Query psy169
Match_columns 280
No_of_seqs 171 out of 1031
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 16:33:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.7 5.3E-17 1.8E-21 132.0 10.5 99 158-267 15-115 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.6 5.5E-16 1.9E-20 128.0 10.3 113 156-278 22-143 (155)
3 1ktg_A Diadenosine tetraphosph 99.6 2.6E-15 8.7E-20 120.4 10.1 101 157-267 17-121 (138)
4 3shd_A Phosphatase NUDJ; nudix 99.6 3E-15 1E-19 122.5 10.1 110 158-278 16-132 (153)
5 3grn_A MUTT related protein; s 99.6 5.1E-15 1.7E-19 121.4 11.5 108 158-277 20-134 (153)
6 3gwy_A Putative CTP pyrophosph 99.6 7.9E-15 2.7E-19 118.5 12.0 105 158-274 17-127 (140)
7 3son_A Hypothetical nudix hydr 99.6 1.3E-15 4.5E-20 124.2 6.7 101 156-267 18-127 (149)
8 1vcd_A NDX1; nudix protein, di 99.6 1.2E-14 4.2E-19 114.7 11.6 94 159-267 15-110 (126)
9 4dyw_A MUTT/nudix family prote 99.6 1.5E-14 5.2E-19 119.6 11.8 109 158-276 40-153 (157)
10 2pbt_A AP4A hydrolase; nudix p 99.6 9.7E-15 3.3E-19 116.2 9.8 98 159-267 16-115 (134)
11 2b0v_A Nudix hydrolase; struct 99.6 1.4E-14 4.8E-19 118.1 10.8 110 159-278 20-138 (153)
12 3ees_A Probable pyrophosphohyd 99.6 1.5E-14 5.3E-19 117.4 10.6 96 158-265 33-131 (153)
13 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 4.4E-14 1.5E-18 113.8 13.0 106 160-277 27-135 (139)
14 3hhj_A Mutator MUTT protein; n 99.6 2.5E-14 8.7E-19 117.8 11.4 97 159-265 42-141 (158)
15 3id9_A MUTT/nudix family prote 99.6 3.3E-14 1.1E-18 118.6 12.1 108 158-278 34-150 (171)
16 2rrk_A ORF135, CTP pyrophospho 99.5 1.5E-14 5.3E-19 115.9 9.4 107 158-276 20-130 (140)
17 1mut_A MUTT, nucleoside tripho 99.5 7.7E-15 2.6E-19 115.9 6.8 96 158-265 16-114 (129)
18 3exq_A Nudix family hydrolase; 99.5 2.6E-14 9E-19 118.7 10.4 109 159-277 24-135 (161)
19 3oga_A Nucleoside triphosphata 99.5 1.1E-13 3.7E-18 114.8 13.8 111 159-274 40-160 (165)
20 3r03_A Nudix hydrolase; struct 99.5 2.6E-14 8.8E-19 115.3 9.5 97 159-265 21-120 (144)
21 3eds_A MUTT/nudix family prote 99.5 2.9E-14 1E-18 117.3 10.0 96 159-266 34-137 (153)
22 3f6a_A Hydrolase, nudix family 99.5 8.8E-14 3E-18 114.8 12.7 99 158-265 17-134 (159)
23 3gg6_A Nudix motif 18, nucleos 99.5 8E-14 2.7E-18 114.4 12.1 95 158-267 32-133 (156)
24 3q93_A 7,8-dihydro-8-oxoguanin 99.5 4.6E-14 1.6E-18 119.4 10.8 110 158-277 36-148 (176)
25 1sjy_A MUTT/nudix family prote 99.5 6.6E-14 2.3E-18 114.7 10.9 98 159-267 26-133 (159)
26 2o1c_A DATP pyrophosphohydrola 99.5 4.5E-14 1.5E-18 114.1 9.0 113 158-277 22-146 (150)
27 3cng_A Nudix hydrolase; struct 99.5 3.7E-13 1.3E-17 114.9 14.5 107 158-278 51-162 (189)
28 2azw_A MUTT/nudix family prote 99.5 1.1E-13 3.9E-18 111.8 10.4 111 157-277 30-144 (148)
29 2b06_A MUTT/nudix family prote 99.5 1.4E-13 4.8E-18 112.6 10.0 107 159-277 24-133 (155)
30 1rya_A GDP-mannose mannosyl hy 99.5 1.7E-13 5.9E-18 112.3 9.1 104 159-264 31-138 (160)
31 2pqv_A MUTT/nudix family prote 99.5 3.2E-13 1.1E-17 110.5 10.6 101 159-271 31-137 (154)
32 3q1p_A Phosphohydrolase (MUTT/ 99.5 2E-13 6.8E-18 118.4 9.9 107 158-276 79-191 (205)
33 3fk9_A Mutator MUTT protein; s 99.4 3.3E-13 1.1E-17 115.5 10.3 111 158-277 15-128 (188)
34 3o8s_A Nudix hydrolase, ADP-ri 99.4 3.5E-13 1.2E-17 116.9 10.6 107 158-277 81-193 (206)
35 2kdv_A RNA pyrophosphohydrolas 99.4 1.1E-12 3.7E-17 109.7 12.7 105 159-266 21-137 (164)
36 3fcm_A Hydrolase, nudix family 99.4 7.2E-13 2.5E-17 113.7 11.0 105 158-267 58-170 (197)
37 1x51_A A/G-specific adenine DN 99.4 1.9E-13 6.5E-18 112.3 6.8 108 157-276 33-146 (155)
38 2fkb_A Putative nudix hydrolas 99.4 8.6E-13 2.9E-17 110.8 10.9 107 159-278 50-166 (180)
39 3fjy_A Probable MUTT1 protein; 99.4 4.7E-13 1.6E-17 125.6 9.2 107 156-268 36-162 (364)
40 3h95_A Nucleoside diphosphate- 99.4 9.6E-13 3.3E-17 113.2 10.4 97 158-265 39-141 (199)
41 1k2e_A Nudix homolog; nudix/MU 99.4 1.9E-12 6.6E-17 106.6 11.5 105 158-274 12-130 (156)
42 3f13_A Putative nudix hydrolas 99.4 3E-12 1E-16 107.4 12.4 97 159-275 28-126 (163)
43 1f3y_A Diadenosine 5',5'''-P1, 99.4 7.1E-13 2.4E-17 108.8 7.9 116 159-277 27-161 (165)
44 1q27_A Putative nudix hydrolas 99.4 1E-12 3.5E-17 109.5 8.8 110 158-279 46-169 (171)
45 3e57_A Uncharacterized protein 99.4 2.9E-13 1E-17 119.0 5.2 109 158-276 79-206 (211)
46 1vk6_A NADH pyrophosphatase; 1 99.4 5.6E-12 1.9E-16 114.5 12.7 96 158-267 151-249 (269)
47 1v8y_A ADP-ribose pyrophosphat 99.3 2.4E-12 8E-17 107.6 8.5 94 159-265 46-145 (170)
48 1hzt_A Isopentenyl diphosphate 99.3 5E-12 1.7E-16 107.6 9.6 97 159-264 45-150 (190)
49 2w4e_A MUTT/nudix family prote 99.3 1.3E-12 4.5E-17 106.5 4.8 95 160-267 19-120 (145)
50 3i9x_A MUTT/nudix family prote 99.3 4E-12 1.4E-16 108.1 7.5 106 157-272 45-164 (187)
51 1vhz_A ADP compounds hydrolase 99.3 7.8E-12 2.7E-16 107.9 9.3 97 159-267 61-163 (198)
52 2jvb_A Protein PSU1, mRNA-deca 99.3 6.3E-12 2.2E-16 101.7 8.0 106 158-278 17-137 (146)
53 2qjo_A Bifunctional NMN adenyl 99.3 6.8E-12 2.3E-16 115.5 8.3 115 158-277 214-338 (341)
54 1mk1_A ADPR pyrophosphatase; n 99.3 4.6E-12 1.6E-16 109.8 6.6 97 158-266 55-160 (207)
55 3fsp_A A/G-specific adenine gl 99.3 1.6E-11 5.5E-16 115.9 10.8 97 157-268 251-350 (369)
56 2fvv_A Diphosphoinositol polyp 99.3 1.4E-11 4.7E-16 106.2 8.9 95 157-266 53-152 (194)
57 2fb1_A Conserved hypothetical 99.2 2.9E-11 9.9E-16 106.7 10.9 99 157-265 27-129 (226)
58 2qjt_B Nicotinamide-nucleotide 99.2 1.4E-11 4.8E-16 114.1 9.2 115 158-277 219-345 (352)
59 3o6z_A GDP-mannose pyrophospha 99.2 6.9E-12 2.4E-16 107.5 6.6 98 157-267 57-169 (191)
60 1nqz_A COA pyrophosphatase (MU 99.2 7.2E-12 2.5E-16 106.8 6.2 94 159-264 49-151 (194)
61 2yvp_A NDX2, MUTT/nudix family 99.2 2.2E-12 7.6E-17 108.8 3.0 97 159-267 54-157 (182)
62 2a6t_A SPAC19A8.12; alpha/beta 99.2 5.1E-11 1.7E-15 108.1 10.0 94 158-265 114-213 (271)
63 3gz5_A MUTT/nudix family prote 99.2 7.1E-11 2.4E-15 105.1 8.7 97 157-263 36-138 (240)
64 1u20_A U8 snoRNA-binding prote 99.2 4.4E-11 1.5E-15 104.4 7.1 96 157-264 55-165 (212)
65 1g0s_A Hypothetical 23.7 kDa p 99.1 5.5E-11 1.9E-15 103.4 7.4 97 158-266 70-181 (209)
66 2fml_A MUTT/nudix family prote 99.1 2.4E-10 8.1E-15 103.6 11.2 99 157-263 55-156 (273)
67 2dsc_A ADP-sugar pyrophosphata 99.1 1.3E-10 4.6E-15 100.9 9.1 96 159-266 78-185 (212)
68 1q33_A Pyrophosphatase, ADP-ri 99.1 2.6E-10 8.8E-15 104.5 9.0 101 159-265 140-263 (292)
69 3q91_A Uridine diphosphate glu 99.0 2.5E-10 8.5E-15 100.5 6.8 87 170-266 94-190 (218)
70 2dho_A Isopentenyl-diphosphate 99.0 1.3E-09 4.3E-14 97.0 8.8 116 159-278 72-214 (235)
71 2pny_A Isopentenyl-diphosphate 99.0 1.1E-09 3.9E-14 98.0 8.3 116 159-278 83-225 (246)
72 2xsq_A U8 snoRNA-decapping enz 98.8 4.1E-09 1.4E-13 92.5 7.4 84 170-262 74-171 (217)
73 3kvh_A Protein syndesmos; NUDT 98.7 2.5E-09 8.5E-14 92.5 1.1 82 149-246 35-118 (214)
74 3dup_A MUTT/nudix family prote 98.7 2.7E-08 9.2E-13 91.6 6.9 115 158-277 133-261 (300)
75 3rh7_A Hypothetical oxidoreduc 98.6 1.1E-07 3.8E-12 88.2 10.3 97 158-279 194-293 (321)
76 3qsj_A Nudix hydrolase; struct 98.6 1E-07 3.5E-12 84.7 9.1 47 158-204 24-93 (232)
77 3bho_A Cleavage and polyadenyl 98.1 3.7E-06 1.3E-10 73.2 5.5 40 158-200 73-112 (208)
78 4fib_A Uncharacterized protein 25.0 52 0.0018 26.0 3.0 36 233-268 29-64 (129)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.70 E-value=5.3e-17 Score=132.01 Aligned_cols=99 Identities=23% Similarity=0.240 Sum_probs=75.8
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+||++++ .|.|.||||++++|||+.+||.||+.||+|+++.+. .+++.+.|.|+... ......++||
T Consensus 15 ~~vLL~~r~---~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~----~~l~~~~~~~~~~~----~~~~~~~~~f 83 (134)
T 3i7u_A 15 GEVLLIKTP---SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL----DYIGEIHYWYTLKG----ERIFKTVKYY 83 (134)
T ss_dssp TEEEEEECT---TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE----EEEEEEEEEEEETT----EEEEEEEEEE
T ss_pred CEEEEEEeC---CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEe----eeeeeeeEEecCCC----ceEEEEEEEE
Confidence 358999986 357999999999999999999999999999987642 23444444333211 0123567899
Q ss_pred EEEEeCCCCC--CCccceEeeccccccccccH
Q psy169 238 KAQYLEGDVK--DKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 238 ka~~~~G~~~--~e~~d~~WltkeEl~~~l~~ 267 (280)
.|...+|++. .++.+++|++.+|+.+++..
T Consensus 84 ~~~~~~~~~~~~~E~~~~~W~~~~e~~~~l~~ 115 (134)
T 3i7u_A 84 LMKYKEGEPRPSWEVKDAKFFPIKEAKKLLKY 115 (134)
T ss_dssp EEEEEEECCCCCTTSSEEEEEEHHHHHHHBCS
T ss_pred EEEEcCCcCcCChhheEEEEEEHHHHhhhcCC
Confidence 9999988874 57899999999999998653
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.65 E-value=5.5e-16 Score=128.00 Aligned_cols=113 Identities=21% Similarity=0.247 Sum_probs=76.0
Q ss_pred CCcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEE-EEecccceEEEEeeCCccccccccccceEE
Q psy169 156 DKHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHA-RFYGNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 156 ~~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v-~~vg~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
++..|||+|++.+ .+.|.||||+++.|||+.+||.||+.||+|+.+.. .+++.. .+.+.|+.. . ....+
T Consensus 22 ~~~e~LL~~r~~~-~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~---~~~~~~~~~---~---~~~~~ 91 (155)
T 3u53_A 22 NAIEFLLLQASDG-IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGF---KRELNYVAR---N---KPKTV 91 (155)
T ss_dssp CSEEEEEEEESSS-SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEE---EEEEEEEET---T---EEEEE
T ss_pred CCcEEEEEEecCC-CCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeE---eeeeecCCC---c---ceeEE
Confidence 3457999999864 57899999999999999999999999999997652 222211 111111111 0 23445
Q ss_pred EEEEEEEeCCCC----CCCccceEeeccccccccccH----HHHHHHHhhhh
Q psy169 235 FFFKAQYLEGDV----KDKKLEYTWAAREELPKLLLE----DYNKNISLFLM 278 (280)
Q Consensus 235 fffka~~~~G~~----~~e~~d~~WltkeEl~~~l~~----~y~~~v~~~L~ 278 (280)
+||.+....+.. ..++.+++|++.+|+.+++.. ..+.....+|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~ 143 (155)
T 3u53_A 92 IYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLC 143 (155)
T ss_dssp EEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 566666665443 247899999999999988653 24444455554
No 3
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.61 E-value=2.6e-15 Score=120.41 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=75.3
Q ss_pred CcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceE-EEEecccceEEEEeeCCccccccccccceEEE
Q psy169 157 KHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIH-ARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 157 ~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~-v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
+..+||+|++.+ .|.|.||+|+++.|||+.+||.||+.||+|+.+. +.+++ .+.+.+.|.++. ....++
T Consensus 17 ~~~vLl~~r~~~-~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~ 86 (138)
T 1ktg_A 17 KIEFLLLQASYP-PHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHE-DCHETLFYEAKG--------KPKSVK 86 (138)
T ss_dssp EEEEEEEEESST-TCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEE-EEEEEEEEEETT--------EEEEEE
T ss_pred CcEEEEEEccCC-CCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEec-cccceEEEEeCC--------CceEEE
Confidence 457999998743 5789999999999999999999999999999432 22221 234455555442 246788
Q ss_pred EEEEEEeCC-CC--CCCccceEeeccccccccccH
Q psy169 236 FFKAQYLEG-DV--KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 236 ffka~~~~G-~~--~~e~~d~~WltkeEl~~~l~~ 267 (280)
+|.|.+..+ .. ..++.++.|++.+|+.+++.+
T Consensus 87 ~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 121 (138)
T 1ktg_A 87 YWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADY 121 (138)
T ss_dssp EEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCC
T ss_pred EEEEEecCCcccCCCchhcEeEeccHHHHHHhhcc
Confidence 999998874 32 246789999999999998543
No 4
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.60 E-value=3e-15 Score=122.46 Aligned_cols=110 Identities=18% Similarity=0.228 Sum_probs=85.0
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+||++|.....+.|.||+|+++.|||+.+||.||+.||+|+++... ..++.+.|.+|.. .....++|
T Consensus 16 ~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~-------~~~~~~~f 84 (153)
T 3shd_A 16 GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ----HFIRMHQWIAPDK-------TPFLRFLF 84 (153)
T ss_dssp TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC----EEEEEEEECCTTS-------CCEEEEEE
T ss_pred CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC----cEEEEEEEecCCC-------ceEEEEEE
Confidence 358899886333568999999999999999999999999999987632 3456666766642 24567889
Q ss_pred EEEEeCCCC----CCCccceEeeccccc---cccccHHHHHHHHhhhh
Q psy169 238 KAQYLEGDV----KDKKLEYTWAAREEL---PKLLLEDYNKNISLFLM 278 (280)
Q Consensus 238 ka~~~~G~~----~~e~~d~~WltkeEl---~~~l~~~y~~~v~~~L~ 278 (280)
.|....+.. ..++.++.|++.+|+ .....+.....+..++.
T Consensus 85 ~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 85 AIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp EEECSSCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHHHH
T ss_pred EEEccccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHHHHh
Confidence 999887642 246899999999999 55566777777777764
No 5
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.60 E-value=5.1e-15 Score=121.39 Aligned_cols=108 Identities=20% Similarity=0.350 Sum_probs=83.1
Q ss_pred cEEEEEEecCC---CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEE
Q psy169 158 HLVLLIKEKLG---DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 158 ~LyLLVk~~~g---~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
..|||++|..+ ..|.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+.++. ....+
T Consensus 20 ~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~----~~~~~~~~~~~~--------~~~~~ 87 (153)
T 3grn_A 20 GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPG----DIAGQVNFELTE--------KKVIA 87 (153)
T ss_dssp CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC----SEEEEEEEECSS--------CEEEE
T ss_pred CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecc----eEEEEEEEecCC--------ceEEE
Confidence 35889988743 2578999999999999999999999999999987632 456677776654 23578
Q ss_pred EEEEEEEeCCCCC--CCccceEeeccccccccc--cHHHHHHHHhhh
Q psy169 235 FFFKAQYLEGDVK--DKKLEYTWAAREELPKLL--LEDYNKNISLFL 277 (280)
Q Consensus 235 fffka~~~~G~~~--~e~~d~~WltkeEl~~~l--~~~y~~~v~~~L 277 (280)
++|.|....|.+. .+..++.|++.+|+.++. .+....-+..++
T Consensus 88 ~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~ 134 (153)
T 3grn_A 88 IVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFD 134 (153)
T ss_dssp EEEEEEECCCCCCCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHH
T ss_pred EEEEEEecCCcEecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHh
Confidence 8899999888763 567899999999999984 444444444443
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.60 E-value=7.9e-15 Score=118.50 Aligned_cols=105 Identities=16% Similarity=0.259 Sum_probs=79.2
Q ss_pred cEEEEEEecCC----CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceE
Q psy169 158 HLVLLIKEKLG----DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAK 233 (280)
Q Consensus 158 ~LyLLVk~~~g----~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~k 233 (280)
..+||+||..+ ..|.|.||+|+++.||++.+||.||+.||+|+.+... .+++.+.+.++. ....
T Consensus 17 ~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~----~~~~~~~~~~~~--------~~~~ 84 (140)
T 3gwy_A 17 EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG----EKLLTVHHTYPD--------FEIT 84 (140)
T ss_dssp TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE----EEEEEEECCCSS--------CCEE
T ss_pred CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec----eEEEEEEEEeCC--------ceEE
Confidence 35899988743 3478999999999999999999999999999988743 345666665543 2467
Q ss_pred EEEEEEEEeCCCCC-CCccceEeecccccccc-ccHHHHHHHH
Q psy169 234 LFFFKAQYLEGDVK-DKKLEYTWAAREELPKL-LLEDYNKNIS 274 (280)
Q Consensus 234 vfffka~~~~G~~~-~e~~d~~WltkeEl~~~-l~~~y~~~v~ 274 (280)
+++|.|....|.+. .+..++.|++.+|+.++ +.+...+-++
T Consensus 85 ~~~f~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~ 127 (140)
T 3gwy_A 85 MHAFLCHPVGQRYVLKEHIAAQWLSTREMAILDWAEADKPIVR 127 (140)
T ss_dssp EEEEEEEECCSCCCCCSSCEEEEECHHHHTTSCBCGGGHHHHH
T ss_pred EEEEEEEecCCcccccccceeEeccHHHHhhCCCCcccHHHHH
Confidence 89999999888764 46789999999999998 4443333333
No 7
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.59 E-value=1.3e-15 Score=124.21 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=73.8
Q ss_pred CCcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEE-----EeeCCcccccccccc
Q psy169 156 DKHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFY-----KFKYPKSLQAESNVV 230 (280)
Q Consensus 156 ~~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~-----~~~yp~~~~~~~~~~ 230 (280)
++..+||+++.. .|.|.||+|+++.|||+.+||.||+.||+|+++....+.. .+++ .|.|+.. .
T Consensus 18 ~~~~vLl~~r~~--~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~~~~~~~~~-------~ 86 (149)
T 3son_A 18 ANYQFGVLHRTD--ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSL--DSHASIPNFHFSFNKP-------Y 86 (149)
T ss_dssp SSEEEEEEEESS--SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEE--EEEEEEEGGGTCSSSC-------S
T ss_pred CCeEEEEEEEcC--CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEE--EeeecccceeeccCCc-------e
Confidence 345799999884 3789999999999999999999999999999876421110 1111 1222221 2
Q ss_pred ceEEEEEEEEEe--CCCCC--CCccceEeeccccccccccH
Q psy169 231 GAKLFFFKAQYL--EGDVK--DKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 231 g~kvfffka~~~--~G~~~--~e~~d~~WltkeEl~~~l~~ 267 (280)
...+++|.|... .|.+. .++.++.|++.+|+.+++..
T Consensus 87 ~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 127 (149)
T 3son_A 87 VVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEW 127 (149)
T ss_dssp EEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCC
T ss_pred EeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcC
Confidence 356788999988 45553 57899999999999998543
No 8
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.58 E-value=1.2e-14 Score=114.66 Aligned_cols=94 Identities=22% Similarity=0.319 Sum_probs=74.4
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFK 238 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffk 238 (280)
.+||+|+.. |.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.|.++. ....+++|.
T Consensus 15 ~vLl~~r~~---g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~----~~~~~~~~~~~~--------~~~~~~~~~ 79 (126)
T 1vcd_A 15 EVLLLRDRM---GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVL----LPLYPTRYVNPK--------GVEREVHWF 79 (126)
T ss_dssp CEEEEECTT---SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEE----EEEEEEEEECTT--------SCEEEEEEE
T ss_pred EEEEEEECC---CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeec----cEEeEEEEecCC--------ceEEEEEEE
Confidence 588999874 68999999999999999999999999999987643 345666665532 235678888
Q ss_pred EEEeCCCC--CCCccceEeeccccccccccH
Q psy169 239 AQYLEGDV--KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 239 a~~~~G~~--~~e~~d~~WltkeEl~~~l~~ 267 (280)
+....|.. ..++.++.|++.+|+.+++.+
T Consensus 80 ~~~~~~~~~~~~e~~~~~w~~~~el~~~~~~ 110 (126)
T 1vcd_A 80 LMRGEGAPRLEEGMTGAGWFSPEEARALLAF 110 (126)
T ss_dssp EEEEESCCCCCTTCCEEEEECHHHHHHHBCS
T ss_pred EEEcCCCCCCCcceeeeEEcCHHHHHHhhcC
Confidence 88877664 246789999999999997654
No 9
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.57 E-value=1.5e-14 Score=119.65 Aligned_cols=109 Identities=18% Similarity=0.233 Sum_probs=83.4
Q ss_pred cEEEEEEecCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
..|||+++... ..+.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+.++.. . ....+++
T Consensus 40 ~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~---~---~~~~~~~ 109 (157)
T 4dyw_A 40 GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA----TLLCVVDHIDAAN---G---EHWVAPV 109 (157)
T ss_dssp TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC----EEEEEEEEEETTT---T---EEEEEEE
T ss_pred CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC----cEEEEEEeeccCC---C---cEEEEEE
Confidence 35899988743 3578999999999999999999999999999987632 3455555554321 0 2356788
Q ss_pred EEEEEeCCCCC----CCccceEeeccccccccccHHHHHHHHhh
Q psy169 237 FKAQYLEGDVK----DKKLEYTWAAREELPKLLLEDYNKNISLF 276 (280)
Q Consensus 237 fka~~~~G~~~----~e~~d~~WltkeEl~~~l~~~y~~~v~~~ 276 (280)
|.|....+.+. .++.++.|++.+|+.+.+.+.....|..+
T Consensus 110 f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~l~~~~~~~l~~l 153 (157)
T 4dyw_A 110 YLAHAFSGEPRVVEPDRHEALGWFALDDLPQPLTHATRIALEQV 153 (157)
T ss_dssp EEESEEESCCCCSCTTTEEEEEEEETTSCCSSBCHHHHHHHHHH
T ss_pred EEEEEcCCCcccCCCCcEeEEEEECHHHcccccCHHHHHHHHHH
Confidence 99988877762 45789999999999998888766666554
No 10
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.57 E-value=9.7e-15 Score=116.24 Aligned_cols=98 Identities=23% Similarity=0.239 Sum_probs=76.5
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFK 238 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffk 238 (280)
.+||+++.. |.|.||+|+++.|||+.+||.||+.||+|+++... .+++.+.+.|+... ......+++|.
T Consensus 16 ~vLl~~r~~---~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~ 84 (134)
T 2pbt_A 16 EVLLIKTPS---NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL----DYIGEIHYWYTLKG----ERIFKTVKYYL 84 (134)
T ss_dssp EEEEEECTT---SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE----EEEEEEEEEEEETT----EEEEEEEEEEE
T ss_pred EEEEEEeCC---CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe----eeeeEEEEEeeCCC----cEEEEEEEEEE
Confidence 689999873 78999999999999999999999999999987642 35556555544311 00235789999
Q ss_pred EEEeCCCCC--CCccceEeeccccccccccH
Q psy169 239 AQYLEGDVK--DKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 239 a~~~~G~~~--~e~~d~~WltkeEl~~~l~~ 267 (280)
+....+.+. .++.++.|++.+|+.+++.+
T Consensus 85 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 115 (134)
T 2pbt_A 85 MKYKEGEPRPSWEVKDAKFFPIKEAKKLLKY 115 (134)
T ss_dssp EEEEEECCCCCTTSSEEEEEEHHHHHHHCCS
T ss_pred EEecCCCcCCCcceeEEEEEcHHHHHhhhcc
Confidence 999877653 47899999999999997543
No 11
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.56 E-value=1.4e-14 Score=118.06 Aligned_cols=110 Identities=17% Similarity=0.197 Sum_probs=82.4
Q ss_pred EEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 159 LVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 159 LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
.+||+++.... .+.|.||+|+++.|||+.+||.||+.||+|+++... .+++.+.|.+|.. . .....++|
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~----~~~~~~~~~~~~~---~---~~~~~~~f 89 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE----VLTGIYHWTCASN---G---TTYLRFTF 89 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE----EEEEEEEEEETTT---T---EEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc----eEEEEEEEeCCCC---C---cEEEEEEE
Confidence 58899887544 568999999999999999999999999999987742 3456666665541 1 12456788
Q ss_pred EEEEeCCCC----CCCccceEeecccccccc----ccHHHHHHHHhhhh
Q psy169 238 KAQYLEGDV----KDKKLEYTWAAREELPKL----LLEDYNKNISLFLM 278 (280)
Q Consensus 238 ka~~~~G~~----~~e~~d~~WltkeEl~~~----l~~~y~~~v~~~L~ 278 (280)
.|....+.. ..++.++.|++.+|+.++ ..+.....+..++.
T Consensus 90 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~~ 138 (153)
T 2b0v_A 90 SGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHA 138 (153)
T ss_dssp EEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHHT
T ss_pred EEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHHh
Confidence 898876543 246789999999999985 34456666666654
No 12
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.56 E-value=1.5e-14 Score=117.41 Aligned_cols=96 Identities=22% Similarity=0.369 Sum_probs=76.4
Q ss_pred cEEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 158 HLVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 158 ~LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
..+||++|..++ .|.|.||+|+++.||++.+||.||+.||+|+.+... ..++.+.+.|+. ....++
T Consensus 33 ~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~----~~~~~~~~~~~~--------~~~~~~ 100 (153)
T 3ees_A 33 GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVG----ELKLACTHSYGD--------VGILIL 100 (153)
T ss_dssp TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECC----CEEEEEEEEETT--------EEEEEE
T ss_pred CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccC----ceEEEEEEecCC--------CeEEEE
Confidence 358999987432 578999999999999999999999999999977632 245556665543 235689
Q ss_pred EEEEEEeCCCCC-CCccceEeeccccccccc
Q psy169 236 FFKAQYLEGDVK-DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 236 ffka~~~~G~~~-~e~~d~~WltkeEl~~~l 265 (280)
+|.+....+.+. .+..++.|++.+|+.++.
T Consensus 101 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 131 (153)
T 3ees_A 101 FYEILYWKGEPRAKHHMMLEWIHPEELKHRN 131 (153)
T ss_dssp EEEECEEESCCCCSSSSEEEEECGGGGGGSC
T ss_pred EEEEEECCCCcCCCccceEEEecHHHhhhCC
Confidence 999998888764 567899999999999973
No 13
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.56 E-value=4.4e-14 Score=113.82 Aligned_cols=106 Identities=23% Similarity=0.268 Sum_probs=75.6
Q ss_pred EEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEEE
Q psy169 160 VLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFKA 239 (280)
Q Consensus 160 yLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffka 239 (280)
+||++|..+ .+.|.||+|+++.|||+.+||.||+.||+|+.+... ..++.+. +|... .. ....+++|.|
T Consensus 27 vLl~~r~~~-~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~----~~~~~~~--~~~~~--~~--~~~~~~~f~~ 95 (139)
T 2yyh_A 27 IVLIERKYP-PVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH----KLMGVYS--DPERD--PR--AHVVSVVWIG 95 (139)
T ss_dssp EEEEEECSS-SCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE----EEEEEEC--CTTSC--TT--SCEEEEEEEE
T ss_pred EEEEEecCC-CCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc----eEEEEEC--CCCcC--CC--ceEEEEEEEE
Confidence 899998743 234999999999999999999999999999987642 2344333 33221 10 2357888999
Q ss_pred EEeCCCCC--CCccceEeecccccc-ccccHHHHHHHHhhh
Q psy169 240 QYLEGDVK--DKKLEYTWAAREELP-KLLLEDYNKNISLFL 277 (280)
Q Consensus 240 ~~~~G~~~--~e~~d~~WltkeEl~-~~l~~~y~~~v~~~L 277 (280)
.. .|.+. .++.++.|++.+|+. +.+..+..+.|..+|
T Consensus 96 ~~-~~~~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l 135 (139)
T 2yyh_A 96 DA-QGEPKAGSDAKKVKVYRLEEIPLDKLVFDHKKIILDFL 135 (139)
T ss_dssp EE-ESCCCCCTTEEEEEEECTTSCCGGGBCTTHHHHHHHHH
T ss_pred ec-CCccCCCCCcceEEEEEHHHCCHhhcCCCHHHHHHHHH
Confidence 88 56653 467899999999999 333344555555554
No 14
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.55 E-value=2.5e-14 Score=117.81 Aligned_cols=97 Identities=23% Similarity=0.327 Sum_probs=76.3
Q ss_pred EEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+||++|..++ .|.|.||+|+++.||++.+||.||+.||+|+.+... ...+++.+.+.++. ....+++
T Consensus 42 ~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~~~~~~--------~~~~~~~ 111 (158)
T 3hhj_A 42 RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQAD--NLFPLTFASHGYET--------FHLLMPL 111 (158)
T ss_dssp EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGG--GCEEEEEEEEECSS--------CEEEEEE
T ss_pred EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecc--eEEEEEEEeeccCC--------cEEEEEE
Confidence 48999987433 578999999999999999999999999999987631 12335555665543 2467889
Q ss_pred EEEEEeCCCCC-CCccceEeeccccccccc
Q psy169 237 FKAQYLEGDVK-DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 237 fka~~~~G~~~-~e~~d~~WltkeEl~~~l 265 (280)
|.|....+.+. .+..++.|++.+|+.++.
T Consensus 112 ~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 141 (158)
T 3hhj_A 112 YFCSHYKGVAQGREGQNLKWIFINDLDKYP 141 (158)
T ss_dssp EEESCCBSCCCCTTSCEEEEEEGGGGGGSC
T ss_pred EEEEECCCccCCccccceEEEcHHHHhhCC
Confidence 99988877664 567899999999999973
No 15
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.55 E-value=3.3e-14 Score=118.58 Aligned_cols=108 Identities=20% Similarity=0.261 Sum_probs=77.7
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+||++|..+ .|.|.||+|+++.|||+.+||.||+.||+|+++... ..++.+.+.+.. .....++|
T Consensus 34 ~~vLL~~r~~~-~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~--------~~~~~~~~ 100 (171)
T 3id9_A 34 EKVLLVKQKVA-NRDWSLPGGRVENGETLEEAMIREMREETGLEVKIK----KLLYVCDKPDAS--------PSLLHITF 100 (171)
T ss_dssp TEEEEEECSST-TCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEE----EEEEEEEETTSS--------SCEEEEEE
T ss_pred CEEEEEEEECC-CCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccc----eEEEEEcccCCC--------CcEEEEEE
Confidence 35999998753 678999999999999999999999999999998643 234455543211 23466778
Q ss_pred EEEEeCCCCC--------CCccceEeecccccccc-ccHHHHHHHHhhhh
Q psy169 238 KAQYLEGDVK--------DKKLEYTWAAREELPKL-LLEDYNKNISLFLM 278 (280)
Q Consensus 238 ka~~~~G~~~--------~e~~d~~WltkeEl~~~-l~~~y~~~v~~~L~ 278 (280)
.+....|.+. .++.++.|++.+||.++ +.+...+.+.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~~ 150 (171)
T 3id9_A 101 LLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGLA 150 (171)
T ss_dssp EEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGGG
T ss_pred EEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhhc
Confidence 8888877652 35789999999999998 55555555555543
No 16
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.55 E-value=1.5e-14 Score=115.92 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=79.3
Q ss_pred cEEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 158 HLVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 158 ~LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
..+||+++..++ .|.|.||+|+++.||++.+||.||+.||+|+.+... .+++.+.+.++. ....++
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~----~~~~~~~~~~~~--------~~~~~~ 87 (140)
T 2rrk_A 20 GKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG----EYVASHQREVSG--------RIIHLH 87 (140)
T ss_dssp TEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC----EEEEEEEEEETT--------EEEEEE
T ss_pred CEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc----cEEEEEEEecCC--------cEEEEE
Confidence 358999886332 579999999999999999999999999999987531 345666665543 235678
Q ss_pred EEEEEEeCCCCC-CCccceEeecccccccc-ccHHHHHHHHhh
Q psy169 236 FFKAQYLEGDVK-DKKLEYTWAAREELPKL-LLEDYNKNISLF 276 (280)
Q Consensus 236 ffka~~~~G~~~-~e~~d~~WltkeEl~~~-l~~~y~~~v~~~ 276 (280)
+|.|....+.+. .++.++.|++.+|+.++ +.+...+-+..+
T Consensus 88 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 130 (140)
T 2rrk_A 88 AWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIPLLEAF 130 (140)
T ss_dssp EEEESEEEECCCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHH
T ss_pred EEEEEeeCCCcCCCccceeEEeCHHHHhhCCCChhHHHHHHHH
Confidence 888888766553 46789999999999997 444444444443
No 17
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.54 E-value=7.7e-15 Score=115.88 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=74.5
Q ss_pred cEEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 158 HLVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 158 ~LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
..+||+||..++ .|.|.||+|+++.|||+.+||.||+.||+|..+... .+++.+.+.|+. ....++
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~----~~~~~~~~~~~~--------~~~~~~ 83 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF----SLFEKLEYEFPD--------RHITLW 83 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE----CCCCCCBCCCSS--------CEEECC
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc----eEEEEEEEecCC--------ceEEEE
Confidence 468999887432 578999999999999999999999999999987642 234444444432 134578
Q ss_pred EEEEEEeCCCCC-CCccceEeeccccccccc
Q psy169 236 FFKAQYLEGDVK-DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 236 ffka~~~~G~~~-~e~~d~~WltkeEl~~~l 265 (280)
+|.|....+.+. .+..++.|++.+|+.++.
T Consensus 84 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 114 (129)
T 1mut_A 84 FWLVERWEGEPWGKEGQPGEWMSLVGLNADD 114 (129)
T ss_dssp CEEEEECSSCCCCCSSCCCEEEESSSCCTTT
T ss_pred EEEEEccCCccCCcccceeEEeCHHHccccc
Confidence 899988877664 467899999999999973
No 18
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.54 E-value=2.6e-14 Score=118.70 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=82.9
Q ss_pred EEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 159 LVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 159 LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
.+||++|..+. .|.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+.++.. . ....+++|
T Consensus 24 ~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~---~---~~~~~~~~ 93 (161)
T 3exq_A 24 RVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGV----TFCGTCEWFDDDR---Q---HRKLGLLY 93 (161)
T ss_dssp CEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCC----EEEEEEEEECSSC---S---SEEEEEEE
T ss_pred EEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCC----cEEEEEecccCCC---C---eEEEEEEE
Confidence 58999887432 457889999999999999999999999999986521 3456666655322 1 24678999
Q ss_pred EEEEeCCCCC-CCccceEeecccccccc-ccHHHHHHHHhhh
Q psy169 238 KAQYLEGDVK-DKKLEYTWAAREELPKL-LLEDYNKNISLFL 277 (280)
Q Consensus 238 ka~~~~G~~~-~e~~d~~WltkeEl~~~-l~~~y~~~v~~~L 277 (280)
.|....|.+. .+..++.|++.+|+.++ +.+...+.+..++
T Consensus 94 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 135 (161)
T 3exq_A 94 RASNFTGTLKASAEGQLSWLPITALTRENSAASLPEFLQVFT 135 (161)
T ss_dssp EECCEESCCCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHT
T ss_pred EEeccCCccCCCccceEEEeeHHHhhhCccChHHHHHHHHHh
Confidence 9988888764 46789999999999997 5555666555554
No 19
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.53 E-value=1.1e-13 Score=114.79 Aligned_cols=111 Identities=20% Similarity=0.292 Sum_probs=76.3
Q ss_pred EEEEEEecCCC---CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceE----EEEeeCCccccccccccc
Q psy169 159 LVLLIKEKLGD---KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCG----FYKFKYPKSLQAESNVVG 231 (280)
Q Consensus 159 LyLLVk~~~g~---~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g----~~~~~yp~~~~~~~~~~g 231 (280)
.+||++|.... .|.|.||+|+++.|||+.+||.||+.||+|+++...-+ .++. .+.+.|+...... ..
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~ 114 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDI--TPWTFRDDIRIKTYADGRQEE---IY 114 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEE--EEEEEEEEEEEEEC--CCEEE---EE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccce--eeeeeecceeeEecCCCCcee---EE
Confidence 58999887432 47899999999999999999999999999998764321 1111 1234455432111 12
Q ss_pred eEEEEEEEEEeCCCCC--CCccceEeecccccccc-ccHHHHHHHH
Q psy169 232 AKLFFFKAQYLEGDVK--DKKLEYTWAAREELPKL-LLEDYNKNIS 274 (280)
Q Consensus 232 ~kvfffka~~~~G~~~--~e~~d~~WltkeEl~~~-l~~~y~~~v~ 274 (280)
...++|.+....+.+. .++.++.|++.+||.++ +.+....-++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~ 160 (165)
T 3oga_A 115 MIYLIFDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLA 160 (165)
T ss_dssp EEEEEEEEEESCCCCCCCTTEEEEEEECGGGGGGSCBCHHHHHHHH
T ss_pred EEEEEEEeeccCCCccCCchheeeEEccHHHHhhCCCCHHHHHHHH
Confidence 3567888888877763 46789999999999997 5555544443
No 20
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.53 E-value=2.6e-14 Score=115.33 Aligned_cols=97 Identities=25% Similarity=0.353 Sum_probs=75.5
Q ss_pred EEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+||++|..++ .|.|.||+|+++.||++.+||.||+.||+|+.+... ...+++.+.+.++. ....+++
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~--~~~~~~~~~~~~~~--------~~~~~~~ 90 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRAS--CLAPLAFASHSYDT--------FHLLMPL 90 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGG--GCEEEEEEEEECSS--------SEEEEEE
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeecc--ceEEEEeeeccCCC--------eEEEEEE
Confidence 48899987432 578999999999999999999999999999987531 11234445555432 3467899
Q ss_pred EEEEEeCCCCC-CCccceEeeccccccccc
Q psy169 237 FKAQYLEGDVK-DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 237 fka~~~~G~~~-~e~~d~~WltkeEl~~~l 265 (280)
|.|....|.+. .+..++.|++.+||.++.
T Consensus 91 ~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 120 (144)
T 3r03_A 91 YACRSWRGRATAREGQTLAWVRAERLREYP 120 (144)
T ss_dssp EEECCCBSCCCCCSSCEEEEECGGGGGGSC
T ss_pred EEEEecCCccCCCCcceEEEEeHHHhccCC
Confidence 99998888764 567899999999999973
No 21
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.53 E-value=2.9e-14 Score=117.28 Aligned_cols=96 Identities=20% Similarity=0.379 Sum_probs=68.9
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEE-----EeeCCccccccccccceE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFY-----KFKYPKSLQAESNVVGAK 233 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~-----~~~yp~~~~~~~~~~g~k 233 (280)
.+||++|. .+.|.||+|+++.|||+.+||.||+.||+|+.+... ..++.+ .+.|+.... ....
T Consensus 34 ~vLL~~r~---~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~ 101 (153)
T 3eds_A 34 EILFQYPG---GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVK----KQKGVFGGKEYRYTYSNGDE-----VEYI 101 (153)
T ss_dssp CEEEECC------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEE----EEEEEECSGGGEEECTTSCE-----EEEE
T ss_pred eEEEEEcC---CCcEECCccccCCCCCHHHHHHHHHHHHHCccceee----eEEEEecccceeeecCCCCe-----EEEE
Confidence 37888876 468999999999999999999999999999987642 233443 444554210 2346
Q ss_pred EEEEEEEEeCCCCC---CCccceEeecccccccccc
Q psy169 234 LFFFKAQYLEGDVK---DKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 234 vfffka~~~~G~~~---~e~~d~~WltkeEl~~~l~ 266 (280)
+++|.|.+..|.+. .++.++.|++.+||.++..
T Consensus 102 ~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 102 VVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEEEEEEEEEECCC-------CEEEECGGGCCCBSS
T ss_pred EEEEEEEecCCccccCCCcEEEEEEECHHHCchhcc
Confidence 88999998887763 4678999999999999843
No 22
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.53 E-value=8.8e-14 Score=114.81 Aligned_cols=99 Identities=14% Similarity=0.043 Sum_probs=73.4
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEE-Eec---------------ccceEEEEeeCCc
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHAR-FYG---------------NAPCGFYKFKYPK 221 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~-~vg---------------~~P~g~~~~~yp~ 221 (280)
..+||++++. .|.|.||||+++.|||+.+||.||+.||+|+.+... +++ ..|.....+.|+.
T Consensus 17 ~~vLL~~r~~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 94 (159)
T 3f6a_A 17 DKVLLHLHKK--AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSP 94 (159)
T ss_dssp TEEEEEECSS--SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSS
T ss_pred CEEEEEEcCC--CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccccccCccccccccCCC
Confidence 3689999873 578999999999999999999999999999987742 111 0122223333322
Q ss_pred cccccccccceEEEEEEEEEeCCCCC---CCccceEeeccccccccc
Q psy169 222 SLQAESNVVGAKLFFFKAQYLEGDVK---DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 222 ~~~~~~~~~g~kvfffka~~~~G~~~---~e~~d~~WltkeEl~~~l 265 (280)
. .....++|.|....|.+. .+..++.|++.+||.++.
T Consensus 95 ~-------~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 95 N-------HSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp S-------SCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCS
T ss_pred C-------ceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCc
Confidence 1 123558899999888763 478999999999999984
No 23
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.52 E-value=8e-14 Score=114.38 Aligned_cols=95 Identities=25% Similarity=0.370 Sum_probs=74.1
Q ss_pred cEEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
..+||+++.... .|.|.||+|+++.|||+.+||.||+.||+|+++... ..++.+.+. .+...++
T Consensus 32 ~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~----~~~~~~~~~-----------~~~~~~~ 96 (156)
T 3gg6_A 32 DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE----TLLSVEERG-----------PSWVRFV 96 (156)
T ss_dssp SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE----EEEEEEESS-----------TTEEEEE
T ss_pred CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee----eEEEEEcCC-----------CCEEEEE
Confidence 468999887422 578999999999999999999999999999987743 234444321 2356788
Q ss_pred EEEEEeCCCCC------CCccceEeeccccccccccH
Q psy169 237 FKAQYLEGDVK------DKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 237 fka~~~~G~~~------~e~~d~~WltkeEl~~~l~~ 267 (280)
|.|....|.+. .++.++.|++.+||.+.+..
T Consensus 97 f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (156)
T 3gg6_A 97 FLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRA 133 (156)
T ss_dssp EEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSC
T ss_pred EEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccc
Confidence 99988877652 46789999999999998765
No 24
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.52 E-value=4.6e-14 Score=119.39 Aligned_cols=110 Identities=25% Similarity=0.313 Sum_probs=81.2
Q ss_pred cEEEEEEecCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
..+||++|..+ ..|.|.||+|+++.|||+.+||.||+.||+|+.+.. ..+++.+.+.++... ....+++
T Consensus 36 ~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~----~~~l~~~~~~~~~~~------~~~~~~~ 105 (176)
T 3q93_A 36 QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDA----LHKVGQIVFEFVGEP------ELMDVHV 105 (176)
T ss_dssp SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESC----CEEEEEEEEEETTCS------CEEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCccee----eEEEEEEEEEcCCCC------cEEEEEE
Confidence 35889987643 267899999999999999999999999999998752 135566666654321 2356799
Q ss_pred EEEEEeCCCCC-CCccceEeecccccccc-ccHHHHHHHHhhh
Q psy169 237 FKAQYLEGDVK-DKKLEYTWAAREELPKL-LLEDYNKNISLFL 277 (280)
Q Consensus 237 fka~~~~G~~~-~e~~d~~WltkeEl~~~-l~~~y~~~v~~~L 277 (280)
|.|....|.+. .+..++.|++.+||.++ +.+....-+..++
T Consensus 106 f~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 148 (176)
T 3q93_A 106 FCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 148 (176)
T ss_dssp EEESCEESCCCCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHH
T ss_pred EEEECCCCCcCCCcceeeEEeeHHHccccccCcchHHHHHHHH
Confidence 99988888764 45678999999999976 4444444444433
No 25
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.52 E-value=6.6e-14 Score=114.71 Aligned_cols=98 Identities=23% Similarity=0.344 Sum_probs=76.5
Q ss_pred EEEEEEecC----C-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceE
Q psy169 159 LVLLIKEKL----G-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAK 233 (280)
Q Consensus 159 LyLLVk~~~----g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~k 233 (280)
.+||+++.. + ..|.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+.|+.. ....
T Consensus 26 ~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~----~~l~~~~~~~~~~-------~~~~ 94 (159)
T 1sjy_A 26 DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPV----KFLGAYLGRFPDG-------VLIL 94 (159)
T ss_dssp CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEE----EEEEEEEEECTTS-------CEEE
T ss_pred CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceee----EEEEEEecccCCC-------ceEE
Confidence 488888873 1 2578999999999999999999999999999988742 3455666555542 2357
Q ss_pred EEEEEEEEeCCC-C----CCCccceEeeccccccccccH
Q psy169 234 LFFFKAQYLEGD-V----KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 234 vfffka~~~~G~-~----~~e~~d~~WltkeEl~~~l~~ 267 (280)
+++|.|....|. + ..++.++.|++.+|+.+++.+
T Consensus 95 ~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (159)
T 1sjy_A 95 RHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAA 133 (159)
T ss_dssp EEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHT
T ss_pred EEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhc
Confidence 889999998777 4 246789999999999988544
No 26
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.51 E-value=4.5e-14 Score=114.08 Aligned_cols=113 Identities=19% Similarity=0.261 Sum_probs=78.5
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEE---EEecccceEEEE------eeCCcccccccc
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHA---RFYGNAPCGFYK------FKYPKSLQAESN 228 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v---~~vg~~P~g~~~------~~yp~~~~~~~~ 228 (280)
..+||+++..+ .|.|.||+|+++.|||+.+||.||+.||+|+.+.. .+++......|. +.|+..
T Consensus 22 ~~vLl~~r~~~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 94 (150)
T 2o1c_A 22 KRVLMLQRRDD-PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPG------ 94 (150)
T ss_dssp CEEEEEECSSS-TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECCGGGGGGBCTT------
T ss_pred CEEEEEEecCC-CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeeecccccccCCC------
Confidence 35789988743 57899999999999999999999999999997753 122221111111 112211
Q ss_pred ccceEEEEEEEEEeCCCC--CCCccceEeecccccccc-ccHHHHHHHHhhh
Q psy169 229 VVGAKLFFFKAQYLEGDV--KDKKLEYTWAAREELPKL-LLEDYNKNISLFL 277 (280)
Q Consensus 229 ~~g~kvfffka~~~~G~~--~~e~~d~~WltkeEl~~~-l~~~y~~~v~~~L 277 (280)
.....+++|.|....+.. ..++.++.|++.+|+.++ +.+.....+..++
T Consensus 95 ~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 146 (150)
T 2o1c_A 95 VTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFV 146 (150)
T ss_dssp CCEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHT
T ss_pred CcceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhhhcCHHHHHHHHHHH
Confidence 023678899999887654 247899999999999997 4445555555544
No 27
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.50 E-value=3.7e-13 Score=114.93 Aligned_cols=107 Identities=23% Similarity=0.409 Sum_probs=81.6
Q ss_pred cEEEEEEecCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
..+||+++... ..|.|.||+|+++.|||+.+||.||+.||+|+.+... ..++++.+ |. ....+++
T Consensus 51 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~~~~~~~--~~--------~~~~~~~ 116 (189)
T 3cng_A 51 NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIR----ELYAVYSL--PH--------ISQVYML 116 (189)
T ss_dssp TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE----EEEEEEEE--GG--------GTEEEEE
T ss_pred CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccc----eeEEEEec--CC--------CcEEEEE
Confidence 35889988742 2578999999999999999999999999999987743 22344333 32 2357888
Q ss_pred EEEEEeCCCCC--CCccceEeecccccc--ccccHHHHHHHHhhhh
Q psy169 237 FKAQYLEGDVK--DKKLEYTWAAREELP--KLLLEDYNKNISLFLM 278 (280)
Q Consensus 237 fka~~~~G~~~--~e~~d~~WltkeEl~--~~l~~~y~~~v~~~L~ 278 (280)
|.|....+.+. .+..++.|++.+||. .+..+.....|..++.
T Consensus 117 f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~ 162 (189)
T 3cng_A 117 FRAKLLDLDFFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYME 162 (189)
T ss_dssp EEEEECCSCCCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHH
T ss_pred EEEEeCCCccCCCccceeEEEECHHHcCcccccChHHHHHHHHHHH
Confidence 99998877653 467899999999998 5656666777776654
No 28
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.49 E-value=1.1e-13 Score=111.80 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=77.3
Q ss_pred CcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEE-eeCCccccccccccceEEE
Q psy169 157 KHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYK-FKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 157 ~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~-~~yp~~~~~~~~~~g~kvf 235 (280)
+..+||++++ .|.|.||+|+++.|||+.+||.||+.||+|+++... .+++.+. +.|+... .. .....++
T Consensus 30 ~~~vLl~~r~---~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~----~~~~~~~~~~~~~~~--~~-~~~~~~~ 99 (148)
T 2azw_A 30 NNTMVLVQAP---NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG----CYLGEADEYFYSNHR--QT-AYYNPGY 99 (148)
T ss_dssp GTEEEEEECT---TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE----EEEEEEEEEEEETTT--TE-EEEEEEE
T ss_pred CCeEEEEEcC---CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee----eEEEEEEEEEcCCCC--Cc-ceEEEEE
Confidence 3568999975 368999999999999999999999999999987642 2333332 2222110 00 0234688
Q ss_pred EEEEEEeCCCC--CCCccceEeecccccccccc-HHHHHHHHhhh
Q psy169 236 FFKAQYLEGDV--KDKKLEYTWAAREELPKLLL-EDYNKNISLFL 277 (280)
Q Consensus 236 ffka~~~~G~~--~~e~~d~~WltkeEl~~~l~-~~y~~~v~~~L 277 (280)
+|.|....+.. ..+..++.|++.+|+.+++. +....-|..++
T Consensus 100 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 100 FYVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEEEEEEEECSSCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred EEEEEcCcCCcCCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 89998876654 24678999999999999754 44555555544
No 29
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.48 E-value=1.4e-13 Score=112.65 Aligned_cols=107 Identities=15% Similarity=0.259 Sum_probs=75.0
Q ss_pred EEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 159 LVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 159 LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
.+||++|..+. .| |.||+|+++.|||+.+||.||+.||+|+.+.. ..+++.+.+.++.. ....+++|
T Consensus 24 ~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~----~~~~~~~~~~~~~~-------~~~~~~~~ 91 (155)
T 2b06_A 24 VMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQN----PQLVGIKNWPLDTG-------GRYIVICY 91 (155)
T ss_dssp EEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEES----CEEEEEEEEECTTS-------CEEEEEEE
T ss_pred EEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccC----CcEEEEEeeccCCC-------ceEEEEEE
Confidence 46777766432 34 89999999999999999999999999997762 13455555544211 23568889
Q ss_pred EEEEeCCCCC-CCccceEeeccccccccc-cHHHHHHHHhhh
Q psy169 238 KAQYLEGDVK-DKKLEYTWAAREELPKLL-LEDYNKNISLFL 277 (280)
Q Consensus 238 ka~~~~G~~~-~e~~d~~WltkeEl~~~l-~~~y~~~v~~~L 277 (280)
.|....|.+. .+..++.|++.+|+.++. .+....-+..++
T Consensus 92 ~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 133 (155)
T 2b06_A 92 KATEFSGTLQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMME 133 (155)
T ss_dssp EECEEEECCCCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHH
T ss_pred EEEecCCCCCCCcceeeEEeeHHHhhhCCCChhHHHHHHHHh
Confidence 9988777653 467899999999999984 444554454444
No 30
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.46 E-value=1.7e-13 Score=112.34 Aligned_cols=104 Identities=17% Similarity=0.299 Sum_probs=74.2
Q ss_pred EEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 159 LVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 159 LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
.+||+++..+. .|.|.||+|+++.|||+.+||.||+.||+|+.+.+. ...+++.+.+.|+.............+++|
T Consensus 31 ~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 108 (160)
T 1rya_A 31 EFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPIT--AGQFYGVWQHFYDDNFSGTDFTTHYVVLGF 108 (160)
T ss_dssp CEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGG--GSEEEEEEEEEESSBTTBSSSCEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcc--cceEEEEEeEEEcccccCCCcCcEEEEEEE
Confidence 48888887422 578999999999999999999999999999985311 123455555554432100000024578889
Q ss_pred EEEEeCCCCC---CCccceEeecccccccc
Q psy169 238 KAQYLEGDVK---DKKLEYTWAAREELPKL 264 (280)
Q Consensus 238 ka~~~~G~~~---~e~~d~~WltkeEl~~~ 264 (280)
.|....+.+. .++.++.|++.+|+.++
T Consensus 109 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 109 RFRVSEEELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp EEECCGGGCCCCSSSEEEEEEECHHHHHHC
T ss_pred EEEcCccccccCCCccceEEEecHHHHhhc
Confidence 9988776652 46789999999999986
No 31
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.46 E-value=3.2e-13 Score=110.54 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=73.1
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFK 238 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffk 238 (280)
.+||+++ .|.|.||||+++.|||+.+||.||+.||+|+.+... .+++.+.+.|+... .......++|.
T Consensus 31 ~vLl~~r----~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~f~ 98 (154)
T 2pqv_A 31 KLLVTKD----KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAG----QLAFVVENRFEVDG----VSYHNIEFHYL 98 (154)
T ss_dssp EEEEEEE----TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEE----EEEEEEEEEEEETT----EEEEEEEEEEE
T ss_pred EEEEEec----CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeec----eEEEEEeeeecCCC----CcceEEEEEEE
Confidence 5888988 358999999999999999999999999999988742 23344444333210 00234578899
Q ss_pred EEEeCCCCC-----CCccceEeecccccccc-ccHHHHH
Q psy169 239 AQYLEGDVK-----DKKLEYTWAAREELPKL-LLEDYNK 271 (280)
Q Consensus 239 a~~~~G~~~-----~e~~d~~WltkeEl~~~-l~~~y~~ 271 (280)
|....+... .+..++.|++.+|+.++ +.+...+
T Consensus 99 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~ 137 (154)
T 2pqv_A 99 VDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVPVFLK 137 (154)
T ss_dssp EEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEESTTHH
T ss_pred EEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCcHHHH
Confidence 998877542 24689999999999986 4444433
No 32
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.46 E-value=2e-13 Score=118.40 Aligned_cols=107 Identities=20% Similarity=0.276 Sum_probs=77.6
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEee---CCccccccccccceEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFK---YPKSLQAESNVVGAKL 234 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~---yp~~~~~~~~~~g~kv 234 (280)
..+||+++. ..|.|.||||+++.|||+.+||.||+.||+|+++... ..++++.+. +|.. ..+...
T Consensus 79 ~~vLLv~r~--~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~----~~l~~~~~~~~~~~~~------~~~~~~ 146 (205)
T 3q1p_A 79 EKLLFVKEK--SDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF----KLLAIFDKEKHQPSPS------ATHVYK 146 (205)
T ss_dssp TEEEEEEC-----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE----EEEEEEEHHHHSCCCC------SSCEEE
T ss_pred CEEEEEEEc--CCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc----eEEEEEeccccCCCCC------CceEEE
Confidence 368999987 3568999999999999999999999999999987742 234444432 1111 134667
Q ss_pred EEEEEEEeCCCCC--CCccceEeeccccccccc-cHHHHHHHHhh
Q psy169 235 FFFKAQYLEGDVK--DKKLEYTWAAREELPKLL-LEDYNKNISLF 276 (280)
Q Consensus 235 fffka~~~~G~~~--~e~~d~~WltkeEl~~~l-~~~y~~~v~~~ 276 (280)
+||.|.+..|.+. .++.++.|++.+||.++. .+.....|..+
T Consensus 147 ~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~ 191 (205)
T 3q1p_A 147 IFIGCEIIGGEKKTSIETEEVEFFGENELPNLSIARNTEDQIKEM 191 (205)
T ss_dssp EEEEEEEEEECCCCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHH
T ss_pred EEEEEEecCCccCCCCcceEEEEEeHHHhhhcCCCccHHHHHHHH
Confidence 8899999888763 578999999999999884 33344444443
No 33
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.44 E-value=3.3e-13 Score=115.51 Aligned_cols=111 Identities=23% Similarity=0.337 Sum_probs=79.0
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..|||++++ ..|.|.||||+++.|||+.+||.||+.||+|+.+.. ...++.+.+.++... .......+++|
T Consensus 15 ~~vLL~~r~--~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~f 85 (188)
T 3fk9_A 15 DQVLLLQKP--RRGWWVAPGGKMEAGESILETVKREYWEETGITVKN----PELKGIFSMVIFDEG---KIVSEWMLFTF 85 (188)
T ss_dssp TEEEEEECT--TTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESS----CEEEEEEEEEEEETT---EEEEEEEEEEE
T ss_pred CEEEEEEeC--CCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCC----ceEEEEEEEEecCCC---cceEEEEEEEE
Confidence 358999986 357899999999999999999999999999997652 123455555442211 00011268889
Q ss_pred EEEEeCCCCC--CCccceEeecccccccc-ccHHHHHHHHhhh
Q psy169 238 KAQYLEGDVK--DKKLEYTWAAREELPKL-LLEDYNKNISLFL 277 (280)
Q Consensus 238 ka~~~~G~~~--~e~~d~~WltkeEl~~~-l~~~y~~~v~~~L 277 (280)
.|....|.+. .+..++.|++.+|+.++ +.+....-+..++
T Consensus 86 ~a~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l 128 (188)
T 3fk9_A 86 KATEHEGEMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVL 128 (188)
T ss_dssp EESCEESCCCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHT
T ss_pred EEECCCCCCcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHH
Confidence 9988888763 34579999999999986 5555444444443
No 34
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.44 E-value=3.5e-13 Score=116.92 Aligned_cols=107 Identities=18% Similarity=0.338 Sum_probs=79.0
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEe---eCCccccccccccceEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKF---KYPKSLQAESNVVGAKL 234 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~---~yp~~~~~~~~~~g~kv 234 (280)
..+||+++. .|.|.||+|+++.|||+.+||.||+.||+|+++... ..++.+.+ .+|.. ......
T Consensus 81 ~~vLLvrr~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~l~~~~~~~~~~~~~------~~~~~~ 147 (206)
T 3o8s_A 81 DKILLVQEN---DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ----RVVAILDKHKNNPAKS------AHRVTK 147 (206)
T ss_dssp TEEEEEECT---TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEE----EEEEEEEHHHHCC-----------CEEE
T ss_pred CEEEEEEec---CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceee----eEEEEEeccccCCCCC------CceEEE
Confidence 469999987 468999999999999999999999999999987642 23444442 22211 034678
Q ss_pred EEEEEEEeCCCCC--CCccceEeecccccccccc-HHHHHHHHhhh
Q psy169 235 FFFKAQYLEGDVK--DKKLEYTWAAREELPKLLL-EDYNKNISLFL 277 (280)
Q Consensus 235 fffka~~~~G~~~--~e~~d~~WltkeEl~~~l~-~~y~~~v~~~L 277 (280)
+||.|.+..|.+. .+..++.|++.+||.++.. +...+.|..++
T Consensus 148 ~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~ 193 (206)
T 3o8s_A 148 VFILCRLLGGEFQPNSETVASGFFSLDDLPPLYLGKNTAEQLALCL 193 (206)
T ss_dssp EEEEEEEEEECCCCCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHH
T ss_pred EEEEEEecCCeecCCCCceEEEEEeHHHhhhccCCCchHHHHHHHH
Confidence 8999999888764 5789999999999999854 34444444443
No 35
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.44 E-value=1.1e-12 Score=109.67 Aligned_cols=105 Identities=21% Similarity=0.355 Sum_probs=73.9
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceE-EEEecccceEEEEeeCCccccc---cccccceEE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIH-ARFYGNAPCGFYKFKYPKSLQA---ESNVVGAKL 234 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~-v~~vg~~P~g~~~~~yp~~~~~---~~~~~g~kv 234 (280)
.+||+++. ..+.|.||+|+++.|||+.+||.||+.||+|+.+. ..+++.... ++.|.+|+.... .....+..+
T Consensus 21 ~vLl~~r~--~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 97 (164)
T 2kdv_A 21 QVMWARRF--GQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRN-WLRYKLPKRLVRWDTKPVCIGQKQ 97 (164)
T ss_dssp EEEEEEET--TCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSS-CEEEECCTTTCCTTSSSCCCEEEE
T ss_pred EEEEEEEc--CCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecc-eeEEecCcceeeeccCccccccee
Confidence 58888887 35789999999999999999999999999999765 333332221 234556653211 011135578
Q ss_pred EEEEEEEeCCCC--C------CCccceEeecccccccccc
Q psy169 235 FFFKAQYLEGDV--K------DKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 235 fffka~~~~G~~--~------~e~~d~~WltkeEl~~~l~ 266 (280)
+||.+++..+.. . .++.+++|++.+++.+.+.
T Consensus 98 ~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~ 137 (164)
T 2kdv_A 98 KWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVV 137 (164)
T ss_dssp EEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSC
T ss_pred EEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhh
Confidence 999999876532 1 3678999999999866543
No 36
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.42 E-value=7.2e-13 Score=113.71 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=66.3
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCc-eEEEEecccceEEEEeeCCcccccc---ccccceE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKT-IHARFYGNAPCGFYKFKYPKSLQAE---SNVVGAK 233 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~-i~v~~vg~~P~g~~~~~yp~~~~~~---~~~~g~k 233 (280)
..+||++++ ..|.|.||||+++.|||+.+||.||+.||+|+. +.+ ++..+..+..+..+...... ..... .
T Consensus 58 ~~vLL~~r~--~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 132 (197)
T 3fcm_A 58 NKFLMIHHN--IYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTP--LLDKAFALDVLTVNGHIKRGKYVSSHLH-L 132 (197)
T ss_dssp CEEEEEEET--TTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEE--SCSSCSEEEEEEECCEEETTEEECCEEE-E
T ss_pred CEEEEEEec--CCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccc--cCCCceEEEEeeecCccccCcccCCcee-E
Confidence 369999987 356899999999999999999999999999997 543 33333333222222211000 00001 1
Q ss_pred EEEEEEEEeCCCC----CCCccceEeeccccccccccH
Q psy169 234 LFFFKAQYLEGDV----KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 234 vfffka~~~~G~~----~~e~~d~~WltkeEl~~~l~~ 267 (280)
.++|.+....+.. ..++.++.|++.+|+.+++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 170 (197)
T 3fcm_A 133 NLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSE 170 (197)
T ss_dssp EEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCC
T ss_pred EEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCC
Confidence 1445555555542 246799999999999998554
No 37
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.42 E-value=1.9e-13 Score=112.32 Aligned_cols=108 Identities=10% Similarity=0.121 Sum_probs=76.1
Q ss_pred CcEEEEEEecCCC--CCceecCCeecCCCCCHH-HHHHHHHHHHhC-CceEEEEecccceEEEEeeCCccccccccccce
Q psy169 157 KHLVLLIKEKLGD--KSHWIMPFGKRQEGETMR-QTAERILAEKFN-KTIHARFYGNAPCGFYKFKYPKSLQAESNVVGA 232 (280)
Q Consensus 157 ~~LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~-qaAeRel~Ee~G-~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~ 232 (280)
+..+||+||..++ .|.|.||+|+++.||++. +||.||+.||+| +.+... .+++.+.+.|+. ...
T Consensus 33 ~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~----~~l~~~~~~~~~--------~~~ 100 (155)
T 1x51_A 33 GAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL----RHLGEVVHTFSH--------IKL 100 (155)
T ss_dssp SEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC----EECCCBCCBCSS--------CEE
T ss_pred CCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee----eecceEEEecCC--------ccE
Confidence 3568999987432 578999999999999996 999999999999 654321 122233344432 234
Q ss_pred EEEEEEEEEeCCCCC-CCccceEeecccccccc-ccHHHHHHHHhh
Q psy169 233 KLFFFKAQYLEGDVK-DKKLEYTWAAREELPKL-LLEDYNKNISLF 276 (280)
Q Consensus 233 kvfffka~~~~G~~~-~e~~d~~WltkeEl~~~-l~~~y~~~v~~~ 276 (280)
.+++|.|.+..|.+. .+..++.|++.+|+.++ +.+...+-+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 146 (155)
T 1x51_A 101 TYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 146 (155)
T ss_dssp EEEEEEEECSSCCCCCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHH
T ss_pred EEEEEEEEEcCCCCCCCCCCccEEccHHHhhhcCCCHHHHHHHHHH
Confidence 678899988777653 45689999999999987 444444444433
No 38
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.42 E-value=8.6e-13 Score=110.82 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=76.4
Q ss_pred EEEEEEecCCC---CCceec-CCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEE
Q psy169 159 LVLLIKEKLGD---KSHWIM-PFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 159 LyLLVk~~~g~---~~~W~F-P~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
.+||++|..+. .|.|.| |||+++.|||+.+||.||+.||+|+.+.. -.+++.+.+.++. ....+
T Consensus 50 ~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~----~~~l~~~~~~~~~--------~~~~~ 117 (180)
T 2fkb_A 50 KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVP----FAEHGQFYFEDKN--------CRVWG 117 (180)
T ss_dssp CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCC----CEEEEEEEEEETT--------EEEEE
T ss_pred EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccc----eEEEEEEEecCCC--------ceEEE
Confidence 37788876432 468999 99999999999999999999999996542 1234445443221 23467
Q ss_pred EEEEEEEeCCCCC---CCccceEeeccccccccc---cHHHHHHHHhhhh
Q psy169 235 FFFKAQYLEGDVK---DKKLEYTWAAREELPKLL---LEDYNKNISLFLM 278 (280)
Q Consensus 235 fffka~~~~G~~~---~e~~d~~WltkeEl~~~l---~~~y~~~v~~~L~ 278 (280)
++|.|. ..|.+. .++.++.|++.+|+.+++ .+.....+..++.
T Consensus 118 ~~f~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~ 166 (180)
T 2fkb_A 118 ALFSCV-SHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMK 166 (180)
T ss_dssp EEEEEE-CCCCCCCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHH
T ss_pred EEEEEe-cCCCcCCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 788887 455542 467899999999999974 4566666665553
No 39
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.40 E-value=4.7e-13 Score=125.61 Aligned_cols=107 Identities=18% Similarity=0.258 Sum_probs=74.9
Q ss_pred CCcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCcccccc-----cccc
Q psy169 156 DKHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAE-----SNVV 230 (280)
Q Consensus 156 ~~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~-----~~~~ 230 (280)
++..|||+++.. .|.|.||+|+++.|||+.+||.||+.||+|+++... .+++.+.|.|+...... ....
T Consensus 36 ~~~~vLLv~r~~--~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~----~~l~~~~~~~~~~g~~~~~~~~~~~~ 109 (364)
T 3fjy_A 36 DSIEVCIVHRPK--YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG----PYLCEVEYPLSEEGKKTRHSHDCTAD 109 (364)
T ss_dssp TTEEEEEEEETT--TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE----EEEEEEC-------------------
T ss_pred CceEEEEEEcCC--CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec----cccceEEEeccCCCcccccccccccC
Confidence 456799999973 478999999999999999999999999999988743 34555566554321000 0001
Q ss_pred ceEEEEEEEEEeCCC--------------C-CCCccceEeeccccccccccHH
Q psy169 231 GAKLFFFKAQYLEGD--------------V-KDKKLEYTWAAREELPKLLLED 268 (280)
Q Consensus 231 g~kvfffka~~~~G~--------------~-~~e~~d~~WltkeEl~~~l~~~ 268 (280)
...++||.+....+. + ..++.++.|++.+|+.+++...
T Consensus 110 ~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 162 (364)
T 3fjy_A 110 TKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHS 162 (364)
T ss_dssp --CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCH
T ss_pred ceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcch
Confidence 356888999988763 1 2478999999999999987653
No 40
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.40 E-value=9.6e-13 Score=113.21 Aligned_cols=97 Identities=18% Similarity=0.283 Sum_probs=66.5
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEE-EeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFY-KFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~-~~~yp~~~~~~~~~~g~kvff 236 (280)
..+||+|++....|.|.||||+++.|||+.+||.||+.||+|+++... ..+++. .+.+|.. .+...+|
T Consensus 39 ~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~----~l~~~~~~~~~~~~-------~~~~~~~ 107 (199)
T 3h95_A 39 RKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFR----SVLSIRQQHTNPGA-------FGKSDMY 107 (199)
T ss_dssp TEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEE----EEEEEEECC----------------CEE
T ss_pred CEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccc----eEEEEEeeecCCCC-------ceeEEEE
Confidence 369999987544689999999999999999999999999999987732 123321 2333322 1233455
Q ss_pred EEEEEeCCC--C---CCCccceEeeccccccccc
Q psy169 237 FKAQYLEGD--V---KDKKLEYTWAAREELPKLL 265 (280)
Q Consensus 237 fka~~~~G~--~---~~e~~d~~WltkeEl~~~l 265 (280)
|.+.+..+. . ..++.++.|++.+||.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 108 IICRLKPYSFTINFCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp EEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCS
T ss_pred EEEEEcCCCcccCCCccceeeeEEEeHHHHhhhh
Confidence 666665433 2 2467999999999999863
No 41
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.40 E-value=1.9e-12 Score=106.65 Aligned_cols=105 Identities=20% Similarity=0.262 Sum_probs=69.3
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEe-c---c-------cceEEE--EeeCCcccc
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFY-G---N-------APCGFY--KFKYPKSLQ 224 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~v-g---~-------~P~g~~--~~~yp~~~~ 224 (280)
..+||++++. .|.|.||||+++.|||+.+||.||+.||+|+++..... + . .|..++ ...|+...
T Consensus 12 ~~vLL~~r~~--~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 88 (156)
T 1k2e_A 12 GKVLLVKHKR--LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVILEEVVKYPEET- 88 (156)
T ss_dssp TEEEEEECTT--TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCSEEEEEEEECSSCE-
T ss_pred CEEEEEEEcC--CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccceeeeeeecCCCCc-
Confidence 4589999873 57899999999999999999999999999998774211 1 0 111111 11233210
Q ss_pred ccccccceEEEEEEEEEeCCCCCCCccceEeecccccccc-ccHHHHHHHH
Q psy169 225 AESNVVGAKLFFFKAQYLEGDVKDKKLEYTWAAREELPKL-LLEDYNKNIS 274 (280)
Q Consensus 225 ~~~~~~g~kvfffka~~~~G~~~~e~~d~~WltkeEl~~~-l~~~y~~~v~ 274 (280)
.....++|.|...+| +..+++|++.+|+.++ +.+....-+.
T Consensus 89 -----~~~~~~~f~~~~~~~----e~~~~~W~~~~el~~~~~~~~~~~~l~ 130 (156)
T 1k2e_A 89 -----HIHFDLIYLVKRVGG----DLKNGEWIDVREIDRIETFPNVRKVVS 130 (156)
T ss_dssp -----EEEEEEEEEEEEEEE----CCCSCEEEEGGGGGGSCBSTTHHHHHH
T ss_pred -----eEEEEEEEEEEecCC----cEeeeEEeCHHHHhcCCCChHHHHHHH
Confidence 112345677876654 4679999999999986 3343333333
No 42
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.39 E-value=3e-12 Score=107.38 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=67.3
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEE
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFK 238 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffk 238 (280)
-+||++++ .|.|.||||+++.|||+.+||.||+.||+|+.+... ..++ .|.++. ...++|.
T Consensus 28 ~vLL~~r~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~l~--~~~~~~----------~~~~~f~ 88 (163)
T 3f13_A 28 GVLVTASR---GGRYNLPGGKANRGELRSQALIREIREETGLRINSM----LYLF--DHITPF----------NAHKVYL 88 (163)
T ss_dssp EEEEEECC------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEE----EEEE--EEECSS----------EEEEEEE
T ss_pred EEEEEEEC---CCeEECCceeCCCCCCHHHHHHHHHHHHHCccccee----EEEE--EEecCC----------eEEEEEE
Confidence 38888876 368999999999999999999999999999987642 1233 333332 3566677
Q ss_pred EEEeCCCCC--CCccceEeeccccccccccHHHHHHHHh
Q psy169 239 AQYLEGDVK--DKKLEYTWAAREELPKLLLEDYNKNISL 275 (280)
Q Consensus 239 a~~~~G~~~--~e~~d~~WltkeEl~~~l~~~y~~~v~~ 275 (280)
|.+ .|.+. .++.++.|++.+++..-+.+....-+..
T Consensus 89 ~~~-~~~~~~~~E~~~~~W~~~~~~~~~l~~~~~~il~~ 126 (163)
T 3f13_A 89 CIA-QGQPKPQNEIERIALVSSPDTDMDLFVEGRAILRR 126 (163)
T ss_dssp EEC--CCCCCCTTCCEEEEESSTTCSSCBCHHHHHHHHH
T ss_pred EEE-CCcCccCCCceEEEEECcccccCCCCHHHHHHHHH
Confidence 764 67763 4679999999666665566644444433
No 43
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.38 E-value=7.1e-13 Score=108.82 Aligned_cols=116 Identities=23% Similarity=0.348 Sum_probs=76.2
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccc------cccccce
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQA------ESNVVGA 232 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~------~~~~~g~ 232 (280)
.+||++|... .|.|.||+|+++.|||+.+||.||+.||+|+.+... .+..+ ..+.|.|+..... .....+.
T Consensus 27 ~vLl~~r~~~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (165)
T 1f3y_A 27 KIFAASRLDI-PDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEV-IAEVP-YWLTYDFPPKVREKLNIQWGSDWKGQ 103 (165)
T ss_dssp CEEEEEETTE-EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEE-EEECS-SCCBCCCCHHHHHHHGGGSCSSCCSC
T ss_pred cEEEEecCCC-CCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhh-hcccc-cceeeecCccccccccccccccccCc
Confidence 4888988631 368999999999999999999999999999987521 11111 1123444432110 0000234
Q ss_pred EEEEEEEEEeCCC--C--------CCCccceEeeccccccccccH---HHHHHHHhhh
Q psy169 233 KLFFFKAQYLEGD--V--------KDKKLEYTWAAREELPKLLLE---DYNKNISLFL 277 (280)
Q Consensus 233 kvfffka~~~~G~--~--------~~e~~d~~WltkeEl~~~l~~---~y~~~v~~~L 277 (280)
.++||.+.+..+. + ..++.++.|++.+|+.+++.+ ..++.+...|
T Consensus 104 ~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l 161 (165)
T 1f3y_A 104 AQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVF 161 (165)
T ss_dssp BEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHH
T ss_pred eEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHh
Confidence 5677888776542 2 236789999999999998754 5555554444
No 44
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.38 E-value=1e-12 Score=109.49 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=77.7
Q ss_pred cEEEEEEecCCC---CCcee-cCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEE-eeCCccccccccccce
Q psy169 158 HLVLLIKEKLGD---KSHWI-MPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYK-FKYPKSLQAESNVVGA 232 (280)
Q Consensus 158 ~LyLLVk~~~g~---~~~W~-FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~-~~yp~~~~~~~~~~g~ 232 (280)
..+||++|..+. .|.|. ||+|+++.|||+.+||.||+.||+|+.+... .-.+++.+. |.++. ..
T Consensus 46 ~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~--~l~~~~~~~~~~~~~---------~~ 114 (171)
T 1q27_A 46 GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDAL--SWRPLASFSPFQTTL---------SS 114 (171)
T ss_dssp TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSS--CEEEEEEECSSSSCC---------SS
T ss_pred CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCccccc--ceEEEEEEeccCCCC---------cc
Confidence 367888875322 57898 9999999999999999999999999986521 012333333 33221 12
Q ss_pred EEEEEEEEEeCCCCC---CCccceEeecccccccc------ccHHHHHHHHhhhhc
Q psy169 233 KLFFFKAQYLEGDVK---DKKLEYTWAAREELPKL------LLEDYNKNISLFLMD 279 (280)
Q Consensus 233 kvfffka~~~~G~~~---~e~~d~~WltkeEl~~~------l~~~y~~~v~~~L~d 279 (280)
.+++|.|.. .|.+. .++.++.|++.+|+.+. .+...+..+...+.+
T Consensus 115 ~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~~~~e 169 (171)
T 1q27_A 115 FMCVYELRS-DATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRCYRE 169 (171)
T ss_dssp EEEEEEEEC-CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHHHHTS
T ss_pred EEEEEEEEE-CCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHHHHhc
Confidence 678888888 66652 46789999999999964 233566777766655
No 45
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.37 E-value=2.9e-13 Score=119.00 Aligned_cols=109 Identities=17% Similarity=0.102 Sum_probs=74.6
Q ss_pred cEEEEEEecCCC-----CCceec-CCeecCCCCC------HHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccc
Q psy169 158 HLVLLIKEKLGD-----KSHWIM-PFGKRQEGET------MRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQA 225 (280)
Q Consensus 158 ~LyLLVk~~~g~-----~~~W~F-P~G~ve~gEt------l~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~ 225 (280)
..|||++|..+. .|.|.| |||+++.||| +.+||.||++||+|+++... .++|++.+.+...
T Consensus 79 grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~----~~ig~~~~~~~~~--- 151 (211)
T 3e57_A 79 DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLREL----EFLGLINSSTTEV--- 151 (211)
T ss_dssp TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEE----EEEEEEECCSSHH---
T ss_pred CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeecc----EEEEEEeccCCCC---
Confidence 359999987432 267998 9999999998 69999999999999976532 4667777632111
Q ss_pred cccccceEEEEEEEEEeCCCCC-CCccceEeecccccccccc------HHHHHHHHhh
Q psy169 226 ESNVVGAKLFFFKAQYLEGDVK-DKKLEYTWAAREELPKLLL------EDYNKNISLF 276 (280)
Q Consensus 226 ~~~~~g~kvfffka~~~~G~~~-~e~~d~~WltkeEl~~~l~------~~y~~~v~~~ 276 (280)
+ .....++|.|+...|.+. .+..++.|++.+||.++.+ +-.++.|.++
T Consensus 152 -~--~~~l~~~f~~~~~~g~~~~~E~~~~~W~~~~eL~~~~~~le~wS~lvl~~l~~~ 206 (211)
T 3e57_A 152 -S--RVHLGALFLGRGKFFSVKEKDLFEWELIKLEELEKFSGVMEGWSKISAAVLLNL 206 (211)
T ss_dssp -H--HTEEEEEEEEEEEEEEESCTTTCEEEEEEHHHHHHHGGGCCHHHHHHHHHHHHH
T ss_pred -C--eEEEEEEEEEEeCCceeCCCCeEEEEEEEHHHHHHhHhhccchhHHHHHHHHHH
Confidence 0 012346789998888764 4678999999999999832 3355555443
No 46
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.35 E-value=5.6e-12 Score=114.52 Aligned_cols=96 Identities=22% Similarity=0.302 Sum_probs=75.2
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+||++++....|.|.||+|.++.|||+.+||.||+.||+|+.+... ..++.+.+.||. ..+++|
T Consensus 151 ~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~----~~~~~~~~~~~~----------~~~~~f 216 (269)
T 1vk6_A 151 DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNL----RYVTSQPWPFPQ----------SLMTAF 216 (269)
T ss_dssp TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEE----EEEEEEEEETTE----------EEEEEE
T ss_pred CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeE----EEEEEEecCCCC----------EEEEEE
Confidence 358999987433678999999999999999999999999999987632 234445555543 357788
Q ss_pred EEEEeCCCCC---CCccceEeeccccccccccH
Q psy169 238 KAQYLEGDVK---DKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 238 ka~~~~G~~~---~e~~d~~WltkeEl~~~l~~ 267 (280)
.|.+..|.+. .+..++.|++.+|+.++..+
T Consensus 217 ~a~~~~~~~~~~~~E~~~~~W~~~~el~~l~~~ 249 (269)
T 1vk6_A 217 MAEYDSGDIVIDPKELLEANWYRYDDLPLLPPP 249 (269)
T ss_dssp EEEEEECCCCCCTTTEEEEEEEETTSCCSCCCT
T ss_pred EEEECCCCcCCCCcceEEEEEEEHHHhhhcccC
Confidence 8988877763 46789999999999987443
No 47
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.34 E-value=2.4e-12 Score=107.60 Aligned_cols=94 Identities=22% Similarity=0.209 Sum_probs=66.1
Q ss_pred EEEEEEecC-C-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKEKL-G-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~~~-g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+||+++.. + ..+.|.||+|++++|||+.+||.||+.||+|+ +... .+++.+.+ .+.. ....+++
T Consensus 46 ~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~----~~l~~~~~-~~~~-------~~~~~~~ 112 (170)
T 1v8y_A 46 RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDL----TYLFSYFV-SPGF-------TDEKTHV 112 (170)
T ss_dssp EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEE----EEEEEEES-CTTT-------BCCEEEE
T ss_pred EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCc----eeeEEEec-CCCc-------cccEEEE
Confidence 578887642 2 35789999999999999999999999999999 6532 23443322 1221 2356788
Q ss_pred EEEEEeCCCC----CCCccceEeeccccccccc
Q psy169 237 FKAQYLEGDV----KDKKLEYTWAAREELPKLL 265 (280)
Q Consensus 237 fka~~~~G~~----~~e~~d~~WltkeEl~~~l 265 (280)
|.|....+.. ..++.++.|++.+|+.+++
T Consensus 113 f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 145 (170)
T 1v8y_A 113 FLAENLKEVEAHPDEDEAIEVVWMRPEEALERH 145 (170)
T ss_dssp EEEEEEEECC--------CEEEEECHHHHHHHH
T ss_pred EEEEeccccCCCCCCCceEEEEEEEHHHHHHHH
Confidence 8888765332 2467899999999999874
No 48
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.32 E-value=5e-12 Score=107.57 Aligned_cols=97 Identities=18% Similarity=0.301 Sum_probs=68.8
Q ss_pred EEEEEEecCCC---CCceec-CCeecCCCCCHHHHHHHHHHHHhCCceEE--EEecccceEEEEeeCCccccccccccce
Q psy169 159 LVLLIKEKLGD---KSHWIM-PFGKRQEGETMRQTAERILAEKFNKTIHA--RFYGNAPCGFYKFKYPKSLQAESNVVGA 232 (280)
Q Consensus 159 LyLLVk~~~g~---~~~W~F-P~G~ve~gEtl~qaAeRel~Ee~G~~i~v--~~vg~~P~g~~~~~yp~~~~~~~~~~g~ 232 (280)
.+||++|..+. .|.|.| |+|+++.|||+.+||.||+.||+|+.+.. .+++.. .+.+.++.... ...
T Consensus 45 ~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~---~~~~~~~~~~~-----~~~ 116 (190)
T 1hzt_A 45 QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF---RYRATDPSGIV-----ENE 116 (190)
T ss_dssp CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTC---EEEEECTTSCE-----EEE
T ss_pred EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeE---EEEeeCCCCCc-----ceE
Confidence 47888886432 578999 99999999999999999999999998763 223221 23333443210 124
Q ss_pred EEEEEEEEEeCCCC---CCCccceEeecccccccc
Q psy169 233 KLFFFKAQYLEGDV---KDKKLEYTWAAREELPKL 264 (280)
Q Consensus 233 kvfffka~~~~G~~---~~e~~d~~WltkeEl~~~ 264 (280)
.+++|.|.+ .|.+ ..++.++.|++.+|+.++
T Consensus 117 ~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 117 VCPVFAART-TSALQINDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp ECCEEEEEB-CSCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEEec-CCCCcCCccceeeEEEecHHHHHHH
Confidence 567788875 4554 246789999999999887
No 49
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.30 E-value=1.3e-12 Score=106.52 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=62.8
Q ss_pred EEEEEe-cCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEE-EEecccceEEEEeeCCccccccccccceEEEE
Q psy169 160 VLLIKE-KLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHA-RFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 160 yLLVk~-~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v-~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
+||+++ +.+ +.+.|.||+|++++|||+.+||.||+.||+|+.+.. .+++ .+ |..+.. ....+++
T Consensus 19 vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~-----~~-~~~~~~-------~~~~~~~ 85 (145)
T 2w4e_A 19 AVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLP-----GF-YPQPSI-------SGVVFYP 85 (145)
T ss_dssp EEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECC-----CB-BSCTTT-------CCCEEEE
T ss_pred EEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEe-----cC-cCCCCc-------cCceEEE
Confidence 666654 332 245899999999999999999999999999997653 2222 11 111111 1245777
Q ss_pred EEEEEeC-CCC---CCCccceEeeccccccccccH
Q psy169 237 FKAQYLE-GDV---KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 237 fka~~~~-G~~---~~e~~d~~WltkeEl~~~l~~ 267 (280)
|.|.... +.. ..++.++.|++.+|+.+++..
T Consensus 86 f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 86 LLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp EEEEEEEEC--------CEEEEEEEHHHHHHHHHH
T ss_pred EEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 7777543 332 246789999999999987543
No 50
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.29 E-value=4e-12 Score=108.05 Aligned_cols=106 Identities=25% Similarity=0.163 Sum_probs=68.6
Q ss_pred CcEEEEEEec--------CCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCcccccccc
Q psy169 157 KHLVLLIKEK--------LGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESN 228 (280)
Q Consensus 157 ~~LyLLVk~~--------~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~ 228 (280)
+..+||++|. ....|.|.||||+++.|||+.+||.||+.||+|+++... ..++.+. ++... ..
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~l~~~~--~~~~~--~~- 115 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPL----IPFGVFD--KPGRD--PR- 115 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCC----EEEEEEC--CTTSS--TT-
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcce----EEEEEEc--CCccC--CC-
Confidence 4579999983 123678999999999999999999999999999976521 2344433 33211 10
Q ss_pred ccceEEEEEEEEEeCCC---C--CCCccceEeecccccccc-ccHHHHHH
Q psy169 229 VVGAKLFFFKAQYLEGD---V--KDKKLEYTWAAREELPKL-LLEDYNKN 272 (280)
Q Consensus 229 ~~g~kvfffka~~~~G~---~--~~e~~d~~WltkeEl~~~-l~~~y~~~ 272 (280)
......+|.+.+..+. . ..++.++.|++.+|+.++ +.+....-
T Consensus 116 -~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~i 164 (187)
T 3i9x_A 116 -GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDM 164 (187)
T ss_dssp -SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHH
T ss_pred -CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHH
Confidence 1122333334333221 1 357789999999999975 44433333
No 51
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.29 E-value=7.8e-12 Score=107.94 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=69.9
Q ss_pred EEEEEEec-CC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKEK-LG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~~-~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+||++|. .+ ..+.|.||+|++++|||+.+||.|||.||+|+.+... .+++.+.+. |.. ....+++
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~----~~l~~~~~~-~~~-------~~~~~~~ 128 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDL----TFLKKLSMA-PSY-------FSSKMNI 128 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEE----EEEEEEECC-TTT-------CCCEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCce----EEEEEEeCC-CCc-------cCcEEEE
Confidence 57888764 22 2457999999999999999999999999999987632 234444332 211 2346778
Q ss_pred EEEEEeCCC-C---CCCccceEeeccccccccccH
Q psy169 237 FKAQYLEGD-V---KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 237 fka~~~~G~-~---~~e~~d~~WltkeEl~~~l~~ 267 (280)
|.|....+. . ..+..++.|++.+|+.+++..
T Consensus 129 f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 163 (198)
T 1vhz_A 129 VVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLED 163 (198)
T ss_dssp EEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGC
T ss_pred EEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 888776543 2 246789999999999998653
No 52
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.28 E-value=6.3e-12 Score=101.69 Aligned_cols=106 Identities=14% Similarity=0.227 Sum_probs=69.4
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+||+++. ..|.|.||+|+++.|||+.+||.||+.||+|+.+... . .++++... +. .+....+|
T Consensus 17 ~~vLl~~r~--~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~-~---~~~~~~~~-~~--------~~~~~~~~ 81 (146)
T 2jvb_A 17 SKILLVQGT--ESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDY-I---DDNQFIER-NI--------QGKNYKIF 81 (146)
T ss_dssp SEEEEECCS--SSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSS-S---CSSCEEEE-EE--------TTEEEEEE
T ss_pred CEEEEEEEc--CCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHh-c---cccccccc-cc--------CCceEEEE
Confidence 468888876 3578999999999999999999999999999987521 1 11222211 00 12223333
Q ss_pred EEEEeC----CCC--CCCccceEeeccccccccccH---------HHHHHHHhhhh
Q psy169 238 KAQYLE----GDV--KDKKLEYTWAAREELPKLLLE---------DYNKNISLFLM 278 (280)
Q Consensus 238 ka~~~~----G~~--~~e~~d~~WltkeEl~~~l~~---------~y~~~v~~~L~ 278 (280)
.+.... +.+ ..++.++.|++.+|+.+.+.+ .+++.+..++.
T Consensus 82 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l~~~~~ 137 (146)
T 2jvb_A 82 LISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPLSMWLR 137 (146)
T ss_dssp EECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCcCCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHHHHHHH
Confidence 333322 222 246789999999999997543 35555655553
No 53
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.27 E-value=6.8e-12 Score=115.50 Aligned_cols=115 Identities=18% Similarity=0.178 Sum_probs=76.3
Q ss_pred cEEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEE-EecccceEEEEeeCCccccccccccceEEE
Q psy169 158 HLVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHAR-FYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 158 ~LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~-~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
..+||++++.+. .|.|.||+|+++.|||+.+||.||+.||+|+++... ++|. ....+.|.+|..... .....+
T Consensus 214 ~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~ 288 (341)
T 2qjo_A 214 GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGS-IVDSHVFDAPGRSLR----GRTITH 288 (341)
T ss_dssp TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHT-EEEEEEECCTTSCTT----SCEEEE
T ss_pred CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccccccccc-ccceEEEeCCCCCCC----CcEEEE
Confidence 458999887422 578999999999999999999999999999987621 1110 112345555542110 113456
Q ss_pred EEEEEEeCCCC-----CCCccceEeecccccccc---ccHHHHHHHHhhh
Q psy169 236 FFKAQYLEGDV-----KDKKLEYTWAAREELPKL---LLEDYNKNISLFL 277 (280)
Q Consensus 236 ffka~~~~G~~-----~~e~~d~~WltkeEl~~~---l~~~y~~~v~~~L 277 (280)
+|.+.+..|.. ..+..++.|++.+|+.++ +.+....-|..++
T Consensus 289 ~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~ 338 (341)
T 2qjo_A 289 AYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFV 338 (341)
T ss_dssp EEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC
T ss_pred EEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHH
Confidence 67777766653 146789999999999985 6666666666554
No 54
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.27 E-value=4.6e-12 Score=109.82 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=67.5
Q ss_pred cEEEEEEecC-C-CCCceecCCeecC-CCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEE
Q psy169 158 HLVLLIKEKL-G-DKSHWIMPFGKRQ-EGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 158 ~LyLLVk~~~-g-~~~~W~FP~G~ve-~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
..+||+++.. + ..+.|.||+|+++ .|||+.+||.||+.||+|+.+... .+++.+ |.+|.. ....+
T Consensus 55 ~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~----~~l~~~-~~~~~~-------~~~~~ 122 (207)
T 1mk1_A 55 GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTW----QVLVDL-DTAPGF-------SDESV 122 (207)
T ss_dssp SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEE----EEEEEE-CSCTTT-------BCCCE
T ss_pred CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCccccc----EEEEEE-EcCCCc-------cccEE
Confidence 4588888752 2 2468999999999 999999999999999999987642 233333 433321 12357
Q ss_pred EEEEEEEeCCCC------CCCccceEeecccccccccc
Q psy169 235 FFFKAQYLEGDV------KDKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 235 fffka~~~~G~~------~~e~~d~~WltkeEl~~~l~ 266 (280)
++|.|....+.. ..++.++.|++.+|+.+++.
T Consensus 123 ~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 160 (207)
T 1mk1_A 123 RVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVL 160 (207)
T ss_dssp EEEEEEEEEECCC----------CEEEEEHHHHHHHHH
T ss_pred EEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 778888765543 23568999999999998753
No 55
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.27 E-value=1.6e-11 Score=115.90 Aligned_cols=97 Identities=15% Similarity=0.285 Sum_probs=77.4
Q ss_pred CcEEEEEEecCCC--CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEE
Q psy169 157 KHLVLLIKEKLGD--KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 157 ~~LyLLVk~~~g~--~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
+..+||+||..++ +|.|+||||+++.| |+.+|+.||+.||+|+.+... .+++.+.+.|+. ....+
T Consensus 251 ~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~----~~l~~~~h~~~h--------~~~~~ 317 (369)
T 3fsp_A 251 EGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELT----EPIVSFEHAFSH--------LVWQL 317 (369)
T ss_dssp SSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEEC----CCCCEEEEECSS--------EEEEE
T ss_pred CCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeee----cccccEEEEcce--------EEEEE
Confidence 4579999987443 58899999999999 999999999999999988642 356667777654 24678
Q ss_pred EEEEEEEeCCCCCCCccceEeecccccccc-ccHH
Q psy169 235 FFFKAQYLEGDVKDKKLEYTWAAREELPKL-LLED 268 (280)
Q Consensus 235 fffka~~~~G~~~~e~~d~~WltkeEl~~~-l~~~ 268 (280)
++|.+.+..| ..+..++.|++.+|+.++ +.+.
T Consensus 318 ~~~~~~~~~~--~~e~~~~~Wv~~~el~~~~l~~~ 350 (369)
T 3fsp_A 318 TVFPGRLVHG--GPVEEPYRLAPEDELKAYAFPVS 350 (369)
T ss_dssp EEEEEEECCS--SCCCTTEEEEEGGGGGGSCCCHH
T ss_pred EEEEEEEcCC--CCCccccEEeeHHHhhhCCCCHH
Confidence 8999988765 346789999999999998 4443
No 56
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.25 E-value=1.4e-11 Score=106.25 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=66.8
Q ss_pred CcEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 157 KHLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 157 ~~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
+..+||+++... .|.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+ +.. ...+++
T Consensus 53 ~~~vLLv~r~~~-~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~----~~l~~~~~--~~~--------~~~~~~ 117 (194)
T 2fvv_A 53 EEEVLLVSSSRH-PDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG----RLVGIFEN--QER--------KHRTYV 117 (194)
T ss_dssp CCEEEEEECSSC-TTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE----EEEEEEEE--TTT--------TEEEEE
T ss_pred CCEEEEEEEeCC-CCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc----eEEEEEEc--CCC--------ceEEEE
Confidence 356899998632 478999999999999999999999999999987642 24455443 211 134556
Q ss_pred EEEEEeCC--CCCC---CccceEeecccccccccc
Q psy169 237 FKAQYLEG--DVKD---KKLEYTWAAREELPKLLL 266 (280)
Q Consensus 237 fka~~~~G--~~~~---e~~d~~WltkeEl~~~l~ 266 (280)
|.|.+... .... +..++.|++.+|+.+.+.
T Consensus 118 f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 118 YVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp EEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT
T ss_pred EEEEEccccCCCCCcccccceEEEEEHHHHHHHHh
Confidence 66654321 1111 236899999999988754
No 57
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.25 E-value=2.9e-11 Score=106.67 Aligned_cols=99 Identities=20% Similarity=0.229 Sum_probs=70.2
Q ss_pred CcEEEEEEecCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 157 KHLVLLIKEKLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 157 ~~LyLLVk~~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
+..+||+++... ..|.|.||||+++.|||+.+||.||+.||+|+.+... ..++.+. ++.. +.. .....+
T Consensus 27 ~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~----~~l~~~~--~~~r--~~~--~~~v~~ 96 (226)
T 2fb1_A 27 EISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYM----EQVGAFG--AIDR--DPG--ERVVSI 96 (226)
T ss_dssp EEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEE----EEEEEEC--CTTS--SSS--SCEEEE
T ss_pred CCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCce----EEEEEeC--CCCc--CCC--ceEEEE
Confidence 456999998742 2578999999999999999999999999999987531 2233332 2321 110 123455
Q ss_pred EEEEEEeCCCCC---CCccceEeeccccccccc
Q psy169 236 FFKAQYLEGDVK---DKKLEYTWAAREELPKLL 265 (280)
Q Consensus 236 ffka~~~~G~~~---~e~~d~~WltkeEl~~~l 265 (280)
+|.|.+..+... .++.++.|++.+|+.++.
T Consensus 97 ~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 97 AYYALININEYDRELVQKHNAYWVNINELPALI 129 (226)
T ss_dssp EEEEECCTTSSCHHHHHHTTEEEEETTSCCCBS
T ss_pred EEEEEecCcccccCCccccceEEEEHHHhhhcc
Confidence 778877665542 356899999999999864
No 58
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.25 E-value=1.4e-11 Score=114.15 Aligned_cols=115 Identities=21% Similarity=0.237 Sum_probs=77.1
Q ss_pred cEEEEEEecCCC-CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEE-EecccceEEEEeeCCccccccccccceEEE
Q psy169 158 HLVLLIKEKLGD-KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHAR-FYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 158 ~LyLLVk~~~g~-~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~-~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
..+||+++.... .|.|.||+|+++.|||+.+||.||+.||+|+++... +++ ...+...|.+|..... ......
T Consensus 219 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~ 293 (352)
T 2qjt_B 219 DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAI-AKRCEKVFDYPDRSVR----GRTISH 293 (352)
T ss_dssp TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHH-HEEEEEEECCTTSCTT----SEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcc-eeeeeEEecCCCCCCC----ccEEEE
Confidence 358889887422 478999999999999999999999999999987621 011 1122345555543110 012445
Q ss_pred EEEEEEeCCC--C----CCCccceEeecc-cccccc---ccHHHHHHHHhhh
Q psy169 236 FFKAQYLEGD--V----KDKKLEYTWAAR-EELPKL---LLEDYNKNISLFL 277 (280)
Q Consensus 236 ffka~~~~G~--~----~~e~~d~~Wltk-eEl~~~---l~~~y~~~v~~~L 277 (280)
+|.+.+..|. + ..++.++.|++. +|+.++ +.+....-|..++
T Consensus 294 ~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~ 345 (352)
T 2qjt_B 294 VGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILL 345 (352)
T ss_dssp EEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHH
T ss_pred EEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHH
Confidence 5666666666 2 246789999999 999984 5555555555544
No 59
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.25 E-value=6.9e-12 Score=107.47 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=67.8
Q ss_pred CcEEEEEEecC-C-------CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCcccccccc
Q psy169 157 KHLVLLIKEKL-G-------DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESN 228 (280)
Q Consensus 157 ~~LyLLVk~~~-g-------~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~ 228 (280)
+..+||+++.. + +.+.|.||+|+++ |||+.+||.||+.||+|+.+... .+++.+ |..|..
T Consensus 57 ~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~----~~l~~~-~~~~~~------ 124 (191)
T 3o6z_A 57 KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV----RKLFEL-YMSPGG------ 124 (191)
T ss_dssp TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE----EEEEEE-ESCTTT------
T ss_pred CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE----EEEEEE-EeCCCc------
Confidence 34678887652 1 3568999999999 99999999999999999987521 123322 222221
Q ss_pred ccceEEEEEEEEEeCC-------CCCCCccceEeeccccccccccH
Q psy169 229 VVGAKLFFFKAQYLEG-------DVKDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 229 ~~g~kvfffka~~~~G-------~~~~e~~d~~WltkeEl~~~l~~ 267 (280)
.+..+++|.|....+ ....++.++.|++.+|+.+.+..
T Consensus 125 -~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 169 (191)
T 3o6z_A 125 -VTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKT 169 (191)
T ss_dssp -BCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHH
T ss_pred -cCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 235788899987642 22457899999999999987543
No 60
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.24 E-value=7.2e-12 Score=106.79 Aligned_cols=94 Identities=20% Similarity=0.085 Sum_probs=66.6
Q ss_pred EEEEEEecCC---CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 159 LVLLIKEKLG---DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 159 LyLLVk~~~g---~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
.+||++|... ..|.|.||+|+++.|||+.+||.||+.||+|+++... .+++.+.+.+.. .+..++
T Consensus 49 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~l~~~~~~~~~--------~~~~~~ 116 (194)
T 1nqz_A 49 RVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAV----TLLGELDDVFTP--------VGFHVT 116 (194)
T ss_dssp BBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGC----EEEEECCCEEET--------TTEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccce----EEEEEccCccCC--------CCeEEE
Confidence 5788887632 2578999999999999999999999999999976521 223333222111 245788
Q ss_pred EEEEEEeC-CC-C---CCCccceEeeccccc-ccc
Q psy169 236 FFKAQYLE-GD-V---KDKKLEYTWAAREEL-PKL 264 (280)
Q Consensus 236 ffka~~~~-G~-~---~~e~~d~~WltkeEl-~~~ 264 (280)
+|.|.+.. +. . ..++.++.|++.+|+ .+.
T Consensus 117 ~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 117 PVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp EEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred EEEEEecCCccccCCCccceeEEEEEEHHHhccCC
Confidence 88888763 22 2 246789999999999 654
No 61
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.24 E-value=2.2e-12 Score=108.78 Aligned_cols=97 Identities=24% Similarity=0.200 Sum_probs=67.7
Q ss_pred EEEEEEecCC--CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKEKLG--DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~~~g--~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+||+++... ..|.|.||+|+++.|||+.+||.||+.||+|+.+... .+++.+.+. +.. ....+++
T Consensus 54 ~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~----~~l~~~~~~-~~~-------~~~~~~~ 121 (182)
T 2yvp_A 54 TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETL----IPLPSFHPQ-PSF-------TAVVFHP 121 (182)
T ss_dssp EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCE----EECCCBCSC-TTT-------BCCEEEE
T ss_pred EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccE----EEEEEEeCC-CCc-------cccEEEE
Confidence 4888887522 2468999999999999999999999999999976521 122222111 111 2346778
Q ss_pred EEEEEeC--CCC---CCCccceEeeccccccccccH
Q psy169 237 FKAQYLE--GDV---KDKKLEYTWAAREELPKLLLE 267 (280)
Q Consensus 237 fka~~~~--G~~---~~e~~d~~WltkeEl~~~l~~ 267 (280)
|.|.... +.+ ..++.++.|++.+|+.+++..
T Consensus 122 f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 157 (182)
T 2yvp_A 122 FLALKARVVTPPTLEEGELLESLELPLTEVYALLAK 157 (182)
T ss_dssp EEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHT
T ss_pred EEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 8887542 433 246789999999999987543
No 62
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.20 E-value=5.1e-11 Score=108.12 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=63.7
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFF 237 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfff 237 (280)
..+|||++..+ .|.|.||+|+++.|||+.+||.||+.||+|+++.. +++ +++|.. +.. .+..+.+|
T Consensus 114 ~~vLLv~r~~~-~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~-l~~---~~~~~~--~~~-------~~~~~~~f 179 (271)
T 2a6t_A 114 QQCVLVKGWKA-SSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSS-RIN---PNEFID--MTI-------RGQNVRLY 179 (271)
T ss_dssp SEEEEEEESST-TCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTT-TCC---TTCEEE--EEE-------TTEEEEEE
T ss_pred CEEEEEEEeCC-CCeEECCcccCCCCcCHHHHHHHHHHHHhCCCcee-eee---eeeecc--CCc-------CCceEEEE
Confidence 36899998642 47899999999999999999999999999998764 221 111211 110 12345555
Q ss_pred EEEEeC--CC--C--CCCccceEeeccccccccc
Q psy169 238 KAQYLE--GD--V--KDKKLEYTWAAREELPKLL 265 (280)
Q Consensus 238 ka~~~~--G~--~--~~e~~d~~WltkeEl~~~l 265 (280)
.+.... +. + ..++.++.|++.+|+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 180 IIPGISLDTRFESRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp EECCCCTTCCCC------EEEEEEEEGGGSTTCC
T ss_pred EEEEecCcccCCCCCccceeEEEEEEHHHHHHHH
Confidence 555443 22 1 2467899999999999863
No 63
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.15 E-value=7.1e-11 Score=105.11 Aligned_cols=97 Identities=18% Similarity=0.075 Sum_probs=68.3
Q ss_pred CcEEEEEEecCC-CCCceecCCeecCC--CCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceE
Q psy169 157 KHLVLLIKEKLG-DKSHWIMPFGKRQE--GETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAK 233 (280)
Q Consensus 157 ~~LyLLVk~~~g-~~~~W~FP~G~ve~--gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~k 233 (280)
+..+||++|... ..|.|.||||+++. |||+.+||.|||.||+|+++... ..++.+.+ +.. +.. ....
T Consensus 36 ~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~----~~l~~~~~--~~r--~~~--~~~~ 105 (240)
T 3gz5_A 36 QLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYI----EQLCTVGN--NSR--DAR--GWSV 105 (240)
T ss_dssp EEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEE----EEEEEEEE--SSS--STT--SCEE
T ss_pred CcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCce----eeEEEeCC--Ccc--CCC--ceEE
Confidence 346999998732 25789999999999 99999999999999999987531 22333333 221 110 1244
Q ss_pred EEEEEEEEeCCCC---CCCccceEeeccccccc
Q psy169 234 LFFFKAQYLEGDV---KDKKLEYTWAAREELPK 263 (280)
Q Consensus 234 vfffka~~~~G~~---~~e~~d~~WltkeEl~~ 263 (280)
.++|.|.+..+.. ..++.++.|++.+|+.+
T Consensus 106 ~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 106 TVCYTALMSYQACQIQIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp EEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTT
T ss_pred EEEEEEEecccccCCCCCcccceEEecHHHccc
Confidence 5667777665543 25678999999999974
No 64
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.15 E-value=4.4e-11 Score=104.35 Aligned_cols=96 Identities=9% Similarity=0.080 Sum_probs=70.2
Q ss_pred CcEEEEEEecCCCCCceecCCeecCCCC-CHHHHHHHHHHHHhCCceEEEEe-cccceEEEEeeCCccccccccccceEE
Q psy169 157 KHLVLLIKEKLGDKSHWIMPFGKRQEGE-TMRQTAERILAEKFNKTIHARFY-GNAPCGFYKFKYPKSLQAESNVVGAKL 234 (280)
Q Consensus 157 ~~LyLLVk~~~g~~~~W~FP~G~ve~gE-tl~qaAeRel~Ee~G~~i~v~~v-g~~P~g~~~~~yp~~~~~~~~~~g~kv 234 (280)
+..+||++|. .|.|.||+|+++.|| |+.+||.||+.||+|+.+...-+ ...+++.+.+.|+ . ...+
T Consensus 55 ~~~vLl~~r~---~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~--------~~~~ 122 (212)
T 1u20_A 55 RRVLLMMMRF---DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-Q--------KCVT 122 (212)
T ss_dssp CEEEEEEEET---TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-S--------CEEE
T ss_pred CCEEEEEEeC---CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-C--------cEEE
Confidence 3467888874 468999999999999 99999999999999998652110 1124455555555 1 3578
Q ss_pred EEEEEEEeCCCC-------------CCCccceEeecccccccc
Q psy169 235 FFFKAQYLEGDV-------------KDKKLEYTWAAREELPKL 264 (280)
Q Consensus 235 fffka~~~~G~~-------------~~e~~d~~WltkeEl~~~ 264 (280)
+||.|.+..|.+ ..++.++.|++.+++.+.
T Consensus 123 ~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 123 HFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 889998875543 124567999999999764
No 65
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.15 E-value=5.5e-11 Score=103.41 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=66.3
Q ss_pred cEEEEEEec-CCC------CCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCcccccccccc
Q psy169 158 HLVLLIKEK-LGD------KSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVV 230 (280)
Q Consensus 158 ~LyLLVk~~-~g~------~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~ 230 (280)
..+|||++. .+. .+.|+||+|++++||++.+||.|||.||+|..+... .+++.+ |..|.. .
T Consensus 70 ~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~----~~l~~~-~~~~g~-------~ 137 (209)
T 1g0s_A 70 DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT----KPVLSF-LASPGG-------T 137 (209)
T ss_dssp TEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCE----EEEEEE-ESCTTT-------B
T ss_pred CEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcE----EEeEEE-ecCCCc-------c
Confidence 457777653 221 357999999999999999999999999999987522 233333 333332 2
Q ss_pred ceEEEEEEEEEeC----CC---C-CCCccceEeecccccccccc
Q psy169 231 GAKLFFFKAQYLE----GD---V-KDKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 231 g~kvfffka~~~~----G~---~-~~e~~d~~WltkeEl~~~l~ 266 (280)
...+++|.|.... |. . ..+..++.|++.+|+.+++.
T Consensus 138 ~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~ 181 (209)
T 1g0s_A 138 SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVE 181 (209)
T ss_dssp CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHH
T ss_pred CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHH
Confidence 3467888888632 21 1 23567999999999988743
No 66
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.13 E-value=2.4e-10 Score=103.59 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=67.9
Q ss_pred CcEEEEEEecCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEE
Q psy169 157 KHLVLLIKEKLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLF 235 (280)
Q Consensus 157 ~~LyLLVk~~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvf 235 (280)
+..+||++|... ..|.|.||||.++.|||+.+||.||+.||+|+.+... .....+.|.+|... .. .....+
T Consensus 55 ~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~----~l~~l~~~~~~~r~--~~--~~~~~~ 126 (273)
T 2fml_A 55 QLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQE----NIEQLHSFSRPDRD--PR--GWVVTV 126 (273)
T ss_dssp EEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGG----GEEEEEEECCTTSS--TT--SSEEEE
T ss_pred CcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcC----cEEEEEEEcCCCCC--CC--ceEEEE
Confidence 456999998742 2578999999999999999999999999999765421 11223344334321 10 124566
Q ss_pred EEEEEEeCCCC--CCCccceEeeccccccc
Q psy169 236 FFKAQYLEGDV--KDKKLEYTWAAREELPK 263 (280)
Q Consensus 236 ffka~~~~G~~--~~e~~d~~WltkeEl~~ 263 (280)
+|.|.+..+.. ..+..++.|++.+|+.+
T Consensus 127 ~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 127 SYLAFIGEEPLIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp EEEEECCCCCCCCCTTEEEEEEEEEEEETT
T ss_pred EEEEEeCCCCCCCCcceeeEEEEEhhHhhh
Confidence 77787665543 24678999999998544
No 67
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.13 E-value=1.3e-10 Score=100.87 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=64.2
Q ss_pred EEEEEEe-cCC-CCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 159 LVLLIKE-KLG-DKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 159 LyLLVk~-~~g-~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
.+|||++ +.+ +.+.|.||+|++++||++.+||.|||.||+|..+..+-+ ++.+ |..|.. .+..+++
T Consensus 78 ~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~----l~~~-~~~~~~-------~~~~~~~ 145 (212)
T 2dsc_A 78 CIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAEC----SPAV-CMDPGL-------SNCTIHI 145 (212)
T ss_dssp EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE----CCCE-ESCTTT-------BCCEEEE
T ss_pred EEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEE----eccE-EcCCCc-------cCceEEE
Confidence 4666664 322 245799999999999999999999999999998775422 1112 222221 1234555
Q ss_pred EEEEEeC--C-----C--C-CCCccceEeecccccccccc
Q psy169 237 FKAQYLE--G-----D--V-KDKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 237 fka~~~~--G-----~--~-~~e~~d~~WltkeEl~~~l~ 266 (280)
|.+.+.. + . + ..+..++.|++.+|+.+.+.
T Consensus 146 ~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 146 VTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 6565421 1 2 1 24679999999999998765
No 68
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.08 E-value=2.6e-10 Score=104.54 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=64.1
Q ss_pred EEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCCceEE----------EEecccce-EEEEee----CCccc
Q psy169 159 LVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNKTIHA----------RFYGNAPC-GFYKFK----YPKSL 223 (280)
Q Consensus 159 LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v----------~~vg~~P~-g~~~~~----yp~~~ 223 (280)
.|||+++.. .|.|.||+|+++.|||+.+||.|||.||+|+.+.+ .+....-. |.+.|. +|..
T Consensus 140 ~vLl~~r~~--~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~- 216 (292)
T 1q33_A 140 QFVAIKRKD--CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRN- 216 (292)
T ss_dssp EEEEEECTT--TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTC-
T ss_pred EEEEEEecC--CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCC-
Confidence 599999873 47899999999999999999999999999987311 11000000 333221 2211
Q ss_pred cccccccceEEEEEEEEEeCCCC--------CCCccceEeeccccccccc
Q psy169 224 QAESNVVGAKLFFFKAQYLEGDV--------KDKKLEYTWAAREELPKLL 265 (280)
Q Consensus 224 ~~~~~~~g~kvfffka~~~~G~~--------~~e~~d~~WltkeEl~~~l 265 (280)
.+ + .-...++|.++...|+. ..++.++.|++.+|+.++.
T Consensus 217 -~d-~-~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L~ 263 (292)
T 1q33_A 217 -TD-N-AWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKLY 263 (292)
T ss_dssp -CS-S-EEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCCS
T ss_pred -Cc-c-cEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcccC
Confidence 00 0 01234455555544431 2467899999999999853
No 69
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.04 E-value=2.5e-10 Score=100.54 Aligned_cols=87 Identities=13% Similarity=0.062 Sum_probs=59.9
Q ss_pred CCceecCCeecCC-CCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEEEEEeC-----
Q psy169 170 KSHWIMPFGKRQE-GETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFKAQYLE----- 243 (280)
Q Consensus 170 ~~~W~FP~G~ve~-gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffka~~~~----- 243 (280)
.+.|+||+|.++. |||+.+||.|||.||+|+.+... .-.+++.+.. .|.. .+..+++|.|.+..
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~--~l~~l~~~~~-~~g~-------~~~~~~~f~a~~~~~~~~~ 163 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPS--DLRRVATYWS-GVGL-------TGSRQTMFYTEVTDAQRSG 163 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGG--GCEEEEEEEE-C----------CCEEEEEEEEEECGGGBCC
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccC--ceEEEEEEec-CCCc-------cceEEEEEEEEECCccccc
Confidence 4689999999999 99999999999999999987210 0122333222 1211 24578888898753
Q ss_pred -CC--C-CCCccceEeecccccccccc
Q psy169 244 -GD--V-KDKKLEYTWAAREELPKLLL 266 (280)
Q Consensus 244 -G~--~-~~e~~d~~WltkeEl~~~l~ 266 (280)
|. + ..+..++.|++.+|+.+++.
T Consensus 164 ~~~~~~d~~E~~ev~wv~l~el~~~i~ 190 (218)
T 3q91_A 164 PGGGLVEEGELIEVVHLPLEGAQAFAD 190 (218)
T ss_dssp ---------CCEEEEEEEGGGHHHHHH
T ss_pred CCCCCCCCCcEEEEEEEEHHHHHHHHH
Confidence 11 1 24789999999999998753
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.97 E-value=1.3e-09 Score=96.95 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=74.9
Q ss_pred EEEEEEecCCC---CCceecCC-eecCCC------CC---HHHHHHHHHHHHhCCceE-EEEecccceEEEEeeCCcccc
Q psy169 159 LVLLIKEKLGD---KSHWIMPF-GKRQEG------ET---MRQTAERILAEKFNKTIH-ARFYGNAPCGFYKFKYPKSLQ 224 (280)
Q Consensus 159 LyLLVk~~~g~---~~~W~FP~-G~ve~g------Et---l~qaAeRel~Ee~G~~i~-v~~vg~~P~g~~~~~yp~~~~ 224 (280)
.+||.||.... .|.|.||. |+++.| |+ +.+||.|||.||+|+.+. +..-.-.+++.+.|.++..
T Consensus 72 ~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~-- 149 (235)
T 2dho_A 72 KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSD-- 149 (235)
T ss_dssp CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECS--
T ss_pred EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCC--
Confidence 47777876432 47899995 999999 88 599999999999999753 1000113445555544321
Q ss_pred ccccccceEEEEEEEEEeCCCC---CCCccceEeecccccccc----------ccHHHHHHHHhhhh
Q psy169 225 AESNVVGAKLFFFKAQYLEGDV---KDKKLEYTWAAREELPKL----------LLEDYNKNISLFLM 278 (280)
Q Consensus 225 ~~~~~~g~kvfffka~~~~G~~---~~e~~d~~WltkeEl~~~----------l~~~y~~~v~~~L~ 278 (280)
.........++|.+.. .+.+ ..++.+++|++.+||.+. +.|.+...+.+||.
T Consensus 150 -~~~~~~e~~~vf~~~~-~~~~~~~~~Ev~~~~wv~~~el~~~l~~~~~~~~~ftp~~~~i~~~~L~ 214 (235)
T 2dho_A 150 -GIWGEHEIDYILLVRM-NVTLNPDPNEIKSYCYVSKEELKELLKKAASGEIKITPWFKIIAATFLF 214 (235)
T ss_dssp -SSBEEEEEEEEEEEEC-CCCCCCCTTTEEEEEEECHHHHHHHHHHHHTTSSCBCHHHHHHHHHTHH
T ss_pred -CccceeEEEEEEEEEE-CCCCcCChHHEEEEEEEcHHHHHHHHhhccCCCcEECHhHHHHHHHHHH
Confidence 0000123456777775 4554 257899999999999764 44555566666653
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.97 E-value=1.1e-09 Score=97.98 Aligned_cols=116 Identities=11% Similarity=0.039 Sum_probs=74.7
Q ss_pred EEEEEEecCCC---CCceecCC-eecCCC------CCH---HHHHHHHHHHHhCCceE-EEEecccceEEEEeeCCcccc
Q psy169 159 LVLLIKEKLGD---KSHWIMPF-GKRQEG------ETM---RQTAERILAEKFNKTIH-ARFYGNAPCGFYKFKYPKSLQ 224 (280)
Q Consensus 159 LyLLVk~~~g~---~~~W~FP~-G~ve~g------Etl---~qaAeRel~Ee~G~~i~-v~~vg~~P~g~~~~~yp~~~~ 224 (280)
.+||.||.... .|.|.||. |+++.| |++ .+||.|||.||+|+.+. +....-.+++.+.|.+|..
T Consensus 83 ~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~-- 160 (246)
T 2pny_A 83 RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSD-- 160 (246)
T ss_dssp CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESS--
T ss_pred EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCC--
Confidence 47778876432 47899996 999999 886 99999999999999753 1100113445555554321
Q ss_pred ccccccceEEEEEEEEEeCCCCC---CCccceEeecccccccc----------ccHHHHHHHHhhhh
Q psy169 225 AESNVVGAKLFFFKAQYLEGDVK---DKKLEYTWAAREELPKL----------LLEDYNKNISLFLM 278 (280)
Q Consensus 225 ~~~~~~g~kvfffka~~~~G~~~---~e~~d~~WltkeEl~~~----------l~~~y~~~v~~~L~ 278 (280)
.........++|.+.. .+.+. .++.+++|++.+||.+. +.|.+...+.+||.
T Consensus 161 -~~~~~~e~~~vf~~~~-~~~~~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ftp~~~~i~~~~l~ 225 (246)
T 2pny_A 161 -RIWGEHEICYLLLVRK-NVTLNPDPSETKSILYLSQEELWELLEREARGEVKVTPWLRTIAERFLY 225 (246)
T ss_dssp -SSBEEEEEEEEEEEEC-CCCCCCCTTTEEEEEEECHHHHHHHHHHHHHTSSCBCHHHHHHHHHTHH
T ss_pred -CceeeeEEEEEEEEEE-CCCCCCChHHeeEEEEEeHHHHHHHHHhccCCCceECHhHHHHHHHHHH
Confidence 0000123456677765 45542 57899999999999764 44445556666553
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.85 E-value=4.1e-09 Score=92.53 Aligned_cols=84 Identities=12% Similarity=0.047 Sum_probs=58.1
Q ss_pred CCceecCCeecCCCC-CHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceEEEEEEEEEeCCCC--
Q psy169 170 KSHWIMPFGKRQEGE-TMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFFFKAQYLEGDV-- 246 (280)
Q Consensus 170 ~~~W~FP~G~ve~gE-tl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvfffka~~~~G~~-- 246 (280)
.+.|.||+|+++.|| |+.+||.||++||+|+.+....+. .+.++. .+|... .....+||.|.+..+.+
T Consensus 74 ~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~--~l~~~~-~~~~~~------~~~~~~~f~~~l~~~~~~~ 144 (217)
T 2xsq_A 74 DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVE--RTDYRS-SHVGSG------PRVVAHFYAKRLTLEELLA 144 (217)
T ss_dssp TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCC--GGGEEE-EEECSS------SSEEEEEEEEECCHHHHHH
T ss_pred CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeE--EEEEEe-ecCCCC------CeEEEEEEEEEecccccee
Confidence 368999999999999 999999999999999977631111 111111 111110 13567788888765443
Q ss_pred -----------CCCccceEeecccccc
Q psy169 247 -----------KDKKLEYTWAAREELP 262 (280)
Q Consensus 247 -----------~~e~~d~~WltkeEl~ 262 (280)
..+..+..|++.++|.
T Consensus 145 ~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 145 VEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp HHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred cccccccccccCCceeeEEEEEHHHhh
Confidence 1356788999999998
No 73
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.70 E-value=2.5e-09 Score=92.50 Aligned_cols=82 Identities=11% Similarity=0.023 Sum_probs=56.6
Q ss_pred cchhhcCCCcEEEEEEecCCCCCceecCCeecCCCC-CHHHHHHHHHHHHhCC-ceEEEEecccceEEEEeeCCcccccc
Q psy169 149 KSMQRKLDKHLVLLIKEKLGDKSHWIMPFGKRQEGE-TMRQTAERILAEKFNK-TIHARFYGNAPCGFYKFKYPKSLQAE 226 (280)
Q Consensus 149 ~SL~R~l~~~LyLLVk~~~g~~~~W~FP~G~ve~gE-tl~qaAeRel~Ee~G~-~i~v~~vg~~P~g~~~~~yp~~~~~~ 226 (280)
+...|-.-+..+|+..|- .|.|+||||+|+.|| |+.+|+.|||.||+|+ .+. ...++..+.+.||.
T Consensus 35 ~lfg~~p~r~~iLmQ~R~---~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~----~~~y~~s~~~~yp~----- 102 (214)
T 3kvh_A 35 QLFGRIPMRFSVLMQMRF---DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLT----EADYLSSHLTEGPH----- 102 (214)
T ss_dssp EETTTEEEEEEEEEEEET---TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCC----GGGEEEEEEC---------
T ss_pred ccccccchhheEEEeeee---CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeee----eeeeEEEEeccCCC-----
Confidence 344455555566666654 468999999999999 9999999999999997 343 11344455666662
Q ss_pred ccccceEEEEEEEEEeCCCC
Q psy169 227 SNVVGAKLFFFKAQYLEGDV 246 (280)
Q Consensus 227 ~~~~g~kvfffka~~~~G~~ 246 (280)
.....||.|++..|++
T Consensus 103 ----~V~LHfY~crl~~Ge~ 118 (214)
T 3kvh_A 103 ----RVVAHLYARQLTLEQL 118 (214)
T ss_dssp ----CEEEEEEEEECCHHHH
T ss_pred ----EEEEEEEEEEeeCCcc
Confidence 2678999999998876
No 74
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.66 E-value=2.7e-08 Score=91.65 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=76.7
Q ss_pred cEEEEEEecCCC---CCce-ecCCeecCCCCCHHHHHHHHHHHHhCCceEEEEecccceEEEEeeCCccccccccccceE
Q psy169 158 HLVLLIKEKLGD---KSHW-IMPFGKRQEGETMRQTAERILAEKFNKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAK 233 (280)
Q Consensus 158 ~LyLLVk~~~g~---~~~W-~FP~G~ve~gEtl~qaAeRel~Ee~G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~k 233 (280)
..+||.||.... .|.| .+|+|++..|||+.+||.||+.||+|+..... -.-.|+|.+.|.++... + .....
T Consensus 133 ~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~-~~l~~~g~i~y~~~~~~---G-~~~E~ 207 (300)
T 3dup_A 133 LHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALA-RQAIPVGAITYCMESPA---G-IKPDT 207 (300)
T ss_dssp CEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHH-TTCEEEEEEEEEEEETT---E-EEEEE
T ss_pred eEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhh-hhccccceEEEEEecCC---C-eEEEE
Confidence 357777776433 5789 79999999999999999999999999975420 01235566666543210 0 12245
Q ss_pred EEEEEEEEeCCC-C---CCCccceEeeccccccccccH------HHHHHHHhhh
Q psy169 234 LFFFKAQYLEGD-V---KDKKLEYTWAAREELPKLLLE------DYNKNISLFL 277 (280)
Q Consensus 234 vfffka~~~~G~-~---~~e~~d~~WltkeEl~~~l~~------~y~~~v~~~L 277 (280)
.|.|.+.+..+. + .+|+.++.|++.+|+.+.+.. ...-.+.+||
T Consensus 208 ~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~pg~F~p~~~lV~ldfl 261 (300)
T 3dup_A 208 LFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDFA 261 (300)
T ss_dssp EEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHHCCCBCTTHHHHHHHHH
T ss_pred EEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhcCCCcCccHHHHHHHHH
Confidence 677777665432 2 257899999999999876543 3444455554
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.64 E-value=1.1e-07 Score=88.24 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=71.5
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHh-CCceEEEEecccceEEEEeeCCccccccccccceEEEE
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKF-NKTIHARFYGNAPCGFYKFKYPKSLQAESNVVGAKLFF 236 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~-G~~i~v~~vg~~P~g~~~~~yp~~~~~~~~~~g~kvff 236 (280)
..+||+ ++.| |.||||.++.+++ ++|.||+.||+ |.++++.. ..++|.. +. .+....|
T Consensus 194 g~vLL~----~~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~----L~~v~~~--~~--------~~~~~i~ 252 (321)
T 3rh7_A 194 GAVFLA----GNET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGF----LYSVYED--KS--------DGRQNIV 252 (321)
T ss_dssp SCEEEB----CSSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEE----EEEEEEC--TT--------TCCEEEE
T ss_pred CEEEEe----eCCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeece----EEEEEEc--CC--------CceEEEE
Confidence 346777 2457 9999887655554 59999999997 99998643 3455543 32 1234568
Q ss_pred EEEEEeCCCCCCCccceEeecccccccc--ccHHHHHHHHhhhhc
Q psy169 237 FKAQYLEGDVKDKKLEYTWAAREELPKL--LLEDYNKNISLFLMD 279 (280)
Q Consensus 237 fka~~~~G~~~~e~~d~~WltkeEl~~~--l~~~y~~~v~~~L~d 279 (280)
|+|++.+|.+ .+++|++.+||+.. .++....-+++++.|
T Consensus 253 f~~~~~~g~~----~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e 293 (321)
T 3rh7_A 253 YHALASDGAP----RQGRFLRPAELAAAKFSSSATADIINRFVLE 293 (321)
T ss_dssp EEEEECSSCC----SSSEEECHHHHTTCEESSHHHHHHHHHHHHT
T ss_pred EEEEeCCCCe----eeeEEECHHHCCCcccCCHHHHHHHHHHHHH
Confidence 9999998763 79999999999986 567888888887765
No 76
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.62 E-value=1e-07 Score=84.65 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=40.3
Q ss_pred cEEEEEEecCCC---CCceecCCeecCCCCC--------------------HHHHHHHHHHHHhCCceEE
Q psy169 158 HLVLLIKEKLGD---KSHWIMPFGKRQEGET--------------------MRQTAERILAEKFNKTIHA 204 (280)
Q Consensus 158 ~LyLLVk~~~g~---~~~W~FP~G~ve~gEt--------------------l~qaAeRel~Ee~G~~i~v 204 (280)
..+||+||.... .|.|.||||+++.||+ +.+||.||+.||+|+.+..
T Consensus 24 ~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~~ 93 (232)
T 3qsj_A 24 IEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLAV 93 (232)
T ss_dssp EEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCSE
T ss_pred eEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceecc
Confidence 469999987543 4789999999999987 6999999999999997653
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.07 E-value=3.7e-06 Score=73.16 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=35.6
Q ss_pred cEEEEEEecCCCCCceecCCeecCCCCCHHHHHHHHHHHHhCC
Q psy169 158 HLVLLIKEKLGDKSHWIMPFGKRQEGETMRQTAERILAEKFNK 200 (280)
Q Consensus 158 ~LyLLVk~~~g~~~~W~FP~G~ve~gEtl~qaAeRel~Ee~G~ 200 (280)
.-+||+|+. .+.|.||||++++||+..+|+.|||.|++|.
T Consensus 73 phVLLlq~~---~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 73 PHVLLLQLG---TTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEEE---TTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cEEEEEEcC---CCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 358888875 3489999999999999999999999999994
No 78
>4fib_A Uncharacterized protein YDHK; structural genomics, PSI-biology, northeast structural genom consortium, NESG, SR518A, DUF1541, PF07563; 2.00A {Bacillus subtilis subsp} PDB: 2ky9_A
Probab=24.97 E-value=52 Score=26.00 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=22.8
Q ss_pred EEEEEEEEEeCCCCCCCccceEeeccccccccccHH
Q psy169 233 KLFFFKAQYLEGDVKDKKLEYTWAAREELPKLLLED 268 (280)
Q Consensus 233 kvfffka~~~~G~~~~e~~d~~WltkeEl~~~l~~~ 268 (280)
.+..|-..+..-.=...+.+++||..+||.+--++.
T Consensus 29 ~Tt~Y~V~y~Pt~gge~V~nHkWVVpEEi~~a~~~~ 64 (129)
T 4fib_A 29 DTTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAGDKT 64 (129)
T ss_dssp EEEEEEEEECCSSCCSCEEEEEEEEGGGBTTCTTCC
T ss_pred eeeEEEEEeEECCCCceeecceEEchhhccccCCCC
Confidence 344455555322112457999999999999875543
Done!