~~VLDl~~G~--G~~al~~a~---~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
..|||+|||+ +.....+++ .+++|+++|.||.|++.|++++..+. . .+++++++|+.+...-.......
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~-~~~~~v~aD~~~~~~~l~~~~~~--- 153 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--E-GRTAYVEADMLDPASILDAPELR--- 153 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--S-SEEEEEECCTTCHHHHHTCHHHH---
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--C-CcEEEEEecccChhhhhcccccc---
Confidence 6899999998 444455544 46799999999999999998886443 2 37999999998863210000000
Q ss_pred ccCCCCCCCCccc-----EEEEC-----Chhh--hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCCC
Q psy16898 239 QSEGNSTGGTAVA-----RVIMN-----LPAT--AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKMD 295 (324)
Q Consensus 239 ~~~~~~~~~~~fD-----~Vi~n-----pP~~--a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~ 295 (324)
..|| .|++| +|.. ....+..+.. |++ ||++.+..++....
T Consensus 154 ---------~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P--------GG~Lvls~~~~d~~ 206 (277)
T 3giw_A 154 ---------DTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS--------GSYLAMSIGTAEFA 206 (277)
T ss_dssp ---------TTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT--------TCEEEEEEECCTTS
T ss_pred ---------cccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC--------CcEEEEEeccCCCC
Confidence 1133 56676 3332 2456666655 555 48887776766543
No 274
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.29 E-value=8.3e-07 Score=81.66 Aligned_cols=102 Identities=13% Similarity=0.100 Sum_probs=67.6
Q ss_pred ccCCCEEEEEcC------CCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEE-EeccHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA------GVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISA-TQKDARDFLQTDA 230 (324)
Q Consensus 160 ~~~g~~VLDl~~------G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~-~~~D~~~~~~~~~ 230 (324)
+.+|.+|||+|| |+|+ .+.+... +++|+|+|+++. .. ++++ +++|+.+...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~----------v~------~v~~~i~gD~~~~~~--- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF----------VS------DADSTLIGDCATVHT--- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC----------BC------SSSEEEESCGGGCCC---
T ss_pred CCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC----------CC------CCEEEEECccccCCc---
Confidence 568899999999 4577 3333333 469999999997 12 3667 9999876321
Q ss_pred HHhhhhhcccCCCCCCCCcccEEEECChhhh---------------HHHHHHHhc-cchhhcCCCCCCCEEEEEEcccCC
Q psy16898 231 RAHLVRWSQSEGNSTGGTAVARVIMNLPATA---------------VEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a---------------~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~ 294 (324)
...||+|++|++... ...+..+.. |+++ |.+.+..|....
T Consensus 121 ----------------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG--------G~~v~~~~~~~~ 176 (290)
T 2xyq_A 121 ----------------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG--------GSIAVKITEHSW 176 (290)
T ss_dssp ----------------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE--------EEEEEEECSSSC
T ss_pred ----------------cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC--------cEEEEEEeccCC
Confidence 134999999964211 134444444 6665 899988888776
Q ss_pred ChhHHhHhhhc
Q psy16898 295 DLETKKKIKSY 305 (324)
Q Consensus 295 ~~~~~~~v~~y 305 (324)
..+..+..+.+
T Consensus 177 ~~~l~~~l~~~ 187 (290)
T 2xyq_A 177 NADLYKLMGHF 187 (290)
T ss_dssp CHHHHHHHTTE
T ss_pred HHHHHHHHHHc
Confidence 66555555443
No 275
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.23 E-value=9.7e-07 Score=83.09 Aligned_cols=73 Identities=19% Similarity=0.228 Sum_probs=57.6
Q ss_pred CEEEEEcCCCchhHHHHHhcC--C-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 164 DLVLDVFAGVGPFSIPAARRG--A-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~g--~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.+|+|||||+|++++.+.+.| + .|+++|+++.|++..+.|.. +..++++|+.++.......
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~--------~~~~~~~Di~~~~~~~~~~-------- 66 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP--------HTQLLAKTIEGITLEEFDR-------- 66 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECSCGGGCCHHHHHH--------
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc--------ccccccCCHHHccHhHcCc--------
Confidence 479999999999999999988 4 79999999999999888763 2346789998865432221
Q ss_pred CCCCCCCCcccEEEECChh
Q psy16898 241 EGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~ 259 (324)
..+|+|+++||.
T Consensus 67 -------~~~D~l~~gpPC 78 (343)
T 1g55_A 67 -------LSFDMILMSPPC 78 (343)
T ss_dssp -------HCCSEEEECCC-
T ss_pred -------CCcCEEEEcCCC
Confidence 139999999995
No 276
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.20 E-value=3.5e-06 Score=80.31 Aligned_cols=78 Identities=21% Similarity=0.254 Sum_probs=59.1
Q ss_pred CEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCC
Q psy16898 164 DLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEG 242 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 242 (324)
.+|+|||||+|++++.+.+.|. .|.|+|+++.|++..+.|.. +..++++|+.++...........
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~--------~~~~~~~DI~~~~~~~~~~~~~~------ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP--------RSLHVQEDVSLLNAEIIKGFFKN------ 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT--------TSEEECCCGGGCCHHHHHHHHCS------
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC--------CCceEecChhhcCHHHHHhhccc------
Confidence 4799999999999999999998 57799999999998877642 35788999988644322110000
Q ss_pred CCCCCCcccEEEECChh
Q psy16898 243 NSTGGTAVARVIMNLPA 259 (324)
Q Consensus 243 ~~~~~~~fD~Vi~npP~ 259 (324)
...+|+|+.+||.
T Consensus 69 ----~~~~D~i~ggpPC 81 (376)
T 3g7u_A 69 ----DMPIDGIIGGPPC 81 (376)
T ss_dssp ----CCCCCEEEECCCC
T ss_pred ----CCCeeEEEecCCC
Confidence 2359999999993
No 277
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.19 E-value=1e-06 Score=82.62 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=68.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..++++ +.+++++|+ +.++. +++++..+ +.++++++.+|+.+..
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~--~~~~v~~~~~d~~~~~----------- 245 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD--VAGRWKVVEGDFLREV----------- 245 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG--GTTSEEEEECCTTTCC-----------
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC--CCCCeEEEecCCCCCC-----------
Confidence 346789999999999999999984 458999999 44544 44443344 5568999999986211
Q ss_pred cccCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
+ .||+|++. .|.. ...++..+.. |+++ |.+.+..+..
T Consensus 246 ---------p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkpg--------G~l~i~e~~~ 289 (348)
T 3lst_A 246 ---------P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAH--------GRVLVIDAVV 289 (348)
T ss_dssp ---------C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTT--------CEEEEEECCB
T ss_pred ---------C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCC--------CEEEEEEecc
Confidence 1 39999884 3432 2466666665 6654 8887766543
No 278
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.17 E-value=4.2e-06 Score=80.07 Aligned_cols=97 Identities=16% Similarity=0.003 Sum_probs=64.9
Q ss_pred cCCCEEEEEcCC------CchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHH--HH
Q psy16898 161 REGDLVLDVFAG------VGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQ--TD 229 (324)
Q Consensus 161 ~~g~~VLDl~~G------~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~--~~ 229 (324)
.++.+|||+||| +|..++.++++ +++|+|+|+|+.|. .. . .+++++++|+.+... ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~--~-~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VD--E-LRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GC--B-TTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hc--C-CCcEEEEecccccchhhhh
Confidence 467899999999 88888888863 67999999999972 12 2 379999999987432 22
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEECChhh---hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMNLPAT---AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~---a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
... ...||.|++|--.. ...++..+.. |+++ |++.+....
T Consensus 283 ~~~--------------d~sFDlVisdgsH~~~d~~~aL~el~rvLKPG--------GvlVi~Dl~ 326 (419)
T 3sso_A 283 ARR--------------YGPFDIVIDDGSHINAHVRTSFAALFPHVRPG--------GLYVIEDMW 326 (419)
T ss_dssp HHH--------------HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEE--------EEEEEECGG
T ss_pred hcc--------------cCCccEEEECCcccchhHHHHHHHHHHhcCCC--------eEEEEEecc
Confidence 110 03599999984321 1233444433 6654 777775443
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.13 E-value=1.9e-06 Score=70.90 Aligned_cols=71 Identities=17% Similarity=0.088 Sum_probs=53.4
Q ss_pred HHhhccCCCEEEEEcCCCc-hhHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHh
Q psy16898 156 VTKEVREGDLVLDVFAGVG-PFSIPAAR-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAH 233 (324)
Q Consensus 156 ~~~~~~~g~~VLDl~~G~G-~~al~~a~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~ 233 (324)
+.+...++.+|||+|||.| ..|..+++ .|..|+|+|+||.|++ +++.|+++-..+..
T Consensus 29 I~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~------------------~v~dDiF~P~~~~Y--- 87 (153)
T 2k4m_A 29 IIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG------------------IVRDDITSPRMEIY--- 87 (153)
T ss_dssp HHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT------------------EECCCSSSCCHHHH---
T ss_pred HHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc------------------eEEccCCCCccccc---
Confidence 3445666789999999999 59999997 8999999999996544 56667765322211
Q ss_pred hhhhcccCCCCCCCCcccEE-EECChhhh
Q psy16898 234 LVRWSQSEGNSTGGTAVARV-IMNLPATA 261 (324)
Q Consensus 234 ~~~~~~~~~~~~~~~~fD~V-i~npP~~a 261 (324)
..||.| -.|||.--
T Consensus 88 --------------~~~DLIYsirPP~El 102 (153)
T 2k4m_A 88 --------------RGAALIYSIRPPAEI 102 (153)
T ss_dssp --------------TTEEEEEEESCCTTT
T ss_pred --------------CCcCEEEEcCCCHHH
Confidence 139999 88998843
No 280
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.08 E-value=3.9e-06 Score=78.77 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=68.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++ .+ +++++.+|+.+- .
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~-~v~~~~~d~~~~---~-------- 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG--------SN-NLTYVGGDMFTS---I-------- 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------BT-TEEEEECCTTTC---C--------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc--------CC-CcEEEeccccCC---C--------
Confidence 456789999999999999999985 569999999 999887653 22 599999998641 0
Q ss_pred cccCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
..||.|++. .|. ....++..+.. |++.. +||.+.+..+..
T Consensus 245 ----------p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~-----~gG~l~i~e~~~ 291 (352)
T 1fp2_A 245 ----------PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDG-----KRGKVTIIDMVI 291 (352)
T ss_dssp ----------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGG-----CCCEEEEEECEE
T ss_pred ----------CCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCC-----CCcEEEEEEeec
Confidence 129999884 333 12356666665 77610 037777665544
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.07 E-value=2.8e-05 Score=73.77 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCCchhHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHH-hCCCCC----CCeEEEeccHHHHHHHHHHHhhh
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRG-AIVAANDLNPDSYAWLQASIRL-NERQVK----TPISATQKDARDFLQTDARAHLV 235 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g-~~V~avD~~~~a~~~a~~N~~~-n~~~l~----~~v~~~~~D~~~~~~~~~~~~~~ 235 (324)
+.++||=+|.|.|..+..+++.. .+|+.||++|..++.+++-+.. ++..++ ++++++.+|+++++++....
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~--- 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE--- 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH---
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc---
Confidence 56899999999999999999844 4999999999999999986421 110011 36899999999999875442
Q ss_pred hhcccCCCCCCCCcccEEEECChh--------------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 236 RWSQSEGNSTGGTAVARVIMNLPA--------------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 236 ~~~~~~~~~~~~~~fD~Vi~npP~--------------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
..+||+||+|+++ ...+|.+..+. |+++ |++...+-+..
T Consensus 282 -----------~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~--------GVlv~Q~~s~~ 335 (381)
T 3c6k_A 282 -----------GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD--------GKYFTQGNCVN 335 (381)
T ss_dssp -----------TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE--------EEEEEEEEETT
T ss_pred -----------cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCC--------CEEEEecCCCc
Confidence 2469999999643 12356666655 7765 77766544443
No 282
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.06 E-value=9.6e-06 Score=76.37 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=72.8
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.+..+|+|+|||+|.+++.++++ +.+++..|+ |.+++.|++++...+ .++++++.+|.++-.
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~----------- 241 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDP----------- 241 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSC-----------
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCC-----------
Confidence 346779999999999999999984 558888897 889999998886544 358999999976411
Q ss_pred cccCCCCCCCCcccEEEE-----CChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 238 SQSEGNSTGGTAVARVIM-----NLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~-----npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
...+|+|++ |-|+ ....+|..+.. ++++ |.+.+..+.
T Consensus 242 ---------~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pg--------g~lli~e~~ 285 (353)
T 4a6d_A 242 ---------LPEADLYILARVLHDWADGKCSHLLERIYHTCKPG--------GGILVIESL 285 (353)
T ss_dssp ---------CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTT--------CEEEEEECC
T ss_pred ---------CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCC--------CEEEEEEee
Confidence 123798887 3443 35667777766 7765 666655443
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.02 E-value=2.1e-05 Score=72.30 Aligned_cols=108 Identities=10% Similarity=0.091 Sum_probs=82.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc-C-CEEEEEeCCHHHHHHHHHHHHH-hCCCC-CCCeEEEeccHHHHHHHHHHHhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR-G-AIVAANDLNPDSYAWLQASIRL-NERQV-KTPISATQKDARDFLQTDARAHLVR 236 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~-g-~~V~avD~~~~a~~~a~~N~~~-n~~~l-~~~v~~~~~D~~~~~~~~~~~~~~~ 236 (324)
...++||=+|.|.|+.+..+++. + .+|+.||+++..++.+++-+.. ++..+ +.+++++.+|++.++...
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~------- 154 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT------- 154 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-------
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-------
Confidence 46679999999999999999984 3 5999999999999999987632 22002 248999999999987642
Q ss_pred hcccCCCCCCCCcccEEEECChh--------hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEcccC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPA--------TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLPK 293 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~--------~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~~ 293 (324)
..+||+||+|+++ .+.+|.+.++. |+++ |++.+.+-++.
T Consensus 155 ----------~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~--------Gv~v~q~~sp~ 202 (294)
T 3o4f_A 155 ----------SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG--------GIFVAQNGVCF 202 (294)
T ss_dssp ----------SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEE--------EEEEEEEEESS
T ss_pred ----------cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCC--------CEEEEecCCcc
Confidence 2469999999765 24578888877 8876 77776654443
No 284
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.98 E-value=3.6e-06 Score=72.79 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=60.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
..++.+|||+|||+|.++..++ .+|+|+|+++. + +.++.+|+.+....
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~------------~------~~~~~~d~~~~~~~----------- 112 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR---NPVHCFDLASL------------D------PRVTVCDMAQVPLE----------- 112 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS------------S------TTEEESCTTSCSCC-----------
T ss_pred cCCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC------------C------ceEEEeccccCCCC-----------
Confidence 4577899999999999998873 68999999987 3 34667787652110
Q ss_pred cCCCCCCCCcccEEEECCh---hhhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 240 SEGNSTGGTAVARVIMNLP---ATAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP---~~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
...||.|+++.. .....++..+.. |+++ |.+.+..+..
T Consensus 113 -------~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~g--------G~l~i~~~~~ 154 (215)
T 2zfu_A 113 -------DESVDVAVFCLSLMGTNIRDFLEEANRVLKPG--------GLLKVAEVSS 154 (215)
T ss_dssp -------TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEE--------EEEEEEECGG
T ss_pred -------CCCEeEEEEehhccccCHHHHHHHHHHhCCCC--------eEEEEEEcCC
Confidence 235999998643 123456666655 7765 7777766554
No 285
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.98 E-value=7.1e-06 Score=76.69 Aligned_cols=71 Identities=20% Similarity=0.269 Sum_probs=56.9
Q ss_pred CCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 163 GDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
+.+|+|||||+|++++.+.+.|. .|.++|+++.|++..+.|.. . . . ++|+.++....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~--~--~---~---~~Di~~~~~~~------------ 68 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG--E--K---P---EGDITQVNEKT------------ 68 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS--C--C---C---BSCGGGSCGGG------------
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC--C--C---C---cCCHHHcCHhh------------
Confidence 56899999999999999999998 78899999999999998863 2 1 1 68887754321
Q ss_pred CCCCCCCcccEEEECChhh
Q psy16898 242 GNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP~~ 260 (324)
...+|+|+.+||..
T Consensus 69 -----~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 69 -----IPDHDILCAGFPCQ 82 (327)
T ss_dssp -----SCCCSEEEEECCCT
T ss_pred -----CCCCCEEEECCCCC
Confidence 12389999999983
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.98 E-value=6e-06 Score=78.08 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=55.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+.+|.+||||||++|+++..++++|++|+|||..+-. ..+. . .+ +|+++.+|++.+...
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~-----~~l~--~--~~-~V~~~~~d~~~~~~~----------- 267 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMA-----QSLM--D--TG-QVTWLREDGFKFRPT----------- 267 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCC-----HHHH--T--TT-CEEEECSCTTTCCCC-----------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcC-----hhhc--c--CC-CeEEEeCccccccCC-----------
Confidence 5689999999999999999999999999999986521 1122 2 22 799999998865322
Q ss_pred cCCCCCCCCcccEEEECChh
Q psy16898 240 SEGNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~npP~ 259 (324)
...+|.|++|.-.
T Consensus 268 -------~~~~D~vvsDm~~ 280 (375)
T 4auk_A 268 -------RSNISWMVCDMVE 280 (375)
T ss_dssp -------SSCEEEEEECCSS
T ss_pred -------CCCcCEEEEcCCC
Confidence 2359999999633
No 287
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.94 E-value=1.1e-05 Score=76.44 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=66.6
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++ . .+++++.+|+.+- .
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~-~~v~~~~~d~~~~---~--------- 259 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA--------F-SGVEHLGGDMFDG---V--------- 259 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------C-TTEEEEECCTTTC---C---------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh--------c-CCCEEEecCCCCC---C---------
Confidence 45789999999999999999984 569999999 888876642 2 2799999998751 0
Q ss_pred ccCCCCCCCCcccEEEEC-----Chh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIMN-----LPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~n-----pP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
+. .|.|++. .|. ....++..+.. |+++ |.+.+..+..
T Consensus 260 --------p~-~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pg--------G~l~i~e~~~ 303 (368)
T 3reo_A 260 --------PK-GDAIFIKWICHDWSDEHCLKLLKNCYAALPDH--------GKVIVAEYIL 303 (368)
T ss_dssp --------CC-CSEEEEESCGGGBCHHHHHHHHHHHHHHSCTT--------CEEEEEECCC
T ss_pred --------CC-CCEEEEechhhcCCHHHHHHHHHHHHHHcCCC--------CEEEEEEecc
Confidence 11 3888873 232 23456666665 6664 8777766553
No 288
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.90 E-value=1.1e-05 Score=76.16 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=67.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++ .+ +++++.+|+.+ . .
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~--------~~-~v~~~~~d~~~--~-~-------- 265 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP--------LS-GIEHVGGDMFA--S-V-------- 265 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------CT-TEEEEECCTTT--C-C--------
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh--------cC-CCEEEeCCccc--C-C--------
Confidence 346789999999999999999985 358999999 998877653 22 69999999875 1 0
Q ss_pred cccCCCCCCCCcccEEEEC-----Chhh-hHHHHHHHhc-cchhhcCCCCCCCEEEEEEcc
Q psy16898 238 SQSEGNSTGGTAVARVIMN-----LPAT-AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~n-----pP~~-a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~ 291 (324)
+ .||+|++. .|.. ...++..+.. |+++ |.+.+..+.
T Consensus 266 ---------~-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pg--------G~l~i~e~~ 308 (372)
T 1fp1_D 266 ---------P-QGDAMILKAVCHNWSDEKCIEFLSNCHKALSPN--------GKVIIVEFI 308 (372)
T ss_dssp ---------C-CEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEE--------EEEEEEEEE
T ss_pred ---------C-CCCEEEEecccccCCHHHHHHHHHHHHHhcCCC--------CEEEEEEec
Confidence 1 28999885 2332 2367777766 7775 776665443
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.88 E-value=8.5e-06 Score=73.59 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--------------CCEEEEEeCCH---HHHH-----------HHHHHHHHhCC----
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--------------GAIVAANDLNP---DSYA-----------WLQASIRLNER---- 209 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--------------g~~V~avD~~~---~a~~-----------~a~~N~~~n~~---- 209 (324)
++.+|||+|+|+|..++.+++. ..+++++|..| +.+. .++++++.-..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4469999999999988776542 13899999887 3333 66666653100
Q ss_pred ----CCC---CCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECC--hhh-----hHHHHHHHhc-cchh
Q psy16898 210 ----QVK---TPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNL--PAT-----AVEYVRYLKV-LTRE 274 (324)
Q Consensus 210 ----~l~---~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~np--P~~-----a~~~l~~~~~-l~~~ 274 (324)
.+. .+++++.+|+.+.+....... ...||.|++|+ |.. ..++++.+.. ++++
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~-------------~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pG 206 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSL-------------NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPG 206 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGG-------------TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccccc-------------CCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCC
Confidence 011 268899999999876531100 02499999997 432 3467777766 7775
Q ss_pred hcCCCCCCCEEEEEEcc
Q psy16898 275 EFGKLSRPPVLYLYCFL 291 (324)
Q Consensus 275 ~~~~~~~~g~vh~y~f~ 291 (324)
|++..|+-.
T Consensus 207 --------G~l~tysaa 215 (257)
T 2qy6_A 207 --------GTLATFTSA 215 (257)
T ss_dssp --------EEEEESCCB
T ss_pred --------cEEEEEeCC
Confidence 888877754
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.85 E-value=3.5e-05 Score=71.82 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=78.1
Q ss_pred cCcChHHHHHHHhhccCCCEEEEEcCCCchhHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccH
Q psy16898 146 NSRLSTEHERVTKEVREGDLVLDVFAGVGPFSIPAARR---GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDA 222 (324)
Q Consensus 146 ~~r~~~e~~~~~~~~~~g~~VLDl~~G~G~~al~~a~~---g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~ 222 (324)
.|-+..|....+. +.+|++++|..||.|+.+..++++ ..+|+|+|.++.|++.++ ++ . .+++++++++.
T Consensus 42 ~pVLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~---~~Rv~lv~~nF 113 (347)
T 3tka_A 42 TTVLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---D---DPRFSIIHGPF 113 (347)
T ss_dssp CCTTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---C---CTTEEEEESCG
T ss_pred ccccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---c---CCcEEEEeCCH
Confidence 3445555433322 468999999999999999999985 359999999999999884 33 2 24799999999
Q ss_pred HHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhhhHHHHHHHhc
Q psy16898 223 RDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPATAVEYVRYLKV 270 (324)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~a~~~l~~~~~ 270 (324)
.++........+ ...+|.|++|+..++.++=+.-++
T Consensus 114 ~~l~~~L~~~g~------------~~~vDgILfDLGVSS~QlD~~eRG 149 (347)
T 3tka_A 114 SALGEYVAERDL------------IGKIDGILLDLGVSSPQLDDAERG 149 (347)
T ss_dssp GGHHHHHHHTTC------------TTCEEEEEEECSCCHHHHHCGGGC
T ss_pred HHHHHHHHhcCC------------CCcccEEEECCccCHHHhcCCCCC
Confidence 887654432110 014999999999988888777787
No 291
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.84 E-value=4.4e-05 Score=72.00 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFL 226 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~ 226 (324)
++.|||+|.|.|.++..++.+ +++|+++|+++..+..+++.. . . ++++++++|+.++-
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~----~-~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E----G-SPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T----T-SSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c----C-CCEEEEECCccchh
Confidence 589999999999999999985 569999999999999998876 2 2 27999999997763
No 292
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.80 E-value=2.6e-05 Score=73.72 Aligned_cols=94 Identities=14% Similarity=0.086 Sum_probs=67.4
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR--RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~--~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||+|||+|.++..+++ .+.+++++|+ |.+++.+++ . .+++++.+|+.+ ..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~-~~v~~~~~D~~~--~~--------- 257 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ--------F-PGVTHVGGDMFK--EV--------- 257 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------C-TTEEEEECCTTT--CC---------
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh--------c-CCeEEEeCCcCC--CC---------
Confidence 34678999999999999999998 4569999999 888776542 2 279999999875 11
Q ss_pred cccCCCCCCCCcccEEEE-----CChh-hhHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 238 SQSEGNSTGGTAVARVIM-----NLPA-TAVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~-----npP~-~a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
+. -|.|++ +.|. ....++..+.. |+++ |.+.+..+..
T Consensus 258 ---------p~-~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pg--------G~l~i~e~~~ 301 (364)
T 3p9c_A 258 ---------PS-GDTILMKWILHDWSDQHCATLLKNCYDALPAH--------GKVVLVQCIL 301 (364)
T ss_dssp ---------CC-CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT--------CEEEEEECCB
T ss_pred ---------CC-CCEEEehHHhccCCHHHHHHHHHHHHHHcCCC--------CEEEEEEecc
Confidence 11 288887 3333 24456666665 6664 8887776654
No 293
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.79 E-value=2.5e-05 Score=73.38 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=67.1
Q ss_pred cCCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.++.+|||+|||+|.++..++++ +.+++++|+ +.+++.+++ .+ +++++.+|+.+ . .
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~-~v~~~~~d~~~--~-~--------- 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG--------NE-NLNFVGGDMFK--S-I--------- 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC--------CS-SEEEEECCTTT--C-C---------
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc--------CC-CcEEEeCccCC--C-C---------
Confidence 46789999999999999999985 459999999 788876542 33 59999999875 1 0
Q ss_pred ccCCCCCCCCcccEEEECC-----hh-hhHHHHHHHhc-cch---hhcCCCCCCCEEEEEEccc
Q psy16898 239 QSEGNSTGGTAVARVIMNL-----PA-TAVEYVRYLKV-LTR---EEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~np-----P~-~a~~~l~~~~~-l~~---~~~~~~~~~g~vh~y~f~~ 292 (324)
..||+|++.- |. ....++..+.. |++ + |.+.+..+..
T Consensus 250 ---------~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~g--------G~l~i~e~~~ 296 (358)
T 1zg3_A 250 ---------PSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKD--------GKVIIIDISI 296 (358)
T ss_dssp ---------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGG--------CEEEEEECEE
T ss_pred ---------CCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCC--------cEEEEEEecc
Confidence 1399999852 22 13366776666 776 5 7777665543
No 294
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.77 E-value=5.8e-05 Score=69.46 Aligned_cols=78 Identities=19% Similarity=0.112 Sum_probs=59.7
Q ss_pred cCCCEEEEEcCCCchhHHHHHhcCCE---EEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 161 REGDLVLDVFAGVGPFSIPAARRGAI---VAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~~g~~---V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
..+-+|+|||||.|++++.+.+.|.+ |.++|+++.|.+..+.|.. ...++++|+.++......+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~--------~~~~~~~DI~~i~~~~i~~----- 80 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ--------GKIMYVGDVRSVTQKHIQE----- 80 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT--------TCEEEECCGGGCCHHHHHH-----
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC--------CCceeCCChHHccHHHhcc-----
Confidence 34568999999999999999998873 6999999999988776531 2467889998875543321
Q ss_pred cccCCCCCCCCcccEEEECChhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...+|+++..||..
T Consensus 81 ---------~~~~Dll~ggpPCQ 94 (295)
T 2qrv_A 81 ---------WGPFDLVIGGSPCN 94 (295)
T ss_dssp ---------TCCCSEEEECCCCG
T ss_pred ---------cCCcCEEEecCCCc
Confidence 12489999999884
No 295
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.75 E-value=1.2e-05 Score=74.90 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=50.7
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
..+|+.|||.|||+|+.++.+.+.|.+.+|+|+++.+++.++++++..+ .. ...++.|+.++
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~--~~--~~~~~~~~~~i 311 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN--IS--EEKITDIYNRI 311 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC--SC--HHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc--cc--hHHHHHHHHHH
Confidence 4589999999999999999999999999999999999999999887555 32 44444555443
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.65 E-value=4.7e-06 Score=75.52 Aligned_cols=122 Identities=12% Similarity=0.052 Sum_probs=68.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhc-CC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARR-GA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~-g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.++.+|||||||+|.++..++++ ++ .|.|+|+.-+....... ... ...++..+..++... .
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~---~~~--~g~~ii~~~~~~dv~--~--------- 135 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN---VQS--LGWNIITFKDKTDIH--R--------- 135 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC---CCB--TTGGGEEEECSCCTT--T---------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc---cCc--CCCCeEEEeccceeh--h---------
Confidence 568889999999999999998875 55 78888887432100000 000 001344445543110 0
Q ss_pred cccCCCCCCCCcccEEEECC-hhhhHHHHHHHhc--cchhhcCCCCCC-CEEEEEEccc--CCChhHHhHhhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNL-PATAVEYVRYLKV--LTREEFGKLSRP-PVLYLYCFLP--KMDLETKKKIKS 304 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~np-P~~a~~~l~~~~~--l~~~~~~~~~~~-g~vh~y~f~~--~~~~~~~~~v~~ 304 (324)
-.+..||.|++|. |.......+.++. |-......++++ |.+.+-.|.+ .+..+..+.++.
T Consensus 136 -------l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~ 201 (277)
T 3evf_A 136 -------LEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQR 201 (277)
T ss_dssp -------SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHH
T ss_pred -------cCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHH
Confidence 0134599999996 4433334444432 111111234567 9999999994 444445544443
No 297
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.60 E-value=7.1e-05 Score=70.04 Aligned_cols=72 Identities=18% Similarity=0.328 Sum_probs=55.9
Q ss_pred EEEEEcCCCchhHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 165 LVLDVFAGVGPFSIPAARRGA---IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 165 ~VLDl~~G~G~~al~~a~~g~---~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
+++|||||.|++++.+.+.|. .|.|+|+++.|.+..+.|.. ...++++|+.++.......
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~--------~~~~~~~DI~~~~~~~~~~--------- 67 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP--------ETNLLNRNIQQLTPQVIKK--------- 67 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECCCGGGCCHHHHHH---------
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC--------CCceeccccccCCHHHhcc---------
Confidence 799999999999999988774 57899999999988877652 2346788988765443321
Q ss_pred CCCCCCCcccEEEECChh
Q psy16898 242 GNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP~ 259 (324)
..+|+++..||.
T Consensus 68 ------~~~D~l~ggpPC 79 (333)
T 4h0n_A 68 ------WNVDTILMSPPC 79 (333)
T ss_dssp ------TTCCEEEECCCC
T ss_pred ------CCCCEEEecCCC
Confidence 138999999997
No 298
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.58 E-value=5e-05 Score=70.40 Aligned_cols=70 Identities=14% Similarity=0.275 Sum_probs=55.3
Q ss_pred EEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCC
Q psy16898 165 LVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGN 243 (324)
Q Consensus 165 ~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 243 (324)
+|+|||||.|++++-+-+.|. -|.|+|+++.|.+..+.|. + -.++++|+.++....
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~---~------~~~~~~DI~~i~~~~-------------- 58 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH---S------AKLIKGDISKISSDE-------------- 58 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC---C------SEEEESCGGGCCGGG--------------
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC---C------CCcccCChhhCCHhh--------------
Confidence 699999999999999988888 6789999999988877653 1 357889988753321
Q ss_pred CCCCCcccEEEECChhh
Q psy16898 244 STGGTAVARVIMNLPAT 260 (324)
Q Consensus 244 ~~~~~~fD~Vi~npP~~ 260 (324)
...+|+++.-||..
T Consensus 59 ---~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 59 ---FPKCDGIIGGPPSQ 72 (331)
T ss_dssp ---SCCCSEEECCCCGG
T ss_pred ---CCcccEEEecCCCC
Confidence 12489999999973
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.58 E-value=0.00011 Score=68.58 Aligned_cols=74 Identities=15% Similarity=0.199 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCchhHHHHHhcC--C-EE-EEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 163 GDLVLDVFAGVGPFSIPAARRG--A-IV-AANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~g--~-~V-~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.-+++|||||.|++++.+.+.| . .| .|+|+++.|.+..+.|.. . . ++++|+.++..+....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~--~-----~--~~~~DI~~~~~~~i~~------ 74 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK--E-----E--VQVKNLDSISIKQIES------ 74 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC--C-----C--CBCCCTTTCCHHHHHH------
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC--C-----C--cccCChhhcCHHHhcc------
Confidence 4489999999999999999987 3 56 799999999999888763 1 1 4567877654432221
Q ss_pred ccCCCCCCCCcccEEEECChhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
..+|++++.||..
T Consensus 75 ---------~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 75 ---------LNCNTWFMSPPCQ 87 (327)
T ss_dssp ---------TCCCEEEECCCCT
T ss_pred ---------CCCCEEEecCCcc
Confidence 1389999999963
No 300
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.56 E-value=2.1e-06 Score=77.92 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=31.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCC-EEEEEeCCHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGA-IVAANDLNPD 195 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~-~V~avD~~~~ 195 (324)
+.++.+|||||||.|.|+..+++ .++ .|+|+|+...
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC
Confidence 67888999999999999999986 455 8999999865
No 301
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.56 E-value=0.00012 Score=71.86 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=48.2
Q ss_pred CCEEEEEcCCCchhHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAARRGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFL 226 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~ 226 (324)
.-+++|||||+|++++.+.+.|. .|.++|+++.|.+..+.|.... + ...++++|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~----p-~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD----P-ATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC----T-TTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC----C-Ccceeccchhhhh
Confidence 34899999999999999998887 5899999999999888775311 2 3457789999876
No 302
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.48 E-value=3.6e-05 Score=68.95 Aligned_cols=111 Identities=15% Similarity=0.068 Sum_probs=64.0
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc--C----CEEEEEe--CCHHHHHHHHHHHHHhCCCCCCCeEEEec-cHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR--G----AIVAAND--LNPDSYAWLQASIRLNERQVKTPISATQK-DARDFLQTD 229 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~--g----~~V~avD--~~~~a~~~a~~N~~~n~~~l~~~v~~~~~-D~~~~~~~~ 229 (324)
.+++|.+|+||||+.|+++..++++ . ..|+|+| +.|-... -.+ +. -+++..+ |+++..
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~G--v~-~i~~~~G~Df~~~~--- 136 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYG--WN-IVTMKSGVDVFYKP--- 136 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STT--GG-GEEEECSCCGGGSC---
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCC--ce-EEEeeccCCccCCC---
Confidence 4789999999999999999999986 2 2455666 2221000 001 11 2355557 988611
Q ss_pred HHHhhhhhcccCCCCCCCCcccEEEECC-hhhhHHHHHHHhccchhh--cCCCCCCC-EEEEEEcccCCChhHHh
Q psy16898 230 ARAHLVRWSQSEGNSTGGTAVARVIMNL-PATAVEYVRYLKVLTREE--FGKLSRPP-VLYLYCFLPKMDLETKK 300 (324)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~fD~Vi~np-P~~a~~~l~~~~~l~~~~--~~~~~~~g-~vh~y~f~~~~~~~~~~ 300 (324)
+..+|+|++|. |.+.....+..+.+.-.. ...++++| .+.|-.|.+ ..+++.+
T Consensus 137 -----------------~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg-~~~~~~~ 193 (269)
T 2px2_A 137 -----------------SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP-YMPKVIE 193 (269)
T ss_dssp -----------------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT-TSHHHHH
T ss_pred -----------------CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC-CchHHHH
Confidence 23599999996 443333333333211100 11234567 999999994 3344433
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.48 E-value=0.00022 Score=63.11 Aligned_cols=110 Identities=12% Similarity=0.048 Sum_probs=67.5
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEec-cHHHHHHHHHHHhhhh
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGA-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQK-DARDFLQTDARAHLVR 236 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~-D~~~~~~~~~~~~~~~ 236 (324)
+.++.+|+||||++|+++..++. .|+ +|+|+|+-+.--+.-+ ..+..| - +.++|..+ |++...
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~g--w-n~v~fk~gvDv~~~~---------- 141 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYG--W-NIVKLMSGKDVFYLP---------- 141 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTT--T-TSEEEECSCCGGGCC----------
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcC--c-CceEEEeccceeecC----------
Confidence 67889999999999999998887 566 8999999763211000 000011 1 36899999 984321
Q ss_pred hcccCCCCCCCCcccEEEECC-hhhhHHHHHHHhccchhhc--CCCCCCCEEEEEEcccCC
Q psy16898 237 WSQSEGNSTGGTAVARVIMNL-PATAVEYVRYLKVLTREEF--GKLSRPPVLYLYCFLPKM 294 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~np-P~~a~~~l~~~~~l~~~~~--~~~~~~g~vh~y~f~~~~ 294 (324)
...+|.|++|. |.++....++.+.++-..+ .-++. +-+.|--|++..
T Consensus 142 ----------~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 142 ----------PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp ----------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ----------CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 23499999997 3333334444433322210 11223 677788888876
No 304
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.45 E-value=0.00028 Score=67.73 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=48.4
Q ss_pred cCCCEEEEEcCCCchhHHHHH-hc-C--CEEEEEeCCHHHHHHHHHHHHH--hCCCCCCCeEEEec
Q psy16898 161 REGDLVLDVFAGVGPFSIPAA-RR-G--AIVAANDLNPDSYAWLQASIRL--NERQVKTPISATQK 220 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a-~~-g--~~V~avD~~~~a~~~a~~N~~~--n~~~l~~~v~~~~~ 220 (324)
.++.+|+|+||++|.+++.++ +. + ++|+|+|.+|.+++.+++|++. |+. .+.++++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~-~~~~v~~~~~ 289 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTN-FASRITVHGC 289 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTST-TGGGEEEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccC-CCCCEEEEEe
Confidence 588999999999999999988 42 2 5999999999999999999998 530 4136776654
No 305
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.39 E-value=0.00018 Score=66.91 Aligned_cols=54 Identities=26% Similarity=0.364 Sum_probs=44.5
Q ss_pred HHHhh-ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCH---HHHHHHHHHHHHhC
Q psy16898 155 RVTKE-VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNP---DSYAWLQASIRLNE 208 (324)
Q Consensus 155 ~~~~~-~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~---~a~~~a~~N~~~n~ 208 (324)
+++.. -.+|+.|||.|||+|+.++.+.+.|.+.+|+|+++ ..++.++++++..+
T Consensus 234 ~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 234 RLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34443 45899999999999999999999999999999999 99999999887554
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.27 E-value=1.9e-05 Score=72.15 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=69.0
Q ss_pred hccCCCEEEEEcCCCchhHHHHHhc-CC-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCe-EEEec-cHHHHHHHHHHHhh
Q psy16898 159 EVREGDLVLDVFAGVGPFSIPAARR-GA-IVAANDLNPDSYAWLQASIRLNERQVKTPI-SATQK-DARDFLQTDARAHL 234 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~G~~al~~a~~-g~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v-~~~~~-D~~~~~~~~~~~~~ 234 (324)
.+.+|.+||||||++|+|+..++++ ++ .|+|+|+...+...... ... ...++ .+..+ |+..+
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~---~~~--~~~~iv~~~~~~di~~l--------- 143 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH---MQT--LGWNIVKFKDKSNVFTM--------- 143 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC---CCB--TTGGGEEEECSCCTTTS---------
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc---ccc--cCCceEEeecCceeeec---------
Confidence 4668999999999999999999974 55 89999997532100000 000 01112 22211 32211
Q ss_pred hhhcccCCCCCCCCcccEEEECC-hhhhHHHHHHHhc--cchhhcCCCCCC-CEEEEEEcc--cCCChhHHhHhh
Q psy16898 235 VRWSQSEGNSTGGTAVARVIMNL-PATAVEYVRYLKV--LTREEFGKLSRP-PVLYLYCFL--PKMDLETKKKIK 303 (324)
Q Consensus 235 ~~~~~~~~~~~~~~~fD~Vi~np-P~~a~~~l~~~~~--l~~~~~~~~~~~-g~vh~y~f~--~~~~~~~~~~v~ 303 (324)
.+..+|.|++|. |......++.++. |-......+++| |.|.|-.|. ..+..+..+.++
T Consensus 144 -----------~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk 207 (300)
T 3eld_A 144 -----------PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQ 207 (300)
T ss_dssp -----------CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHH
T ss_pred -----------CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHH
Confidence 124599999996 4433444555433 211112235677 999999999 444445555443
No 307
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.17 E-value=0.0014 Score=59.74 Aligned_cols=103 Identities=12% Similarity=-0.057 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCCchhHHHHHhc-------CCEEEEEeCCH--------------------------HHHHHHHHHHHHhC
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR-------GAIVAANDLNP--------------------------DSYAWLQASIRLNE 208 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~-------g~~V~avD~~~--------------------------~a~~~a~~N~~~n~ 208 (324)
..+.||++|+..|.-++.+|.. +.+|+++|..+ ..++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3569999999999999888751 56899999642 14678999999998
Q ss_pred CCCC-CCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh--hHHHHHHHhc-cchhhcCCCCCCCE
Q psy16898 209 RQVK-TPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT--AVEYVRYLKV-LTREEFGKLSRPPV 284 (324)
Q Consensus 209 ~~l~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~--a~~~l~~~~~-l~~~~~~~~~~~g~ 284 (324)
+. ++++++.||+.+.+.... ...||.|.+|--.. ...+++.+.. ++++ |+
T Consensus 186 --l~~~~I~li~Gda~etL~~~~----------------~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pG--------Gi 239 (282)
T 2wk1_A 186 --LLDEQVRFLPGWFKDTLPTAP----------------IDTLAVLRMDGDLYESTWDTLTNLYPKVSVG--------GY 239 (282)
T ss_dssp --CCSTTEEEEESCHHHHSTTCC----------------CCCEEEEEECCCSHHHHHHHHHHHGGGEEEE--------EE
T ss_pred --CCcCceEEEEeCHHHHHhhCC----------------CCCEEEEEEcCCccccHHHHHHHHHhhcCCC--------EE
Confidence 83 699999999988766421 23599999996431 2456666655 5554 88
Q ss_pred EEEEEc
Q psy16898 285 LYLYCF 290 (324)
Q Consensus 285 vh~y~f 290 (324)
|.+..+
T Consensus 240 Iv~DD~ 245 (282)
T 2wk1_A 240 VIVDDY 245 (282)
T ss_dssp EEESSC
T ss_pred EEEcCC
Confidence 877766
No 308
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.01 E-value=0.00035 Score=58.23 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=55.1
Q ss_pred ccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcc
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQ 239 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 239 (324)
+++|.+|||++||. +++|+|+.|++.|+++.. .++++.++|+.++.....
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~--------- 59 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAH--------- 59 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCC---------
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccC---------
Confidence 67899999999996 239999999999987642 147899999886532100
Q ss_pred cCCCCCCCCcccEEEECC------hhhhHHHHHHHhc-cchh
Q psy16898 240 SEGNSTGGTAVARVIMNL------PATAVEYVRYLKV-LTRE 274 (324)
Q Consensus 240 ~~~~~~~~~~fD~Vi~np------P~~a~~~l~~~~~-l~~~ 274 (324)
....||.|+++. |. ...++..+.. |+++
T Consensus 60 ------~~~~fD~V~~~~~l~~~~~~-~~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 60 ------KESSFDIILSGLVPGSTTLH-SAEILAEIARILRPG 94 (176)
T ss_dssp ------CSSCEEEEEECCSTTCCCCC-CHHHHHHHHHHEEEE
T ss_pred ------CCCCEeEEEECChhhhcccC-HHHHHHHHHHHCCCC
Confidence 024599999952 33 3456666655 8876
No 309
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.77 E-value=0.0055 Score=64.91 Aligned_cols=86 Identities=15% Similarity=0.087 Sum_probs=59.5
Q ss_pred CEEEEEcCCCchhHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccC
Q psy16898 164 DLVLDVFAGVGPFSIPAARRGA--IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSE 241 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~g~--~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 241 (324)
-+++|||||.|++++-+.+.|. .|.|+|+++.|.+..+.| . + ...++++|+.++........+......
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N----~---p-~~~~~~~DI~~l~~~~~~~di~~~~~~- 611 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN----N---P-GSTVFTEDCNILLKLVMAGETTNSRGQ- 611 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH----C---T-TSEEECSCHHHHHHHHHHTCSBCTTCC-
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh----C---C-CCccccccHHHHhhhccchhhhhhhhh-
Confidence 3899999999999999998886 578999999998887665 2 2 367889999887654322211110000
Q ss_pred CCCCCCCcccEEEECChh
Q psy16898 242 GNSTGGTAVARVIMNLPA 259 (324)
Q Consensus 242 ~~~~~~~~fD~Vi~npP~ 259 (324)
.-.....+|+|+.-||.
T Consensus 612 -~lp~~~~vDll~GGpPC 628 (1002)
T 3swr_A 612 -RLPQKGDVEMLCGGPPC 628 (1002)
T ss_dssp -BCCCTTTCSEEEECCCC
T ss_pred -hcccCCCeeEEEEcCCC
Confidence 00012358999999996
No 310
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.63 E-value=0.0033 Score=65.08 Aligned_cols=58 Identities=21% Similarity=0.226 Sum_probs=45.7
Q ss_pred CEEEEEcCCCchhHHHHHhcC------C-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAARRG------A-IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTD 229 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~g------~-~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~ 229 (324)
.+|+|||||.|++++-+.+.| . -+.|+|+++.|++..+.| . + ...+++.|+.++....
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N----h---p-~~~~~~~di~~i~~~~ 277 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN----H---P-QTEVRNEKADEFLALL 277 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH----C---T-TSEEEESCHHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH----C---C-CCceecCcHHHhhhhh
Confidence 479999999999998887755 3 678999999998887654 3 2 4678889998876543
No 311
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=96.17 E-value=0.013 Score=63.65 Aligned_cols=86 Identities=16% Similarity=0.108 Sum_probs=59.3
Q ss_pred CCEEEEEcCCCchhHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 163 GDLVLDVFAGVGPFSIPAARRGA--IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~g~--~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.-+++|||||.|++++-+.+.|. .|.|+|+++.|.+..+.|. + ...++++|+.++........+...
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~-------p-~~~~~~~DI~~l~~~~~~gdi~~~--- 919 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN-------P-GTTVFTEDCNVLLKLVMAGEVTNS--- 919 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC-------T-TSEEECSCHHHHHHHHTTTCSBCS---
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-------C-CCcEeeccHHHHhHhhhccchhhh---
Confidence 34899999999999999999886 5789999999998877653 1 356889999887644221110000
Q ss_pred CCC-CCCCCcccEEEECChh
Q psy16898 241 EGN-STGGTAVARVIMNLPA 259 (324)
Q Consensus 241 ~~~-~~~~~~fD~Vi~npP~ 259 (324)
.+. -.....+|+|+.-||.
T Consensus 920 ~~~~lp~~~~vDvl~GGpPC 939 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGGPPC 939 (1330)
T ss_dssp SCCBCCCTTTCSEEEECCCC
T ss_pred hhhhccccCccceEEecCCC
Confidence 000 0012358999999987
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.03 E-value=0.014 Score=53.30 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=63.7
Q ss_pred ccCCCEEEEEcC------CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA------GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARA 232 (324)
Q Consensus 160 ~~~g~~VLDl~~------G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~ 232 (324)
++.|.+|||+|| -.|++.+.-.. .|+.|+++|+++- .. .. . .++.+|+.....
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~-----------~s--da-~-~~IqGD~~~~~~----- 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----------VS--DA-D-STLIGDCATVHT----- 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----------BC--SS-S-EEEESCGGGEEE-----
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccc-----------cc--CC-C-eEEEcccccccc-----
Confidence 346899999997 66775333222 3569999999983 11 22 2 459999754211
Q ss_pred hhhhhcccCCCCCCCCcccEEEECC-hhhh----------HHHH----HHHhc-cchhhcCCCCCCCEEEEEEcccCCCh
Q psy16898 233 HLVRWSQSEGNSTGGTAVARVIMNL-PATA----------VEYV----RYLKV-LTREEFGKLSRPPVLYLYCFLPKMDL 296 (324)
Q Consensus 233 ~~~~~~~~~~~~~~~~~fD~Vi~np-P~~a----------~~~l----~~~~~-l~~~~~~~~~~~g~vh~y~f~~~~~~ 296 (324)
+..||+|++|. |... ..+. +-++. |++ ||.|.+-.|....++
T Consensus 167 --------------~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp--------GGsFvVKVFQGsg~~ 224 (344)
T 3r24_A 167 --------------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL--------GGSIAVKITEHSWNA 224 (344)
T ss_dssp --------------SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEE--------EEEEEEEECSSSCCH
T ss_pred --------------CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcC--------CCEEEEEEecCCCHH
Confidence 24599999995 3311 1122 22333 554 599999999998866
Q ss_pred hHHhHh
Q psy16898 297 ETKKKI 302 (324)
Q Consensus 297 ~~~~~v 302 (324)
...+..
T Consensus 225 ~L~~lr 230 (344)
T 3r24_A 225 DLYKLM 230 (344)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 313
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.75 E-value=0.0061 Score=55.59 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=31.3
Q ss_pred ccCCCEEEEEcCCCchhHHHHHh-cCC-EEEEEeCCHH
Q psy16898 160 VREGDLVLDVFAGVGPFSIPAAR-RGA-IVAANDLNPD 195 (324)
Q Consensus 160 ~~~g~~VLDl~~G~G~~al~~a~-~g~-~V~avD~~~~ 195 (324)
+.++.+||||||++|+++..++. .|+ +|+|+|+-..
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 66888999999999999998877 566 8999999764
No 314
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.93 E-value=0.019 Score=54.87 Aligned_cols=42 Identities=17% Similarity=0.067 Sum_probs=36.7
Q ss_pred CEEEEEcCCCchhHHHHHhcC--C-E----EEEEeCCHHHHHHHHHHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAARRG--A-I----VAANDLNPDSYAWLQASIR 205 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~g--~-~----V~avD~~~~a~~~a~~N~~ 205 (324)
-+|+|||||+|++++.+.+.| . - |.++|+++.|.+..+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 389999999999999998866 2 4 8899999999999888875
No 315
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.28 E-value=0.71 Score=40.97 Aligned_cols=60 Identities=20% Similarity=0.162 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCCch---hHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGP---FSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~---~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=-|++.|. ++..+|+.|++|+.+|.+++.++.+.+.++..+ - ++.++.+|+.+.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~--~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--K--EVLGVKADVSKK 68 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--C--cEEEEEccCCCH
Confidence 57888888876652 445555689999999999999998888887666 3 688999998653
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.61 E-value=0.37 Score=44.17 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=36.1
Q ss_pred hccCCCEEEEEcCC-CchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG-VGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G-~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.||| +|.+++.+|+ .|++|+++|.+++..+.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 35689999999886 4777777777 68899999999998887754
No 317
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.44 E-value=0.31 Score=44.74 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=36.4
Q ss_pred ccCCCEEEEEcCC--CchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAG--VGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~G--~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.||| +|..++.+|+ .|++|++++.+++.++.+++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 5689999999886 7778887777 68999999999988888764
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.19 E-value=0.36 Score=40.40 Aligned_cols=43 Identities=26% Similarity=0.261 Sum_probs=32.1
Q ss_pred hccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
.+.+|++||..|+ |+|...+.+++ .|++|+++|.+++..+.++
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 3568999999884 45555555554 6889999999998776654
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.64 E-value=0.18 Score=51.16 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=66.0
Q ss_pred EeCCeEEEEeccceeecCcCh-HHHHHH-Hh------hc----cCCCEEEEEcCCCchhHHHHHhc------------C-
Q psy16898 130 KENGCTFKMDFSKVYWNSRLS-TEHERV-TK------EV----REGDLVLDVFAGVGPFSIPAARR------------G- 184 (324)
Q Consensus 130 ~e~g~~f~id~~~~f~~~r~~-~e~~~~-~~------~~----~~g~~VLDl~~G~G~~al~~a~~------------g- 184 (324)
+++|.-|.-.+..+|++..-. .|-+.+ +. .. .+.-+|+|+|.|+|...+.+.+. .
T Consensus 14 ~~~~~~~s~~f~d~y~s~~~~~~e~~~~f~~~~~l~~~~~~~~~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~ 93 (689)
T 3pvc_A 14 NEQGTPVSEQFGDIYFSNEDGLEETHHVFLKGNGFPARFASHPQQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLR 93 (689)
T ss_dssp ---------------CCSTTSHHHHHHHTTTTTTTTHHHHHCCSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCC
T ss_pred CCCCcccCcccCCcccCCcCHHHhhHhhccccCCHHHHHhhCCCCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCc
Confidence 455666777777777765432 232221 11 11 13349999999999988877552 1
Q ss_pred -CEEEEEeCCHHHHHHHHHHHH--------------Hh-----CC-C--CCC---CeEEEeccHHHHHHHHHHHhhhhhc
Q psy16898 185 -AIVAANDLNPDSYAWLQASIR--------------LN-----ER-Q--VKT---PISATQKDARDFLQTDARAHLVRWS 238 (324)
Q Consensus 185 -~~V~avD~~~~a~~~a~~N~~--------------~n-----~~-~--l~~---~v~~~~~D~~~~~~~~~~~~~~~~~ 238 (324)
.+++++|..|-..+.+++-+. .- +. + +.+ .++++.+|+.+.+.+....
T Consensus 94 ~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~------ 167 (689)
T 3pvc_A 94 RLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDS------ 167 (689)
T ss_dssp EEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGG------
T ss_pred eEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccc------
Confidence 379999995544444433211 00 00 0 111 4778999999988763110
Q ss_pred ccCCCCCCCCcccEEEECChhh-------hHHHHHHHhc-cchh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPAT-------AVEYVRYLKV-LTRE 274 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~-------a~~~l~~~~~-l~~~ 274 (324)
....+|.+.+|+..- ..+++..+.. ++++
T Consensus 168 -------~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g 204 (689)
T 3pvc_A 168 -------LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPG 204 (689)
T ss_dssp -------GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEE
T ss_pred -------cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCC
Confidence 013499999997442 2456666665 5544
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.40 E-value=0.28 Score=46.22 Aligned_cols=43 Identities=35% Similarity=0.417 Sum_probs=35.5
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
.+++|++||-.|||. |.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 366899999999865 777777777 688 9999999999888764
No 321
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.10 E-value=1.3 Score=39.35 Aligned_cols=60 Identities=20% Similarity=0.133 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCCc---hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVG---PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G---~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=-|++.| .++..+++.|++|+.+|.+++.++.+.+.+...+ . ++.++.+|+.+.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~--~~~~~~~Dv~~~ 70 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--Y--DAHGVAFDVTDE 70 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--C--CEEECCCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--C--cEEEEEeeCCCH
Confidence 5777777776654 2344455579999999999999888887777666 3 588899998653
No 322
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.98 E-value=2.4 Score=36.52 Aligned_cols=59 Identities=20% Similarity=0.179 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG----GTAISVAVDVSDP 70 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTSH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CcEEEEEccCCCH
Confidence 4677887775 455555555 479999999999999888877776554 2688999998664
No 323
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.91 E-value=3.1 Score=36.35 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCc---hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVG---PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G---~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++.| .++..+++.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG----RRALSVGTDITDD 72 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 5778887776544 2334455579999999999998888887776655 2688999998654
No 324
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.89 E-value=1.5 Score=40.37 Aligned_cols=45 Identities=29% Similarity=0.382 Sum_probs=35.3
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCCE-EEEEeCCHHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGAI-VAANDLNPDSYAWLQAS 203 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~~-V~avD~~~~a~~~a~~N 203 (324)
.+++|++||-.|+|. |.+++.+|+ .|++ |+++|.+++..+.+++-
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 367899999988753 566666666 6885 99999999999998764
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.86 E-value=0.46 Score=43.76 Aligned_cols=44 Identities=23% Similarity=0.212 Sum_probs=34.0
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+|. |.+++.+|+ .|+ +|+++|.+++.++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 367899999998753 555666666 588 89999999998887754
No 326
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.39 E-value=2.9 Score=36.42 Aligned_cols=61 Identities=21% Similarity=0.174 Sum_probs=44.1
Q ss_pred CCCEEEEEcC-CCc---hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFA-GVG---PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~-G~G---~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ |.| .++..++++|++|+.++.++..++.+.+.++..+ - .++.++.+|+.+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--L-GRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--S-SCEEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--C-CceEEEEeCCCCH
Confidence 5678887776 433 2445556689999999999998888777775443 2 3799999998653
No 327
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.34 E-value=2.9 Score=37.42 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|++||=.|++ |.++..++ ++|++|+.++.++..++.+.+.+...+ . ++.++.+|+.+.
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--F--DAHGVVCDVRHL 92 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CEEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--C--ceEEEEccCCCH
Confidence 56788877766 55555544 479999999999999888887777655 3 588999998664
No 328
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.21 E-value=2.1 Score=39.09 Aligned_cols=44 Identities=27% Similarity=0.260 Sum_probs=34.7
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-c-CCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-R-GAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~-g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+|. |.+++.+|+ . |++|+++|.+++..+.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 467899999998753 666667776 3 6699999999998888754
No 329
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=88.94 E-value=3.6 Score=35.62 Aligned_cols=57 Identities=19% Similarity=0.077 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDA 222 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~ 222 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.+...+ -. ++.++..|+
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GR-QPQWFILDL 71 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SC-CCEEEECCT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CC-CceEEEEec
Confidence 56788877755 5555554 4579999999999998887777665543 22 577888887
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.90 E-value=1.1 Score=35.26 Aligned_cols=69 Identities=13% Similarity=0.057 Sum_probs=46.1
Q ss_pred EEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH--HHHHHHHhhhhhc
Q psy16898 165 LVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF--LQTDARAHLVRWS 238 (324)
Q Consensus 165 ~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~--~~~~~~~~~~~~~ 238 (324)
+|+=+| .|.+|..+++ .|..|+++|.+++.++.+++ .+ +.++.+|+.+. +....
T Consensus 9 ~viIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g------~~~i~gd~~~~~~l~~a~-------- 68 (140)
T 3fwz_A 9 HALLVG--YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG------VRAVLGNAANEEIMQLAH-------- 68 (140)
T ss_dssp CEEEEC--CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT------CEEEESCTTSHHHHHHTT--------
T ss_pred CEEEEC--cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC------CCEEECCCCCHHHHHhcC--------
Confidence 455555 4777766665 58899999999998877653 34 56788887643 22210
Q ss_pred ccCCCCCCCCcccEEEECChhhh
Q psy16898 239 QSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 239 ~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
...+|.||.-.|...
T Consensus 69 --------i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 69 --------LECAKWLILTIPNGY 83 (140)
T ss_dssp --------GGGCSEEEECCSCHH
T ss_pred --------cccCCEEEEECCChH
Confidence 134899998777643
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.85 E-value=0.62 Score=42.35 Aligned_cols=43 Identities=28% Similarity=0.403 Sum_probs=34.0
Q ss_pred ccCCCEEEEEc--CCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVF--AGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~--~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.| +|+|..++.+++ .|++|++++.+++.++.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56899999877 346666666666 68899999999998888763
No 332
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.71 E-value=3.3 Score=35.55 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..++ ++|++|+.++.++...+.+.+.++..+ . ++.++.+|+.+.
T Consensus 4 ~~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~~D~~~~ 66 (247)
T 3lyl_A 4 NEKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--F--KARGLVLNISDI 66 (247)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--C--CEEEEECCTTCH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C--ceEEEEecCCCH
Confidence 356677666 4566665555 479999999999998888877776655 3 588999998653
No 333
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.61 E-value=1.8 Score=37.94 Aligned_cols=61 Identities=11% Similarity=-0.049 Sum_probs=44.8
Q ss_pred CCCEEEEEcCC----Cc-hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAG----VG-PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G----~G-~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=-|++ .| .++..+++.|++|+.++.+++..+.+.+-++..+ - .++.++..|+.+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--Q-PEAHLYQIDVQSD 70 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--C-SSCEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--C-CcEEEEEccCCCH
Confidence 57889988853 33 3456666789999999999988888777665443 2 2688889998653
No 334
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=88.51 E-value=4.3 Score=35.35 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|+.++.+++.++.+.+.+.... ...++.++.+|+.+.
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~ 76 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA--PDAEVLTTVADVSDE 76 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC--TTCCEEEEECCTTSH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEccCCCH
Confidence 4677887775 566665554 479999999999988877766665431 113588889998653
No 335
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.47 E-value=3.9 Score=35.83 Aligned_cols=59 Identities=27% Similarity=0.182 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLN------------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++.. +++.|++|+.+|.+ ++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG----SRIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC----CeEEEEeCCCCCH
Confidence 57788877754 455544 45579999999987 777776666665555 2689999998653
No 336
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.38 E-value=0.79 Score=41.78 Aligned_cols=43 Identities=28% Similarity=0.311 Sum_probs=34.0
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.|+ |+|..++.+++ .|++|++++.+++.++.+++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 568999999884 56666666666 68899999999998887654
No 337
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.37 E-value=4.4 Score=34.63 Aligned_cols=57 Identities=21% Similarity=0.115 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDA 222 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~ 222 (324)
+|+++|=.|+ +|.++..+++ +|++|+.++.++..++.+.+.+...+ -. ++.++..|+
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QP-QPLIIALNL 73 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SC-CCEEEECCT
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CC-CceEEEecc
Confidence 5677776665 4666655554 79999999999999888887777655 33 566777665
No 338
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.28 E-value=2.4 Score=37.52 Aligned_cols=60 Identities=8% Similarity=-0.017 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.|++ |++|..+++ +|++|+.++.++...+.+.+.+...+ - .++.++.+|+.+.
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--H-ENVVFHQLDVTDP 74 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--C-CSEEEEECCTTSC
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C-CceEEEEccCCCc
Confidence 46677766654 666665554 79999999999988877777766443 2 3689999998653
No 339
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.24 E-value=0.65 Score=43.51 Aligned_cols=44 Identities=39% Similarity=0.434 Sum_probs=35.1
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|||. |.+++.+|+ .|+ +|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 356899999998754 666777777 688 89999999998888753
No 340
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.19 E-value=0.61 Score=43.29 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=35.5
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|||. |.+++.+|+ .|+ +|+++|.+++.++.+++
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 367899999999864 666777776 588 89999999998888753
No 341
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.17 E-value=3.3 Score=35.97 Aligned_cols=59 Identities=19% Similarity=0.163 Sum_probs=43.7
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ +.|++|+.++.+++..+.+.+.+...+ .++.++.+|+.+.
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG----GKAIGLECNVTDE 73 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 46677766654 55655554 479999999999998888877776555 3688999998654
No 342
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=88.16 E-value=3.3 Score=36.52 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=42.5
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..+ ++.|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG----HDVDGSSCDVTST 85 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----CCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 57788877755 4555544 4579999999999998888777776544 3688999998653
No 343
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.16 E-value=4 Score=35.78 Aligned_cols=61 Identities=16% Similarity=0.078 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ +|++|++++.++..++.+.+.+...+ ...++.++.+|+.+.
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG--YPGTLIPYRCDLSNE 95 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CSSEEEEEECCTTCH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC--CCceEEEEEecCCCH
Confidence 466777666 55677766654 68999999999988877776666555 444688888998653
No 344
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=88.08 E-value=3.8 Score=35.52 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=43.8
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVK-TPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~-~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..++ +.|++|+.++.++..++.+.+.+.... -. .++.++.+|+.+.
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN--KHVQEPIVLPLDITDC 71 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC--TTSCCCEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc--cccCcceEEeccCCCH
Confidence 46677777765 55555544 479999999999998888877776542 11 3688899998653
No 345
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.98 E-value=3.3 Score=36.05 Aligned_cols=59 Identities=15% Similarity=0.072 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.|+ +|.+|..+++ .|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG----GEAESHACDLSHS 90 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC----CceeEEEecCCCH
Confidence 5677776665 5667666554 69999999999999888887777655 2588999998653
No 346
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.81 E-value=3.6 Score=37.18 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|++||=.|++ |.++..++ ++|++|++++.++..++.+.+.+...+ ...++.++.+|+.+.
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG--SGPEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCTTCH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCCeEEEEECCCCCH
Confidence 46678877765 55665554 479999999999999888888777665 333688999998653
No 347
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.77 E-value=0.75 Score=42.44 Aligned_cols=43 Identities=30% Similarity=0.308 Sum_probs=34.6
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
.+.+|++||-.|||. |.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 213 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 367899999999763 666667776 688 9999999998888775
No 348
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.66 E-value=4.9 Score=35.76 Aligned_cols=59 Identities=15% Similarity=-0.009 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCc-----hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVG-----PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G-----~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++.| .++..+++.|++|+.++.++...+.+++-....+ ++.++.+|+.+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~ 93 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG-----AFVAGHCDVADA 93 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT-----CEEEEECCTTCH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-----CceEEECCCCCH
Confidence 5788998887643 3445556689999999999876666555554444 578889998653
No 349
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.66 E-value=3.6 Score=35.88 Aligned_cols=60 Identities=20% Similarity=0.087 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|+ +|.++..++ +.|++|+.++.+++.++.+.+.+...+ - .++.++.+|+.+.
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--S-GKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--S-SCEEEEECCTTSH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--C-CcEEEEEcCCCCH
Confidence 4667776664 566665555 479999999999998887777665443 2 3689999998653
No 350
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.63 E-value=1.7 Score=40.78 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=33.1
Q ss_pred ccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
+++|++||=.|+|. |.+++.+|+ .|+ +|+++|.+++.++.+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 56899999988742 455555565 688 99999999998888753
No 351
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=87.37 E-value=2.8 Score=37.09 Aligned_cols=59 Identities=19% Similarity=0.054 Sum_probs=43.7
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~ 93 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG----GKALPIRCDVTQP 93 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT----CCCEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCH
Confidence 57788877765 5555544 4579999999999988888777776555 2588899998653
No 352
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.32 E-value=2.4 Score=37.85 Aligned_cols=59 Identities=15% Similarity=0.003 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCC-ch----hHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGV-GP----FSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~-G~----~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++. .. ++..+++.|++|+.++.++...+.+++-....+ .+.++.+|+.+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~ 92 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-----VKLTVPCDVSDA 92 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-----CCEEEECCTTCH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-----CeEEEEcCCCCH
Confidence 577888888753 24 445555689999999999876666655555444 467888888653
No 353
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.25 E-value=4.9 Score=35.78 Aligned_cols=59 Identities=32% Similarity=0.297 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLN------------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++. +++.. +++.|++|+.+|.+ ++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 27 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG----RRIIASQVDVRDF 101 (299)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC----CceEEEECCCCCH
Confidence 577888877664 45544 45579999999987 677766666665544 3689999998654
No 354
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.25 E-value=5.4 Score=34.83 Aligned_cols=59 Identities=14% Similarity=-0.003 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.| |+|.++..+++ .|++|++++.++..++.+.+.++..+ .++.++.+|+.+.
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG----AKVHTFVVDCSNR 92 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC----CeEEEEEeeCCCH
Confidence 466777666 45677766665 68999999999988877766666544 2588999998653
No 355
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.25 E-value=5.4 Score=34.73 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.+.. .+ ..++.++.+|+.+.
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP---GARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST---TCCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CceEEEEeCCCCCH
Confidence 46777777765 4455544 45799999999999988888777765 33 12588999998653
No 356
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=87.14 E-value=3.8 Score=36.06 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..++ +.|++|+.++.++...+.+.+.+...+ . ++.++.+|+.+.
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~~Dv~d~ 89 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--L--EGRGAVLNVNDA 89 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--C--CCEEEECCTTCH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C--cEEEEEEeCCCH
Confidence 466777666 4555655544 579999999999998888877777666 3 478888888653
No 357
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.94 E-value=2.8 Score=36.49 Aligned_cols=59 Identities=17% Similarity=0.103 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+++++|=.|+ +|.++..++ +.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 5 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 5 KEKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP----GQILTVQMDVRNT 67 (257)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST----TCEEEEECCTTCH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCH
Confidence 4567776664 456665554 479999999999998887766654333 3688999998653
No 358
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.79 E-value=5.9 Score=34.10 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..++ +.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG----AKVHVLELDVADR 68 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 46677777754 66665555 479999999999988877766665444 2588889998653
No 359
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=86.74 E-value=4.1 Score=36.07 Aligned_cols=59 Identities=19% Similarity=0.053 Sum_probs=42.7
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+++++|=.|++ |.++..++ +.|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG----GQAIALEADVSDE 89 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCH
Confidence 56778877755 55555544 579999999999988887776665433 3688999998654
No 360
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.72 E-value=5.7 Score=34.74 Aligned_cols=59 Identities=15% Similarity=0.069 Sum_probs=41.8
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLN------------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.+|.+ ...++.+...+...+ .++.++.+|+.+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG----RKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT----SCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC----CceEEEEccCCCH
Confidence 46778877765 4555554 4579999999987 777777666665544 3688999998653
No 361
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.70 E-value=2.3 Score=33.20 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=47.3
Q ss_pred CCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH--HHHHHHHhhhh
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF--LQTDARAHLVR 236 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~--~~~~~~~~~~~ 236 (324)
..+|+=+|| |.+|..+++ .|..|+++|.+++.++.+++ .+ +.++.+|+.+. +...
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~------~~~~~gd~~~~~~l~~~------- 66 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG------FDAVIADPTDESFYRSL------- 66 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT------CEEEECCTTCHHHHHHS-------
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC------CcEEECCCCCHHHHHhC-------
Confidence 345777776 667766665 58899999999988776543 23 56778887653 2211
Q ss_pred hcccCCCCCCCCcccEEEECChhhh
Q psy16898 237 WSQSEGNSTGGTAVARVIMNLPATA 261 (324)
Q Consensus 237 ~~~~~~~~~~~~~fD~Vi~npP~~a 261 (324)
....+|.|+.-.|...
T Consensus 67 ---------~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 67 ---------DLEGVSAVLITGSDDE 82 (141)
T ss_dssp ---------CCTTCSEEEECCSCHH
T ss_pred ---------CcccCCEEEEecCCHH
Confidence 0134899999888643
No 362
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.59 E-value=4.3 Score=35.66 Aligned_cols=59 Identities=19% Similarity=0.066 Sum_probs=42.7
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |+++..++ +.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 3 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 3 MDKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG----GTALAQVLDVTDR 65 (264)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT----CEEEEEECCTTCH
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 35667766655 55555544 479999999999998888877776655 2588888888653
No 363
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.37 E-value=4.4 Score=35.36 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=43.1
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|+ +|.++..++ +.|++|+.++.++..++.+.+.+...+ ....+.++.+|+.+
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY--PDAILQPVVADLGT 72 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC--TTCEEEEEECCTTS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCceEEEEecCCCC
Confidence 4667776665 456665554 479999999999998887777776554 23357888888865
No 364
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.33 E-value=0.7 Score=43.00 Aligned_cols=44 Identities=27% Similarity=0.145 Sum_probs=35.2
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+|. |.+++.+|+ .|++|++++.+++.++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 367899999998863 666666676 68899999999998888764
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.25 E-value=1.8 Score=39.29 Aligned_cols=43 Identities=33% Similarity=0.373 Sum_probs=34.4
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+.+|++||-.|+ |+|..++.+++ .|++|++++.+++.++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 568999999884 67777766666 68899999999988887754
No 366
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.15 E-value=6.2 Score=34.65 Aligned_cols=59 Identities=15% Similarity=0.123 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ .|++|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~~~ 83 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----VEADGRTCDVRSV 83 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEECCCCCH
Confidence 4677887775 5666665554 79999999999988877666665444 2588888998653
No 367
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.14 E-value=0.6 Score=42.92 Aligned_cols=44 Identities=23% Similarity=0.083 Sum_probs=34.6
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+|. |.+++.+|+ .|++|++++.+++..+.+++
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 467899999998753 556666666 68899999999998887754
No 368
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.13 E-value=5.7 Score=34.94 Aligned_cols=59 Identities=25% Similarity=0.317 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCCchhHH----HHHhcCCEEEEEeCC----------------HHHHHHHHHHHHHhCCCCCCCeEEEecc
Q psy16898 162 EGDLVLDVFAGVGPFSI----PAARRGAIVAANDLN----------------PDSYAWLQASIRLNERQVKTPISATQKD 221 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al----~~a~~g~~V~avD~~----------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D 221 (324)
.|+++|=.|++.| ++. .+++.|++|+.+|.+ ++.++.+.+.+...+ .++.++.+|
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D 84 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN----RRIVTAEVD 84 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT----CCEEEEECC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC----CceEEEEcC
Confidence 5678887777644 444 445579999999987 666666655555433 368899999
Q ss_pred HHHH
Q psy16898 222 ARDF 225 (324)
Q Consensus 222 ~~~~ 225 (324)
+.+.
T Consensus 85 v~~~ 88 (286)
T 3uve_A 85 VRDY 88 (286)
T ss_dssp TTCH
T ss_pred CCCH
Confidence 8653
No 369
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.04 E-value=1.1 Score=40.59 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=33.2
Q ss_pred ccCCCEEEEEc--CCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVF--AGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~--~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.| +|+|..++.+++ .|++|++++.+++.++.+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 56899999988 355555555555 68899999999988887764
No 370
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.04 E-value=5.8 Score=33.86 Aligned_cols=58 Identities=19% Similarity=0.127 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.| |+|.++..+++ .|++|++++.++...+.+.+.+...+ .++.++.+|+.+
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 71 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG----GQAFACRCDITS 71 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTC
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC----CceEEEEcCCCC
Confidence 456776555 66777777665 68899999999988777666665444 258888899865
No 371
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=86.03 E-value=5.7 Score=34.89 Aligned_cols=61 Identities=18% Similarity=0.090 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVK-TPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~-~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.++..+ -. .++.++.+|+.+.
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG--ANGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--CSSCEEEEEECCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--CCCceEEEEeCCCCCH
Confidence 56778877754 5555544 4579999999999998888777776544 21 2688999998653
No 372
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=86.02 E-value=1.1 Score=41.26 Aligned_cols=43 Identities=33% Similarity=0.366 Sum_probs=34.1
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
.+++|++||-.|+|. |.+++.+|+ .|++|+++|.+++.++.++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 367899999998753 555666666 6889999999999888875
No 373
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.95 E-value=4.7 Score=35.96 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=41.2
Q ss_pred CCCEEEEEcCCCc---hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVG---PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G---~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=-|++.| .++..+++.|++|+.+|.+++.++.+.+.+ + .++..+.+|+.+.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g----~~~~~~~~Dv~~~ 87 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G----GGAVGIQADSANL 87 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTCEEEECCTTCH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C----CCeEEEEecCCCH
Confidence 6888888887665 244555567999999999999887665433 3 2577888887653
No 374
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=85.91 E-value=6.7 Score=34.33 Aligned_cols=59 Identities=27% Similarity=0.277 Sum_probs=41.7
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeC-------------CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDL-------------NPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~-------------~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|++ |.++.. +++.|++|+.+|. ++..++.+.+.+...+ .++.++.+|+.+
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 84 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN----RRIVAAVVDTRD 84 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTTC
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC----CeEEEEECCCCC
Confidence 56788877765 445544 4457999999998 6777776666665544 268899999865
Q ss_pred H
Q psy16898 225 F 225 (324)
Q Consensus 225 ~ 225 (324)
.
T Consensus 85 ~ 85 (277)
T 3tsc_A 85 F 85 (277)
T ss_dssp H
T ss_pred H
Confidence 4
No 375
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.75 E-value=4.1 Score=36.99 Aligned_cols=43 Identities=35% Similarity=0.396 Sum_probs=32.3
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-c-CCEEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-R-GAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~-g~~V~avD~~~~a~~~a~ 201 (324)
.+++|++||=.|+|. |.+++.+++ . |++|+++|.+++-++.++
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~ 205 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK 205 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh
Confidence 356899999999875 445555555 3 669999999998776654
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.65 E-value=1.9 Score=39.62 Aligned_cols=43 Identities=30% Similarity=0.266 Sum_probs=33.3
Q ss_pred ccCCCEEEEEc--CCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVF--AGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~--~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.| +|+|..++.+|+ .|++|++++.+++.++.+++
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 56899999774 345666666666 68899999999998888764
No 377
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.59 E-value=6.3 Score=34.58 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=41.9
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeC-------------CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDL-------------NPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~-------------~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|++ |.++.. +++.|++|+.+|. +++.++.+.+.+...+ .++.++.+|+.+
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG----RKALTRVLDVRD 88 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT----CCEEEEECCTTC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC----CeEEEEEcCCCC
Confidence 56778877765 455544 4457999999998 6777777766665544 368899999865
Q ss_pred H
Q psy16898 225 F 225 (324)
Q Consensus 225 ~ 225 (324)
.
T Consensus 89 ~ 89 (280)
T 3pgx_A 89 D 89 (280)
T ss_dssp H
T ss_pred H
Confidence 3
No 378
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.51 E-value=3.5 Score=36.30 Aligned_cols=59 Identities=19% Similarity=0.067 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|+ +|.++..++ +.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 25 ~gk~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~ 87 (271)
T 4ibo_A 25 GGRTALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG----HDAEAVAFDVTSE 87 (271)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEEcCCCCH
Confidence 5677776664 555655554 479999999999998888877776555 2588999998654
No 379
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=85.47 E-value=5.7 Score=35.75 Aligned_cols=59 Identities=25% Similarity=0.227 Sum_probs=40.7
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLN------------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.+|.+ ++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG----RRIIARQADVRDL 119 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC----CeEEEEECCCCCH
Confidence 46777776655 5555444 4579999999986 666666666555544 2688999998653
No 380
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=85.32 E-value=5.6 Score=35.01 Aligned_cols=59 Identities=12% Similarity=-0.008 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|++||=.| |+|.+|..+++ +|++|++++.++..++.+.+.+...+ -. ++.++.+|+.+
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~Dl~d 89 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AA-SAHYIAGTMED 89 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CS-EEEEEECCTTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CC-ceEEEeCCCCC
Confidence 467788666 55677766554 68999999999988877766665444 22 58889999865
No 381
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.32 E-value=5 Score=35.25 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=41.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCC-CCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQV-KTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l-~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..++ ++|++|+.++.+++.++.+.+.+...+ . ..++.++.+|+.+.
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~ 70 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG--VSEKQVNSVVADVTTE 70 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCGGGEEEEECCTTSH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC--CCCcceEEEEecCCCH
Confidence 456676666 4566665555 479999999999988877766665433 2 11588899998653
No 382
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=85.26 E-value=7.6 Score=33.47 Aligned_cols=58 Identities=19% Similarity=0.090 Sum_probs=40.4
Q ss_pred CCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.| |+|.++..++ +.|++|+.++.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 63 (256)
T 1geg_A 2 KKVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG----GHAVAVKVDVSDR 63 (256)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEecCCCH
Confidence 34566666 4566666555 479999999999988777666665444 2588888998653
No 383
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=85.21 E-value=7.9 Score=33.49 Aligned_cols=59 Identities=12% Similarity=0.069 Sum_probs=41.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLN-ERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ .|++|++++.++..++.+.+.+... + .++.++.+|+.+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~ 69 (263)
T 3ai3_A 6 SGKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG----VRVLEVAVDVATP 69 (263)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTSH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC----CceEEEEcCCCCH
Confidence 4667776665 4666665554 7999999999998877666655443 4 2588889998653
No 384
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=85.21 E-value=4.4 Score=35.82 Aligned_cols=60 Identities=20% Similarity=0.076 Sum_probs=41.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|+ +|.++..+++ .|++|+.++.++..++.+.+.+...+ -. .+.++.+|+.+.
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~Dv~d~ 95 (281)
T 4dry_A 32 EGRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GN-IVRAVVCDVGDP 95 (281)
T ss_dssp --CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SS-CEEEEECCTTCH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CC-eEEEEEcCCCCH
Confidence 5677776665 4666655554 69999999999998887777665443 22 458889998654
No 385
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.11 E-value=7 Score=33.89 Aligned_cols=59 Identities=22% Similarity=0.224 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ .|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 68 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG----VEARSYVCDVTSE 68 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----SCEEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEecCCCH
Confidence 4667776665 5566665554 79999999999988877666665434 2588889998653
No 386
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.00 E-value=3 Score=36.99 Aligned_cols=59 Identities=27% Similarity=0.210 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 69 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG----GEAAALAGDVGDE 69 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT----CCEEECCCCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 46677766655 5555544 4579999999999998887776665433 3688899998653
No 387
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.98 E-value=1.2 Score=41.26 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=33.4
Q ss_pred ccCCCEEEEEcCCC-chhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGV-GPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~G~-G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.|||. |..++.+|+ .|++|++++.+++.++.+++
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 56899999998653 555556666 68899999999998887654
No 388
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=84.87 E-value=2.3 Score=38.89 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=60.8
Q ss_pred CEEEEEcCCCchhHHHHHh------cCC--EEEEEeCCH--------HHHHHHHHHHHHhCCCCC-C--CeEEEeccHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAAR------RGA--IVAANDLNP--------DSYAWLQASIRLNERQVK-T--PISATQKDARD 224 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~------~g~--~V~avD~~~--------~a~~~a~~N~~~n~~~l~-~--~v~~~~~D~~~ 224 (324)
-+|||+|-|+|...+.+.+ ... +.+++|..+ ..+..+.+.+...-.... + ..++..+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 3799999999987654432 223 567777532 111111111111100010 1 35788999998
Q ss_pred HHHHHHHHhhhhhcccCCCCCCCCcccEEEECC--hhh-----hHHHHHHHhc-cchhhcCCCCCCCEEEEEEccc
Q psy16898 225 FLQTDARAHLVRWSQSEGNSTGGTAVARVIMNL--PAT-----AVEYVRYLKV-LTREEFGKLSRPPVLYLYCFLP 292 (324)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~np--P~~-----a~~~l~~~~~-l~~~~~~~~~~~g~vh~y~f~~ 292 (324)
.+.+.. ...+|.|..|+ |.. ..+++..+.. ++++ |.+..||...
T Consensus 178 ~l~~l~----------------~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pg--------g~laTYtaag 229 (308)
T 3vyw_A 178 RIKEVE----------------NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEK--------GYWVSYSSSL 229 (308)
T ss_dssp HGGGCC----------------SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEE--------EEEEESCCCH
T ss_pred HHhhhc----------------ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCC--------cEEEEEeCcH
Confidence 876531 12499999996 443 2467777766 6654 7777776654
No 389
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=84.82 E-value=1.6 Score=39.92 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=34.4
Q ss_pred hccCCCEEEEEcCC-CchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG-VGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G-~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
.+.+|++||-.|+| +|..++.+|+ .|++|++++.+++.++.++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 205 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 205 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46789999999985 4666666666 6889999999999888775
No 390
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.71 E-value=8.5 Score=32.94 Aligned_cols=59 Identities=15% Similarity=0.202 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.| |+|.++..+++ +|++|++++.++...+.+.+.++..+ .++.++.+|+.+.
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~ 74 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG----HDVSSVVMDVTNT 74 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEEecCCCH
Confidence 467777666 55777766655 68999999999987776666665444 2588999998653
No 391
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=84.62 E-value=0.13 Score=48.26 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=32.2
Q ss_pred CEEEEEcCCCchhHHHHHhc------------C------CEEEEEeCCHHHHHHHHHHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAARR------------G------AIVAANDLNPDSYAWLQASIR 205 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~~------------g------~~V~avD~~~~a~~~a~~N~~ 205 (324)
-+|+|+||++|+.++.+... + ..|+.+|+-...+..+-+++.
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~ 112 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP 112 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc
Confidence 47999999999999876653 1 378888988887777766553
No 392
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=84.29 E-value=1.5 Score=39.99 Aligned_cols=43 Identities=40% Similarity=0.362 Sum_probs=36.2
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.|+ |+|..++.+++ .|++|++++.+++.++.+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 568999999998 67888877777 68899999999998888753
No 393
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=84.28 E-value=8.7 Score=33.61 Aligned_cols=59 Identities=22% Similarity=0.125 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLN------------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~------------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ +.|++|+.+|.+ .+.++...+.+...+ .++.++.+|+.+.
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 83 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG----RRCISAKVDVKDR 83 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC----CeEEEEeCCCCCH
Confidence 46788877765 55555544 479999999987 666666555555444 3688999998653
No 394
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.26 E-value=0.76 Score=42.14 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=24.3
Q ss_pred CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 214 PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 214 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...++++|+.+.+.... ...||.|++|||+.
T Consensus 14 ~~~ii~gD~~~~l~~l~----------------~~svDlI~tDPPY~ 44 (323)
T 1boo_A 14 NGSMYIGDSLELLESFP----------------EESISLVMTSPPFA 44 (323)
T ss_dssp SEEEEESCHHHHGGGSC----------------SSCEEEEEECCCCS
T ss_pred CceEEeCcHHHHHhhCC----------------CCCeeEEEECCCCC
Confidence 67899999998765421 24599999999994
No 395
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=83.99 E-value=3.3 Score=37.06 Aligned_cols=60 Identities=20% Similarity=0.104 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|+ +|.++..++ +.|++|+.++.++..++.+.+.+...+ - .++.++.+|+.+.
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~Dv~d~ 103 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--A-GNVIGVRLDVSDP 103 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--S-SCEEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--C-CcEEEEEEeCCCH
Confidence 5677776665 455555544 479999999999988777766665433 2 3688999998754
No 396
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=83.95 E-value=8.1 Score=34.30 Aligned_cols=58 Identities=21% Similarity=0.158 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.|+ +|.++..+++ .|++|++++.++..++.+.+.+...+ .++.++.+|+.+
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d 94 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG----INAHGYVCDVTD 94 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEEecCCC
Confidence 5677877765 5666666554 69999999999988777666665444 257888899865
No 397
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=83.88 E-value=7.2 Score=34.22 Aligned_cols=59 Identities=10% Similarity=-0.004 Sum_probs=41.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ +.|++|+.++.+....+.+.+.+.. .+ .++.++.+|+.+.
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG----RRCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 57788877765 55555544 4799999999999877766655543 23 2688999998653
No 398
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.85 E-value=4.1 Score=35.27 Aligned_cols=60 Identities=15% Similarity=-0.061 Sum_probs=41.4
Q ss_pred cCCCEEEEEcCC-CchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 161 REGDLVLDVFAG-VGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 161 ~~g~~VLDl~~G-~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++||=.|++ +|.++..++ +.|++|+.++.+....+.+++-....+ ++.++.+|+.+.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~ 76 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-----SELVFPCDVADD 76 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-----CCCEEECCTTCH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC-----CcEEEECCCCCH
Confidence 367889988874 466665555 479999999998765555555444433 477888888653
No 399
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=83.75 E-value=1.5 Score=40.72 Aligned_cols=44 Identities=23% Similarity=0.299 Sum_probs=34.5
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+|. |.+++.+|+ .|+ +|+++|.+++..+.+++
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 467899999998753 555666666 688 99999999998887764
No 400
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.65 E-value=7.9 Score=36.03 Aligned_cols=73 Identities=18% Similarity=0.096 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCC-CeEEEeccHHHHHHHHHHHhhhhhccc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKT-PISATQKDARDFLQTDARAHLVRWSQS 240 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~ 240 (324)
.+..||.++.+.|.+++.++.. .++.+.-|--+...++.|+..|+ ++. .+++...-.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~--~~~~~~~~~~~~~------------------ 95 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNG--IDESSVKFLDSTA------------------ 95 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTT--CCGGGSEEEETTS------------------
T ss_pred CCCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcC--CCccceEeccccc------------------
Confidence 4568999999999999998754 45666568888889999999999 863 355543211
Q ss_pred CCCCCCCCcccEEEECChhh
Q psy16898 241 EGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 241 ~~~~~~~~~fD~Vi~npP~~ 260 (324)
.....+|.|++-+|..
T Consensus 96 ----~~~~~~~~v~~~lpk~ 111 (375)
T 4dcm_A 96 ----DYPQQPGVVLIKVPKT 111 (375)
T ss_dssp ----CCCSSCSEEEEECCSC
T ss_pred ----ccccCCCEEEEEcCCC
Confidence 0124599999999984
No 401
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.33 E-value=7.4 Score=34.64 Aligned_cols=61 Identities=23% Similarity=0.149 Sum_probs=42.7
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCC-CCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQV-KTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l-~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ .|++|+.++.+++.++.+.+.+...+ . ..++.++.+|+.+.
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~d~ 90 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG--VPAEKINAVVADVTEA 90 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEECCTTSH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEEecCCCCH
Confidence 466777665 45667666554 69999999999988877766665444 2 11588899998653
No 402
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.29 E-value=6.8 Score=34.56 Aligned_cols=56 Identities=21% Similarity=0.242 Sum_probs=39.1
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++.. +++.|++|+.++.+++.++.+.+.+ + .++.++.+|+.+.
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~d~ 87 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G----CGAAACRVDVSDE 87 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C----SSCEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C----CcceEEEecCCCH
Confidence 56777777655 445444 4557999999999998777665443 3 2578888988654
No 403
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.22 E-value=8.2 Score=33.98 Aligned_cols=59 Identities=12% Similarity=0.061 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++.. +++.|++|+.++. +++.++.+.+.+...+ .++.++.+|+.+.
T Consensus 28 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 91 (280)
T 4da9_A 28 ARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG----ARVIFLRADLADL 91 (280)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT----CCEEEEECCTTSG
T ss_pred CCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEEecCCCH
Confidence 56778877755 455544 4457999999995 7877777777666555 2588999998653
No 404
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=83.11 E-value=18 Score=31.95 Aligned_cols=127 Identities=10% Similarity=0.027 Sum_probs=73.4
Q ss_pred CCEEEEEcCCCchhHHHHHh---------cCCEEEEEeC-----CHH-------------------HHHHHHHHH-----
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR---------RGAIVAANDL-----NPD-------------------SYAWLQASI----- 204 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~---------~g~~V~avD~-----~~~-------------------a~~~a~~N~----- 204 (324)
...|+++|+.-|.-++.++. ...+|+++|. .+. ..+..++-+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 44899999999998888664 1359999992 210 011122111
Q ss_pred -HHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChh--hhHHHHHHHhc-cchhhcCCCC
Q psy16898 205 -RLNERQVKTPISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPA--TAVEYVRYLKV-LTREEFGKLS 280 (324)
Q Consensus 205 -~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~--~a~~~l~~~~~-l~~~~~~~~~ 280 (324)
+.-+. +.++++++.|++.+.+.....+. +...+|.|.+|--. .....++.+.. +++
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~------------~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~------- 209 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAEN------------PQTVIALAYFDLDLYEPTKAVLEAIRPYLTK------- 209 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHC------------TTCCEEEEEECCCCHHHHHHHHHHHGGGEEE-------
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhC------------CCCceEEEEEcCcccchHHHHHHHHHHHhCC-------
Confidence 11220 23689999999999888754421 12359999998632 12345555544 444
Q ss_pred CCCEEEEEEcccCCChhHHhHhhhcCCCce
Q psy16898 281 RPPVLYLYCFLPKMDLETKKKIKSYDPSYA 310 (324)
Q Consensus 281 ~~g~vh~y~f~~~~~~~~~~~v~~y~~~~~ 310 (324)
||+|.+..+....-+...+.++.+.....
T Consensus 210 -GGvIv~DD~~~~~w~G~~~A~~ef~~~~~ 238 (257)
T 3tos_A 210 -GSIVAFDELDNPKWPGENIAMRKVLGLDH 238 (257)
T ss_dssp -EEEEEESSTTCTTCTHHHHHHHHHTCTTS
T ss_pred -CcEEEEcCCCCCCChHHHHHHHHHHhhCC
Confidence 48888887743211223334444444333
No 405
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.00 E-value=3.2 Score=37.92 Aligned_cols=42 Identities=33% Similarity=0.414 Sum_probs=33.0
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.|+ |+|..++.+|+ .|++|+++ .+++.++.+++
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH
Confidence 568999999983 46777777777 68899999 88888777643
No 406
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=82.94 E-value=9.4 Score=32.91 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=41.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.| |+|.++..+++ .|++|+.++.+++.++.+.+.+...+ . ++.++.+|+.+
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~D~~~ 74 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG--L--SVTGTVCHVGK 74 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CEEEEECCTTC
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C--ceEEEEccCCC
Confidence 466777665 55667766554 69999999999988776666665444 2 58888888754
No 407
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=82.88 E-value=8.8 Score=33.54 Aligned_cols=59 Identities=20% Similarity=0.059 Sum_probs=41.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|+.++. ++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~d~ 90 (269)
T 4dmm_A 27 TDRIALVTGA-SRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG----GEAFAVKADVSQE 90 (269)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 5677776665 455655544 47999999888 7777777766666554 2688999998664
No 408
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.88 E-value=6.7 Score=34.20 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|++ |.++..++ +.|++|+.++.++..++.+.+.+.. .+ .++.++.+|+.+
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~ 81 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG----TDVHTVAIDLAE 81 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEecCCC
Confidence 46777766654 55655554 4799999999999988877776655 34 268899999865
No 409
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=82.83 E-value=1.9 Score=40.54 Aligned_cols=21 Identities=10% Similarity=-0.031 Sum_probs=18.2
Q ss_pred CCEEEEEcCCCchhHHHHHhc
Q psy16898 163 GDLVLDVFAGVGPFSIPAARR 183 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~~ 183 (324)
..+|+|+|||+|..++.++..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHH
Confidence 468999999999999998653
No 410
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.72 E-value=13 Score=32.12 Aligned_cols=59 Identities=17% Similarity=-0.008 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG----FKVEASVCDLSSR 70 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 4677886665 566665555 479999999999988777666665444 2588888998653
No 411
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=82.51 E-value=1.3 Score=41.06 Aligned_cols=42 Identities=29% Similarity=0.367 Sum_probs=33.2
Q ss_pred ccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.|+|. |.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 56899999998752 555666666 688 8999999999888775
No 412
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=82.51 E-value=5.8 Score=34.88 Aligned_cols=58 Identities=16% Similarity=0.031 Sum_probs=40.1
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|+.++.++..++.+.+.+. . .. ++.++.+|+.+.
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~Dv~d~ 89 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS--A--YG-DCQAIPADLSSE 89 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT--T--SS-CEEECCCCTTSH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-ceEEEEeeCCCH
Confidence 4677887775 566665555 479999999999987766555443 2 22 578888887653
No 413
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.43 E-value=12 Score=32.67 Aligned_cols=58 Identities=16% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHH-HHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASI-RLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~-~~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.|+ +|.++..+++ .|++|++++.++..++.+.+.+ ...+ . ++.++.+|+.+
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~--~~~~~~~Dl~~ 82 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--V--ETMAFRCDVSN 82 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--C--CEEEEECCTTC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--C--eEEEEEcCCCC
Confidence 4677776665 5666665554 7999999999998877666555 3334 2 57888888865
No 414
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=82.38 E-value=1.8 Score=40.25 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=32.8
Q ss_pred cCCCEEEEEcCCCchhHHHH---Hh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPA---AR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~---a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+|++||=.++|+|.+++.+ |+ .|++|++++.+++-++.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 58899998876666666544 44 58899999999998888764
No 415
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=82.29 E-value=1.7 Score=39.74 Aligned_cols=44 Identities=20% Similarity=0.304 Sum_probs=35.3
Q ss_pred hccCCCEEEEEcCC--CchhHHHHHh-c-CCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG--VGPFSIPAAR-R-GAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G--~G~~al~~a~-~-g~~V~avD~~~~a~~~a~~ 202 (324)
.+.+|++||-.|+| +|..++.+++ . |++|+++|.+++..+.+++
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46789999999987 6666666666 5 8999999999998887753
No 416
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.24 E-value=11 Score=33.06 Aligned_cols=59 Identities=17% Similarity=0.071 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLN-ERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ +|++|++++.++..++.+.+.+... + .++.++.+|+.+.
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDP 88 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CceEEEEeCCCCH
Confidence 4667776664 5666666554 6899999999998877766665543 3 2588999998653
No 417
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=82.18 E-value=10 Score=32.46 Aligned_cols=59 Identities=19% Similarity=0.098 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ .|++|+.++. ++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 3 ~~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 66 (246)
T 2uvd_A 3 KGKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG----SDAIAVRADVANA 66 (246)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 356666554 56777766654 6899999998 8887776666665444 2588888888653
No 418
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=82.13 E-value=1.5 Score=39.75 Aligned_cols=41 Identities=29% Similarity=0.375 Sum_probs=33.2
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWL 200 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a 200 (324)
+.+|++||-.|| |+|..++.+++ .|++|+++|.+++.++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 568999999997 56666666665 688999999999887776
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.05 E-value=11 Score=32.28 Aligned_cols=59 Identities=12% Similarity=-0.027 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchhHHHHH----h-cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----R-RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~-~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++||=.| |+|.++..++ + .|++|+.++.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG----LSPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTCH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC----CeeEEEECCCCCH
Confidence 456677554 6677776665 4 68899999999988777777666544 2588899998653
No 420
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=82.02 E-value=1.2 Score=41.16 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=33.5
Q ss_pred hccCCCEEEEEcCC-CchhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG-VGPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 159 ~~~~g~~VLDl~~G-~G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
.+.+|++||-.||| +|.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 233 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI 233 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 36689999999875 3555666666 588 8999999999888775
No 421
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=81.92 E-value=0.88 Score=41.10 Aligned_cols=42 Identities=21% Similarity=0.072 Sum_probs=33.4
Q ss_pred ccCCCEEEEEcCC-CchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFAG-VGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~G-~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||=.|+| +|.+++.+|+ .|++|++++ +++..+.+++
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH
Confidence 5689999999985 4666666776 688999999 9888887754
No 422
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=81.86 E-value=1.8 Score=40.24 Aligned_cols=42 Identities=26% Similarity=0.264 Sum_probs=33.3
Q ss_pred ccCCCEEEEEcCC-CchhHHHHHh-cC-CEEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAG-VGPFSIPAAR-RG-AIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G-~G~~al~~a~-~g-~~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.||| +|.+++.+|+ .| ++|++++.+++.++.++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 6689999999965 4556666666 68 49999999999888875
No 423
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=81.86 E-value=5.3 Score=35.26 Aligned_cols=59 Identities=17% Similarity=0.127 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCCch---hHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGP---FSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~---~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=-|++.|. ++..+++.|++|+.++.+.+..+.+++ +...+ .++.++.+|+.+.
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~-~~~~~----~~~~~~~~Dv~~~ 67 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDA-LAQRQ----PRATYLPVELQDD 67 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHH-HHHHC----TTCEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHH-HHhcC----CCEEEEEeecCCH
Confidence 57888888877663 455666789999999998776555444 33333 2578888988653
No 424
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.82 E-value=1.7 Score=39.78 Aligned_cols=43 Identities=7% Similarity=0.042 Sum_probs=34.3
Q ss_pred hccCCCEEEEEcCCC-chhHHHHHh-c--CCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAGV-GPFSIPAAR-R--GAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G~-G~~al~~a~-~--g~~V~avD~~~~a~~~a~~ 202 (324)
.+ +|++||-.|+|. |.+++.+|+ . |++|+++|.+++.++.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 45 899999999853 556666666 5 8999999999998888754
No 425
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=81.80 E-value=8.6 Score=33.30 Aligned_cols=61 Identities=23% Similarity=0.090 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|++++.++...+.+.+.+.... -..++.++.+|+.+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~ 70 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF--EPQKTLFIQCDVADQ 70 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS--CGGGEEEEECCTTSH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc--CCCceEEEecCCCCH
Confidence 4567777765 566665555 479999999999887766555443211 112588889998653
No 426
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=81.63 E-value=7 Score=33.34 Aligned_cols=59 Identities=22% Similarity=0.190 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCC-HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLN-PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~-~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=. .|+|.++..+++ +|++|++++.+ +..++.+.+.+...+ .++.++.+|+.+.
T Consensus 6 ~~k~vlVT-GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 69 (258)
T 3afn_B 6 KGKRVLIT-GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG----GDAAFFAADLATS 69 (258)
T ss_dssp TTCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT----CEEEEEECCTTSH
T ss_pred CCCEEEEe-CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC----CceEEEECCCCCH
Confidence 45677744 456777776665 68999999998 666666555555444 2588999998653
No 427
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=81.62 E-value=1.5 Score=40.70 Aligned_cols=42 Identities=26% Similarity=0.286 Sum_probs=32.9
Q ss_pred ccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.|+|. |.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 56899999998753 555566666 688 8999999999888775
No 428
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=81.57 E-value=12 Score=32.93 Aligned_cols=63 Identities=10% Similarity=0.068 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCC-CCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNER-QVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~-~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.|+ +|.++..+++ .|++|++++.++..++.+.+.+..... ....++.++.+|+.+.
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 84 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH
Confidence 4678887774 5777766654 689999999999888777766654210 0013688999998653
No 429
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.53 E-value=1.5 Score=40.70 Aligned_cols=42 Identities=26% Similarity=0.306 Sum_probs=33.1
Q ss_pred ccCCCEEEEEcCC-CchhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAG-VGPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G-~G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.|+| +|.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 237 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 237 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5689999999875 3555666666 688 8999999998888765
No 430
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.50 E-value=6.4 Score=34.63 Aligned_cols=58 Identities=21% Similarity=0.146 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|+ +|.++..++ +.|++|+.++.++...+.+.+.+...+ .++.++.+|+.+
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~ 93 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG----GTAQELAGDLSE 93 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT----CCEEEEECCTTS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CeEEEEEecCCC
Confidence 5777776665 456665554 479999999999988877777776555 268899999865
No 431
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.43 E-value=9.5 Score=28.01 Aligned_cols=71 Identities=21% Similarity=0.076 Sum_probs=45.7
Q ss_pred CCEEEEEcCCCchhHHHHHh----cC-CEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHHHHHHHHHhhhhh
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR----RG-AIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDFLQTDARAHLVRW 237 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~----~g-~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 237 (324)
+.+|+=+|+ |.++..+++ .| .+|+++|.++..++.+. . . .+.++..|..+.-. ..+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~--~--~~~~~~~d~~~~~~--~~~~---- 66 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------R--M--GVATKQVDAKDEAG--LAKA---- 66 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------T--T--TCEEEECCTTCHHH--HHHH----
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------h--C--CCcEEEecCCCHHH--HHHH----
Confidence 457888877 777766554 68 69999999998776654 2 1 35667777654311 1110
Q ss_pred cccCCCCCCCCcccEEEECChhh
Q psy16898 238 SQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 238 ~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...+|.||...|..
T Consensus 67 ---------~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 67 ---------LGGFDAVISAAPFF 80 (118)
T ss_dssp ---------TTTCSEEEECSCGG
T ss_pred ---------HcCCCEEEECCCch
Confidence 12389999887764
No 432
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.41 E-value=1.9 Score=39.79 Aligned_cols=44 Identities=23% Similarity=0.355 Sum_probs=36.1
Q ss_pred hccCCCEEEEEc--CCCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVF--AGVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~--~G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.| .|+|..++.+|+ .|++|++++.+++.++.+++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 367899999998 467888888777 68899999999988887754
No 433
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=81.38 E-value=9.2 Score=33.81 Aligned_cols=58 Identities=16% Similarity=0.060 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEe-CCHHHHHHHHHHHH-HhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAAND-LNPDSYAWLQASIR-LNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD-~~~~a~~~a~~N~~-~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.|+ +|.++..+++ .|++|+.++ .++..++.+.+.+. ..+ .++.++.+|+.+
T Consensus 8 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 8 TVPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP----NSAITVQADLSN 71 (291)
T ss_dssp CCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSS
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC----CeeEEEEeecCC
Confidence 4567776654 5666666554 699999999 99988877766665 333 257888887654
No 434
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=81.34 E-value=10 Score=32.64 Aligned_cols=59 Identities=12% Similarity=-0.010 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ .|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 4 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 66 (260)
T 2qq5_A 4 NGQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG----GQCVPVVCDSSQE 66 (260)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS----SEEEEEECCTTSH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC----CceEEEECCCCCH
Confidence 356676666 55667766654 69999999999988877666665444 2588889998653
No 435
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=81.30 E-value=1.4 Score=40.83 Aligned_cols=42 Identities=24% Similarity=0.304 Sum_probs=32.9
Q ss_pred ccCCCEEEEEcCCC-chhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAGV-GPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G~-G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
+++|++||-.|+|. |.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~ 232 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 56899999998753 555556665 588 8999999999888875
No 436
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=81.27 E-value=1 Score=39.77 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=23.9
Q ss_pred CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 214 PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 214 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
..+++++|+.+++.... ..+||.|++|||+.
T Consensus 4 ~~~l~~gD~~~~l~~l~----------------~~~vdlI~~DPPY~ 34 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE----------------NKSVQLAVIDPPYN 34 (260)
T ss_dssp SSSEEECCHHHHHHHSC----------------TTCEEEEEECCCCS
T ss_pred cCeEEechHHHHHHhcc----------------ccccCEEEECCCCC
Confidence 35688999999876532 13599999999984
No 437
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=81.27 E-value=1.2 Score=40.41 Aligned_cols=42 Identities=24% Similarity=0.293 Sum_probs=34.4
Q ss_pred hccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHH
Q psy16898 159 EVREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWL 200 (324)
Q Consensus 159 ~~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a 200 (324)
.+++|++||-.|| |+|..++.+++ .|++|++++.+++.++.+
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3678999999987 56777777776 688999999999887776
No 438
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.17 E-value=11 Score=32.42 Aligned_cols=56 Identities=27% Similarity=0.189 Sum_probs=38.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..++ +.|++|+.++.++...+.+.+.+ + .++.++.+|+.+.
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~D~~~~ 66 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G----PAAYAVQMDVTRQ 66 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C----CCceEEEeeCCCH
Confidence 4677887775 456655544 47999999999998766554433 3 2578888998653
No 439
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.17 E-value=1.2 Score=41.13 Aligned_cols=44 Identities=16% Similarity=0.027 Sum_probs=34.5
Q ss_pred hccCCCEEEEEcCC-CchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG-VGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G-~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+++|++||-.|+| +|.+++.+|+ .|++|++++.+++.++.+++
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 46789999999974 3555666666 68899999999988887764
No 440
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.11 E-value=2.7 Score=36.54 Aligned_cols=59 Identities=29% Similarity=0.171 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |+++..++ +.|++|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNE 68 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCH
Confidence 46777777765 45555544 579999999999998888887777655 2688999998653
No 441
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=81.09 E-value=1.4 Score=40.47 Aligned_cols=44 Identities=20% Similarity=0.214 Sum_probs=34.8
Q ss_pred hccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
.+.+|++||-.|+ |+|..++.+++ .|++|++++.+++..+.+++
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 3568999999998 56777766666 68899999999887776653
No 442
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=81.00 E-value=0.89 Score=40.80 Aligned_cols=42 Identities=31% Similarity=0.352 Sum_probs=34.6
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
+++|++||-.|+ |+|..++.+|+ .|++|++++.+++..+.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 167 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 167 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 678999999997 56777777776 6889999999998877764
No 443
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=80.88 E-value=10 Score=32.85 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ +.|++|+.++.+++.++.+.+.+ + .++.++.+|+.+.
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~~~ 66 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G----PRVHALRSDIADL 66 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G----GGEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C----CcceEEEccCCCH
Confidence 46788877755 55555544 47999999999998877665543 2 2588888988654
No 444
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=80.87 E-value=11 Score=32.70 Aligned_cols=59 Identities=20% Similarity=0.049 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|++||=.|++ |.++..++ ++|++|+.++. ++...+.+.+.++..+ . ++.++.+|+.+.
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~--~~~~~~~D~~~~ 91 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG--Y--KAAVIKFDAASE 91 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--C--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--C--ceEEEECCCCCH
Confidence 56777766654 55665554 47999999998 6666666666666555 2 588999998653
No 445
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.76 E-value=1.4 Score=40.45 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=24.1
Q ss_pred CeEEE-eccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 214 PISAT-QKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 214 ~v~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
...++ ++|+.+++..+. ..++|.|++|||+.
T Consensus 38 ~~~l~i~gD~l~~L~~l~----------------~~svDlI~tDPPY~ 69 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLP----------------DDSVQLIICDPPYN 69 (319)
T ss_dssp EEEEEEECCHHHHHHTSC----------------TTCEEEEEECCCSB
T ss_pred cceEEECCcHHHHHHhCc----------------cCCcCEEEECCCCC
Confidence 46788 999999886532 23599999999995
No 446
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=80.73 E-value=8.8 Score=32.42 Aligned_cols=58 Identities=12% Similarity=-0.000 Sum_probs=41.8
Q ss_pred CCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHH-HhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIR-LNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~-~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.|+ +|.++..+++ .|++|+.++.+++.++.+.+.+. ..+ .++.++.+|+.+.
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 64 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG----VEVFYHHLDVSKA 64 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTCH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC----CeEEEEEeccCCH
Confidence 456776664 5666665554 79999999999988887776665 334 2688999998664
No 447
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=80.71 E-value=0.88 Score=42.31 Aligned_cols=42 Identities=26% Similarity=0.288 Sum_probs=33.3
Q ss_pred ccCCCEEEEEcCC-CchhHHHHHh-cCC-EEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFAG-VGPFSIPAAR-RGA-IVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~G-~G~~al~~a~-~g~-~V~avD~~~~a~~~a~ 201 (324)
+++|++||-.|+| +|.+++.+|+ .|+ +|+++|.+++.++.++
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5689999999875 3566666666 588 8999999999888765
No 448
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=80.65 E-value=1.5 Score=39.96 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=34.5
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.|| |+|..++.+++ .|++|++++.+++.++.++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 568999999996 56777777776 6889999999998877765
No 449
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=80.64 E-value=8.6 Score=33.18 Aligned_cols=58 Identities=14% Similarity=0.007 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHH--HHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDS--YAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a--~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.|+ +|.++..++ +.|++|+.++.++.. ++.+.+.+...+ .++.++.+|+.+.
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 65 (258)
T 3a28_C 2 SKVAMVTGG-AQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD----QKAVFVGLDVTDK 65 (258)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT----CCEEEEECCTTCH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC----CcEEEEEccCCCH
Confidence 456666664 566665555 469999999998876 655555554333 3688899998653
No 450
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=80.55 E-value=13 Score=32.06 Aligned_cols=59 Identities=20% Similarity=0.056 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++||=.| |+|.++..+++ +|++|++++. ++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~ 83 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG----AQGVAIQADISKP 83 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC----CcEEEEEecCCCH
Confidence 466777555 56777776665 6899999998 8877776666665444 2588899998653
No 451
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=80.43 E-value=9.6 Score=32.73 Aligned_cols=56 Identities=27% Similarity=0.202 Sum_probs=39.1
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+.+ + .++.++.+|+.+.
T Consensus 5 ~gk~vlVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~~~ 64 (247)
T 3rwb_A 5 AGKTALVTGAA-QGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G----KKARAIAADISDP 64 (247)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C----TTEEECCCCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C----CceEEEEcCCCCH
Confidence 46778877754 5555554 457999999999998776654433 3 2588888888653
No 452
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=80.38 E-value=13 Score=31.87 Aligned_cols=56 Identities=25% Similarity=0.203 Sum_probs=39.5
Q ss_pred CCCEEEEEcCCCchhHH----HHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSI----PAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al----~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++. .++++|++|+.++.++..++.+.+.+ + .++.++.+|+.+.
T Consensus 8 ~~k~vlITGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~D~~~~ 67 (261)
T 3n74_A 8 EGKVALITGAG-SGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---G----DAALAVAADISKE 67 (261)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTEEEEECCTTSH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C----CceEEEEecCCCH
Confidence 46788877766 44444 44557999999999998777665532 3 2588899998653
No 453
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=80.33 E-value=21 Score=30.94 Aligned_cols=59 Identities=14% Similarity=-0.010 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ .|++|+.++.++..++.+.+.+...+ . ++.++.+|+.+.
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~~D~~~~ 82 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--L--NVEGSVCDLLSR 82 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--C--CEEEEECCTTCH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C--ceEEEECCCCCH
Confidence 4677887775 5666655554 69999999999988777666555444 2 588889998653
No 454
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.33 E-value=7 Score=35.36 Aligned_cols=44 Identities=30% Similarity=0.346 Sum_probs=33.1
Q ss_pred hccCCCEEEEEcCC-CchhHHHHHh-cCC-EEEEEeCCHHHHHHHHH
Q psy16898 159 EVREGDLVLDVFAG-VGPFSIPAAR-RGA-IVAANDLNPDSYAWLQA 202 (324)
Q Consensus 159 ~~~~g~~VLDl~~G-~G~~al~~a~-~g~-~V~avD~~~~a~~~a~~ 202 (324)
.+.+|++||=.|+| +|.+++.+|+ .|+ .++++|.+++-++.+++
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 36689999999875 3555666666 576 77999999998887753
No 455
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=80.29 E-value=5.8 Score=35.71 Aligned_cols=59 Identities=24% Similarity=0.282 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCC----------HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLN----------PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~----------~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+| +.|++|+.+|.+ ....+.+.+.+...+ .++.++.+|+.+.
T Consensus 26 ~gk~vlVTGas-~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 26 DGRVVIVTGAG-GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG----GEAVADGSNVADW 98 (322)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT----CEEEEECCCTTSH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 56777766654 55655544 579999999987 666666666666555 2588899998653
No 456
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=80.18 E-value=14 Score=32.54 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..++ +.|++|+.++. ++..++.+.+.+.... ..++.++.+|+.+.
T Consensus 24 ~~k~~lVTGas-~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~ 88 (281)
T 3v2h_A 24 MTKTAVITGST-SGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS---SGTVLHHPADMTKP 88 (281)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC---SSCEEEECCCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc---CCcEEEEeCCCCCH
Confidence 46778877754 55555544 57999999998 7777776666555332 23688999998653
No 457
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=80.16 E-value=16 Score=31.58 Aligned_cols=58 Identities=14% Similarity=0.000 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeC-CHHHHHHHHHHHHHh-CCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDL-NPDSYAWLQASIRLN-ERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~-~~~a~~~a~~N~~~n-~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.| |+|.++..+++ .|++|+.++. ++..++.+.+.+... + .++.++.+|+.+
T Consensus 10 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~ 73 (276)
T 1mxh_A 10 ECPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA----GSAVLCKGDLSL 73 (276)
T ss_dssp -CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC----CceEEEeccCCC
Confidence 456777554 55777766654 6999999999 988877766666543 3 258888888764
No 458
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=80.05 E-value=12 Score=32.12 Aligned_cols=59 Identities=19% Similarity=0.032 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.| |+|.++..+++ +|++|++++. ++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 6 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~ 69 (261)
T 1gee_A 6 EGKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG----GEAIAVKGDVTVE 69 (261)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CEEEEEECCTTSH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC----CceEEEECCCCCH
Confidence 456677555 56777766654 6899999999 8877776666665434 2588888998653
No 459
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.95 E-value=6.5 Score=35.79 Aligned_cols=41 Identities=27% Similarity=0.455 Sum_probs=31.5
Q ss_pred CCCEEEEEc-C-CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 162 EGDLVLDVF-A-GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 162 ~g~~VLDl~-~-G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+|++||=.| + |+|.+++.+|+ .|++|++++.+++.++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 789998774 2 34556666666 68899999999998888765
No 460
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=79.92 E-value=12 Score=32.39 Aligned_cols=59 Identities=10% Similarity=-0.023 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEE-eCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAAN-DLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~av-D~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+++++|=.|+ +|.++..++ +.|++|+.+ +.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 66 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG----VKVLVVKANVGQP 66 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT----CCEEEEECCTTCH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 4667776664 566665555 479998886 889888877776665444 3688999998653
No 461
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=79.25 E-value=9.8 Score=32.94 Aligned_cols=59 Identities=19% Similarity=0.089 Sum_probs=40.4
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEE-eCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAAN-DLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~av-D~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.+ +.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 70 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG----RSALAIKADLTNA 70 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT----SCCEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEcCCCCH
Confidence 46788877765 4455444 4579999888 777777766666665444 3688999998653
No 462
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=79.17 E-value=10 Score=33.32 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=38.6
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+. .+ .++.++.+|+.+.
T Consensus 4 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~----~~~~~~~~Dv~~~ 63 (281)
T 3zv4_A 4 TGEVALITGGA-SGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HG----GNAVGVVGDVRSL 63 (281)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TB----TTEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---cC----CcEEEEEcCCCCH
Confidence 46778877765 5555544 45799999999999877654432 22 3688899998653
No 463
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=78.93 E-value=7.4 Score=34.32 Aligned_cols=59 Identities=17% Similarity=0.050 Sum_probs=39.9
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHH-------HHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPD-------SYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~-------a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..+ ++.|++|+.++.++. .++.+.+.+...+ .++.++.+|+.+.
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 77 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG----GQALPIVGDIRDG 77 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT----SEEEEEECCTTSH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 46788877765 4455444 457999999999876 3444455555444 2588999998653
No 464
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=78.92 E-value=2 Score=38.51 Aligned_cols=42 Identities=17% Similarity=0.362 Sum_probs=33.5
Q ss_pred HHHhhccCCCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHH
Q psy16898 155 RVTKEVREGDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYA 198 (324)
Q Consensus 155 ~~~~~~~~g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~ 198 (324)
.+...+.+..+.+|+|||.|.+++.+. ..+++.+|+|++.+.
T Consensus 20 ~i~~~~p~~~~yvEpF~Ggg~V~~~~~--~~~~i~ND~n~~lin 61 (278)
T 2g1p_A 20 DIKRHLPKGECLVEPFVGAGSVFLNTD--FSRYILADINSDLIS 61 (278)
T ss_dssp HHHHHCCCCSEEEETTCTTCHHHHTCC--CSEEEEEESCHHHHH
T ss_pred HHHHhccccCeEEeeccCccHHHHhhc--ccceEEEeccHHHHH
Confidence 355556667899999999999987553 458999999998763
No 465
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=78.76 E-value=12 Score=33.85 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=40.7
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEe-CCHHHHHHHHHHHH-HhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAAND-LNPDSYAWLQASIR-LNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD-~~~~a~~~a~~N~~-~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.| |+|.++..+++ .|++|+.++ .++..++.+.+.+. ..+ .++.++.+|+.+
T Consensus 45 ~~k~~lVTG-as~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~d 108 (328)
T 2qhx_A 45 TVPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP----NSAITVQADLSN 108 (328)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC----CeEEEEEeeCCC
Confidence 456777555 55677666554 699999999 99988877766664 233 258888888754
No 466
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=78.65 E-value=15 Score=31.70 Aligned_cols=60 Identities=8% Similarity=-0.071 Sum_probs=40.6
Q ss_pred CCCEEEEEcCCC----c-hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGV----G-PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~----G-~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
.|+++|=.|++. | .++..+++.|++|+.++.++...+.+++-....+ - .++.++.+|+.+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~ 70 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--R-NDSIILPCDVTN 70 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--S-CCCEEEECCCSS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--C-CCceEEeCCCCC
Confidence 467888888653 2 2445556689999999998766665555444333 2 268899998764
No 467
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=78.61 E-value=2.3 Score=38.28 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHhhccC-CCEEEEEcCCCchhHHHHHhcCCEEEEEeCCHHHHHHH
Q psy16898 156 VTKEVRE-GDLVLDVFAGVGPFSIPAARRGAIVAANDLNPDSYAWL 200 (324)
Q Consensus 156 ~~~~~~~-g~~VLDl~~G~G~~al~~a~~g~~V~avD~~~~a~~~a 200 (324)
+...+++ ..+.+|+|||.|.+++.+. ...++.+|+|++.+..-
T Consensus 28 i~~~lp~~~~~yvEpF~GggaV~~~~~--~~~~i~ND~n~~Lin~y 71 (284)
T 2dpm_A 28 IRELIPKTYNRYFEPFVGGGALFFDLA--PKDAVINDFNAELINCY 71 (284)
T ss_dssp HHHHSCSSCSCEEETTCTTCHHHHHHC--CSEEEEEESCHHHHHHH
T ss_pred HHHHhccccCEEEeecCCccHHHHhhh--ccceeeeecchHHHHHH
Confidence 4455555 5789999999999988763 36899999999876543
No 468
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=78.59 E-value=11 Score=32.78 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ ++|++|+.++.++..++.+.+.+ + .++.++.+|+.+.
T Consensus 29 ~~k~vlVTGas-~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~----~~~~~~~~Dl~~~ 88 (281)
T 3ppi_A 29 EGASAIVSGGA-GGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---G----NRAEFVSTNVTSE 88 (281)
T ss_dssp TTEEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C----CceEEEEcCCCCH
Confidence 56677777754 55655554 47999999999998777665544 3 2588999998664
No 469
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=78.57 E-value=2.4 Score=39.00 Aligned_cols=42 Identities=26% Similarity=0.241 Sum_probs=33.4
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
+++|++||-.|+ |+|..++.+++ .|++|++++.+++.++.++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Confidence 568999999996 56666666666 6889999999998877654
No 470
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=78.48 E-value=16 Score=31.92 Aligned_cols=59 Identities=14% Similarity=-0.050 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.| |+|.++..+++ .|++|++++.++..++.+.+.++..+ .++.++.+|+.+.
T Consensus 43 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~d~ 105 (285)
T 2c07_A 43 ENKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG----YESSGYAGDVSKK 105 (285)
T ss_dssp SSCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT----CCEEEEECCTTCH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC----CceeEEECCCCCH
Confidence 466777666 45777776665 58899999999887776666655433 2588889998653
No 471
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=78.48 E-value=17 Score=30.66 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHH-hCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRL-NERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~-n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.| |+|.++..+++ +|++|++++.++...+.+.+.+.. .+ . ++.++.+|+.+
T Consensus 6 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~--~~~~~~~D~~~ 68 (248)
T 2pnf_A 6 QGKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG--V--KAHGVEMNLLS 68 (248)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC--C--CEEEEECCTTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC--C--ceEEEEccCCC
Confidence 356666554 56777776665 689999999999887776665543 24 2 58888888765
No 472
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=78.32 E-value=15 Score=32.17 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=39.0
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|++ |.++..+ ++.|++|+.++.+++.++.+.+. .+ .++.++.+|+.+.
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~----~~~~~~~~Dv~d~ 85 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IG----SKAFGVRVDVSSA 85 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HC----TTEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC----CceEEEEecCCCH
Confidence 56788877765 5555554 45799999999999876655443 23 2588888988653
No 473
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=78.26 E-value=13 Score=32.91 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=38.9
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeCCHH-HHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDLNPD-SYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~~~~-a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=.|++ |.++..+ ++.|++|+.++.++. ..+.+.+-++..+ .++.++.+|+.+.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 109 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----VKCVLLPGDLSDE 109 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT----CCEEEEESCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 56788877765 5555554 457999999998865 3444444344333 3688999998653
No 474
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=78.23 E-value=1.5 Score=40.10 Aligned_cols=43 Identities=30% Similarity=0.394 Sum_probs=34.9
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQA 202 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~~ 202 (324)
+++|++||-.|+ |+|..++.+|+ .|++|++++.+++..+.+++
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 568999998886 56777777776 68899999999988887764
No 475
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=78.06 E-value=18 Score=30.49 Aligned_cols=57 Identities=12% Similarity=-0.001 Sum_probs=39.8
Q ss_pred CEEEEEcCCCchhHHHHHh----cCCEEEE-EeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 164 DLVLDVFAGVGPFSIPAAR----RGAIVAA-NDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 164 ~~VLDl~~G~G~~al~~a~----~g~~V~a-vD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++|| +-.|+|.++..+++ .|++|++ .+.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 63 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG----GQAITFGGDVSKE 63 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT----CEEEEEECCTTSH
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEeCCCCCH
Confidence 4555 44567888877665 6899998 4888887777666665444 2588888998653
No 476
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=77.66 E-value=12 Score=31.66 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=39.5
Q ss_pred CCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.| |+|.++..+++ +|++|++++.++..++.+.+.+. .. ...++.++.+|+.+.
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~~~D~~~~ 64 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HA--YADKVLRVRADVADE 64 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHS-TT--TGGGEEEEECCTTCH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-Hh--cCCcEEEEEecCCCH
Confidence 45666666 45777766654 68999999999987766555441 11 123688899998653
No 477
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=77.64 E-value=10 Score=33.59 Aligned_cols=61 Identities=13% Similarity=0.006 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCC---EEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGA---IVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~---~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |+++..+|+ .|+ .|+.++.+++.++.+.+.+.... -..++.++.+|+.+.
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~d~ 99 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF--PNAKVHVAQLDITQA 99 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC--TTCEEEEEECCTTCG
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC--CCCeEEEEECCCCCH
Confidence 57788877754 566655554 566 99999999999888877776542 123688899998653
No 478
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=77.22 E-value=9.1 Score=33.58 Aligned_cols=58 Identities=22% Similarity=0.113 Sum_probs=37.2
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++.. +++.|++|+.++.++. .+...+.+...+ .++.++.+|+.+.
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~----~~~~~~~~Dv~d~ 91 (273)
T 3uf0_A 30 AGRTAVVTGAG-SGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG----GSAEAVVADLADL 91 (273)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTT----CEEEEEECCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcC----CcEEEEEecCCCH
Confidence 57788887765 445544 4557999999995544 333333343333 3688999998664
No 479
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=77.14 E-value=15 Score=31.85 Aligned_cols=60 Identities=20% Similarity=0.145 Sum_probs=42.3
Q ss_pred cCCCEEEEEcCCCchhHHHHHh----cCCEEEEE-eCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 161 REGDLVLDVFAGVGPFSIPAAR----RGAIVAAN-DLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 161 ~~g~~VLDl~~G~G~~al~~a~----~g~~V~av-D~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++||=.| |+|.++..+++ .|++|+.+ ..+++..+.+.+.+...+ .++.++.+|+.+.
T Consensus 24 ~~~k~vlITG-as~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~ 88 (272)
T 4e3z_A 24 SDTPVVLVTG-GSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG----GEAVAIPGDVGNA 88 (272)
T ss_dssp CCSCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CEEEEEECCTTCH
T ss_pred cCCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 3566777666 55666666554 68988766 788888887777776554 2688999998653
No 480
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=77.08 E-value=15 Score=31.20 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.|++ |.++..++ +.|++|+.++.+++.++.+.+.+ + - ++.++.+|+.+.
T Consensus 3 ~k~vlVTGas-~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~--~~~~~~~D~~~~ 61 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---G--N--AVIGIVADLAHH 61 (235)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--G--GEEEEECCTTSH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c--C--CceEEECCCCCH
Confidence 4567766654 55555544 47999999999998877665544 2 1 478888888653
No 481
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=77.07 E-value=24 Score=30.28 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ .|++|++++.++..++.+.+.+.... -..++.++.+|+.+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~ 70 (260)
T 2z1n_A 6 QGKLAVVTAG-SSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV--SGAQVDIVAGDIREP 70 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--TTCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCCeEEEEEccCCCH
Confidence 4567777765 4666665554 69999999999988777666554331 011588888998653
No 482
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=77.07 E-value=14 Score=32.04 Aligned_cols=59 Identities=20% Similarity=0.184 Sum_probs=38.7
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEe-CCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAAND-LNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD-~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ .|++|+.++ .+....+.........+ .++.++.+|+.+.
T Consensus 24 ~~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~ 87 (269)
T 3gk3_A 24 AKRVAFVTG-GMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG----RDFKAYAVDVADF 87 (269)
T ss_dssp CCCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT----CCCEEEECCTTCH
T ss_pred cCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC----CceEEEEecCCCH
Confidence 456677555 55666665554 689999998 66666655554444333 3688999998654
No 483
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=76.94 E-value=15 Score=32.57 Aligned_cols=59 Identities=24% Similarity=0.091 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCC--HHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLN--PDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~--~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+|+++|=.|++ |.++..++ +.|++|+.++.+ ....+.+.+-+...+ .++.++.+|+.+.
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~ 112 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG----RKAVLLPGDLSDE 112 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT----CCEEECCCCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC----CcEEEEEecCCCH
Confidence 46788877754 55665554 479999999987 344555555555444 3688899998653
No 484
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=76.92 E-value=9.4 Score=33.32 Aligned_cols=56 Identities=25% Similarity=0.162 Sum_probs=38.6
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++.. +++.|++|+.+|.++..++.+.+.+ + - ++.++.+|+.+.
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~--~~~~~~~Dv~~~ 69 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G--R--GAVHHVVDLTNE 69 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---C--T--TCEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C--C--CeEEEECCCCCH
Confidence 46778877765 455544 4557999999999987766655443 3 2 477888888653
No 485
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=76.68 E-value=9.8 Score=33.43 Aligned_cols=58 Identities=16% Similarity=0.058 Sum_probs=39.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCH-HHHHHHHHHHH-HhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNP-DSYAWLQASIR-LNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~-~a~~~a~~N~~-~n~~~l~~~v~~~~~D~~~ 224 (324)
.++++|=.|+ +|.++..+++ .|++|+.++.++ ..++.+.+.+. ..+ .++.++.+|+.+
T Consensus 22 ~~k~~lVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 22 EAPAAVVTGA-AKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS----NTAVVCQADLTN 85 (288)
T ss_dssp CCCEEEETTC-SSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSC
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC----CceEEEEeecCC
Confidence 4667776665 5666665554 699999999997 66666655554 223 258888888765
No 486
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.57 E-value=13 Score=31.93 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=39.9
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHH-HHHHHHHHHHh-CCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDS-YAWLQASIRLN-ERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a-~~~a~~N~~~n-~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..+++ .|++|+.++.++.. ++.+.+.+... + . ++.++.+|+.+.
T Consensus 3 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~--~~~~~~~D~~~~ 67 (260)
T 1x1t_A 3 KGKVAVVTG-STSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--V--KVLYDGADLSKG 67 (260)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--S--CEEEECCCTTSH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC--C--cEEEEECCCCCH
Confidence 356666555 45667666554 69999999998876 66665555433 4 2 588888898653
No 487
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.53 E-value=10 Score=33.04 Aligned_cols=62 Identities=10% Similarity=0.021 Sum_probs=40.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.|+ +|.++..+++ +|++|++++.++..++.+.+.+..... ...++.++.+|+.+.
T Consensus 5 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~ 70 (278)
T 1spx_A 5 AEKVAIITGS-SNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV-SEQNVNSVVADVTTD 70 (278)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc-CCCceeEEecccCCH
Confidence 3556665554 5666665554 799999999999887776655532110 123688888998653
No 488
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=76.48 E-value=6.6 Score=33.09 Aligned_cols=45 Identities=13% Similarity=0.012 Sum_probs=33.1
Q ss_pred CCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 171 AGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 171 ~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
||.|.+|..+++ .|..|+.+|.+++.++.+.+. .+ +.++.+|+.+
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~------~~~i~gd~~~ 54 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK------ATIIHGDGSH 54 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS------SEEEESCTTS
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC------CeEEEcCCCC
Confidence 566888888776 578999999999987764321 12 5678888865
No 489
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=76.42 E-value=12 Score=31.77 Aligned_cols=57 Identities=21% Similarity=0.184 Sum_probs=39.2
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARD 224 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~ 224 (324)
+++++|=.| |+|.++..+++ .|++|++++.++...+.+.+.+. . . .++.++.+|+.+
T Consensus 5 ~~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~-~~~~~~~~D~~~ 65 (251)
T 1zk4_A 5 DGKVAIITG-GTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG--T--P-DQIQFFQHDSSD 65 (251)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--C--T-TTEEEEECCTTC
T ss_pred CCcEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--c--c-CceEEEECCCCC
Confidence 356666555 56777766655 68999999999887665544432 1 1 368899999865
No 490
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=76.37 E-value=0.94 Score=40.83 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=24.5
Q ss_pred CeEEEeccHHHHHHHHHHHhhhhhcccCCCCCCCCcccEEEECChhh
Q psy16898 214 PISATQKDARDFLQTDARAHLVRWSQSEGNSTGGTAVARVIMNLPAT 260 (324)
Q Consensus 214 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vi~npP~~ 260 (324)
+++++++|+.+++.... ..+||+|++|||+.
T Consensus 21 ~~~i~~gD~~~~l~~l~----------------~~s~DlIvtdPPY~ 51 (297)
T 2zig_A 21 VHRLHVGDAREVLASFP----------------EASVHLVVTSPPYW 51 (297)
T ss_dssp CEEEEESCHHHHHTTSC----------------TTCEEEEEECCCCC
T ss_pred CCEEEECcHHHHHhhCC----------------CCceeEEEECCCCC
Confidence 67899999999765421 24599999999994
No 491
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=76.24 E-value=10 Score=33.10 Aligned_cols=59 Identities=22% Similarity=0.117 Sum_probs=39.0
Q ss_pred CCCEEEEEcCCCchhHHH----HHhcCCEEEEEeCCHHH-------HHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIP----AARRGAIVAANDLNPDS-------YAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~----~a~~g~~V~avD~~~~a-------~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++.. +++.|++|+.++.++.. ++.+.+.+...+ .++.++.+|+.+.
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 74 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG----GQGLALKCDIREE 74 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT----SEEEEEECCTTCH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC----CeEEEEeCCCCCH
Confidence 46778877766 555544 44579999999988652 444444444444 2688999998653
No 492
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=76.05 E-value=20 Score=30.48 Aligned_cols=58 Identities=19% Similarity=0.039 Sum_probs=39.1
Q ss_pred CCEEEEEcCCCchhHHHHHh----cCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 163 GDLVLDVFAGVGPFSIPAAR----RGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 163 g~~VLDl~~G~G~~al~~a~----~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++++|=.| |+|.++..+++ .|++|+.++. +++..+.+.+.+...+ . ++.++.+|+.+.
T Consensus 4 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~Dv~d~ 66 (246)
T 3osu_A 4 TKSALVTG-ASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG--V--DSFAIQANVADA 66 (246)
T ss_dssp SCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--S--CEEEEECCTTCH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--C--cEEEEEccCCCH
Confidence 45566544 55666665554 7999988877 6666766666666555 2 588899998653
No 493
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=75.95 E-value=18 Score=31.33 Aligned_cols=59 Identities=20% Similarity=0.213 Sum_probs=40.2
Q ss_pred CCCEEEEEcCCCchhHHHH----HhcCCEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPA----ARRGAIVAANDL-NPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~----a~~g~~V~avD~-~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..+ ++.|++|+.++. +....+.+.+.++..+ .++.++.+|+.+.
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~ 80 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG----SDAIAIKADIRQV 80 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCH
Confidence 56778877755 5555554 457999998776 4666666666666555 2688999998654
No 494
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=75.68 E-value=18 Score=31.47 Aligned_cols=56 Identities=21% Similarity=0.150 Sum_probs=38.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.|+++|=.|++ |.++..++ +.|++|+.++.+++.++.+.+. .+ .++.++.+|+.+.
T Consensus 26 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~----~~~~~~~~Dv~d~ 85 (266)
T 3grp_A 26 TGRKALVTGAT-GGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LG----KDVFVFSANLSDR 85 (266)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HC----SSEEEEECCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC----CceEEEEeecCCH
Confidence 56777766654 55655554 4799999999999877665432 23 2588999998653
No 495
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=75.49 E-value=14 Score=32.40 Aligned_cols=56 Identities=16% Similarity=-0.000 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCCchhHHHHH----hcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAA----RRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a----~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.++++|=.| |+|.++..++ +.|++|+.++.+++.++.+.+.+ + .++.++.+|+.+.
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~d~ 86 (272)
T 4dyv_A 27 GKKIAIVTG-AGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G----DDALCVPTDVTDP 86 (272)
T ss_dssp -CCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T----SCCEEEECCTTSH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C----CCeEEEEecCCCH
Confidence 456666555 4566665554 47999999999998776655443 2 2578888988653
No 496
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=75.40 E-value=16 Score=31.50 Aligned_cols=58 Identities=19% Similarity=0.126 Sum_probs=39.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
.+++||=.|+ +|.++..+++ +|++|++++.++...+.+.+.+ + -.+++.++.+|+.+.
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~~~D~~~~ 76 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI---G--SPDVISFVHCDVTKD 76 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--CTTTEEEEECCTTCH
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh---C--CCCceEEEECCCCCH
Confidence 4677886664 6777766654 6899999999987665444333 2 112688999998653
No 497
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=75.34 E-value=15 Score=32.17 Aligned_cols=54 Identities=17% Similarity=0.090 Sum_probs=36.4
Q ss_pred CEEEEEcCCCc---hhHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 164 DLVLDVFAGVG---PFSIPAARRGAIVAANDLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 164 ~~VLDl~~G~G---~~al~~a~~g~~V~avD~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
++||=-|++.| .++..+++.|++|+.+|.+++..+.+.+ .+ . ++.++.+|+.+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~---~-~~~~~~~Dv~~~ 59 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ER---P-NLFYFHGDVADP 59 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TC---T-TEEEEECCTTSH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hc---C-CEEEEEecCCCH
Confidence 46776666655 3445556689999999999876654322 22 2 688889998653
No 498
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=75.34 E-value=2.8 Score=38.44 Aligned_cols=42 Identities=31% Similarity=0.361 Sum_probs=32.5
Q ss_pred ccCCCEEEEEcC--CCchhHHHHHh-cCCEEEEEeCCHHHHHHHH
Q psy16898 160 VREGDLVLDVFA--GVGPFSIPAAR-RGAIVAANDLNPDSYAWLQ 201 (324)
Q Consensus 160 ~~~g~~VLDl~~--G~G~~al~~a~-~g~~V~avD~~~~a~~~a~ 201 (324)
+.+|++||-.|+ |+|..++.+++ .|++|++++.+++.++.++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 568999998873 45666665555 6889999999998888773
No 499
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=75.33 E-value=7.7 Score=35.61 Aligned_cols=63 Identities=16% Similarity=0.074 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCCchhHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhCC-----------------C-CCCCeEEEecc
Q psy16898 162 EGDLVLDVFAGVGPFSIPAARR--GAIVAANDLNPDSYAWLQASIRLNER-----------------Q-VKTPISATQKD 221 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~~--g~~V~avD~~~~a~~~a~~N~~~n~~-----------------~-l~~~v~~~~~D 221 (324)
+...|+.||||..+.+..+... +..++-||. |+.++.-++-+..++. . ..++..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999999999874 458888888 8887776666554310 0 02478999999
Q ss_pred HHHH
Q psy16898 222 ARDF 225 (324)
Q Consensus 222 ~~~~ 225 (324)
+++.
T Consensus 176 L~d~ 179 (334)
T 1rjd_A 176 LNDI 179 (334)
T ss_dssp TTCH
T ss_pred CCCc
Confidence 9863
No 500
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=75.17 E-value=15 Score=30.97 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=39.6
Q ss_pred CCCEEEEEcCCCchhHHHHHh----cCCEEEEE-eCCHHHHHHHHHHHHHhCCCCCCCeEEEeccHHHH
Q psy16898 162 EGDLVLDVFAGVGPFSIPAAR----RGAIVAAN-DLNPDSYAWLQASIRLNERQVKTPISATQKDARDF 225 (324)
Q Consensus 162 ~g~~VLDl~~G~G~~al~~a~----~g~~V~av-D~~~~a~~~a~~N~~~n~~~l~~~v~~~~~D~~~~ 225 (324)
+++++|=.| |+|.++..+++ +|++|+++ +.++...+.+.+.+...+ .++.++.+|+.+.
T Consensus 4 ~~~~vlItG-asggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 67 (247)
T 2hq1_A 4 KGKTAIVTG-SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG----INVVVAKGDVKNP 67 (247)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT----CCEEEEESCTTSH
T ss_pred CCcEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC----CcEEEEECCCCCH
Confidence 356677555 55777766654 68999999 667666666555555444 2588999998653
Done!