Query psy16902
Match_columns 90
No_of_seqs 106 out of 1535
Neff 12.4
Searched_HMMs 29240
Date Fri Aug 16 16:38:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.9 3.5E-20 1.2E-24 85.3 10.6 82 3-86 26-107 (107)
2 3knb_A Titin; IG-like, titin, 99.8 3.4E-18 1.2E-22 77.7 11.3 80 3-84 18-99 (100)
3 2cqv_A MLCK, myosin light chai 99.8 8.4E-18 2.9E-22 77.9 12.3 83 3-87 20-102 (114)
4 3qp3_A Titin; I-SET IG-like, s 99.8 1.3E-17 4.4E-22 75.9 11.6 82 3-86 21-102 (103)
5 2e7c_A Myosin-binding protein 99.8 2.5E-17 8.6E-22 76.7 12.0 82 3-87 37-118 (118)
6 2bk8_A Connectin, M1, titin he 99.8 1E-16 3.4E-21 72.3 12.9 81 3-85 14-95 (97)
7 3irg_B Obscurin-like protein 1 99.8 1.8E-17 6.3E-22 75.8 10.6 82 3-86 26-107 (107)
8 1he7_A High affinity nerve gro 99.8 6.2E-17 2.1E-21 76.1 11.4 82 4-87 14-102 (126)
9 1wwb_X Protein (brain derived 99.8 7.4E-17 2.5E-21 73.6 11.1 83 4-88 15-102 (103)
10 3puc_A Titin; I-SET IG-like do 99.8 1.3E-16 4.3E-21 72.1 11.6 80 3-84 19-98 (99)
11 1g1c_A Immunoglobulin-like dom 99.7 2.9E-16 9.8E-21 70.9 11.8 80 3-84 18-98 (99)
12 1gxe_A Myosin binding protein 99.7 6.2E-17 2.1E-21 77.4 9.4 79 3-83 31-138 (139)
13 2lu7_A Obscurin-like protein 1 99.7 6.9E-17 2.4E-21 71.3 8.9 75 3-84 9-83 (84)
14 2kkq_A Myotilin; unknown funct 99.7 6.4E-16 2.2E-20 71.8 11.3 84 3-88 28-113 (116)
15 3irg_A Titin; IG-like, titin, 99.7 5.5E-16 1.9E-20 70.0 10.9 80 3-84 18-99 (100)
16 2kdg_A Myotilin; immonoglobuli 99.7 5.9E-16 2E-20 70.0 10.9 81 3-85 18-99 (100)
17 1u2h_A APEG-1, aortic preferen 99.7 3.9E-16 1.3E-20 70.5 10.0 80 3-84 18-98 (99)
18 1wit_A Twitchin 18TH IGSF modu 99.7 3E-16 1E-20 70.2 9.5 76 3-82 15-92 (93)
19 1fhg_A Telokin; immunoglobulin 99.7 9E-16 3.1E-20 74.4 11.5 84 3-88 54-138 (154)
20 2dm2_A Palladin; beta-sandwich 99.7 4.2E-16 1.5E-20 71.7 9.8 83 3-87 21-105 (110)
21 2yuz_A Myosin-binding protein 99.7 3.5E-16 1.2E-20 71.1 9.2 79 3-87 20-98 (100)
22 1nct_A Titin; cell adhesion, g 99.7 9.6E-17 3.3E-21 73.6 6.8 79 3-83 27-105 (106)
23 1waa_A Titin; metal binding pr 99.7 3.3E-15 1.1E-19 67.0 10.8 75 3-84 18-92 (93)
24 2edj_A Roundabout homolog 2; K 99.7 1E-15 3.5E-20 69.3 8.8 79 3-86 21-100 (100)
25 2lvc_A Obscurin-like protein 1 99.7 3.3E-16 1.1E-20 70.1 6.9 65 3-70 19-83 (91)
26 3kvq_A Vascular endothelial gr 99.7 4.5E-16 1.5E-20 71.3 7.5 81 3-87 23-103 (108)
27 1wwc_A Protein (NT-3 growth fa 99.7 6.9E-15 2.4E-19 68.4 10.8 80 6-87 21-104 (118)
28 2yuv_A Myosin-binding protein 99.7 1E-14 3.5E-19 66.0 10.9 78 3-87 21-98 (100)
29 1x44_A Myosin-binding protein 99.7 6.7E-15 2.3E-19 67.0 10.3 78 3-87 20-99 (103)
30 2dm3_A KIAA0992 protein, palla 99.7 5.8E-16 2E-20 71.1 6.7 83 3-87 22-105 (110)
31 3s35_X Vascular endothelial gr 99.7 2.9E-15 1E-19 69.9 9.2 86 3-90 21-116 (122)
32 2cpc_A KIAA0657 protein; immun 99.7 1.2E-14 4.3E-19 67.0 11.2 78 4-88 27-104 (113)
33 2eo9_A Roundabout homolog 1; b 99.7 2E-15 6.9E-20 70.2 8.4 80 3-87 21-101 (118)
34 2e6p_A Obscurin-like protein 1 99.7 4.2E-15 1.4E-19 67.7 9.2 78 3-87 23-100 (104)
35 2r15_A Myomesin-1; sarcomeric 99.7 2.6E-14 9E-19 71.8 12.8 81 3-85 130-211 (212)
36 2edf_A Obscurin; beta-sandwich 99.6 3.5E-15 1.2E-19 67.9 8.5 78 3-87 21-98 (103)
37 2cr3_A Basic fibroblast growth 99.6 3.2E-15 1.1E-19 67.6 8.2 77 3-86 16-92 (99)
38 3mtr_A N-CAM-1, NCAM-1, neural 99.6 2.4E-14 8.1E-19 72.3 12.2 83 3-87 31-115 (215)
39 2edh_A Obscurin; structural ge 99.6 5E-14 1.7E-18 65.0 12.3 78 3-88 32-109 (113)
40 2ckn_A Basic fibroblast growth 99.6 4.5E-15 1.5E-19 66.7 8.2 73 3-82 22-94 (95)
41 2yr3_A Myosin light chain kina 99.6 4.5E-15 1.6E-19 67.0 8.1 75 3-82 24-98 (99)
42 2dav_A SLOW MYBP-C, myosin-bin 99.6 1.7E-15 6E-20 71.2 6.5 80 3-84 20-111 (126)
43 2eny_A Obscurin; beta-sandwich 99.6 8.7E-15 3E-19 66.8 8.4 79 3-87 21-100 (104)
44 2k1m_A Myosin-binding protein 99.6 4.3E-14 1.5E-18 63.4 10.6 74 3-83 21-94 (95)
45 4hwu_A Fibroblast growth facto 99.6 1.8E-14 6.2E-19 64.6 8.9 76 3-86 14-89 (95)
46 3rbs_A Myomesin-1; immunoglobu 99.6 1.2E-14 4.1E-19 73.4 9.2 76 3-82 129-205 (207)
47 3b43_A Titin; I-SET IG fold, e 99.6 3.1E-14 1.1E-18 80.6 11.7 83 3-87 397-479 (570)
48 2e7b_A Obscurin; IG-like domai 99.6 2.2E-14 7.4E-19 65.2 9.0 78 3-87 21-98 (103)
49 2dku_A KIAA1556 protein; beta- 99.6 6.3E-14 2.2E-18 63.6 10.4 78 3-87 21-98 (103)
50 2rik_A Titin; I-SET IG fold, p 99.6 6.5E-14 2.2E-18 73.0 11.7 79 3-83 205-283 (284)
51 2a38_A Titin; Z1Z2, structural 99.6 3.7E-14 1.3E-18 70.4 10.3 78 3-82 116-193 (194)
52 3caf_A Fibroblast growth facto 99.6 2.5E-15 8.7E-20 67.9 5.6 76 3-82 21-99 (100)
53 2dlt_A Myosin binding protein 99.6 9.7E-15 3.3E-19 66.7 7.3 65 3-70 21-85 (106)
54 2j8h_A Titin, connectin; cardi 99.6 2.7E-14 9.1E-19 71.1 9.5 79 3-83 117-196 (197)
55 2y25_A Myomesin; structural pr 99.6 6.6E-14 2.2E-18 73.9 11.2 81 3-85 235-316 (317)
56 3rbg_A Cytotoxic and regulator 99.6 8.5E-14 2.9E-18 65.3 10.5 83 3-88 14-105 (124)
57 3lcy_A Titin; A-BAND, IG tande 99.6 7.4E-14 2.5E-18 69.3 10.9 82 3-86 20-101 (197)
58 2cr6_A KIAA1556 protein, obscu 99.6 3.4E-15 1.2E-19 69.2 5.4 80 3-88 26-106 (115)
59 3cx2_A Myosin-binding protein 99.6 1E-13 3.6E-18 63.5 10.2 79 3-83 17-107 (108)
60 2edk_A Myosin-binding protein 99.6 2.3E-15 7.8E-20 68.3 4.5 77 3-86 21-101 (101)
61 3m45_A Cell adhesion molecule 99.6 1.2E-13 4E-18 63.0 10.3 81 3-86 19-108 (108)
62 2rik_A Titin; I-SET IG fold, p 99.6 4.4E-13 1.5E-17 69.9 13.6 84 3-88 112-195 (284)
63 1pd6_A Cardiac MYBP-C;, myosin 99.6 1.1E-13 3.6E-18 63.2 9.9 73 3-82 29-102 (104)
64 2e6q_A Obscurin-like protein 1 99.6 2.4E-13 8.1E-18 62.9 11.0 78 3-87 21-108 (112)
65 2jll_A NCAM2, neural cell adhe 99.6 1.9E-13 6.5E-18 73.9 11.8 83 3-87 13-102 (389)
66 3b43_A Titin; I-SET IG fold, e 99.6 1.7E-13 5.9E-18 77.6 11.9 84 3-88 304-387 (570)
67 3lcy_A Titin; A-BAND, IG tande 99.6 2.1E-13 7.2E-18 67.7 10.9 80 3-84 116-196 (197)
68 2dm7_A KIAA1556 protein; beta- 99.6 2.8E-13 9.4E-18 62.0 10.3 77 3-87 21-97 (108)
69 3bfo_A Mucosa-associated lymph 99.6 1.1E-13 3.6E-18 61.7 8.7 70 3-83 16-86 (91)
70 2eo1_A OBSCN protein, cDNA FLJ 99.6 1.3E-13 4.4E-18 62.5 9.0 77 3-86 24-100 (102)
71 2wv3_A Neuroplastin; igcam, me 99.6 1.2E-12 4E-17 65.0 13.1 79 3-83 105-189 (190)
72 2edn_A Myosin-binding protein 99.6 6.6E-14 2.3E-18 65.2 7.9 81 3-85 25-117 (118)
73 1z9m_A GAPA225; nectin-like, I 99.5 5E-13 1.7E-17 64.1 10.3 82 3-88 51-142 (145)
74 3b5h_A Cervical EMMPRIN, HAB18 99.5 1.8E-12 6.1E-17 64.0 12.5 80 3-84 96-183 (184)
75 2wim_A N-CAM 2, NCAM2, neural 99.5 2.7E-13 9.1E-18 70.9 9.9 80 3-86 207-286 (291)
76 2va4_A NCAM2, N-CAM 2, neural 99.5 3.6E-13 1.2E-17 66.7 9.8 80 3-86 17-96 (192)
77 2cry_A KIN of IRRE-like protei 99.5 8E-15 2.7E-19 68.5 3.5 82 2-85 25-114 (122)
78 2ifg_A High affinity nerve gro 99.5 2.1E-13 7.2E-18 73.3 9.3 82 3-86 259-347 (347)
79 3uto_A Twitchin; kinase, muscl 99.5 1.1E-12 3.7E-17 74.8 12.4 78 3-82 495-572 (573)
80 2v5t_A NCAM2, N-CAM 2, neural 99.5 5.9E-13 2E-17 65.7 10.1 77 3-83 111-187 (189)
81 2yd1_A Tyrosine-protein phosph 99.5 4.7E-12 1.6E-16 63.8 13.4 81 3-85 19-103 (212)
82 2yd6_A PTPRD protein; hydrolas 99.5 9.6E-13 3.3E-17 66.3 10.9 81 4-86 122-206 (212)
83 2a38_A Titin; Z1Z2, structural 99.5 8.9E-13 3E-17 65.4 10.6 79 3-83 18-98 (194)
84 2j8h_A Titin, connectin; cardi 99.5 1.3E-12 4.4E-17 65.0 10.9 81 3-85 17-99 (197)
85 2nzi_A Titin; IG-domain, FNIII 99.5 1.5E-12 5.2E-17 68.5 11.6 82 4-87 118-200 (305)
86 2v44_A NCAM2, neural cell adhe 99.5 2E-12 6.7E-17 64.0 11.3 82 3-87 15-98 (189)
87 3so5_A LIG-3, leucine-rich rep 99.5 1.3E-12 4.5E-17 59.7 10.0 80 3-82 23-111 (112)
88 3kld_A Contactin 4, axcam, BIG 99.5 2.3E-13 7.9E-18 73.9 8.4 76 3-84 308-383 (384)
89 1gl4_B Basement membrane-speci 99.5 7.8E-13 2.7E-17 59.5 8.5 75 3-83 23-97 (98)
90 1qz1_A Neural cell adhesion mo 99.5 8E-13 2.7E-17 69.1 9.7 78 3-84 209-290 (291)
91 4fqp_A Poliovirus receptor; im 99.5 4.4E-13 1.5E-17 70.9 8.6 77 3-87 230-307 (313)
92 3mjg_X Beta-type platelet-deri 99.5 1.8E-12 6.2E-17 67.8 10.7 83 3-87 194-281 (289)
93 2x1w_L Vascular endothelial gr 99.5 5.6E-13 1.9E-17 67.4 8.5 85 3-89 118-212 (213)
94 2va4_A NCAM2, N-CAM 2, neural 99.5 5.3E-12 1.8E-16 62.4 11.8 78 3-82 107-191 (192)
95 2y23_A Myomesin; structural pr 99.5 5.9E-13 2E-17 70.1 8.6 76 3-82 234-310 (312)
96 2v9t_A Roundabout homolog 1; s 99.5 2E-13 6.8E-18 63.3 6.1 79 3-83 22-108 (117)
97 3laf_A Deleted in colorectal c 99.5 3.9E-13 1.3E-17 73.0 8.0 79 3-86 325-403 (403)
98 2wv3_A Neuroplastin; igcam, me 99.5 2.7E-12 9.3E-17 63.6 10.2 76 5-88 18-95 (190)
99 2nzi_A Titin; IG-domain, FNIII 99.5 3.1E-12 1.1E-16 67.3 10.9 82 3-86 17-100 (305)
100 3grw_A Fibroblast growth facto 99.5 2E-12 6.8E-17 66.1 9.7 84 3-88 127-222 (241)
101 1rhf_A Tyrosine-protein kinase 99.5 2.6E-12 8.8E-17 63.2 9.8 83 3-87 15-100 (182)
102 3rbs_A Myomesin-1; immunoglobu 99.5 6.5E-12 2.2E-16 63.4 11.4 67 3-70 15-83 (207)
103 2v9r_A Roundabout homolog 1; p 99.5 8.1E-13 2.8E-17 66.3 8.1 81 3-88 124-206 (212)
104 2yd6_A PTPRD protein; hydrolas 99.5 8.5E-12 2.9E-16 62.9 11.7 80 3-84 19-100 (212)
105 4fa8_A Secreted protein BARF1; 99.5 5E-13 1.7E-17 67.4 7.1 72 3-76 119-194 (203)
106 2iep_A Muscle-specific kinase 99.5 7.5E-13 2.6E-17 65.6 7.5 79 3-86 113-192 (192)
107 4fa8_A Secreted protein BARF1; 99.5 8.6E-13 2.9E-17 66.6 7.8 85 3-87 6-108 (203)
108 2yd1_A Tyrosine-protein phosph 99.4 2.5E-12 8.5E-17 64.8 9.5 76 4-85 124-201 (212)
109 2o26_X MAST/stem cell growth f 99.4 1.1E-12 3.9E-17 68.6 8.5 82 3-86 201-290 (290)
110 2jll_A NCAM2, neural cell adhe 99.4 7.3E-12 2.5E-16 67.8 11.5 82 3-86 113-196 (389)
111 2r15_A Myomesin-1; sarcomeric 99.4 1.6E-11 5.5E-16 61.6 12.0 76 4-81 16-92 (212)
112 2ens_A Advanced glycosylation 99.4 1.7E-13 5.8E-18 61.5 4.2 61 3-74 23-83 (96)
113 1cs6_A Axonin-1; neural cell a 99.4 1.9E-12 6.6E-17 69.9 8.9 75 3-83 307-381 (382)
114 3r4d_A CEA-related cell adhesi 99.4 2.8E-12 9.5E-17 64.2 8.8 79 3-86 123-202 (208)
115 3bp6_B Programmed cell death 1 99.4 6.3E-12 2.2E-16 62.8 10.0 81 3-85 15-104 (202)
116 3s97_C Contactin-1; carbonic a 99.4 1.9E-12 6.6E-17 64.4 8.1 75 3-83 126-200 (201)
117 1epf_A NCAM, protein (neural c 99.4 1.6E-11 5.4E-16 60.8 11.2 83 3-87 15-102 (191)
118 2yd9_A Receptor-type tyrosine- 99.4 7.9E-12 2.7E-16 65.9 10.4 80 3-85 19-101 (304)
119 2c5d_C AXL oncogene, tyrosine- 99.4 7E-12 2.4E-16 62.3 9.6 84 3-87 15-108 (195)
120 2ny1_B T-cell surface glycopro 99.4 1.8E-12 6.2E-17 64.0 7.4 73 3-87 110-182 (184)
121 3khq_A B-cell antigen receptor 99.4 6.2E-12 2.1E-16 59.7 8.8 81 3-87 30-120 (133)
122 3ejj_X Macrophage colony-stimu 99.4 1.1E-11 3.6E-16 64.8 10.5 82 3-86 199-283 (289)
123 1itb_B Type 1 interleukin-1 re 99.4 8.3E-12 2.9E-16 66.0 10.1 79 3-83 222-313 (315)
124 3jz7_A MCAR, CAR, coxsackievir 99.4 8.6E-13 2.9E-17 66.1 6.0 77 3-85 134-213 (214)
125 3qr2_A Basigin; CD147, EMMPRIN 99.4 7.6E-12 2.6E-16 59.4 8.9 70 3-74 34-116 (137)
126 2v5m_A Dscam; neurobiology SPL 99.4 8.6E-12 2.9E-16 67.5 10.0 68 3-82 320-387 (388)
127 3qs7_E FL cytokine receptor; i 99.4 1.4E-11 4.9E-16 68.0 10.9 81 3-86 61-141 (423)
128 1vca_A VCAM-D1,2, human vascul 99.4 2.8E-11 9.7E-16 60.8 11.1 79 4-87 15-93 (202)
129 1bih_A Hemolin; insect immunit 99.4 6.1E-12 2.1E-16 68.2 9.3 73 3-82 322-394 (395)
130 2id5_A Lingo-1, leucine rich r 99.4 1.1E-12 3.7E-17 73.0 6.0 76 3-83 398-476 (477)
131 3qs9_E FL cytokine receptor; i 99.4 1.1E-12 3.7E-17 74.1 6.0 80 3-88 339-418 (527)
132 2yd9_A Receptor-type tyrosine- 99.4 1.1E-11 3.9E-16 65.3 9.4 77 3-87 218-294 (304)
133 3grw_A Fibroblast growth facto 99.4 4.6E-12 1.6E-16 64.7 7.7 80 3-84 28-108 (241)
134 2ec8_A MAST/stem cell growth f 99.4 2.4E-12 8.1E-17 72.2 7.0 84 3-88 326-415 (524)
135 2iep_A Muscle-specific kinase 99.4 7.9E-12 2.7E-16 61.8 8.2 78 3-84 20-99 (192)
136 2wim_A N-CAM 2, NCAM2, neural 99.4 5.2E-11 1.8E-15 62.2 11.7 82 3-87 17-100 (291)
137 3ojm_B Fibroblast growth facto 99.4 2E-12 6.7E-17 65.6 6.1 80 3-84 32-112 (231)
138 4fom_A Poliovirus receptor-rel 99.4 8E-13 2.8E-17 69.7 4.6 78 3-87 225-303 (308)
139 1f97_A Junction adhesion molec 99.4 6.2E-12 2.1E-16 63.0 7.5 80 3-84 117-207 (212)
140 2y23_A Myomesin; structural pr 99.4 1.4E-11 4.6E-16 64.9 9.0 72 3-75 14-85 (312)
141 2v44_A NCAM2, neural cell adhe 99.4 1.4E-11 4.7E-16 61.0 8.4 74 3-81 109-184 (189)
142 2vr9_A Roundabout 1, ROBO; imm 99.4 6E-12 2.1E-16 63.4 7.2 76 3-83 121-205 (217)
143 3mj8_L Stimulatory hamster ant 99.3 1.6E-11 5.6E-16 61.7 8.6 79 3-83 13-108 (213)
144 2xot_A Amphoterin-induced prot 99.3 2.4E-11 8.2E-16 65.8 9.4 76 3-85 259-338 (361)
145 3p3y_A Neurofascin; IG domains 99.3 1.6E-11 5.6E-16 66.6 8.8 78 3-84 325-403 (404)
146 1epf_A NCAM, protein (neural c 99.3 1.2E-11 4E-16 61.2 7.6 75 3-82 113-189 (191)
147 3k0w_A Mucosa-associated lymph 99.3 1.6E-11 5.6E-16 62.1 8.2 71 3-84 131-202 (218)
148 1pko_A Myelin oligodendrocyte 99.3 2.2E-10 7.5E-15 54.5 11.5 81 3-85 19-122 (139)
149 2c5d_C AXL oncogene, tyrosine- 99.3 5.1E-11 1.7E-15 59.2 9.7 71 3-82 119-191 (195)
150 3p3y_A Neurofascin; IG domains 99.3 1.1E-11 3.8E-16 67.3 7.6 79 3-86 235-313 (404)
151 3ojm_B Fibroblast growth facto 99.3 2.2E-11 7.6E-16 61.7 8.3 82 4-87 132-224 (231)
152 1bih_A Hemolin; insect immunit 99.3 1.1E-11 3.7E-16 67.2 7.4 83 3-87 225-310 (395)
153 3zyj_A Leucine-rich repeat-con 99.3 1.3E-11 4.3E-16 68.3 7.6 79 3-87 354-436 (440)
154 4i0k_A CD276 antigen; immunogl 99.3 1.7E-11 5.7E-16 62.0 7.5 83 3-87 123-209 (222)
155 1f2q_A High affinity immunoglo 99.3 2.4E-11 8.4E-16 59.6 7.9 76 3-87 98-174 (176)
156 1ry7_B FGFR-3, fibroblast grow 99.3 9.3E-12 3.2E-16 66.3 6.8 83 3-87 235-330 (334)
157 1jhl_L IGG1-kappa D11.15 FV (l 99.3 1E-10 3.4E-15 53.5 9.4 67 3-71 14-94 (108)
158 3kld_A Contactin 4, axcam, BIG 99.3 1.2E-11 4.2E-16 67.2 7.1 79 3-87 218-297 (384)
159 3laf_A Deleted in colorectal c 99.3 2.5E-11 8.4E-16 66.0 8.3 79 4-86 235-313 (403)
160 3d9a_L Light chain of hyhel10 99.3 6E-11 2E-15 59.7 9.1 79 3-83 14-107 (213)
161 3q0h_A T cell immunoreceptor w 99.3 5.4E-11 1.9E-15 55.2 8.3 82 3-89 16-113 (117)
162 3sbw_C Programmed cell death 1 99.3 4.2E-11 1.5E-15 60.5 8.3 83 3-87 129-214 (222)
163 1f97_A Junction adhesion molec 99.3 2.2E-11 7.6E-16 61.0 7.2 80 3-88 14-107 (212)
164 3v2a_R Vascular endothelial gr 99.3 2.4E-13 8.2E-18 78.7 0.0 81 3-87 679-759 (772)
165 3udw_C Poliovirus receptor; PV 99.3 4.4E-11 1.5E-15 55.1 7.5 83 3-86 13-118 (118)
166 2fbo_J V1V2;, variable region- 99.3 2.7E-11 9.3E-16 62.1 7.2 67 3-72 149-237 (250)
167 3dmk_A DOWN syndrome cell adhe 99.3 3.9E-10 1.3E-14 66.2 12.7 83 3-87 442-529 (816)
168 3oq3_B IFN-alpha/beta binding 99.3 1.3E-10 4.6E-15 62.0 10.0 78 3-86 141-226 (329)
169 1rhf_A Tyrosine-protein kinase 99.3 1.8E-10 6.1E-15 56.6 9.7 69 3-82 111-181 (182)
170 3nl4_L Antigen binding fragmen 99.3 1E-10 3.6E-15 58.8 9.0 68 3-72 14-95 (213)
171 3r06_A Anti-mouse CD3epsilon a 99.3 1E-10 3.5E-15 58.8 8.8 68 3-72 14-95 (213)
172 3u83_A Poliovirus receptor-rel 99.3 1.6E-11 5.6E-16 65.2 6.1 76 3-86 245-322 (331)
173 3k0w_A Mucosa-associated lymph 99.3 1.1E-10 3.7E-15 59.1 8.9 71 3-84 31-102 (218)
174 1gsm_A Madcam-1, mucosal addre 99.3 2.3E-10 8E-15 58.1 9.8 77 3-87 20-98 (210)
175 1qz1_A Neural cell adhesion mo 99.3 5.2E-10 1.8E-14 58.5 11.5 82 3-86 15-101 (291)
176 3p2t_A Leukocyte immunoglobuli 99.3 4.9E-11 1.7E-15 59.5 7.3 77 3-83 17-95 (196)
177 1e07_A Carcinoembryonic antige 99.3 1.3E-10 4.5E-15 66.6 9.8 68 3-83 572-639 (642)
178 2ec8_A MAST/stem cell growth f 99.3 6.6E-11 2.3E-15 66.4 8.4 84 3-88 224-313 (524)
179 2y25_A Myomesin; structural pr 99.3 1.3E-10 4.3E-15 61.4 9.1 76 4-81 112-197 (317)
180 3sgj_C Human FCG3A receptor; r 99.3 5.3E-11 1.8E-15 59.9 7.3 75 3-86 101-176 (204)
181 1hng_A CD2; T lymphocyte adhes 99.3 5.6E-11 1.9E-15 58.6 7.2 80 3-85 9-100 (176)
182 2ocw_A Polymeric-immunoglobuli 99.3 2.2E-10 7.7E-15 64.9 10.4 84 3-86 455-548 (585)
183 1fnl_A Low affinity immunoglob 99.3 7.3E-11 2.5E-15 57.9 7.6 72 3-84 101-174 (175)
184 3jz7_A MCAR, CAR, coxsackievir 99.3 1E-10 3.4E-15 58.6 8.2 84 3-88 13-124 (214)
185 1lk3_L 9D7 light chain; antige 99.2 1.7E-10 5.7E-15 58.0 9.0 79 3-83 13-106 (210)
186 3qs7_E FL cytokine receptor; i 99.2 4.2E-11 1.4E-15 66.1 7.1 80 3-87 240-326 (423)
187 1ugn_A LIR1, leukocyte immunog 99.2 2.9E-10 9.9E-15 56.8 9.6 67 3-72 113-181 (198)
188 1ry7_B FGFR-3, fibroblast grow 99.2 1.5E-11 5.1E-16 65.5 5.1 79 4-84 137-216 (334)
189 4frw_A Poliovirus receptor-rel 99.2 2.3E-11 7.9E-16 60.9 5.5 78 3-82 131-209 (218)
190 1f3r_B FV antibody fragment; I 99.2 1.1E-10 3.9E-15 60.4 8.3 80 3-84 152-245 (257)
191 3bp6_B Programmed cell death 1 99.2 2.4E-11 8.1E-16 60.8 5.5 78 3-84 116-193 (202)
192 4f80_A Butyrophilin subfamily 99.2 4.3E-11 1.5E-15 60.8 6.4 81 3-85 131-214 (226)
193 3s96_B 3B5H10 FAB light chain; 99.2 1.4E-10 4.6E-15 58.5 8.1 79 3-83 13-115 (218)
194 1mqk_L Antibody 7E2 FV fragmen 99.2 4.2E-10 1.4E-14 52.5 9.0 79 3-83 14-108 (120)
195 3tv3_L PGT128 light chain, IG 99.2 1.5E-10 5.2E-15 58.2 8.0 77 3-83 13-105 (211)
196 3zyi_A Leucine-rich repeat-con 99.2 3.5E-11 1.2E-15 66.8 6.0 78 3-87 365-446 (452)
197 2vr9_A Roundabout 1, ROBO; imm 99.2 4.7E-11 1.6E-15 60.2 5.9 79 3-83 22-105 (217)
198 2q20_A VK1 O18/O8 germline lig 99.2 6.5E-10 2.2E-14 50.9 9.2 66 3-70 16-95 (109)
199 3oq3_B IFN-alpha/beta binding 99.2 5.3E-10 1.8E-14 59.7 10.1 78 3-82 241-328 (329)
200 1wio_A CD4, T-cell surface gly 99.2 1.3E-10 4.4E-15 62.7 7.7 79 3-83 189-292 (363)
201 3ry4_A Low affinity immunoglob 99.2 1.2E-10 4.2E-15 56.7 7.0 62 3-73 98-159 (170)
202 2v5t_A NCAM2, N-CAM 2, neural 99.2 3.8E-10 1.3E-14 55.6 8.6 67 3-74 15-83 (189)
203 1qfw_M FV, antibody (anti beta 99.2 4.4E-10 1.5E-14 51.4 8.2 67 2-70 13-93 (108)
204 3sob_L Antibody light chain; b 99.2 4.1E-10 1.4E-14 57.4 8.9 68 3-72 37-118 (237)
205 3sgj_C Human FCG3A receptor; r 99.2 1.5E-10 5.3E-15 58.2 7.2 68 3-84 20-88 (204)
206 1nbq_A JAM, junctional adhesio 99.2 7.3E-12 2.5E-16 62.6 2.4 71 3-75 120-198 (209)
207 1i8k_A Epidermal growth factor 99.2 1.1E-09 3.6E-14 50.0 9.3 67 2-70 13-93 (107)
208 4hwn_A FC receptor-like A; FCR 99.2 1.7E-10 5.7E-15 52.9 6.6 61 2-72 19-84 (108)
209 1nbq_A JAM, junctional adhesio 99.2 6.4E-11 2.2E-15 59.2 5.5 80 3-88 17-110 (209)
210 2ocw_A Polymeric-immunoglobuli 99.2 8.7E-10 3E-14 62.6 10.5 84 3-88 13-115 (585)
211 2d3v_A Leukocyte immunoglobuli 99.2 1E-10 3.4E-15 58.4 6.0 78 3-84 17-96 (196)
212 1eaj_A Coxsackie virus and ade 99.2 2.6E-10 8.9E-15 52.9 7.0 80 3-84 18-125 (126)
213 1hng_A CD2; T lymphocyte adhes 99.2 2E-11 6.7E-16 60.2 3.3 62 6-80 111-172 (176)
214 1cs6_A Axonin-1; neural cell a 99.2 7.3E-11 2.5E-15 63.8 5.7 77 3-87 220-296 (382)
215 4gos_A V-SET domain-containing 99.2 6.3E-10 2.1E-14 52.2 8.2 77 4-82 19-118 (125)
216 2c1o_A IGK-C protein; FAB frag 99.2 7.7E-10 2.6E-14 57.0 9.2 68 3-72 51-137 (254)
217 1q0x_L FAB 9B1, light chain; a 99.2 6.3E-10 2.2E-14 55.9 8.7 68 3-72 13-97 (212)
218 1dr9_A B7-1 (CD80), T lymphocy 99.2 8.3E-10 2.8E-14 55.1 9.0 75 4-79 120-196 (201)
219 3dmk_A DOWN syndrome cell adhe 99.2 2.7E-10 9.4E-15 66.8 8.2 83 3-87 632-716 (816)
220 1moe_A Anti-CEA MAB T84.66; an 99.2 6E-10 2.1E-14 57.0 8.6 80 3-84 14-112 (240)
221 3auv_A SC-DSFV derived from th 99.2 1.2E-09 4E-14 57.2 9.8 69 2-72 24-106 (276)
222 2e27_L Anti-ciguatoxin antibod 99.2 1.1E-09 3.8E-14 51.0 8.7 66 3-70 16-95 (119)
223 2v5m_A Dscam; neurobiology SPL 99.2 2.1E-10 7.2E-15 62.1 7.2 80 3-86 17-104 (388)
224 2znx_A SCFV; fluorotryptohpan, 99.2 1E-09 3.5E-14 56.4 9.2 68 3-72 14-95 (242)
225 2ghw_B Anti-SARS SCFV antibody 99.2 1.2E-09 3.9E-14 56.2 9.4 79 3-83 148-241 (247)
226 2qsq_A Carcinoembryonic antige 99.1 1.4E-09 4.9E-14 50.1 8.7 77 3-84 13-109 (111)
227 4dkd_C Macrophage colony-stimu 99.1 1.2E-09 4E-14 57.2 9.4 81 3-85 199-282 (292)
228 3bkj_L WO2 IGG2A FAB fragment 99.1 1.2E-09 3.9E-14 56.4 9.1 68 3-72 47-133 (252)
229 3umt_A SCFV heavy chain and li 99.1 8.5E-10 2.9E-14 57.1 8.6 81 3-85 151-246 (256)
230 4dep_C Interleukin-1 receptor 99.1 4.9E-10 1.7E-14 60.0 7.9 76 3-84 133-217 (349)
231 4dzb_B Vbeta2 (MAIT T cell rec 99.1 1.2E-09 4.1E-14 56.1 9.0 66 3-70 14-99 (246)
232 3kg5_A B-cell antigen receptor 99.1 3.5E-09 1.2E-13 50.3 9.9 83 3-88 31-123 (134)
233 2ywz_A NEW antigen receptor va 99.1 2.5E-09 8.4E-14 49.1 9.2 65 3-69 13-87 (111)
234 1e07_A Carcinoembryonic antige 99.1 1.2E-09 4.1E-14 62.7 9.7 79 3-86 480-559 (642)
235 1uct_A Immunoglobulin alpha FC 99.1 5.4E-10 1.8E-14 56.8 7.5 63 3-71 118-180 (218)
236 1i3g_L Antibody FV fragment; a 99.1 2.4E-09 8.3E-14 49.1 9.0 67 2-70 16-96 (111)
237 2d3v_A Leukocyte immunoglobuli 99.1 1.2E-10 4.2E-15 58.1 5.0 67 3-72 112-180 (196)
238 3pv7_A B7-H6, IG-like domain-c 99.1 3.9E-10 1.3E-14 57.9 7.0 84 3-88 16-122 (248)
239 3esu_F Antibody 14B7* light ch 99.1 2.8E-09 9.7E-14 54.8 10.2 68 3-72 17-98 (250)
240 3nfj_J T cell receptor beta ch 99.1 2.5E-09 8.5E-14 54.9 9.9 65 3-69 14-95 (245)
241 3o4o_C Interleukin-1 receptor 99.1 4.8E-10 1.7E-14 59.8 7.4 78 3-84 133-220 (339)
242 1nqb_A Single-chain antibody f 99.1 2E-09 6.9E-14 55.8 9.5 80 3-84 134-233 (256)
243 1jbj_A CD3 epsilon and gamma e 99.1 9.6E-11 3.3E-15 58.2 4.3 65 3-80 12-77 (186)
244 1zox_A CLM-1; IG-superfamily, 99.1 9.5E-10 3.3E-14 50.6 7.3 82 3-86 14-112 (113)
245 2oz4_A Intercellular adhesion 99.1 5.1E-11 1.8E-15 61.8 3.3 67 3-84 198-264 (265)
246 3p2t_A Leukocyte immunoglobuli 99.1 2.9E-10 1E-14 56.7 5.9 67 3-72 112-179 (196)
247 3mj6_A Junctional adhesion mol 99.1 2.8E-10 9.6E-15 58.9 6.0 81 3-83 131-236 (268)
248 3b5h_A Cervical EMMPRIN, HAB18 99.1 2E-09 7E-14 53.0 8.8 74 3-88 11-86 (184)
249 4f80_A Butyrophilin subfamily 99.1 9E-09 3.1E-13 52.3 11.4 79 3-83 17-118 (226)
250 3qs9_E FL cytokine receptor; i 99.1 4E-09 1.4E-13 59.8 10.9 77 3-82 61-137 (527)
251 2gi7_A GPVI protein; IG-like d 99.1 5.3E-10 1.8E-14 55.3 6.7 68 3-83 20-89 (184)
252 1jbj_A CD3 epsilon and gamma e 99.1 3.1E-10 1.1E-14 56.3 5.8 59 4-74 121-179 (186)
253 1oll_A NK receptor; immune sys 99.1 4.9E-10 1.7E-14 55.6 6.4 62 3-71 111-172 (188)
254 2xzc_L FAB A.17 light chain; i 99.1 1.3E-09 4.3E-14 55.0 8.0 69 3-72 13-96 (216)
255 1hnf_A CD2; T lymphocyte adhes 99.1 7.2E-10 2.5E-14 55.1 6.9 79 3-84 12-104 (182)
256 1itb_B Type 1 interleukin-1 re 99.1 1.6E-09 5.5E-14 57.3 8.6 66 4-74 117-189 (315)
257 3r08_E T-cell surface glycopro 99.1 1.8E-11 6.3E-16 53.5 0.9 54 3-69 12-66 (82)
258 3ux9_B SCFV antibody; five hel 99.1 3.1E-09 1.1E-13 54.9 9.4 68 3-72 15-98 (256)
259 3uzq_A Anti-dengue MAB 4E11; d 99.1 9.9E-10 3.4E-14 56.7 7.5 81 3-85 146-245 (253)
260 2rcj_C Light chain; immunoglob 99.1 1.1E-09 3.8E-14 61.5 8.2 68 3-72 13-94 (523)
261 2vsd_A CHIR AB1; immune system 99.1 1.4E-09 4.8E-14 49.5 7.2 63 2-70 16-78 (105)
262 2coq_A NEW antigen receptor va 99.1 3.4E-09 1.2E-13 48.4 8.5 65 3-69 13-87 (108)
263 1sy6_A T-cell surface glycopro 99.1 2.8E-10 9.7E-15 57.3 5.2 63 4-73 127-192 (204)
264 1svz_A Immunoglobulin;, single 99.1 2.4E-09 8.3E-14 55.0 8.8 80 3-84 14-113 (247)
265 2wng_A Tyrosine-protein phosph 99.1 2.1E-10 7E-15 61.1 4.9 76 3-80 233-315 (327)
266 4dep_C Interleukin-1 receptor 99.1 2.6E-09 8.9E-14 57.2 9.1 81 3-87 20-118 (349)
267 3o4o_C Interleukin-1 receptor 99.1 3.4E-10 1.2E-14 60.4 5.6 83 3-87 31-120 (339)
268 2wng_A Tyrosine-protein phosph 99.1 1E-09 3.5E-14 58.4 7.4 82 3-86 16-117 (327)
269 1j05_L T84.66 antibody, anti-C 99.1 1.3E-09 4.4E-14 50.0 6.9 67 2-70 13-97 (111)
270 1qok_A MFE-23 recombinant anti 99.1 3.6E-09 1.2E-13 55.6 9.3 78 3-83 175-267 (282)
271 2yc1_B Single chain antibody f 99.1 9.4E-09 3.2E-13 49.5 10.0 80 3-84 29-123 (146)
272 3rjd_A High affinity immunoglo 99.1 2.7E-09 9.2E-14 55.0 8.6 73 3-84 95-167 (262)
273 1f3r_B FV antibody fragment; I 99.1 6E-09 2.1E-13 54.0 9.9 68 3-72 13-102 (257)
274 2v9r_A Roundabout homolog 1; p 99.1 8.6E-10 2.9E-14 55.2 6.5 79 3-83 22-108 (212)
275 3r4d_A CEA-related cell adhesi 99.1 5E-09 1.7E-13 52.4 9.3 78 3-85 12-109 (208)
276 4ffy_L DENV1-E111 single chain 99.1 4.9E-09 1.7E-13 49.2 8.7 81 3-85 14-113 (126)
277 1neu_A Myelin P0 protein; stru 99.1 1.6E-09 5.6E-14 50.3 7.0 85 3-87 12-122 (124)
278 2oz4_A Intercellular adhesion 99.1 5.9E-09 2E-13 54.1 9.5 75 3-85 16-98 (265)
279 1fnl_A Low affinity immunoglob 99.1 1.2E-09 3.9E-14 53.6 6.5 58 3-72 20-78 (175)
280 2rcj_C Light chain; immunoglob 99.0 1.3E-09 4.6E-14 61.2 7.5 76 3-81 232-313 (523)
281 1xt5_A Variable region-contain 99.0 1.1E-09 3.9E-14 51.6 6.2 82 3-85 17-134 (135)
282 2if7_A SLAM family member 6; N 99.0 1.7E-09 5.7E-14 54.0 7.1 78 3-85 11-107 (193)
283 2d9q_B Granulocyte colony-stim 99.0 6.8E-10 2.3E-14 59.0 5.9 81 3-86 13-99 (313)
284 2pet_A Lutheran blood group gl 99.0 4.3E-10 1.5E-14 57.0 4.9 82 3-87 13-117 (231)
285 3v2a_R Vascular endothelial gr 99.0 7.1E-09 2.4E-13 60.4 10.4 86 3-88 237-330 (772)
286 2j6e_L IGM, FAB light chain; a 99.0 1.7E-09 5.9E-14 55.0 7.1 68 3-72 32-115 (234)
287 3rjd_A High affinity immunoglo 99.0 4.2E-09 1.4E-13 54.3 8.6 60 3-74 14-74 (262)
288 1xau_A B- and T-lymphocyte att 99.0 2.9E-08 1E-12 45.5 10.1 80 3-83 27-115 (122)
289 2v5y_A Receptor-type tyrosine- 99.0 6.1E-10 2.1E-14 64.9 5.9 83 3-87 177-263 (731)
290 1wio_A CD4, T-cell surface gly 99.0 4.7E-10 1.6E-14 60.5 5.1 72 3-86 109-180 (363)
291 1ccz_A Protein (CD58); LFA-3, 99.0 8.6E-10 2.9E-14 54.2 5.6 76 3-85 8-95 (171)
292 3s97_C Contactin-1; carbonic a 99.0 1.3E-10 4.5E-15 57.7 2.7 69 3-75 21-93 (201)
293 3u6r_L Antibody 1:7 (light cha 99.0 2E-08 6.7E-13 48.2 10.1 79 3-83 13-105 (143)
294 3juy_B 3B3 single chain varian 99.0 6.3E-09 2.2E-13 53.8 9.0 67 3-71 162-243 (256)
295 1za6_B IGG heavy chain; immuno 99.0 3.8E-09 1.3E-13 56.7 8.4 79 3-83 13-114 (344)
296 2fbo_J V1V2;, variable region- 99.0 8.5E-10 2.9E-14 56.5 5.7 80 3-85 15-132 (250)
297 3moq_A NEW antigen receptor va 99.0 1.4E-08 4.9E-13 47.7 9.4 67 3-71 13-89 (126)
298 1z7z_I Intercellular adhesion 99.0 5.2E-10 1.8E-14 61.7 5.2 66 3-73 99-167 (450)
299 2ghw_B Anti-SARS SCFV antibody 99.0 6.3E-09 2.1E-13 53.4 8.9 66 3-70 15-103 (247)
300 1h5b_A Murine T cell receptor 99.0 3.5E-09 1.2E-13 48.7 7.2 67 3-72 14-95 (113)
301 1uct_A Immunoglobulin alpha FC 99.0 3.7E-10 1.3E-14 57.4 4.2 78 3-84 21-102 (218)
302 3sbw_C Programmed cell death 1 99.0 8.2E-09 2.8E-13 52.1 9.1 82 3-87 14-118 (222)
303 3rrq_A Protein PD-1, programme 99.0 5E-09 1.7E-13 49.4 7.8 81 3-85 14-116 (129)
304 1nfd_E H57 FAB; complex (immun 99.0 6.8E-10 2.3E-14 55.8 5.1 65 3-69 12-90 (212)
305 3r0n_A Poliovirus receptor-rel 99.0 3.7E-09 1.3E-13 49.5 7.3 77 3-81 15-127 (128)
306 2zg1_A Sialic acid-binding IG- 99.0 3.3E-09 1.1E-13 53.3 7.6 65 3-75 136-204 (214)
307 2pet_A Lutheran blood group gl 99.0 2E-09 6.8E-14 54.6 6.8 65 4-70 132-211 (231)
308 2gjj_A A21 single-chain antibo 99.0 5.5E-09 1.9E-13 54.4 8.6 81 3-85 18-119 (264)
309 2p1y_A Bispecific alpha/beta T 99.0 1.6E-09 5.6E-14 55.3 6.5 67 3-71 140-222 (238)
310 2ifg_A High affinity nerve gro 99.0 9.1E-11 3.1E-15 63.1 1.9 80 3-86 171-251 (347)
311 2gi7_A GPVI protein; IG-like d 99.0 2.6E-09 8.8E-14 52.8 6.9 63 3-72 106-168 (184)
312 2q87_A CMRF35-H antigen; all-b 99.0 8.4E-09 2.9E-13 47.2 8.1 67 3-71 9-91 (110)
313 1eeq_A Kappa-4 immunoglobulin 99.0 4.8E-09 1.6E-13 48.3 7.3 66 3-70 14-99 (114)
314 3gkz_A Anti-methamphetamine si 99.0 6.8E-09 2.3E-13 53.7 8.5 79 3-83 154-248 (257)
315 3nl4_H Antigen binding fragmen 99.0 2.5E-08 8.5E-13 50.3 10.3 70 3-72 12-99 (215)
316 1p6f_A NKP46, natural cytotoxi 99.0 4.4E-09 1.5E-13 54.4 7.6 75 3-84 114-191 (242)
317 1f2q_A High affinity immunoglo 99.0 1.3E-09 4.6E-14 53.4 5.4 60 3-74 17-77 (176)
318 1x9q_A SCFV, 4M5.3 anti-fluore 99.0 9E-09 3.1E-13 53.6 8.8 69 2-72 27-114 (268)
319 1c1e_H Catalytic antibody 1E9 99.0 1.2E-08 4E-13 51.6 9.0 67 3-71 13-102 (219)
320 1nqb_A Single-chain antibody f 99.0 1.2E-08 4.1E-13 52.9 9.2 68 3-72 13-103 (256)
321 3eow_R Poliovirus receptor; im 99.0 3E-10 1E-14 57.5 3.1 84 3-87 12-118 (221)
322 1pew_A JTO2, A lambda-6 type i 99.0 3.4E-09 1.2E-13 48.5 6.3 66 3-70 13-94 (109)
323 2oyp_A Hepatitis A virus cellu 99.0 3E-09 1E-13 48.4 6.1 79 3-83 7-107 (109)
324 1oaq_L Light chain; antibody, 99.0 2.5E-08 8.6E-13 46.3 9.3 80 3-84 13-110 (120)
325 1sq2_N Novel antigen receptor; 99.0 1.5E-08 5.3E-13 46.6 8.5 65 3-69 13-87 (113)
326 3auv_A SC-DSFV derived from th 99.0 1.8E-08 6.3E-13 52.7 9.7 66 3-70 147-235 (276)
327 1dlf_L Anti-dansyl immunoglobu 99.0 1.2E-08 4.3E-13 46.9 8.1 66 3-70 14-98 (113)
328 2or8_A Hepatitis A virus cellu 99.0 2.1E-09 7E-14 49.5 5.4 79 3-83 10-110 (116)
329 1ugn_A LIR1, leukocyte immunog 99.0 3.6E-10 1.2E-14 56.4 3.0 78 3-84 17-97 (198)
330 2if7_A SLAM family member 6; N 99.0 1.2E-08 4E-13 50.9 8.3 59 5-76 123-184 (193)
331 2gki_A Nuclease; anti-DNA anti 99.0 7.6E-09 2.6E-13 54.6 8.0 67 3-71 172-258 (291)
332 4ei6_B Vbeta16 XV19 type II na 99.0 1.5E-08 5.2E-13 51.9 8.9 64 3-69 15-97 (245)
333 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 9.4E-09 3.2E-13 53.2 8.0 68 3-72 16-100 (256)
334 3o3u_N Maltose-binding peripla 99.0 1.1E-09 3.6E-14 62.3 4.8 80 3-86 379-471 (581)
335 3vh8_G Killer cell immunoglobu 99.0 1.7E-09 5.7E-14 57.4 5.2 79 3-86 231-315 (316)
336 4gjt_B Poliovirus receptor-rel 99.0 1.2E-08 4.1E-13 47.6 7.6 81 3-85 13-118 (123)
337 2ptt_A CD48 antigen; CD244, CD 99.0 5E-09 1.7E-13 47.9 6.2 78 3-84 16-108 (110)
338 3ejj_X Macrophage colony-stimu 99.0 4E-09 1.4E-13 55.1 6.5 76 3-83 102-180 (289)
339 3ry4_A Low affinity immunoglob 98.9 8.2E-09 2.8E-13 50.2 7.2 67 3-83 17-84 (170)
340 1nkr_A P58-CL42 KIR; inhibitor 98.9 5.9E-09 2E-13 52.2 6.8 65 3-70 20-85 (201)
341 3pl6_D MBP peptide / T-cell re 98.9 1.2E-08 4.2E-13 53.0 8.2 79 3-84 39-138 (268)
342 1qgc_4 Protein (immunoglobulin 98.9 8E-09 2.7E-13 56.8 7.9 68 3-72 14-99 (438)
343 1op3_H FAB 2G12, heavy chain; 98.9 3.1E-08 1E-12 50.4 9.5 68 3-72 13-103 (225)
344 2d9c_A Signal-regulatory prote 98.9 4.1E-08 1.4E-12 46.5 9.4 82 3-86 21-123 (136)
345 3ux9_B SCFV antibody; five hel 98.9 1.8E-08 6.3E-13 52.0 8.7 66 3-70 147-235 (256)
346 1vca_A VCAM-D1,2, human vascul 98.9 2E-09 7E-14 54.1 5.0 83 3-87 104-200 (202)
347 2x1w_L Vascular endothelial gr 98.9 2.6E-09 8.8E-14 53.9 5.3 64 3-72 20-88 (213)
348 3esu_F Antibody 14B7* light ch 98.9 1.2E-08 4.2E-13 52.4 7.9 65 3-69 144-231 (250)
349 3vh8_G Killer cell immunoglobu 98.9 1.9E-08 6.6E-13 53.3 8.8 68 3-73 131-199 (316)
350 3mjg_X Beta-type platelet-deri 98.9 7.6E-09 2.6E-13 54.1 7.1 64 2-73 12-76 (289)
351 1qok_A MFE-23 recombinant anti 98.9 1.4E-08 4.9E-13 53.3 8.1 68 3-72 39-129 (282)
352 4fmk_A Poliovirus receptor-rel 98.9 3.5E-09 1.2E-13 53.2 5.5 73 3-77 14-112 (225)
353 1hxm_B Gamma-delta T-cell rece 98.9 5.1E-08 1.8E-12 50.1 9.7 66 3-70 14-102 (242)
354 3mj8_L Stimulatory hamster ant 98.9 3.5E-09 1.2E-13 53.2 5.3 73 4-78 128-207 (213)
355 1nkr_A P58-CL42 KIR; inhibitor 98.9 1.3E-08 4.3E-13 51.0 7.2 63 3-70 120-183 (201)
356 2wbj_D OB TCR; transmembrane, 98.9 2.1E-08 7.2E-13 52.5 8.3 66 3-70 37-122 (279)
357 2p1y_A Bispecific alpha/beta T 98.9 1.4E-08 4.8E-13 51.8 7.5 67 3-72 13-97 (238)
358 3d9a_H Heavy chain of hyhel10 98.9 1.8E-08 6.2E-13 50.6 7.7 66 3-70 13-100 (210)
359 2fbj_H IGA-kappa J539 FAB (hea 98.9 9.2E-08 3.1E-12 48.5 10.3 68 3-72 13-103 (220)
360 1ncn_A T lymphocyte activation 98.9 1.3E-08 4.5E-13 46.5 6.5 70 3-76 7-97 (110)
361 1z7z_I Intercellular adhesion 98.9 5.2E-08 1.8E-12 53.9 10.0 76 3-84 201-282 (450)
362 4dkd_C Macrophage colony-stimu 98.9 2.8E-09 9.7E-14 55.7 4.7 76 3-84 102-181 (292)
363 3juy_B 3B3 single chain varian 98.9 2.3E-08 8E-13 51.7 8.1 66 3-70 19-107 (256)
364 2aw2_A B and T lymphocyte atte 98.9 8.8E-08 3E-12 43.5 8.8 77 4-83 25-109 (120)
365 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 3.3E-09 1.1E-13 53.7 4.8 72 3-78 140-217 (222)
366 2o26_X MAST/stem cell growth f 98.9 3.7E-09 1.3E-13 55.4 5.1 75 3-83 104-182 (290)
367 2zg1_A Sialic acid-binding IG- 98.9 2.6E-08 8.9E-13 50.0 7.9 80 3-84 13-122 (214)
368 1b6u_A KIR2DL3, P58 killer cel 98.9 7.6E-09 2.6E-13 54.0 6.0 80 2-86 118-203 (257)
369 1oll_A NK receptor; immune sys 98.9 4.1E-09 1.4E-13 52.3 4.8 77 3-83 16-94 (188)
370 1q0x_L FAB 9B1, light chain; a 98.9 7E-09 2.4E-13 52.1 5.7 68 4-73 129-204 (212)
371 3u83_A Poliovirus receptor-rel 98.9 5E-09 1.7E-13 55.7 5.4 83 3-87 27-132 (331)
372 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 4.8E-08 1.6E-12 49.5 8.8 68 3-72 13-105 (222)
373 3t0v_A Immunoglobulin variable 98.9 1E-07 3.5E-12 44.6 9.3 67 3-71 13-95 (123)
374 3d9a_L Light chain of hyhel10 98.9 1.6E-09 5.6E-14 54.4 3.3 69 4-74 126-203 (213)
375 2ny1_B T-cell surface glycopro 98.9 6.7E-10 2.3E-14 54.8 1.9 68 3-72 8-92 (184)
376 1lk3_L 9D7 light chain; antige 98.9 3.2E-09 1.1E-13 53.3 4.4 68 4-73 125-201 (210)
377 1n26_A IL-6 receptor alpha cha 98.9 1.1E-08 3.8E-13 54.7 6.6 77 3-87 19-96 (325)
378 3gkz_A Anti-methamphetamine si 98.9 1.1E-07 3.8E-12 49.1 10.1 66 3-70 21-108 (257)
379 3bn9_D E2 FAB heavy chain; ant 98.9 9.9E-08 3.4E-12 49.7 9.8 68 3-72 13-103 (257)
380 1u3h_A T-cell receptor alpha-c 98.4 2.5E-10 8.4E-15 52.4 0.0 67 2-70 11-93 (110)
381 3q5y_A TCR N15 beta; IG, T cel 98.9 5.4E-08 1.8E-12 49.8 8.6 63 3-68 15-95 (240)
382 4frw_A Poliovirus receptor-rel 98.9 2.1E-08 7.3E-13 50.1 7.0 73 3-77 12-108 (218)
383 2rgs_A I, IG gamma-2B heavy ch 98.9 1.3E-09 4.6E-14 55.2 2.7 69 3-73 24-101 (218)
384 1qgc_4 Protein (immunoglobulin 98.9 3.7E-08 1.3E-12 54.2 8.4 66 3-70 231-319 (438)
385 1i1r_A GP130, interleukin-6 re 98.9 5.4E-08 1.8E-12 51.5 8.8 63 3-70 17-86 (303)
386 2otu_A FV light chain variable 98.9 7.9E-08 2.7E-12 44.3 8.4 67 3-71 14-99 (115)
387 3omz_A Human vdelta1 gamma del 98.9 9.3E-09 3.2E-13 53.2 5.7 80 3-84 15-118 (259)
388 3uzq_A Anti-dengue MAB 4E11; d 98.8 6.6E-08 2.2E-12 49.9 8.8 79 3-83 14-116 (253)
389 2nms_A CMRF35-like-molecule 1; 98.8 3.3E-07 1.1E-11 42.9 10.6 82 3-86 15-113 (124)
390 1dr9_A B7-1 (CD80), T lymphocy 98.8 3.7E-09 1.3E-13 52.7 3.9 82 3-85 7-107 (201)
391 2xzc_L FAB A.17 light chain; i 98.8 9.2E-09 3.2E-13 51.9 5.3 68 4-73 128-204 (216)
392 1p4b_L Antibody variable light 98.8 7.9E-08 2.7E-12 45.7 8.2 67 3-71 18-101 (135)
393 1igt_B IGG2A intact antibody - 98.8 2.1E-09 7.3E-14 59.4 3.2 70 3-74 253-331 (444)
394 3bqu_C 3H6 FAB light chain; be 98.8 1E-09 3.4E-14 55.9 1.7 68 3-72 36-117 (233)
395 3bae_H WO2 IGG2A FAB fragment 98.8 5.5E-08 1.9E-12 49.6 8.1 68 3-72 13-104 (228)
396 1dee_B IGM RF 2A2; FAB-IBP com 98.8 1.5E-07 5.1E-12 47.9 9.6 67 3-71 13-102 (223)
397 2dru_A Chimera of CD48 antigen 98.8 4E-08 1.4E-12 48.6 7.2 79 3-85 12-105 (180)
398 1tvd_A T cell receptor, ES204 98.8 2.5E-08 8.4E-13 46.0 6.0 66 3-70 13-98 (116)
399 1pz5_B Heavy chain of FAB (SYA 98.8 2.8E-07 9.4E-12 46.6 10.3 68 3-72 13-105 (220)
400 3umt_A SCFV heavy chain and li 98.8 7E-08 2.4E-12 49.9 8.2 79 3-83 15-120 (256)
401 3fku_X Neutralizing antibody F 98.8 4.8E-08 1.7E-12 51.3 7.6 67 3-71 152-234 (280)
402 2j6e_L IGM, FAB light chain; a 98.8 5.9E-09 2E-13 53.1 4.0 71 4-76 149-227 (234)
403 3bj9_1 Immunoglobulin IOTA cha 98.8 1.1E-07 3.7E-12 43.8 8.0 80 3-84 11-114 (116)
404 1nfd_E H57 FAB; complex (immun 98.8 4.5E-10 1.5E-14 56.5 -0.2 68 4-73 127-201 (212)
405 1mju_H Immunoglobulin MS6-12; 98.8 9.8E-08 3.3E-12 48.7 8.5 66 3-70 13-101 (227)
406 1c1e_H Catalytic antibody 1E9 98.8 7.1E-09 2.4E-13 52.4 4.2 73 3-78 137-214 (219)
407 1olz_A Semaphorin 4D; developm 98.8 8.9E-09 3.1E-13 59.9 5.0 81 3-88 546-631 (663)
408 3bp6_A Programmed cell death p 98.8 4.6E-07 1.6E-11 41.9 10.8 67 3-71 12-96 (117)
409 3qib_D 2B4 beta chain; IG doma 98.8 5.9E-08 2E-12 50.5 7.6 65 3-70 40-123 (270)
410 2i24_N NEW antigen receptor PB 98.8 1.2E-07 4E-12 44.3 7.9 65 3-69 13-87 (121)
411 1svz_A Immunoglobulin;, single 98.8 4.1E-08 1.4E-12 50.5 6.9 66 3-70 140-228 (247)
412 2h32_A Immunoglobulin IOTA cha 98.8 3.6E-08 1.2E-12 46.3 6.2 78 3-82 13-113 (126)
413 2or7_A T-cell immunoglobulin a 98.8 1.9E-08 6.6E-13 46.3 5.2 80 3-84 10-110 (115)
414 3bik_B Programmed cell death p 98.8 5.9E-07 2E-11 42.6 10.9 80 3-84 22-123 (134)
415 1bec_A 14.3.D T cell antigen r 98.8 2.2E-07 7.4E-12 47.6 9.5 66 3-71 12-95 (238)
416 2xqy_G A13-D6.3 monoclonal ant 98.8 1.2E-07 4E-12 49.5 8.6 67 3-71 19-108 (261)
417 3d9a_H Heavy chain of hyhel10 98.8 8E-09 2.7E-13 51.9 4.1 72 3-77 131-207 (210)
418 2vol_A Murine IGG FC; FC, zinc 98.8 6.1E-09 2.1E-13 52.4 3.6 69 3-73 16-93 (207)
419 1fo0_A Protein (BM3.3 T cell r 98.8 4.1E-08 1.4E-12 45.3 6.2 65 3-69 13-95 (116)
420 1fo0_B Protein (BM3.3 T cell r 98.8 3.5E-08 1.2E-12 45.3 5.9 65 3-70 14-96 (112)
421 3mj6_A Junctional adhesion mol 98.8 2.4E-08 8.1E-13 51.7 5.9 80 3-82 18-120 (268)
422 3s96_B 3B5H10 FAB light chain; 98.8 2.1E-08 7.3E-13 50.5 5.6 70 5-76 136-212 (218)
423 2c1o_A IGK-C protein; FAB frag 98.8 9.1E-09 3.1E-13 53.0 4.0 67 5-73 169-244 (254)
424 3pv7_A B7-H6, IG-like domain-c 98.8 1.2E-07 3.9E-12 48.8 8.1 77 4-82 132-224 (248)
425 4fqp_A Poliovirus receptor; im 98.8 3.7E-08 1.3E-12 52.2 6.3 82 3-86 13-118 (313)
426 1nko_A Sialic acid binding IG- 98.8 1.2E-07 4E-12 44.7 7.5 84 3-86 19-129 (132)
427 3tv3_L PGT128 light chain, IG 98.8 6.2E-09 2.1E-13 52.3 3.1 72 4-77 125-204 (211)
428 2znx_A SCFV; fluorotryptohpan, 98.8 9.1E-08 3.1E-12 49.2 7.4 66 3-70 135-222 (242)
429 1dee_B IGM RF 2A2; FAB-IBP com 98.8 3.7E-07 1.3E-11 46.4 9.6 73 3-77 139-220 (223)
430 1moe_A Anti-CEA MAB T84.66; an 98.8 8.7E-08 3E-12 49.0 7.3 65 3-69 132-219 (240)
431 3sob_L Antibody light chain; b 98.7 2.6E-08 8.7E-13 50.7 5.3 70 4-75 149-227 (237)
432 1hzh_H IGG, immunoglobulin hea 98.7 9.9E-08 3.4E-12 53.0 7.9 68 3-72 13-103 (457)
433 2jju_A Signal regulatory prote 98.7 3.9E-08 1.3E-12 46.1 5.4 66 3-70 16-96 (127)
434 1i1c_A IGG2A, IG gamma-2A chai 98.7 2.2E-09 7.6E-14 55.3 1.2 70 2-73 29-107 (239)
435 3m8o_H Immunoglobulin A1 heavy 98.7 6.6E-07 2.2E-11 45.3 10.3 66 3-70 13-103 (221)
436 2hp4_A T-cell surface glycopro 98.7 3.1E-07 1.1E-11 42.3 8.3 67 2-70 12-99 (114)
437 3nl4_L Antigen binding fragmen 98.7 1.4E-07 4.7E-12 47.4 7.6 63 4-68 128-198 (213)
438 2atp_B T-cell surface glycopro 98.7 1.5E-07 5E-12 43.3 7.1 66 3-70 11-101 (115)
439 4fom_A Poliovirus receptor-rel 98.7 1.7E-08 5.9E-13 53.2 4.4 73 3-76 127-200 (308)
440 1b6u_A KIR2DL3, P58 killer cel 98.7 8.5E-08 2.9E-12 50.0 6.9 65 3-70 19-84 (257)
441 2edo_A CD48 antigen; beta-sand 98.7 1.3E-08 4.4E-13 47.5 3.4 80 3-85 17-111 (121)
442 1l6x_A Immunoglobulin gamma-1 98.7 2E-08 6.7E-13 50.5 4.3 70 3-74 16-94 (207)
443 3kgr_A LAIR-1, hlair1, leukocy 98.7 3.3E-08 1.1E-12 45.1 4.6 66 3-71 21-88 (106)
444 3fku_X Neutralizing antibody F 98.7 1.6E-07 5.5E-12 49.3 7.8 66 3-70 13-101 (280)
445 2gjj_A A21 single-chain antibo 98.7 2.2E-07 7.6E-12 48.4 8.2 66 3-70 151-239 (264)
446 1hnf_A CD2; T lymphocyte adhes 98.7 1.5E-07 5.2E-12 46.8 7.2 61 7-80 117-177 (182)
447 2z35_A T-cell receptor alpha-c 98.7 1.1E-07 3.7E-12 43.6 6.3 64 3-68 13-92 (112)
448 3noi_A Natural cytotoxicity tr 98.7 4.3E-08 1.5E-12 45.5 4.9 65 3-69 20-102 (120)
449 2yz1_A Tyrosine-protein phosph 98.7 1.5E-07 5.1E-12 43.6 6.8 67 3-71 20-101 (120)
450 3eow_R Poliovirus receptor; im 98.7 5.2E-08 1.8E-12 49.2 5.6 78 4-82 129-210 (221)
451 4fmk_A Poliovirus receptor-rel 98.7 6.1E-08 2.1E-12 48.6 5.8 78 4-82 135-215 (225)
452 2w59_A IGY FCU3-4; immunoglobu 98.7 1.2E-08 4E-13 52.3 3.1 68 4-73 27-102 (231)
453 2qhl_A Novel immune-type recep 98.7 8.5E-08 2.9E-12 43.9 5.8 67 3-70 12-98 (111)
454 3to4_D NKT vbeta2 (mouse varia 98.7 5.5E-08 1.9E-12 50.3 5.7 66 3-71 14-97 (253)
455 1hkf_A NKP44, NK cell activati 98.7 1.2E-06 4.1E-11 40.9 10.2 69 3-71 23-107 (122)
456 1ypz_F T-cell receptor gamma c 98.7 2.2E-07 7.5E-12 47.5 7.8 66 3-70 14-101 (230)
457 1c5d_H Monoclonal antibody aga 98.7 1.4E-07 4.8E-12 47.7 7.0 67 3-71 13-101 (215)
458 1sy6_A T-cell surface glycopro 98.7 1.7E-08 6E-13 50.8 3.6 55 3-69 16-70 (204)
459 2dru_A Chimera of CD48 antigen 98.7 3.1E-08 1.1E-12 49.0 4.5 60 5-77 115-174 (180)
460 1x9q_A SCFV, 4M5.3 anti-fluore 98.7 2.8E-07 9.6E-12 48.0 8.2 66 3-70 164-254 (268)
461 1p6f_A NKP46, natural cytotoxi 98.7 4.1E-08 1.4E-12 50.7 4.9 65 3-71 19-83 (242)
462 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.7 3.2E-07 1.1E-11 47.5 8.2 66 4-72 151-234 (256)
463 2wzp_D Camelid VHH5; baseplate 98.7 1.2E-06 4.1E-11 40.8 9.5 66 3-70 13-101 (123)
464 1a2y_B IGG1-kappa D1.3 FV (hea 98.7 4.4E-07 1.5E-11 41.8 7.9 66 3-70 13-100 (116)
465 1dn0_B IGM-kappa cold agglutin 98.7 5.7E-07 1.9E-11 46.0 8.9 65 3-69 13-99 (232)
466 4i0k_A CD276 antigen; immunogl 98.7 6E-09 2.1E-13 52.6 1.6 67 2-70 7-94 (222)
467 1ccz_A Protein (CD58); LFA-3, 98.7 3.1E-08 1E-12 48.7 4.0 57 9-78 109-165 (171)
468 2fbj_H IGA-kappa J539 FAB (hea 98.7 2.5E-07 8.5E-12 46.9 7.4 71 3-75 135-212 (220)
469 1n4x_H Immunoglobulin heavy ch 98.7 9.6E-07 3.3E-11 40.9 8.8 66 3-70 13-101 (120)
470 1iga_A IGA1; immunoglobulin; N 98.7 8E-07 2.7E-11 49.7 9.9 68 3-72 14-104 (475)
471 4esk_A LAIR-1, mlair1, leukocy 98.7 3.6E-07 1.2E-11 41.4 7.2 63 3-72 21-87 (102)
472 1mju_H Immunoglobulin MS6-12; 98.7 2.6E-08 8.9E-13 50.8 3.7 78 4-86 135-219 (227)
473 3m8o_H Immunoglobulin A1 heavy 98.7 2.6E-07 8.8E-12 46.8 7.4 63 4-73 137-212 (221)
474 3b9v_A Heavy chain variable do 98.7 4.8E-07 1.6E-11 41.9 7.6 66 3-70 13-101 (120)
475 1pz5_B Heavy chain of FAB (SYA 98.7 2.9E-08 9.8E-13 50.2 3.7 73 3-78 138-215 (220)
476 4ety_A LAIR-1, mlair1, leukocy 98.7 2.9E-07 9.9E-12 42.9 6.8 75 3-84 21-101 (118)
477 1ypz_E T cell receptor delta, 98.7 4.8E-07 1.6E-11 45.6 8.1 65 3-70 14-93 (207)
478 1dn0_B IGM-kappa cold agglutin 98.6 6.2E-07 2.1E-11 45.9 8.5 77 4-82 139-225 (232)
479 2p45_B Antibody CAB-RN05; seMe 98.6 8.3E-07 2.8E-11 41.3 8.3 66 3-70 15-103 (123)
480 1igt_B IGG2A intact antibody - 98.6 7.1E-07 2.4E-11 49.4 9.2 68 3-72 13-103 (444)
481 1j05_H T84.66 antibody, anti-C 98.6 1.1E-06 3.6E-11 40.8 8.5 66 3-70 13-101 (121)
482 1kxv_C Camelid VHH domain CAB1 98.6 1.1E-06 3.8E-11 40.8 8.4 66 3-70 13-100 (121)
483 2yc1_A Single chain antibody f 98.6 5.7E-07 1.9E-11 41.5 7.4 66 3-70 13-101 (117)
484 2gki_A Nuclease; anti-DNA anti 98.6 2E-07 6.7E-12 49.2 6.4 67 3-71 35-124 (291)
485 3liz_H 4C3 monoclonal antibody 98.6 7.6E-07 2.6E-11 46.1 8.4 66 3-70 13-101 (253)
486 3r8b_B G5-8, enterotoxin type 98.6 2.3E-06 7.8E-11 40.0 9.3 66 3-70 18-101 (125)
487 2xt1_B Camelid VHH 9; viral pr 98.6 1.4E-06 4.8E-11 40.5 8.5 64 3-68 15-101 (121)
488 1mfa_H IGG1-lambda Se155-4 FAB 98.6 1.1E-06 3.9E-11 40.7 8.1 66 3-70 13-101 (120)
489 3bae_H WO2 IGG2A FAB fragment 98.6 1.2E-07 4.2E-12 48.3 5.2 73 3-78 143-220 (228)
490 3r06_A Anti-mouse CD3epsilon a 98.6 1.1E-07 3.7E-12 47.8 4.9 67 4-72 126-201 (213)
491 1hxm_A Gamma-delta T-cell rece 98.6 1.1E-06 3.7E-11 45.1 8.5 66 3-70 14-97 (229)
492 1iga_A IGA1; immunoglobulin; N 98.6 1.7E-07 5.7E-12 52.4 5.9 74 3-80 260-341 (475)
493 1oga_E TRBC1, T-cell receptor 98.6 8.4E-07 2.9E-11 45.9 8.1 65 3-70 16-98 (252)
494 1sjv_A R9; camelids antibody, 98.6 3.6E-07 1.2E-11 42.0 6.1 66 2-69 12-99 (114)
495 1yc7_A Anti-VSG immunoglobulin 98.6 1.2E-06 4.2E-11 40.9 7.9 66 3-70 13-100 (124)
496 1nez_G T-cell surface glycopro 98.6 8.1E-07 2.8E-11 41.8 7.3 65 3-69 17-106 (128)
497 3i84_A Cervical EMMPRIN; CD147 98.6 6.1E-07 2.1E-11 40.4 6.5 60 3-69 20-79 (98)
498 4dzb_B Vbeta2 (MAIT T cell rec 98.6 2.3E-07 7.7E-12 47.6 5.7 66 5-72 140-219 (246)
499 1xed_A Polymeric-immunoglobuli 98.6 2.2E-06 7.6E-11 39.6 8.6 80 3-84 13-111 (117)
500 1mqk_H Antibody 7E2 FV fragmen 98.6 3.7E-06 1.3E-10 39.4 9.5 66 3-70 13-101 (127)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.86 E-value=3.5e-20 Score=85.25 Aligned_cols=82 Identities=24% Similarity=0.289 Sum_probs=71.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. |.|.|.+.|++++..+....++..........|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 26 ~~G~~~~l~C~~~--G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 103 (107)
T 3knb_B 26 VSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEE--EecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEE
Confidence 4689999999998 99999999999999998877777666666778999999999999999999999999988888988
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.++|
T Consensus 104 ~~pP 107 (107)
T 3knb_B 104 LEPP 107 (107)
T ss_dssp EC--
T ss_pred EcCC
Confidence 8765
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.81 E-value=3.4e-18 Score=77.74 Aligned_cols=80 Identities=20% Similarity=0.389 Sum_probs=68.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. |.|.|.+.|++++..+.... ++..........|.+.++...|.|.|.|.+.|..|.......|
T Consensus 18 ~~G~~~~l~C~~~--g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 95 (100)
T 3knb_A 18 DEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNI 95 (100)
T ss_dssp ETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eCCCeEEEEEEEE--EecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEE
Confidence 4689999999998 99999999999999886543 5555555666789999999999999999999999998888888
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.|.+
T Consensus 96 ~V~~ 99 (100)
T 3knb_A 96 HIRS 99 (100)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8754
No 3
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.80 E-value=8.4e-18 Score=77.86 Aligned_cols=83 Identities=17% Similarity=0.269 Sum_probs=71.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.|.|.+.|++++..+....++..........|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 20 ~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 97 (114)
T 2cqv_A 20 RAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTV 97 (114)
T ss_dssp ETTCCEEEEEEEE--SSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEE
T ss_pred eCCCeEEEEEEEE--cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEE
Confidence 4689999999998 99999999999998887766776665555667999999999999999999999998888888888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.|.
T Consensus 98 ~~~p~ 102 (114)
T 2cqv_A 98 VDKPD 102 (114)
T ss_dssp ECSCS
T ss_pred ECCCC
Confidence 76543
No 4
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.79 E-value=1.3e-17 Score=75.91 Aligned_cols=82 Identities=32% Similarity=0.510 Sum_probs=71.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 21 ~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 98 (103)
T 3qp3_A 21 PCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98 (103)
T ss_dssp ETTCCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4688999999998 99999999999999988777776666666678999999999999999999999999888888888
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.+.+
T Consensus 99 ~~~~ 102 (103)
T 3qp3_A 99 TGGD 102 (103)
T ss_dssp ECC-
T ss_pred ECCC
Confidence 7653
No 5
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.5e-17 Score=76.70 Aligned_cols=82 Identities=21% Similarity=0.249 Sum_probs=69.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+. ..+...........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 37 ~~G~~~~l~C~~~--g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 37 KVGEQLNLVVPFQ--GKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp ESSSCEEEEEEEE--EESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEE
T ss_pred ECCCEEEEEEEEc--cCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEE
Confidence 3589999999998 99999999999999886 34444444455567999999999999999999999998888889988
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.|.
T Consensus 114 ~~~P~ 118 (118)
T 2e7c_A 114 VEKAG 118 (118)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 87763
No 6
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.78 E-value=1e-16 Score=72.30 Aligned_cols=81 Identities=28% Similarity=0.434 Sum_probs=69.5
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. +. |.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 14 ~~G~~v~l~C~~~--g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 91 (97)
T 2bk8_A 14 EEGGHVKYVCKIE--NYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELF 91 (97)
T ss_dssp CTTCCEEEEEEEE--SCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred cCCCcEEEEEEEe--ccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEE
Confidence 4689999999998 86 89999999999988877777665556666799999999999999999999999888888888
Q ss_pred EecC
Q psy16902 82 VQGR 85 (90)
Q Consensus 82 v~~~ 85 (90)
|.+.
T Consensus 92 V~~~ 95 (97)
T 2bk8_A 92 VKGV 95 (97)
T ss_dssp ETTT
T ss_pred EEec
Confidence 7643
No 7
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.78 E-value=1.8e-17 Score=75.83 Aligned_cols=82 Identities=24% Similarity=0.289 Sum_probs=69.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.|.+.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 26 ~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 26 VSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEe--ecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 4688999999997 88999999999999887777766655666667999999999999999999999998888888888
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.++|
T Consensus 104 ~~~P 107 (107)
T 3irg_B 104 LEPP 107 (107)
T ss_dssp EC--
T ss_pred EcCC
Confidence 7764
No 8
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.77 E-value=6.2e-17 Score=76.11 Aligned_cols=82 Identities=21% Similarity=0.285 Sum_probs=66.8
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeC-------CeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKF-------GFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.+..+.|.|.+. |.|.|.+.|++++..+....+....... ....|.+..+...|.|.|+|.+.|..|....
T Consensus 14 ~~~~~~l~c~v~--G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCEEEEEEEEC--CSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCccEEEEEEEe--eeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 356789999998 9999999999999999877654332111 2346999999999999999999999999998
Q ss_pred EEEEEEecCCC
Q psy16902 77 TALLSVQGRRE 87 (90)
Q Consensus 77 ~~~l~v~~~~~ 87 (90)
...+.+...|.
T Consensus 92 t~~l~v~~~P~ 102 (126)
T 1he7_A 92 SIMAAFMDNPF 102 (126)
T ss_dssp EEEECCCSCTT
T ss_pred EEEEEEEcCCC
Confidence 88888876553
No 9
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.76 E-value=7.4e-17 Score=73.62 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=67.4
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEE--EEeC---CeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATT--TFKF---GFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.+..+.+.|.+. |.|.|.+.|++++..+....+... .... ....|.+.++...|.|.|.|.+.|..|......
T Consensus 15 ~~~~~~~~c~v~--G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 15 SDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCEEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ECcEEEEEEEEE--EeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 466789999998 999999999999998877654322 1111 123499999999999999999999999999999
Q ss_pred EEEEecCCCC
Q psy16902 79 LLSVQGRREG 88 (90)
Q Consensus 79 ~l~v~~~~~~ 88 (90)
.|.|.+.|.+
T Consensus 93 ~l~V~~~P~~ 102 (103)
T 1wwb_X 93 SAHFMGWPGI 102 (103)
T ss_dssp EECCSCCCCC
T ss_pred EEEECCCCCC
Confidence 9998888765
No 10
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.76 E-value=1.3e-16 Score=72.07 Aligned_cols=80 Identities=23% Similarity=0.384 Sum_probs=68.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.|.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 19 ~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 19 SSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp ESSSCEEEEEEEE--EESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEE--ecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 4688999999997 89999999999999887777776666666667999999999999999999999998888877777
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 97 ~~ 98 (99)
T 3puc_A 97 KA 98 (99)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 11
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=2.9e-16 Score=70.92 Aligned_cols=80 Identities=28% Similarity=0.380 Sum_probs=67.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....+.... .......|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 18 ~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 95 (99)
T 1g1c_A 18 GQGSDAHFRVRVV--GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLL 95 (99)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCcEEEEEEEE--EeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEE
Confidence 4688999999998 8999999999999988766555433 245556799999999999999999999999888888887
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|.+
T Consensus 96 V~~ 98 (99)
T 1g1c_A 96 VQA 98 (99)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 12
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=6.2e-17 Score=77.44 Aligned_cols=79 Identities=23% Similarity=0.277 Sum_probs=64.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC----------------------------EEc-CCCCceEEEEeCCeEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING----------------------------RPL-PASSRATTTFKFGFISLDLL 53 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~----------------------------~~~-~~~~~~~~~~~~~~~~~~~~ 53 (90)
..|+++.|.|.+. |.|.|.+.|++++ ..+ ....++..........|.|.
T Consensus 31 ~~G~~v~L~C~~~--G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~I~ 108 (139)
T 1gxe_A 31 VAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVE 108 (139)
T ss_dssp SSSSCCCCEEECC--SBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEECS
T ss_pred eCCCeEEEEEEEE--EcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEEEC
Confidence 4688999999987 9999999999988 333 23345555555555679999
Q ss_pred CCCCCCCeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 54 SIVLHDSGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 54 ~~~~~~~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
++...|.|.|.|.+.|..|.......|.|.
T Consensus 109 ~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 109 GAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp CCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999988888887764
No 13
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.74 E-value=6.9e-17 Score=71.31 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=61.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. + |.|.+.|++++..+....++..........|.|.++...|.|.|.|.+.+. .....|.|
T Consensus 9 ~~G~~v~l~C~vs--~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~l~V 81 (84)
T 2lu7_A 9 TPGGDLELVVHLS--G-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFLVSV 81 (84)
T ss_dssp CTTSCEEEECCCS--C-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEEEEE
T ss_pred ecCCCEEEEEEEC--C-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEEEEE
Confidence 4699999999874 5 888999999999998888877776666778999999999999999987553 44455666
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 82 ~e 83 (84)
T 2lu7_A 82 EE 83 (84)
T ss_dssp CC
T ss_pred EC
Confidence 44
No 14
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.72 E-value=6.4e-16 Score=71.83 Aligned_cols=84 Identities=21% Similarity=0.312 Sum_probs=69.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-CCceEEEEeC-CeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-SSRATTTFKF-GFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+++.|.|.+. +.|.|.+.|++++..+.. ..++...... ....|.|.++...|.|.|.|.+.|..|.......|
T Consensus 28 ~~G~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 105 (116)
T 2kkq_A 28 LEGDSVKLECQIS--AIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRL 105 (116)
T ss_dssp ETTEEEEEEEEBC--CBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eCCCcEEEEEEEe--ccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEE
Confidence 4688999999987 899999999999988764 3555544333 33468999999999999999999999998888899
Q ss_pred EEecCCCC
Q psy16902 81 SVQGRREG 88 (90)
Q Consensus 81 ~v~~~~~~ 88 (90)
.|..+|..
T Consensus 106 ~V~~~p~~ 113 (116)
T 2kkq_A 106 DVTARPNQ 113 (116)
T ss_dssp EEECCSCC
T ss_pred EEeCCCCC
Confidence 99877764
No 15
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=5.5e-16 Score=69.97 Aligned_cols=80 Identities=20% Similarity=0.390 Sum_probs=66.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC--CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA--SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+.. ..++..........|.+..+...|.|.|.|.+.|..|.......|
T Consensus 18 ~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 95 (100)
T 3irg_A 18 DEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNI 95 (100)
T ss_dssp ETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCcEEEEEEEE--EcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 3689999999997 899999999999988763 345555555555679999999999999999999999988877777
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.|.+
T Consensus 96 ~V~~ 99 (100)
T 3irg_A 96 HIRS 99 (100)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7653
No 16
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.72 E-value=5.9e-16 Score=70.01 Aligned_cols=81 Identities=25% Similarity=0.416 Sum_probs=65.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+++.|.|.+. +.|.|.+.|++++..+....+. ..........|.+..+...|.|.|.|.+.|..|.......|.
T Consensus 18 ~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (100)
T 2kdg_A 18 DEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLD 95 (100)
T ss_dssp ETTCCEEEEEECE--EESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCEEEEEEEEE--eeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEE
Confidence 4688999999987 8999999999999887765432 222334445799999999999999999999999988888888
Q ss_pred EecC
Q psy16902 82 VQGR 85 (90)
Q Consensus 82 v~~~ 85 (90)
|.+.
T Consensus 96 V~~~ 99 (100)
T 2kdg_A 96 VLAK 99 (100)
T ss_dssp EECC
T ss_pred EEec
Confidence 8754
No 17
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.72 E-value=3.9e-16 Score=70.49 Aligned_cols=80 Identities=26% Similarity=0.482 Sum_probs=65.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCc-eEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSR-ATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+..... +..........|.+..+...|.|.|.|.+.|..|.......|.
T Consensus 18 ~~G~~v~l~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~ 95 (99)
T 1u2h_A 18 REGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLE 95 (99)
T ss_dssp ETTCCEEEEEEEE--EESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEE
Confidence 4688999999997 899999999999998765533 3333344445799999999999999999999999888888887
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|.+
T Consensus 96 V~~ 98 (99)
T 1u2h_A 96 VRG 98 (99)
T ss_dssp EEC
T ss_pred EEC
Confidence 754
No 18
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.72 E-value=3e-16 Score=70.24 Aligned_cols=76 Identities=22% Similarity=0.264 Sum_probs=62.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. |.|.|.+.|++++ ..+..... .........|.+..+...|.|.|.|.+.|..|.......|
T Consensus 15 ~~G~~~~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 90 (93)
T 1wit_A 15 KAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELL--VDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEV 90 (93)
T ss_dssp CTTBCCEEEEEEE--CCSSCEEEEECSTTTCBCSTTSE--EEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eCCCEEEEEEEEE--EcCCCEEEEEECCCCcccCCcEE--EEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEE
Confidence 4688999999998 9999999999999 77655432 2233445679999999999999999999999988777777
Q ss_pred EE
Q psy16902 81 SV 82 (90)
Q Consensus 81 ~v 82 (90)
.|
T Consensus 91 ~V 92 (93)
T 1wit_A 91 IV 92 (93)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 19
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.71 E-value=9e-16 Score=74.39 Aligned_cols=84 Identities=26% Similarity=0.421 Sum_probs=68.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEe-CCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFK-FGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..... .....|.|.++...|.|.|.|.+.|..|.......|.
T Consensus 54 ~~G~~v~L~C~~~--g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 131 (154)
T 1fhg_A 54 VEGSAARFDCKVE--GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELL 131 (154)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eCCCeEEEEEEEE--EecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEE
Confidence 4688999999998 899999999999998877666655432 2345799999999999999999999999988888888
Q ss_pred EecCCCC
Q psy16902 82 VQGRREG 88 (90)
Q Consensus 82 v~~~~~~ 88 (90)
|..+|.+
T Consensus 132 V~~~p~~ 138 (154)
T 1fhg_A 132 VETMGKE 138 (154)
T ss_dssp EECC---
T ss_pred EeCcCcC
Confidence 8876654
No 20
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=4.2e-16 Score=71.66 Aligned_cols=83 Identities=28% Similarity=0.454 Sum_probs=67.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-CCceEEEEe-CCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-SSRATTTFK-FGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.|.|.+.|++++..+.. ..++..... .....|.+..+...|.|.|.|.+.|..|.......|
T Consensus 21 ~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 98 (110)
T 2dm2_A 21 FEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRL 98 (110)
T ss_dssp ETTCCEEEEEEBC--CSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCE
T ss_pred eCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 4688999999987 899999999999988765 345544433 334469999999999999999999999998888888
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.|...+.
T Consensus 99 ~V~~~~~ 105 (110)
T 2dm2_A 99 MVQAVNS 105 (110)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 8876553
No 21
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.5e-16 Score=71.07 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=65.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+ .|.|.+.|++++..+....++.+........|.|.++...|.|.|.|.+.|. .......|.|
T Consensus 20 ~~G~~v~l~C~v----~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V 93 (100)
T 2yuz_A 20 NLGKEICLKCEI----SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHV 93 (100)
T ss_dssp ETTSCCCEEEEC----SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEE
T ss_pred cCCCCEEEEEEe----CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEE
Confidence 468899999975 6778899999999998877877766666678999999999999999999997 4556677888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 94 ~~~P~ 98 (100)
T 2yuz_A 94 ISGPS 98 (100)
T ss_dssp ECCSC
T ss_pred eCCCC
Confidence 77765
No 22
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.70 E-value=9.6e-17 Score=73.56 Aligned_cols=79 Identities=27% Similarity=0.442 Sum_probs=66.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.|.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 27 ~~G~~v~L~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 27 YEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp SSSSCEECCEEEE--CSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEE
T ss_pred eCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEE
Confidence 4689999999998 99999999999998877766766655555567999999999999999999999998777777766
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 105 ~ 105 (106)
T 1nct_A 105 Q 105 (106)
T ss_dssp C
T ss_pred E
Confidence 3
No 23
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.69 E-value=3.3e-15 Score=67.03 Aligned_cols=75 Identities=27% Similarity=0.319 Sum_probs=60.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. + +.+.+.|++++..+....++.+........|.|.++...|.|.|.|.+.|. .....|.|
T Consensus 18 ~~G~~v~l~C~v~--~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa~L~V 90 (93)
T 1waa_A 18 FVGETAHFEIELS--E-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----KSAANLKV 90 (93)
T ss_dssp ETTSCEEEEEEES--S-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----EEEEEEEE
T ss_pred eCCCCEEEEEEEC--C-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----cEEEEEEE
Confidence 4689999999985 5 457899999999998777777776666678999999999999999998774 34455665
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 91 ~~ 92 (93)
T 1waa_A 91 KE 92 (93)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 24
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1e-15 Score=69.25 Aligned_cols=79 Identities=25% Similarity=0.436 Sum_probs=63.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+++.|.|.+. +.|.|.+.|++++..+.. ..++...... .|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 21 ~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 95 (100)
T 2edj_A 21 AVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVATSSSGETSWSAVLD 95 (100)
T ss_dssp ESSSEEEECCEEE--CSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEEECSSCCCBCCEEEE
T ss_pred cCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEEEcCCCCEEEEEEEE
Confidence 4688999999998 999999999999887763 3333332222 489999999999999999999999888888888
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
|.+++
T Consensus 96 V~~~~ 100 (100)
T 2edj_A 96 VTESG 100 (100)
T ss_dssp EESCC
T ss_pred EecCC
Confidence 87654
No 25
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.68 E-value=3.3e-16 Score=70.08 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=56.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+.+.|.|.+. + |.|.+.|++++..+....++..........|.|.++...|.|.|.|.+.|.
T Consensus 19 ~~g~~v~l~C~v~--~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 19 ITSECVMLACEVD--R-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp CTTCCEEEEEECS--C-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred ECCCcEEEEEEEC--C-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 3689999999874 4 888999999999988887777777777778999999999999999998664
No 26
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.68 E-value=4.5e-16 Score=71.26 Aligned_cols=81 Identities=22% Similarity=0.372 Sum_probs=57.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.|.|.+.|++++..+....+..... ....|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 23 ~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 23 SIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp ETTCCEEEECBCC------CCEEEEESSSBCCCBTTEEEET--TTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEE
T ss_pred eCCCeEEEEEECc--CcCCCeEEEEECCeEcccCCCeEEeC--CCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEE
Confidence 3689999999887 88999999999998776655544332 2235899999999999999999999999999999988
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+++.
T Consensus 99 ~~~~~ 103 (108)
T 3kvq_A 99 EGAQE 103 (108)
T ss_dssp EC---
T ss_pred eCCCc
Confidence 87654
No 27
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=6.9e-15 Score=68.39 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=63.5
Q ss_pred ceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeC----CeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 6 RKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKF----GFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 6 ~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
+...|.|.+. |.|.|.+.|++++..+....+....... ....|.+.++...|.|.|.|.+.|..|.......+.
T Consensus 21 ~~~~l~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 98 (118)
T 1wwc_A 21 LEHCIEFVVR--GNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGH 98 (118)
T ss_dssp CEEEEEEEEE--CSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred cceEEEEEee--eeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEE
Confidence 4568889998 9999999999999988776544333211 234689999999999999999999999988888877
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
+...|.
T Consensus 99 v~~~P~ 104 (118)
T 1wwc_A 99 FLKEPF 104 (118)
T ss_dssp CSCCCC
T ss_pred EccCCC
Confidence 765553
No 28
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.66 E-value=1e-14 Score=66.04 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=64.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. .|.+.+.|++++..+....++..........|.|.++...|.|.|.|.+ +.......|.|
T Consensus 21 ~~G~~v~l~C~~~---~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V 93 (100)
T 2yuv_A 21 DKGGRVRFVVELA---DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFV 93 (100)
T ss_dssp CTTEEEEEEEEES---CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEE
T ss_pred cCCCcEEEEEEec---CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEE
Confidence 3689999999984 5889999999998887777777666666667999999999999999998 56677778888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 94 ~~~P~ 98 (100)
T 2yuv_A 94 RSGPS 98 (100)
T ss_dssp CCSCC
T ss_pred ecCCC
Confidence 87764
No 29
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=6.7e-15 Score=66.95 Aligned_cols=78 Identities=23% Similarity=0.288 Sum_probs=62.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+++.|.|.+. + +.+.+.|++++..+.... ++..........|.|.++...|.|.|.|.+.| ......|
T Consensus 20 ~~G~~v~l~C~~~--~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l 92 (103)
T 1x44_A 20 YCGERVELECEVS--E-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKL 92 (103)
T ss_dssp ETTEEEEEEEECS--S-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEEEE
T ss_pred ECCCCEEEEEEec--C-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEEEE
Confidence 4688999999985 6 679999999999887666 55666666667899999999999999999877 4556677
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.|.+.|.
T Consensus 93 ~V~~~p~ 99 (103)
T 1x44_A 93 SVDLKSG 99 (103)
T ss_dssp EEECCCS
T ss_pred EEeCCCC
Confidence 7776543
No 30
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=5.8e-16 Score=71.13 Aligned_cols=83 Identities=22% Similarity=0.392 Sum_probs=67.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+......... .......|.|.++...|.|.|.|.+.|..|.......|.
T Consensus 22 ~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 99 (110)
T 2dm3_A 22 QEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELV 99 (110)
T ss_dssp ESSSCBCCEEEEE--CSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEE
T ss_pred eCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEE
Confidence 4688999999998 9999999999999877655443332 223345799999999999999999999999888888888
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|.+++.
T Consensus 100 V~~~p~ 105 (110)
T 2dm3_A 100 VAAKES 105 (110)
T ss_dssp EECCCC
T ss_pred EeCCCC
Confidence 886654
No 31
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.66 E-value=2.9e-15 Score=69.92 Aligned_cols=86 Identities=10% Similarity=0.126 Sum_probs=62.8
Q ss_pred CCCceEEEEEEEccCC--CCCcEEEEeeCCEEcC-----CCCceEEEEe---CCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVG--DPSMRVDWFINGRPLP-----ASSRATTTFK---FGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~--~~~~~~~w~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
..|+++.|.|.+. + .+.+.+.|++++..+. .......... .....|.|.++...|.|.|.|.+.|..|
T Consensus 21 ~~G~~v~L~C~~~--g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 98 (122)
T 3s35_X 21 SVGEKLVLNCTAR--TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 98 (122)
T ss_dssp EETCCEEEEEEEE--ECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred ecCCeEEEEEEEE--cCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCC
Confidence 3589999999997 6 4557899999876332 1111111110 1234699999999999999999999999
Q ss_pred ceEeEEEEEEecCCCCCC
Q psy16902 73 SAESTALLSVQGRREGEV 90 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~~~~ 90 (90)
.......|.|.++|.|.+
T Consensus 99 ~~~~~~~l~V~~~p~i~~ 116 (122)
T 3s35_X 99 TKKNSTFVRVHEKPFVAF 116 (122)
T ss_dssp EEEEEEEEEEEEEECC--
T ss_pred ceEEEEEEEEeccCeEEe
Confidence 999889999998887753
No 32
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-14 Score=66.96 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
.|+++.|.|.+ ..|.+.+.|++++..+....++..........|.|.++...|.|.|.|.+.| ......|.|.
T Consensus 27 ~G~~v~L~C~~---~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~ 99 (113)
T 2cpc_A 27 RLERVVLTCEL---CRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVT 99 (113)
T ss_dssp TTCCEEEEEEE---SCTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEEEE
T ss_pred cCCeEEEEEEe---cCCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEEEe
Confidence 58899999987 4678899999999988777676666555556899999999999999999888 4456677777
Q ss_pred cCCCC
Q psy16902 84 GRREG 88 (90)
Q Consensus 84 ~~~~~ 88 (90)
++|.+
T Consensus 100 ~~p~~ 104 (113)
T 2cpc_A 100 EPPVR 104 (113)
T ss_dssp CCCCC
T ss_pred cCCch
Confidence 76654
No 33
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2e-15 Score=70.18 Aligned_cols=80 Identities=23% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+++.|.|.+. +.|.+.+.|++++..+.. ..++...... .|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 21 ~~G~~v~l~C~~~--g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (118)
T 2eo9_A 21 AVDGTFVLSCVAT--GSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIE 95 (118)
T ss_dssp ETTCEEEEECBCC--CSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEECSSCEEEEECCEE
T ss_pred cCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEE
Confidence 4689999999987 899999999999987754 3444433322 589999999999999999999999888888888
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|.+.+.
T Consensus 96 V~~~~~ 101 (118)
T 2eo9_A 96 VQEFGV 101 (118)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 876543
No 34
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=4.2e-15 Score=67.68 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=63.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.+.+ +.|++++..+....++..........|.|.++...|.|.|.|.+.|..+ ...|.|
T Consensus 23 ~~G~~v~l~C~~~--~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~----~~~l~V 95 (104)
T 2e6p_A 23 TTSERVVLTCELS--RVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA----FFGVTV 95 (104)
T ss_dssp ESSSCEECCEECS--STTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC----CEEEEE
T ss_pred eCCCcEEEEEEec--CCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE----EEEEEE
Confidence 4689999999987 88888 9999999988777676666666667899999999999999999988643 455666
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 96 ~~~P~ 100 (104)
T 2e6p_A 96 QDPSG 100 (104)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 66554
No 35
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.65 E-value=2.6e-14 Score=71.77 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=68.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEe-CCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFK-FGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..... .....|.+..+...|.|.|.|.+.|..|.......|.
T Consensus 130 ~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 207 (212)
T 2r15_A 130 QEGKALNLTCNVW--GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 207 (212)
T ss_dssp ETTCCEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCeEEEEEEEc--CCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEE
Confidence 3588999999998 999999999999999887766655543 4456799999999999999999999999988888888
Q ss_pred EecC
Q psy16902 82 VQGR 85 (90)
Q Consensus 82 v~~~ 85 (90)
|..+
T Consensus 208 V~~P 211 (212)
T 2r15_A 208 VFIP 211 (212)
T ss_dssp EECC
T ss_pred EEcc
Confidence 7654
No 36
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=3.5e-15 Score=67.86 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=63.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. + +.+.+.|++++..+....++..........|.|.++...|.|.|.|.+.| ......|.|
T Consensus 21 ~~G~~v~l~C~~~--~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V 93 (103)
T 2edf_A 21 APGEDVELRCELS--R-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SKSTASLHV 93 (103)
T ss_dssp CTTSCEEECCEES--S-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS----CEEEEEEEE
T ss_pred cCCCCEEEEEEEe--C-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc----CCcEEEEEE
Confidence 4689999999986 5 77889999999988777777766666667799999999999999999988 355567777
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 94 ~~~p~ 98 (103)
T 2edf_A 94 EEKAS 98 (103)
T ss_dssp CCCSS
T ss_pred eCCCC
Confidence 66554
No 37
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=3.2e-15 Score=67.64 Aligned_cols=77 Identities=22% Similarity=0.330 Sum_probs=62.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.| |.+.|++++..+....++... . ..|.|..+...|.|.|.|.+.|..|.......+.|
T Consensus 16 ~~G~~v~L~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 88 (99)
T 2cr3_A 16 HPGDLLQLRCRLR--DDV-QSINWLRDGVQLAESNRTRIT--G--EEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNV 88 (99)
T ss_dssp CTTSCEEEECCCC--SSC-CEEEEEESSSBCCCCSSEEEC--S--SEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECB
T ss_pred eCCCcEEEEEEec--CCC-CeEEEEECCEECCCCCcEEEE--C--CEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEE
Confidence 5689999999886 766 799999999877665555443 2 25899999999999999999999988877777777
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.+.+
T Consensus 89 ~~~~ 92 (99)
T 2cr3_A 89 SDAL 92 (99)
T ss_dssp CSCC
T ss_pred ecCC
Confidence 6554
No 38
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.65 E-value=2.4e-14 Score=72.34 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=69.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC--CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS--SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+... .++..........|.+.++...|.|.|.|.+.|..|.......+
T Consensus 31 ~~G~~v~l~C~~~--g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 108 (215)
T 3mtr_A 31 WEGNQVNITCEVF--AYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFIL 108 (215)
T ss_dssp CTTCCEEEEEEEE--EESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ECCCCEEEEEEEe--ecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEE
Confidence 4689999999998 9999999999999988765 34555444556679999999999999999999999988888888
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.+...|.
T Consensus 109 ~v~~~P~ 115 (215)
T 3mtr_A 109 VQADTPS 115 (215)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 8776554
No 39
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.64 E-value=5e-14 Score=65.00 Aligned_cols=78 Identities=19% Similarity=0.337 Sum_probs=64.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +. |.+.|++++..+....++..........|.|.++...|.|.|.|.+ +.......|.|
T Consensus 32 ~~G~~v~l~C~~~--~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V 103 (113)
T 2edh_A 32 TEGATAVLRCELS--KM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTV 103 (113)
T ss_dssp CTTSCEEEEEEES--SC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEE
T ss_pred eCCCeEEEEEEEC--CC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEE
Confidence 4689999999986 54 7899999999887777777766666677999999999999999998 56677778888
Q ss_pred ecCCCC
Q psy16902 83 QGRREG 88 (90)
Q Consensus 83 ~~~~~~ 88 (90)
.++|..
T Consensus 104 ~~~p~~ 109 (113)
T 2edh_A 104 RAMPSG 109 (113)
T ss_dssp CCCCCS
T ss_pred eCCCCC
Confidence 776653
No 40
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.64 E-value=4.5e-15 Score=66.66 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=59.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. +.| |.+.|++++..+....++... . ..|.+.++...|.|.|.|.+.|..|.......+.|
T Consensus 22 ~~G~~v~l~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 22 HPGDLLQLRCRLR--DDV-QSINWLRDGVQLVESNRTRIT--G--EEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp CTTSCEEEECCEE--SSC-CEEEEEBTTBCCCCCSSEEEC--S--SEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEECC--CCC-CceEEEECCEecCCCCCEEEe--C--CEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 4689999999987 777 799999999887766655443 2 25899999999999999999999888777766655
No 41
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=4.5e-15 Score=67.00 Aligned_cols=75 Identities=23% Similarity=0.500 Sum_probs=60.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+...... .......|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 24 ~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 24 IEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp CTTCCEEEECEEE--EESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEE
T ss_pred eCCCeEEEEEEEe--eeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 4689999999997 8999999999999877654322 1234457999999999999999999999988776666654
No 42
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=1.7e-15 Score=71.21 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=60.2
Q ss_pred CCCceEEEEEEEccCCC---CCcEEEEeeCCEEc-C--CCCceEEEE--eC----CeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGD---PSMRVDWFINGRPL-P--ASSRATTTF--KF----GFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~---~~~~~~w~~~~~~~-~--~~~~~~~~~--~~----~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|+++.|.|.+. +. |.|.+.|+++.... . ...++.+.. .. ....|.|.++...|.|.|.|.+.|.
T Consensus 20 ~eG~~v~L~C~v~--g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~ 97 (126)
T 2dav_A 20 KVGEDITFIAKVK--AEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYK 97 (126)
T ss_dssp ETTCCEEEEEEEE--CCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECS
T ss_pred eCCCCEEEEEEEe--ccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeC
Confidence 5799999999987 53 89999999974211 0 122333321 10 1357999999999999999999999
Q ss_pred CcceEeEEEEEEec
Q psy16902 71 SGSAESTALLSVQG 84 (90)
Q Consensus 71 ~~~~~~~~~l~v~~ 84 (90)
.+...+...|.|.+
T Consensus 98 ~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 98 DKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEECCEEEEEC
T ss_pred CCcEEEEEEEEEEe
Confidence 99988888999987
No 43
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=8.7e-15 Score=66.84 Aligned_cols=79 Identities=23% Similarity=0.236 Sum_probs=63.7
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. +.+. +.+.|++++..+....++..........|.|.++...|.|.|.|.+.+ ......|.
T Consensus 21 ~~G~~v~l~C~v~--~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a~L~ 94 (104)
T 2eny_A 21 LEGESCSFECVLS--HESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG----LTSKASLI 94 (104)
T ss_dssp ESSCCEEEEEECS--SCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT----EEEEECEE
T ss_pred cCCCcEEEEEEEc--CCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC----eeEEEEEE
Confidence 4689999999986 7664 479999999988777777776666667899999999999999998744 45667788
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|.++|.
T Consensus 95 V~~~p~ 100 (104)
T 2eny_A 95 VRERSG 100 (104)
T ss_dssp EECCCS
T ss_pred EeCCCc
Confidence 877664
No 44
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.62 E-value=4.3e-14 Score=63.44 Aligned_cols=74 Identities=23% Similarity=0.262 Sum_probs=59.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+ +.|.+.+.|++++..+....++..........|.|.++...|.|.|.|.+ +.......|.|
T Consensus 21 ~~G~~v~l~C~~---~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V 93 (95)
T 2k1m_A 21 AAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKV 93 (95)
T ss_dssp ETTSCEEEEEEC---SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEE
T ss_pred eCCCcEEEEEEe---CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEE
Confidence 468999999986 67888999999998887766776666666678999999999999999998 44555556655
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 94 ~ 94 (95)
T 2k1m_A 94 I 94 (95)
T ss_dssp E
T ss_pred e
Confidence 4
No 45
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.62 E-value=1.8e-14 Score=64.62 Aligned_cols=76 Identities=14% Similarity=0.237 Sum_probs=61.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. + .|.+.|++++..+....++... .. .|.+.++...|.|.|.|.+.|..|.......+.|
T Consensus 14 ~~G~~~~l~C~~~--~--~p~v~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 85 (95)
T 4hwu_A 14 APGESLELQCMLK--D--AAVISWTKDGVHLGPNNRTVLI--GE--YLQIKGATPRDSGLYACTAARTVDSETWIFMVNV 85 (95)
T ss_dssp CTTSCEEEECCCC--T--TCEEEEEETTEEECCCSSEEEE--TT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCCEEEEEEEeC--C--CCEEEEEECCEECCCCceEEEe--CC--EEEECcCCcccCEEEEEEEccCCCcEEEEEEEEE
Confidence 4689999999765 4 5899999999988776655443 22 5899999999999999999999998888888888
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.+++
T Consensus 86 ~~~~ 89 (95)
T 4hwu_A 86 TDAA 89 (95)
T ss_dssp CCC-
T ss_pred eCCc
Confidence 7654
No 46
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.61 E-value=1.2e-14 Score=73.44 Aligned_cols=76 Identities=17% Similarity=0.350 Sum_probs=61.4
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. +. |.|.+.|++++..+....++. ...+...|.|.++...|.|.|.|.+.|..|...+...|.
T Consensus 129 ~~g~~v~l~C~v~--g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 129 TGECNVLLKCKVA--NIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp ETTTEEEEEEEEE--SCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred cCCCcEEEEEEEe--CCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEe
Confidence 3588999999998 88 899999999999886654432 122334699999999999999999999999888777665
Q ss_pred E
Q psy16902 82 V 82 (90)
Q Consensus 82 v 82 (90)
.
T Consensus 205 ~ 205 (207)
T 3rbs_A 205 D 205 (207)
T ss_dssp C
T ss_pred c
Confidence 3
No 47
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.61 E-value=3.1e-14 Score=80.57 Aligned_cols=83 Identities=20% Similarity=0.430 Sum_probs=72.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. |.|.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|...+...|.+
T Consensus 397 ~~G~~v~l~C~~~--g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v 474 (570)
T 3b43_A 397 LKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITL 474 (570)
T ss_dssp CTTCCEEEEEEEE--SSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCCCEEEEEEEEe--cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEe
Confidence 4688999999998 99999999999999988777776665666667999999999999999999999999888888888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
..+|.
T Consensus 475 ~~~P~ 479 (570)
T 3b43_A 475 KAPPR 479 (570)
T ss_dssp CCCCE
T ss_pred ccCCc
Confidence 77665
No 48
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.61 E-value=2.2e-14 Score=65.21 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=63.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.|.+ +.|++++..+....++..........|.|.++...|.|.|.|. .+.......|.|
T Consensus 21 ~~G~~v~l~C~~~--~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V 93 (103)
T 2e7b_A 21 LEGGAATLRCVLS--SVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTV 93 (103)
T ss_dssp ESSSCEEEEEECS--SCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEE
T ss_pred ECCCcEEEEEEEe--CCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEE
Confidence 4689999999987 88888 9999999888766777776666667799999999999999998 445555667777
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 94 ~~~p~ 98 (103)
T 2e7b_A 94 TALPS 98 (103)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 76664
No 49
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=6.3e-14 Score=63.64 Aligned_cols=78 Identities=29% Similarity=0.350 Sum_probs=63.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|. . +.|.+.+.|++++..+....++..........|.|.++...|.|.|.|. .+.......|.|
T Consensus 21 ~~G~~v~l~C~-~--~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V 93 (103)
T 2dku_A 21 EEKGTAVFTCK-T--EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLV 93 (103)
T ss_dssp ETTSEEEEEEE-C--SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEE
T ss_pred eCCCcEEEEEE-e--CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEE
Confidence 46899999998 4 8888999999999988777777666566666799999999999999998 455666677777
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.|.
T Consensus 94 ~~~p~ 98 (103)
T 2dku_A 94 QGRRS 98 (103)
T ss_dssp ECSCC
T ss_pred eCccC
Confidence 76543
No 50
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.61 E-value=6.5e-14 Score=73.04 Aligned_cols=79 Identities=22% Similarity=0.447 Sum_probs=68.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..........|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 205 ~~g~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 205 LKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp CTTCCEEEEEECB--SSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEE
Confidence 3588999999987 89999999999999888777766665666667999999999999999999999999888888776
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 283 ~ 283 (284)
T 2rik_A 283 K 283 (284)
T ss_dssp C
T ss_pred c
Confidence 4
No 51
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.61 E-value=3.7e-14 Score=70.35 Aligned_cols=78 Identities=29% Similarity=0.389 Sum_probs=66.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..........+.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 116 ~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 116 RQGSQVRLQVRVT--GIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp CTTEEEEEEEEEE--EESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEE--EecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 4588999999997 88999999999999988777766666666667899999999999999999999998887777765
No 52
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.60 E-value=2.5e-15 Score=67.92 Aligned_cols=76 Identities=30% Similarity=0.461 Sum_probs=59.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCc---eEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSR---ATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....+ .... .....|.+..+...|.|.|.|.+.|..|.......
T Consensus 21 ~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 96 (100)
T 3caf_A 21 PAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVR--NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH 96 (100)
T ss_dssp CTTCCEEEECCEE--EESCCEEEEEETTEECCGGGSTTCCEEE--GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cCCCEEEEEEEcc--ccCCCEEEEEECCEEcccccccccEEEe--cCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEE
Confidence 3689999999987 899999999999988765432 1221 12235899999999999999999999998777776
Q ss_pred EEE
Q psy16902 80 LSV 82 (90)
Q Consensus 80 l~v 82 (90)
|.|
T Consensus 97 l~V 99 (100)
T 3caf_A 97 LDV 99 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 53
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=9.7e-15 Score=66.73 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=56.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+++.|.|.+. +.+.+ +.|++++..+....++..........|.|.++...|.|.|.|.+.|.
T Consensus 21 ~~G~~v~l~C~~~--~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 21 KAAEQAVFKCEVS--DEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp ESSCCEECCCEES--CSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred eCCCeEEEEEEEc--CCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 4689999999997 77777 99999999887777776666666667999999999999999999997
No 54
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.60 E-value=2.7e-14 Score=71.08 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=66.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcC-CCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLS-IVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..........+.+.. +...|.|.|.|.+.|..|.......|.
T Consensus 117 ~~g~~~~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 194 (197)
T 2j8h_A 117 LRGEVVSIKIPFS--GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194 (197)
T ss_dssp ETTCCCEEEEEEE--EESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eCCCEEEEEEEEE--ecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEE
Confidence 3588899999998 8899999999999888776666655555566789999 999999999999999999888877777
Q ss_pred Ee
Q psy16902 82 VQ 83 (90)
Q Consensus 82 v~ 83 (90)
|.
T Consensus 195 V~ 196 (197)
T 2j8h_A 195 VA 196 (197)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 55
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.60 E-value=6.6e-14 Score=73.88 Aligned_cols=81 Identities=23% Similarity=0.370 Sum_probs=68.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEe-CCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFK-FGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..... .....|.+..+...|.|.|.|.+.|..|.......|.
T Consensus 235 ~~g~~~~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 312 (317)
T 2y25_A 235 QEGKALNLTCNVW--GDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 312 (317)
T ss_dssp ETTSBBCEEEEEE--CSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCEEEEEEEEe--cCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEE
Confidence 3588899999998 999999999999988877766655543 4456799999999999999999999999988888888
Q ss_pred EecC
Q psy16902 82 VQGR 85 (90)
Q Consensus 82 v~~~ 85 (90)
|..+
T Consensus 313 V~~P 316 (317)
T 2y25_A 313 VFIP 316 (317)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8654
No 56
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.60 E-value=8.5e-14 Score=65.26 Aligned_cols=83 Identities=11% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEc--------CCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPL--------PASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+++.|.|.+. +.|.+.+.|++.+..+ ....++... .......|.|.++...|.|.|.|.+.+. +.
T Consensus 14 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~ 90 (124)
T 3rbg_A 14 EEGQTLTLKCVTS--LRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SV 90 (124)
T ss_dssp ETTSCEEEEEECC--CCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SE
T ss_pred cCCCCEEEEeEEe--ccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CC
Confidence 4699999999987 8889999999755321 123344332 2333457999999999999999999999 88
Q ss_pred eEeEEEEEEecCCCC
Q psy16902 74 AESTALLSVQGRREG 88 (90)
Q Consensus 74 ~~~~~~l~v~~~~~~ 88 (90)
......|.|..+|..
T Consensus 91 ~~~~~~l~V~~~P~~ 105 (124)
T 3rbg_A 91 STKEVKVIVLATMKG 105 (124)
T ss_dssp EEEEEEEEEECC---
T ss_pred CcEEEEEEEEeCCCC
Confidence 888888998877753
No 57
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.60 E-value=7.4e-14 Score=69.31 Aligned_cols=82 Identities=22% Similarity=0.320 Sum_probs=68.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+....++..........|.+..+...|.|.|.|.+.+..+.......+.+
T Consensus 20 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v 97 (197)
T 3lcy_A 20 KLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLL 97 (197)
T ss_dssp ETTSEEEEEEEEE--EESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eCCCcEEEEEEEe--cCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEE
Confidence 4689999999987 88889999999999887777776666666667999999999999999999998887777777776
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
...|
T Consensus 98 ~~~p 101 (197)
T 3lcy_A 98 QATP 101 (197)
T ss_dssp EEEE
T ss_pred EcCC
Confidence 5443
No 58
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=3.4e-15 Score=69.20 Aligned_cols=80 Identities=25% Similarity=0.377 Sum_probs=62.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+....++... .......|.|.++...|.|.|.|. .|.......|.
T Consensus 26 ~~G~~v~l~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~L~ 99 (115)
T 2cr6_A 26 QEGSSATFRCRIS--PANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE----AGDQRASAALR 99 (115)
T ss_dssp ETTSCEECCCEEE--STTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE----ETTEECCEEEE
T ss_pred eCCCcEEEEEEEc--CCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE----ECCeeEEEEEE
Confidence 4689999999998 8999999999999888766554433 223344689999999999999998 35566677888
Q ss_pred EecCCCC
Q psy16902 82 VQGRREG 88 (90)
Q Consensus 82 v~~~~~~ 88 (90)
|.++|.+
T Consensus 100 V~~~p~~ 106 (115)
T 2cr6_A 100 VTEKPSV 106 (115)
T ss_dssp EECCSSC
T ss_pred EECCCce
Confidence 8877764
No 59
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.59 E-value=1e-13 Score=63.51 Aligned_cols=79 Identities=19% Similarity=0.192 Sum_probs=58.7
Q ss_pred CCCceEEEEEEEccCCCCC---cEEEEeeCCEEcCC---CCceEEEE--e----CCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPS---MRVDWFINGRPLPA---SSRATTTF--K----FGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~~~~---~~~~~~~~--~----~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+++.|.|.+. +.|. |.+.|++++..... ..++.... . .....|.|.++...|.|.|.|.+.|.
T Consensus 17 ~~G~~v~L~C~~~--g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 94 (108)
T 3cx2_A 17 TVGGSITFSARVA--GASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTK 94 (108)
T ss_dssp ETTCCEEEEEEEE--CC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eCCCCEEEEEEEC--CCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecC
Confidence 4689999999998 8888 99999998622111 12332221 0 01346999999999999999999999
Q ss_pred CcceEeEEEEEEe
Q psy16902 71 SGSAESTALLSVQ 83 (90)
Q Consensus 71 ~~~~~~~~~l~v~ 83 (90)
.|...+...|.|.
T Consensus 95 ~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 95 DKFDCSNFNLTVH 107 (108)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCceEEEEEEEEe
Confidence 9998888888775
No 60
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.3e-15 Score=68.31 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC----ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS----RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.+|+.+.|.|.+. +.| +.+.|++++..+.... ++..........|.|.++...|.|.|.|.+.| .....
T Consensus 21 ~~G~~v~l~C~~~--~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~ 93 (101)
T 2edk_A 21 FVGDRVEMAVEVS--EEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG----GQCEA 93 (101)
T ss_dssp ESSCCCBCCEEES--CSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS----CEECC
T ss_pred cCCCCEEEEEEEe--CCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC----CcEEE
Confidence 4688999999987 777 9999999998876654 55666566666799999999999999999876 23344
Q ss_pred EEEEecCC
Q psy16902 79 LLSVQGRR 86 (90)
Q Consensus 79 ~l~v~~~~ 86 (90)
.|.|.++|
T Consensus 94 ~l~V~~~P 101 (101)
T 2edk_A 94 ELIVEEKQ 101 (101)
T ss_dssp BEEEECCC
T ss_pred EEEEeCCC
Confidence 56665543
No 61
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.59 E-value=1.2e-13 Score=63.02 Aligned_cols=81 Identities=19% Similarity=0.290 Sum_probs=61.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-Ec-------CCCCceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-PL-------PASSRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+++.|.|.+. +.+.+.+.|++++. .+ ....++.... ......|.|.++...|.|.|.|.+.+ .+.
T Consensus 19 ~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~ 95 (108)
T 3m45_A 19 VEGGTAILTCRVD--QNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPV 95 (108)
T ss_dssp ETTSCEEEEEEES--SCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSC
T ss_pred EeCCcEEEEeEEc--CCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCC
Confidence 4689999999997 88889999998764 11 1223444332 22355799999999999999999999 788
Q ss_pred eEeEEEEEEecCC
Q psy16902 74 AESTALLSVQGRR 86 (90)
Q Consensus 74 ~~~~~~l~v~~~~ 86 (90)
......|.|.++|
T Consensus 96 ~~~~~~L~V~~~P 108 (108)
T 3m45_A 96 KTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEEEEEECCC
T ss_pred cEEEEEEEEEcCC
Confidence 8888888887765
No 62
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.58 E-value=4.4e-13 Score=69.91 Aligned_cols=84 Identities=27% Similarity=0.489 Sum_probs=71.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+....+...........|.+..+...|.|.|.|.+.|..|.......+.|
T Consensus 112 ~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 189 (284)
T 2rik_A 112 KQDEHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV 189 (284)
T ss_dssp ETTCCEEEEEEEE--SSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCCceEEEEEEEe--eeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEE
Confidence 4688999999998 88999999999999887766665555555667999999999999999999999998888888888
Q ss_pred ecCCCC
Q psy16902 83 QGRREG 88 (90)
Q Consensus 83 ~~~~~~ 88 (90)
..+|.+
T Consensus 190 ~~~p~~ 195 (284)
T 2rik_A 190 KEPPVF 195 (284)
T ss_dssp ECCCBC
T ss_pred ecCCcc
Confidence 877654
No 63
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.1e-13 Score=63.23 Aligned_cols=73 Identities=22% Similarity=0.292 Sum_probs=57.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC-CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS-SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+++.|.|.+ +.|.+.+.|++++..+... .++..........|.|.++...|.|.|.|.+.+ ......|.
T Consensus 29 ~~G~~v~L~C~~---~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~~~l~ 101 (104)
T 1pd6_A 29 SKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG----EKCSTELF 101 (104)
T ss_dssp ETTSCEEEEEEC---SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT----EEECCEEE
T ss_pred ecCCCEEEEEEE---cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEE
Confidence 468999999986 5788889999999988776 666666566666899999999999999999833 33344444
Q ss_pred E
Q psy16902 82 V 82 (90)
Q Consensus 82 v 82 (90)
|
T Consensus 102 V 102 (104)
T 1pd6_A 102 V 102 (104)
T ss_dssp E
T ss_pred E
Confidence 4
No 64
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=2.4e-13 Score=62.86 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=62.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC----------ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS----------RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+.+.|.|.+. + .|.+.|++|+..+.... ++.....+....|.|.++...|.|.|.|+.-+
T Consensus 21 ~eG~~a~f~C~vs--~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~--- 93 (112)
T 2e6q_A 21 YDGEDAVFSLDLS--T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCP--- 93 (112)
T ss_dssp ETTCEEEEEEEES--S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEET---
T ss_pred cCCCcEEEEEEEC--C--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEEC---
Confidence 4699999999996 5 77899999999988765 66666556667899999999999999886554
Q ss_pred ceEeEEEEEEecCCC
Q psy16902 73 SAESTALLSVQGRRE 87 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~ 87 (90)
....+..|.|.++|.
T Consensus 94 ~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 94 GVQDSAALTIQESSG 108 (112)
T ss_dssp TEEEEEEEEEECSSC
T ss_pred CeeEEEEEEEeCCCc
Confidence 345677888887764
No 65
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.57 E-value=1.9e-13 Score=73.95 Aligned_cols=83 Identities=19% Similarity=0.354 Sum_probs=67.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEEcCC-----CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRPLPA-----SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. |.|.|.+.|+++ +..+.. ..++..........|.|.++...|.|.|.|.+.|..|...
T Consensus 13 ~~G~~v~l~C~~~--g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 90 (389)
T 2jll_A 13 YENGQVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQ 90 (389)
T ss_dssp ETTSEEEEEEEEE--CSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred eCCCeEEEEEEee--cccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcc
Confidence 4599999999998 999999999999 877754 3455554444566799999999999999999999999888
Q ss_pred eEEEEEEecCCC
Q psy16902 76 STALLSVQGRRE 87 (90)
Q Consensus 76 ~~~~l~v~~~~~ 87 (90)
....|.|..+|.
T Consensus 91 ~~~~l~V~~~P~ 102 (389)
T 2jll_A 91 KSMYLDIEYAPK 102 (389)
T ss_dssp EEEEEEEEEEEE
T ss_pred eEEEEEEEeCCE
Confidence 888888776554
No 66
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.57 E-value=1.7e-13 Score=77.60 Aligned_cols=84 Identities=27% Similarity=0.489 Sum_probs=71.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 304 ~~g~~~~l~C~~~--g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 381 (570)
T 3b43_A 304 KQDEHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV 381 (570)
T ss_dssp ESSCEEEEEEEEE--SSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECE
T ss_pred cCCCcEEEEEEEe--eCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEe
Confidence 4688999999998 99999999999999987776665554555667999999999999999999999998888888888
Q ss_pred ecCCCC
Q psy16902 83 QGRREG 88 (90)
Q Consensus 83 ~~~~~~ 88 (90)
..+|.+
T Consensus 382 ~~~P~~ 387 (570)
T 3b43_A 382 KEPPVF 387 (570)
T ss_dssp ECCCEE
T ss_pred cCCCee
Confidence 776643
No 67
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.57 E-value=2.1e-13 Score=67.67 Aligned_cols=80 Identities=18% Similarity=0.302 Sum_probs=67.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCC-CCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVL-HDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++..........+.+..+.. .|.|.|.|.+.|..|.......|.
T Consensus 116 ~~g~~~~l~C~~~--~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 193 (197)
T 3lcy_A 116 AVGSTLRLHVMYI--GRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVE 193 (197)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEE
T ss_pred cCCCeEEEEEEEe--eeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEE
Confidence 3588999999998 8999999999999998877776666555556789999985 799999999999999988888887
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|.+
T Consensus 194 V~~ 196 (197)
T 3lcy_A 194 IQD 196 (197)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 68
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.56 E-value=2.8e-13 Score=61.99 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=60.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +. |.+.|++++..+....++..........|.|.++...|.|.|.|.+.+ ......+.|
T Consensus 21 ~~G~~v~l~C~~~--~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V 92 (108)
T 2dm7_A 21 SEGATATLQCELS--KV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ----ERTSATLTV 92 (108)
T ss_dssp ETTSCEEEEEEBS--SS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT----EEEEEECEE
T ss_pred eCCCcEEEEEEeC--CC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC----CEEEEEEEE
Confidence 4689999999875 44 789999999888776777666666667799999999999999999843 455666777
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
...|.
T Consensus 93 ~~~p~ 97 (108)
T 2dm7_A 93 RALPA 97 (108)
T ss_dssp ECCCS
T ss_pred ecCCH
Confidence 66443
No 69
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.56 E-value=1.1e-13 Score=61.67 Aligned_cols=70 Identities=19% Similarity=0.307 Sum_probs=56.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE-eEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE-STALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~-~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+..... ..+.+.++...|.|.|.|.+.|..|... ....+.
T Consensus 16 ~~G~~~~l~C~~~--g~p~p~i~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 84 (91)
T 3bfo_A 16 MPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 84 (91)
T ss_dssp CTTSCEEEECEEE--CSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEE
T ss_pred cCCCcEEEEEEec--cCCCCEEEEEcCCeeCCcCCC---------CeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEE
Confidence 4689999999988 999999999999987765431 2588899999999999999999988644 334555
Q ss_pred Ee
Q psy16902 82 VQ 83 (90)
Q Consensus 82 v~ 83 (90)
|.
T Consensus 85 V~ 86 (91)
T 3bfo_A 85 ID 86 (91)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 70
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.3e-13 Score=62.52 Aligned_cols=77 Identities=17% Similarity=0.262 Sum_probs=61.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+ ..|.+.+.|++++..+....++..........|.|.++...|.|.|.|.+.+ ......|.|
T Consensus 24 ~~G~~v~L~C~~---~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~l~V 96 (102)
T 2eo1_A 24 EAGASATLSCEV---AQAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFRLQV 96 (102)
T ss_dssp ETTCCEEECCBC---SCSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT----EECCEEEEE
T ss_pred eCCCcEEEEEEe---cCCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC----CcEEEEEEE
Confidence 368899999976 3677899999999998777677666666667899999999999999998844 445567777
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.+++
T Consensus 97 ~~p~ 100 (102)
T 2eo1_A 97 AGQC 100 (102)
T ss_dssp ESCC
T ss_pred eCCC
Confidence 6654
No 71
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.56 E-value=1.2e-12 Score=64.95 Aligned_cols=79 Identities=25% Similarity=0.338 Sum_probs=63.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--CCEEcC---CCCceEEEEeCCeEEEEEcCCC-CCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--NGRPLP---ASSRATTTFKFGFISLDLLSIV-LHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|.+. +.|.|.+.|++ ++..+. ...++..........|.+..+. ..|.|.|.|.+.|..|....
T Consensus 105 ~~g~~v~l~C~~~--g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~ 182 (190)
T 2wv3_A 105 NEGQDAMMYCKSV--GYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASV 182 (190)
T ss_dssp ETTSCEEEEEEEE--CSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEE
T ss_pred eCCCcEEEEEEeC--ccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCccee
Confidence 4688999999997 99999999999 776653 3355555555555679999999 69999999999999998888
Q ss_pred EEEEEEe
Q psy16902 77 TALLSVQ 83 (90)
Q Consensus 77 ~~~l~v~ 83 (90)
...|.|.
T Consensus 183 ~~~l~V~ 189 (190)
T 2wv3_A 183 STVLRVR 189 (190)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8777764
No 72
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=6.6e-14 Score=65.19 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=60.7
Q ss_pred CCCceEEEEEEEccCCC---CCcEEEEeeCCEE-cCC--CCceEEEEe-C-----CeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGD---PSMRVDWFINGRP-LPA--SSRATTTFK-F-----GFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~---~~~~~~w~~~~~~-~~~--~~~~~~~~~-~-----~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|+++.|.|.+. +. |.|.+.|+++... +.. ..++.+... . ....|.|.++...|.|.|.|.+.|.
T Consensus 25 ~eG~~v~L~C~v~--g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~ 102 (118)
T 2edn_A 25 ETGKDAVVVAKVN--GKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAK 102 (118)
T ss_dssp ETTSCEECCEEEE--TTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECS
T ss_pred eCCCCEEEEEEEe--ccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEc
Confidence 5689999999997 54 7899999997421 111 123333211 1 1357999999999999999999999
Q ss_pred CcceEeEEEEEEecC
Q psy16902 71 SGSAESTALLSVQGR 85 (90)
Q Consensus 71 ~~~~~~~~~l~v~~~ 85 (90)
.|...+...|.|.++
T Consensus 103 ~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 103 DTCDSCGFNIDVEAP 117 (118)
T ss_dssp SCEEEEEECCEEECC
T ss_pred CCcEEEEEEEEEEcC
Confidence 999888988888764
No 73
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.53 E-value=5e-13 Score=64.11 Aligned_cols=82 Identities=17% Similarity=0.288 Sum_probs=61.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee---------CCEEcCCCCceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI---------NGRPLPASSRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
..|+++.|.|.+. +.+.+.+.|++ ++..+ ...++.... ......|.|.++...|.|.|.|.+.+. +
T Consensus 51 ~~G~~v~L~C~~~--~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~ 126 (145)
T 1z9m_A 51 VAGGTVVLKCQVK--DHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-P 126 (145)
T ss_dssp ETTSCEEEEEECS--CCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-S
T ss_pred EcCCCEEEEEEEc--CCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-C
Confidence 4689999999987 77888999994 33322 224444332 233457999999999999999999999 8
Q ss_pred ceEeEEEEEEecCCCC
Q psy16902 73 SAESTALLSVQGRREG 88 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~~ 88 (90)
.......|.|.++|..
T Consensus 127 ~~~~~~~L~V~~~P~~ 142 (145)
T 1z9m_A 127 VRTAKSLVTVLGIPQK 142 (145)
T ss_dssp CEEEEEEEEEECCCC-
T ss_pred CceEEEEEEEEeCCCC
Confidence 8888888888877653
No 74
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=1.8e-12 Score=63.95 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=63.3
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEee---C-CEEcCCC--CceEEEEeCCeEEEEEcCCC-CCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFI---N-GRPLPAS--SRATTTFKFGFISLDLLSIV-LHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~---~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+. +.| .+.+.|++ + ...+... .++..........|.+..+. ..|.|.|.|.+.|..|..
T Consensus 96 ~~g~~~~l~C~~~--g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~ 173 (184)
T 3b5h_A 96 NEGETAMLVCKSE--SVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD 173 (184)
T ss_dssp CTTSCEEEEEECC--CSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEE
T ss_pred cCCCcEEEEEEEC--CCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcc
Confidence 4689999999987 888 79999999 4 4444332 45555555666689999999 899999999999999998
Q ss_pred EeEEEEEEec
Q psy16902 75 ESTALLSVQG 84 (90)
Q Consensus 75 ~~~~~l~v~~ 84 (90)
.....|.|.+
T Consensus 174 ~~~~~l~V~~ 183 (184)
T 3b5h_A 174 QAIITLRVRS 183 (184)
T ss_dssp EEEEEEEEC-
T ss_pred eEEEEEEEec
Confidence 8888877754
No 75
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.53 E-value=2.7e-13 Score=70.89 Aligned_cols=80 Identities=26% Similarity=0.473 Sum_probs=64.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++.... ....|.+..+...|.|.|.|.+.|..|.......+.+
T Consensus 207 ~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 207 ERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp SSCCEEEEECBCC--CBSCCEEEEEETTEECCCTTTEEECS--TTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred cCCCeEEEEEEee--cCCCCeEEEEECCEECcCCccEEEcC--CccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence 4689999999987 89999999999999887766554432 2236899999999999999999999999999988887
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.+++
T Consensus 283 ~~~~ 286 (291)
T 2wim_A 283 FVQH 286 (291)
T ss_dssp ----
T ss_pred EEec
Confidence 6543
No 76
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.53 E-value=3.6e-13 Score=66.66 Aligned_cols=80 Identities=26% Similarity=0.466 Sum_probs=64.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+....++.... ....+.+.++...|.|.|.|.+.+..+.......+.|
T Consensus 17 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 92 (192)
T 2va4_A 17 ERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 92 (192)
T ss_dssp TSCCCEEEECEEE--CSSCCEEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCEEEEEeec--cCCCCeEEEEECCeEcCCCccEEEeC--CeeEEEEecCChhcCcEEEEEEEccccccceEEEEEE
Confidence 4699999999997 88999999999999887766655432 2236899999999999999999998887776666666
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
..+|
T Consensus 93 ~~~p 96 (192)
T 2va4_A 93 FVQP 96 (192)
T ss_dssp EEEE
T ss_pred EccC
Confidence 5444
No 77
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.53 E-value=8e-15 Score=68.53 Aligned_cols=82 Identities=23% Similarity=0.224 Sum_probs=64.2
Q ss_pred CCCCceEEEEEEEccCCCCCcE-EEEeeCCEEcCC--CCceEEE--EeCC--eEEEEEcCCCCCCC-eEEEEEEEcCCcc
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMR-VDWFINGRPLPA--SSRATTT--FKFG--FISLDLLSIVLHDS-GEYTVRVTNNSGS 73 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~~~--~~~~~~~--~~~~--~~~~~~~~~~~~~~-g~y~C~~~~~~~~ 73 (90)
..+|+.+.|.|.+. +.|.|. +.|++++..+.. ..++... .... ...|.|.++...|. |.|.|.+.|..|.
T Consensus 25 ~~~G~~v~l~C~~~--g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~ 102 (122)
T 2cry_A 25 ALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGS 102 (122)
T ss_dssp CCTTSCCCCCEEEC--CSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCE
T ss_pred EecCCCEEEEEEEe--ecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCe
Confidence 35689999999998 999987 999999887764 2444432 1222 44699999999998 9999999999999
Q ss_pred eEeEEEEEEecC
Q psy16902 74 AESTALLSVQGR 85 (90)
Q Consensus 74 ~~~~~~l~v~~~ 85 (90)
......|.|.++
T Consensus 103 ~~~~~~l~V~~~ 114 (122)
T 2cry_A 103 DTEIIRLKEQGS 114 (122)
T ss_dssp EEEEECCCCSCS
T ss_pred EEEEEEEEECCC
Confidence 888877777644
No 78
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.52 E-value=2.1e-13 Score=73.26 Aligned_cols=82 Identities=21% Similarity=0.310 Sum_probs=65.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEe-------CCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFK-------FGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. |.|.|.+.|++++..+........... .....+.+..+...|.|.|.|.+.|..|...
T Consensus 259 ~~g~~v~l~C~~~--g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 336 (347)
T 2ifg_A 259 VEMHHWCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 336 (347)
T ss_dssp EESSSEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ccCceEEEEEEee--ecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCcee
Confidence 3578899999998 899999999999998875544332211 1134589999999999999999999999988
Q ss_pred eEEEEEEecCC
Q psy16902 76 STALLSVQGRR 86 (90)
Q Consensus 76 ~~~~l~v~~~~ 86 (90)
....+.|.++|
T Consensus 337 ~~~~l~V~~~P 347 (347)
T 2ifg_A 337 ASIMAAFMDNP 347 (347)
T ss_dssp EEEEECSCCCC
T ss_pred eEEEEEecCCC
Confidence 88888877654
No 79
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.52 E-value=1.1e-12 Score=74.78 Aligned_cols=78 Identities=26% Similarity=0.383 Sum_probs=70.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.+.|.+. |.|.|.+.|+++++.+..+.++..........|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 495 ~~G~~~~~~~~v~--g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 495 GEGQSANFYCRVI--ASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp CTTSCEEEEEEEE--CSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEE--ccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEE
Confidence 4688999999998 99999999999999998888887777777888999999999999999999999999888887766
No 80
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.52 E-value=5.9e-13 Score=65.74 Aligned_cols=77 Identities=27% Similarity=0.495 Sum_probs=63.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+....+...... ...+.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 111 ~~g~~v~l~C~~~--g~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 111 ERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp TSCCCEEEECEEE--EESCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEc--cCCCCeEEEEECCEECcCCCcEEEecC--CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 4588999999997 889999999999998877665544322 235899999999999999999999998888887776
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 187 ~ 187 (189)
T 2v5t_A 187 F 187 (189)
T ss_dssp E
T ss_pred E
Confidence 4
No 81
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.52 E-value=4.7e-12 Score=63.76 Aligned_cols=81 Identities=22% Similarity=0.296 Sum_probs=64.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcC-CCCceEEEE-eCCeEEEEEcCCCC-CCCeEEEEEEEcCCcc-eEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLP-ASSRATTTF-KFGFISLDLLSIVL-HDSGEYTVRVTNNSGS-AESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~y~C~~~~~~~~-~~~~~ 78 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+. ...++.... ..+...|.+..+.. .|.|.|.|.+.+..+. .....
T Consensus 19 ~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~ 96 (212)
T 2yd1_A 19 RVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADA 96 (212)
T ss_dssp ETTSCEEEEEEEE--CSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEE
T ss_pred ecCCEEEEEEEEc--cCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeE
Confidence 4689999999998 89999999999999886 345554433 23446799999999 9999999999998887 66666
Q ss_pred EEEEecC
Q psy16902 79 LLSVQGR 85 (90)
Q Consensus 79 ~l~v~~~ 85 (90)
.|.|...
T Consensus 97 ~l~V~~~ 103 (212)
T 2yd1_A 97 TLTIYEG 103 (212)
T ss_dssp EEEEECT
T ss_pred EEEEecc
Confidence 7777654
No 82
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.52 E-value=9.6e-13 Score=66.33 Aligned_cols=81 Identities=23% Similarity=0.360 Sum_probs=60.7
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC---CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE-E
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS---SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA-L 79 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~-~ 79 (90)
.|+.+.|.|.+. +.|.|.+.|++++..+... .++..........|.+..+...|.|.|.|.+.|..|...... .
T Consensus 122 ~g~~v~l~C~~~--g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~ 199 (212)
T 2yd6_A 122 RTRTATMLCAAS--GNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPAN 199 (212)
T ss_dssp TTSCEEEEEEEE--CSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred cCCCEEEEEEec--CCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccccccc
Confidence 588999999998 9999999999999887643 344443344456799999999999999999999998765543 5
Q ss_pred EEEecCC
Q psy16902 80 LSVQGRR 86 (90)
Q Consensus 80 l~v~~~~ 86 (90)
+.+...+
T Consensus 200 l~~~~~~ 206 (212)
T 2yd6_A 200 LYVRGTK 206 (212)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 5555443
No 83
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.51 E-value=8.9e-13 Score=65.38 Aligned_cols=79 Identities=34% Similarity=0.532 Sum_probs=63.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.... +...........|.+.++...|.|.|.|.+.+..+.......+
T Consensus 18 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (194)
T 2a38_A 18 LEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAEL 95 (194)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ECCCEEEEEEEEE--ecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEE
Confidence 4689999999987 88899999999998776542 4444444556679999999999999999999988877777666
Q ss_pred EEe
Q psy16902 81 SVQ 83 (90)
Q Consensus 81 ~v~ 83 (90)
.+.
T Consensus 96 ~v~ 98 (194)
T 2a38_A 96 LVK 98 (194)
T ss_dssp EEE
T ss_pred EEc
Confidence 665
No 84
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.51 E-value=1.3e-12 Score=65.00 Aligned_cols=81 Identities=27% Similarity=0.398 Sum_probs=64.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC-CceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS-SRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+... .++.... ..+...|.+..+...|.|.|.|.+.+..+.......|
T Consensus 17 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 94 (197)
T 2j8h_A 17 RYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASL 94 (197)
T ss_dssp ETTSCEEEEEEEE--CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred cCCCEEEEEEEEe--ecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEE
Confidence 4689999999998 8899999999999887654 3443332 3445579999999999999999999988877777777
Q ss_pred EEecC
Q psy16902 81 SVQGR 85 (90)
Q Consensus 81 ~v~~~ 85 (90)
.|..+
T Consensus 95 ~V~~~ 99 (197)
T 2j8h_A 95 EVEVP 99 (197)
T ss_dssp EEEEE
T ss_pred EEcCC
Confidence 76544
No 85
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.51 E-value=1.5e-12 Score=68.49 Aligned_cols=82 Identities=18% Similarity=0.265 Sum_probs=68.6
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcC-CCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLS-IVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.|+.+.|.|.+. +.|.|.+.|++++..+....++..........+.+.. +...|.|.|.|.+.|..|.......+.+
T Consensus 118 ~g~~~~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 195 (305)
T 2nzi_A 118 RGEVVSIKIPFS--GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (305)
T ss_dssp TTCCEEEEEEEE--EESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEE
Confidence 588999999998 9999999999999887766666555444556788998 9999999999999999999888888888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.|.
T Consensus 196 ~~~P~ 200 (305)
T 2nzi_A 196 ADVPD 200 (305)
T ss_dssp EBCCC
T ss_pred ecCCC
Confidence 76553
No 86
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.50 E-value=2e-12 Score=64.00 Aligned_cols=82 Identities=20% Similarity=0.379 Sum_probs=64.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee-CCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce-EeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI-NGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA-ESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~-~~~~~l 80 (90)
.+|+.+.|.|.+. +.|. .+.|++ ++..+....++..........|.+..+...|.|.|.|.+.+..+.. .....+
T Consensus 15 ~~G~~v~L~C~~~--~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l 91 (189)
T 2v44_A 15 SVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 91 (189)
T ss_dssp ETTCCEEEEEEEE--ECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEE
T ss_pred ecCCcEEEEEEee--cCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEE
Confidence 4689999999987 7766 899999 7777766667766666666689999999999999999999987765 445566
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.+..+|.
T Consensus 92 ~v~~~p~ 98 (189)
T 2v44_A 92 EIYQKLT 98 (189)
T ss_dssp EEECCCE
T ss_pred EEecCCc
Confidence 6665543
No 87
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.50 E-value=1.3e-12 Score=59.68 Aligned_cols=80 Identities=18% Similarity=0.299 Sum_probs=55.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE-eC-------CeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF-KF-------GFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+++.|.|.+...+.+.+.+.|++++..+.......... .. ....|.|..+...|.|.|.|.+.|..|..
T Consensus 23 ~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~ 102 (112)
T 3so5_A 23 IXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSS 102 (112)
T ss_dssp CTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcE
Confidence 46899999999872223468899999998876542111110 00 12469999999999999999999998863
Q ss_pred -EeEEEEEE
Q psy16902 75 -ESTALLSV 82 (90)
Q Consensus 75 -~~~~~l~v 82 (90)
.....|.|
T Consensus 103 ~s~~~~l~V 111 (112)
T 3so5_A 103 YSVXAXLTI 111 (112)
T ss_dssp ECCCEEEEE
T ss_pred EEeEEEEEe
Confidence 35555544
No 88
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.50 E-value=2.3e-13 Score=73.88 Aligned_cols=76 Identities=29% Similarity=0.489 Sum_probs=64.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+....++... .+ .|.+..+...|.|.|.|.+.|..|...+...|.|
T Consensus 308 ~~g~~v~l~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V 381 (384)
T 3kld_A 308 AMEESVFWECKAN--GRPKPTYRWLKNGDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV 381 (384)
T ss_dssp CTTCCEEEECEEE--EESCCEEEEEETTEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCEEEEeECC--ccCCCeEEEEECCEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEE
Confidence 4588999999998 9999999999999988766665542 22 5899999999999999999999999998888887
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 382 ~~ 383 (384)
T 3kld_A 382 IA 383 (384)
T ss_dssp C-
T ss_pred ec
Confidence 53
No 89
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.49 E-value=7.8e-13 Score=59.51 Aligned_cols=75 Identities=23% Similarity=0.241 Sum_probs=56.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+++.|.|.+. .+.|.+.+.|++++...... .. .. ... .|.+.++...|.|.|.|.+.|..|.......|.|
T Consensus 23 ~~G~~v~l~C~~~-~~~p~~~v~W~k~~~~~~~~-~~-~~-~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 23 RPGADVTFICTAK-SKSPAYTLVWTRLHNGKLPS-RA-MD-FNG--ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp CTTCCEEEEEEEE-ESSSCCEEEEEEGGGBCCCT-TE-EE-ETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCEEEEEeCC-CCCCCcEEEEEeCCCCCCCc-ee-ec-CCC--EEEEeCCChhhCEEEEEEecCCCCccccEEEEEE
Confidence 5689999999985 24788999999975333222 11 11 122 5899999999999999999999998887777766
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 97 ~ 97 (98)
T 1gl4_B 97 Q 97 (98)
T ss_dssp C
T ss_pred e
Confidence 4
No 90
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.49 E-value=8e-13 Score=69.08 Aligned_cols=78 Identities=17% Similarity=0.313 Sum_probs=63.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC----ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS----RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+.... ++... .....|.+..+...|.|.|.|.+.|..|......
T Consensus 209 ~~g~~v~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 284 (291)
T 1qz1_A 209 NLGQSVTLVCDAD--GFPEPTMSWTKDGEPIENEEEDDEKHIFS--DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASI 284 (291)
T ss_dssp TSCCCEEEEEEEE--EESCCEEEEEETTEECCCC--CCSSEEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ccCceEEEEEEEE--EeCCCcEEEEECCEECcCCCCCCcceEEc--CCCcEEEEEecChhcCEEEEEEEEeCCCceEEEE
Confidence 4689999999998 89999999999999876543 33322 2234689999999999999999999999888888
Q ss_pred EEEEec
Q psy16902 79 LLSVQG 84 (90)
Q Consensus 79 ~l~v~~ 84 (90)
.|.|.+
T Consensus 285 ~l~V~~ 290 (291)
T 1qz1_A 285 HLKVFA 290 (291)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888764
No 91
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.49 E-value=4.4e-13 Score=70.95 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=61.9
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. |.|.| .+.|++++..+.... ..... .|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 230 ~~g~~v~l~C~~~--g~P~p~~v~W~~~~~~l~~~~----~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 301 (313)
T 4fqp_A 230 LGQNEATLTCDAR--SNPEPTGYNWSTTMGPLPPFA----VAQGA--QLLIRPVDKPINTTLICNVTNALGARQAELTVQ 301 (313)
T ss_dssp TTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTE----EEETT--EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEE
T ss_pred cCCCeEEEEEEec--CCCCCcEEEEEECCEECCCce----EEeCC--EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEE
Confidence 3478899999998 89988 699999998765432 11222 588999999999999999999999999888999
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|...|.
T Consensus 302 V~~~PP 307 (313)
T 4fqp_A 302 VKEGPP 307 (313)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 886553
No 92
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.48 E-value=1.8e-12 Score=67.79 Aligned_cols=83 Identities=18% Similarity=0.210 Sum_probs=62.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCc-eEEEE----eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSR-ATTTF----KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
.+|+++.|.|.+. +.|.|.+.|++++........ ..... ......|.+..+...|.|.|.|.+.|..|.....
T Consensus 194 ~~G~~v~L~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 271 (289)
T 3mjg_X 194 RQGENITLMCIVI--GNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE 271 (289)
T ss_dssp ETTSCEEEEEEEE--SCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEE
T ss_pred EcCCCEEEEEEEC--CCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeE
Confidence 4689999999998 899999999987654332211 11110 1123469999999999999999999999999999
Q ss_pred EEEEEecCCC
Q psy16902 78 ALLSVQGRRE 87 (90)
Q Consensus 78 ~~l~v~~~~~ 87 (90)
..|.+.+.+.
T Consensus 272 ~~l~v~~~~~ 281 (289)
T 3mjg_X 272 KAINITVVES 281 (289)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEEEEec
Confidence 9888876554
No 93
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.48 E-value=5.6e-13 Score=67.35 Aligned_cols=85 Identities=11% Similarity=0.123 Sum_probs=59.2
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCCEEcCCCCc-eEEEE-------eCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFINGRPLPASSR-ATTTF-------KFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|.+. +.| .+.+.|++++..+..... ..... ......|.|.++...|.|.|.|.+.|..|
T Consensus 118 ~~G~~v~L~C~~~--g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g 195 (213)
T 2x1w_L 118 SVGEKLVLNCTAR--TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 195 (213)
T ss_dssp ETTCCEEEEEEEE--ECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred cCCCCEEEEEEEE--CCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCC
Confidence 4689999999987 654 457999998865332111 00000 11123599999999999999999999999
Q ss_pred ceEeEEEEEEecCCCCC
Q psy16902 73 SAESTALLSVQGRREGE 89 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~~~ 89 (90)
.......|.|.+.|.|.
T Consensus 196 ~~~~~~~l~V~~~p~i~ 212 (213)
T 2x1w_L 196 TKKNSTFVRVHEDPIEG 212 (213)
T ss_dssp EEEEEEEEEEEC-----
T ss_pred cEEEEEEEEEecccccC
Confidence 99989999999888763
No 94
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.48 E-value=5.3e-12 Score=62.42 Aligned_cols=78 Identities=21% Similarity=0.388 Sum_probs=61.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEEcCC-----CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRPLPA-----SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
..|+.+.|.|.+. +.|.+.+.|+++ +..+.. ..++..........+.+..+...|.|.|.|.+.|..|...
T Consensus 107 ~~g~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 184 (192)
T 2va4_A 107 YENGQVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQ 184 (192)
T ss_dssp CTTSEEEEEEEEE--EESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred EeCCeEEEEEEec--CCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceE
Confidence 3588999999987 889999999998 555543 2344444444556799999999999999999999999887
Q ss_pred eEEEEEE
Q psy16902 76 STALLSV 82 (90)
Q Consensus 76 ~~~~l~v 82 (90)
....|.|
T Consensus 185 ~~~~l~V 191 (192)
T 2va4_A 185 KSMYLDI 191 (192)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777765
No 95
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.48 E-value=5.9e-13 Score=70.13 Aligned_cols=76 Identities=14% Similarity=0.290 Sum_probs=60.6
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.| .+.|++++..+....++... .+...|.+.++...|.|.|.|.+.|..|.......|.
T Consensus 234 ~~G~~~~l~C~~~--~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 309 (312)
T 2y23_A 234 TGECNVLLKCKVA--NIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 309 (312)
T ss_dssp ETTTEEEEEEEEE--SCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEEC
T ss_pred eCCCEEEEEEEEc--CCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEE
Confidence 4688999999998 88888 99999999887644443332 3345799999999999999999999999988877765
Q ss_pred E
Q psy16902 82 V 82 (90)
Q Consensus 82 v 82 (90)
+
T Consensus 310 i 310 (312)
T 2y23_A 310 D 310 (312)
T ss_dssp S
T ss_pred e
Confidence 4
No 96
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=63.28 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=53.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC-----ceEEEEeCCeEEEEE--cCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS-----RATTTFKFGFISLDL--LSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
..|+++.|.|.+. |.|.|.+.|++++..+.... ............+.+ .++...|.|.|.|.+.|..|...
T Consensus 22 ~~G~~v~L~C~~~--g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~ 99 (117)
T 2v9t_A 22 SKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (117)
T ss_dssp CTTCCEEECCEEE--EESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEE
T ss_pred cCCCcEEEEEECC--ccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceE
Confidence 4689999999998 99999999999998876432 112211222111111 24578899999999999998766
Q ss_pred eEE-EEEEe
Q psy16902 76 STA-LLSVQ 83 (90)
Q Consensus 76 ~~~-~l~v~ 83 (90)
+.. .+.+.
T Consensus 100 s~~~~l~~~ 108 (117)
T 2v9t_A 100 SHDASLEVA 108 (117)
T ss_dssp CCCEEEEEC
T ss_pred eeeEEEEhh
Confidence 554 44443
No 97
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.47 E-value=3.9e-13 Score=72.96 Aligned_cols=79 Identities=29% Similarity=0.414 Sum_probs=65.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....+...... ..+.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 325 ~~g~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 399 (403)
T 3laf_A 325 YESMDIEFECAVS--GKPVPTVNWMKNGDVVIPSDYFQIVGG---SNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIV 399 (403)
T ss_dssp CTTCCEEECCEEE--EESCCEEEEEETTEECCCSSSEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEC
T ss_pred ecCCeEEEEEEEe--eccCCEEEEEECCEECCCCCcEEEecC---ccEEEeccccccCEEEEEEEEcCCceEEEEEEEEE
Confidence 4688999999998 899999999999998876655444322 25889999999999999999999999999988888
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
.++|
T Consensus 400 ~~P~ 403 (403)
T 3laf_A 400 PKPA 403 (403)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 7664
No 98
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.47 E-value=2.7e-12 Score=63.63 Aligned_cols=76 Identities=17% Similarity=0.240 Sum_probs=61.2
Q ss_pred CceEEEEEEEccCCCCC--cEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 5 KRKIHFEARIEPVGDPS--MRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 5 g~~~~l~C~~~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
|+.+.|.|.+. +.+. +.+.|++++..+....... ....|.+.++...|.|.|.|.+.+. +.......|.|
T Consensus 18 G~~v~l~C~~~--~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V 89 (190)
T 2wv3_A 18 LLPVTLQCNLT--SSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEV 89 (190)
T ss_dssp SSCEEEEEEEE--ECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEE
T ss_pred CceEEEEEEec--cCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEE
Confidence 99999999987 7766 8899999998876543221 3356999999999999999999998 77777778888
Q ss_pred ecCCCC
Q psy16902 83 QGRREG 88 (90)
Q Consensus 83 ~~~~~~ 88 (90)
..+|.+
T Consensus 90 ~~~p~~ 95 (190)
T 2wv3_A 90 KAAPDI 95 (190)
T ss_dssp ECCCEE
T ss_pred ecCCcc
Confidence 766643
No 99
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.47 E-value=3.1e-12 Score=67.30 Aligned_cols=82 Identities=28% Similarity=0.435 Sum_probs=65.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC-CceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS-SRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+... .++... ...+...|.+.++...|.|.|.|.+.|..|.......|
T Consensus 17 ~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (305)
T 2nzi_A 17 RYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASL 94 (305)
T ss_dssp CTTCCEEEEEEEE--CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred eCCCcEEEEEEEe--CCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEE
Confidence 4689999999997 8999999999999887654 344333 23445579999999999999999999998887777777
Q ss_pred EEecCC
Q psy16902 81 SVQGRR 86 (90)
Q Consensus 81 ~v~~~~ 86 (90)
.|..++
T Consensus 95 ~V~~~p 100 (305)
T 2nzi_A 95 EVEVPA 100 (305)
T ss_dssp EECEEE
T ss_pred EEecCC
Confidence 775443
No 100
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.46 E-value=2e-12 Score=66.06 Aligned_cols=84 Identities=27% Similarity=0.401 Sum_probs=60.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee----CCEEcCCCCce--EEEE------eCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI----NGRPLPASSRA--TTTF------KFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~----~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+.+.|.|.+. +.|.+.+.|++ ++..+...... .... ......|.+..+...|.|.|.|.+.|.
T Consensus 127 ~~g~~v~L~C~~~--~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 204 (241)
T 3grw_A 127 VLGSDVEFHCKVY--SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNF 204 (241)
T ss_dssp CTTCCEEEEEEEE--CSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cCCCEEEEEEEEe--cCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecC
Confidence 4588999999998 89999999999 77665443221 1100 012345899999999999999999999
Q ss_pred CcceEeEEEEEEecCCCC
Q psy16902 71 SGSAESTALLSVQGRREG 88 (90)
Q Consensus 71 ~~~~~~~~~l~v~~~~~~ 88 (90)
.|.......|.|.++|..
T Consensus 205 ~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 205 IGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp SCEEEEEEEEEC------
T ss_pred cceEEEEEEEEecCCCCC
Confidence 999988888888776654
No 101
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=2.6e-12 Score=63.24 Aligned_cols=83 Identities=18% Similarity=0.278 Sum_probs=62.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCC--eEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFG--FISLDLLSIVLHDSGEYTVRVTNNSGS-AESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~~ 79 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+....+........ ...|.+.++...|.|.|.|.+.+..+. ......
T Consensus 15 ~~G~~v~l~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 92 (182)
T 1rhf_A 15 SQGQPVKLNCSVE--GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVW 92 (182)
T ss_dssp ETTCCEEEEEEEE--SCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEE
T ss_pred eCCCcEEEEEEEe--CCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEE
Confidence 4689999999998 88899999999998887654443332222 346899999999999999999998664 334556
Q ss_pred EEEecCCC
Q psy16902 80 LSVQGRRE 87 (90)
Q Consensus 80 l~v~~~~~ 87 (90)
|.|..+|.
T Consensus 93 l~V~~~p~ 100 (182)
T 1rhf_A 93 LTVEGVPF 100 (182)
T ss_dssp EEEECSCE
T ss_pred EEEecCCe
Confidence 77766554
No 102
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.46 E-value=6.5e-12 Score=63.45 Aligned_cols=67 Identities=16% Similarity=0.296 Sum_probs=54.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeC--CeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKF--GFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|+.+.|.|.+. .+.|.|.+.|+++++.+....++...... +...|.|.++...|.|.|.|.+.|.
T Consensus 15 ~eg~~v~l~c~~~-~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng 83 (207)
T 3rbs_A 15 LEKGQVRFWMQAE-KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG 83 (207)
T ss_dssp CGGGCEEEEEECS-CCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEET
T ss_pred EeCCeEEEEEEEe-cCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECC
Confidence 4688899999885 24799999999999998776666555433 4557999999999999999999984
No 103
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.46 E-value=8.1e-13 Score=66.27 Aligned_cols=81 Identities=27% Similarity=0.311 Sum_probs=60.7
Q ss_pred CCCceEEEEEEE-ccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE-EEE
Q psy16902 3 PQKRKIHFEARI-EPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST-ALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~-~~l 80 (90)
..|+.+.|.|.+ . +.|.+.+.|++++..+.......... .. .|.+..+...|.|.|.|.+.|..|..... ..|
T Consensus 124 ~~g~~~~l~C~~~~--~~p~~~v~W~~~~~~l~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l 198 (212)
T 2v9r_A 124 AVGEPAVMECQPPR--GHPEPTISWKKDGSPLDDKDERITIR-GG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAEL 198 (212)
T ss_dssp ETTSCEEEECBCCC--EESCCEEEEEETTEEECTTSTTEEEE-TT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred cCCCcEEEEEecCC--CCCCCEEEEEECCccCCCCcceEEcc-CC--eEEEeeCCHhhCeeEEEEEecccCceecceEEE
Confidence 358899999987 5 88999999999999887543222222 22 58999999999999999999998876654 688
Q ss_pred EEecCCCC
Q psy16902 81 SVQGRREG 88 (90)
Q Consensus 81 ~v~~~~~~ 88 (90)
.|..+|.+
T Consensus 199 ~V~~~P~~ 206 (212)
T 2v9r_A 199 TVLERPSF 206 (212)
T ss_dssp EEEC----
T ss_pred EEEeCchH
Confidence 88887765
No 104
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.46 E-value=8.5e-12 Score=62.87 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=62.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE-eCCeEEEEEcCC-CCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF-KFGFISLDLLSI-VLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.......... ......|.+.++ ...|.|.|.|.+.+..+.......|
T Consensus 19 ~~G~~v~L~C~~~--g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l 96 (212)
T 2yd6_A 19 VSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRL 96 (212)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred ecCCeEEEEEEEe--eCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEE
Confidence 4689999999997 88999999999998876543322221 233456899999 4999999999999998887777777
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.|..
T Consensus 97 ~V~~ 100 (212)
T 2yd6_A 97 TVLR 100 (212)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7764
No 105
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.45 E-value=5e-13 Score=67.42 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=51.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC----CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA----SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.+|+.+.|.|.+. |.|.|.+.|++++..+.. ..++....++....+.+..+...|.|.|.|.+.|..|....
T Consensus 119 ~~g~~~~l~C~~~--G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 119 PDFSVLTVTCTVN--AFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp SCSCCEEEEEEEE--EESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred cCCCEEEEEEEcC--CCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 4689999999998 999999999987654322 23444433444445666788999999999999999997664
No 106
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.45 E-value=7.5e-13 Score=65.55 Aligned_cols=79 Identities=24% Similarity=0.281 Sum_probs=61.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe-EEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES-TALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~~~l~ 81 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+....+....... .+.+..+...|.|.|.|.+.|..|.... ...|.
T Consensus 113 ~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 187 (192)
T 2iep_A 113 IEGLKAVLPCTTM--GNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLE 187 (192)
T ss_dssp ETTSCEEECCEEE--EESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred eCCCcEEEEEEEe--ccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 3588999999987 8899999999999988766655443222 4889999999999999999999887743 46676
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
|..+|
T Consensus 188 V~~pp 192 (192)
T 2iep_A 188 VEVFA 192 (192)
T ss_dssp EEC--
T ss_pred EEeCC
Confidence 66543
No 107
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.45 E-value=8.6e-13 Score=66.56 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=61.0
Q ss_pred CCCceEEEEEEEcc-CCCCCcEEEEeeCCEEcC-----------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEP-VGDPSMRVDWFINGRPLP-----------------ASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
..|+++.|.|.... .+.|.+.+.|++++.... ...++......+...|.|.++...|.|.|.
T Consensus 6 ~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (203)
T 4fa8_A 6 FLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYL 85 (203)
T ss_dssp ETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEE
Confidence 35999999996421 267899999998753211 011222333445567999999999999999
Q ss_pred EEEEcCCcceEeEEEEEEecCCC
Q psy16902 65 VRVTNNSGSAESTALLSVQGRRE 87 (90)
Q Consensus 65 C~~~~~~~~~~~~~~l~v~~~~~ 87 (90)
|.+.|..|.......|.|..+|.
T Consensus 86 C~a~n~~g~~~~~~~l~V~~p~~ 108 (203)
T 4fa8_A 86 CRMKLGETEVTKQEHLSVVKPLT 108 (203)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEEEecCCce
Confidence 99999998888888777765543
No 108
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.45 E-value=2.5e-12 Score=64.78 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=61.1
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC-CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE-EEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS-SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST-ALLS 81 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~-~~l~ 81 (90)
.|+.+.|.|.+. +.|.+.+.|++++..+... .++... .+ .|.+..+...|.|.|.|.+.|..|..... ..|.
T Consensus 124 ~g~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~ 197 (212)
T 2yd1_A 124 VGHTVLMTCKAI--GNPTPNIYWIKNQTKVDMSNPRYSLK--DG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLY 197 (212)
T ss_dssp TTCCEEECCEEE--CSSCCEEEEEETTEECCTTSTTEEEE--TT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred cCCeEEEEEEec--cCCCCeEEEEECCeEcccCCCeEEcc--CC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEE
Confidence 588999999998 9999999999999887653 333222 22 58999999999999999999999988765 6777
Q ss_pred EecC
Q psy16902 82 VQGR 85 (90)
Q Consensus 82 v~~~ 85 (90)
|...
T Consensus 198 V~~~ 201 (212)
T 2yd1_A 198 VKVR 201 (212)
T ss_dssp EEC-
T ss_pred EEec
Confidence 7654
No 109
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.45 E-value=1.1e-12 Score=68.62 Aligned_cols=82 Identities=17% Similarity=0.126 Sum_probs=59.4
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEc----CCCCceEEE---EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPL----PASSRATTT---FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+. +.|.|. +.|++++..+ ......... .......|.+..+...|.|.|.|.+.|..|..
T Consensus 201 ~~G~~v~l~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~ 278 (290)
T 2o26_X 201 KKGDTFTVVCTIK--DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSA 278 (290)
T ss_dssp CTTCCEEEEEEEE--ESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred ecCCcEEEEEEEe--cCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence 5689999999998 889886 9999998652 222221111 11223469999999999999999999999998
Q ss_pred EeEEEEEEecCC
Q psy16902 75 ESTALLSVQGRR 86 (90)
Q Consensus 75 ~~~~~l~v~~~~ 86 (90)
.....|.|.++|
T Consensus 279 ~~~~~l~V~~~P 290 (290)
T 2o26_X 279 NVTTTLKVVEKG 290 (290)
T ss_dssp EEEEEECC----
T ss_pred EEEEEEEEEeCC
Confidence 888888776654
No 110
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.44 E-value=7.3e-12 Score=67.80 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=66.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+.... ++..........|.+..+...|.|.|.|.+.|..|.......+
T Consensus 113 ~~g~~~~l~C~~~--g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 190 (389)
T 2jll_A 113 WEGNPINISCDVK--SNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYIL 190 (389)
T ss_dssp CTTCCEEEEECEE--EESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCEEEEEEEEE--ecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 4688999999987 89999999999999886543 4544444555679999999999999999999999987777766
Q ss_pred EEecCC
Q psy16902 81 SVQGRR 86 (90)
Q Consensus 81 ~v~~~~ 86 (90)
.+...|
T Consensus 191 ~v~~~P 196 (389)
T 2jll_A 191 ALADVP 196 (389)
T ss_dssp EECCCC
T ss_pred EecCCC
Confidence 665443
No 111
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.44 E-value=1.6e-11 Score=61.59 Aligned_cols=76 Identities=21% Similarity=0.266 Sum_probs=60.3
Q ss_pred CCceEEEEEEEccCC-CCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 4 QKRKIHFEARIEPVG-DPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.++.+.|.|.+. + .|.+.+.|++++..+....++..........|.+.++...|.|.|.|.+.+..+.......+.
T Consensus 16 ~~~~~~l~C~~~--~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 16 TAEGIQLYSFVT--YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp CSSEEEEEEEBS--SCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred cCceEEEEEEEe--ccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 356677788775 5 458999999999998877777766666666799999999999999999999877766555543
No 112
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.7e-13 Score=61.55 Aligned_cols=61 Identities=25% Similarity=0.436 Sum_probs=49.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+++.|.|.+. +.|.+.+.|++++..+.... ...|.+.++...|.|.|.|.+.|..+..
T Consensus 23 ~~G~~v~l~C~~~--g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 83 (96)
T 2ens_A 23 APGGTVTLTCEVP--AQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATHSSHGP 83 (96)
T ss_dssp CTTCEEEEECCCS--SCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECCSSCCC
T ss_pred cCCCeEEEEEEEc--cCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEeCCCCc
Confidence 4689999999887 88999999999987765432 1258889999999999999999965543
No 113
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.43 E-value=1.9e-12 Score=69.94 Aligned_cols=75 Identities=29% Similarity=0.519 Sum_probs=63.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....++... .. .|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 307 ~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 307 DIGSDLRWSCVAS--GKPRPAVRWLRDGQPLASQNRIEVS--GG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380 (382)
T ss_dssp ETTCCEEEECEEE--EESCCEEEEEETTEECCCCSSEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEee--eecCCEEEEEECCEECCCCceEEEE--CC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEE
Confidence 3588999999998 8999999999999988776665442 22 5899999999999999999999999888888877
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 381 ~ 381 (382)
T 1cs6_A 381 Q 381 (382)
T ss_dssp E
T ss_pred e
Confidence 5
No 114
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.43 E-value=2.8e-12 Score=64.25 Aligned_cols=79 Identities=18% Similarity=0.252 Sum_probs=59.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE-EEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA-LLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~-~l~ 81 (90)
..|+.+.|.|.+. +.| |.+.|++++..+....++...... ..|.+..+...|.|.|.|.+.|..|...+.. .|.
T Consensus 123 ~~g~~v~l~C~~~--~~p-p~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 123 KELDSVTLTCLSN--DIG-ANIQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp CTTCCEEEEEECS--CTT-CEEEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEEC
T ss_pred eeCCCEEEEEECC--CCC-CceEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeee
Confidence 4688999999986 655 899999999988776666554332 3689999999999999999999988766543 555
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
+..++
T Consensus 198 v~~~~ 202 (208)
T 3r4d_A 198 IIFDP 202 (208)
T ss_dssp CC---
T ss_pred EEeCC
Confidence 54443
No 115
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.43 E-value=6.3e-12 Score=62.84 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=58.9
Q ss_pred CCCceEEEEEEEccCCCCC-----cEEEEee-CCEEcCCCCceEEEEe---CCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPS-----MRVDWFI-NGRPLPASSRATTTFK---FGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-----~~~~w~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+++.|.|.+. +.|. +.+.|++ ++.......+..+... .+...|.|.++...|.|.|.|.+.+..+.
T Consensus 15 ~~G~~v~L~C~~~--~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 92 (202)
T 3bp6_B 15 DVGSSVSLECDFD--RRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAW 92 (202)
T ss_dssp ETTSCEEEEEEEC--TTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eCCCcEEEEEEec--CCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCc
Confidence 4689999999987 7765 8899999 4443333344443321 13457999999999999999999998887
Q ss_pred eEeEEEEEEecC
Q psy16902 74 AESTALLSVQGR 85 (90)
Q Consensus 74 ~~~~~~l~v~~~ 85 (90)
......|.|..+
T Consensus 93 ~~~~~~l~V~~~ 104 (202)
T 3bp6_B 93 DYKYLTVKVKAS 104 (202)
T ss_dssp EEEEEEEEEEBC
T ss_pred ceEEEEEEecCC
Confidence 777777777654
No 116
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.43 E-value=1.9e-12 Score=64.37 Aligned_cols=75 Identities=23% Similarity=0.363 Sum_probs=60.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....+ .... ...+.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 126 ~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~--~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 199 (201)
T 3s97_C 126 LMGQNVTLECFAL--GNPVPDIRWRKVLEPMPSTAE--ISTS--GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199 (201)
T ss_dssp ETTCCEEEEEEEE--EESCCEEEEEETTBCCCTTCE--EETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCcEEEEEEcc--CCCCCceEEEeCCCcCCCcee--ecCC--CCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEE
Confidence 3588999999987 889999999999986654322 2211 225899999999999999999999998888888777
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 200 ~ 200 (201)
T 3s97_C 200 Q 200 (201)
T ss_dssp E
T ss_pred e
Confidence 5
No 117
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.42 E-value=1.6e-11 Score=60.78 Aligned_cols=83 Identities=20% Similarity=0.367 Sum_probs=61.5
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEee-CCEEcCC-CCceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCC-cceEeE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFI-NGRPLPA-SSRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNS-GSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~-~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~-~~~~~~ 77 (90)
..|+.+.|.|.+. +.+ .+.+.|++ ++..+.. ..++.... ......|.+.++...|.|.|.|.+.+.. +.....
T Consensus 15 ~~G~~v~l~C~~~--~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (191)
T 1epf_A 15 SVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (191)
T ss_dssp ETTCCEEEEEEEC--CCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEE
T ss_pred cCCCCEEEEEECC--CCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEE
Confidence 4689999999987 765 78999999 8776653 34444332 2455679999999999999999999987 455555
Q ss_pred EEEEEecCCC
Q psy16902 78 ALLSVQGRRE 87 (90)
Q Consensus 78 ~~l~v~~~~~ 87 (90)
..+.+..+|.
T Consensus 93 ~~l~v~~~p~ 102 (191)
T 1epf_A 93 VNVKIFQKLM 102 (191)
T ss_dssp EEEEEECCSE
T ss_pred EEEEeecCce
Confidence 5666655543
No 118
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.42 E-value=7.9e-12 Score=65.88 Aligned_cols=80 Identities=23% Similarity=0.282 Sum_probs=57.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE--eCCeEEEEEcCCCC-CCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF--KFGFISLDLLSIVL-HDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+... +..... ......|.+..+.. .|.|.|.|.+.|..|.......
T Consensus 19 ~~G~~v~l~C~~~--g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 95 (304)
T 2yd9_A 19 VSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAK 95 (304)
T ss_dssp ETTSCEEEEEEEE--CSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEE
T ss_pred cCCCeEEEEEEEE--EeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEE
Confidence 4689999999997 8999999999999877543 332221 22336799999997 9999999999999888777777
Q ss_pred EEEecC
Q psy16902 80 LSVQGR 85 (90)
Q Consensus 80 l~v~~~ 85 (90)
|.|...
T Consensus 96 l~V~~~ 101 (304)
T 2yd9_A 96 LTVLRE 101 (304)
T ss_dssp EEEECG
T ss_pred EEEecc
Confidence 777654
No 119
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.41 E-value=7e-12 Score=62.32 Aligned_cols=84 Identities=17% Similarity=0.266 Sum_probs=61.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCC-------eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFG-------FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+.+.|.|.+. .+.|.+.+.|++++..+.... +........ ...|.+..+...|.|.|.|.+.+..+.
T Consensus 15 ~~G~~v~l~C~~~-~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 93 (195)
T 2c5d_C 15 ARGLTGTLRCQLQ-VQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQT 93 (195)
T ss_dssp CTTCCEEEEEEEE-EESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred ecCCcEEEecccc-cCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCc
Confidence 4689999999874 257888999999999887652 232222221 357999999999999999999998765
Q ss_pred eEeE-EEEEEecCCC
Q psy16902 74 AEST-ALLSVQGRRE 87 (90)
Q Consensus 74 ~~~~-~~l~v~~~~~ 87 (90)
.... ..|.|..+|.
T Consensus 94 ~~~~~~~l~V~~~p~ 108 (195)
T 2c5d_C 94 FVSQPGYVGLEGLPY 108 (195)
T ss_dssp EECCCEEEEECCSCE
T ss_pred eecccEEEEEecCCe
Confidence 4443 5666655553
No 120
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.41 E-value=1.8e-12 Score=64.01 Aligned_cols=73 Identities=18% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.|.|.+.|++++..+. ... ..|.+..+...|.|.|.|.+.|..+.......|.|
T Consensus 110 ~~g~~~~l~C~~~--~~p~~~v~W~~~~~~~~--------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V 177 (184)
T 2ny1_B 110 LQGQSLTLTLESP--PGSSPSVQCRSPRGKNI--------QGG--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 177 (184)
T ss_dssp ETTCCEEEEEECC--TTCCCEEEEECTTSCEE--------EES--SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCEEEEEEcC--CCCCCEEEEEeCCCccc--------cCc--eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEE
Confidence 4688999999987 78999999998864321 111 25889999999999999999999888888889988
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.|.
T Consensus 178 ~~~p~ 182 (184)
T 2ny1_B 178 LAFQK 182 (184)
T ss_dssp ECCCC
T ss_pred EecCC
Confidence 87765
No 121
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.41 E-value=6.2e-12 Score=59.69 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=55.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec-CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc---
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL-PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS--- 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~--- 73 (90)
.+|+++.|.|.+. +. +.+.|+++. . .+ ....++..........|.|.++...|.|.|.|.+.+..+.
T Consensus 30 ~~G~~v~L~C~~~--~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~ 105 (133)
T 3khq_A 30 KRSSMVKFHCYTN--HS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSANHNV 105 (133)
T ss_dssp CTTCCEEEEEEES--SS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-----
T ss_pred eCCCeEEEEEEeC--CC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCCCcce
Confidence 5699999999986 55 889999872 2 11 2345666655556677999999999999999999887542
Q ss_pred -eEeEEEEEEecCCC
Q psy16902 74 -AESTALLSVQGRRE 87 (90)
Q Consensus 74 -~~~~~~l~v~~~~~ 87 (90)
......|.|.+.|.
T Consensus 106 ~~g~gt~L~V~~~p~ 120 (133)
T 3khq_A 106 TDSCGTELLVLGFST 120 (133)
T ss_dssp --CCCEEEEEC----
T ss_pred eECCCEEEEEEeccc
Confidence 23445677766554
No 122
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.41 E-value=1.1e-11 Score=64.79 Aligned_cols=82 Identities=13% Similarity=0.107 Sum_probs=62.0
Q ss_pred CCCceEEEEEEEccCC-CCCcEEEEeeCCEEcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSMRVDWFINGRPLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.|.|.+. + .|.+.+.|++++..+.......... ......|.+..+...|.|.|.|.+.|..|...+...
T Consensus 199 ~~g~~~~l~C~~~--~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~ 276 (289)
T 3ejj_X 199 IRGEAAQIVCSAT--NAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMN 276 (289)
T ss_dssp CSSSCEEEEEEEE--ESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred EeCCcEEEEEEeC--CCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEE
Confidence 4689999999997 6 7889999999998776532211100 011346899999999999999999999999999988
Q ss_pred EEEecCC
Q psy16902 80 LSVQGRR 86 (90)
Q Consensus 80 l~v~~~~ 86 (90)
|.+...+
T Consensus 277 L~~~~~~ 283 (289)
T 3ejj_X 277 FQVVESH 283 (289)
T ss_dssp EECC---
T ss_pred EEEEecc
Confidence 8876543
No 123
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.41 E-value=8.3e-12 Score=65.98 Aligned_cols=79 Identities=15% Similarity=0.128 Sum_probs=62.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEE----EEeC--------CeEEEEEcCCCCCC-CeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATT----TFKF--------GFISLDLLSIVLHD-SGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~-~g~y~C~~~~ 69 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+........ .... ....|.+..+...| .|.|.|.+.|
T Consensus 222 ~~g~~v~l~C~~~--g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N 299 (315)
T 1itb_B 222 DLGSQIQLICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 299 (315)
T ss_dssp CSSSCEEEEEEEE--ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEEC
T ss_pred eCCCcEEEEEEEe--cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEec
Confidence 4689999999998 999999999999998876432111 1000 12368999999999 9999999999
Q ss_pred CCcceEeEEEEEEe
Q psy16902 70 NSGSAESTALLSVQ 83 (90)
Q Consensus 70 ~~~~~~~~~~l~v~ 83 (90)
..|.......|.+.
T Consensus 300 ~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 300 THGIDAAYIQLIYP 313 (315)
T ss_dssp TTCCEEEEEEEECC
T ss_pred CCCceeEEEEEEec
Confidence 99999888877764
No 124
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.41 E-value=8.6e-13 Score=66.15 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=57.9
Q ss_pred CCCceEEEEEEE-ccCCCCCcEEEEeeCC--EEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARI-EPVGDPSMRVDWFING--RPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~-~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.|.|.+ . +.|.|.+.|++++ ..+...... ......|.+..+...|.|.|.|.+.|..|.......
T Consensus 134 ~~g~~v~l~C~~~~--g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 207 (214)
T 3jz7_A 134 EIGNDFKLKCEPKE--GSLPLQFEWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLR 207 (214)
T ss_dssp BTTCCEEEEEECSB--CCSSCEEEEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred ecCCcEEEEecCCC--CCCCCEEEEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEE
Confidence 468899999998 5 8899999999954 322211110 111226899999999999999999999999888888
Q ss_pred EEEecC
Q psy16902 80 LSVQGR 85 (90)
Q Consensus 80 l~v~~~ 85 (90)
|.|..+
T Consensus 208 l~V~~P 213 (214)
T 3jz7_A 208 LDVVPP 213 (214)
T ss_dssp ECCBCC
T ss_pred EEEeCC
Confidence 877654
No 125
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.40 E-value=7.6e-12 Score=59.42 Aligned_cols=70 Identities=16% Similarity=0.351 Sum_probs=52.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC----------CceEEEE---eCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS----------SRATTTF---KFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
..|+++.|.|.+. +.|.|.+.|++++..+... .+..... ......|.+.++...|.|.|.|.+.|
T Consensus 34 ~~G~~v~L~C~~~--g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 111 (137)
T 3qr2_A 34 WVGGSVELHCEAV--GSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASN 111 (137)
T ss_dssp ETTSCEEEEEEEE--CSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred eCCCCEEEEEEEe--eecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEe
Confidence 4689999999998 9999999999977654321 1222211 11234699999999999999999999
Q ss_pred CCcce
Q psy16902 70 NSGSA 74 (90)
Q Consensus 70 ~~~~~ 74 (90)
..|..
T Consensus 112 ~~G~~ 116 (137)
T 3qr2_A 112 DPDRN 116 (137)
T ss_dssp CTTSS
T ss_pred cCCcc
Confidence 88764
No 126
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.40 E-value=8.6e-12 Score=67.50 Aligned_cols=68 Identities=29% Similarity=0.450 Sum_probs=58.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+.... ..|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 320 ~~g~~~~l~C~~~--g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 320 DFGRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp CTTSCEEEEEEEE--EECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCCCCEEEEEEec--cccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 4689999999998 99999999999998875432 25889999999999999999999998888877765
No 127
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.40 E-value=1.4e-11 Score=67.95 Aligned_cols=81 Identities=12% Similarity=0.242 Sum_probs=58.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.|.+.+.|++++..+......... ......|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 61 ~~G~~v~L~C~v~--g~P~p~i~W~~~~~~l~~~~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 137 (423)
T 3qs7_E 61 DVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSI 137 (423)
T ss_dssp CSSCCEEEEEECS--CCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEE
T ss_pred ecCCcEEEEEEEE--cCCCCeEEEEECCCccCccceeccc-cceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEE
Confidence 5799999999997 8999999999998776543222111 112335899999999999999999999888877777777
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
..+|
T Consensus 138 ~~~p 141 (423)
T 3qs7_E 138 RNTL 141 (423)
T ss_dssp C---
T ss_pred ecCc
Confidence 6433
No 128
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.40 E-value=2.8e-11 Score=60.84 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=59.1
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
+|+++.|.|.+. |.|.|.+.|.+..... .... .........|.|.++...|.|.|.|.+.|..+.......|.|.
T Consensus 15 ~G~~v~L~C~~~--g~P~p~i~W~~~~~~~-~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~ 89 (202)
T 1vca_A 15 IGDSVSLTCSTT--GCESPFFSWRTQIDSP-LNGK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIY 89 (202)
T ss_dssp TTSCEEEEEEEE--SCSSCEEEEEETTCCC-CSSE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEeec--CCCCCeEEEECCCCCC-ccce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEE
Confidence 799999999998 8999999998743111 1111 1122334469999999999999999999998877777788887
Q ss_pred cCCC
Q psy16902 84 GRRE 87 (90)
Q Consensus 84 ~~~~ 87 (90)
.+|.
T Consensus 90 ~~p~ 93 (202)
T 1vca_A 90 SFPK 93 (202)
T ss_dssp BCCS
T ss_pred eCCC
Confidence 6654
No 129
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.40 E-value=6.1e-12 Score=68.18 Aligned_cols=73 Identities=30% Similarity=0.445 Sum_probs=61.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+... ++... .+ .|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 322 ~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~-~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 322 KQGQDVTIPCKVT--GLPAPNVVWSHNAKPLSGG-RATVT--DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CTTSCEEEECEEE--EESCCCCEEEETTEECCSS-SEEEE--TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEC--cccCCeeEEEECCEECCCC-ceEEE--CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 4689999999998 8999999999999987654 44332 22 6899999999999999999999998888777765
No 130
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=72.99 Aligned_cols=76 Identities=24% Similarity=0.392 Sum_probs=59.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC---CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA---SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
.+|+++.+.|.+. |.|.|.+.|++++..+.. ..++...... .+.+..+...|.|.|.|.+.|..|.......
T Consensus 398 ~~G~~v~l~C~~~--g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 472 (477)
T 2id5_A 398 DEGHTVQFVCRAD--GDPPPAILWLSPRKHLVSAKSNGRLTVFPDG---TLEVRYAQVQDNGTYLCIAANAGGNDSMPAH 472 (477)
T ss_dssp ETTCCEEECCCEE--EESCCEEEEECTTSCBC-------CEECTTS---CEEESSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred eCCCeEEEEEecc--ccCCCEEEEEECCccccccCCCceEEeCCCC---EEEEeeCChHHCEEEEEEEEeCCCcEEEEEE
Confidence 4689999999988 999999999999876543 1222222122 4899999999999999999999998888777
Q ss_pred EEEe
Q psy16902 80 LSVQ 83 (90)
Q Consensus 80 l~v~ 83 (90)
+.|.
T Consensus 473 l~V~ 476 (477)
T 2id5_A 473 LHVR 476 (477)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7774
No 131
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.38 E-value=1.1e-12 Score=74.06 Aligned_cols=80 Identities=18% Similarity=0.334 Sum_probs=63.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....+.. .....|.+..+...|.|.|.|.+.|..|.......|.|
T Consensus 339 ~~G~~v~L~C~~~--g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V 412 (527)
T 3qs9_E 339 DQYEEFCFSVRFK--AYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNI 412 (527)
T ss_dssp CTTCCCCEEEEEE--EESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-
T ss_pred cCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4588999999998 99999999999998875543311 11225789999999999999999999998888888888
Q ss_pred ecCCCC
Q psy16902 83 QGRREG 88 (90)
Q Consensus 83 ~~~~~~ 88 (90)
..+|.+
T Consensus 413 ~~~P~i 418 (527)
T 3qs9_E 413 RRKPQV 418 (527)
T ss_dssp -CCCEE
T ss_pred ecCCeE
Confidence 877754
No 132
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.38 E-value=1.1e-11 Score=65.26 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=56.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+....... .....+.+..+ .|.|.|.|.+.|..|.......|.|
T Consensus 218 ~~G~~v~l~C~~~--g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V 289 (304)
T 2yd9_A 218 MPGGNVNITCVAV--GSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITV 289 (304)
T ss_dssp CTTCCEEEEEEEE--EESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-
T ss_pred cCCCeEEEEEEEe--eeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4689999999998 89999999999998876543321 12234555555 5889999999999999988888888
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.+.+.
T Consensus 290 ~~~~~ 294 (304)
T 2yd9_A 290 KSLPK 294 (304)
T ss_dssp -----
T ss_pred ecCcc
Confidence 76654
No 133
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.38 E-value=4.6e-12 Score=64.71 Aligned_cols=80 Identities=30% Similarity=0.484 Sum_probs=61.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+....+. ..........|.+.++...|.|.|.|.+.+..+.......+.
T Consensus 28 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~ 105 (241)
T 3grw_A 28 PAANTVRFRCPAA--GNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD 105 (241)
T ss_dssp ETTSEEEEECCEE--CSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCeEEEEEEec--CCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEE
Confidence 3689999999987 8899999999999887643221 011112223689999999999999999999888877777777
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|..
T Consensus 106 V~~ 108 (241)
T 3grw_A 106 VLE 108 (241)
T ss_dssp EEC
T ss_pred Eec
Confidence 754
No 134
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.38 E-value=2.4e-12 Score=72.19 Aligned_cols=84 Identities=17% Similarity=0.156 Sum_probs=65.9
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEcCCCC-ceEEEEeC----CeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPLPASS-RATTTFKF----GFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|.+. +.|.|. +.|++++..+.... ++...... ....|.+..+...|.|.|.|.+.|..|....
T Consensus 326 ~~G~~v~l~C~~~--g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 403 (524)
T 2ec8_A 326 NDGENVDLIVEYE--AFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAI 403 (524)
T ss_dssp CTTCCEEEEEEEE--EESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cCCCcEEEEEEEe--ecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEE
Confidence 4688999999997 899999 99999998776543 22211111 2356999999999999999999999999888
Q ss_pred EEEEEEecCCCC
Q psy16902 77 TALLSVQGRREG 88 (90)
Q Consensus 77 ~~~l~v~~~~~~ 88 (90)
...|.|..+|.+
T Consensus 404 ~~~l~V~~~P~i 415 (524)
T 2ec8_A 404 AFNVYVNTKPEI 415 (524)
T ss_dssp EEEEEECEEEEE
T ss_pred EEEEEEecCCeE
Confidence 888888766653
No 135
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.37 E-value=7.9e-12 Score=61.85 Aligned_cols=78 Identities=23% Similarity=0.268 Sum_probs=58.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~~l 80 (90)
..|+++.|.|.+. +.|.+.+.|++++..+.. ..++...... ..|.+.++...|.|.|.|.+.+..+. ......+
T Consensus 20 ~~G~~v~l~C~~~--~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l 95 (192)
T 2iep_A 20 LVEEVATFMCAVE--SYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTANNGVGGAVESCGAL 95 (192)
T ss_dssp ETTSCEEEECCEE--EESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEE
T ss_pred eCCCcEEEEeeCC--CCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEE
Confidence 4688999999987 888899999999988764 3444443222 25889999999999999999998766 3333445
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.+..
T Consensus 96 ~v~~ 99 (192)
T 2iep_A 96 QVKM 99 (192)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 136
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.37 E-value=5.2e-11 Score=62.23 Aligned_cols=82 Identities=18% Similarity=0.371 Sum_probs=63.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee-CCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE-eEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI-NGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE-STALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~-~~~~l 80 (90)
..|+.+.|.|.+. +.|. .+.|++ ++..+....++..........|.+.++...|.|.|.|.+.+..+... ....+
T Consensus 17 ~~G~~v~l~C~~~--~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l 93 (291)
T 2wim_A 17 SVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 93 (291)
T ss_dssp ETTCCEEEEEEEE--SCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEE
T ss_pred cCCCcEEEEEEEe--CCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEE
Confidence 4689999999997 7664 899998 67666666666666556566899999999999999999999877653 34466
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.+..++.
T Consensus 94 ~v~~~~~ 100 (291)
T 2wim_A 94 EIYQKLT 100 (291)
T ss_dssp EEECCCB
T ss_pred EecCCcc
Confidence 6665554
No 137
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.37 E-value=2e-12 Score=65.56 Aligned_cols=80 Identities=29% Similarity=0.434 Sum_probs=61.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceE-EEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRAT-TTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+....+.. .........|.+.++...|.|.|.|.+.+..+.......+.
T Consensus 32 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 109 (231)
T 3ojm_B 32 PAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 109 (231)
T ss_dssp ETTSCEEEECCEE--EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCEEEEEecc--cCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEE
Confidence 3689999999987 88999999999998876443221 01112223589999999999999999999988877777777
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|..
T Consensus 110 V~~ 112 (231)
T 3ojm_B 110 VVE 112 (231)
T ss_dssp EEC
T ss_pred EEc
Confidence 765
No 138
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.37 E-value=8e-13 Score=69.71 Aligned_cols=78 Identities=14% Similarity=0.232 Sum_probs=60.7
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. |.|.| .+.|++++..+...... .+...+.+..+...|.|.|.|.+.|..|.......|.
T Consensus 225 ~~g~~v~l~C~~~--g~P~p~~v~W~k~~~~~~~~~~~-----~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~ 297 (308)
T 4fom_A 225 VGRKGVNLKCNAD--ANPPPFKSVWSRLDGQWPDGLLA-----SDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIY 297 (308)
T ss_dssp TTCCSCEEECCEE--EESCEEEEECCBSSSCCCSSCBC-----STTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECC
T ss_pred eccccEEEEEEEe--cCCCCcEEEEEECCeECCCcEEE-----cCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEE
Confidence 3477899999998 88888 69999998766543211 1223456778899999999999999999999988999
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|.++|.
T Consensus 298 V~~~P~ 303 (308)
T 4fom_A 298 ISDPPH 303 (308)
T ss_dssp EECCC-
T ss_pred EEcCCC
Confidence 988875
No 139
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.36 E-value=6.2e-12 Score=63.00 Aligned_cols=80 Identities=23% Similarity=0.331 Sum_probs=56.8
Q ss_pred CCCceEEEEEE-EccCCCCCcEEEEeeCCE-EcCCCCce-------EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEAR-IEPVGDPSMRVDWFINGR-PLPASSRA-------TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~-~~~~~~~~~~~~w~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+.+.|.|. .. +.|.|.+.|++++. .+...... ..........|.+..+...|.|.|.|.+.|..|.
T Consensus 117 ~~g~~~~l~C~~~~--~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 194 (212)
T 1f97_A 117 TIGNRAVLTCSEHD--GSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT 194 (212)
T ss_dssp ETTSCEEEEEECSC--CBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSC
T ss_pred CCCCeEEEEEEccc--CcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCC
Confidence 45889999998 55 88999999999998 76543221 1111122335889999999999999999999887
Q ss_pred e--EeEEEEEEec
Q psy16902 74 A--ESTALLSVQG 84 (90)
Q Consensus 74 ~--~~~~~l~v~~ 84 (90)
. .....|.|.+
T Consensus 195 ~~~s~~~~l~V~~ 207 (212)
T 1f97_A 195 AMRSEAAHMDAVE 207 (212)
T ss_dssp CEECCCEEEEEES
T ss_pred ccccceEEEEEEE
Confidence 7 3444555543
No 140
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=64.95 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=60.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.+.|.+. .+.|.+.+.|++++..+....++..........|.+.++...|.|.|.|.+.|..|...
T Consensus 14 ~eg~~v~l~~~~~-~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~ 85 (312)
T 2y23_A 14 DDDGVISLNFECD-KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS 85 (312)
T ss_dssp CTTCCEEEEEECS-SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE
T ss_pred ecCCeEEEEEEEe-CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE
Confidence 4688889998875 46889999999999998877777776666667899999999999999999999776443
No 141
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.36 E-value=1.4e-11 Score=60.96 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=54.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcC--CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLP--ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+. ...++...... .|.+..+...|.|.|.|.+.|..+.......+
T Consensus 109 ~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~ 183 (189)
T 2v44_A 109 KQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDI 183 (189)
T ss_dssp ETTSCEEECCEEE--CSSCCEEEEEEEC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEEEC--cCCCCcEEEEECCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeeeE
Confidence 3688999999998 99999999999987664 23344333222 58999999999999999999988666555444
Q ss_pred E
Q psy16902 81 S 81 (90)
Q Consensus 81 ~ 81 (90)
.
T Consensus 184 ~ 184 (189)
T 2v44_A 184 I 184 (189)
T ss_dssp E
T ss_pred E
Confidence 3
No 142
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.36 E-value=6e-12 Score=63.43 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=58.5
Q ss_pred CCCceEEEEEEE-ccCCCCCcEEEEeeCCEEcCCC--------CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARI-EPVGDPSMRVDWFINGRPLPAS--------SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+.+.|.|.+ . +.|.+.+.|++++..+... .+.... .. ..|.+..+...|.|.|.|.+.|..|.
T Consensus 121 ~~g~~v~l~C~~~~--g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~ 195 (217)
T 2vr9_A 121 AKGETALLECGPPK--GIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIV-DG--GNLLISNVEPIDEGNYKCIAQNLVGT 195 (217)
T ss_dssp CTTSCEEECCBCCC--EESCCEEEEEETTEEECCCCCC---CCCSEEEE-TT--TEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred cCCCeEEEEEECCC--CCCCCeEEEEECCcCCCcccccccccCCcEEec-CC--CcEEEeeCCHHHCeEEEEEEEcccce
Confidence 468899999987 5 8899999999999887632 222222 11 25899999999999999999999998
Q ss_pred eEeEEEEEEe
Q psy16902 74 AESTALLSVQ 83 (90)
Q Consensus 74 ~~~~~~l~v~ 83 (90)
......+.+.
T Consensus 196 ~~~~~~~lv~ 205 (217)
T 2vr9_A 196 RESSYAKLIV 205 (217)
T ss_dssp EECCCEEEEE
T ss_pred eccccEEEEE
Confidence 7777655554
No 143
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.35 E-value=1.6e-11 Score=61.73 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=57.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEE---c-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRP---L-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~---~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++. +.. + . ...++..........|.|.++...|.|.|.|.+.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 90 (213)
T 3mj8_L 13 ALGQKATITCSGD--KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSW 90 (213)
T ss_dssp ETTSCEEEEEECS--STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred eCCCCEEEEEEcC--CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEec
Confidence 4699999999987 889999999982 111 0 0 2235554445556679999999999999999999
Q ss_pred cCCc---ceEeEEEEEEe
Q psy16902 69 NNSG---SAESTALLSVQ 83 (90)
Q Consensus 69 ~~~~---~~~~~~~l~v~ 83 (90)
+..+ .......|.|.
T Consensus 91 ~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 91 DGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp ETTTTEEEEBCCEEEEEE
T ss_pred cCCcceeEEcCceEEEEe
Confidence 9876 33444566665
No 144
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.34 E-value=2.4e-11 Score=65.81 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=59.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC----CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS----SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.+|+++.|.|.+. | |.|.+.|++++..+... .++.. ..+ .+.+..+...|.|.|.|.+.|..|......
T Consensus 259 ~~G~~~~l~C~~~--g-p~p~i~W~~~~~~~~~~~~~~~r~~~--~~~--~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 331 (361)
T 2xot_A 259 HLGDTLTIRCDTK--Q-QGMTKVWVSPSNEQVLSQGSNGSVSV--RNG--DLFFKKVQVEDGGVYTCYAMGETFNETLSV 331 (361)
T ss_dssp ETTCCEEECCCCS--S-TTCEEEEECTTSCBCCSCCSSSSEEE--ETT--EEEESSCCTTSCEEEEEEEECSSCEEEEEE
T ss_pred cCCCeEEEEeEee--C-CCCeEEEEeCCCeeEeecccCCceEe--ecC--eEEEeecCcccCEEEEEEEecCCCccEEEE
Confidence 4689999999886 7 99999999976543321 24444 222 489999999999999999999999888888
Q ss_pred EEEEecC
Q psy16902 79 LLSVQGR 85 (90)
Q Consensus 79 ~l~v~~~ 85 (90)
.+.|...
T Consensus 332 ~l~V~~~ 338 (361)
T 2xot_A 332 ELKVYNF 338 (361)
T ss_dssp EEEEESS
T ss_pred EEEEEee
Confidence 8888654
No 145
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.34 E-value=1.6e-11 Score=66.61 Aligned_cols=78 Identities=19% Similarity=0.362 Sum_probs=61.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCc-eEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSR-ATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+..... ........ .|.+..+...|.|.|.|.+.|..|.......|.
T Consensus 325 ~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 400 (404)
T 3p3y_A 325 APGEDGRLVCRAN--GNPKPTVQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 400 (404)
T ss_dssp CTTCCEEEECEEE--EESCCEEEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCcEEEEEEcc--ccCCCceEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEE
Confidence 4588999999998 899999999999998754321 11111222 589999999999999999999999988888887
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|.+
T Consensus 401 V~d 403 (404)
T 3p3y_A 401 VLD 403 (404)
T ss_dssp EC-
T ss_pred EEe
Confidence 753
No 146
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.34 E-value=1.2e-11 Score=61.24 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=57.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCC--CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPAS--SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.|.|.+.|++++..+... .++...... .|.+..+...|.|.|.|.+.|..+.......+
T Consensus 113 ~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 187 (191)
T 1epf_A 113 KEGEDAVIVCDVV--SSLPPTIIWKHKGRDVILKKDVRFIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFKDI 187 (191)
T ss_dssp CTTSCEEECCEEE--CSSCCEEEEEETTEEGGGGCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEE
T ss_pred cCCCeEEEEEEEC--CCCCCEEEEEECCEEeeccCCceEEEecCC---eEEECCCChhhCEEEEEEEEEecceeEEEEEE
Confidence 4688999999998 9999999999999887532 233332222 48999999999999999999987655555544
Q ss_pred EE
Q psy16902 81 SV 82 (90)
Q Consensus 81 ~v 82 (90)
.+
T Consensus 188 ~v 189 (191)
T 1epf_A 188 QV 189 (191)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 147
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.34 E-value=1.6e-11 Score=62.14 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=56.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~~l~ 81 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+..... ..+.+..+...|.|.|.|.+.|..|. ......|.
T Consensus 131 ~~G~~v~L~C~~~--g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 199 (218)
T 3k0w_A 131 MPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 199 (218)
T ss_dssp CTTCCEEEECEEE--BSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEE
T ss_pred cCCCcEEEEEEec--ccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEE
Confidence 4588999999997 899999999999988765432 14888999999999999999998776 34445666
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|.+
T Consensus 200 V~~ 202 (218)
T 3k0w_A 200 IDE 202 (218)
T ss_dssp ECC
T ss_pred EeC
Confidence 654
No 148
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.33 E-value=2.2e-10 Score=54.46 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=56.6
Q ss_pred CCCceEEEEEEEccCCCC---CcEEEEeeCCEE--c--C-------------CCCceEEEEe---CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP---SMRVDWFINGRP--L--P-------------ASSRATTTFK---FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~~~~w~~~~~~--~--~-------------~~~~~~~~~~---~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+ .+.+.|++++.. + . ...+..+... .+...|.|.++...|
T Consensus 19 ~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 96 (139)
T 1pko_A 19 LVGDEAELPCRIS--PGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSD 96 (139)
T ss_dssp ETTSCEEEEEEEE--SCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGG
T ss_pred EeCCCEEEeeEcc--CCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHH
Confidence 4689999999986 433 378999987631 1 0 0133333321 134579999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEEecC
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSVQGR 85 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v~~~ 85 (90)
.|.|.|.+.+..+.......|.|.++
T Consensus 97 ~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 97 EGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred CEEEEEEEEcCCCceEEEEEEEEecC
Confidence 99999999998877777778888754
No 149
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.33 E-value=5.1e-11 Score=59.21 Aligned_cols=71 Identities=17% Similarity=0.325 Sum_probs=55.5
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE-eEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE-STALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~-~~~~l 80 (90)
.+|+.+.|.|.+. +.|.| .+.|++++..+...... .....|.+..+. +.|.|.|.+.|..|... ....|
T Consensus 119 ~~g~~~~l~C~~~--g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l 189 (195)
T 2c5d_C 119 AANTPFNLSCQAQ--GPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATI 189 (195)
T ss_dssp CTTCCEEEEEEEE--CSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEE
T ss_pred cCCCEEEEEeECC--CCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEE
Confidence 4588999999998 89999 99999999877654322 223357777776 78999999999998775 56677
Q ss_pred EE
Q psy16902 81 SV 82 (90)
Q Consensus 81 ~v 82 (90)
.|
T Consensus 190 ~V 191 (195)
T 2c5d_C 190 TV 191 (195)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 150
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.33 E-value=1.1e-11 Score=67.25 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=62.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+..... ..... ...|.+..+...|.|.|.|.+.|..|.......+.|
T Consensus 235 ~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~-~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (404)
T 3p3y_A 235 LRGMDLLLECIAS--GVPTPDIAWYKKGGDLPSDKA-KFENF--NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309 (404)
T ss_dssp ETTSCEEEECCBC--CSSCCEEEEEETTBCCCTTTE-EEEGG--GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCEEEEEEEC--CCCCCcEEEEECCEECCCCcc-ccccc--CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 3588999999887 889999999999987765433 22111 225899999999999999999999998887777777
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
..+|
T Consensus 310 ~~~p 313 (404)
T 3p3y_A 310 KAAP 313 (404)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 6554
No 151
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.32 E-value=2.2e-11 Score=61.68 Aligned_cols=82 Identities=22% Similarity=0.368 Sum_probs=61.4
Q ss_pred CCceEEEEEEEccCCCCCcEEEEee----CCEEcCCCCc--eEEEEe-----CCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFI----NGRPLPASSR--ATTTFK-----FGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~----~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.|+.+.|.|.+. +.|.+.+.|++ ++..+..... ...... .....|.+..+...|.|.|.|.+.|..|
T Consensus 132 ~g~~~~l~C~~~--~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 209 (231)
T 3ojm_B 132 VGGDVEFVCKVY--SDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIG 209 (231)
T ss_dssp TTCCEEEECCEE--CSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred eCCcEEEEEEEe--cCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccc
Confidence 588999999987 89999999998 6665543321 111110 1112588999999999999999999999
Q ss_pred ceEeEEEEEEecCCC
Q psy16902 73 SAESTALLSVQGRRE 87 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~ 87 (90)
.......|.|...|.
T Consensus 210 ~~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 210 QANQSAWLTVLPKQQ 224 (231)
T ss_dssp EEEEEEEEEEECCC-
T ss_pred eEeeEEEEEEecCCC
Confidence 988888888876654
No 152
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.32 E-value=1.1e-11 Score=67.18 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=61.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe-EEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES-TAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~~~ 79 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+.... ++..........|.+..+...|.|.|.|.+.|..|.... ...
T Consensus 225 ~~G~~v~l~C~~~--g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~ 302 (395)
T 1bih_A 225 KAGDVTMIYCMYG--SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLK 302 (395)
T ss_dssp ETTSCEEEEEEEE--CSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEE
T ss_pred ECCCcEEEEEEec--cCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEE
Confidence 3588999999997 89999999999998876542 222111112225899999999999999999999887655 667
Q ss_pred EEEecCCC
Q psy16902 80 LSVQGRRE 87 (90)
Q Consensus 80 l~v~~~~~ 87 (90)
|.|..+|.
T Consensus 303 l~V~~~P~ 310 (395)
T 1bih_A 303 LTVVSAPK 310 (395)
T ss_dssp EEEEEEEE
T ss_pred EEEEcCCc
Confidence 76665443
No 153
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.32 E-value=1.3e-11 Score=68.31 Aligned_cols=79 Identities=20% Similarity=0.368 Sum_probs=57.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-EcCCC---CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-PLPAS---SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.+|+++++.|.+ +.|.|.+.|++++. .+... .++...... .+.+.+++..|.|.|.|.+.|..|......
T Consensus 354 ~~G~~v~L~C~~---~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~---~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 427 (440)
T 3zyj_A 354 TEGMAAELKCRA---STSLTSVSWITPNGTVMTHGAYKVRIAVLSDG---TLNFTNVTVQDTGMYTCMVSNSVGNTTASA 427 (440)
T ss_dssp CTTSCCEECCEE---SSTTSEEEEECTTSCEEESSSCCSSEEECTTC---CEEESSCCSTTCEEEEEEEECSSCEEEEEE
T ss_pred ccCceEEEEeec---CCCCCceEEEeCCCceeeccCCCceEEEccCC---eEEEccCChhhCEEEEEEEEcCCCcEEEEE
Confidence 468999999987 56889999998543 32221 233332222 489999999999999999999999999999
Q ss_pred EEEEecCCC
Q psy16902 79 LLSVQGRRE 87 (90)
Q Consensus 79 ~l~v~~~~~ 87 (90)
.+.|.+.+.
T Consensus 428 ~~~v~~~~~ 436 (440)
T 3zyj_A 428 TLNVTGTHH 436 (440)
T ss_dssp EEEEC----
T ss_pred EEEEecccc
Confidence 998876654
No 154
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.31 E-value=1.7e-11 Score=62.01 Aligned_cols=83 Identities=19% Similarity=0.285 Sum_probs=58.3
Q ss_pred CCCceEEEEEEE-ccCCCCCcEEEEee-CCEEcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARI-EPVGDPSMRVDWFI-NGRPLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~-~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
..|+.+.|.|.+ . +.|.+.+.|++ ++..+.......... ......+.+..+...|.|.|.|.+.|..|......
T Consensus 123 ~~G~~~~l~C~~~~--g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 123 RPGNMVTITCSSYQ--GYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp -CCSEEEEEEEEEE--EBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred cCCceEEEEEeccc--ccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 358899999998 5 78999999998 444443322211111 12233467778888999999999999999999988
Q ss_pred EEEEecCCC
Q psy16902 79 LLSVQGRRE 87 (90)
Q Consensus 79 ~l~v~~~~~ 87 (90)
.+.|.++|.
T Consensus 201 ~l~V~~~p~ 209 (222)
T 4i0k_A 201 SVTITGQPL 209 (222)
T ss_dssp EEECCC---
T ss_pred EEEEeCCcc
Confidence 888876653
No 155
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.31 E-value=2.4e-11 Score=59.64 Aligned_cols=76 Identities=11% Similarity=0.050 Sum_probs=57.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~~l~ 81 (90)
.+|+.+.|.|.+. .+.|.+.+.|++++..+.... ....+.+.++...|.|.|.|.+.|..+. ......|.
T Consensus 98 ~~g~~~~l~C~~~-~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~ 168 (176)
T 1f2q_A 98 MEGQPLFLRCHGW-RNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNIT 168 (176)
T ss_dssp ETTSCEEEEEEEG-GGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred eCCCCEEEEEEec-CCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEE
Confidence 4689999999984 156678999999998774321 1225889999999999999999996443 33446788
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|.++|.
T Consensus 169 V~~~p~ 174 (176)
T 1f2q_A 169 VIKAPR 174 (176)
T ss_dssp EECSCC
T ss_pred EecCCC
Confidence 877765
No 156
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.31 E-value=9.3e-12 Score=66.25 Aligned_cols=83 Identities=23% Similarity=0.361 Sum_probs=61.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee----CCEEcCCCCc--eEEEE-------eCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI----NGRPLPASSR--ATTTF-------KFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~----~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
..|+.+.|.|.+. +.|.|.+.|++ ++..+..... ..... ......|.+..+...|.|.|.|.+.|
T Consensus 235 ~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 312 (334)
T 1ry7_B 235 VLGSDVEFHCKVY--SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGN 312 (334)
T ss_dssp ESSCCEEECCCCB--CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEE
T ss_pred eCCCCEEEEEEEe--cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeC
Confidence 3588899999987 89999999999 5655543221 11110 01112589999999999999999999
Q ss_pred CCcceEeEEEEEEecCCC
Q psy16902 70 NSGSAESTALLSVQGRRE 87 (90)
Q Consensus 70 ~~~~~~~~~~l~v~~~~~ 87 (90)
..|.......|.|...+.
T Consensus 313 ~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 313 SIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp SSCCEEEEEEEEEECSCC
T ss_pred CCCeEEEEEEEEEEECCC
Confidence 999999999998876554
No 157
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.31 E-value=1e-10 Score=53.49 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=50.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-----Ec---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-----PL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|+++.. .+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 91 (108)
T 1jhl_L 14 SPGETITINCRAS--KSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQQH 91 (108)
T ss_dssp CTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEEEC
T ss_pred cCCCCEEEEeEEC--CCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEEEEc
Confidence 5699999999997 77888999998531 11 01245544444445679999999999999999998
Q ss_pred cCC
Q psy16902 69 NNS 71 (90)
Q Consensus 69 ~~~ 71 (90)
+..
T Consensus 92 n~~ 94 (108)
T 1jhl_L 92 NEY 94 (108)
T ss_dssp SSS
T ss_pred cCC
Confidence 863
No 158
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.31 E-value=1.2e-11 Score=67.17 Aligned_cols=79 Identities=16% Similarity=0.291 Sum_probs=59.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-EEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-RPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. |.|.|.+.|++++ ..+....+ .. .....|.+.++...|.|.|.|.+.|..|.......+.
T Consensus 218 ~~G~~v~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~--~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 291 (384)
T 3kld_A 218 EKGTTVKLECFAL--GNPVPTILWRRADGKPIARKAR--RH--KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLT 291 (384)
T ss_dssp ETTSCEEEEEEEE--EESCCEEEEEETTCCCCCTTCE--EC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCcEEEEEEEe--ecCCCcEEEEeCCCccccccce--ec--CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEE
Confidence 3588999999998 9999999999854 33333211 11 1223589999999999999999999999888777777
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|..+|.
T Consensus 292 v~~~P~ 297 (384)
T 3kld_A 292 FYAQPN 297 (384)
T ss_dssp EEEEEE
T ss_pred EecCCc
Confidence 765543
No 159
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.31 E-value=2.5e-11 Score=65.96 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=62.3
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
+|+.+.|.|.+. +.|.+.+.|++++..+............ ..+.+..+...|.|.|.|.+.|..+.......+.|.
T Consensus 235 ~g~~~~l~C~~~--~~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 310 (403)
T 3laf_A 235 EGKDAVLECCVS--GYPPPSFTWLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL 310 (403)
T ss_dssp TTSCEEECCEEE--EESCCEEEEEETTEECCCSSSSEEEETT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEcC--CCCCCeEEEEECCeeccCCCceEEECCc--cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE
Confidence 688999999998 8899999999999887654332222222 258899999999999999999998888777777776
Q ss_pred cCC
Q psy16902 84 GRR 86 (90)
Q Consensus 84 ~~~ 86 (90)
.+|
T Consensus 311 ~~p 313 (403)
T 3laf_A 311 VPP 313 (403)
T ss_dssp EEE
T ss_pred CCC
Confidence 544
No 160
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.30 E-value=6e-11 Score=59.68 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=55.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
..|+++.|.|.+. +.|.+.+.|+++. ..+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3d9a_L 14 TPGNSVSLSCRAS--QSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (213)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred eCCCcEEEEEECC--CCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeee
Confidence 5689999999987 8888899999743 111 11245555444555679999999999999999999
Q ss_pred cCCcceEe-EEEEEEe
Q psy16902 69 NNSGSAES-TALLSVQ 83 (90)
Q Consensus 69 ~~~~~~~~-~~~l~v~ 83 (90)
+..+.... ...+.|.
T Consensus 92 ~~~~~~~~~~~~l~V~ 107 (213)
T 3d9a_L 92 NSWPYTFGGGTKLEIK 107 (213)
T ss_dssp SSSSCEECCCEEEEEC
T ss_pred cCCcceeCCCEEEEEe
Confidence 87654322 2245554
No 161
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.30 E-value=5.4e-11 Score=55.25 Aligned_cols=82 Identities=20% Similarity=0.294 Sum_probs=56.1
Q ss_pred CCCceEEEEEEEccCC--CCCcEEEEeeCCEEcCC-------------CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVG--DPSMRVDWFINGRPLPA-------------SSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~--~~~~~~~w~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..|++++|.|.+. + .....+.|+++...+.. ..|+.+. . ...|.|.+++..|.|.|.|.+
T Consensus 16 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~--~-~~sL~I~~v~~~D~G~Y~C~v 90 (117)
T 3q0h_A 16 EKGGSIILQCHLS--STTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPG--P-GLGLTLQSLTVNDTGEYFCIY 90 (117)
T ss_dssp ETTCCEEECEEEE--SCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEEC--S-TTCEEECSCCGGGCEEEEEEE
T ss_pred ecCCCEEEEEEec--CCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeC--C-ceEEEEeeCChhhCEEEEEEE
Confidence 4699999999987 4 23456899987643210 1333331 1 225999999999999999987
Q ss_pred Ec-CCcceEeEEEEEEecCCCCC
Q psy16902 68 TN-NSGSAESTALLSVQGRREGE 89 (90)
Q Consensus 68 ~~-~~~~~~~~~~l~v~~~~~~~ 89 (90)
.. ..+.......|.|..+|.++
T Consensus 91 ~~~~~g~~~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 91 HTYPDGTYTGRIFLEVLESSVAE 113 (117)
T ss_dssp EEETTCCEEEEEEEEEECC----
T ss_pred EECCCCCeEEEEEEEEEccCccc
Confidence 64 55777788899998888654
No 162
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.30 E-value=4.2e-11 Score=60.47 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=54.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC-CEEcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN-GRPLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.|.|.+. |.|.|.+.|+++ +..+.......... ...........+...|.|.|.|.+.|..|.......
T Consensus 129 ~~g~~v~L~C~~~--g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~ 206 (222)
T 3sbw_C 129 PVTSEHELTCQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAE 206 (222)
T ss_dssp TTTTEEEEEEEEE--EBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEE
T ss_pred cCCCcEEEEEEec--CCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEE
Confidence 4588999999997 899999999998 55444322111111 111111122233457889999999999999988888
Q ss_pred EEEecCCC
Q psy16902 80 LSVQGRRE 87 (90)
Q Consensus 80 l~v~~~~~ 87 (90)
+.+.+.|.
T Consensus 207 l~v~~~p~ 214 (222)
T 3sbw_C 207 LVIPELPL 214 (222)
T ss_dssp EECCCC--
T ss_pred EEecCCcc
Confidence 88875543
No 163
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.30 E-value=2.2e-11 Score=60.98 Aligned_cols=80 Identities=26% Similarity=0.385 Sum_probs=58.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+ ....+.... . ..|.+.++...|.|.|.|.+.+.
T Consensus 14 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 14 PENESIKLTCTYS--GFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS--S--SGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp ETTCCEEEECEEE--SCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE--T--TEEEESCCCGGGCEEEEEEEEET
T ss_pred EcCCCEEEEeEeC--CCCCcEEEEEECCCceeeEEecCCcccccccCcEEee--c--eeEEEcccCcccCeEEEEEEEcc
Confidence 4689999999997 8899999999876431 112333322 1 35899999999999999999998
Q ss_pred Cc--ceEeEEEEEEecCCCC
Q psy16902 71 SG--SAESTALLSVQGRREG 88 (90)
Q Consensus 71 ~~--~~~~~~~l~v~~~~~~ 88 (90)
.+ .......|.|..+|.+
T Consensus 88 ~g~~~~~~~~~l~V~~~p~~ 107 (212)
T 1f97_A 88 GGQNYGEVSIHLTVLVPPSK 107 (212)
T ss_dssp TSSSEEEEEEEEEEEBCCCC
T ss_pred CCCcccEEEEEEEEEcCCCC
Confidence 65 4455667777766654
No 164
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.29 E-value=2.4e-13 Score=78.75 Aligned_cols=81 Identities=22% Similarity=0.372 Sum_probs=0.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+....++... .....|.|.++...|.|.|.|.+.|..|.......|.|
T Consensus 679 ~~g~~~~l~C~~~--g~P~p~v~W~k~g~~l~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 754 (772)
T 3v2a_R 679 SIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 754 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eCCCCEEEEEEeC--ccCCCeEEEEECCeECcCCCCeEEc--CCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEE
Confidence 4588999999987 9999999999999887665443332 12346899999999999999999999999999889998
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
.++|.
T Consensus 755 ~~~p~ 759 (772)
T 3v2a_R 755 EGAQE 759 (772)
T ss_dssp -----
T ss_pred ECCCC
Confidence 87765
No 165
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.29 E-value=4.4e-11 Score=55.12 Aligned_cols=83 Identities=18% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCCceEEEEEEEccCCCCCc----EEEEeeCCEE-------------cCCCCceEEEEeC-----CeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM----RVDWFINGRP-------------LPASSRATTTFKF-----GFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~----~~~w~~~~~~-------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 60 (90)
..|+++.|.|.+. .+.+.+ .+.|++++.. .....+..+.... ....|.|.++...|.
T Consensus 13 ~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 91 (118)
T 3udw_C 13 FLGDSVTLPCYLQ-VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDE 91 (118)
T ss_dssp ETTSCEEECCEEE-CCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGC
T ss_pred eeCCcEEEEEEeE-CCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHC
Confidence 4689999999984 144433 4899987421 1112233322110 134699999999999
Q ss_pred eEEEEEEEc-CCcceEeEEEEEEecCC
Q psy16902 61 GEYTVRVTN-NSGSAESTALLSVQGRR 86 (90)
Q Consensus 61 g~y~C~~~~-~~~~~~~~~~l~v~~~~ 86 (90)
|.|.|.+.+ ..+.......|.|.++|
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 92 GNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred eEEEEEEEECCCCCccceEEEEEEeCC
Confidence 999999988 67777777788887654
No 166
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.28 E-value=2.7e-11 Score=62.10 Aligned_cols=67 Identities=13% Similarity=0.260 Sum_probs=49.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce----------------------EEEEeCCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA----------------------TTTFKFGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~ 60 (90)
.+|+.+.|.|.+. +.|.|.+.|++++..+...... ..... ....|.+..+...|.
T Consensus 149 ~~g~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~ 225 (250)
T 2fbo_J 149 DEGNDITMTCPCT--DCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDA 225 (250)
T ss_dssp CTTCCEEECCCEE--SCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGC
T ss_pred cCCCcEEEEEEec--CCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccC
Confidence 3589999999997 8899999999998766432100 00000 113689999999999
Q ss_pred eEEEEEEEcCCc
Q psy16902 61 GEYTVRVTNNSG 72 (90)
Q Consensus 61 g~y~C~~~~~~~ 72 (90)
|.|.|.+.|..|
T Consensus 226 G~Y~C~a~N~~g 237 (250)
T 2fbo_J 226 GRVWCELATGQG 237 (250)
T ss_dssp EEEEEEEESSSS
T ss_pred EEEEEEecCCcc
Confidence 999999999554
No 167
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.28 E-value=3.9e-10 Score=66.16 Aligned_cols=83 Identities=20% Similarity=0.328 Sum_probs=66.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE-----eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF-----KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
.+|+.+.|.|.+. +.|.|.+.|++++..+....++.... ......+.+..+...|.|.|.|.+.|..|.....
T Consensus 442 ~~G~~v~L~C~~~--g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 519 (816)
T 3dmk_A 442 EPGPSVFLKCVAG--GNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHS 519 (816)
T ss_dssp CSSSCEEEEEEEE--CSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEE
T ss_pred cCCCCEEEEEEEe--cCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEE
Confidence 4688999999987 99999999999999887665543321 1123458999999999999999999999988888
Q ss_pred EEEEEecCCC
Q psy16902 78 ALLSVQGRRE 87 (90)
Q Consensus 78 ~~l~v~~~~~ 87 (90)
..+.|..+|.
T Consensus 520 ~~l~V~~~p~ 529 (816)
T 3dmk_A 520 AKLNVYGLPY 529 (816)
T ss_dssp EEEEECSSCE
T ss_pred EEEEEecCCe
Confidence 8888876653
No 168
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.28 E-value=1.3e-10 Score=61.96 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=57.6
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCEEcCCC-CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC--CcceEeE-
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGRPLPAS-SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN--SGSAEST- 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~--~~~~~~~- 77 (90)
..|+.+.|.|.+. +.| .|.+.|++++..+... .++... . ..|.+.++...|.|.|.|.+.|. .+.....
T Consensus 141 ~~G~~v~L~C~~~--g~p~~~~i~W~k~~~~l~~~~~~~~~~--~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~ 214 (329)
T 3oq3_B 141 HDKYGIDLYCGIL--YAKHYNNITWYKNNQELIIDGTKYSQS--G--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVV 214 (329)
T ss_dssp STTTCEEEECCCC--SCCCCCEEEEEETTEECCCSSSSEEEE--T--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEE
T ss_pred eCCCcEEEEeccC--CCCCCceEEEEECCccCCCCCceEecC--C--CEEEEeecChhhCEEEEEEEEecccCCCceeEE
Confidence 4588999999887 888 8999999999987533 333322 2 25899999999999999999986 5433333
Q ss_pred ---EEEEEecCC
Q psy16902 78 ---ALLSVQGRR 86 (90)
Q Consensus 78 ---~~l~v~~~~ 86 (90)
..+.|..++
T Consensus 215 s~~~~l~V~~~~ 226 (329)
T 3oq3_B 215 SRCKILTVIPSQ 226 (329)
T ss_dssp EEEEEEEEECCC
T ss_pred EeeEEEEEECCC
Confidence 456665544
No 169
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.27 E-value=1.8e-10 Score=56.61 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=52.6
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe-EEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES-TALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~~~l 80 (90)
..|+.+.|.|.+. +.|.| .+.|++++..+..... ....+.+.++ .|.|.|.|.+.|..|.... ...|
T Consensus 111 ~~g~~~~l~C~~~--g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l 179 (182)
T 1rhf_A 111 PPNAPFQLSCEAV--GPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATV 179 (182)
T ss_dssp CTTCCEEEEEEEE--CSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEE
T ss_pred cCCCEEEEEeEec--CCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEE
Confidence 4688999999998 99999 9999999987754321 2335777776 4789999999999887653 4555
Q ss_pred EE
Q psy16902 81 SV 82 (90)
Q Consensus 81 ~v 82 (90)
.|
T Consensus 180 ~V 181 (182)
T 1rhf_A 180 HL 181 (182)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 170
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.27 E-value=1e-10 Score=58.78 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=51.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.|.+.+.|+++. . .+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3nl4_L 14 PVGGTVTIKCQAS--QSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQST 91 (213)
T ss_dssp ETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEC
T ss_pred cCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecC
Confidence 4689999999997 8889999999842 1 11 01245555545556679999999999999999999
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 92 ~~~~ 95 (213)
T 3nl4_L 92 YENP 95 (213)
T ss_dssp CSST
T ss_pred CCCc
Confidence 8655
No 171
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.27 E-value=1e-10 Score=58.80 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=50.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC---EE-----------cCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING---RP-----------LPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++.. .. .....++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3r06_A 14 SLGDRVTINCQAS--QDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQY 91 (213)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred cCCCcEEEEEEeC--CCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEecc
Confidence 4699999999997 7788999999732 10 011345555444556679999999999999999998
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 92 ~~~~ 95 (213)
T 3r06_A 92 YNYP 95 (213)
T ss_dssp SSSS
T ss_pred cCCc
Confidence 8643
No 172
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.27 E-value=1.6e-11 Score=65.20 Aligned_cols=76 Identities=16% Similarity=0.291 Sum_probs=60.1
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEcCCCCceEEEEeCCeEEEEEc-CCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPLPASSRATTTFKFGFISLDLL-SIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.|.|. +.|++++..+..... . ... .|.+. .+...|.|.|.|.+.|..|.......|
T Consensus 245 ~~g~~~~l~C~~~--g~p~p~~i~W~~~~~~~~~~~~--~--~~~--~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 316 (331)
T 3u83_A 245 LQRMDVKLTCKAD--ANPPATEYHWTTLNGSLPKGVE--A--QNR--TLFFKGPINYSLAGTYICEATNPIGTRSGQVEV 316 (331)
T ss_dssp TTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTEE--E--ETT--EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eCCCeEEEEEeCc--CCCCCCEEEEEECCCcccccce--e--cCc--EEEEeCCCccccCeEEEEEEEeccccceEEEEE
Confidence 4689999999998 899998 999999887654321 1 122 48888 899999999999999999988888888
Q ss_pred EEecCC
Q psy16902 81 SVQGRR 86 (90)
Q Consensus 81 ~v~~~~ 86 (90)
.|.+.+
T Consensus 317 ~V~~~~ 322 (331)
T 3u83_A 317 NITEAA 322 (331)
T ss_dssp CCBC--
T ss_pred EEeccc
Confidence 776543
No 173
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.27 E-value=1.1e-10 Score=59.11 Aligned_cols=71 Identities=23% Similarity=0.353 Sum_probs=55.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce-EeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA-ESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~-~~~~~l~ 81 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.... ...|.+.++...|.|.|.|.+.+..+.. .....+.
T Consensus 31 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~ 99 (218)
T 3k0w_A 31 LAGQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLD 99 (218)
T ss_dssp ETTSBEEEECEET--TTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEE
T ss_pred eCCCcEEEEeeec--CCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEE
Confidence 4689999999997 88999999999998775532 1258899999999999999999987644 3334555
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|..
T Consensus 100 V~~ 102 (218)
T 3k0w_A 100 VCD 102 (218)
T ss_dssp EEC
T ss_pred EEc
Confidence 544
No 174
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.26 E-value=2.3e-10 Score=58.08 Aligned_cols=77 Identities=14% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCCceEEEEEEEccCCCCCc--EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM--RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+++.|.|.+ +.|.| .+.|++.+..+ .+... ......|.|.++...|.|.|.|.+.+..+.......|
T Consensus 20 ~~G~sv~L~C~a---~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 91 (210)
T 1gsm_A 20 ALGASRQLTCRL---ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 91 (210)
T ss_dssp ETTCCEEEEEEE---CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eCCCCEEEEEEC---CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEEEE
Confidence 468999999987 66666 99999855333 12221 2444579999999999999999999988887778888
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.|..+|.
T Consensus 92 tV~~~P~ 98 (210)
T 1gsm_A 92 LVYAFPN 98 (210)
T ss_dssp EEEBCCS
T ss_pred EEEecCC
Confidence 8887775
No 175
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.26 E-value=5.2e-10 Score=58.47 Aligned_cols=82 Identities=22% Similarity=0.391 Sum_probs=59.6
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEee-CCEEcCCC-CceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFI-NGRPLPAS-SRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~ 77 (90)
..|+.+.|.|.+. +.+ .+.+.|++ ++..+... .++... .......|.+.++...|.|.|.|.+.+..+. ....
T Consensus 15 ~~G~~v~l~C~~~--~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~ 92 (291)
T 1qz1_A 15 SVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (291)
T ss_dssp ETTCCEEEEEEES--SCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred eCCCeEEEEEEeC--CCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEE
Confidence 4689999999987 766 68999998 77666533 344333 2344567999999999999999999998753 3444
Q ss_pred EEEEEecCC
Q psy16902 78 ALLSVQGRR 86 (90)
Q Consensus 78 ~~l~v~~~~ 86 (90)
..+.+..++
T Consensus 93 ~~l~v~~~~ 101 (291)
T 1qz1_A 93 VNVKIFQKL 101 (291)
T ss_dssp EEEEEECCS
T ss_pred EEEEeeccc
Confidence 566665444
No 176
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.26 E-value=4.9e-11 Score=59.47 Aligned_cols=77 Identities=9% Similarity=0.009 Sum_probs=53.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc--ceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG--SAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~--~~~~~~~l 80 (90)
.+|+++.|.|.+. + +.+.+.|++++..+...... .........|.|.++...|.|.|.|.+.|..+ .......|
T Consensus 17 ~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 3p2t_A 17 SWGNSVTIWCQGT--L-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 92 (196)
T ss_dssp ETTCCEEEEEECC--T-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred CCCCcEEEEeeCC--C-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEE
Confidence 4689999999875 5 77899999998765431110 00112345699999999999999999999876 22334455
Q ss_pred EEe
Q psy16902 81 SVQ 83 (90)
Q Consensus 81 ~v~ 83 (90)
.|.
T Consensus 93 ~V~ 95 (196)
T 3p2t_A 93 VMT 95 (196)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 177
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.26 E-value=1.3e-10 Score=66.55 Aligned_cols=68 Identities=21% Similarity=0.354 Sum_probs=57.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+... ..|.+..+...|.|.|.|.+.|..|....+..+.|
T Consensus 572 ~~g~~~~l~C~~~--g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V 638 (642)
T 1e07_A 572 LSGANLNLSCHSA--SNPSPQYSWRINGIPQQHT-----------QVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSI 638 (642)
T ss_pred EcCCcEEEEEEec--cCCCCeEEEEECCEECccC-----------ceEEECcccccCCeEEEEEEEecccCcceeEEEEE
Confidence 4588999999997 9999999999999876542 14788899999999999999999998888877766
Q ss_pred e
Q psy16902 83 Q 83 (90)
Q Consensus 83 ~ 83 (90)
.
T Consensus 639 ~ 639 (642)
T 1e07_A 639 T 639 (642)
T ss_pred E
Confidence 4
No 178
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.26 E-value=6.6e-11 Score=66.41 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEc--CCCCceEEE---EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPL--PASSRATTT---FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.+|+.+.|.|.+. +.|.|. +.|++++..+ ......... .......|.+..+...|.|.|.|.+.|..|....
T Consensus 224 ~~G~~v~L~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 301 (524)
T 2ec8_A 224 REGEEFTVTCTIK--DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANV 301 (524)
T ss_dssp ETTSCEEEEEEEE--ESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEE
T ss_pred EcCCcEEEEEEEe--cCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEE
Confidence 4689999999998 888876 9999998763 221111111 0112346999999999999999999999998888
Q ss_pred EEEEEEecCCCC
Q psy16902 77 TALLSVQGRREG 88 (90)
Q Consensus 77 ~~~l~v~~~~~~ 88 (90)
...|.|..+|.+
T Consensus 302 ~~~l~V~~~p~~ 313 (524)
T 2ec8_A 302 TTTLEVVDKGFI 313 (524)
T ss_dssp EEEEEEESSCEE
T ss_pred EEEEEEeccCce
Confidence 888888766543
No 179
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.25 E-value=1.3e-10 Score=61.38 Aligned_cols=76 Identities=22% Similarity=0.337 Sum_probs=58.9
Q ss_pred CCceEEEEEEEccCC----------CCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVG----------DPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~----------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.|+.+.+.|... + .|.+.+.|++++..+....++..........|.+..+...|.|.|.|.+.|..+.
T Consensus 112 ~g~~~~l~c~~~--~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 189 (317)
T 2y25_A 112 SATDLKIQSTAE--GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG 189 (317)
T ss_dssp CBCCCEEEECSS--EEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred cCCCeEEEeecc--ccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCce
Confidence 455666666543 3 6889999999998887766666655555667999999999999999999998887
Q ss_pred eEeEEEEE
Q psy16902 74 AESTALLS 81 (90)
Q Consensus 74 ~~~~~~l~ 81 (90)
......+.
T Consensus 190 ~~~~~~l~ 197 (317)
T 2y25_A 190 HQKTVDLS 197 (317)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 77666554
No 180
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.25 E-value=5.3e-11 Score=59.93 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=53.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC-CcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN-SGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~-~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. .+.|.+.+.|++++..+.. ... ...|.+.++...|.|.|.|.+.|. .+.......|.
T Consensus 101 ~~G~~v~L~C~~~-~~~p~~~v~W~k~g~~~~~------~~~--~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~ 171 (204)
T 3sgj_C 101 KEEDPIHLRCHSW-KNTALHKVTYLQNGKGRKY------FHH--NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQIT 171 (204)
T ss_dssp ETTCCEEEEEEEG-GGCCCEEEEEEETTEEEEE------EEE--CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred eCCCcEEEEEEec-CCCCCceEEEEECCcEeec------ccC--CceEEECcCCcccCEEEEEEEEeCCCceecCcEEEE
Confidence 4689999999986 1346688999999986422 111 124889999999999999999994 34444455777
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
|.+++
T Consensus 172 V~~~~ 176 (204)
T 3sgj_C 172 ITQGL 176 (204)
T ss_dssp EEC--
T ss_pred EeCcC
Confidence 76544
No 181
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.25 E-value=5.6e-11 Score=58.61 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=55.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcC----------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLP----------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|...+...+.+.+.|++++..+. ...++.+.... .|.|.++...|.|.|.|.+.|..|
T Consensus 9 ~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~n~~g 85 (176)
T 1hng_A 9 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVYSTNG 85 (176)
T ss_dssp ETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEEETTC
T ss_pred EcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEEeCCC
Confidence 46899999994321125677899999986432 22344432222 399999999999999999999888
Q ss_pred ce--EeEEEEEEecC
Q psy16902 73 SA--ESTALLSVQGR 85 (90)
Q Consensus 73 ~~--~~~~~l~v~~~ 85 (90)
.. .....|.|..+
T Consensus 86 ~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 86 TRILNKALDLRILEM 100 (176)
T ss_dssp CEEEEEEEEEEEECC
T ss_pred CEEEEEEEEEEEeCC
Confidence 76 55556666543
No 182
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.25 E-value=2.2e-10 Score=64.94 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=60.1
Q ss_pred CCCceEEEEEEEc--cCCCCCcEEEEeeCCEEcCCCCc------e-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIE--PVGDPSMRVDWFINGRPLPASSR------A-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~--~~~~~~~~~~w~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+.+.|.|.+. +.+.|.+.+.|++++..+..... + ..........|.|.++...|.|.|.|.+.|..|.
T Consensus 455 ~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 534 (585)
T 2ocw_A 455 VLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFY 534 (585)
T ss_pred ecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCc
Confidence 4688999999874 12567889999999976543211 1 1111223357999999999999999999999886
Q ss_pred eEeE-EEEEEecCC
Q psy16902 74 AEST-ALLSVQGRR 86 (90)
Q Consensus 74 ~~~~-~~l~v~~~~ 86 (90)
.... ..|.|.++|
T Consensus 535 ~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 535 GETAAVYVAVEERK 548 (585)
T ss_pred cEEEEEEEEEEeee
Confidence 5544 677777665
No 183
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.25 E-value=7.3e-11 Score=57.93 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=52.3
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~~l 80 (90)
.+|+.+.|.|.+. +.++ +.+.|++++..+... .. ...|.+..+...|.|.|.|.+.|..+. ......|
T Consensus 101 ~~g~~~~l~C~~~--~~~~~~~~~W~k~g~~~~~~------~~--~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l 170 (175)
T 1fnl_A 101 KEEDPIHLRCHSW--KNTALHKVTYLQNGKDRKYF------HH--NSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNI 170 (175)
T ss_dssp ETTCCEEEEEEEC--TTCCCEEEEEEETTEEEEEE------EE--CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred cCCCCEEEEEEcC--CCCCceEEEEEECCeEccCC------CC--CCEEEEcccChhhCeEEEEEEEcCCCCccCccEEE
Confidence 3688999999986 6655 599999999865221 11 124889999999999999999997553 3334466
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.|.+
T Consensus 171 ~V~~ 174 (175)
T 1fnl_A 171 TITQ 174 (175)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 6654
No 184
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.25 E-value=1e-10 Score=58.60 Aligned_cols=84 Identities=23% Similarity=0.404 Sum_probs=60.0
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEee----------------CCEEcCC-----CCceEEEE---eCCeEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFI----------------NGRPLPA-----SSRATTTF---KFGFISLDLLS 54 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~----------------~~~~~~~-----~~~~~~~~---~~~~~~~~~~~ 54 (90)
..|+++.|.|.+. +.+ .+.+.|++ ++..+.. ..+..... ......|.|.+
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~ 90 (214)
T 3jz7_A 13 AKGETAYLPCKFT--LSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTN 90 (214)
T ss_dssp ETTSCEEECCBCC--CCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECS
T ss_pred ecCCCEEEEEEEe--cCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEcc
Confidence 4689999999886 655 46899987 3333321 22333321 11234589999
Q ss_pred CCCCCCeEEEEEEEcCCcceEeEEEEEEecCCCC
Q psy16902 55 IVLHDSGEYTVRVTNNSGSAESTALLSVQGRREG 88 (90)
Q Consensus 55 ~~~~~~g~y~C~~~~~~~~~~~~~~l~v~~~~~~ 88 (90)
+...|.|.|.|.+.+..+.......|.|..+|.+
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 91 LQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG 124 (214)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS
T ss_pred CChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC
Confidence 9999999999999998887877788888877654
No 185
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.25 E-value=1.7e-10 Score=58.01 Aligned_cols=79 Identities=11% Similarity=0.146 Sum_probs=55.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.|.+.+.|+++. ..+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 90 (210)
T 1lk3_L 13 SPGEKLTISCKAS--ESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQS 90 (210)
T ss_dssp CTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred cCCCCEEEEeeCC--CccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEE
Confidence 5699999999987 8888899999842 111 11245544444555679999999999999999999
Q ss_pred cCCcceEe-EEEEEEe
Q psy16902 69 NNSGSAES-TALLSVQ 83 (90)
Q Consensus 69 ~~~~~~~~-~~~l~v~ 83 (90)
+..+.... ...+.|.
T Consensus 91 ~~~~~~~~~~~~l~V~ 106 (210)
T 1lk3_L 91 WNGPLTFGAGTKLELK 106 (210)
T ss_dssp SSSSCEECCCEEEEEC
T ss_pred cCCCceeCCCEEEEEc
Confidence 87653322 2244444
No 186
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.24 E-value=4.2e-11 Score=66.13 Aligned_cols=80 Identities=13% Similarity=0.248 Sum_probs=57.5
Q ss_pred CCCceEEEEEEEccCC-CCCcEEEEeeCCEEcCCCCceEE-EE-----eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSMRVDWFINGRPLPASSRATT-TF-----KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. + .|.|.+.|++++..+........ .. ......|.|..+...|.|.|.|.+.|. ..
T Consensus 240 ~~G~~v~L~C~~~--g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~ 314 (423)
T 3qs7_E 240 KVGEPLWIRCKAV--HVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PS 314 (423)
T ss_dssp ETTSCEEEEEEEE--ESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EE
T ss_pred eCCCeEEEEEEEE--cCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CC
Confidence 4689999999997 7 67799999999887654321111 00 011235999999999999999999987 55
Q ss_pred eEEEEEEecCCC
Q psy16902 76 STALLSVQGRRE 87 (90)
Q Consensus 76 ~~~~l~v~~~~~ 87 (90)
....|.|..+|.
T Consensus 315 ~~~~L~V~~~p~ 326 (423)
T 3qs7_E 315 QSALVTIVEKGF 326 (423)
T ss_dssp EEEEEEEESSCE
T ss_pred ceEEEEEEeCCc
Confidence 566677765543
No 187
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.24 E-value=2.9e-10 Score=56.76 Aligned_cols=67 Identities=3% Similarity=-0.109 Sum_probs=45.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCc-eEE-EEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSR-ATT-TFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|.+. +. .+.+.|++++..+..... ... ........|.|.++...|.|.|.|.+.|..+
T Consensus 113 ~~G~~v~L~C~~~--~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 113 NSGGNVTLQCDSQ--VA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp ETTCCEEEEEECS--SC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CCCCcEEEEEecC--CC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 4689999999986 66 789999999876543211 111 1112235799999999999999999999755
No 188
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.24 E-value=1.5e-11 Score=65.48 Aligned_cols=79 Identities=29% Similarity=0.458 Sum_probs=61.0
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.|+.+.|.|.+. +.|.+.+.|++++..+....+. ..........|.+..+...|.|.|.|.+.|..+.......+.|
T Consensus 137 ~g~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 214 (334)
T 1ry7_B 137 AANTVRFRCPAA--GNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDV 214 (334)
T ss_dssp TTCCEEEECCCC--CSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEE
T ss_pred CCCcEEEEEEcc--CCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEE
Confidence 588999999887 8899999999999876544322 1111122336899999999999999999999888877777877
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
..
T Consensus 215 ~~ 216 (334)
T 1ry7_B 215 LE 216 (334)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 189
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=60.92 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=54.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..+..+.+.|.+. +.|.|.+.|++++..+.......... ....+.|.+......|.|.|.|.+.|..|.......+.
T Consensus 131 ~~~~~~~~~c~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 131 GQGLTLAASCTAE--GSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp TCCSEEEEEEEEE--EBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred eeccccceeeecc--CCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 3577899999987 99999999999976543221111000 01123588999999999999999999988666555444
Q ss_pred E
Q psy16902 82 V 82 (90)
Q Consensus 82 v 82 (90)
+
T Consensus 209 v 209 (218)
T 4frw_A 209 L 209 (218)
T ss_dssp C
T ss_pred E
Confidence 3
No 190
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.24 E-value=1.1e-10 Score=60.41 Aligned_cols=80 Identities=14% Similarity=0.130 Sum_probs=54.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--CCEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--NGRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++ ++..+. ...++..........|.|.++...|.|.|.|.+.
T Consensus 152 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 229 (257)
T 1f3r_B 152 SVGDRVTLSCKGS--QNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQY 229 (257)
T ss_dssp CTTCCEEEEEECS--SCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEE
T ss_pred cCCCCEEEEEEEC--CcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEe
Confidence 5689999999987 88888999998 443220 1234444333445579999999999999999999
Q ss_pred cCCcceEeEEEEEEec
Q psy16902 69 NNSGSAESTALLSVQG 84 (90)
Q Consensus 69 ~~~~~~~~~~~l~v~~ 84 (90)
|..........|.|.+
T Consensus 230 n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 230 NNGYTFGAGTKLELKA 245 (257)
T ss_dssp SSSEEECCCCEECCSS
T ss_pred CCCCeECCCEEEEEeC
Confidence 8642222223555543
No 191
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.24 E-value=2.4e-11 Score=60.76 Aligned_cols=78 Identities=14% Similarity=0.184 Sum_probs=55.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. |.|.|.+.|++++..+.. ............+.+..+...|.|.|.|.+.|..|.......+.+
T Consensus 116 ~~g~~v~l~C~~~--g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 116 PGTGEVQLTCQAR--GYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp TTTCCEEEEEEEE--EBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred CCCCeEEEEEEcc--ccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 4688999999997 899999999987653311 111111122334556677788999999999999998888877766
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 192 ~~ 193 (202)
T 3bp6_B 192 LS 193 (202)
T ss_dssp --
T ss_pred cC
Confidence 54
No 192
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.23 E-value=4.3e-11 Score=60.81 Aligned_cols=81 Identities=16% Similarity=0.171 Sum_probs=50.8
Q ss_pred CCCceEEEEEEEccCC-CCCcEEEEeeCCEE-cCCCCceEEEE-eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSMRVDWFINGRP-LPASSRATTTF-KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.+.|.+. + .|.|.+.|++++.. +.......... ......+.+..+...|.|.|.|.+.|..+...+...
T Consensus 131 ~~g~~v~l~c~~~--g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 131 YKDGGIHLECRST--GWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp EETTEEEEEEEEE--EEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred ccCCceeeEEEec--cCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 3578899999887 6 59999999986543 33221111111 111222334456678999999999999999888888
Q ss_pred EEEecC
Q psy16902 80 LSVQGR 85 (90)
Q Consensus 80 l~v~~~ 85 (90)
|.|.++
T Consensus 209 v~v~ep 214 (226)
T 4f80_A 209 ISIADP 214 (226)
T ss_dssp ECCCTT
T ss_pred EEECCC
Confidence 877653
No 193
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.23 E-value=1.4e-10 Score=58.52 Aligned_cols=79 Identities=10% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCC---E-------------EcC--CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFING---R-------------PLP--ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~---~-------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|.+. +. +.+.+.|++.. . ... ...++..........|.|.++...|.|.|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 90 (218)
T 3s96_B 13 SLGASAKLTCTLN--SQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIY 90 (218)
T ss_dssp ETTSCEEEEEEEC--GGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCCcEEEEEECC--CCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEEE
Confidence 4699999999997 77 88999999832 1 000 11344444445556799999999999999
Q ss_pred EEEEEcCCc-----ceEeEEEEEEe
Q psy16902 64 TVRVTNNSG-----SAESTALLSVQ 83 (90)
Q Consensus 64 ~C~~~~~~~-----~~~~~~~l~v~ 83 (90)
.|.+.+..+ .......|.|.
T Consensus 91 ~C~~~~~~~~~~~~~~~~~~~l~V~ 115 (218)
T 3s96_B 91 ICGVGDTIKEQFVYVFGGGTKVTVL 115 (218)
T ss_dssp EEEEEEEETTEEEEEECCCEEEEEE
T ss_pred EEEEecCCCCceeEEEcCcEEEEEe
Confidence 999988764 22333456665
No 194
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.22 E-value=4.2e-10 Score=52.46 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=54.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. +.+.+.+.|++.. . .+ . ...++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 91 (120)
T 1mqk_L 14 SVGETVTITCRAS--ENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHH 91 (120)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred cCCCcEEEEEEeC--CCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEEEEE
Confidence 5699999999987 7777889999853 1 11 0 1245555444455679999999999999999998
Q ss_pred cCC-c-ceEeEEEEEEe
Q psy16902 69 NNS-G-SAESTALLSVQ 83 (90)
Q Consensus 69 ~~~-~-~~~~~~~l~v~ 83 (90)
+.. . .......|.|.
T Consensus 92 ~~~~~~~fg~gt~L~V~ 108 (120)
T 1mqk_L 92 YGTPPLTFGGGTKLEIK 108 (120)
T ss_dssp SSSSSCCBCCCEEEEEC
T ss_pred eCCCceEECCCeEEEEe
Confidence 753 1 22233455554
No 195
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.22 E-value=1.5e-10 Score=58.16 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=54.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+ . +.+.+.|+++ +..+. ...++..........|.|.++...|.|.|.|.+.
T Consensus 13 ~~G~~v~L~C~~---~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 88 (211)
T 3tv3_L 13 SPGQSITISCTG---T-SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSL 88 (211)
T ss_dssp CTTCEEEEEEEC---C-CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred cCCCCEEEEEEE---C-CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEe
Confidence 469999999986 4 8889999984 21110 2235554445556679999999999999999999
Q ss_pred cCCc--ceEeEEEEEEe
Q psy16902 69 NNSG--SAESTALLSVQ 83 (90)
Q Consensus 69 ~~~~--~~~~~~~l~v~ 83 (90)
+..+ .......+.|.
T Consensus 89 ~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 89 VGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp ETTTEEEECCCEEEEEC
T ss_pred cCCCceeECCCceEEEe
Confidence 9876 33344566665
No 196
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.22 E-value=3.5e-11 Score=66.77 Aligned_cols=78 Identities=26% Similarity=0.432 Sum_probs=56.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-EEcCCC---CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-RPLPAS---SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.+|+++++.|.+ . |.|.+.|++++ ..+... .++.....+ .+.+..+...|.|.|.|.+.|..|......
T Consensus 365 ~~G~~~~l~C~~---~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g---~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~ 437 (452)
T 3zyi_A 365 SEGRMAELKCRT---P-PMSSVKWLLPNGTVLSHASRHPRISVLNDG---TLNFSHVLLSDTGVYTCMVTNVAGNSNASA 437 (452)
T ss_dssp CTTSCCEECCBC---C-TTSEEEEECTTSCEECSSCCCSSCEECTTS---CEECSSCCTTCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCEEEEEEeC---C-CCCcEEEEeCCCcEeccCCCCCCEEECCCC---eEEEeecCHHHCEEEEEEEEcCCCcEEEEE
Confidence 568999999975 4 99999999854 333322 233332222 489999999999999999999999999998
Q ss_pred EEEEecCCC
Q psy16902 79 LLSVQGRRE 87 (90)
Q Consensus 79 ~l~v~~~~~ 87 (90)
.+.|.+.+.
T Consensus 438 ~l~v~~~~~ 446 (452)
T 3zyi_A 438 YLNVSTAGT 446 (452)
T ss_dssp EEEC-----
T ss_pred EEEEEcccc
Confidence 888875543
No 197
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.21 E-value=4.7e-11 Score=60.17 Aligned_cols=79 Identities=25% Similarity=0.475 Sum_probs=54.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeE--EEEEcCCCCCCCeEEEEEEEcCCcceEe-E
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFI--SLDLLSIVLHDSGEYTVRVTNNSGSAES-T 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~ 77 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.... ........+.. .+.+.++...|.|.|.|.+.+..+.... .
T Consensus 22 ~~G~~v~L~C~~~--g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~ 99 (217)
T 2vr9_A 22 KKNEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRH 99 (217)
T ss_dssp CTTSCEEECCEEE--CSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCC
T ss_pred eCCCcEEEEEEcC--CCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCcccccc
Confidence 4689999999997 88999999999998876532 11222111111 1256778889999999999998775432 3
Q ss_pred EEEEEe
Q psy16902 78 ALLSVQ 83 (90)
Q Consensus 78 ~~l~v~ 83 (90)
..+.+.
T Consensus 100 ~~l~v~ 105 (217)
T 2vr9_A 100 ASLQIA 105 (217)
T ss_dssp EEEEEC
T ss_pred ceEEEE
Confidence 344443
No 198
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.21 E-value=6.5e-10 Score=50.89 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=49.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RPL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. +.+.+.+.|++.. ..+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 16 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 93 (109)
T 2q20_A 16 SVGDRVTITCQAS--QDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQY 93 (109)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred cCCCcEEEEEeec--cCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEEEEe
Confidence 5699999999987 7777889999753 111 01245555444455679999999999999999988
Q ss_pred cC
Q psy16902 69 NN 70 (90)
Q Consensus 69 ~~ 70 (90)
+.
T Consensus 94 ~~ 95 (109)
T 2q20_A 94 DN 95 (109)
T ss_dssp SS
T ss_pred eC
Confidence 74
No 199
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.21 E-value=5.3e-10 Score=59.67 Aligned_cols=78 Identities=12% Similarity=-0.009 Sum_probs=58.7
Q ss_pred CCCceEEEEEEEccCCCC---Cc-EEEEeeCCEEc-CCCCceEEE--EeC--CeEEEEEcCCCCCCCe-EEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDP---SM-RVDWFINGRPL-PASSRATTT--FKF--GFISLDLLSIVLHDSG-EYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~-~~~w~~~~~~~-~~~~~~~~~--~~~--~~~~~~~~~~~~~~~g-~y~C~~~~~~~ 72 (90)
..|+.+.|.|.+. +.| .+ .+.|++++..+ ......... ... ....|.+..+...|.| .|.|.+.|..|
T Consensus 241 ~~G~~~~l~C~~~--g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G 318 (329)
T 3oq3_B 241 TIGEPANITCTAV--STSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYF 318 (329)
T ss_dssp CTTSCEEEEEEEE--ETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSC
T ss_pred ecCCCEEEEEEEE--ECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCC
Confidence 4688999999998 777 67 88999998764 333322111 111 2346999999999999 99999999999
Q ss_pred ceEeEEEEEE
Q psy16902 73 SAESTALLSV 82 (90)
Q Consensus 73 ~~~~~~~l~v 82 (90)
.......|.+
T Consensus 319 ~~~~~~~l~v 328 (329)
T 3oq3_B 319 DKTLTTTVVL 328 (329)
T ss_dssp EEEEEEEEEE
T ss_pred ceEEEEEEEe
Confidence 8888777665
No 200
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.21 E-value=1.3e-10 Score=62.66 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=59.0
Q ss_pred CCCceEEEEEEEccCC-----CCCcEEEEeeCCEEcCC--------CCceEEEE----------eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVG-----DPSMRVDWFINGRPLPA--------SSRATTTF----------KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-----~~~~~~~w~~~~~~~~~--------~~~~~~~~----------~~~~~~~~~~~~~~~~ 59 (90)
.+|+.+.|.|.+. + .|.|.+.|++++..+.. ..++.... ......|.+.++...|
T Consensus 189 ~~G~~v~l~C~~~--~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 266 (363)
T 1wio_A 189 KEGEQVEFSFPLA--FTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQY 266 (363)
T ss_dssp ETBCCEEEECCCC--CCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGG
T ss_pred ecCCEEEEEEEEe--cccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCc
Confidence 3589999999876 5 67889999999877654 33333321 1112368999999999
Q ss_pred CeEEEEEEEcC--CcceEeEEEEEEe
Q psy16902 60 SGEYTVRVTNN--SGSAESTALLSVQ 83 (90)
Q Consensus 60 ~g~y~C~~~~~--~~~~~~~~~l~v~ 83 (90)
.|.|.|.+.|. .|.......|.|.
T Consensus 267 ~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 267 AGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp CEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred CcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 99999999999 8877777766664
No 201
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.21 E-value=1.2e-10 Score=56.69 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=48.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+.+.|.|.+. .+.|.+.+.|++++..+... .....+.+..+...|.|.|.|.+.|..|.
T Consensus 98 ~~g~~~~l~C~~~-~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 98 QEGETIMLRCHSW-KDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp CTTCCEEEEEEEG-GGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ecCCeEEEEEECC-CCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 4688999999984 15566899999998764321 11235889999999999999999998875
No 202
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.20 E-value=3.8e-10 Score=55.62 Aligned_cols=67 Identities=18% Similarity=0.308 Sum_probs=47.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC--CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA--SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.. ..++...... .+.+..+...|.|.|.|.+.+..+..
T Consensus 15 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~~~~~~ 83 (189)
T 2v5t_A 15 KQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGE 83 (189)
T ss_dssp ETTSCEEECCEEE--CSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTE
T ss_pred eCCCcEEEEEEEc--CCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEEcCCCc
Confidence 4689999999997 889999999999876653 2333332222 48999999999999999999876443
No 203
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.19 E-value=4.4e-10 Score=51.37 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=48.2
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFING-----RPL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..+|++++|.|.+. +.+.+.+.|++.. ..+ . ...++..........|.|.++...|.|.|.|.+
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (108)
T 1qfw_M 13 MSVGERVTLSCKAS--ETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHCGQ 90 (108)
T ss_dssp CCTTCCEEEEEEES--SCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEEEE
T ss_pred EcCCCCEEEEeeeC--CCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEEEE
Confidence 35799999999987 6667889999753 111 1 123444333334557999999999999999999
Q ss_pred EcC
Q psy16902 68 TNN 70 (90)
Q Consensus 68 ~~~ 70 (90)
.+.
T Consensus 91 ~~~ 93 (108)
T 1qfw_M 91 TYN 93 (108)
T ss_dssp CSS
T ss_pred ccC
Confidence 875
No 204
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.19 E-value=4.1e-10 Score=57.37 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=50.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E-----------E-cCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R-----------P-LPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++.. . . .....++..........|.|.++...|.|.|.|.+.
T Consensus 37 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 114 (237)
T 3sob_L 37 SVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQS 114 (237)
T ss_dssp ETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred eCCCcEEEEEecC--CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeec
Confidence 4689999999997 7788999999842 1 0 111245555444556679999999999999999998
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 115 ~~~~ 118 (237)
T 3sob_L 115 YTTP 118 (237)
T ss_dssp SSSS
T ss_pred cCCc
Confidence 7654
No 205
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.19 E-value=1.5e-10 Score=58.25 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+++.|.|.+. +.|.+. +.|++++..+.... ..|.+.++...|.|.|.|.+.+... .....|.
T Consensus 20 ~~G~~v~L~C~~~--~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~~~--s~~~~l~ 85 (204)
T 3sgj_C 20 LEKDSVTLKCQGA--YSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLSTL--SDPVQLE 85 (204)
T ss_dssp ETTCCEEEEEECC--SSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTSBC--CCCEEEE
T ss_pred ECCCCEEEEEcCC--CCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCCcc--cccEEEE
Confidence 4699999999987 777765 99999998775532 2588999999999999999987533 3334555
Q ss_pred Eec
Q psy16902 82 VQG 84 (90)
Q Consensus 82 v~~ 84 (90)
|..
T Consensus 86 V~~ 88 (204)
T 3sgj_C 86 VHI 88 (204)
T ss_dssp EEC
T ss_pred Eec
Confidence 543
No 206
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.19 E-value=7.3e-12 Score=62.60 Aligned_cols=71 Identities=18% Similarity=0.367 Sum_probs=52.8
Q ss_pred CCCceEEEEEEE-ccCCCCCcEEEEeeCCEEcCCCCce-------EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARI-EPVGDPSMRVDWFINGRPLPASSRA-------TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+ . +.|.|.+.|++++..+...... ..........|.+..+...|.|.|.|.+.|..|..
T Consensus 120 ~~g~~~~l~C~~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 120 TIGNRAVLTCSEQD--GSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp ETTSCEEECCCCCS--CBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred ecCCEEEEEEeCCC--CCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 358899999986 5 8899999999998876543221 00111122358899999999999999999998876
Q ss_pred E
Q psy16902 75 E 75 (90)
Q Consensus 75 ~ 75 (90)
.
T Consensus 198 ~ 198 (209)
T 1nbq_A 198 M 198 (209)
T ss_dssp E
T ss_pred c
Confidence 3
No 207
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.19 E-value=1.1e-09 Score=50.02 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=49.6
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..+|++++|.|.+. +.+.+.+.|++.. . .+ . ...++..........|.|.++...|.|.|.|.+
T Consensus 13 ~~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (107)
T 1i8k_A 13 VATGEKVTIRCMTS--TDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQ 90 (107)
T ss_dssp CCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred ecCCCCEEEEEEEC--CCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEE
Confidence 35799999999987 6677889999753 1 11 0 124555544445567999999999999999998
Q ss_pred EcC
Q psy16902 68 TNN 70 (90)
Q Consensus 68 ~~~ 70 (90)
.+.
T Consensus 91 ~~~ 93 (107)
T 1i8k_A 91 SFN 93 (107)
T ss_dssp CSS
T ss_pred eeC
Confidence 875
No 208
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.19 E-value=1.7e-10 Score=52.90 Aligned_cols=61 Identities=8% Similarity=0.097 Sum_probs=42.9
Q ss_pred CCCCceEEEEEEEccCCCCCc-----EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 2 DPQKRKIHFEARIEPVGDPSM-----RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
..+|++++|.|... +.+.. .+.|++++..+.. . .....+.|..+...|.|.|.|.+.+..+
T Consensus 19 v~~G~~VtL~C~~~--~~~~~~~~~~~~~w~k~g~~l~~------~--~~~~~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 19 PQAGSPMTLSCQTK--LPLQRSAARLLFSFYKDGRIVQS------R--GLSSEFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp CBTTCCEEEEEEC-----------CCEEEEEETTEEEEE------E--ESCCEEEESSCCGGGCEEEEEEEECTTS
T ss_pred CCCCCcEEEEEccc--CCCCCcCcceEEEEEECCcCccC------C--CcccEEEeCccCcccCeEEEEEEEeCCC
Confidence 45799999999875 44433 4899999976531 1 1123588999999999999999998654
No 209
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.18 E-value=6.4e-11 Score=59.17 Aligned_cols=80 Identities=23% Similarity=0.316 Sum_probs=56.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+ ....+.... . ..|.+.++...|.|.|.|.+.+.
T Consensus 17 ~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 17 PENNPVKLSCAYS--GFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL--P--TGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp ETTCCCEEECEEE--SCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE--T--TEEECSCCCTTSCSEEEEEEEET
T ss_pred EcCCCEEEEEEEe--CCCCcEEEEEEcCCceeEEEEecCccCccccCceEee--c--cEEEEeeCCHHHCcEEEEEEecC
Confidence 4689999999997 8899999999876431 112233322 1 35899999999999999999987
Q ss_pred Cc--ceEeEEEEEEecCCCC
Q psy16902 71 SG--SAESTALLSVQGRREG 88 (90)
Q Consensus 71 ~~--~~~~~~~l~v~~~~~~ 88 (90)
.+ .......+.|..+|.+
T Consensus 91 ~g~~~~~~~~~l~V~~~p~~ 110 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVLVPPSK 110 (209)
T ss_dssp TSSCEECCEEECCEEBCCCC
T ss_pred CCCccceEEEEEEEecCCcC
Confidence 54 3334456666665543
No 210
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.18 E-value=8.7e-10 Score=62.57 Aligned_cols=84 Identities=18% Similarity=0.157 Sum_probs=60.6
Q ss_pred CCCceEEEEEEEccCCCCCc---EEEEeeCCEEcC--------------CCCceEEEE--eCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM---RVDWFINGRPLP--------------ASSRATTTF--KFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~---~~~w~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+.+.|.|.+. +.+.+ .+.|++++.... ...++.+.. ..+...|.|.++...|.|.|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y 90 (585)
T 2ocw_A 13 VEGNSVSITCYYP--PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRY 90 (585)
T ss_pred ecCCcEEEEEeCC--CCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEE
Confidence 4689999999987 66543 789999875221 112333332 23345689999999999999
Q ss_pred EEEEEcCCcceEeEEEEEEecCCCC
Q psy16902 64 TVRVTNNSGSAESTALLSVQGRREG 88 (90)
Q Consensus 64 ~C~~~~~~~~~~~~~~l~v~~~~~~ 88 (90)
.|.+.+..+.......|.|..+|.+
T Consensus 91 ~C~~~n~~~~~~~~~~l~V~~~p~~ 115 (585)
T 2ocw_A 91 KCGLGINSRGLSFDVSLEVSQGPGL 115 (585)
T ss_pred EEEcccCCCCceEEEEEEEecCccc
Confidence 9999988877777778888776654
No 211
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.18 E-value=1e-10 Score=58.38 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=53.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce--EeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA--ESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~--~~~~~l 80 (90)
.+|+++.|.|.+. +.+. .+.|++++..+...... .........|.|.++...|.|.|.|.+.|..+.. .....|
T Consensus 17 ~~G~~v~L~C~~~--~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 2d3v_A 17 SRGNSVTIRCQGT--LEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLEL 92 (196)
T ss_dssp ETTCCEEEEEECC--TTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEE
T ss_pred cCCCeEEEEEeCC--CCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEE
Confidence 4699999999876 6654 89999998765321100 0012334568999999999999999998876532 233455
Q ss_pred EEec
Q psy16902 81 SVQG 84 (90)
Q Consensus 81 ~v~~ 84 (90)
.|..
T Consensus 93 ~V~~ 96 (196)
T 2d3v_A 93 VVTG 96 (196)
T ss_dssp EEEC
T ss_pred EecC
Confidence 5554
No 212
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.17 E-value=2.6e-10 Score=52.93 Aligned_cols=80 Identities=20% Similarity=0.351 Sum_probs=54.7
Q ss_pred CCCceEEEEEEEccCCCCC----cEEEEeeCC-------EEc--------------CCCCceEEEEe---CCeEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPS----MRVDWFING-------RPL--------------PASSRATTTFK---FGFISLDLLS 54 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~----~~~~w~~~~-------~~~--------------~~~~~~~~~~~---~~~~~~~~~~ 54 (90)
..|+++.|.|.+. +.+. +.+.|++++ ..+ ....+...... .....|.|.+
T Consensus 18 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 95 (126)
T 1eaj_A 18 AKGETAYLPCKFT--LSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTN 95 (126)
T ss_dssp ETTSCEEECCBEE--CCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECS
T ss_pred EeCCCEEEEEEEe--cCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECc
Confidence 4689999999886 4443 458998764 211 01123333221 1124599999
Q ss_pred CCCCCCeEEEEEEEcCCcceEeEEEEEEec
Q psy16902 55 IVLHDSGEYTVRVTNNSGSAESTALLSVQG 84 (90)
Q Consensus 55 ~~~~~~g~y~C~~~~~~~~~~~~~~l~v~~ 84 (90)
+...|.|.|.|.+.+..+.......|.|..
T Consensus 96 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 96 LQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 999999999999999887777777777754
No 213
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.17 E-value=2e-11 Score=60.24 Aligned_cols=62 Identities=3% Similarity=0.079 Sum_probs=47.0
Q ss_pred ceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 6 RKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 6 ~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.++.|.|.+. +.|.|.+.|++++..+....+ +.+..+...|.|.|.|.+.|..|.......|
T Consensus 111 ~~v~L~C~~~--g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 111 SNATLTCEVL--EGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp TTTEEEEECS--SCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEec--CCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 3578999887 899999999999987654332 2223556889999999999998877665543
No 214
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.17 E-value=7.3e-11 Score=63.82 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=59.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
..|+.+.|.|.+. +.|.+.+.|++++..+.... ......+.+..+...|.|.|.|.+.|..|.......+.|
T Consensus 220 ~~G~~v~l~C~~~--g~p~~~i~W~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 291 (382)
T 1cs6_A 220 LTGQMVTLECFAF--GNPVPQIKWRKLDGSQTSKW------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII 291 (382)
T ss_dssp ETTCCEEEECEEE--EESCCEEEEEECCSCCSCCC------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEc--cCCCCEEEEEECCcccccEE------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEE
Confidence 3588999999987 88999999999876543311 111235889999999999999999999888777777777
Q ss_pred ecCCC
Q psy16902 83 QGRRE 87 (90)
Q Consensus 83 ~~~~~ 87 (90)
..+|.
T Consensus 292 ~~~p~ 296 (382)
T 1cs6_A 292 HAQPD 296 (382)
T ss_dssp EEEEE
T ss_pred ecCCC
Confidence 65543
No 215
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.17 E-value=6.3e-10 Score=52.23 Aligned_cols=77 Identities=18% Similarity=0.278 Sum_probs=52.9
Q ss_pred CCceEEEEEEEccCCCCC---cEEEEeeCCEE-----------cCC------CCceEEEEe---CCeEEEEEcCCCCCCC
Q psy16902 4 QKRKIHFEARIEPVGDPS---MRVDWFINGRP-----------LPA------SSRATTTFK---FGFISLDLLSIVLHDS 60 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~-----------~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~ 60 (90)
.|++++|.|.+. ..+. ..+.|++++.. ... ..|..+... .+..+|.|.+++..|.
T Consensus 19 vG~~v~L~C~~~--~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~ 96 (125)
T 4gos_A 19 IGEDGILSCTFE--PDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA 96 (125)
T ss_dssp TTSCEEEEEEEC--CCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGC
T ss_pred CCCCEEEEEEEc--CCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHC
Confidence 589999999986 3322 46899986421 110 122222211 1234699999999999
Q ss_pred eEEEEEEEcCCcceEeEEEEEE
Q psy16902 61 GEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 61 g~y~C~~~~~~~~~~~~~~l~v 82 (90)
|.|.|.+.+..+.......|.|
T Consensus 97 G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 97 GTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCeEEEEEEEEE
Confidence 9999999999888888777776
No 216
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.17 E-value=7.7e-10 Score=57.05 Aligned_cols=68 Identities=10% Similarity=0.094 Sum_probs=50.5
Q ss_pred CCCceEEEEEEEccCCCC-----CcEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-----SMRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. ..+ ....++..........|.|.++...|.|.|
T Consensus 51 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 128 (254)
T 2c1o_A 51 TIGQPASISCKSS--QSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIY 128 (254)
T ss_dssp CTTSCEEEEEEES--SCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE
T ss_pred cCCCcEEEEeecc--CcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEE
Confidence 4699999999987 776 4889999743 211 112455554455566799999999999999
Q ss_pred EEEEEcCCc
Q psy16902 64 TVRVTNNSG 72 (90)
Q Consensus 64 ~C~~~~~~~ 72 (90)
.|.+.+..+
T Consensus 129 ~C~a~n~~~ 137 (254)
T 2c1o_A 129 YCVQGSHFP 137 (254)
T ss_dssp EEEECSSSS
T ss_pred EEEEEcCcc
Confidence 999998754
No 217
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.17 E-value=6.3e-10 Score=55.94 Aligned_cols=68 Identities=12% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCceEEEEEEEccCCCC---CcEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP---SMRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C 65 (90)
..|+++.|.|.+. +.+ .+.+.|++++ ..+ ....++..........|.|.++...|.|.|.|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (212)
T 1q0x_L 13 SPGETVTLTCRSS--TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFC 90 (212)
T ss_dssp CTTCCEEEEEEES--SSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCCEEEEEEec--ccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEE
Confidence 5699999999987 766 4789999852 111 11245544444555679999999999999999
Q ss_pred EEEcCCc
Q psy16902 66 RVTNNSG 72 (90)
Q Consensus 66 ~~~~~~~ 72 (90)
.+.+..+
T Consensus 91 ~~~~~~~ 97 (212)
T 1q0x_L 91 ALWSNNK 97 (212)
T ss_dssp EEECSSC
T ss_pred EEecCch
Confidence 9998765
No 218
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.17 E-value=8.3e-10 Score=55.09 Aligned_cols=75 Identities=12% Similarity=0.117 Sum_probs=49.3
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEE-eCCe-EEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTF-KFGF-ISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
.|+.+.|.|.+. .+.|.|.+.|++++..+.......... .... .......+...|.|.|.|.+.|..+.....+.
T Consensus 120 ~g~~~~l~C~~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 120 TSNIRRIICSTS-GGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp STTEEEEEEEEE-EESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CCCeEEEEEecC-CccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 477899999982 278999999999998776432211111 1121 11122334457899999999999887665544
No 219
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.16 E-value=2.7e-10 Score=66.77 Aligned_cols=83 Identities=17% Similarity=0.280 Sum_probs=63.5
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. +.+. +.+.|++++..+......... .......|.+..+...|.|.|.|.+.|..|.......|
T Consensus 632 ~~G~~v~L~C~~~--~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l 709 (816)
T 3dmk_A 632 QVGQYLTLHCSVP--GGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPL 709 (816)
T ss_dssp ESSCEEEEEEBCC--CSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCCeEEEEEEEe--CCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEE
Confidence 4589999999876 5554 589999999877554333332 22345679999999999999999999999988888777
Q ss_pred EEecCCC
Q psy16902 81 SVQGRRE 87 (90)
Q Consensus 81 ~v~~~~~ 87 (90)
.|..+|.
T Consensus 710 ~V~~~P~ 716 (816)
T 3dmk_A 710 NVYVPPR 716 (816)
T ss_dssp CEEEEEE
T ss_pred EEEeCCc
Confidence 7766554
No 220
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.16 E-value=6e-10 Score=56.97 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=55.7
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCC--EE---c---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFING--RP---L---------PASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~--~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. .. + ....++..........|.|.++...|.|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (240)
T 1moe_A 14 SLGQRATMSCRAG--ESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYY 91 (240)
T ss_dssp CTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred cCCCCEEEEEeCC--CccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEE
Confidence 4699999999997 777 7889999852 11 1 0123555544445567999999999999999
Q ss_pred EEEEcCCcc-eEeEEEEEEec
Q psy16902 65 VRVTNNSGS-AESTALLSVQG 84 (90)
Q Consensus 65 C~~~~~~~~-~~~~~~l~v~~ 84 (90)
|.+.+..+. ......|.|..
T Consensus 92 C~~~n~~~~~~~~~~~l~V~~ 112 (240)
T 1moe_A 92 CQQTNEDPYTFGGGTKLEIKG 112 (240)
T ss_dssp EEECSSSSCCBCCCEEEEECC
T ss_pred EEEccCCceeecCCEEEEEec
Confidence 999987543 22334555544
No 221
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.16 E-value=1.2e-09 Score=57.19 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=51.7
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCE-----Ec---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGR-----PL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..+|+++.|.|.+. +.|.+.+.|+++.. .+ ....++..........|.|.++...|.|.|.|.+
T Consensus 24 v~~G~~v~L~C~~~--~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 101 (276)
T 3auv_A 24 ASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQ 101 (276)
T ss_dssp CCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EcCCCCEEEEeEcC--CCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEE
Confidence 35799999999997 88889999998531 11 0123555544455567999999999999999999
Q ss_pred EcCCc
Q psy16902 68 TNNSG 72 (90)
Q Consensus 68 ~~~~~ 72 (90)
.+..+
T Consensus 102 ~n~~~ 106 (276)
T 3auv_A 102 HYTTP 106 (276)
T ss_dssp CSSSS
T ss_pred ecCCc
Confidence 98643
No 222
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.16 E-value=1.1e-09 Score=50.96 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=49.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RPL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. +.+.+.+.|++.. ..+ . ...++..........|.|.++..+|.|.|.|.+.
T Consensus 16 ~~G~~vtL~C~~~--~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 93 (119)
T 2e27_L 16 SLGGKVTITCKAN--QDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYCLQY 93 (119)
T ss_dssp ETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEC
T ss_pred eCCCCEEEEEEeC--CCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEEEEc
Confidence 4699999999987 7777889999753 111 0 1245555444455679999999999999999988
Q ss_pred cC
Q psy16902 69 NN 70 (90)
Q Consensus 69 ~~ 70 (90)
+.
T Consensus 94 ~~ 95 (119)
T 2e27_L 94 DN 95 (119)
T ss_dssp GG
T ss_pred cC
Confidence 74
No 223
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.16 E-value=2.1e-10 Score=62.10 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=56.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee-CCEEcCCCCceEEEEeCCeEEEEEcCCCCCC------CeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI-NGRPLPASSRATTTFKFGFISLDLLSIVLHD------SGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. |.|.|.+.|++ ++..+............+ .|.+..+...| .|.|.|.+.|..|...
T Consensus 17 ~~G~~v~l~C~~~--g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~ 92 (388)
T 2v5m_A 17 SNSTGAEIECKAS--GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGSII 92 (388)
T ss_dssp ETTTCEEEECEEE--EESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEEEEEEEEEETTEEEE
T ss_pred EcCccEEEEEECC--CCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCceEEEEEEccCCeEE
Confidence 3688999999997 89999999999 777665433222222222 58888998887 9999999999887542
Q ss_pred -eEEEEEEecCC
Q psy16902 76 -STALLSVQGRR 86 (90)
Q Consensus 76 -~~~~l~v~~~~ 86 (90)
....+.+..++
T Consensus 93 s~~~~v~v~~~p 104 (388)
T 2v5m_A 93 SRDVHVRAVVAQ 104 (388)
T ss_dssp CCCEEEEEECCC
T ss_pred ecceEEEEcccc
Confidence 33455554444
No 224
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.15 E-value=1e-09 Score=56.41 Aligned_cols=68 Identities=15% Similarity=0.122 Sum_probs=50.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|+++. . .+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (242)
T 2znx_A 14 TPGNSVSLSCRAS--QSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (242)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred cCCCcEEEEEEeC--CCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEe
Confidence 5699999999987 8888999999853 1 11 01235554444455679999999999999999999
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 92 n~~~ 95 (242)
T 2znx_A 92 NSXP 95 (242)
T ss_dssp SSSS
T ss_pred cCCc
Confidence 8743
No 225
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.15 E-value=1.2e-09 Score=56.17 Aligned_cols=79 Identities=11% Similarity=0.124 Sum_probs=54.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--CCEEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--NGRPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++ ++..+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 148 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 225 (247)
T 2ghw_B 148 SPGERATLSCRAS--QSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQR 225 (247)
T ss_dssp CTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEEC
T ss_pred cCCCcEEEEEEeC--CCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEc
Confidence 4689999999997 88888999998 44322 11234444333445569999999999999999998
Q ss_pred cCCcceE-eEEEEEEe
Q psy16902 69 NNSGSAE-STALLSVQ 83 (90)
Q Consensus 69 ~~~~~~~-~~~~l~v~ 83 (90)
+...... ....|.|.
T Consensus 226 ~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 226 SNWPPTFGQGTKVEVK 241 (247)
T ss_dssp SSSSCEECCCEEEEEC
T ss_pred cCCCceEcCCEEEEEC
Confidence 8533222 23345553
No 226
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.15 E-value=1.4e-09 Score=50.10 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=52.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcC-------------------CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLP-------------------ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|... ....+.+.|++...... -..|..+..++ +|.|.++...|.|.|
T Consensus 13 ~~G~~v~L~~~~~--p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng---SL~I~nvt~~D~G~Y 87 (111)
T 2qsq_A 13 AEGKEVLLLVHNL--PQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA---SLLIQNIIQNDAGFY 87 (111)
T ss_dssp ETTSCEEEEEESC--CSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS---CEEECSCCGGGCEEE
T ss_pred ccCCCEEEEEeCC--CCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCC---cEEEccCcccCCeEE
Confidence 4689999999754 33345799998753110 12344443222 599999999999999
Q ss_pred EEEEEcCCc-ceEeEEEEEEec
Q psy16902 64 TVRVTNNSG-SAESTALLSVQG 84 (90)
Q Consensus 64 ~C~~~~~~~-~~~~~~~l~v~~ 84 (90)
.|.+.+..+ .......|.|..
T Consensus 88 tc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 88 TLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEeCCCcEEEEEEEEEEec
Confidence 999998755 455566776654
No 227
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.14 E-value=1.2e-09 Score=57.15 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=57.6
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeCCEEcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFINGRPLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
..|+.+.|.|.+. +.|. +.+.|++++..+.......... ......|.+..+...|.|.|.|.+.|..|.......
T Consensus 199 ~~g~~v~l~C~~~--~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 276 (292)
T 4dkd_C 199 IRGEAAQIVCSAS--SVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMF 276 (292)
T ss_dssp CSSSCEEEEEEEE--ESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEE
T ss_pred ecCCCEEEEEEec--CCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEE
Confidence 4699999999987 6554 5678888887654432211110 011236899999999999999999999999888888
Q ss_pred EEEecC
Q psy16902 80 LSVQGR 85 (90)
Q Consensus 80 l~v~~~ 85 (90)
|.|.+.
T Consensus 277 l~V~~~ 282 (292)
T 4dkd_C 277 FRVVES 282 (292)
T ss_dssp ECC---
T ss_pred EEEeeC
Confidence 877643
No 228
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.14 E-value=1.2e-09 Score=56.45 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=50.2
Q ss_pred CCCceEEEEEEEccCCCC-----CcEEEEeeCCE--E----c--------CCCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-----SMRVDWFINGR--P----L--------PASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~~--~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
..|+++.|.|.+. +.+ .+.+.|++++. . + ....++..........|.|.++...|.|.|
T Consensus 47 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 124 (252)
T 3bkj_L 47 NLGEQASISCRSS--QSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVY 124 (252)
T ss_dssp CTTSCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred eCCCcEEEEEEcC--CCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEE
Confidence 4689999999987 776 68899998541 0 0 112455444445556799999999999999
Q ss_pred EEEEEcCCc
Q psy16902 64 TVRVTNNSG 72 (90)
Q Consensus 64 ~C~~~~~~~ 72 (90)
.|.+.+..+
T Consensus 125 ~C~~~~~~~ 133 (252)
T 3bkj_L 125 YCFQASLVP 133 (252)
T ss_dssp EEEECSBSS
T ss_pred EEEEEcCCc
Confidence 999988654
No 229
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.14 E-value=8.5e-10 Score=57.06 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=55.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. +.+.+.+.|+++. ..+. ...++..........|.|.++...|.|.|.|.+.
T Consensus 151 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 228 (256)
T 3umt_A 151 SLGERVSITCRAS--QDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQY 228 (256)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEC
T ss_pred ECCCCEEEEEEEe--cCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEe
Confidence 4689999999997 8888899999842 1110 1234544444555679999999999999999998
Q ss_pred cCCcce-EeEEEEEEecC
Q psy16902 69 NNSGSA-ESTALLSVQGR 85 (90)
Q Consensus 69 ~~~~~~-~~~~~l~v~~~ 85 (90)
+..... .....|.|...
T Consensus 229 ~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 229 ASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp SSSSCEECCCEEEEEC--
T ss_pred eCCCcEECCCEEEEEECC
Confidence 854322 22346666543
No 230
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.14 E-value=4.9e-10 Score=60.02 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=56.1
Q ss_pred CCCceEEEEEEE-----ccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC-cce--
Q psy16902 3 PQKRKIHFEARI-----EPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS-GSA-- 74 (90)
Q Consensus 3 ~~g~~~~l~C~~-----~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~-~~~-- 74 (90)
..|+.+.|.|.. . +.|.+.+.|++++..+....++.. .. ..|.+.++...|.|.|.|.+.|.. +..
T Consensus 133 ~~g~~~~l~C~~~~~~~~--g~p~~~v~W~k~~~~l~~~~~~~~--~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~ 206 (349)
T 4dep_C 133 IEYGIQRITCPNVDGYFP--SSVKPTITWYMGCYKIQNFNNVIP--EG--MNLSFLIALISNNGNYTCVVTYPENGRTFH 206 (349)
T ss_dssp TTCSEEEEECCSCTTSSC--TTSCCEEEEEETTEECCSCSSEEE--ET--TEEEEESCCGGGCEEEEEEEEEEETTEEEE
T ss_pred ecCccEEEEcCCCccccc--CCCCceEEEeeCCEECCCccceee--cC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEE
Confidence 458899999963 3 788999999999998765433322 22 258899999999999999999976 443
Q ss_pred -EeEEEEEEec
Q psy16902 75 -ESTALLSVQG 84 (90)
Q Consensus 75 -~~~~~l~v~~ 84 (90)
.....+.+..
T Consensus 207 ~~~~~~l~v~~ 217 (349)
T 4dep_C 207 LTRTLTVKVVG 217 (349)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEEc
Confidence 4445566654
No 231
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.14 E-value=1.2e-09 Score=56.07 Aligned_cols=66 Identities=12% Similarity=0.163 Sum_probs=48.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee----------------CCEEcCCC---CceEEEE-eCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI----------------NGRPLPAS---SRATTTF-KFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~----------------~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|+++.|.|.+. +.+.+.+.|++ ++...... .++.... ......|.|.++...|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~ 91 (246)
T 4dzb_B 14 KSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 91 (246)
T ss_dssp ETTSCEEEEEEES--SSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEE
T ss_pred eCCCcEEEEeEec--CCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEE
Confidence 4699999999987 88889999998 22222211 3444432 2345679999999999999
Q ss_pred EEEEEEcC
Q psy16902 63 YTVRVTNN 70 (90)
Q Consensus 63 y~C~~~~~ 70 (90)
|.|.+.+.
T Consensus 92 Y~C~~~~~ 99 (246)
T 4dzb_B 92 YICSARTS 99 (246)
T ss_dssp EEEEECCS
T ss_pred EEEEEecC
Confidence 99999865
No 232
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.13 E-value=3.5e-09 Score=50.31 Aligned_cols=83 Identities=17% Similarity=0.215 Sum_probs=56.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC---CEE---c-CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc---
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN---GRP---L-PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG--- 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~---~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~--- 72 (90)
.+|++++|.|.+. +. ...+.|++. +.. + ....++..........|.|.++..+|.|.|.|.+.+..+
T Consensus 31 ~~G~svtL~C~~s--~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~ 107 (134)
T 3kg5_A 31 KRGFTVKMHCYMN--SA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEV 107 (134)
T ss_dssp ETTCCEEEEEECC--CT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECTTTCCE
T ss_pred eCCCCEEEEEEEC--CC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcCCCCce
Confidence 4699999999875 44 577899986 321 1 234566555455566799999999999999999887632
Q ss_pred ceEeEEEEEEecCCCC
Q psy16902 73 SAESTALLSVQGRREG 88 (90)
Q Consensus 73 ~~~~~~~l~v~~~~~~ 88 (90)
.......|.|.+.|.+
T Consensus 108 ~fg~GT~L~V~~~p~~ 123 (134)
T 3kg5_A 108 YQGCGTELRVMGFSTL 123 (134)
T ss_dssp EECCCEEEEEECC---
T ss_pred EECCCEEEEEecCCCH
Confidence 2233457777766553
No 233
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.13 E-value=2.5e-09 Score=49.14 Aligned_cols=65 Identities=14% Similarity=0.261 Sum_probs=47.7
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E----EcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R----PLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
.+|++++|.|.+. +. +.+.+.|++.. . .+....++.... ......|.|.++...|.|.|.|.+.+
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 13 ETGESLTIKCVLK--DHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp CTTCCEEEEEEEE--SCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ccCCCEEEEeEEC--CCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 5799999999987 54 56889999752 1 222334554432 23456799999999999999999987
No 234
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.13 E-value=1.2e-09 Score=62.69 Aligned_cols=79 Identities=23% Similarity=0.364 Sum_probs=60.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe-EEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES-TALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~~~l~ 81 (90)
..|+.+.|.|.+. .|.+.+.|++++..+....++..... ...|.+.++...|.|.|.|.+.|..|.... ...|.
T Consensus 480 ~~g~~v~l~C~~~---~~~~~i~W~~~g~~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 554 (642)
T 1e07_A 480 EDKDAVAFTCEPE---AQNTTYLWWVNGQSLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLD 554 (642)
T ss_pred cCCCeEEEEEECC---CCCcEEEEEECCEeCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEE
Confidence 4689999999875 47899999999998877666554322 236899999999999999999999886543 45666
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
|...|
T Consensus 555 V~~~p 559 (642)
T 1e07_A 555 VLYGP 559 (642)
T ss_pred EEeCC
Confidence 65443
No 235
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.13 E-value=5.4e-10 Score=56.83 Aligned_cols=63 Identities=16% Similarity=-0.004 Sum_probs=48.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS 71 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~ 71 (90)
.+|++++|.|... +.+.+.+.|++++..+... .. .......|.|.++...|.|.|.|.+.+..
T Consensus 118 ~~G~~v~L~C~~~--~~~~~~~~W~k~g~~~~~~--~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 118 MPGENISLTCSSA--HIPFDRFSLAKEGELSLPQ--HQ--SGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CTTCCCEEEEECS--SSCCSEEEEEETTCSSCCS--EE--ECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCCCEEEEEeCC--CCCCCEEEEEECCCccccc--cc--CCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 4689999999655 7778899999998765442 11 12234568999999999999999999753
No 236
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.13 E-value=2.4e-09 Score=49.14 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=49.3
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCE-----Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGR-----PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-----~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..+|++++|.|.+. +.+.+.+.|++... .+ . ...++..........|.|.++...|.|.|.|.+
T Consensus 16 ~~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 93 (111)
T 1i3g_L 16 TSVGDRVSITCKAS--QDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQ 93 (111)
T ss_dssp CCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEE
T ss_pred EcCCCCEEEEEEeC--CCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEEEE
Confidence 35799999999987 66678899997531 11 0 124555444445567999999999999999998
Q ss_pred EcC
Q psy16902 68 TNN 70 (90)
Q Consensus 68 ~~~ 70 (90)
.+.
T Consensus 94 ~~~ 96 (111)
T 1i3g_L 94 YSS 96 (111)
T ss_dssp CSS
T ss_pred ecC
Confidence 875
No 237
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.13 E-value=1.2e-10 Score=58.06 Aligned_cols=67 Identities=4% Similarity=-0.209 Sum_probs=42.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|.+. +.| +.+.|++++..+...... ... .......|.|.++...|.|.|.|.+.|..+
T Consensus 112 ~~G~~v~L~C~~~--~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 112 TSGENVTLQCGSR--LRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp -----CEEEEEES--SCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cCCCcEEEEEEcC--CCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 4689999999987 777 899999998765421110 000 011224689999999999999999998654
No 238
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.13 E-value=3.9e-10 Score=57.94 Aligned_cols=84 Identities=23% Similarity=0.328 Sum_probs=57.1
Q ss_pred CCCceEEEEEEEccCCCCCcE-----EEEeeCCEEcCCC--------Cce-------EEE---EeCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-----VDWFINGRPLPAS--------SRA-------TTT---FKFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-----~~w~~~~~~~~~~--------~~~-------~~~---~~~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.|.+. +.|++++...... ... .+. ...+...|.|.++...|
T Consensus 16 ~~G~~v~L~C~~~--g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 93 (248)
T 3pv7_A 16 PLNDNVTIFCNIF--YSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEE 93 (248)
T ss_dssp ETTSCEEECCEEE--ESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGG
T ss_pred eCCCCEEEeeEEe--cCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHH
Confidence 4689999999987 776665 9999864221100 000 000 00112348999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEEecCCCC
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSVQGRREG 88 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v~~~~~~ 88 (90)
.|.|.|.+.+..+.......|.|.++|.+
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v 122 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQGTVQLEVVASPAS 122 (248)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEBCCEE
T ss_pred CeEEEEEEEeCCccceeEEEEEEecCCce
Confidence 99999999998877777778888776654
No 239
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.13 E-value=2.8e-09 Score=54.82 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=51.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EE---------cCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RP---------LPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|++.. .. .....++..........|.|.++...|.|.|.|.+.
T Consensus 17 ~~G~~v~L~C~~~--~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 94 (250)
T 3esu_F 17 SLGDRVTISCRAS--QDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQG 94 (250)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred eCCCcEEEEEEec--ccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEe
Confidence 4699999999997 8888999999853 11 111245544444555679999999999999999998
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 95 n~~~ 98 (250)
T 3esu_F 95 NTLP 98 (250)
T ss_dssp SSSS
T ss_pred eCCC
Confidence 8654
No 240
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.12 E-value=2.5e-09 Score=54.91 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=47.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE--------------cCCCCceEEEE-eCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP--------------LPASSRATTTF-KFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~--------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|+++.|.|.+. +.+.+.+.|++.. .. .....++.... ......|.|.++...|.|.|.|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 91 (245)
T 3nfj_J 14 PVGSPLSLECTVE--GTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLC 91 (245)
T ss_dssp ETTCCEEEEEEEE--SCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 4699999999998 8889999999821 10 00113444332 2345679999999999999999
Q ss_pred EEEc
Q psy16902 66 RVTN 69 (90)
Q Consensus 66 ~~~~ 69 (90)
.+.+
T Consensus 92 ~~~~ 95 (245)
T 3nfj_J 92 AWSV 95 (245)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9998
No 241
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.12 E-value=4.8e-10 Score=59.84 Aligned_cols=78 Identities=13% Similarity=0.212 Sum_probs=58.2
Q ss_pred CCCceEEEEEE-----EccCCCCCcEEEEeeCCEEcCCC-CceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc----
Q psy16902 3 PQKRKIHFEAR-----IEPVGDPSMRVDWFINGRPLPAS-SRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG---- 72 (90)
Q Consensus 3 ~~g~~~~l~C~-----~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~---- 72 (90)
..|+.+.|.|. .. +.|.+.+.|++++..+... .++... .....|.+..+...|.|.|.|.+.|..+
T Consensus 133 ~~g~~v~l~C~~~~~~~~--g~p~~~v~W~k~g~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (339)
T 3o4o_C 133 TLSTSGVLVCPDLSEFTR--DKTDVKIQWYKDSLLLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQY 208 (339)
T ss_dssp ETTSCEEEECCSCTTTCC--SSSCCCBCCEESSCBCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCC
T ss_pred ECCCCEEEEecCCccccc--CCCCceEEEecCCeeCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEE
Confidence 46889999998 55 7889999999999877654 333332 2223689999999999999999999876
Q ss_pred ceEeEEEEEEec
Q psy16902 73 SAESTALLSVQG 84 (90)
Q Consensus 73 ~~~~~~~l~v~~ 84 (90)
.......|.|..
T Consensus 209 ~~~~~~~l~V~~ 220 (339)
T 3o4o_C 209 NITRSIELRIKK 220 (339)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEEEEc
Confidence 344455666653
No 242
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.12 E-value=2e-09 Score=55.80 Aligned_cols=80 Identities=11% Similarity=0.134 Sum_probs=54.4
Q ss_pred CCCceEEEEEEEccCCCCCc-----EEEEee--CCEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-----RVDWFI--NGRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-----~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|.+. +.+.+ .+.|++ ++..+. ...++..........|.|.++...|.|.|
T Consensus 134 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 211 (256)
T 1nqb_A 134 SLGDQASISCRSS--QSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVY 211 (256)
T ss_dssp CTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred ecCCcEEEEeEec--CcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEE
Confidence 4689999999987 77654 899998 443221 12344443344556799999999999999
Q ss_pred EEEEEcCCcc-eEeEEEEEEec
Q psy16902 64 TVRVTNNSGS-AESTALLSVQG 84 (90)
Q Consensus 64 ~C~~~~~~~~-~~~~~~l~v~~ 84 (90)
.|.+.+.... ......|.|..
T Consensus 212 ~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 212 YCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEECSSSSCEECCCEEEEECC
T ss_pred EEEEccCCceEECCCEEEEEEC
Confidence 9999875332 22234555543
No 243
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.12 E-value=9.6e-11 Score=58.18 Aligned_cols=65 Identities=17% Similarity=0.225 Sum_probs=49.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcC-CCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLS-IVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
..|+.+.|.|.+. + +. .+.|++++..+.... . ..|.|.+ +...|.|.|.|.+.|..|.......+
T Consensus 12 ~~G~~v~L~C~~~--~-~~-~i~W~k~g~~l~~~~-------~--~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 12 ISGTSVELTCPLD--S-DE-NLKWEKNGQELPQKH-------D--KHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EETTEEEEECSSC--C-CT-TCEEEETTEEECSCC-------C--SEEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred eCCcEEEEEEeCC--C-CC-ceEEEECCEECCCCC-------C--CEEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 3589999999875 5 33 499999998876531 1 1488899 99999999999999987764444333
No 244
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.11 E-value=9.5e-10 Score=50.55 Aligned_cols=82 Identities=10% Similarity=0.128 Sum_probs=55.5
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCE-----Ec-C--------CCCceEEEE--eCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGR-----PL-P--------ASSRATTTF--KFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~-----~~-~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|++++|.|.+. +.. ...+.|++... .+ . ...++.... ......|.|.+++..|.|.|.|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C 91 (113)
T 1zox_A 14 QEQGSLTVQCRYT--SGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWC 91 (113)
T ss_dssp ETTSCEEEEEEEC--GGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred eCCCcEEEEeECC--CCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEE
Confidence 4699999999986 433 34599998642 11 1 013444432 2334579999999999999999
Q ss_pred EEEcCCcceEeEEEEEEecCC
Q psy16902 66 RVTNNSGSAESTALLSVQGRR 86 (90)
Q Consensus 66 ~~~~~~~~~~~~~~l~v~~~~ 86 (90)
.+.+..........|.|...|
T Consensus 92 ~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 92 GITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp EECCSSSCCEEEEEEEEECC-
T ss_pred eeEcCCCCccEEEEEEEEcCC
Confidence 998875555666777776554
No 245
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.11 E-value=5.1e-11 Score=61.80 Aligned_cols=67 Identities=13% Similarity=0.174 Sum_probs=52.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. |.|.|.+.|++++...... .. + ..+...|.|.|.|.+.|..|.......|.|
T Consensus 198 ~~g~~~~l~C~~~--g~P~p~i~W~~~~~~~~~~--------g~---~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 262 (265)
T 2oz4_A 198 PENSQQTPMCQAW--GNPLPELKCLKDGTFPLPI--------GE---S--VTVTRDLEGTYLCRARSTQGEVTREVTVNV 262 (265)
T ss_dssp ETTCEECCCCCCE--EESCCEEEEEETTTEECCT--------TS---C--EECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEeECc--cCCCCeEEEEECCcccCCC--------Cc---E--EEeehhhCeEEEEEEECCCCcEEEEEEEEE
Confidence 4688999999887 9999999999998622221 11 1 136678999999999999999888888887
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
..
T Consensus 263 ~~ 264 (265)
T 2oz4_A 263 LS 264 (265)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 246
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.11 E-value=2.9e-10 Score=56.66 Aligned_cols=67 Identities=6% Similarity=0.018 Sum_probs=48.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|++++|.|.+. + +++.+.|++++..+...... ..........|.+.++...|.|.|.|.+.|..+
T Consensus 112 ~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 112 TSGKSVTLLCQSR--S-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CTTCCEEEEEEEE--E-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred cCCCeEEEEEecC--C-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 4689999999886 5 45689999998765432211 111112234689999999999999999999765
No 247
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.11 E-value=2.8e-10 Score=58.94 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=55.5
Q ss_pred CCCceEEEEEEEc-cCCCCCcEEEEeeCCE-EcCC---------------------CCceEEEE--eCCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIE-PVGDPSMRVDWFINGR-PLPA---------------------SSRATTTF--KFGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~-~~~~~~~~~~w~~~~~-~~~~---------------------~~~~~~~~--~~~~~~~~~~~~~~ 57 (90)
..|+++.|.|.+. ..+.|.+.+.|++++. .... ..+..... ......|.+..+..
T Consensus 131 ~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~ 210 (268)
T 3mj6_A 131 RVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKE 210 (268)
T ss_dssp ETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCG
T ss_pred ccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCCh
Confidence 4688999999872 0267899999998421 1100 00111110 01233589999999
Q ss_pred CCCeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 58 HDSGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 58 ~~~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
.|.|.|.|.+.|..+.......|.|.
T Consensus 211 ~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 211 SDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 99999999999998888888888874
No 248
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.11 E-value=2e-09 Score=52.95 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=51.0
Q ss_pred CCCceEEEEEEEccCCCCCc--EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM--RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+|+.+.|.|.+. +.+.| .+.|++++..+...... .....+.+. ...|.|.|.|.+.+.. .....+
T Consensus 11 ~~G~~v~l~C~~~--~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l 78 (184)
T 3b5h_A 11 DLGSKILLTCSLN--DSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANI 78 (184)
T ss_dssp EETTEEEEEEEEE--SCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEE
T ss_pred ecCCCEEEEEECC--CCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCc---CcEEEE
Confidence 4689999999987 76666 89999999877544321 112234554 5789999999999832 244566
Q ss_pred EEecCCCC
Q psy16902 81 SVQGRREG 88 (90)
Q Consensus 81 ~v~~~~~~ 88 (90)
.|..+|.+
T Consensus 79 ~V~~~P~~ 86 (184)
T 3b5h_A 79 QLHGPPRV 86 (184)
T ss_dssp EECCSCCC
T ss_pred EEecCCce
Confidence 66665554
No 249
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.11 E-value=9e-09 Score=52.26 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=53.1
Q ss_pred CCCceEEEEEEEccCCCCCc---EEEEeeCCEE-----------cCC------CCceEEEE---eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM---RVDWFINGRP-----------LPA------SSRATTTF---KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~---~~~w~~~~~~-----------~~~------~~~~~~~~---~~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+.+ .+.|++++.. +.. ..+..... ..+...|.|.++...|
T Consensus 17 ~~G~~v~L~C~v~--~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 94 (226)
T 4f80_A 17 MVGEDADLPCHLF--PTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASD 94 (226)
T ss_dssp ETTSCEEEEEEEE--SCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGG
T ss_pred EcCCcEEEEEEEE--CCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHH
Confidence 4699999999987 54443 6899886531 110 11222211 1234579999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
.|.|.|.+.|..+.......+.+.
T Consensus 95 ~G~Y~C~a~n~~~~~~~~v~~~~~ 118 (226)
T 4f80_A 95 SGKYLCYFQDGDFYEKALVELKVA 118 (226)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CeeEEEEEECCCcEEEEEEEEeec
Confidence 999999999988776665555544
No 250
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.11 E-value=4e-09 Score=59.80 Aligned_cols=77 Identities=13% Similarity=0.257 Sum_probs=55.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+++.|.|.+. +.+.....|++++..+.....+... .....+|.|.++...|.|.|.|.+.+..+.......+.+
T Consensus 61 ~~g~~~~L~c~~~--~~~~~~~~W~~~~~~l~~~~~~~~~-~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v 137 (527)
T 3qs9_E 61 DVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSI 137 (527)
T ss_dssp CSSCCEEEEEECS--CCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEE
T ss_pred eccccEEEEEEEe--cCCceeEEEEecCCccCcccccCCC-cceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEE
Confidence 4699999999986 7777899999999876654443322 123446999999999999999999998877666555544
No 251
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.10 E-value=5.3e-10 Score=55.33 Aligned_cols=68 Identities=10% Similarity=-0.046 Sum_probs=49.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce--EeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA--ESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~--~~~~~l 80 (90)
.+|+++.|.|.+. + +.+.+.|++++... .. ....|.|.++...|.|.|.|.+.|..+.. .....|
T Consensus 20 ~~G~~v~L~C~~~--~-~~~~~~W~k~g~~~--------~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 86 (184)
T 2gi7_A 20 PLEKPVTLRCQGP--P-GVDLYRLEKLSSSR--------YQ--DQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLEL 86 (184)
T ss_dssp ETTCCEEEEEECS--T-TCSEEEEEETTTCC--------EE--SSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred cCCCcEEEEEeCC--C-CCCEEEEEECCccc--------cC--cccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEE
Confidence 4699999999875 5 77899999997540 11 12258899999999999999999976522 223455
Q ss_pred EEe
Q psy16902 81 SVQ 83 (90)
Q Consensus 81 ~v~ 83 (90)
.|.
T Consensus 87 ~V~ 89 (184)
T 2gi7_A 87 VAT 89 (184)
T ss_dssp EEE
T ss_pred Eec
Confidence 553
No 252
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.10 E-value=3.1e-10 Score=56.33 Aligned_cols=59 Identities=8% Similarity=0.213 Sum_probs=47.0
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.|+++.|.|.+ |.|.+.|++++..+..... ....|.+..+...|.|.|.|.+.|..|..
T Consensus 121 ~G~~v~l~C~~-----p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL-----TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS-----SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC-----CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 78999999943 7899999999998764321 12247888999999999999999987654
No 253
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=4.9e-10 Score=55.60 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=45.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS 71 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~ 71 (90)
.+|+++.|.|.+. + +.+.+.|++++..+.. ..........|.|.++...|.|.|.|.+.+..
T Consensus 111 ~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 111 ISGEKVTFYCRLD--T-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp ETTCEEEEEEECS--S-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ccCCEEEEEEEcC--C-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 4689999999864 4 5678999999864432 11122334568999999999999999988753
No 254
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.10 E-value=1.3e-09 Score=55.03 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=48.8
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCE--Ec------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGR--PL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..|+++.|.|.+. .+.+ .+.+.|++++. .+ ....++..........|.|.++...|.|.|.|.+
T Consensus 13 ~~G~~v~L~C~v~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 91 (216)
T 2xzc_L 13 APGQKVTISCSGS-SSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGT 91 (216)
T ss_dssp CTTCCEEEEEECC-TTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCCeEEEEEEee-cCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEEE
Confidence 4689999999853 1332 57899998531 11 0123554444455667999999999999999999
Q ss_pred EcCCc
Q psy16902 68 TNNSG 72 (90)
Q Consensus 68 ~~~~~ 72 (90)
.+..+
T Consensus 92 ~~~~~ 96 (216)
T 2xzc_L 92 WDSSL 96 (216)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 99765
No 255
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.10 E-value=7.2e-10 Score=55.09 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=54.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--CCEEc----------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--NGRPL----------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+++.|.|...+.+.+.+.+.|++ ++..+ ....++....+. .|.|.++...|.|.|.|.+.+.
T Consensus 12 ~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c~~~n~ 88 (182)
T 1hnf_A 12 ALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVSIYDT 88 (182)
T ss_dssp ETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEEEEEET
T ss_pred ecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEEEEEeC
Confidence 35889999984321234568899999 87654 223454443222 5999999999999999999998
Q ss_pred CcceE--eEEEEEEec
Q psy16902 71 SGSAE--STALLSVQG 84 (90)
Q Consensus 71 ~~~~~--~~~~l~v~~ 84 (90)
.|... ....|.|.+
T Consensus 89 ~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 89 KGKNVLEKIFDLKIQE 104 (182)
T ss_dssp TSCEEEEEEEEEEEEC
T ss_pred CCceeEEEEEEEEEcC
Confidence 77654 344566654
No 256
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.10 E-value=1.6e-09 Score=57.28 Aligned_cols=66 Identities=14% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCceEEEEEEE------ccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE-cCCcce
Q psy16902 4 QKRKIHFEARI------EPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT-NNSGSA 74 (90)
Q Consensus 4 ~g~~~~l~C~~------~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~-~~~~~~ 74 (90)
.|+++.|.|.+ . +.|.+.+.|++++..+......... ... .|.+.++...|.|.|.|.+. +..|..
T Consensus 117 ~g~~v~l~C~~~~~~~~~--g~p~~~i~W~k~~~~l~~~~~~~~~-~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 117 VAGDGGLVCPYMEFFKNE--NNELPKLQWYKDCKPLLLDNIHFSG-VKD--RLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp TTSCEEEECSSCTTTCTT--TTCCCCCEEEETTEECCCCSSSEEE-ETT--EEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred cCCCeEEEEecccccccC--CCCCCEEEEEECCEECCCccceEee-cCc--eEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 58889999986 5 8899999999999988653322222 222 58999999999999999999 676655
No 257
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.09 E-value=1.8e-11 Score=53.51 Aligned_cols=54 Identities=22% Similarity=0.376 Sum_probs=42.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCC-CCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSI-VLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~y~C~~~~ 69 (90)
..|++++|.|.+. |.|. +.|++++..+.... . ..|.|.++ ...|.|.|.|.+..
T Consensus 12 ~~G~~v~L~C~~~--g~P~--i~W~kdg~~l~~~~-------~--~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 12 ISGTSVELTCPLD--SDEN--LKWEKNGQELPQKH-------D--KHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp EETTEEEEECSSC--CCSS--CEEEETTEECTTCC-------S--SCCBCCSCCTTTTCSCEEEECSS
T ss_pred EcCCeEEEEEECC--CCCc--EEEEECCEECcCCC-------C--CEEEECccCccCcCEEEEEEEcc
Confidence 4589999999876 7763 99999999876431 1 14788885 77999999998764
No 258
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.09 E-value=3.1e-09 Score=54.89 Aligned_cols=68 Identities=15% Similarity=0.197 Sum_probs=49.8
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---E-cC--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---P-LP--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|+++.|.|.+. +. +.+.+.|++.. . . +. ...++..........|.|.++...|.|.|.|.
T Consensus 15 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (256)
T 3ux9_B 15 APGQRVTISCSGS--SSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYCQ 92 (256)
T ss_dssp CTTCCEEEEEECC--TTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred cCCCcEEEEEecC--CCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEEE
Confidence 4699999999986 65 77889999742 1 1 00 12355554445556799999999999999999
Q ss_pred EEcCCc
Q psy16902 67 VTNNSG 72 (90)
Q Consensus 67 ~~~~~~ 72 (90)
+.+..+
T Consensus 93 ~~~~~~ 98 (256)
T 3ux9_B 93 VRDNNE 98 (256)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 988543
No 259
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.09 E-value=9.9e-10 Score=56.72 Aligned_cols=81 Identities=11% Similarity=0.163 Sum_probs=55.1
Q ss_pred CCCceEEEEEEEccCCCCCc----EEEEeeCC--EEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM----RVDWFING--RPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~----~~~w~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. +.+.+ .+.|+++. ..+. ...++..........|.|.++...|.|.|.
T Consensus 146 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 223 (253)
T 3uzq_A 146 SLGQRATISCRAS--ENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYF 223 (253)
T ss_dssp CTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred eCCCCEEEEEEec--CccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 4689999999997 77776 89999842 1110 123444444445567999999999999999
Q ss_pred EEEEcCCcce-EeEEEEEEecC
Q psy16902 65 VRVTNNSGSA-ESTALLSVQGR 85 (90)
Q Consensus 65 C~~~~~~~~~-~~~~~l~v~~~ 85 (90)
|.+.+..+.. .....|.|...
T Consensus 224 C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 224 CQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp EEECSSSSCCBCCCEEEEECCC
T ss_pred EEEccCCCcEECCCEEEEEcCC
Confidence 9998864332 22345666543
No 260
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.09 E-value=1.1e-09 Score=61.52 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=50.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE--EcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR--PLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
..|+.+.|.|.+. +.+.+.+.|++++. .+. ...++..........|.|.++...|.|.|.|.+.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (523)
T 2rcj_C 13 TPGQRVTISCTGT--SSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASW 90 (523)
T ss_pred ecCCcEEEEEEEe--ccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEc
Confidence 5699999999997 88889999998741 110 1134433323344579999999999999999999
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 91 n~~g 94 (523)
T 2rcj_C 91 NSSD 94 (523)
T ss_pred cCCC
Confidence 8754
No 261
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.09 E-value=1.4e-09 Score=49.54 Aligned_cols=63 Identities=13% Similarity=0.153 Sum_probs=45.4
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..+|++++|.|... +. ...+.|++++..+... ..........+.|..+...|.|.|.|.+.+.
T Consensus 16 v~~G~~VtL~C~~~--~~-~~~~~w~k~g~~~~~~---~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 16 VSLGDTVTLRCHLP--RM-AAWVQLWLNGTLRFDK---EKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp CCTTCEEEEEEECC--SS-CEEEEEEETTEEEEEE---EECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred cCcCCCEEEEEEcC--CC-CcEEEEEECCccceee---eccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 45799999999875 43 4678899998754210 0111233456899999999999999999875
No 262
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.09 E-value=3.4e-09 Score=48.41 Aligned_cols=65 Identities=14% Similarity=0.278 Sum_probs=47.0
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E----EcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R----PLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
.+|++++|.|.+. +. +.+.+.|+++. . .+....++.... ......|.|.++...|.|.|.|.+.+
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 13 ETGESLTINCVLR--DTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp CTTCCEEEEEEEC--CSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCCEEEEeEeC--CCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 5699999999986 54 35679999763 1 222334554432 23456799999999999999999886
No 263
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.08 E-value=2.8e-10 Score=57.31 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=48.9
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC--ceEEEEeCCeEEEEEcCC-CCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS--RATTTFKFGFISLDLLSI-VLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~g~y~C~~~~~~~~ 73 (90)
+|+++.|.|. +.|.|.+.|++++..+.... +.... .. ..|.|.++ ...|.|.|.|.+.|..|.
T Consensus 127 ~G~~v~L~C~----g~p~p~i~W~k~~~~l~~~~~~~~~~~-~~--~~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 127 SGTTVILTCP----QYPGSEILWQHNDKNIGGDEDDKNIGS-DE--DHLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp ETTEEEEECS----CCCSSCEEEEETTEEESCCTTCTTEEE-ET--TEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred cCCcEEEEcC----CCCCCceEEEECCEECCCccCCceEec-CC--CEEEEeeCCccccCEEEEEEeccCCCC
Confidence 6889999994 67888999999998875431 11111 12 25899999 999999999999999885
No 264
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.08 E-value=2.4e-09 Score=55.01 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=54.3
Q ss_pred CCCceEEEEEEEccCCCC-----CcEEEEeeCC--E--E-c-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-----SMRVDWFING--R--P-L-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~--~--~-~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. . . + . ...++..........|.|.++...|.|.|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 91 (247)
T 1svz_A 14 SLGDQASISCRSS--QTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIY 91 (247)
T ss_dssp CTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCCCEEEEEeCC--CcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEE
Confidence 4699999999987 776 6889999842 1 1 1 0 12455544445556799999999999999
Q ss_pred EEEEEcCCcc-eEeEEEEEEec
Q psy16902 64 TVRVTNNSGS-AESTALLSVQG 84 (90)
Q Consensus 64 ~C~~~~~~~~-~~~~~~l~v~~ 84 (90)
.|.+.+..+. ......|.|..
T Consensus 92 ~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 92 YCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp EEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEccCCccEECCCEEEEEEC
Confidence 9999887543 11223455543
No 265
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.08 E-value=2.1e-10 Score=61.08 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=45.4
Q ss_pred CCCceEEEEEEEccCCCC-Cc-EEEEeeCCEEcCCC--CceEEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SM-RVDWFINGRPLPAS--SRATTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~-~~~w~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. +.+ ++ .+.|++++..+... .......+.. ...|.+......|.|.|.|.+.|..+...
T Consensus 233 ~~G~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 233 RAENQVNVTCQVR--KFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp SSTTCCEEEEEEE--EEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCE
T ss_pred CCCCcEEEEEEEc--cccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 4689999999997 744 43 79999999876432 1111111111 13477778888899999999999987655
Q ss_pred eEEEE
Q psy16902 76 STALL 80 (90)
Q Consensus 76 ~~~~l 80 (90)
....+
T Consensus 311 s~~~~ 315 (327)
T 2wng_A 311 SKSHD 315 (327)
T ss_dssp EEEEE
T ss_pred hhheE
Confidence 44433
No 266
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.08 E-value=2.6e-09 Score=57.23 Aligned_cols=81 Identities=12% Similarity=0.171 Sum_probs=58.0
Q ss_pred CCCceEEEEEEEccCCCCC-----------cEEEEeeCCEE------cC-CCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-----------MRVDWFINGRP------LP-ASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-----------~~~~w~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+.+.|.|.+. +.|. +.+.|++++.. +. ............ .|.+..+...|.|.|.
T Consensus 20 ~~G~~v~L~C~~~--~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~ 95 (349)
T 4dep_C 20 FEDEPARIKCPLF--EHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFRPTLLNDTGNYT 95 (349)
T ss_dssp ETTSCEEEECTCC--CCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEESSCCGGGCEEEE
T ss_pred ecCCeEEEEcccc--ccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEccCChhhCEEEE
Confidence 4799999999876 6554 89999998732 11 001111112222 5899999999999999
Q ss_pred EEEEcCCcceEeEEEEEEecCCC
Q psy16902 65 VRVTNNSGSAESTALLSVQGRRE 87 (90)
Q Consensus 65 C~~~~~~~~~~~~~~l~v~~~~~ 87 (90)
|.+.|..+.......+.|...+.
T Consensus 96 C~a~n~~~~~~~~~~l~V~~~~~ 118 (349)
T 4dep_C 96 CMLRNTTYCSKVAFPLEVVQKDS 118 (349)
T ss_dssp EEEECSSCEEEEEEEEEEECCCT
T ss_pred EEEecCCceEEEEEEEEEecCCc
Confidence 99999988888777888876443
No 267
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.08 E-value=3.4e-10 Score=60.43 Aligned_cols=83 Identities=20% Similarity=0.280 Sum_probs=60.3
Q ss_pred CCCceEEEEEEEccC-----CCCCcEEEEeeCCEEc--CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPV-----GDPSMRVDWFINGRPL--PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~-----~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+.+. +.|.+.+.|++++..+ ............. .|.+.++...|.|.|.|.+.+..+...
T Consensus 31 ~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~~~n~~g~~~ 108 (339)
T 3o4o_C 31 LEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSGTYVCTTRNASYCDK 108 (339)
T ss_dssp ETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCEEEECCEEETTEEEE
T ss_pred ECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCEEEEEEEECCcceEE
Confidence 468999999976311 6678899999998763 3221222222222 589999999999999999999888777
Q ss_pred eEEEEEEecCCC
Q psy16902 76 STALLSVQGRRE 87 (90)
Q Consensus 76 ~~~~l~v~~~~~ 87 (90)
....|.|...+.
T Consensus 109 ~~~~l~V~~~~~ 120 (339)
T 3o4o_C 109 MSIELRVFENTD 120 (339)
T ss_dssp EEEEEEEECSCG
T ss_pred EEEEEEEEcCCC
Confidence 777888876543
No 268
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.08 E-value=1e-09 Score=58.43 Aligned_cols=82 Identities=18% Similarity=0.235 Sum_probs=54.4
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCEEcC---------CCCceEEEEe-----CCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGRPLP---------ASSRATTTFK-----FGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|+++.|.|.+. +. |.+.+.|++++.... ...++..... .....|.|.++...|.|.|.|.+
T Consensus 16 ~~G~~v~L~C~~~--~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 93 (327)
T 2wng_A 16 AAGESAILHCTVT--SLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVK 93 (327)
T ss_dssp ETTSCEEECCEES--CCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEE
T ss_pred ecCCcEEEEEEcc--CcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEe
Confidence 4689999999987 76 888999999874311 0113322111 22335999999999999999999
Q ss_pred EcCCcceE-----eEEEEEEecCC
Q psy16902 68 TNNSGSAE-----STALLSVQGRR 86 (90)
Q Consensus 68 ~~~~~~~~-----~~~~l~v~~~~ 86 (90)
.+..+... ....|.|...|
T Consensus 94 ~n~~~~~~~~~~~~~~~l~V~~~p 117 (327)
T 2wng_A 94 FRKGSPDTEFKSGAGTELSVRAKP 117 (327)
T ss_dssp EESSTTCEEEEECCCEEEEEEBCC
T ss_pred ecCCCcceeEeecCcEEEEEEecC
Confidence 98755311 23455665443
No 269
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.08 E-value=1.3e-09 Score=50.01 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=48.4
Q ss_pred CCCCceEEEEEEEccCCCC----CcEEEEeeCC--E--E-c-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 2 DPQKRKIHFEARIEPVGDP----SMRVDWFING--R--P-L-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~----~~~~~w~~~~--~--~-~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
..+|++++|.|.+. +.+ .+.+.|++.. . . + . ...++..........|.|.++...|.|.|
T Consensus 13 ~~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y 90 (111)
T 1j05_L 13 VSLGQRATMSCRAG--ESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATY 90 (111)
T ss_dssp CCTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EeCCCCEEEEeecC--CCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCEEE
Confidence 35799999999986 655 4679999752 1 1 1 0 12455554444556799999999999999
Q ss_pred EEEEEcC
Q psy16902 64 TVRVTNN 70 (90)
Q Consensus 64 ~C~~~~~ 70 (90)
.|.+.+.
T Consensus 91 ~C~~~~~ 97 (111)
T 1j05_L 91 YCQQTNE 97 (111)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9998875
No 270
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.07 E-value=3.6e-09 Score=55.56 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=54.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--CCEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--NGRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+ +.+.|++ ++..+. ...++..........|.|.++...|.|.|.|.+.
T Consensus 175 ~~G~~v~L~C~~~--~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 251 (282)
T 1qok_A 175 SPGEKVTITCSAS--SSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQR 251 (282)
T ss_dssp CTTCCEEEEEEES--SCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred cCCCcEEEEEEec--CCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEe
Confidence 4689999999987 777 8999998 443321 1244444434455679999999999999999998
Q ss_pred cCCc-ceEeEEEEEEe
Q psy16902 69 NNSG-SAESTALLSVQ 83 (90)
Q Consensus 69 ~~~~-~~~~~~~l~v~ 83 (90)
+... .......|.|.
T Consensus 252 ~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 252 SSYPLTFGAGTKLELK 267 (282)
T ss_dssp SSSSCEECCCEEEEEC
T ss_pred eCCCceEeCCEEEEEe
Confidence 7533 22233455554
No 271
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.07 E-value=9.4e-09 Score=49.51 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=53.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RPL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. +.+.+.+.|++.. ..+ . ...++..........|.|.+++..|.|.|.|.+.
T Consensus 29 ~~G~sVtL~C~~s--~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 106 (146)
T 2yc1_B 29 SPGERATLSCRAS--QSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFAIYYCQQY 106 (146)
T ss_dssp CTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred ecCCCEEEEEEEC--CCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 5699999999986 6667789999753 111 1 1245555444455679999999999999999988
Q ss_pred cCCcc-eEeEEEEEEec
Q psy16902 69 NNSGS-AESTALLSVQG 84 (90)
Q Consensus 69 ~~~~~-~~~~~~l~v~~ 84 (90)
+.... ......|.|.+
T Consensus 107 ~~~~~~fg~GT~L~V~~ 123 (146)
T 2yc1_B 107 RYSPRTFGQGTKVEIKR 123 (146)
T ss_dssp SSSSCEECCCEEEEEC-
T ss_pred cCCCCeECCCEEEEEeC
Confidence 75321 22234555543
No 272
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.07 E-value=2.7e-09 Score=54.98 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=56.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. .+.|.+.+.|++++..+... .. ...+.+..+...|.|.|.|.+.+..+.......+.|
T Consensus 95 ~~g~~v~l~C~~~-~~~p~~~v~W~~~g~~~~~~------~~--~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 165 (262)
T 3rjd_A 95 TEGEPLALRCHAW-KDKLVYNVLYYRNGKAFKFF------HW--NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTV 165 (262)
T ss_dssp ETTSCEEEEEEEG-GGCCCEEEEEEETTEEEEEE------EE--CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEE
T ss_pred ecCCeEEEEEEcc-CCCCCceEEEEECCcccccc------CC--CCeEEEEECChhhCEEEEEEEeCCCCccccceEEEe
Confidence 3689999999983 27788999999998765321 11 124888999999999999999998877766667777
Q ss_pred ec
Q psy16902 83 QG 84 (90)
Q Consensus 83 ~~ 84 (90)
.+
T Consensus 166 ~~ 167 (262)
T 3rjd_A 166 KE 167 (262)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 273
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.07 E-value=6e-09 Score=53.97 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=49.4
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C----------CCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P----------ASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. +.| .+.+.|+++. . .+ . ...++..... .....|.|.++...|.
T Consensus 13 ~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 13 RPSETLSLTCTVS--GFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp CTTSEEEEEEEEE--SSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCC
T ss_pred cCCceEEEEEEEe--cccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccC
Confidence 5699999999987 764 6889999852 1 11 0 1235554432 3455799999999999
Q ss_pred eEEEEEEEcCCc
Q psy16902 61 GEYTVRVTNNSG 72 (90)
Q Consensus 61 g~y~C~~~~~~~ 72 (90)
|.|.|.+.+..|
T Consensus 91 G~Y~C~a~n~~g 102 (257)
T 1f3r_B 91 GTYYCTRDLYGG 102 (257)
T ss_dssp EEEEEEEESSSS
T ss_pred EEEEEEEccccc
Confidence 999999998743
No 274
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.07 E-value=8.6e-10 Score=55.23 Aligned_cols=79 Identities=18% Similarity=0.271 Sum_probs=52.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCC-----ceEEEEeCCeE--EEEEcCCCCCCCeEEEEEEEcCCcce-
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASS-----RATTTFKFGFI--SLDLLSIVLHDSGEYTVRVTNNSGSA- 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~g~y~C~~~~~~~~~- 74 (90)
.+|+.+.|.|.+. +.|.+.+.|++++..+.... ........... .+.+.++...|.|.|.|.+.+..+..
T Consensus 22 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 99 (212)
T 2v9r_A 22 SKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (212)
T ss_dssp CTTCCEEECCEEE--EESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEE
T ss_pred eCCCcEEEEEEcC--CCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCcee
Confidence 4689999999987 88999999999998775432 11111111111 12334568889999999999987654
Q ss_pred EeEEEEEEe
Q psy16902 75 ESTALLSVQ 83 (90)
Q Consensus 75 ~~~~~l~v~ 83 (90)
.....+.|.
T Consensus 100 ~~~~~l~V~ 108 (212)
T 2v9r_A 100 SHDASLEVA 108 (212)
T ss_dssp CCCEEEEEC
T ss_pred ecceEEEEE
Confidence 233455554
No 275
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.06 E-value=5e-09 Score=52.37 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=54.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC-------------------CCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA-------------------SSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|... +.+.+.+.|++++..... ..+..... ...|.+.++...|.|.|
T Consensus 12 ~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~---~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 12 AEDNNVLLLVHNL--PLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS---NGSLLFQMITMKDMGVY 86 (208)
T ss_dssp ETTCCEEEEEECC--CSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT---TSCEEECSCCGGGCEEE
T ss_pred ecCCcEEEEEeCC--CCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec---CCeEEEccccccCCeEE
Confidence 4699999999865 788899999987532111 11222211 12489999999999999
Q ss_pred EEEEEcCC-cceEeEEEEEEecC
Q psy16902 64 TVRVTNNS-GSAESTALLSVQGR 85 (90)
Q Consensus 64 ~C~~~~~~-~~~~~~~~l~v~~~ 85 (90)
.|.+.+.. +.......|.|..+
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQP 109 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECC
T ss_pred EEEEEcccCceeEEEEEEEeccC
Confidence 99999984 45555556666544
No 276
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.06 E-value=4.9e-09 Score=49.16 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=54.4
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCC-----EEc---------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFING-----RPL---------PASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. +.+ .+.+.|++.. ..+ ....++..........|.|.++...|.|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~DsG~Y~ 91 (126)
T 4ffy_L 14 SLGQRATISCRAS--ESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAATYY 91 (126)
T ss_dssp ETTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred eCCCCEEEEEecC--CCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHCEEEE
Confidence 4689999999987 555 5678999742 111 0123554444455667999999999999999
Q ss_pred EEEEcCCcc-eEeEEEEEEecC
Q psy16902 65 VRVTNNSGS-AESTALLSVQGR 85 (90)
Q Consensus 65 C~~~~~~~~-~~~~~~l~v~~~ 85 (90)
|.+.+.... ......|.|.+.
T Consensus 92 C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 92 CQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp EEECSSSSCEECCCEEEEEEC-
T ss_pred EEEecCCCcEECCCEEEEEecC
Confidence 999875432 223356666543
No 277
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.06 E-value=1.6e-09 Score=50.34 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=51.3
Q ss_pred CCCceEEEEEEEccC--CCCCcEEEEeeCCEE------cC--------------CCCceEEEEe--CCeEEEEEcCCCCC
Q psy16902 3 PQKRKIHFEARIEPV--GDPSMRVDWFINGRP------LP--------------ASSRATTTFK--FGFISLDLLSIVLH 58 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~--~~~~~~~~w~~~~~~------~~--------------~~~~~~~~~~--~~~~~~~~~~~~~~ 58 (90)
..|+++.|.|.+... +...+.+.|++.+.. +. ...++.+... .....|.|.+++..
T Consensus 12 ~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 91 (124)
T 1neu_A 12 AVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYS 91 (124)
T ss_dssp ETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGG
T ss_pred EeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChh
Confidence 468999999998511 124678999875320 00 0123333211 12346999999999
Q ss_pred CCeEEEEEEEcCCcc--eEeEEEEEEecCCC
Q psy16902 59 DSGEYTVRVTNNSGS--AESTALLSVQGRRE 87 (90)
Q Consensus 59 ~~g~y~C~~~~~~~~--~~~~~~l~v~~~~~ 87 (90)
|.|.|.|.+.+..+. ......|.|...|.
T Consensus 92 D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 92 DNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp GCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred hCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 999999999987653 45566788876654
No 278
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.05 E-value=5.9e-09 Score=54.09 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=53.4
Q ss_pred CCCceEEEEEEEccCC-CCCc--EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCC---CCCCCe--EEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVG-DPSM--RVDWFINGRPLPASSRATTTFKFGFISLDLLSI---VLHDSG--EYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g--~y~C~~~~~~~~~ 74 (90)
.+|+.+.|.|.+. + .|.| .+.|++++..+.. ....... .+.+... ...|.| .|.|.+.|..+..
T Consensus 16 ~~G~~v~l~C~~~--g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~ 87 (265)
T 2oz4_A 16 EVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQ 87 (265)
T ss_dssp ETTEEEEEEEEEE--SCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEE
T ss_pred ecCCCEEEEEEcc--CCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCCc
Confidence 5699999999997 7 6766 9999999987754 1121222 2333332 566777 5999999998887
Q ss_pred EeEEEEEEecC
Q psy16902 75 ESTALLSVQGR 85 (90)
Q Consensus 75 ~~~~~l~v~~~ 85 (90)
.....|.|...
T Consensus 88 ~~~~~l~V~~~ 98 (265)
T 2oz4_A 88 ETLQTVTIYSF 98 (265)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEeCC
Confidence 77778888653
No 279
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.05 E-value=1.2e-09 Score=53.64 Aligned_cols=58 Identities=19% Similarity=0.288 Sum_probs=46.7
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|.+. +.|.+. +.|++++..+... ...|.+.++...|.|.|.|.+.+..+
T Consensus 20 ~~G~~v~L~C~~~--~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~n~~~ 78 (175)
T 1fnl_A 20 LEKDSVTLKCQGA--YSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTNLSTL 78 (175)
T ss_dssp ETTCCEEEEEECC--CBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECSSSCC
T ss_pred eCCCcEEEEeeCC--CCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEeeCCcc
Confidence 4689999999987 777776 7899998765432 22588999999999999999988654
No 280
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.05 E-value=1.3e-09 Score=61.20 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=52.2
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEeeCCEEcCCCCceEEEEeCC----eEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFINGRPLPASSRATTTFKFG----FISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|.+. +. |.| .+.|++++..+............+ ...|.+..+...| |.|.|.+.|..|....
T Consensus 232 ~~G~~~~l~C~~~--g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~ 308 (523)
T 2rcj_C 232 TSGGTAALGCLVK--DYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 308 (523)
T ss_pred ccCCceEEEEEEe--ceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcce
Confidence 4689999999987 75 767 899999987643211000110111 2358888999889 9999999999887655
Q ss_pred EEEEE
Q psy16902 77 TALLS 81 (90)
Q Consensus 77 ~~~l~ 81 (90)
...+.
T Consensus 309 ~~~l~ 313 (523)
T 2rcj_C 309 DKRVE 313 (523)
T ss_pred EEecC
Confidence 55443
No 281
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.05 E-value=1.1e-09 Score=51.60 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=53.4
Q ss_pred CCCceEEEEEEEcc-CCCCCcEEEEeeCCEEc-----C-----------------------CC--CceEEEEeCCeEEEE
Q psy16902 3 PQKRKIHFEARIEP-VGDPSMRVDWFINGRPL-----P-----------------------AS--SRATTTFKFGFISLD 51 (90)
Q Consensus 3 ~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~-----~-----------------------~~--~~~~~~~~~~~~~~~ 51 (90)
..|+++.|.|.+.. ...+.+.+.|++..... . .. .++.+.. .....|.
T Consensus 17 ~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~~~~sL~ 95 (135)
T 1xt5_A 17 HAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-LAAPTLR 95 (135)
T ss_dssp ETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC-TTSCCEE
T ss_pred eCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec-CCCCeEE
Confidence 46899999998741 24677889999864321 0 00 2222211 1224589
Q ss_pred EcCCCCCCCeEEEEEEEcCC-----cceEeEEEEEEecC
Q psy16902 52 LLSIVLHDSGEYTVRVTNNS-----GSAESTALLSVQGR 85 (90)
Q Consensus 52 ~~~~~~~~~g~y~C~~~~~~-----~~~~~~~~l~v~~~ 85 (90)
|.++...|.|.|.|.+.+.. +.......|.|.+.
T Consensus 96 I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g~ 134 (135)
T 1xt5_A 96 LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 134 (135)
T ss_dssp ECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEETT
T ss_pred ECCCChhhCcEEEEEEEcCCccccccccceeEEEEEecC
Confidence 99999999999999999853 33446667776553
No 282
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.05 E-value=1.7e-09 Score=54.00 Aligned_cols=78 Identities=17% Similarity=0.303 Sum_probs=55.2
Q ss_pred CCCceEEEEEEEccCC-CCCcEEEEeeCCEEcC----CC--------------CceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSMRVDWFINGRPLP----AS--------------SRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
..|+++.|.|.+. + .+.+.+.|++++..+. .. .+..+. ....|.|.+++..|.|.|
T Consensus 11 ~~G~~v~L~C~~~--~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 11 ILGESVTLPLEFP--AGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp ETTSCEEECCCCC--CCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGCEEE
T ss_pred EecCeEEEeccCC--CcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccCceE
Confidence 4689999999875 4 4457899999875431 10 122222 123599999999999999
Q ss_pred EEEEEcCCcceEeEEEEEEecC
Q psy16902 64 TVRVTNNSGSAESTALLSVQGR 85 (90)
Q Consensus 64 ~C~~~~~~~~~~~~~~l~v~~~ 85 (90)
.|.+.+..+.......|.|.++
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~ 107 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQ 107 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEEEcc
Confidence 9999998776666666776544
No 283
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.04 E-value=6.8e-10 Score=59.00 Aligned_cols=81 Identities=12% Similarity=-0.027 Sum_probs=55.0
Q ss_pred CCCceEEEEEEEccCCC-----CCcEEEEeeCCEEcCCCCceEEEEeCC-eEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGD-----PSMRVDWFINGRPLPASSRATTTFKFG-FISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-----~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+++.|.|.+. +. +.+.+.|.+++..+... +........ ...|.|.++...|.|.|.|.+.+..+....
T Consensus 13 ~~G~~v~l~C~~~--~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~~ 89 (313)
T 2d9q_B 13 HLGDPITASCIIK--QNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQILD 89 (313)
T ss_dssp CTTCCEEEEECCC--TTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEEE
T ss_pred cCCCCEEEEEEEC--CCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeEE
Confidence 5699999999886 65 56889999999876543 211111111 256999999999999999987654443334
Q ss_pred EEEEEEecCC
Q psy16902 77 TALLSVQGRR 86 (90)
Q Consensus 77 ~~~l~v~~~~ 86 (90)
...|.+..+|
T Consensus 90 ~~~l~v~~~P 99 (313)
T 2d9q_B 90 QVELRAGYPP 99 (313)
T ss_dssp EEEEEECCCC
T ss_pred EEEEccCCCC
Confidence 4556555444
No 284
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.04 E-value=4.3e-10 Score=57.05 Aligned_cols=82 Identities=23% Similarity=0.342 Sum_probs=55.6
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeCCEEcC---------CCCce--EEE----------EeCCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFINGRPLP---------ASSRA--TTT----------FKFGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~~~~~~---------~~~~~--~~~----------~~~~~~~~~~~~~~~~~~ 60 (90)
..|+.+.|.|.+. +.+. +.+.|++++.... ....+ ... .... ..|.+.++...|.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~L~i~~v~~~D~ 89 (231)
T 2pet_A 13 MRGKSVILDCTPT--GTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-GRLVLAEAQVGDE 89 (231)
T ss_dssp ETTCCEEECCCCB--SCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-CCEEESSCCGGGC
T ss_pred EcCCCEEEecccC--CCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-ceEEEcccCcccC
Confidence 4689999999887 7774 8899997643211 00000 111 1111 1389999999999
Q ss_pred eEEEEEEEcCC-cceEeEEEEEEecCCC
Q psy16902 61 GEYTVRVTNNS-GSAESTALLSVQGRRE 87 (90)
Q Consensus 61 g~y~C~~~~~~-~~~~~~~~l~v~~~~~ 87 (90)
|.|.|.+.+.. +.......|.|..+|.
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 90 RDYVCVVRAGAAGTAEATARLNVFAKPE 117 (231)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEEEBCCC
T ss_pred ceEEEEEEecCCCceEEEEEEEEEecCC
Confidence 99999999986 6666677777776543
No 285
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.04 E-value=7.1e-09 Score=60.42 Aligned_cols=86 Identities=10% Similarity=0.129 Sum_probs=56.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEE--------EEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATT--------TFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+.....+.+.+.|++++..+........ ........|.+..+...|.|.|.|.+.+..+..
T Consensus 237 ~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 316 (772)
T 3v2a_R 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK 316 (772)
T ss_dssp ETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEE
T ss_pred ecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcce
Confidence 468999999998711255678999998876543221111 001123468999999999999999999988877
Q ss_pred EeEEEEEEecCCCC
Q psy16902 75 ESTALLSVQGRREG 88 (90)
Q Consensus 75 ~~~~~l~v~~~~~~ 88 (90)
.....+.|..+|.+
T Consensus 317 ~~~~~l~V~~~p~~ 330 (772)
T 3v2a_R 317 KNSTFVRVHEKPFV 330 (772)
T ss_dssp EEEEEEEEECCCC-
T ss_pred eEEEEEEEeCCCee
Confidence 77778888776654
No 286
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.04 E-value=1.7e-09 Score=55.04 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=48.8
Q ss_pred CCCceEEEEEEEccCCCC-Cc-EEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SM-RVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~-~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
..|+++.|.|.+. +.+ .+ .+.|+++. ..+ ....++..........|.|.++...|.|.|.|.
T Consensus 32 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 109 (234)
T 2j6e_L 32 TPGQRVTISCSGS--SSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCA 109 (234)
T ss_dssp CTTCEEEEEEECC--TTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEE
T ss_pred eCCCcEEEEEEec--CCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEE
Confidence 5699999999986 543 34 69999863 111 012355444444556799999999999999999
Q ss_pred EEcCCc
Q psy16902 67 VTNNSG 72 (90)
Q Consensus 67 ~~~~~~ 72 (90)
+.+..+
T Consensus 110 ~~~~~~ 115 (234)
T 2j6e_L 110 TWDDSL 115 (234)
T ss_dssp EEETTT
T ss_pred EEcCCc
Confidence 998766
No 287
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.04 E-value=4.2e-09 Score=54.25 Aligned_cols=60 Identities=25% Similarity=0.405 Sum_probs=49.0
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.+|+.+.|.|.+. +.|.+ .+.|++++..+.... ..+.+..+...|.|.|.|.+.+..+..
T Consensus 14 ~~G~~v~l~C~~~--~~~~~~~~~W~~~g~~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~~~~~s~ 74 (262)
T 3rjd_A 14 FQEETVTLHCEVL--HLPGSSSTQWFLNGTATQTST----------PSYRITSASVNDSGEYRCQRGLSGRSD 74 (262)
T ss_dssp ETTCCEEEEEECS--SCCCTTCEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEESSSCCCC
T ss_pred eCCCeEEEEEECC--CCCCCceEEEEECCEEeeccC----------CeEEEecCCcccCeEEEEEEecCCccc
Confidence 4689999999987 77777 899999998875431 147889999999999999998876544
No 288
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.04 E-value=2.9e-08 Score=45.46 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC----EEcCCCCc--eEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING----RPLPASSR--ATTTF--KFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~----~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+. ...+.|.++|.+.+ ..+..... ..... +.....+++..+...|.|.|.|.+.+..|..
T Consensus 27 ~~G~~~~LeCpv~-yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g~i 105 (122)
T 1xau_A 27 WTGELFKIECPVK-YCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQVI 105 (122)
T ss_dssp CTTSCEEEEEEEE-CSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred ecCCeEEEEeEec-CCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCCce
Confidence 3588999999996 13579999999865 23322111 11111 1234568999999999999999999987755
Q ss_pred EeEE-EEEEe
Q psy16902 75 ESTA-LLSVQ 83 (90)
Q Consensus 75 ~~~~-~l~v~ 83 (90)
.+.. .|.|.
T Consensus 106 eSHs~ti~V~ 115 (122)
T 1xau_A 106 NSHSVTIHVR 115 (122)
T ss_dssp ECCCEEEEEC
T ss_pred eeeEEEEEEE
Confidence 5443 34443
No 289
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.04 E-value=6.1e-10 Score=64.90 Aligned_cols=83 Identities=18% Similarity=0.252 Sum_probs=58.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEE-Ee--eCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-eEeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVD-WF--INGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-AESTA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~-w~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-~~~~~ 78 (90)
..|+++.|.|.+. |.|.|.+. |+ +++..+................+.+.++...+.|.|.|.+.|..|. .....
T Consensus 177 ~~G~~v~l~C~~~--g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~ 254 (731)
T 2v5y_A 177 NAGQFATFQCSAI--GRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYA 254 (731)
T ss_dssp ETTSCEEEEEEEE--SCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCE
T ss_pred eCCCcEEEEEEeC--CCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeE
Confidence 4688999999998 99999987 77 5665443211111111111346999999999999999999999987 55556
Q ss_pred EEEEecCCC
Q psy16902 79 LLSVQGRRE 87 (90)
Q Consensus 79 ~l~v~~~~~ 87 (90)
.+.|..+|.
T Consensus 255 ~l~V~~~P~ 263 (731)
T 2v5y_A 255 ELVVKEPPV 263 (731)
T ss_dssp EEEEECCCC
T ss_pred EEEEecCCC
Confidence 777776554
No 290
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.04 E-value=4.7e-10 Score=60.49 Aligned_cols=72 Identities=18% Similarity=0.081 Sum_probs=54.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.+|+.+.|.|.+. +.|.|.+.|++++..+ ... ...|.+..+...|.|.|.|.+.+..+.......+.+
T Consensus 109 ~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~--------~~~--~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v 176 (363)
T 1wio_A 109 LQGQSLTLTLESP--PGSSPSVQCRSPRGKN--------IQG--GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176 (363)
T ss_dssp ESBSCEEEEEECC--TTCCCCEEEECSSSCE--------EEE--SSEEEECSBCGGGCEECEEEEEETTEEEEECCEECE
T ss_pred ecCCCEEEEEEcC--CCCCCeEEEEcCCCcc--------ccc--ceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEE
Confidence 4689999999987 7899999999986432 111 125889999999999999999987666655556666
Q ss_pred ecCC
Q psy16902 83 QGRR 86 (90)
Q Consensus 83 ~~~~ 86 (90)
...|
T Consensus 177 ~~~p 180 (363)
T 1wio_A 177 LAFQ 180 (363)
T ss_dssp ECCS
T ss_pred ecCC
Confidence 5544
No 291
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.03 E-value=8.6e-10 Score=54.21 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=53.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC------------CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA------------SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|++++|.|.+. .|.+.+.|++++..+.. ..+..+. .....|.|.+++..|.|.|.|.+.+.
T Consensus 8 ~~G~~VtL~c~~~---~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 8 VVYGNVTFHVPSN---VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD--TVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp ETTCCEEECCCCS---SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEEC--TTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EcCCCEEEcCCCC---CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEe--CCCCeEEECCCChhhCceEEEEEeCC
Confidence 4689999999763 47889999998763211 1122221 12235999999999999999999887
Q ss_pred CcceEeEEEEEEecC
Q psy16902 71 SGSAESTALLSVQGR 85 (90)
Q Consensus 71 ~~~~~~~~~l~v~~~ 85 (90)
.+ .....|.|.++
T Consensus 83 ~~--~~~~~L~V~~~ 95 (171)
T 1ccz_A 83 TD--TMKFFLYVLEM 95 (171)
T ss_dssp CS--CEEEEEEEECC
T ss_pred CC--cEEEEEEEECc
Confidence 76 45566777654
No 292
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.03 E-value=1.3e-10 Score=57.73 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCceEEEEEE-EccCCCCC-cEEEEeeCCEEcCC--CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEAR-IEPVGDPS-MRVDWFINGRPLPA--SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~-~~~~~~~~-~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|. .. +.|. +.+.|++++..+.. ..+.... .....|.+.++...|.|.|.|.+.+..+...
T Consensus 21 ~~G~~v~L~C~~~~--~~p~~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 21 KEGKGMVLLCDPPY--HFPDDLSYRWLLNEFPVFITMDKRRFVS--QTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp ETTCCEEECCCCCS--EESSCCEEEEEESSTTCBCCCSSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred ECCCCEEEeccccc--cCCCceEEEEEECCceeeeeeCCCeEEE--cCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 46899999998 55 7788 99999999866532 2222222 1223589999999999999999998654443
No 293
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.03 E-value=2e-08 Score=48.24 Aligned_cols=79 Identities=10% Similarity=0.115 Sum_probs=53.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RPL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|.+. ..+...+.|++.. +.+ . ...|+..........|.|.+++..|.|.|.|.+.
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~~~ 90 (143)
T 3u6r_L 13 SPGERATLSCRAS--QSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAVYYCQQR 90 (143)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEC
T ss_pred eCCCCEEEEEEEC--CCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEEEEEEEe
Confidence 5799999999987 5556789999742 111 0 1245555444556679999999999999999987
Q ss_pred cCCcceEeEEEEEEe
Q psy16902 69 NNSGSAESTALLSVQ 83 (90)
Q Consensus 69 ~~~~~~~~~~~l~v~ 83 (90)
+..........|.|.
T Consensus 91 ~~~~~fg~gt~L~V~ 105 (143)
T 3u6r_L 91 SDWVTFGGGTKVEIK 105 (143)
T ss_dssp SSBCEECCCEEEEEC
T ss_pred cCCCEECCCEEEEEC
Confidence 653222223355554
No 294
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.03 E-value=6.3e-09 Score=53.79 Aligned_cols=67 Identities=19% Similarity=0.232 Sum_probs=49.0
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEeeC--CEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWFIN--GRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. +.+. +.+.|++. +..+. ...++..........|.|.++...|.|.|.|.+
T Consensus 162 ~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 239 (256)
T 3juy_B 162 SPGERATFSCRSS--HSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQV 239 (256)
T ss_dssp CTTSCEEEEEEES--SCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEE
T ss_pred eCCCCEEEEEEEC--CCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEE
Confidence 4689999999997 6665 89999873 21111 123454444455567999999999999999999
Q ss_pred EcCC
Q psy16902 68 TNNS 71 (90)
Q Consensus 68 ~~~~ 71 (90)
.+..
T Consensus 240 ~~~~ 243 (256)
T 3juy_B 240 YGAS 243 (256)
T ss_dssp CCSS
T ss_pred eeCC
Confidence 8853
No 295
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.03 E-value=3.8e-09 Score=56.74 Aligned_cols=79 Identities=18% Similarity=0.231 Sum_probs=54.3
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeC--CEEc-----------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFIN--GRPL-----------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~--~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+.+.|.|.+. +. +.+.+.|+++ +..+ ....++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (344)
T 1za6_B 13 KPGASVKISCKAS--GYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSED 90 (344)
T ss_dssp CTTCCEEEEEEEE--SSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eCCCcEEEEEEcC--CccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 5699999999997 65 4678999986 2211 01245554432 244679999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEEe
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
.|.|.|.+.+..+.......|.|.
T Consensus 91 ~G~Y~C~~~n~~~~~~~~~~l~V~ 114 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQGTLVTVS 114 (344)
T ss_dssp CEEEEEEETTTTCEECCCEEEEEC
T ss_pred CEEEEEEEecCcceecCcEEEEEe
Confidence 999999998864443344455554
No 296
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.03 E-value=8.5e-10 Score=56.53 Aligned_cols=80 Identities=18% Similarity=0.244 Sum_probs=54.7
Q ss_pred CCCceEEEEEEEccCC---CCCcEEEEeeCCEEcC------------------------------CCCceEEEEeCCeEE
Q psy16902 3 PQKRKIHFEARIEPVG---DPSMRVDWFINGRPLP------------------------------ASSRATTTFKFGFIS 49 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~---~~~~~~~w~~~~~~~~------------------------------~~~~~~~~~~~~~~~ 49 (90)
.+|+++.|.|.+. + .+.+.+.|++++.... ...+..+.. .+...
T Consensus 15 ~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~ 91 (250)
T 2fbo_J 15 HAGGTVELPCSYQ--LANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-LAAPT 91 (250)
T ss_dssp CTTSCEEECCEEE--ECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-TTSCC
T ss_pred ecCCeEEEEEEeE--cCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-CCcce
Confidence 4699999999987 5 7889999998864320 011111111 01235
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCcce-----EeEEEEEEecC
Q psy16902 50 LDLLSIVLHDSGEYTVRVTNNSGSA-----ESTALLSVQGR 85 (90)
Q Consensus 50 ~~~~~~~~~~~g~y~C~~~~~~~~~-----~~~~~l~v~~~ 85 (90)
|.|.++...|.|.|.|.+.+..+.. .....|.|..+
T Consensus 92 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 92 LRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred EEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 8999999999999999999876543 34566776654
No 297
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.03 E-value=1.4e-08 Score=47.74 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeC--CE----EcCCCCceEEEEe--CCeEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFIN--GR----PLPASSRATTTFK--FGFISLDLLSIVLHDSGEYTVRVTNNS 71 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~--~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~y~C~~~~~~ 71 (90)
.+|++++|.|.+. +. +.+.+.|++. +. .+....++..... .....|.|.+++.+|.|.|.|.+.+..
T Consensus 13 ~~G~svtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 89 (126)
T 3moq_A 13 ETGESLTINCVLR--DASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYVF 89 (126)
T ss_dssp ETTCCEEEEEEEE--SCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEEE
T ss_pred eCCCCEEEEEEee--cCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEcC
Confidence 4699999999987 43 5678999974 21 2223345544332 345679999999999999999987643
No 298
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.03 E-value=5.2e-10 Score=61.74 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=49.9
Q ss_pred CCCceEEEEEEEccCCCCCc---EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSM---RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+.+.|.|.+. +.+++ .+.|++++..+...... .......|.+......|.|.|.|.+.|..|.
T Consensus 99 ~~G~~v~L~C~~~--g~~~~~~~~v~W~k~g~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 167 (450)
T 1z7z_I 99 PVGKNLTLRCQVE--GGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRP 167 (450)
T ss_dssp CTTSEEEEEEEEE--CCBCGGGEEEEEEETTEEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGG
T ss_pred eeCCeEEEEEEec--CCCCCcCcEEEEeeCCEEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCC
Confidence 4689999999998 88887 89999999876432110 0112236888999999999999999987653
No 299
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.03 E-value=6.3e-09 Score=53.44 Aligned_cols=66 Identities=14% Similarity=0.224 Sum_probs=48.3
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.| .+.+.|+++. .. + ....++....+ .....|.|.++...|
T Consensus 15 ~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 15 QPGKSLRLSCAAS--GFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 92 (247)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred ecCCcEEEEEEec--cccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHH
Confidence 5699999999987 776 6789999842 10 0 11245554432 335579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 93 ~G~Y~C~~~n~ 103 (247)
T 2ghw_B 93 TAVYYCARDRS 103 (247)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEeeecc
Confidence 99999999987
No 300
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.03 E-value=3.5e-09 Score=48.69 Aligned_cols=67 Identities=21% Similarity=0.382 Sum_probs=47.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c-------CCCCceEEEE---eCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L-------PASSRATTTF---KFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|+++.|.|.+. +.+ +.+.|++.. .. + ....++.... ......|.|.++...|.|.|.|.+
T Consensus 14 ~~G~~v~L~C~~~--~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (113)
T 1h5b_A 14 HEGTDSALRCNFT--TTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAA 90 (113)
T ss_dssp ETTCCEEEEEEES--SCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEE
T ss_pred ecCCcEEEEEEEC--CCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEE
Confidence 4699999999986 544 689999753 11 1 0123443332 224557999999999999999999
Q ss_pred EcCCc
Q psy16902 68 TNNSG 72 (90)
Q Consensus 68 ~~~~~ 72 (90)
.+..+
T Consensus 91 ~n~~~ 95 (113)
T 1h5b_A 91 EASSG 95 (113)
T ss_dssp ECSSS
T ss_pred ecCCC
Confidence 98754
No 301
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.02 E-value=3.7e-10 Score=57.43 Aligned_cols=78 Identities=10% Similarity=0.049 Sum_probs=50.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeE--EEEEcCCCCCCCeEEEEEEEcCCcceE--eEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFI--SLDLLSIVLHDSGEYTVRVTNNSGSAE--STA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~y~C~~~~~~~~~~--~~~ 78 (90)
.+|++++|.|.+. + +.+.+.|++++..+...... ........ .|.|.++...|.|.|.|.+.+..+... ...
T Consensus 21 ~~G~~vtL~C~~~--~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~ 96 (218)
T 1uct_A 21 PLDGSVKIQCQAI--R-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTL 96 (218)
T ss_dssp ETTCCEEEEECCC--T-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCE
T ss_pred CCCCCEEEEEEcC--C-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCE
Confidence 4689999999875 5 67899999987543211110 00011122 588999999999999999999765322 234
Q ss_pred EEEEec
Q psy16902 79 LLSVQG 84 (90)
Q Consensus 79 ~l~v~~ 84 (90)
.|.|.+
T Consensus 97 ~l~V~~ 102 (218)
T 1uct_A 97 ELVVTG 102 (218)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 555543
No 302
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.02 E-value=8.2e-09 Score=52.06 Aligned_cols=82 Identities=16% Similarity=0.294 Sum_probs=55.5
Q ss_pred CCCceEEEEEEEccCCCC-----CcEEEEeeCCEEc---------CC------CCceEEEE---eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP-----SMRVDWFINGRPL---------PA------SSRATTTF---KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~~~~---------~~------~~~~~~~~---~~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.| .+.+.|++++..+ .. ..+..+.. ..+...|.|.++...|
T Consensus 14 ~~G~~v~L~C~~~--~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 91 (222)
T 3sbw_C 14 EYGSNMTIECKFP--VEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQD 91 (222)
T ss_dssp ETTSCEEEEEECC--CCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGG
T ss_pred EcCCcEEEEeEec--CCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccccc
Confidence 4689999999975 555 3489999875321 10 12222221 1234579999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEEecCCC
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSVQGRRE 87 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v~~~~~ 87 (90)
.|.|.|.+.+ .+.......|.|..++.
T Consensus 92 ~G~Y~C~~~~-~~~~~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 92 AGVYRCMISY-GGADYKRITVKVNAPYN 118 (222)
T ss_dssp CEEEEEEEES-SSEEEEEEEEEEEBCCC
T ss_pred CeEEEEEEEe-CCCceeEEEEEEECCCC
Confidence 9999999998 55566666777765543
No 303
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.02 E-value=5e-09 Score=49.37 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=53.6
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeC--CE---Ec---C-------CCCceEEEE--eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFIN--GR---PL---P-------ASSRATTTF--KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~--~~---~~---~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. +.. ...+.|++. +. .+ . ...++.... ..+...|.|.++...|.|.|.
T Consensus 14 ~~G~~vtL~C~~s--~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 91 (129)
T 3rrq_A 14 TEGDNATFTCSFS--NTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYL 91 (129)
T ss_dssp ETTSCEEEEEECC--CCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEE
T ss_pred eCCCCEEEEeEec--CCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEE
Confidence 4699999999886 443 467899863 21 11 0 113554442 233567999999999999999
Q ss_pred EEEEcCCcce----EeEEEEEEecC
Q psy16902 65 VRVTNNSGSA----ESTALLSVQGR 85 (90)
Q Consensus 65 C~~~~~~~~~----~~~~~l~v~~~ 85 (90)
|.+.+..+.. .....|.|.+.
T Consensus 92 C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 92 CGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp EEEEECGGGCEEEECCCEEEEEECC
T ss_pred EEEEecCCCceeeEeceEEEEEecC
Confidence 9998865543 33456666643
No 304
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.02 E-value=6.8e-10 Score=55.83 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
..|+++.|.|.+. +.|.+.+.|+++. ..+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 12 ~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 89 (212)
T 1nfd_E 12 TVGETVKITCSGD--QLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSS 89 (212)
T ss_dssp ETTSCCCEEEEET--TGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEE
T ss_pred eCCCcEEEEEecC--CCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEE
Confidence 4689999999986 7777889999742 211 01245555444555679999999999999999999
Q ss_pred c
Q psy16902 69 N 69 (90)
Q Consensus 69 ~ 69 (90)
+
T Consensus 90 n 90 (212)
T 1nfd_E 90 Y 90 (212)
T ss_dssp E
T ss_pred c
Confidence 6
No 305
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.02 E-value=3.7e-09 Score=49.53 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=49.8
Q ss_pred CCCceEEEEEEEccCCCCCc----EEEEeeCC----------------EEcCC----CCceEEEEeC-----------Ce
Q psy16902 3 PQKRKIHFEARIEPVGDPSM----RVDWFING----------------RPLPA----SSRATTTFKF-----------GF 47 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~----~~~w~~~~----------------~~~~~----~~~~~~~~~~-----------~~ 47 (90)
..|+++.|.|.+. ..+.+ .+.|++.. ..+.. ..+..+.... ..
T Consensus 15 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~ 92 (128)
T 3r0n_A 15 QLGGTVELPCHLL--PPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQD 92 (128)
T ss_dssp CTTSCEEECCEEE--SCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSB
T ss_pred EcCCCEEEEEEee--cCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCC
Confidence 4689999999987 55444 78999862 22211 1233332111 13
Q ss_pred EEEEEcCCCCCCCeEEEEEEEc-CCcceEeEEEEE
Q psy16902 48 ISLDLLSIVLHDSGEYTVRVTN-NSGSAESTALLS 81 (90)
Q Consensus 48 ~~~~~~~~~~~~~g~y~C~~~~-~~~~~~~~~~l~ 81 (90)
..|.|.++...|.|.|.|.+.. ..|.......|.
T Consensus 93 ~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~ 127 (128)
T 3r0n_A 93 ATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLR 127 (128)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEE
Confidence 3699999999999999998765 446555555554
No 306
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.02 E-value=3.3e-09 Score=53.28 Aligned_cols=65 Identities=12% Similarity=0.171 Sum_probs=45.0
Q ss_pred CCCceEEEEEEEccCC----CCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVG----DPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~----~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.+|+.+.|.|.+. + .|.|.+.|++++....... . .....+.+......+.|.|.|.+.|..+...
T Consensus 136 ~~G~~v~L~C~~~--~~~~~~p~p~v~W~~~~~~~~~~~-~-----~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~ 204 (214)
T 2zg1_A 136 ESGRPTRLSCSLP--GSCEAGPPLTFSWTGNALSPLDPE-T-----TRSSELTLTPRPEDHGTNLTCQMKRQGAQVT 204 (214)
T ss_dssp CTTCCEEEEEECT--TCCSCSSCCEEEEESSTTSSSCSS-C-----CCSSEEEECCCTTCCSCEEEEEEECC----C
T ss_pred cCCCeEEEEEEec--cCCCCCCCceEEEeCCCCccCCCC-c-----eeEEEEEEecccHHcCcEEEEEEEeCCCCcc
Confidence 4688999999886 5 3789999999875432211 1 1123578888888889999999999754433
No 307
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.02 E-value=2e-09 Score=54.59 Aligned_cols=65 Identities=14% Similarity=0.211 Sum_probs=45.5
Q ss_pred CCceE-EEEEEE-ccCCCCCcEEEEeeCCEEcCCCC----ceEEEEe----CC-----eEEEEEcCCCCCCCeEEEEEEE
Q psy16902 4 QKRKI-HFEARI-EPVGDPSMRVDWFINGRPLPASS----RATTTFK----FG-----FISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 4 ~g~~~-~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~----~~-----~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.|+.+ .|.|.+ . +.|.|.+.|++++..+.... +...... .. ...|.+......+.|.|.|.+.
T Consensus 132 ~g~~~~~l~C~~~~--~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~ 209 (231)
T 2pet_A 132 EDSAQEIATCNSRN--GNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAH 209 (231)
T ss_dssp CCSEEEEEEEEEEE--EBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEE
T ss_pred CCCceEEEEEEeEC--cccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEE
Confidence 57777 999998 6 88999999999999876544 3332211 00 1346666455556999999999
Q ss_pred cC
Q psy16902 69 NN 70 (90)
Q Consensus 69 ~~ 70 (90)
|.
T Consensus 210 n~ 211 (231)
T 2pet_A 210 YS 211 (231)
T ss_dssp EE
T ss_pred cC
Confidence 94
No 308
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.02 E-value=5.5e-09 Score=54.43 Aligned_cols=81 Identities=14% Similarity=0.115 Sum_probs=55.1
Q ss_pred CCCceEEEEEEEccCCCC------CcEEEEeeCC--EE---c-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDP------SMRVDWFING--RP---L-P--------ASSRATTTFKFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~------~~~~~w~~~~--~~---~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. .. + . ...++..........|.|.++...|.|.
T Consensus 18 ~~G~~v~L~C~~~--~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~ 95 (264)
T 2gjj_A 18 SVGEKVTMTCKSS--QTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAV 95 (264)
T ss_dssp ETTCCEEEEEEES--SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred cCCCcEEEEeEcC--CcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEE
Confidence 4689999999987 766 6789999842 11 1 0 1245555444455679999999999999
Q ss_pred EEEEEEcCCcc-eEeEEEEEEecC
Q psy16902 63 YTVRVTNNSGS-AESTALLSVQGR 85 (90)
Q Consensus 63 y~C~~~~~~~~-~~~~~~l~v~~~ 85 (90)
|.|.+.+..+. ......|.|..+
T Consensus 96 Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 96 YYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp EEEEECSSSSCEECCCEEEEEECC
T ss_pred EEEEEecCCccEecCCEEEEEEcC
Confidence 99999886442 122335555543
No 309
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.02 E-value=1.6e-09 Score=55.29 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=48.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-----Ec---------CCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-----PL---------PASSRATTTF--KFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-----~~---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|+++.|.|.+. +.|.+.+.|++++. .+ ....++.... ......|.|.++...|.|.|.|.
T Consensus 140 ~~G~~v~L~C~~~--~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 217 (238)
T 2p1y_A 140 WEGETAILNCSYE--NSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCA 217 (238)
T ss_dssp ETTSCEEEEEECC--CTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEE
T ss_pred eCCCeEEEEEEEe--cCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEE
Confidence 4689999999987 88889999998631 11 0112333321 22345799999999999999999
Q ss_pred EEcCC
Q psy16902 67 VTNNS 71 (90)
Q Consensus 67 ~~~~~ 71 (90)
+.|..
T Consensus 218 a~n~~ 222 (238)
T 2p1y_A 218 AIDTN 222 (238)
T ss_dssp EEETT
T ss_pred EeeCC
Confidence 99873
No 310
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.02 E-value=9.1e-11 Score=63.12 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=58.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCe-EEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSG-EYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. +.|.|.+.|++++..+...... ........+.+..+...|.| .|.|.+.+..|.......+.
T Consensus 171 ~~G~~v~L~C~~~--g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~ 246 (347)
T 2ifg_A 171 DVGDDVLLRCQVE--GRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVN 246 (347)
T ss_dssp BTTCCEEEEEEEE--CSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCC
T ss_pred eCCCcEEEEEEEe--cCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEE
Confidence 5689999999998 9999999999988653321100 01223456899999999999 99999999887666655555
Q ss_pred EecCC
Q psy16902 82 VQGRR 86 (90)
Q Consensus 82 v~~~~ 86 (90)
|..+|
T Consensus 247 V~~~P 251 (347)
T 2ifg_A 247 VSFPA 251 (347)
T ss_dssp CBEEE
T ss_pred EcCCC
Confidence 44433
No 311
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.01 E-value=2.6e-09 Score=52.85 Aligned_cols=63 Identities=11% Similarity=0.171 Sum_probs=45.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+|+++.|.|.+. + +++.+.|++++..+........ ....|.+..+...|.|.|.|.+.|...
T Consensus 106 ~~G~~v~l~C~~~--~-~~~~~~w~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 106 SSGGDVTLQCQTR--Y-GFDQFALYKEGDPAPYKNPERW----YRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCTTCEEEEEECS--S-CCCEEEEEECCCCTTSCCCCEE----EEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred cCCCcEEEEEEcC--C-CCcEEEEEECCCcCcceecCCC----ceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 4699999999864 4 4578999999876654222111 122367788999999999999999743
No 312
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.01 E-value=8.4e-09 Score=47.16 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=46.7
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCEE--cC-----------CCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGRP--LP-----------ASSRATTTF--KFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~--~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|.+. .. ..+.+.|++.... .. ...++.... ......|.|.++...|.|.|.|.
T Consensus 9 ~~G~~v~L~C~~~--~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 86 (110)
T 2q87_A 9 PVGGSLSVQCPYE--KEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 86 (110)
T ss_dssp CTTSCEEEEEECC--GGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEE
T ss_pred eCCCcEEEEeEec--CCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEE
Confidence 5799999999875 33 3468999975421 10 113444432 22345799999999999999999
Q ss_pred EEcCC
Q psy16902 67 VTNNS 71 (90)
Q Consensus 67 ~~~~~ 71 (90)
+.+..
T Consensus 87 ~~~~~ 91 (110)
T 2q87_A 87 VDTPW 91 (110)
T ss_dssp EECTT
T ss_pred EecCc
Confidence 99875
No 313
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.01 E-value=4.8e-09 Score=48.33 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=47.8
Q ss_pred CCCceEEEEEEEccCCCC------CcEEEEeeCC--E---Ec---------CCCCceEEEEeCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDP------SMRVDWFING--R---PL---------PASSRATTTFKFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~------~~~~~w~~~~--~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|++++|.|.+. +.+ .+.+.|++.. . .+ ....++..........|.|.++...|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 91 (114)
T 1eeq_A 14 SLGERATINCKSS--QSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAV 91 (114)
T ss_dssp CTTSCEEEEEEES--SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred cCCCeEEEEEEcC--CCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccCEE
Confidence 5799999999986 555 3679999753 1 11 01245554444455679999999999999
Q ss_pred EEEEEEcC
Q psy16902 63 YTVRVTNN 70 (90)
Q Consensus 63 y~C~~~~~ 70 (90)
|.|.+.+.
T Consensus 92 Y~C~~~~~ 99 (114)
T 1eeq_A 92 YYCQQYYS 99 (114)
T ss_dssp EEEEECSS
T ss_pred EEEEEeeC
Confidence 99998875
No 314
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.00 E-value=6.8e-09 Score=53.67 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeC--CEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFIN--GRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. +.+.+ .+.|++. +..+. ...++..........|.|.++...|.|.|.|.+
T Consensus 154 ~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 231 (257)
T 3gkz_A 154 SPGEKVTLTCSAS--SSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQ 231 (257)
T ss_dssp CTTCCEEEEEEES--SCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred eCCCcEEEEEEEc--cCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEE
Confidence 4689999999997 77777 8999973 21110 113444444445567999999999999999999
Q ss_pred EcCCcc-eEeEEEEEEe
Q psy16902 68 TNNSGS-AESTALLSVQ 83 (90)
Q Consensus 68 ~~~~~~-~~~~~~l~v~ 83 (90)
.+.... ......|.|.
T Consensus 232 ~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 232 WSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp CSSSSCEECCCEEEEEC
T ss_pred ccCCceEEcCCEEEEEE
Confidence 875332 2223355554
No 315
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.00 E-value=2.5e-08 Score=50.32 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=48.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-----EEc-------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-----RPL-------------PASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+.....+.+.+.|++.. ..+ ....++......+...|.|.++...|.|.|.
T Consensus 12 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (215)
T 3nl4_H 12 TPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTATYF 91 (215)
T ss_dssp CTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEEEE
T ss_pred cCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEEEE
Confidence 5699999999986112346789998632 111 0123454444455567999999999999999
Q ss_pred EEEEcCCc
Q psy16902 65 VRVTNNSG 72 (90)
Q Consensus 65 C~~~~~~~ 72 (90)
|.+.+..+
T Consensus 92 C~~~~~~~ 99 (215)
T 3nl4_H 92 CVRKYGSE 99 (215)
T ss_dssp EEEECSSS
T ss_pred EEEecCCC
Confidence 99998744
No 316
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.00 E-value=4.4e-09 Score=54.35 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=51.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC---cceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS---GSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~---~~~~~~~~ 79 (90)
.+|++++|.|... + +.+.+.|++++..+.. ..........+.+.++...|.|.|.|.+.+.. ........
T Consensus 114 ~~G~~vtL~C~~~--~-~~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~ 186 (242)
T 1p6f_A 114 ISGEKVTFYCRLD--T-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVK 186 (242)
T ss_dssp ETTCEEEEEEECT--T-SCSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEE
T ss_pred CCCCcEEEEEecC--C-CCCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEE
Confidence 4699999999874 4 4568999999864432 11122344568999999999999999998753 12223345
Q ss_pred EEEec
Q psy16902 80 LSVQG 84 (90)
Q Consensus 80 l~v~~ 84 (90)
|.|.+
T Consensus 187 l~V~~ 191 (242)
T 1p6f_A 187 LLVTG 191 (242)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66654
No 317
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.99 E-value=1.3e-09 Score=53.42 Aligned_cols=60 Identities=20% Similarity=0.301 Sum_probs=45.8
Q ss_pred CCCceEEEEEEEccCCCCCc-EEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-RVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.+|+++.|.|.+. +.+.+ .+.|++++..+... ...|.+.++...|.|.|.|.+.+..+..
T Consensus 17 ~~G~~v~L~C~~~--~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~~~~s~ 77 (176)
T 1f2q_A 17 FKGENVTLTCNGN--NFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQVNESE 77 (176)
T ss_dssp ETTCCEEEECCTT--CC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTTSSCCC
T ss_pred ecCCcEEEEEeCC--CCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCCccccc
Confidence 4689999999876 77665 58999999876542 1258899999999999999998865543
No 318
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.99 E-value=9e-09 Score=53.61 Aligned_cols=69 Identities=12% Similarity=0.137 Sum_probs=50.2
Q ss_pred CCCCceEEEEEEEccCCCC-----CcEEEEeeCC--E---EcC---------CCCceEEEEeCCeEEEEEcCCCCCCCeE
Q psy16902 2 DPQKRKIHFEARIEPVGDP-----SMRVDWFING--R---PLP---------ASSRATTTFKFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~--~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 62 (90)
..+|+++.|.|.+. +.+ .+.+.|++.. . .+. ...++..........|.|.++...|.|.
T Consensus 27 v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 104 (268)
T 1x9q_A 27 VSLGDQASISCRSS--QSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGV 104 (268)
T ss_dssp CCTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ecCCCCEEEEeEec--CCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEE
Confidence 35799999999987 665 5889999752 1 110 1245555444455679999999999999
Q ss_pred EEEEEEcCCc
Q psy16902 63 YTVRVTNNSG 72 (90)
Q Consensus 63 y~C~~~~~~~ 72 (90)
|.|.+.+..+
T Consensus 105 Y~C~~~~~~~ 114 (268)
T 1x9q_A 105 YFCSQSTHVP 114 (268)
T ss_dssp EEEEECSSSS
T ss_pred EEEEEecCCC
Confidence 9999988643
No 319
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.99 E-value=1.2e-08 Score=51.57 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=48.3
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CEEcC-----------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GRPLP-----------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+ .+.+.|+++ +..+. ...++..... .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 13 KPGETVKISCKAS--GYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNED 90 (219)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEEe--CcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 4689999999987 654 688999986 22110 1234444322 234579999999999
Q ss_pred CeEEEEEEEcCC
Q psy16902 60 SGEYTVRVTNNS 71 (90)
Q Consensus 60 ~g~y~C~~~~~~ 71 (90)
.|.|.|.+.+..
T Consensus 91 ~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 91 MATYFCARGTTI 102 (219)
T ss_dssp CEEEEEEEEETT
T ss_pred CEEEEEEEeccC
Confidence 999999999875
No 320
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.99 E-value=1.2e-08 Score=52.91 Aligned_cols=68 Identities=22% Similarity=0.267 Sum_probs=49.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc------C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL------P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~------~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. ..+ . ...++..... .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (256)
T 1nqb_A 13 KPGASVKLSCKAS--GYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSED 90 (256)
T ss_dssp CTTCCEEEEEEEC--SSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEec--cccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhh
Confidence 5699999999986 664 6789999842 111 0 1235544432 345579999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 sG~Y~C~~~n~~g 103 (256)
T 1nqb_A 91 SAVYYCARYDYYG 103 (256)
T ss_dssp CEEEEEEECCTTS
T ss_pred CEEEEEEEeeccC
Confidence 9999999998754
No 321
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.99 E-value=3e-10 Score=57.48 Aligned_cols=84 Identities=18% Similarity=0.265 Sum_probs=54.0
Q ss_pred CCCceEEEEEEEccCCCCCc----EEEEeeCCEEcCC-------------CCceEEEE-----eCCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM----RVDWFINGRPLPA-------------SSRATTTF-----KFGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~----~~~w~~~~~~~~~-------------~~~~~~~~-----~~~~~~~~~~~~~~~~~ 60 (90)
..|+++.|.|.+. .+.+.+ .+.|++++..... ..+..+.. ..+...|.|.++...|.
T Consensus 12 ~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 90 (221)
T 3eow_R 12 FLGDSVTLPCYLQ-VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDE 90 (221)
T ss_dssp CCSSCCEEECCCC-CCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCC
T ss_pred EeCCCEEEEeeec-cCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHC
Confidence 4699999999874 123333 4899998642111 22333332 11234699999999999
Q ss_pred eEEEEEEEcCC-cceEeEEEEEEecCCC
Q psy16902 61 GEYTVRVTNNS-GSAESTALLSVQGRRE 87 (90)
Q Consensus 61 g~y~C~~~~~~-~~~~~~~~l~v~~~~~ 87 (90)
|.|.|.+.+.. +.......|.|.++|.
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~L~V~~~P~ 118 (221)
T 3eow_R 91 GSYTCLFVTFPQGSRSVDIWLRVLAKPQ 118 (221)
T ss_dssp SCBEEEEEESSSCSCEEECCCCCCCCCE
T ss_pred eEEEEEEEeCCCCceEEEEEEEEEECCC
Confidence 99999999865 5555555555555443
No 322
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.99 E-value=3.4e-09 Score=48.46 Aligned_cols=66 Identities=14% Similarity=0.216 Sum_probs=46.5
Q ss_pred CCCceEEEEEE-EccCCCC-CcEEEEeeCCEEc----C--------CCCceEEE--EeCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEAR-IEPVGDP-SMRVDWFINGRPL----P--------ASSRATTT--FKFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~-~~~~~~~-~~~~~w~~~~~~~----~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|. +. +.+ .+.+.|++..... . ...++... .......|.|.++...|.|.|.|.
T Consensus 13 ~~G~~v~L~C~v~~--~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 90 (109)
T 1pew_A 13 SPGKTVTISCTRSS--GNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQ 90 (109)
T ss_dssp CTTSCEEEEEEESS--SCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred cCCCCEEEEEEeCC--CCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEE
Confidence 56999999999 65 444 4779999875211 0 12455544 233456799999999999999999
Q ss_pred EEcC
Q psy16902 67 VTNN 70 (90)
Q Consensus 67 ~~~~ 70 (90)
+.+.
T Consensus 91 ~~~~ 94 (109)
T 1pew_A 91 SYDA 94 (109)
T ss_dssp EEET
T ss_pred EEeC
Confidence 8874
No 323
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.99 E-value=3e-09 Score=48.36 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=50.7
Q ss_pred CCCceEEEEEEEccCCCCC---cEEEEeeCCEEc----------C-------CCCceEEEE--eCCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPS---MRVDWFINGRPL----------P-------ASSRATTTF--KFGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~~----------~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~ 60 (90)
..|+++.|.|.+. +.+. ..+.|++..... . ...++.... ..+...|.|.+++..|.
T Consensus 7 ~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~ 84 (109)
T 2oyp_A 7 EVGKNAYLPCSYT--LPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDH 84 (109)
T ss_dssp CTTSCEEECCBCC--CCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGC
T ss_pred EcCCCEEEEEEeE--CCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhC
Confidence 5699999999876 4432 348999854210 0 112322221 11224699999999999
Q ss_pred eEEEEEEEcCCcceEeEEEEEEe
Q psy16902 61 GEYTVRVTNNSGSAESTALLSVQ 83 (90)
Q Consensus 61 g~y~C~~~~~~~~~~~~~~l~v~ 83 (90)
|.|.|.+.+..+.......|.|.
T Consensus 85 G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 85 GTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEE
T ss_pred eEEEEEEEcCCcccceEEEEEEE
Confidence 99999999876555555555543
No 324
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.98 E-value=2.5e-08 Score=46.31 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=53.1
Q ss_pred CCCceEEEEEEEccCCCC---CcEEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP---SMRVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|++++|.|.+. +.+ ...+.|++.. . .+ . ...++..........|.|.++...|.|.|.|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y~C 90 (120)
T 1oaq_L 13 SPGETVTLTCRSS--TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFC 90 (120)
T ss_dssp CTTCEEEEEEEET--TBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred cCCCCEEEEEEeC--CCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEEEE
Confidence 5799999999986 544 5779998742 1 11 0 1245555444555679999999999999999
Q ss_pred EEEcCCcc-eEeEEEEEEec
Q psy16902 66 RVTNNSGS-AESTALLSVQG 84 (90)
Q Consensus 66 ~~~~~~~~-~~~~~~l~v~~ 84 (90)
.+.+.... ......|.|.+
T Consensus 91 ~~~~~~~~~fg~gt~L~V~~ 110 (120)
T 1oaq_L 91 ALWYSNHLVFGGGTKLTVLG 110 (120)
T ss_dssp EEEETTEEEECCCEEEEECC
T ss_pred EEccCCCcEECCCEEEEEcC
Confidence 98875321 11233566654
No 325
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.98 E-value=1.5e-08 Score=46.63 Aligned_cols=65 Identities=12% Similarity=0.223 Sum_probs=46.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE----cCCCCceEEEEe--CCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP----LPASSRATTTFK--FGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
.+|++++|.|.+. +.+ .+.+.|++.. .. +....++..... .....|.|.++...|.|.|.|.+.+
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 13 ETGESLTINCVLR--DASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp CTTCCEEEEEEEC--SCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred ecCCCEEEEEEEC--CCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 5799999999986 544 5679999752 21 222345544322 3456799999999999999999887
No 326
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.98 E-value=1.8e-08 Score=52.68 Aligned_cols=66 Identities=14% Similarity=0.145 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc-----------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL-----------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++++ ..+ ....++....+ .....|.|.++...|
T Consensus 147 ~~G~~v~L~C~~~--g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 224 (276)
T 3auv_A 147 QPGGSLRLSCAAS--GFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAED 224 (276)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEec--CccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhH
Confidence 4689999999987 765 5889999863 111 11235544432 234569999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.|.
T Consensus 225 sG~Y~C~a~n~ 235 (276)
T 3auv_A 225 TAVYYCARFVF 235 (276)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEEcC
Confidence 99999999997
No 327
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.98 E-value=1.2e-08 Score=46.85 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=47.4
Q ss_pred CCCceEEEEEEEccCCCC-----CcEEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-----SMRVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-----~~~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|++++|.|.+. +.+ .+.+.|++.. . .+ . ...++..........|.|.++...|.|.|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y 91 (113)
T 1dlf_L 14 SLGNQASISCRSS--QSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVY 91 (113)
T ss_dssp CTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred cCCCCEEEEEEcc--ccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHCEEE
Confidence 5699999999986 544 4779998743 1 11 0 12455544444556799999999999999
Q ss_pred EEEEEcC
Q psy16902 64 TVRVTNN 70 (90)
Q Consensus 64 ~C~~~~~ 70 (90)
.|.+.+.
T Consensus 92 ~C~~~~~ 98 (113)
T 1dlf_L 92 FCSQSTH 98 (113)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9998875
No 328
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.97 E-value=2.1e-09 Score=49.52 Aligned_cols=79 Identities=23% Similarity=0.132 Sum_probs=49.8
Q ss_pred CCCceEEEEEEEccCC-CCCcEEEEeeCCEE--------cC---------CCCceEEEE--eCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSMRVDWFINGRP--------LP---------ASSRATTTF--KFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~--------~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|++++|.|.+. . .....+.|++.... +. ...++.... ......|.|.+++..|.|.
T Consensus 10 ~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 87 (116)
T 2or8_A 10 VVGHPVTLPCTYS--TYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGL 87 (116)
T ss_dssp ETTSCEEECCBCC--CTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEE
T ss_pred EeCCcEEEEEEee--CCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEE
Confidence 4699999999875 3 33567999987521 00 112222210 1123469999999999999
Q ss_pred EEEEEEcCCcce--EeEEEEEEe
Q psy16902 63 YTVRVTNNSGSA--ESTALLSVQ 83 (90)
Q Consensus 63 y~C~~~~~~~~~--~~~~~l~v~ 83 (90)
|.|.+.+..+.. .....|.|.
T Consensus 88 Y~C~v~~~~~~~~~~~~~~l~V~ 110 (116)
T 2or8_A 88 YCCRVEIPGWFNDQKVTFSLQVK 110 (116)
T ss_dssp EEEEECCSSTTCCEEEEEEEEEE
T ss_pred EEEEEEcCCcccccEEEEEEEEC
Confidence 999998865433 444455553
No 329
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.97 E-value=3.6e-10 Score=56.39 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=51.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC-c--ceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS-G--SAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~-~--~~~~~~~ 79 (90)
.+|+++.|.|.+. +.|. .+.|++++..+......... ......|.|.++...|.|.|.|.+.|.. + .......
T Consensus 17 ~~G~~v~L~C~~~--~~~~-~~~W~k~g~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~ 92 (198)
T 1ugn_A 17 TQGSPVTLRCQGG--QETQ-EYRLYREKKTAPWITRIPQE-LVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLE 92 (198)
T ss_dssp ETTCCEEEEEECC--TTCC-CEEEEESSSCCHHHHTSCHH-HHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEE
T ss_pred cCCCcEEEEEEec--CCCc-EEEEEECCcccccccccccc-CCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEE
Confidence 4689999999886 6654 69999998755211000000 0112258899999999999999999876 4 2234456
Q ss_pred EEEec
Q psy16902 80 LSVQG 84 (90)
Q Consensus 80 l~v~~ 84 (90)
|.|.+
T Consensus 93 l~V~~ 97 (198)
T 1ugn_A 93 LVVTG 97 (198)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 66654
No 330
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.97 E-value=1.2e-08 Score=50.92 Aligned_cols=59 Identities=15% Similarity=0.237 Sum_probs=42.0
Q ss_pred Cc-eEEEEEEEccCCC-CCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCC-CCCeEEEEEEEcCCcceEe
Q psy16902 5 KR-KIHFEARIEPVGD-PSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVL-HDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 5 g~-~~~l~C~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~y~C~~~~~~~~~~~ 76 (90)
|. .+.|.|.+. +. |.|.+.|++++..+.... .+.+..... .|.|.|.|.+.|..+....
T Consensus 123 g~~~v~L~C~~~--g~~p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 123 MTCELHLTCSVE--DADDNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp SSEEEEEEEEEE--SCCTTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred CCceEEEEEEEe--cCCCceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 44 799999997 74 579999999987653322 133332233 4799999999999887644
No 331
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.97 E-value=7.6e-09 Score=54.60 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=48.5
Q ss_pred CCCceEEEEEEEccCCCCCc------EEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSM------RVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~------~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|+++.|.|.+. +.+.+ .+.|+++. . .+ . ...++..........|.|.++...|.|.
T Consensus 172 ~~G~~v~L~C~~~--~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 249 (291)
T 2gki_A 172 SAGEKVTMSCKSS--QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAV 249 (291)
T ss_dssp ETTSCEEEEEEES--SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred cCCCcEEEEEEcC--CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEE
Confidence 4689999999987 77665 89999852 1 11 0 1234444334445679999999999999
Q ss_pred EEEEEEcCC
Q psy16902 63 YTVRVTNNS 71 (90)
Q Consensus 63 y~C~~~~~~ 71 (90)
|.|.+.+..
T Consensus 250 Y~C~a~~~~ 258 (291)
T 2gki_A 250 YYCKQSYYH 258 (291)
T ss_dssp EEEEEEETT
T ss_pred EEEEEccCC
Confidence 999998853
No 332
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.96 E-value=1.5e-08 Score=51.95 Aligned_cols=64 Identities=13% Similarity=0.229 Sum_probs=45.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEee--------------CCEEcC-C---CCceEEEEe-CCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFI--------------NGRPLP-A---SSRATTTFK-FGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~--------------~~~~~~-~---~~~~~~~~~-~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.| .. +.+.+.+.|++ ++.... . ..++..... .....|.|.++...|.|.|
T Consensus 15 ~~G~~v~L~C-~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 91 (245)
T 4ei6_B 15 DMGQMVTLNC-DP--VSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVY 91 (245)
T ss_dssp ETTCCEEEEE-EC--CTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEE
T ss_pred cCCCCEEEEE-Ec--CCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEE
Confidence 4699999999 44 78889999998 221111 1 145544432 3345799999999999999
Q ss_pred EEEEEc
Q psy16902 64 TVRVTN 69 (90)
Q Consensus 64 ~C~~~~ 69 (90)
.|.+.+
T Consensus 92 ~C~~~~ 97 (245)
T 4ei6_B 92 FCASSF 97 (245)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 999985
No 333
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.96 E-value=9.4e-09 Score=53.23 Aligned_cols=68 Identities=12% Similarity=0.138 Sum_probs=48.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec----------CCCCceEEE--EeCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL----------PASSRATTT--FKFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|+++.|.|.+. +.+.+.+.|++.. . .+ ....++... .......|.|.++...|.|.|.|
T Consensus 16 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 93 (256)
T 3tf7_C 16 SEGASLQLRCKYS--YSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFC 93 (256)
T ss_dssp ETTSCEEECCEEE--CSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEE
T ss_pred cCCCeEEEEEEeC--CCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEE
Confidence 4689999999998 7899999999732 1 00 011233332 12334569999999999999999
Q ss_pred EEEcCCc
Q psy16902 66 RVTNNSG 72 (90)
Q Consensus 66 ~~~~~~~ 72 (90)
.+.+..+
T Consensus 94 ~~~~~~~ 100 (256)
T 3tf7_C 94 AVSAKGT 100 (256)
T ss_dssp EEECTTC
T ss_pred EEecCCC
Confidence 9998643
No 334
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.96 E-value=1.1e-09 Score=62.30 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=57.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC------------CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA------------SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|++++|.|.+. .+.|.+.+.|++++..+.. ..+....... .|.|.+++..|.|.|.|.+.+.
T Consensus 379 ~~G~~v~L~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~~n~ 454 (581)
T 3o3u_N 379 RIGEPLVLKCKGA-PKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQAMNR 454 (581)
T ss_dssp ETTSCEEECCTTC-CSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEEECT
T ss_pred ecCCcEEEeeeec-CCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEEEcC
Confidence 4689999999872 2788899999988642110 1122222111 5899999999999999999998
Q ss_pred Ccce-EeEEEEEEecCC
Q psy16902 71 SGSA-ESTALLSVQGRR 86 (90)
Q Consensus 71 ~~~~-~~~~~l~v~~~~ 86 (90)
.+.. .....|.|..+|
T Consensus 455 ~~~~~~~~~~l~V~~~~ 471 (581)
T 3o3u_N 455 NGKETKSNYRVRVYQIP 471 (581)
T ss_dssp TSCEEEEEEEEEEEBCC
T ss_pred CCceeEEEEEEEEEcCC
Confidence 8876 566677776543
No 335
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.96 E-value=1.7e-09 Score=57.40 Aligned_cols=79 Identities=11% Similarity=0.037 Sum_probs=43.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc-----eEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-----AES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-----~~~ 76 (90)
.+|+++.|.|.+. .+.+.+.|++++..+......... .......|.+..+. |.|.|.|.+.+..+. ...
T Consensus 231 ~~G~~v~L~C~~~---~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~ 305 (316)
T 3vh8_G 231 QAGESVTLSCSSR---SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSD 305 (316)
T ss_dssp CTTSCCEEEEEES---SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCC
T ss_pred cCCCcEEEEEECC---CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCC
Confidence 4699999999884 577899999998754421110000 11112457888888 999999999997553 233
Q ss_pred EEEEEEecCC
Q psy16902 77 TALLSVQGRR 86 (90)
Q Consensus 77 ~~~l~v~~~~ 86 (90)
...|.|.+.|
T Consensus 306 ~~~l~V~g~p 315 (316)
T 3vh8_G 306 PLLVSVTGNP 315 (316)
T ss_dssp CEEC------
T ss_pred cEEEEEeCCC
Confidence 3455565554
No 336
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.96 E-value=1.2e-08 Score=47.63 Aligned_cols=81 Identities=22% Similarity=0.180 Sum_probs=51.2
Q ss_pred CCCceEEEEEEEccCCCCC---cEEEEeeCCEEcC--------C----------CCceEEEE---eCCeEEEEEcCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPS---MRVDWFINGRPLP--------A----------SSRATTTF---KFGFISLDLLSIVLH 58 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~~~--------~----------~~~~~~~~---~~~~~~~~~~~~~~~ 58 (90)
..|++++|.|.+. +.+. ..+.|++...... . ..|..+.. ..+..+|.|.+++..
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 90 (123)
T 4gjt_B 13 VLGQDAKLPCFYR--GDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 90 (123)
T ss_dssp CTTSEEEECCEEC--CCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSS
T ss_pred EcCCCEEEEEEEe--CCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChH
Confidence 5699999999986 4433 4578987532100 0 01222211 112345999999999
Q ss_pred CCeEEEEEEEc-CCcceEeEEEEEEecC
Q psy16902 59 DSGEYTVRVTN-NSGSAESTALLSVQGR 85 (90)
Q Consensus 59 ~~g~y~C~~~~-~~~~~~~~~~l~v~~~ 85 (90)
|.|.|.|.+.+ ..|.......|.|.+.
T Consensus 91 DsG~Y~C~v~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 91 DEGEYECRVSTFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp SCSEEEEEEEESSSCEEEEEEEEEC---
T ss_pred HCEEEEEEEEECCCCeEEeEEEEEEEEC
Confidence 99999998875 4667777778877653
No 337
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.95 E-value=5e-09 Score=47.90 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=51.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC-EEcC------------C--CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING-RPLP------------A--SSRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~-~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
..|++++|.|.+. .+.+.+.+.|++.. ..+. . ..++.+. .....|.|.+++..|.|.|.|.+
T Consensus 16 ~~G~~v~L~C~~~-~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~v 92 (110)
T 2ptt_A 16 YTGSNVTLKIHKD-PLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLE--ENNGALHISNVRKEDKGTYYMRV 92 (110)
T ss_dssp ETTSCEEECSCSS-CCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEEC--TTTCCEEESSCCGGGCEEEEEEE
T ss_pred ecCCcEEEeCCcc-CCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEe--CCCccEEECCCCcccCeEEEEEE
Confidence 4689999999872 15667889999842 1110 0 1233332 12346999999999999999999
Q ss_pred EcCCcceEeEEEEEEec
Q psy16902 68 TNNSGSAESTALLSVQG 84 (90)
Q Consensus 68 ~~~~~~~~~~~~l~v~~ 84 (90)
.+.. .......|.|.+
T Consensus 93 ~~~~-~~~~~~~L~V~d 108 (110)
T 2ptt_A 93 LRET-ENELKITLEVFD 108 (110)
T ss_dssp ESSS-BCCEEEEEEEEC
T ss_pred EcCC-CcEEEEEEEEEc
Confidence 8765 333355666654
No 338
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.95 E-value=4e-09 Score=55.08 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=55.0
Q ss_pred CCCceEEEEEEEccCCCCCcE-EEEee-CCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE-cCCcceEeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMR-VDWFI-NGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT-NNSGSAESTAL 79 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~-~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~-~~~~~~~~~~~ 79 (90)
.+|+.+.|.|.+. +.+.+. +.|++ ++..+....++...... .+.+..+...|.|.|.|.+. +..+.......
T Consensus 102 ~~g~~v~L~C~~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~ 176 (289)
T 3ejj_X 102 VEGQEAVLPCLIT--DPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIW 176 (289)
T ss_dssp ETTSCEEECEEES--CGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ecCCceEeEEEcc--CCCcceEEEEEecCCeecCCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEE
Confidence 4588999999987 766655 99985 66666655555443222 48899999999999999998 54455555566
Q ss_pred EEEe
Q psy16902 80 LSVQ 83 (90)
Q Consensus 80 l~v~ 83 (90)
+.|.
T Consensus 177 l~V~ 180 (289)
T 3ejj_X 177 LKVN 180 (289)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 339
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.95 E-value=8.2e-09 Score=50.17 Aligned_cols=67 Identities=27% Similarity=0.398 Sum_probs=48.6
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
.+|+.+.|.|.+. +.| .+.+.|++++..+..... .+.+.++...|.|.|.|.+.+..... ...+.
T Consensus 17 ~~G~~v~l~C~~~--~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~~~s~--~~~l~ 82 (170)
T 3ry4_A 17 LQEDSVTLTCQGA--RSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQTSLSD--PVHLT 82 (170)
T ss_dssp ETTCEEEEEEESC--CCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTSBCCC--CEEEE
T ss_pred ECCCcEEEEEEec--CCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCCCceE--eEEEE
Confidence 4689999999986 665 678999999988765422 13456788899999999998754433 33444
Q ss_pred Ee
Q psy16902 82 VQ 83 (90)
Q Consensus 82 v~ 83 (90)
|.
T Consensus 83 v~ 84 (170)
T 3ry4_A 83 VL 84 (170)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 340
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.95 E-value=5.9e-09 Score=52.19 Aligned_cols=65 Identities=5% Similarity=-0.080 Sum_probs=44.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|++++|.|.+. .+.+.+.|++++..+...... ..........+.|.++...|.|.|.|.+.+.
T Consensus 20 ~~G~~v~L~C~~~---~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 20 KSEETVILQCWSD---VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVT 85 (201)
T ss_dssp ETTCCEEEEEEES---SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred CCCCcEEEEEecc---CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecC
Confidence 4799999999984 367899999988643211100 0000112346899999999999999999764
No 341
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.95 E-value=1.2e-08 Score=53.01 Aligned_cols=79 Identities=11% Similarity=0.092 Sum_probs=50.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEE------------cCC---C-CceEEEE-eCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRP------------LPA---S-SRATTTF-KFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~------------~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~g~y 63 (90)
..|+++.|.|.+ ..+.+.+.|++. +.. ... . .++.... ..+...|.|.++...|.|.|
T Consensus 39 ~~G~~v~L~C~~---~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 115 (268)
T 3pl6_D 39 EKGKYVELRCDP---ISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVY 115 (268)
T ss_dssp ETTCCEEEEEBC---BTTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEE
T ss_pred cCCCCEEEEEEe---CCCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEE
Confidence 468999999986 357789999982 111 000 0 3444432 12345799999999999999
Q ss_pred EEEEEcC--CcceEeEEEEEEec
Q psy16902 64 TVRVTNN--SGSAESTALLSVQG 84 (90)
Q Consensus 64 ~C~~~~~--~~~~~~~~~l~v~~ 84 (90)
.|.+.+. .........+.|.+
T Consensus 116 ~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 116 LCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp EEEEESSSSSCEECCCEEEEEES
T ss_pred EEEEecCCCceeeCCcEEEEEec
Confidence 9999973 22333334455543
No 342
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.95 E-value=8e-09 Score=56.81 Aligned_cols=68 Identities=12% Similarity=0.173 Sum_probs=50.6
Q ss_pred CCCceEEEEEEEccCCCCC----cEEEEeeCC--EEc------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPS----MRVDWFING--RPL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~----~~~~w~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+.+.|.|.+. +.+. +.+.|++++ ..+ ....++..........|.|.++...|.|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (438)
T 1qgc_4 14 SLGQRATISCRAS--ESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYY 91 (438)
T ss_dssp CTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred eCCCCEEEEEecC--CCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEE
Confidence 5699999999986 7765 489999863 211 1124555544455667999999999999999
Q ss_pred EEEEcCCc
Q psy16902 65 VRVTNNSG 72 (90)
Q Consensus 65 C~~~~~~~ 72 (90)
|.+.+..+
T Consensus 92 C~a~n~~~ 99 (438)
T 1qgc_4 92 CQQSNEVP 99 (438)
T ss_dssp EEECSSTT
T ss_pred EEEecCCC
Confidence 99999765
No 343
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.94 E-value=3.1e-08 Score=50.41 Aligned_cols=68 Identities=10% Similarity=0.174 Sum_probs=49.2
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+ .+.+.|++.. .. + ....++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (225)
T 1op3_H 13 KAGGSLILSCGVS--NFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVED 90 (225)
T ss_dssp ETTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEec--CcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhh
Confidence 4689999999987 665 6789999742 11 1 01245555432 235679999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 91 TAIYYCARKGSDR 103 (225)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998753
No 344
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=4.1e-08 Score=46.47 Aligned_cols=82 Identities=18% Similarity=0.215 Sum_probs=51.6
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCE----EcC--CC---CceEEEE-----eCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGR----PLP--AS---SRATTTF-----KFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~----~~~--~~---~~~~~~~-----~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. +. +.+.+.|++... .+. .. .++.... ......|.|.++...|.|.|.|.+
T Consensus 21 ~~G~~v~L~C~~~--~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 98 (136)
T 2d9c_A 21 AAGESATLRCAMT--SLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 98 (136)
T ss_dssp ETTSCEEECCEES--CCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEE
T ss_pred cCCCCEEEEEEEc--CCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 4689999999986 44 567899998751 111 00 1211100 011346999999999999999998
Q ss_pred EcCCc--ceE----eEEEEEEecCC
Q psy16902 68 TNNSG--SAE----STALLSVQGRR 86 (90)
Q Consensus 68 ~~~~~--~~~----~~~~l~v~~~~ 86 (90)
.+... ... ....|.|.+.+
T Consensus 99 ~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 99 FRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp EECCSSSCEEEEECCCEEEEEECCC
T ss_pred EeCCCCcccceeeCCCeEEEEEeCC
Confidence 87532 111 34567776544
No 345
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.94 E-value=1.8e-08 Score=52.00 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=47.5
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CEEc------CC-----------CCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GRPL------PA-----------SSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~~~------~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++ +..+ .. ..++..... .....|.|.++...|
T Consensus 147 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 224 (256)
T 3ux9_B 147 QPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 224 (256)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEEe--CCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhh
Confidence 4689999999997 665 788999986 2211 11 124444332 334569999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 225 sG~Y~C~~~~~ 235 (256)
T 3ux9_B 225 TAVYYCARYID 235 (256)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEcC
Confidence 99999999986
No 346
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.94 E-value=2e-09 Score=54.08 Aligned_cols=83 Identities=6% Similarity=0.064 Sum_probs=52.4
Q ss_pred CCCceEEEEEEEccCCCCC---cEEEEeeCCEEcCCCCceEE----EEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc--
Q psy16902 3 PQKRKIHFEARIEPVGDPS---MRVDWFINGRPLPASSRATT----TFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS-- 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~-- 73 (90)
..|+.+.|.|.+. +.++ +.+.|++++..+........ ........+.+......+.|.|.|.+.|..+.
T Consensus 104 ~~G~~~~L~C~~~--~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~ 181 (202)
T 1vca_A 104 EAGKPITVKCSVA--DVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMD 181 (202)
T ss_dssp ETTSCEEEEEEEE--EEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCT
T ss_pred cCCCCEEEEEEEC--CcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCC
Confidence 4689999999987 6433 47899999986532110000 00011223566777777889999999997664
Q ss_pred -----eEeEEEEEEecCCC
Q psy16902 74 -----AESTALLSVQGRRE 87 (90)
Q Consensus 74 -----~~~~~~l~v~~~~~ 87 (90)
......|.|..+|.
T Consensus 182 ~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 182 SVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TSCSEEEEEEECCEECCC-
T ss_pred CcceeEeeEEEEEEecCCC
Confidence 34455677776664
No 347
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.94 E-value=2.6e-09 Score=53.94 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=44.6
Q ss_pred CCC--ceEEEEEEEccCCCCCcEEEEeeC---CEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQK--RKIHFEARIEPVGDPSMRVDWFIN---GRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g--~~~~l~C~~~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.+| +.+.|.|.+. + |.+.+.|+++ +..+....+...... ..|.|.++...|.|.|.|.+.+..+
T Consensus 20 ~eG~~~~v~L~C~~~--~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~---~~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 20 TENKNKTVVIPCLGS--I-SNLNVSLCARYPEKRFVPDGNRISWDSK---KGFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp CCSTTCEEEECCCBS--S-TTCCEEEEEETTTEEECCCSSSCEEETT---TEEEEEGGGTTTCSEEEEEEC----
T ss_pred ecCCCccEEEeeccC--C-CCcEEEEEhhcCCCccccCCCcccccCC---ccEEEccCChhcCceEEEEEEECCe
Confidence 468 9999999875 4 7789999874 665554443333211 1488999999999999999987543
No 348
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.94 E-value=1.2e-08 Score=52.43 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=46.5
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CEEcC-----------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GRPLP-----------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++ +..+. ...++..... .....|.|.++...|
T Consensus 144 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 221 (250)
T 3esu_F 144 KPGASVKISCKDS--GYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVD 221 (250)
T ss_dssp CTTCCEEEEEECC--STTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCceEEEEEEec--CCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCccc
Confidence 4689999999986 656 789999987 32210 0134433322 334469999999999
Q ss_pred CeEEEEEEEc
Q psy16902 60 SGEYTVRVTN 69 (90)
Q Consensus 60 ~g~y~C~~~~ 69 (90)
.|.|.|.+.+
T Consensus 222 sG~Y~C~~~~ 231 (250)
T 3esu_F 222 SAVYFCARSG 231 (250)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999996
No 349
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.93 E-value=1.9e-08 Score=53.34 Aligned_cols=68 Identities=7% Similarity=-0.032 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCce-EEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRA-TTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.+|+++.|.|.+ ..+.+.+.|++++..+...... ..........|.+..+...|.|.|.|.+.|..+.
T Consensus 131 ~~G~~v~L~C~~---~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 131 KSGERVILQCWS---DIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp ETTCCEEEEEEE---SSCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred CCCCeEEEEEcC---CCCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 468999999987 4456788999998765432111 1110112346899999999999999999998663
No 350
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.93 E-value=7.6e-09 Score=54.11 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=43.9
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCC-eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFG-FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..+|+++.|.|.+. +. +.|++++..+.. +........ ...|.+..+...|.|.|.|.+.|..|.
T Consensus 12 v~~G~~v~L~C~~~--~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 12 LNVSSTFVLTCSGS--AP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp CCTTCCEEEEEEES--SC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred EeCCCcEEEEEecc--ce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 35699999999886 43 999999876521 111111111 356899999999999999999987765
No 351
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.93 E-value=1.4e-08 Score=53.27 Aligned_cols=68 Identities=19% Similarity=0.255 Sum_probs=48.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEcC-----------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPLP-----------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~~-----------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.+ .+.+.|+++. ..+. ...++..... .....|.|.++...|
T Consensus 39 ~~G~~v~L~C~~~--g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 39 RSGTSVKLSCTAS--GFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSED 116 (282)
T ss_dssp ETTCCEEEEEEEE--SSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eCCCeEEEEEecc--CCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhh
Confidence 4689999999987 664 5889999853 1100 1234444432 234679999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 117 sG~Y~C~~~n~~g 129 (282)
T 1qok_A 117 TAVYYCNEGTPTG 129 (282)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEeccCCC
Confidence 9999999998765
No 352
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.92 E-value=3.5e-09 Score=53.20 Aligned_cols=73 Identities=11% Similarity=0.176 Sum_probs=47.3
Q ss_pred CCCceEEEEEEEccCCCCCc---EEEEeeCCEEcC----------------CCCceEEE-------EeCCeEEEEEcCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM---RVDWFINGRPLP----------------ASSRATTT-------FKFGFISLDLLSIV 56 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~---~~~w~~~~~~~~----------------~~~~~~~~-------~~~~~~~~~~~~~~ 56 (90)
..|+++.|.|.+. +.+.+ .+.|++++.... ...+.... .......|.|.++.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 91 (225)
T 4fmk_A 14 RLGGTVELPCHLL--PPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR 91 (225)
T ss_dssp ETTSCEEECCEEC--SSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC
T ss_pred ecCCCEEEEEEEE--CCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC
Confidence 3599999999987 66655 478998753210 00111110 01122358999999
Q ss_pred CCCCeEEEEEEEcCCcceEeE
Q psy16902 57 LHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 57 ~~~~g~y~C~~~~~~~~~~~~ 77 (90)
..|.|.|.|.+.+..+.....
T Consensus 92 ~~D~G~Y~C~~~~~~~~~~~~ 112 (225)
T 4fmk_A 92 VEDEGNYTCEFATFPNGTRRG 112 (225)
T ss_dssp GGGCEEEEEEEEEETTEEEEE
T ss_pred HHHCcceEEEEEeCCCcceee
Confidence 999999999998866544443
No 353
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=5.1e-08 Score=50.12 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=47.5
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec---C-----------CCCceEEEEeC--CeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL---P-----------ASSRATTTFKF--GFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~~--~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +. +.+.+.|++.. . .+ . ...++...... ....|.|.++...|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 91 (242)
T 1hxm_B 14 TLSKTARLECVVS--GITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQD 91 (242)
T ss_dssp ETTCCEEEEEEEE--SSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEeC--CccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCccc
Confidence 4689999999987 54 56889999742 1 11 0 22455544332 35679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 92 ~G~Y~C~~~~~ 102 (242)
T 1hxm_B 92 IATYYCALWEA 102 (242)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEeeecC
Confidence 99999999875
No 354
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.91 E-value=3.5e-09 Score=53.22 Aligned_cols=73 Identities=15% Similarity=0.305 Sum_probs=50.0
Q ss_pred CCceEEEEEEEccCCC-CC-cEEEEeeCCEEcCCCCce--EEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 4 QKRKIHFEARIEPVGD-PS-MRVDWFINGRPLPASSRA--TTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~-~~-~~~~w~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.|+.+.|.|.+. +. |+ +.+.|++++..+...... ....... ...|.+......|.|.|.|.+.|..+....
T Consensus 128 ~g~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3mj8_L 128 KTNQATLVCMIN--GFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEK 205 (213)
T ss_dssp TTTEEEEEEEEE--EEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEE
T ss_pred cCCcEEEEEEee--ceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEe
Confidence 588999999987 64 33 489999999887643100 0001111 134788888888999999999998765554
Q ss_pred EE
Q psy16902 77 TA 78 (90)
Q Consensus 77 ~~ 78 (90)
..
T Consensus 206 ~~ 207 (213)
T 3mj8_L 206 SL 207 (213)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 355
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.91 E-value=1.3e-08 Score=50.99 Aligned_cols=63 Identities=8% Similarity=-0.057 Sum_probs=43.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeC-CeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKF-GFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|++++|.|.+. + +.+.+.|++++..+............ ....|.+.++. |.|.|.|.+.+.
T Consensus 120 ~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 120 LAGENVTLSCSSR--S-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp CTTCEEEEEEEES--S-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CCCCeEEEEEeCC--C-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 5799999999975 4 56889999998755432111111111 13457888887 999999998864
No 356
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.91 E-value=2.1e-08 Score=52.53 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=48.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c-----------C---CCCceEEEEe-CCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L-----------P---ASSRATTTFK-FGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~-----------~---~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 62 (90)
.+|+++.|.|.+. +.+.+.+.|+++. .. + . ...++..... .....|.|.++...|.|.
T Consensus 37 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 114 (279)
T 2wbj_D 37 KSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 114 (279)
T ss_dssp ETTSCEEEEEEES--SSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEE
T ss_pred cCCCeEEEEEEeC--CCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEE
Confidence 4689999999986 7788899999753 10 0 0 1234544432 345579999999999999
Q ss_pred EEEEEEcC
Q psy16902 63 YTVRVTNN 70 (90)
Q Consensus 63 y~C~~~~~ 70 (90)
|.|.+.+.
T Consensus 115 Y~C~~~~~ 122 (279)
T 2wbj_D 115 YICSARDL 122 (279)
T ss_dssp EEEEEEET
T ss_pred EEEEEccc
Confidence 99999983
No 357
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.91 E-value=1.4e-08 Score=51.85 Aligned_cols=67 Identities=9% Similarity=0.034 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---------------cCCCCceEEEE-eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---------------LPASSRATTTF-KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|. . +.+.+.+.|+++. .. .....++.... ......|.|.++...|.|.|.
T Consensus 13 ~~G~~v~L~C~-~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 89 (238)
T 2p1y_A 13 VTGGKVTLSCN-Q--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 89 (238)
T ss_dssp ETTCCEEEEEE-E--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEE
T ss_pred eCCCEEEEEee-c--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEE
Confidence 46899999999 5 8889999999851 10 01123444332 223346999999999999999
Q ss_pred EEEEcCCc
Q psy16902 65 VRVTNNSG 72 (90)
Q Consensus 65 C~~~~~~~ 72 (90)
|.+.+..+
T Consensus 90 C~~~~~~g 97 (238)
T 2p1y_A 90 CASGDLGQ 97 (238)
T ss_dssp EEEEC---
T ss_pred EEEEeCCC
Confidence 99998754
No 358
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.90 E-value=1.8e-08 Score=50.61 Aligned_cols=66 Identities=21% Similarity=0.242 Sum_probs=47.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEcC----------------CCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPLP----------------ASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
..|+++.|.|.+. +.+ .+.+.|+++. .... ...++..... .+...|.|.++...|.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 90 (210)
T 3d9a_H 13 KPSQTLSLTCSVT--GDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 90 (210)
T ss_dssp CTTSCEEEEEEEE--SSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred cCCCcEEEEEEEe--cccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccC
Confidence 5699999999987 654 4889998752 1100 1235544432 2345799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 91 G~Y~C~~~~~ 100 (210)
T 3d9a_H 91 ATYYCANWDG 100 (210)
T ss_dssp EEEEEEETTS
T ss_pred EEEEEEEecC
Confidence 9999999885
No 359
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.90 E-value=9.2e-08 Score=48.53 Aligned_cols=68 Identities=9% Similarity=0.132 Sum_probs=48.6
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. . .+ ....++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (220)
T 2fbj_H 13 QPGGSLKLSCAAS--GFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSED 90 (220)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEec--CccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhh
Confidence 5699999999987 655 5789998742 1 11 01245555432 234579999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 sG~Y~C~~~~~~~ 103 (220)
T 2fbj_H 91 TALYYCARLHYYG 103 (220)
T ss_dssp CEEEEEEEEETTT
T ss_pred CEEEEEEEecccc
Confidence 9999999988644
No 360
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.90 E-value=1.3e-08 Score=46.47 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=46.2
Q ss_pred CCCceEEEEEEEccCCCCCc-----EEEEeeCCEE-c---CC------------CCceEEEEeCCeEEEEEcCCCCCCCe
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-----RVDWFINGRP-L---PA------------SSRATTTFKFGFISLDLLSIVLHDSG 61 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-----~~~w~~~~~~-~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g 61 (90)
..|+++.|.|.+. +.|.+ .+.|++++.. + .. ..+..+. .....|.|.++...|.|
T Consensus 7 ~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~sL~I~~v~~~D~G 82 (110)
T 1ncn_A 7 YFNETADLPCQFA--NSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD--SDSWTLRLHNLQIKDKG 82 (110)
T ss_dssp ETTSCEEEECCCC--CTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEE--TTTTEEEECSCCGGGCE
T ss_pred EeCCCEEEEeEeC--CCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEE--CCCEEEEEcCCChHHCE
Confidence 4699999999875 44432 4899986531 0 00 1223222 12246999999999999
Q ss_pred EEEEEEEcCCcceEe
Q psy16902 62 EYTVRVTNNSGSAES 76 (90)
Q Consensus 62 ~y~C~~~~~~~~~~~ 76 (90)
.|.|.+.+..+....
T Consensus 83 ~Y~C~v~~~~~~~~~ 97 (110)
T 1ncn_A 83 LYQCIIHHKKPTGMI 97 (110)
T ss_dssp EEEEEEEEECSSSEE
T ss_pred EEEEEEEcCCCCceE
Confidence 999999886655433
No 361
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.90 E-value=5.2e-08 Score=53.86 Aligned_cols=76 Identities=17% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCCceEEEEEEEccCCC-C--CcEEEEeeCCEEcCCCCceEEEEeCCeEEE-EEcCCCCCCCe--EEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGD-P--SMRVDWFINGRPLPASSRATTTFKFGFISL-DLLSIVLHDSG--EYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g--~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|.+. +. | .+.+.|++++..+.. +... ....... ....+...|.| .|.|.+.|..+....
T Consensus 201 ~~G~~v~l~C~~~--g~~P~~~~~~~W~~~~~~~~~--~~~~--~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~ 274 (450)
T 1z7z_I 201 EVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNP--TVTY--GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 274 (450)
T ss_dssp ETTSEEEEEEEEE--SCTTGGGCEEEEEETTEECCC--EEEE--ETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEE
T ss_pred EeCCcEEEEEEee--CCCCCCceEEEEeCCCEeCCc--eEEe--cCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEE
Confidence 4689999999998 77 6 689999999987755 2222 1221111 12267888999 999999999888877
Q ss_pred EEEEEEec
Q psy16902 77 TALLSVQG 84 (90)
Q Consensus 77 ~~~l~v~~ 84 (90)
...+.|..
T Consensus 275 ~~~l~V~~ 282 (450)
T 1z7z_I 275 LQTVTIYS 282 (450)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 77777775
No 362
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.90 E-value=2.8e-09 Score=55.71 Aligned_cols=76 Identities=16% Similarity=0.150 Sum_probs=53.7
Q ss_pred CCCceEEEEEEEccCCCCC--cEEEEeeC-CEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe-EE
Q psy16902 3 PQKRKIHFEARIEPVGDPS--MRVDWFIN-GRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES-TA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~--~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~-~~ 78 (90)
.+|+.+.|.|.+. + |. +.+.|+++ +..+....++...... .+.+..+...|.|.|.|.+.+..+.... ..
T Consensus 102 ~~g~~v~l~C~~~--~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~ 175 (292)
T 4dkd_C 102 FEDQDALLPCLLT--D-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISI 175 (292)
T ss_dssp ETTSCEECCEEES--S-GGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCE
T ss_pred cCCCcEEEeeeCC--C-CCcceeEEEEecCCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEE
Confidence 4688999999986 5 44 77999987 4444444443332222 2889999999999999999987665543 55
Q ss_pred EEEEec
Q psy16902 79 LLSVQG 84 (90)
Q Consensus 79 ~l~v~~ 84 (90)
.+.|..
T Consensus 176 ~l~V~~ 181 (292)
T 4dkd_C 176 RLKVQK 181 (292)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 666664
No 363
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.90 E-value=2.3e-08 Score=51.68 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=47.1
Q ss_pred CCCceEEEEEEEccCC--CCCcEEEEeeCC--EE---c--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVG--DPSMRVDWFING--RP---L--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~--~~~~~~~w~~~~--~~---~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. + .+.+.+.|++.. .. + ....++....+ .....|.|.++...|
T Consensus 19 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 96 (256)
T 3juy_B 19 KPGASVKVSCQAS--GYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSAD 96 (256)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEee--cccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCccc
Confidence 5799999999987 5 367889999632 10 0 01235544422 335579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 97 sG~Y~C~~~~~ 107 (256)
T 3juy_B 97 TAVYYCARVGE 107 (256)
T ss_dssp CEEEEEEECCC
T ss_pred CEEEEEeEEec
Confidence 99999999886
No 364
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.89 E-value=8.8e-08 Score=43.49 Aligned_cols=77 Identities=18% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCceEEEEEEEccCC-CCCcEEEEeeCC----EEcCCCCceEEEEeCC--eEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 4 QKRKIHFEARIEPVG-DPSMRVDWFING----RPLPASSRATTTFKFG--FISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~~~~w~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.|+.+.|.|++. + .+.|.++|-+-+ ..+..... ......+ ...|.+..+...|.|.|.|.+....|...+
T Consensus 25 ~G~~f~leCpv~--yc~~rP~VtWcKln~~~c~~L~~~~q-~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ieS 101 (120)
T 2aw2_A 25 AGDPFELECPVK--YCANRPHVTWCKLNGTTCVKLEDRQT-SWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIES 101 (120)
T ss_dssp TTSCEEEEEEEE--CSSSCCEEEEEEECSSCEEECCSSCE-EEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred cCCeEEEEccEE--eccCCCceEEEecCCceEEECccccc-cceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcEEe
Confidence 488999999997 6 588999998654 44443221 1222222 335889999999999999999988776555
Q ss_pred EE-EEEEe
Q psy16902 77 TA-LLSVQ 83 (90)
Q Consensus 77 ~~-~l~v~ 83 (90)
-. .+.|.
T Consensus 102 HsvtI~Vt 109 (120)
T 2aw2_A 102 HSTTLYVT 109 (120)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEE
Confidence 44 34443
No 365
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.89 E-value=3.3e-09 Score=53.73 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEeeCCEEcCCCCceEEEEeCC----eEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFINGRPLPASSRATTTFKFG----FISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|.+. +. |.| .+.|++++..+... ........+ ...|.+......| |.|.|.+.|..+....
T Consensus 140 ~~g~~v~L~C~~~--g~~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 140 QTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp CCSSEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cCCCcEEEEEEEc--cEECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 3688999999987 75 778 99999998754321 111110111 1247788888888 9999999998876544
Q ss_pred EE
Q psy16902 77 TA 78 (90)
Q Consensus 77 ~~ 78 (90)
..
T Consensus 216 ~~ 217 (222)
T 1q9r_B 216 DK 217 (222)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 366
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.89 E-value=3.7e-09 Score=55.37 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=53.1
Q ss_pred CCCceEEEEEEEccCCCCC-cEEEEe-eCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCe-EEEEEEEcCCcceEe-EE
Q psy16902 3 PQKRKIHFEARIEPVGDPS-MRVDWF-INGRPLPASSRATTTFKFGFISLDLLSIVLHDSG-EYTVRVTNNSGSAES-TA 78 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~-~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~y~C~~~~~~~~~~~-~~ 78 (90)
.+|+.+.|.|.+. + |. +.+.|+ +++..+....++...... .+.+..+...|.| .|.|.+.|..+.... ..
T Consensus 104 ~~g~~v~l~C~~~--~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~ 177 (290)
T 2o26_X 104 KEDSDALVRCPLT--D-PQVSQYSLIECDGKSLPTDLTFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKF 177 (290)
T ss_dssp ETTSCEEECCCBS--C-CSCEEEEEEETTSCCCCTTCEEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCCE
T ss_pred ecCCeEEEeCcCC--C-CCCceEEEEeCCCcCCCCCCceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEEE
Confidence 3588999999875 5 77 899995 677766554444333222 5889999999999 999999998544332 34
Q ss_pred EEEEe
Q psy16902 79 LLSVQ 83 (90)
Q Consensus 79 ~l~v~ 83 (90)
.+.|.
T Consensus 178 ~l~V~ 182 (290)
T 2o26_X 178 TLKVR 182 (290)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 367
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.89 E-value=2.6e-08 Score=50.02 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=52.7
Q ss_pred CCCceEEEEEEEccCCC-------CCcEEEEeeCCEE------c-----------CCCCceEEEEe--CCeEEEEEcCCC
Q psy16902 3 PQKRKIHFEARIEPVGD-------PSMRVDWFINGRP------L-----------PASSRATTTFK--FGFISLDLLSIV 56 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-------~~~~~~w~~~~~~------~-----------~~~~~~~~~~~--~~~~~~~~~~~~ 56 (90)
.+|+.+.|.|.+. +. +.+.+.|++++.. + ....++.+..+ .+...|.|.++.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 13 QEGLCVLVPCSFS--YPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp ETTCCEEECCEEE--CCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred ecCccEEEeeeee--cCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 4689999999886 43 5788999987642 1 01134433221 123359999999
Q ss_pred CCCCeEEEEEEEcCCcceE----eEEEEEEec
Q psy16902 57 LHDSGEYTVRVTNNSGSAE----STALLSVQG 84 (90)
Q Consensus 57 ~~~~g~y~C~~~~~~~~~~----~~~~l~v~~ 84 (90)
..|.|.|.|.+.+..+... ....|.|.+
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 122 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA 122 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEEC
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEec
Confidence 9999999999988653221 245566654
No 368
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.88 E-value=7.6e-09 Score=53.95 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=49.5
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCc-----ceE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSG-----SAE 75 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~-----~~~ 75 (90)
..+|++++|.|.+. +. .+.+.|++++..+......... .......+.+.++. |.|.|.|.+.+... ...
T Consensus 118 V~~G~~vtL~C~~~--~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S 192 (257)
T 1b6u_A 118 VLAGESVTLSCSSR--SS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSS 192 (257)
T ss_dssp CBTTCEEEEEEECS--SC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCC
T ss_pred cCCCCEEEEEEeCC--CC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCC
Confidence 35799999999875 44 4789999998654322110000 01123457888887 99999999986522 122
Q ss_pred eEEEEEEecCC
Q psy16902 76 STALLSVQGRR 86 (90)
Q Consensus 76 ~~~~l~v~~~~ 86 (90)
....|.|.+.|
T Consensus 193 ~pl~L~V~g~p 203 (257)
T 1b6u_A 193 DPLLVSVTGNP 203 (257)
T ss_dssp CCEEECCBCCC
T ss_pred CCEEEEEeccC
Confidence 23455555554
No 369
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.88 E-value=4.1e-09 Score=52.29 Aligned_cols=77 Identities=8% Similarity=0.096 Sum_probs=50.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce--EeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA--ESTALL 80 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~--~~~~~l 80 (90)
.+|++++|.|.+. + +.+.+.|++++..+...... .........|.|.++...|.|.|.|.+.+..+.. .....|
T Consensus 16 ~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l 91 (188)
T 1oll_A 16 PKEKQVTICCQGN--Y-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 91 (188)
T ss_dssp ETTCCEEEEEECC--T-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred CCCCCEEEEEecC--C-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEE
Confidence 4699999999874 4 45789999998764311000 0011233468999999999999999998754322 233445
Q ss_pred EEe
Q psy16902 81 SVQ 83 (90)
Q Consensus 81 ~v~ 83 (90)
.|.
T Consensus 92 ~V~ 94 (188)
T 1oll_A 92 VVT 94 (188)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 370
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.88 E-value=7e-09 Score=52.12 Aligned_cols=68 Identities=21% Similarity=0.282 Sum_probs=46.3
Q ss_pred CCceEEEEEEEccCCCCC-c-EEEEeeCCEEcCCCCce---EEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVGDPS-M-RVDWFINGRPLPASSRA---TTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~-~-~~~w~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.|+.+.|.|.+. +.++ + .+.|++++..+...... ....+.. ...+.+......|.|.|.|.+.+....
T Consensus 129 ~g~~v~L~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 129 STAKATLVCTIT--DFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp TTTEEEEEEEEE--EEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred cCCcEEEEEEEE--EEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 478999999987 6443 3 89999999887653211 0000111 234777777788999999999997544
No 371
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.88 E-value=5e-09 Score=55.70 Aligned_cols=83 Identities=19% Similarity=0.234 Sum_probs=55.0
Q ss_pred CCCceEEEEEEEccCCC----CCcEEEEeeCC--E-------------Ec--CCCCceEEE-EeCCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD----PSMRVDWFING--R-------------PL--PASSRATTT-FKFGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~----~~~~~~w~~~~--~-------------~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 60 (90)
.+|+.+.|.|.+. +. +.+.+.|++++ . .+ ....++.+. .......|.|.++...|.
T Consensus 27 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 104 (331)
T 3u83_A 27 FIGTDVVLHCSFA--NPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDE 104 (331)
T ss_dssp ETTCCEEECCBCS--SCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGC
T ss_pred EecCCEEEeeecC--CCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccC
Confidence 4689999999876 54 45579999853 1 11 112333332 111233599999999999
Q ss_pred eEEEEE-EEcCCcceEeEEEEEEecCCC
Q psy16902 61 GEYTVR-VTNNSGSAESTALLSVQGRRE 87 (90)
Q Consensus 61 g~y~C~-~~~~~~~~~~~~~l~v~~~~~ 87 (90)
|.|.|. ..+..+.......|.|..+|.
T Consensus 105 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 132 (331)
T 3u83_A 105 GVYICEFATFPTGNRESQLNLTVMAKPT 132 (331)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred cEEEEEEEecCCCccEEEEEEEEecCCc
Confidence 999998 555567666777777776554
No 372
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.88 E-value=4.8e-08 Score=49.45 Aligned_cols=68 Identities=13% Similarity=0.219 Sum_probs=48.2
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c----------------CCCCceEEEEe--CCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L----------------PASSRATTTFK--FGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~----------------~~~~~~~~~~~--~~~~~~~~~~~~~ 57 (90)
..|+++.|.|.+. +.+ .+.+.|+++. .. + ....++....+ .+...|.|.++..
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 13 QSGGSLRLSCATS--GFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRA 90 (222)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred cCCCEEEEEEEec--CccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCc
Confidence 4699999999987 654 6789999742 11 1 01234544432 2355799999999
Q ss_pred CCCeEEEEEEEcCCc
Q psy16902 58 HDSGEYTVRVTNNSG 72 (90)
Q Consensus 58 ~~~g~y~C~~~~~~~ 72 (90)
.|.|.|.|.+.+..+
T Consensus 91 ~D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 91 EDSATYYCARDHDGY 105 (222)
T ss_dssp GGCEEEEEEECCCSS
T ss_pred ccCeEEEEEEeccCC
Confidence 999999999988643
No 373
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.88 E-value=1e-07 Score=44.59 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=47.6
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec-C--------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL-P--------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|.+. +.+ ...+.|++.. . .+ . ...++..........|.|.++...|.|.|.|.
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~Y~C~ 90 (123)
T 3t0v_A 13 TPGQKVTIFCSGS--SSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCL 90 (123)
T ss_dssp CTTCCEEEEEECC--TTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred cCCCCEEEEEecC--CCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCHHHCEEEEEE
Confidence 5799999999886 433 4679998742 1 11 1 12455554445567899999999999999999
Q ss_pred EEcCC
Q psy16902 67 VTNNS 71 (90)
Q Consensus 67 ~~~~~ 71 (90)
+.+..
T Consensus 91 ~~~~~ 95 (123)
T 3t0v_A 91 SWDDS 95 (123)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 88753
No 374
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.88 E-value=1.6e-09 Score=54.43 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCCCceEEE--E--eC---CeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 4 QKRKIHFEARIEPVG-DPSM-RVDWFINGRPLPASSRATTT--F--KF---GFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.|+.+.|.|.+. + .|.+ .+.|++++..+......... . +. ....|.+..+...|.|.|.|.+.|.....
T Consensus 126 ~g~~~~l~C~~~--g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 126 TSGGASVVCFLN--NFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp HTTEEEEEEEEE--EEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCcEEEEEEEe--eecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 377899999987 6 4554 89999999877654111000 0 00 02368888888889999999999976543
No 375
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.88 E-value=6.7e-10 Score=54.77 Aligned_cols=68 Identities=16% Similarity=0.277 Sum_probs=48.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEE--cCC------------CCceEEEE---eCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRP--LPA------------SSRATTTF---KFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~--~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~g~y~C 65 (90)
..|+++.|.|.+. +.|.+.+.|++++.. +.. ..+..... ..+...|.+.++...|.|.|.|
T Consensus 8 ~~G~~v~L~C~~~--~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 85 (184)
T 2ny1_B 8 KKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYIC 85 (184)
T ss_dssp ETTSCEEECCBCS--SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEE
T ss_pred eCCCCEEEEEEEc--CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEE
Confidence 4699999999886 888899999998742 110 11222111 1123358999999999999999
Q ss_pred EEEcCCc
Q psy16902 66 RVTNNSG 72 (90)
Q Consensus 66 ~~~~~~~ 72 (90)
.+.+..+
T Consensus 86 ~~~~~~~ 92 (184)
T 2ny1_B 86 EVEDQKE 92 (184)
T ss_dssp EETTEEE
T ss_pred EEEcCCC
Confidence 9888654
No 376
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.88 E-value=3.2e-09 Score=53.34 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=46.6
Q ss_pred CCceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCC-Cce-EEEE--eCC---eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVG-DPSM-RVDWFINGRPLPAS-SRA-TTTF--KFG---FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~-~~~-~~~~--~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.|+.+.|.|.+. + .|.+ .+.|++++..+... ... .... +.. .+.|.+......|.|.|.|.+.|....
T Consensus 125 ~g~~v~l~C~~~--g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 125 ATGGASVVCLMN--NFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTEEEEEEEEE--EEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEE--eEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 478999999986 6 3443 89999999877543 110 0000 111 135788888888999999999997553
No 377
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.87 E-value=1.1e-08 Score=54.73 Aligned_cols=77 Identities=21% Similarity=0.192 Sum_probs=53.9
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALLS 81 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l~ 81 (90)
..|++++|.|.+. +.+ .+.+.|++++..+..... ...... ..|.|.++...|.|.|.|. ..|.......|.
T Consensus 19 ~~G~~v~l~C~~~--~~~~~~~i~W~~~~~~~~~~~~-~~~~~~--~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L~ 90 (325)
T 1n26_A 19 LPGDSVTLTCPGV--EPEDNATVHWVLRKPAAGSHPS-RWAGMG--RRLLLRSVQLHDSGNYSCY---RAGRPAGTVHLL 90 (325)
T ss_dssp CTTCCEEEECTTS--CTTCCSEEEEEEECSSSSCCCE-EEEEES--SEEEECSCCGGGCEEEEEE---SSSSCSCEEEEE
T ss_pred CCCCcEEEEeCCC--CCCCCceEEEEECCccCCcccc-cccccc--ceEEecccchhhCeEeEEE---eCCEEeeeEEEE
Confidence 4799999999765 544 689999998765422211 111122 2589999999999999999 256666677788
Q ss_pred EecCCC
Q psy16902 82 VQGRRE 87 (90)
Q Consensus 82 v~~~~~ 87 (90)
|..+|.
T Consensus 91 V~~pP~ 96 (325)
T 1n26_A 91 VDVPPE 96 (325)
T ss_dssp ECCCCC
T ss_pred eccCCC
Confidence 776553
No 378
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.87 E-value=1.1e-07 Score=49.13 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=47.0
Q ss_pred CCCceEEEEEEEccCC--CCCcEEEEeeCC----E-Ec-------------CCCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVG--DPSMRVDWFING----R-PL-------------PASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~--~~~~~~~w~~~~----~-~~-------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. + .+.+.+.|++.. . .+ ....++..... .....|.|.++...|.
T Consensus 21 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 98 (257)
T 3gkz_A 21 KPSQTLSLTCSVT--GDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDT 98 (257)
T ss_dssp CTTCCEEEEEEEE--ESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred cCCCcEEEEEEEE--cccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhC
Confidence 4699999999987 5 357889999732 1 11 11234444322 2345699999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 99 G~Y~C~~~n~ 108 (257)
T 3gkz_A 99 ATYYCSYFDS 108 (257)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEEEecC
Confidence 9999999986
No 379
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.87 E-value=9.9e-08 Score=49.75 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=48.6
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E--E-c---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R--P-L---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~--~-~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. . . + . ...++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (257)
T 3bn9_D 13 KPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAED 90 (257)
T ss_dssp CTTCEEEEEEEEE--SSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGG
T ss_pred cCCCcEEEEEEec--cccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhh
Confidence 5699999999987 654 5789998753 1 1 1 0 1235544432 345679999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 sG~Y~C~~~~~~g 103 (257)
T 3bn9_D 91 TAVYYCARPYLTY 103 (257)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998654
No 380
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.37 E-value=2.5e-10 Score=52.40 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=46.3
Q ss_pred CCCCceEEEEEEEccCCCCCcEEEEeeCCE--Ec------------CCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEE
Q psy16902 2 DPQKRKIHFEARIEPVGDPSMRVDWFINGR--PL------------PASSRATTTF--KFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~--~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C 65 (90)
..+|++++|.|.+. +.+.+.+.|++... .+ ....++.... ......|.|.++...|.|.|.|
T Consensus 11 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (110)
T 1u3h_A 11 VWEGETAILNCSYE--NSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFC 88 (110)
Confidence 35699999999986 66778899998632 11 0122333322 2223468999999999999999
Q ss_pred EEEcC
Q psy16902 66 RVTNN 70 (90)
Q Consensus 66 ~~~~~ 70 (90)
.+.+.
T Consensus 89 ~~~~~ 93 (110)
T 1u3h_A 89 AASAN 93 (110)
Confidence 98864
No 381
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.86 E-value=5.4e-08 Score=49.82 Aligned_cols=63 Identities=13% Similarity=0.082 Sum_probs=44.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--------------EEc---CCCCceEEEE-eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--------------RPL---PASSRATTTF-KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--------------~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. + +.+.+.|++.. ... ....++.... ......|.|.++...|.|.|.
T Consensus 15 ~~G~~v~L~C~~~--~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 91 (240)
T 3q5y_A 15 EKGGRSVLTCIPI--S-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYF 91 (240)
T ss_dssp ETTCCEEEEEECC--T-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEE
T ss_pred cCCCcEEEEEEeC--C-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEE
Confidence 4699999999874 4 77899999821 111 1123444433 233557999999999999999
Q ss_pred EEEE
Q psy16902 65 VRVT 68 (90)
Q Consensus 65 C~~~ 68 (90)
|.+.
T Consensus 92 C~~~ 95 (240)
T 3q5y_A 92 CASS 95 (240)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9997
No 382
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.86 E-value=2.1e-08 Score=50.06 Aligned_cols=73 Identities=21% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCCceEEEEEEEccCCCCCc---EEEEeeCCEEcCCC------------------CceEEEE---eCCeEEEEEcCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM---RVDWFINGRPLPAS------------------SRATTTF---KFGFISLDLLSIVLH 58 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~---~~~w~~~~~~~~~~------------------~~~~~~~---~~~~~~~~~~~~~~~ 58 (90)
..|+++.|.|.+. +.|.+ .+.|++++...... .++.... ......|.|.++...
T Consensus 12 ~~G~~v~L~C~v~--~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 89 (218)
T 4frw_A 12 VLGQDAKLPCFYR--GDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 89 (218)
T ss_dssp ETTSCEEECCEEC--CCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGG
T ss_pred EcCCCEEEEEEEE--cCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHH
Confidence 4699999999997 76655 48999876432210 0111110 111235899999999
Q ss_pred CCeEEEEEEEcCCcceEeE
Q psy16902 59 DSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 59 ~~g~y~C~~~~~~~~~~~~ 77 (90)
|.|.|.|.+.+..+.....
T Consensus 90 D~G~Y~C~~~~~~~~~~~~ 108 (218)
T 4frw_A 90 DEGEYECRVSTFPAGSFQA 108 (218)
T ss_dssp GCEEEEEEEEEETTEEEEE
T ss_pred HCCceeEEEEeccCceeee
Confidence 9999999988765543333
No 383
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.86 E-value=1.3e-09 Score=55.23 Aligned_cols=69 Identities=12% Similarity=0.130 Sum_probs=47.9
Q ss_pred CCCceEEEEEEEccCCC---C-CcEEEEeeCCEEcCCCCceEEEE-eC----CeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGD---P-SMRVDWFINGRPLPASSRATTTF-KF----GFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~---~-~~~~~w~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+++.|.|.+. +. | .+.+.|++++..+.......... .. ....|.|..+...|.|.|.|.+.+..+.
T Consensus 24 ~~G~~v~L~C~~~--g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 24 MISLTPKVTCVVV--DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLP 101 (218)
T ss_dssp CTTSCCEEEEEEE--EECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCS
T ss_pred ccCCCeeEEEEEc--CCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCC
Confidence 4699999999987 65 3 37899999997765321110000 00 1235788888888999999999987654
No 384
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.86 E-value=3.7e-08 Score=54.21 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=48.3
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CEEcC-----------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GRPLP-----------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+.+.|.|.+. +.| .+.+.|+++ +..+. ...++..... .....|.|.++...|
T Consensus 231 ~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 308 (438)
T 1qgc_4 231 KPGGSLKLSCTAS--GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSAD 308 (438)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred ecCCcEEEEEEEc--ccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhh
Confidence 4689999999998 777 678999986 32211 1234444332 234579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.|.
T Consensus 309 ~G~Y~C~a~n~ 319 (438)
T 1qgc_4 309 TAMYYCVRRED 319 (438)
T ss_dssp CCEEEEEECCS
T ss_pred CEEEEEEEEcc
Confidence 99999999984
No 385
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.86 E-value=5.4e-08 Score=51.52 Aligned_cols=63 Identities=11% Similarity=0.052 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCC-------CCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVG-------DPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
..|+++.|.|.+. + .|.|.+.|.+++..+... ++... +.....|.+.++... .|.|.|.+.+.
T Consensus 17 ~~G~~v~l~C~~~--~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~~~ 86 (303)
T 1i1r_A 17 QLHSNFTAVCVLK--EKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNILTF 86 (303)
T ss_dssp ETTCCEEEEEEEC--HHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEEET
T ss_pred eCCCCEEEEEEEC--CccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecccC
Confidence 4689999999986 4 477999999999887543 33332 333457899999887 49999999874
No 386
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.86 E-value=7.9e-08 Score=44.31 Aligned_cols=67 Identities=10% Similarity=0.182 Sum_probs=47.3
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCC--E---Ec---CC----------CCceEEEEeCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFING--R---PL---PA----------SSRATTTFKFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~--~---~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|++++|.|.+. +. +...+.|++.. . .+ .. ..++......+...|.|.++..+|.|.|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~Dsg~Y 91 (115)
T 2otu_A 14 SLGASAKLTCTLS--SQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIY 91 (115)
T ss_dssp CTTCCEEEEEEEC--GGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCCCEEEEEEec--CCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCChhHCEEE
Confidence 5799999999986 43 56789998731 1 11 11 2355444444556799999999999999
Q ss_pred EEEEEcCC
Q psy16902 64 TVRVTNNS 71 (90)
Q Consensus 64 ~C~~~~~~ 71 (90)
.|.+.+..
T Consensus 92 ~C~~~~~~ 99 (115)
T 2otu_A 92 ICGVGDTI 99 (115)
T ss_dssp EEEEEECC
T ss_pred EEEEecCC
Confidence 99987653
No 387
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.85 E-value=9.3e-09 Score=53.25 Aligned_cols=80 Identities=15% Similarity=0.192 Sum_probs=46.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c---C---------C--CCceEEE--EeCCeEEEEEcCCCCCCCe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L---P---------A--SSRATTT--FKFGFISLDLLSIVLHDSG 61 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~---~---------~--~~~~~~~--~~~~~~~~~~~~~~~~~~g 61 (90)
.+|++++|.|.+. +.+.+.+.|++.. .. + . . ..+.... .......|.|.++...|.|
T Consensus 15 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 92 (259)
T 3omz_A 15 QTGSSAEITCDLA--EGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSG 92 (259)
T ss_dssp ETTCCEEEECCC-------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCE
T ss_pred cCCCcEEEEEEEc--cCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCE
Confidence 4699999999887 7788899999831 10 0 0 0 0011111 1112335999999999999
Q ss_pred EEEEEEEcCCc---ceEeEEEEEEec
Q psy16902 62 EYTVRVTNNSG---SAESTALLSVQG 84 (90)
Q Consensus 62 ~y~C~~~~~~~---~~~~~~~l~v~~ 84 (90)
.|.|.+.+..+ .......|.|..
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 93 VYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp EEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred EEEEEEeeCCccccEECCCCEEEEec
Confidence 99999998754 222333455543
No 388
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.85 E-value=6.6e-08 Score=49.92 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=51.8
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CEE---c--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GRP---L--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~~---~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++. +.. + ....++..... .+...|.|.++...|
T Consensus 14 ~~G~~v~L~C~~~--g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 91 (253)
T 3uzq_A 14 KPGASVRLSCTAS--GFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGD 91 (253)
T ss_dssp CTTCCEEEEEEEC--SSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEee--CCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCccc
Confidence 4699999999986 643 678999882 110 0 01134444432 234569999999999
Q ss_pred CeEEEEEEEcCCcceE-eEEEEEEe
Q psy16902 60 SGEYTVRVTNNSGSAE-STALLSVQ 83 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~-~~~~l~v~ 83 (90)
.|.|.|.+.+..+... ....+.|.
T Consensus 92 sG~Y~C~~~~~~~~~~~~~~~l~V~ 116 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWGQGTLVTVS 116 (253)
T ss_dssp CEEEEEEECSSSCCEECCCEEEEEC
T ss_pred CEEEEEEEeeCCccEECCCcEEEEe
Confidence 9999999998544332 33445554
No 389
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.84 E-value=3.3e-07 Score=42.88 Aligned_cols=82 Identities=6% Similarity=0.084 Sum_probs=54.0
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeCCE------EcCC--------CCceEEEEe--CCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFINGR------PLPA--------SSRATTTFK--FGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~------~~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|++++|.|.+. ... ...+.|++... .+.. ..++.+..+ .+...|.|.+++.+|.|.|.|
T Consensus 15 ~~G~svtL~C~~s--~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C 92 (124)
T 2nms_A 15 LERGSLTVQCVYR--SGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWC 92 (124)
T ss_dssp ETTCCEEEEEEEC--TTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred eCCCCEEEEeEEe--CCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEE
Confidence 4799999999986 332 34689987532 1111 134444322 345679999999999999999
Q ss_pred EEEcCCcceEeEEEEEEecCC
Q psy16902 66 RVTNNSGSAESTALLSVQGRR 86 (90)
Q Consensus 66 ~~~~~~~~~~~~~~l~v~~~~ 86 (90)
.+............|.|...|
T Consensus 93 ~~~~~~~~~~~~v~L~V~~~~ 113 (124)
T 2nms_A 93 GIEKTGNDLGVTVQVTIDPAP 113 (124)
T ss_dssp EEEETTEEEEEEEEEEEECCC
T ss_pred EEEcCCCCccEEEEEEEeCCC
Confidence 988765444445667766543
No 390
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.84 E-value=3.7e-09 Score=52.72 Aligned_cols=82 Identities=17% Similarity=0.176 Sum_probs=54.1
Q ss_pred CCCceEEEEEEEccC--CCCCcEEEEeeCCEEcCC------------CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPV--GDPSMRVDWFINGRPLPA------------SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~--~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
..|+++.|.|.+... +.+.+.+.|++++..+.. ..+..+. ..+...|.|.++...|.|.|.|.+.
T Consensus 7 ~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~ 85 (201)
T 1dr9_A 7 EVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYECVVL 85 (201)
T ss_dssp ETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEEEEEE
T ss_pred EeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEEEEEE
Confidence 468999999977410 235678999999876520 0122221 1122369999999999999999999
Q ss_pred cCCcce-----EeEEEEEEecC
Q psy16902 69 NNSGSA-----ESTALLSVQGR 85 (90)
Q Consensus 69 ~~~~~~-----~~~~~l~v~~~ 85 (90)
+..+.. .....|.|...
T Consensus 86 ~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 86 KYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp ECCTTSCEEEEEEEEEEEEECC
T ss_pred cCCCCccccccccEEEEEEcCC
Confidence 976543 23456666554
No 391
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.84 E-value=9.2e-09 Score=51.85 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=46.6
Q ss_pred CCceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCCCceEE--EE--eCC---eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVG-DPSM-RVDWFINGRPLPASSRATT--TF--KFG---FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~~~~~~--~~--~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.|+.+.|.|.+. + .|.+ .+.|++++..+........ .. +.. .+.|.+......|.|.|.|.+.|....
T Consensus 128 ~g~~v~L~C~~~--g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 128 KSGTASVVCLLN--NFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp HTTEEEEEEEEE--EEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cCCcEEEEEEEE--eEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 377899999987 6 4554 8999999987754311110 00 011 125778888888999999999997644
No 392
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.84 E-value=7.9e-08 Score=45.68 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCCCC---CcEEEEeeCCE-----EcC---------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP---SMRVDWFINGR-----PLP---------ASSRATTTFKFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~~~~w~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C 65 (90)
.+|++++|.|.+. ..+ .+.+.|++... .+. ...|+..........|.|.+++..|.|.|.|
T Consensus 18 ~~G~~vtL~C~~~--~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y~C 95 (135)
T 1p4b_L 18 SPGETVTLTCRSS--TGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFC 95 (135)
T ss_dssp CTTCEEEEEEEET--TSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred cCCCCEEEEEEec--CCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEEEE
Confidence 5789999999986 443 56799987421 110 1245555444455679999999999999999
Q ss_pred EEEcCC
Q psy16902 66 RVTNNS 71 (90)
Q Consensus 66 ~~~~~~ 71 (90)
.+.+..
T Consensus 96 ~~~~~~ 101 (135)
T 1p4b_L 96 ALWYSN 101 (135)
T ss_dssp EEECSS
T ss_pred EEecCC
Confidence 988753
No 393
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.84 E-value=2.1e-09 Score=59.36 Aligned_cols=70 Identities=11% Similarity=0.177 Sum_probs=50.0
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCCEEcCCCCce--EEEEeC---CeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFINGRPLPASSRA--TTTFKF---GFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+.+.|.|.+. +.+ .+.+.|++++..+...... ....+. ....|.|..+...|.|.|.|.+.|..+.
T Consensus 253 ~~G~~~~L~C~~~--g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 330 (444)
T 1igt_B 253 MISLSPIVTCVVV--DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLP 330 (444)
T ss_dssp CTTSCCEEEEEEE--EECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCS
T ss_pred ecCCCcEEEEEEe--ecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCC
Confidence 4689999999997 663 4689999999876543211 111111 1235888888889999999999998775
Q ss_pred e
Q psy16902 74 A 74 (90)
Q Consensus 74 ~ 74 (90)
.
T Consensus 331 ~ 331 (444)
T 1igt_B 331 A 331 (444)
T ss_dssp S
T ss_pred C
Confidence 5
No 394
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.84 E-value=1e-09 Score=55.93 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=37.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE--Ec------------CCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR--PL------------PASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|+++.|.|.+. +.+.+.+.|+++.. .+ ....++..........|.|.++...|.|.|.|.+.
T Consensus 36 ~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 113 (233)
T 3bqu_C 36 SIGEKVTIRCITS--TDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQS 113 (233)
T ss_dssp -----CCEEEEEE--EEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEEC
T ss_pred ecCCCEEEEEecC--CcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEEe
Confidence 4689999999987 77778899987531 11 00122222212223368999999999999999998
Q ss_pred cCCc
Q psy16902 69 NNSG 72 (90)
Q Consensus 69 ~~~~ 72 (90)
+..+
T Consensus 114 ~~~~ 117 (233)
T 3bqu_C 114 DNLP 117 (233)
T ss_dssp SSSS
T ss_pred cCCc
Confidence 7654
No 395
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.83 E-value=5.5e-08 Score=49.55 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=48.3
Q ss_pred CCCceEEEEEEEccCCCCC----cEEEEeeCC--EEc------C----------CCCceEEEEe--CCeEEEEEcCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPS----MRVDWFING--RPL------P----------ASSRATTTFK--FGFISLDLLSIVLH 58 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~----~~~~w~~~~--~~~------~----------~~~~~~~~~~--~~~~~~~~~~~~~~ 58 (90)
.+|+++.|.|.+. +.+. +.+.|++.. ..+ . ...++..... .+...|.|.+++..
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (228)
T 3bae_H 13 KPSQTLSLTCSFS--GFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTA 90 (228)
T ss_dssp CTTCCEEEEEEEE--SSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGG
T ss_pred cCCCeEEEEEEEe--CcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcc
Confidence 5699999999987 6664 889998742 110 0 1234544432 23467999999999
Q ss_pred CCeEEEEEEEcCCc
Q psy16902 59 DSGEYTVRVTNNSG 72 (90)
Q Consensus 59 ~~g~y~C~~~~~~~ 72 (90)
|.|.|.|.+.+..+
T Consensus 91 D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 91 DTATYYCARRGFYG 104 (228)
T ss_dssp GCEEEEEEEEEEST
T ss_pred cCEEEEEEEecCCC
Confidence 99999999988643
No 396
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.83 E-value=1.5e-07 Score=47.86 Aligned_cols=67 Identities=12% Similarity=0.150 Sum_probs=48.0
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec----C----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL----P----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~----~----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. . .+ . ...|+....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (223)
T 1dee_B 13 QPGKSLRLSCAAS--GFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 90 (223)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEec--CcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHHH
Confidence 5699999999987 554 4789999742 1 11 0 1235555433 235679999999999
Q ss_pred CeEEEEEEEcCC
Q psy16902 60 SGEYTVRVTNNS 71 (90)
Q Consensus 60 ~g~y~C~~~~~~ 71 (90)
.|.|.|.+.+..
T Consensus 91 ~G~Y~C~~~~~~ 102 (223)
T 1dee_B 91 TAVYYCAKVKFY 102 (223)
T ss_dssp CEEEEEEEESSS
T ss_pred CEEEEEEEeccc
Confidence 999999999864
No 397
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.82 E-value=4e-08 Score=48.63 Aligned_cols=79 Identities=11% Similarity=0.165 Sum_probs=52.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC-CEEc---C---------CC--CceEEEEeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN-GRPL---P---------AS--SRATTTFKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~-~~~~---~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. ...+.+.+.|++. ...+ . .. .|+.+. .....|.|.+++..|.|.|.|.+
T Consensus 12 ~~G~~vtL~c~~~-~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~--~~~~sL~I~~v~~~D~G~Y~C~v 88 (180)
T 2dru_A 12 ITGSNVTLTILKH-PLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD--KTNGALRIYNVSKEDRGDYYMRM 88 (180)
T ss_dssp ETTSCEEECCCSS-CCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC--TTTCCEEECSCCGGGCEEEEEEE
T ss_pred EeCCCEEEeCCCC-CCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe--CCCccEEEcCCCHHHCeEEEEEE
Confidence 4699999999764 1234689999984 2211 0 11 233331 22235999999999999999999
Q ss_pred EcCCcceEeEEEEEEecC
Q psy16902 68 TNNSGSAESTALLSVQGR 85 (90)
Q Consensus 68 ~~~~~~~~~~~~l~v~~~ 85 (90)
.+.. .......|.|.++
T Consensus 89 ~~~~-~~~~~~~L~V~~~ 105 (180)
T 2dru_A 89 LHET-EDQWKITMEVYEM 105 (180)
T ss_dssp ESSS-EEEEEEEEEEECC
T ss_pred EcCC-eEEEEEEEEEECC
Confidence 8765 4555567777654
No 398
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.82 E-value=2.5e-08 Score=46.04 Aligned_cols=66 Identities=11% Similarity=0.073 Sum_probs=46.5
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCC--E---EcC------------CCCceEEEE--eCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFING--R---PLP------------ASSRATTTF--KFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~--~---~~~------------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|++++|.|.+. .. +...+.|++.. . .+. ...++.... ......|.|.++...|.|.
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~ 90 (116)
T 1tvd_A 13 ASGSEVVLLCTYD--TVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSAT 90 (116)
T ss_dssp ETTCCEEECCEEE--CCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred ecCCeEEEEeEeE--cCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHCEE
Confidence 4699999999986 43 55679998743 1 110 024454443 2345579999999999999
Q ss_pred EEEEEEcC
Q psy16902 63 YTVRVTNN 70 (90)
Q Consensus 63 y~C~~~~~ 70 (90)
|.|.+.+.
T Consensus 91 Y~C~~~~~ 98 (116)
T 1tvd_A 91 YYCAFTLP 98 (116)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 99999874
No 399
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.82 E-value=2.8e-07 Score=46.61 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=48.5
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c---CC-------------CCceEEEEe--CCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L---PA-------------SSRATTTFK--FGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~---~~-------------~~~~~~~~~--~~~~~~~~~~~~~ 57 (90)
..|+++.|.|.+. +.+ .+.+.|++++ .. + .. ..++..... .+...|.|.++..
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (220)
T 1pz5_B 13 QPGGSMKLSCVAS--GFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRA 90 (220)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cCCCeEEEEEEEc--CCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCH
Confidence 4699999999987 655 6889999753 11 1 00 235544432 2345799999999
Q ss_pred CCCeEEEEEEEcCCc
Q psy16902 58 HDSGEYTVRVTNNSG 72 (90)
Q Consensus 58 ~~~g~y~C~~~~~~~ 72 (90)
.|.|.|.|.+.+..+
T Consensus 91 ~D~G~Y~C~~~~~~~ 105 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVG 105 (220)
T ss_dssp GGCEEEEEEEECTTS
T ss_pred HHCEEEEEEEecCCc
Confidence 999999999998743
No 400
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.82 E-value=7e-08 Score=49.89 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=51.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. . .+ ....++..... .+...|.|.++...|
T Consensus 15 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 15 KPGASVKISCKTS--GYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSED 92 (256)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEEe--cccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCccc
Confidence 5699999999987 655 6789998632 1 01 01134444322 234569999999999
Q ss_pred CeEEEEEEEcC----CcceEeEEEEEEe
Q psy16902 60 SGEYTVRVTNN----SGSAESTALLSVQ 83 (90)
Q Consensus 60 ~g~y~C~~~~~----~~~~~~~~~l~v~ 83 (90)
.|.|.|.+.+. .+.......|.|.
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~ 120 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVS 120 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEEC
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEc
Confidence 99999999886 2223333455554
No 401
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.81 E-value=4.8e-08 Score=51.29 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=48.1
Q ss_pred CCCceEEEEEEEccCC-CC-CcEEEEeeC--CEEcC------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVG-DP-SMRVDWFIN--GRPLP------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~-~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|.+. + .+ .+.+.|++. +..+. ...++..........|.|.++...|.|.|.|.
T Consensus 152 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 229 (280)
T 3fku_X 152 GLRQTATLTCTGN--SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCS 229 (280)
T ss_dssp CTTCCEEEEEECC--CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEE
T ss_pred ecCCCEEEEEEec--CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEE
Confidence 5699999999986 5 33 478999873 21110 12445554455556799999999999999999
Q ss_pred EEcCC
Q psy16902 67 VTNNS 71 (90)
Q Consensus 67 ~~~~~ 71 (90)
+.+..
T Consensus 230 ~~~~~ 234 (280)
T 3fku_X 230 TWDSS 234 (280)
T ss_dssp EEETT
T ss_pred EecCC
Confidence 98865
No 402
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.81 E-value=5.9e-09 Score=53.07 Aligned_cols=71 Identities=21% Similarity=0.262 Sum_probs=47.5
Q ss_pred CCceEEEEEEEccCCCCC--cEEEEeeCCEEcCCCCceE-EE--Ee---CCeEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 4 QKRKIHFEARIEPVGDPS--MRVDWFINGRPLPASSRAT-TT--FK---FGFISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~--~~~~w~~~~~~~~~~~~~~-~~--~~---~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
+|+.+.|.|.+. +.++ +.+.|++++..+....... .. .+ .....+.+......|.|.|.|.+.|......
T Consensus 149 ~g~~v~L~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 149 QANKATLVCLIS--DFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp TTSCCCEEECCC--BCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred cCCceEEEEEEE--EEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 477899999886 6433 4899999998775431100 00 00 0123577788888899999999999866543
Q ss_pred e
Q psy16902 76 S 76 (90)
Q Consensus 76 ~ 76 (90)
.
T Consensus 227 ~ 227 (234)
T 2j6e_L 227 K 227 (234)
T ss_dssp E
T ss_pred E
Confidence 3
No 403
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.81 E-value=1.1e-07 Score=43.83 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=50.2
Q ss_pred CCCceEEEEEEEccCCC---CCcEEEEeeCC-----EEc-C------------CCCceEEEEeC--CeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD---PSMRVDWFING-----RPL-P------------ASSRATTTFKF--GFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~---~~~~~~w~~~~-----~~~-~------------~~~~~~~~~~~--~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. .. +...+.|++.. ..+ . ...++...... ....|.|.++...|
T Consensus 11 ~~G~~v~L~C~~~--~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~D 88 (116)
T 3bj9_1 11 ALGTTIRLTCTLR--NDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPED 88 (116)
T ss_dssp ETTCCEEEEEEEC--SSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEee--cCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChhH
Confidence 4699999999986 33 45679998742 111 0 12344443322 24479999999999
Q ss_pred CeEEEEEEEcCCcc-eEeEEEEEEec
Q psy16902 60 SGEYTVRVTNNSGS-AESTALLSVQG 84 (90)
Q Consensus 60 ~g~y~C~~~~~~~~-~~~~~~l~v~~ 84 (90)
.|.|.|.+.+.... ......|.|.+
T Consensus 89 sG~Y~C~~~~~~~~~fg~gT~L~V~~ 114 (116)
T 3bj9_1 89 EAMYYCAMGARSTHVFGSGTQLTVLS 114 (116)
T ss_dssp CEEEEEEECCSSCCEECCCEEEEEES
T ss_pred CEEEEEEEeCCCCcEECCCEEEEEec
Confidence 99999998865321 22233555543
No 404
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.81 E-value=4.5e-10 Score=56.48 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=46.6
Q ss_pred CCceEEEEEEEccCCC-CC-cEEEEeeCCEEcCCCCceE-EEEeC-C---eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVGD-PS-MRVDWFINGRPLPASSRAT-TTFKF-G---FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~-~~-~~~~w~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
+|+.+.|.|.+. +. |+ +.+.|++++..+....... ..... . ...|.+..+...|.|.|.|.+.|..+.
T Consensus 127 ~g~~v~L~C~~~--g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 127 RTNKATLVCLVN--DFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp HTTEECCCEEEE--EEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred cCCceEEEEEEE--eeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 477899999987 65 44 7999999998875432110 00000 0 123667777778999999999998654
No 405
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.80 E-value=9.8e-08 Score=48.68 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=47.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. .. + . ...++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (227)
T 1mju_H 13 KPGASVKLSCKAS--GYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDD 90 (227)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEec--CCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCccc
Confidence 5699999999987 665 6789999753 11 1 0 0235544432 245679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 ~G~Y~C~~~~~ 101 (227)
T 1mju_H 91 SAVYYCANKLG 101 (227)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEECCC
Confidence 99999999875
No 406
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.80 E-value=7.1e-09 Score=52.37 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=45.7
Q ss_pred CCCceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCCCceEEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVG-DPSM-RVDWFINGRPLPASSRATTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
..|+.+.|.|.+. + .|.| .+.|++++..+............. ...|.+.... .+.|.|.|.+.|..+.....
T Consensus 137 ~~g~~v~L~C~~~--g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~ 213 (219)
T 1c1e_H 137 QTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVD 213 (219)
T ss_dssp CCSSEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEE
T ss_pred ccCCeEEEEEEcc--cccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEE
Confidence 4688999999997 7 7888 999999986532110000000011 1246664433 35699999999987665443
Q ss_pred E
Q psy16902 78 A 78 (90)
Q Consensus 78 ~ 78 (90)
.
T Consensus 214 ~ 214 (219)
T 1c1e_H 214 K 214 (219)
T ss_dssp E
T ss_pred E
Confidence 3
No 407
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.80 E-value=8.9e-09 Score=59.89 Aligned_cols=81 Identities=16% Similarity=0.116 Sum_probs=54.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC-----cceEeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS-----GSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~-----~~~~~~ 77 (90)
..|+.+.|.|.+. + |.+.+.|.+++..+........... ...|.|..+...|.|.|.|.+.+.. ......
T Consensus 546 ~~g~~~~L~C~~~--s-p~a~v~W~~~~~~l~~~~~~~~~~~--~~~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~~~~ 620 (663)
T 1olz_A 546 KHGGTAELKCSQK--S-NLARVFWKFQNGVLKAESPKYGLMG--RKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAK 620 (663)
T ss_dssp ETTSCEEECCCCS--C-TTCEEEEEESSSBCCCCSSSBCCTT--TTCEEECSCCGGGCEEEEEEEEEECSSSEEEEEEEE
T ss_pred ecCCcEEEEccCC--C-CCCcEEEEECCeeccccCcceEEec--CCeEEEEecCcccCeEEEEEEEECccCCCceEEEEE
Confidence 3588899999875 6 9999999999876543322111111 1248889999999999999998873 223455
Q ss_pred EEEEEecCCCC
Q psy16902 78 ALLSVQGRREG 88 (90)
Q Consensus 78 ~~l~v~~~~~~ 88 (90)
..|.|..+|.+
T Consensus 621 ~~l~V~v~P~~ 631 (663)
T 1olz_A 621 HVLEVKVVPKP 631 (663)
T ss_dssp EEEEEEC----
T ss_pred EEEEEEeCCcc
Confidence 57777777654
No 408
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.80 E-value=4.6e-07 Score=41.86 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=46.9
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeC--CE--E-c----------CCCCceEEEE--eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFIN--GR--P-L----------PASSRATTTF--KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~--~~--~-~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. ... ...+.|++. +. . + ....++.... ......|.|.++...|.|.|.
T Consensus 12 ~~G~~vtL~C~~~--~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 89 (117)
T 3bp6_A 12 SEGANATFTCSLS--NWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYL 89 (117)
T ss_dssp CTTCCEEEEEEES--SCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEEEE
T ss_pred eCCCCEEEEeEee--cCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEEEE
Confidence 5699999999986 443 467999874 21 1 1 1124555543 334557999999999999999
Q ss_pred EEEEcCC
Q psy16902 65 VRVTNNS 71 (90)
Q Consensus 65 C~~~~~~ 71 (90)
|.+.+..
T Consensus 90 C~~~~~~ 96 (117)
T 3bp6_A 90 CGAISLH 96 (117)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9988643
No 409
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.80 E-value=5.9e-08 Score=50.52 Aligned_cols=65 Identities=22% Similarity=0.167 Sum_probs=44.2
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c-C--C------C---C-ceEEEE-eCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L-P--A------S---S-RATTTF-KFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~-~--~------~---~-~~~~~~-~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|+++.|.|.+. .+.+.+.|++.. .. + . . . . ++.... ......|.|.++...|.|.|
T Consensus 40 ~~G~~v~L~C~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 116 (270)
T 3qib_D 40 GQGQKAKMRCIPE---KGHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALY 116 (270)
T ss_dssp ETTSCEEEEEECC---TTCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEE
T ss_pred cCCCCEEEEEEec---CCCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEE
Confidence 4699999999874 477899999721 10 0 0 0 0 0 333321 22345799999999999999
Q ss_pred EEEEEcC
Q psy16902 64 TVRVTNN 70 (90)
Q Consensus 64 ~C~~~~~ 70 (90)
.|.+.+.
T Consensus 117 ~C~~~~~ 123 (270)
T 3qib_D 117 LCASSLN 123 (270)
T ss_dssp EEEEESC
T ss_pred EEEEecC
Confidence 9999863
No 410
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.79 E-value=1.2e-07 Score=44.29 Aligned_cols=65 Identities=14% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E----EcCCCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R----PLPASSRATTTF--KFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
.+|++++|.|.+. +. +.+.+.|++.. . .+....++.... ......|.|.++..+|.|.|.|.+..
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 13 ETGESLTINCVVR--DSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp ETTCCEEEEEEEC--SCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ecCCcEEEEeEcc--CCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 4799999999986 44 35679999753 1 122234554432 23456799999999999999999874
No 411
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.79 E-value=4.1e-08 Score=50.46 Aligned_cols=66 Identities=9% Similarity=0.151 Sum_probs=46.8
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc------C-----------CCCceEEEE--eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL------P-----------ASSRATTTF--KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~------~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. ..+ . ...++.... ......|.|.++...|
T Consensus 140 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 217 (247)
T 1svz_A 140 KPGETVKISCKAT--NYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNED 217 (247)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEEc--CcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhH
Confidence 4689999999987 664 5689999853 110 0 023444332 2334579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.|.
T Consensus 218 sG~Y~C~a~n~ 228 (247)
T 1svz_A 218 TATYFCVRDRH 228 (247)
T ss_dssp CEEEEEEEEEG
T ss_pred CEEEEEEEecc
Confidence 99999999985
No 412
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.79 E-value=3.6e-08 Score=46.29 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=50.6
Q ss_pred CCCceEEEEEEEccCCC---CCcEEEEeeCC--E---Ec-C------------CCCceEEEE--eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD---PSMRVDWFING--R---PL-P------------ASSRATTTF--KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~---~~~~~~w~~~~--~---~~-~------------~~~~~~~~~--~~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. ....+.|++.. . .+ . ...++.... ......|.|.++...|
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~D 90 (126)
T 2h32_A 13 ALGTTIRLTCTLR--NDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPED 90 (126)
T ss_dssp ETTCCEEEEEEEC--TTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred CCCCCEEEEEEec--CCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCChhH
Confidence 4699999999986 43 24678998642 1 11 0 023554442 2345679999999999
Q ss_pred CeEEEEEEEcCCcceEeEEEEEE
Q psy16902 60 SGEYTVRVTNNSGSAESTALLSV 82 (90)
Q Consensus 60 ~g~y~C~~~~~~~~~~~~~~l~v 82 (90)
.|.|.|.+.+..+.......+.|
T Consensus 91 sG~Y~C~~~~~~~~~~~~t~l~v 113 (126)
T 2h32_A 91 EAMYYCAMGARSSEKEEREREWE 113 (126)
T ss_dssp CEEEEEEEECSCCCCCCTTCC--
T ss_pred CEEEEEEEEcCCCCcceeEEEee
Confidence 99999999887655443334444
No 413
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.79 E-value=1.9e-08 Score=46.30 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC-------EE-cC---------CCCceEEEE--eCCeEEEEEcCCCCCCCe
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING-------RP-LP---------ASSRATTTF--KFGFISLDLLSIVLHDSG 61 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~-------~~-~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~g 61 (90)
..|++++|.|.+. .. ....+.|++.. .. +. ...++.+.. ..+...|.|.++...|.|
T Consensus 10 ~~G~~v~L~C~~~--~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG 87 (115)
T 2or7_A 10 LAGHPVTLPCIYS--THLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGG 87 (115)
T ss_dssp ETTSCEEECCBCC--HHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCE
T ss_pred EcCCCEEEEEEee--cCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCE
Confidence 4689999999875 21 24678999864 11 10 112332221 112346999999999999
Q ss_pred EEEEEEEcCCcceEeEEEEEEec
Q psy16902 62 EYTVRVTNNSGSAESTALLSVQG 84 (90)
Q Consensus 62 ~y~C~~~~~~~~~~~~~~l~v~~ 84 (90)
.|.|.+............|.|..
T Consensus 88 ~Y~C~v~~~~~~~~~~v~L~V~~ 110 (115)
T 2or7_A 88 PYCCVVEIPGAFHFVDYMLEVKP 110 (115)
T ss_dssp EEEEEECCTTSCEEEEEEEEEES
T ss_pred EEEEEEECCCceeEEEEEEEEcC
Confidence 99999987654445555666643
No 414
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.79 E-value=5.9e-07 Score=42.56 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=52.3
Q ss_pred CCCceEEEEEEEccCCCC-CcEEEEeeC--CE---Ec----------CCCCceEEEE--eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP-SMRVDWFIN--GR---PL----------PASSRATTTF--KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~-~~~~~w~~~--~~---~~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. ... ...+.|++. +. .+ ....++.... ......|.|.++...|.|.|.
T Consensus 22 ~~G~~vtL~C~~~--~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 99 (134)
T 3bik_B 22 SEGANATFTCSLS--NWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYL 99 (134)
T ss_dssp ETTSCEEEEEEES--SCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEEE
T ss_pred eCCCCEEEEEEeC--CCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEEE
Confidence 4699999999986 433 467999874 21 11 0134555543 234567999999999999999
Q ss_pred EEEEcCCcc----eEeEEEEEEec
Q psy16902 65 VRVTNNSGS----AESTALLSVQG 84 (90)
Q Consensus 65 C~~~~~~~~----~~~~~~l~v~~ 84 (90)
|.+...... ......|.|.+
T Consensus 100 C~~~~~~~~~~~~~~~gt~L~V~~ 123 (134)
T 3bik_B 100 CGAISLHPKAKIEESPGAELVVTE 123 (134)
T ss_dssp EEEEECSSSCEEEECCCEEEEEEC
T ss_pred EEEEeCCCCceEEEcCCEEEEEeC
Confidence 998765321 12244666654
No 415
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.79 E-value=2.2e-07 Score=47.65 Aligned_cols=66 Identities=9% Similarity=0.077 Sum_probs=46.6
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c------------CCCCceEEEE-eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L------------PASSRATTTF-KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. .+.+.+.|+++. .. + ....++.... ......|.|.++...|.|.|.
T Consensus 12 ~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (238)
T 1bec_A 12 VTGGKVTLSCQQT---NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYF 88 (238)
T ss_dssp ETTCCEEEEEEES---SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEE
T ss_pred eCCCcEEEEEEeC---CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEE
Confidence 4699999999974 457899999753 10 0 0123444332 133457999999999999999
Q ss_pred EEEEcCC
Q psy16902 65 VRVTNNS 71 (90)
Q Consensus 65 C~~~~~~ 71 (90)
|.+.+..
T Consensus 89 C~~~~~~ 95 (238)
T 1bec_A 89 CASGGGR 95 (238)
T ss_dssp EEEESCT
T ss_pred EEEecCC
Confidence 9999863
No 416
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.79 E-value=1.2e-07 Score=49.49 Aligned_cols=67 Identities=16% Similarity=0.237 Sum_probs=48.2
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. .. + . ...++....+ .+...|.|.++...|
T Consensus 19 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 96 (261)
T 2xqy_G 19 KPGASVKMSCKAS--GYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSED 96 (261)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEeC--CcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCccc
Confidence 5699999999987 665 6789999763 11 1 1 0235544432 234579999999999
Q ss_pred CeEEEEEEEcCC
Q psy16902 60 SGEYTVRVTNNS 71 (90)
Q Consensus 60 ~g~y~C~~~~~~ 71 (90)
.|.|.|.+.+..
T Consensus 97 sG~Y~C~~~~~~ 108 (261)
T 2xqy_G 97 SAVYYCGRLGYV 108 (261)
T ss_dssp CEEEEEEEECTT
T ss_pred CeEEEEEEecCC
Confidence 999999999853
No 417
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.79 E-value=8e-09 Score=51.91 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=46.9
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEeeCCEEcCCCCceEEEEeC---CeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFINGRPLPASSRATTTFKF---GFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
..|+.+.|.|.+. +. |.| .+.|++++..+............ ....+.+......+ |.|.|.+.|..+.....
T Consensus 131 ~~g~~v~L~C~~~--g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 131 QTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCSSEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCcEEEEEEEe--eEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 4688999999987 76 777 99999988653211000000111 12346777776656 99999999987765433
No 418
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.79 E-value=6.1e-09 Score=52.42 Aligned_cols=69 Identities=9% Similarity=0.137 Sum_probs=47.1
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCCEEcCCCCc-eEEEEeC----CeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFINGRPLPASSR-ATTTFKF----GFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+++.|.|.+. +.+ .+.+.|++++..+..... ....... ....|.|.++...|.|.|.|.+.+..+.
T Consensus 16 ~~G~~v~L~C~~~--g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 16 TITLTPKVTCVVV--DISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp STTSCCEEEEEEE--EECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred ccCCceEEEEEEe--CcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 4699999999987 663 348999999876543210 0000001 1235788888888999999999998764
No 419
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.79 E-value=4.1e-08 Score=45.32 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCC--E---Ec-----CC-----CCceEEE--EeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFING--R---PL-----PA-----SSRATTT--FKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~--~---~~-----~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. +. +.+.+.|++.. . .+ .. ..++... .......|.|.++..+|.|.|.
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 90 (116)
T 1fo0_A 13 MEKTTVTMDCVYE--TQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYF 90 (116)
T ss_dssp ETTCCEEECCEEC--CCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred ecCCcEEEEeEec--CCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 4699999999986 54 55689998742 1 11 00 1344443 2234557999999999999999
Q ss_pred EEEEc
Q psy16902 65 VRVTN 69 (90)
Q Consensus 65 C~~~~ 69 (90)
|.+.+
T Consensus 91 C~~~~ 95 (116)
T 1fo0_A 91 CAMRG 95 (116)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99887
No 420
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.78 E-value=3.5e-08 Score=45.34 Aligned_cols=65 Identities=9% Similarity=0.176 Sum_probs=44.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec-C--CC----------CceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL-P--AS----------SRATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~-~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. ..+.+.+.|++.. . .+ . .. .++........ .|.|.++...|.|.|.
T Consensus 14 ~~G~~vtL~C~~~--~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~~~Dsg~Y~ 90 (112)
T 1fo0_B 14 PRGQAVNLRCILK--NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVANMSQGRTLY 90 (112)
T ss_dssp CTTCCEEEEEEES--CTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEESCCSCEEEE
T ss_pred ecCCcEEEEEEeC--CCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCCHhHCEEEE
Confidence 5799999999986 5567789998742 1 11 0 10 23333222222 7999999999999999
Q ss_pred EEEEcC
Q psy16902 65 VRVTNN 70 (90)
Q Consensus 65 C~~~~~ 70 (90)
|.+.+.
T Consensus 91 C~~~~~ 96 (112)
T 1fo0_B 91 CTCSAD 96 (112)
T ss_dssp EEEESS
T ss_pred EEEEcC
Confidence 998864
No 421
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.78 E-value=2.4e-08 Score=51.73 Aligned_cols=80 Identities=21% Similarity=0.169 Sum_probs=49.9
Q ss_pred CCCceEEEEEEEc-cCCCCCcEEEEeeCCEEcCCC------------------CceEEEE--eCCeEEEEEcCCCCCCCe
Q psy16902 3 PQKRKIHFEARIE-PVGDPSMRVDWFINGRPLPAS------------------SRATTTF--KFGFISLDLLSIVLHDSG 61 (90)
Q Consensus 3 ~~g~~~~l~C~~~-~~~~~~~~~~w~~~~~~~~~~------------------~~~~~~~--~~~~~~~~~~~~~~~~~g 61 (90)
.+|+.+.|.|.+. ..+.+.+.+.|++++...... .+..+.. ......|.|.++...|.|
T Consensus 18 ~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 97 (268)
T 3mj6_A 18 HVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEG 97 (268)
T ss_dssp ETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCE
T ss_pred ecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCE
Confidence 4689999999764 114566789999865322111 2222210 011235899999999999
Q ss_pred EEEEEEEcCCcce--EeEEEEEE
Q psy16902 62 EYTVRVTNNSGSA--ESTALLSV 82 (90)
Q Consensus 62 ~y~C~~~~~~~~~--~~~~~l~v 82 (90)
.|.|.+.+..+.. .....|.|
T Consensus 98 ~Y~C~~~~~~~~~~~~~~~~l~V 120 (268)
T 3mj6_A 98 IYTCEIRLKNESMVMKKPVELWV 120 (268)
T ss_dssp EEEEEEEETTCCCEEEEEEEEEE
T ss_pred EEEEEEEecCCcceEEEEEEEEE
Confidence 9999999865443 33334444
No 422
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.78 E-value=2.1e-08 Score=50.46 Aligned_cols=70 Identities=26% Similarity=0.338 Sum_probs=43.8
Q ss_pred CceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCCCce-E-EEEeCCe---EEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 5 KRKIHFEARIEPVG-DPSM-RVDWFINGRPLPASSRA-T-TTFKFGF---ISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 5 g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
|+.+.|.|.+. + .|.+ .+.|++++..+...... . ....... ..+.+......|.|.|.|.+.|..+....
T Consensus 136 ~~~v~L~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 136 ENKATLVCLIS--NFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEK 212 (218)
T ss_dssp TTEEEEEEEEE--EEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEC--cccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccc
Confidence 57899999987 6 4666 89999999887542111 0 0001111 22566666667799999999998765443
No 423
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.77 E-value=9.1e-09 Score=53.03 Aligned_cols=67 Identities=16% Similarity=0.153 Sum_probs=46.0
Q ss_pred CceEEEEEEEccCCC-CC-cEEEEeeCCEEcCCC-Cc-eEEEEeC-----CeEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 5 KRKIHFEARIEPVGD-PS-MRVDWFINGRPLPAS-SR-ATTTFKF-----GFISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 5 g~~~~l~C~~~~~~~-~~-~~~~w~~~~~~~~~~-~~-~~~~~~~-----~~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
|+.+.|.|.+. +. |. +.+.|++++..+... .. ....... ....|.+......|.|.|.|.+.|....
T Consensus 169 g~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 169 SGGASVVCFLN--NFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp TTEEEEEEEEE--EEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCcEEEEEEEe--cccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 66899999987 63 43 469999999876553 11 0000000 1245888888888999999999997654
No 424
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.77 E-value=1.2e-07 Score=48.76 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=44.1
Q ss_pred CCceEEEEEEEccCC-CCCc-EEEEeeCCEEcCCC------Cc-eEEEEe--CC---eEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 4 QKRKIHFEARIEPVG-DPSM-RVDWFINGRPLPAS------SR-ATTTFK--FG---FISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~-~~~w~~~~~~~~~~------~~-~~~~~~--~~---~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
.|..+.|.|.+. + .|.| .+.|++++..+... .. ...... .. ...+.+......+.|.|.|.+.|
T Consensus 132 ~~~~~~L~C~~~--g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n 209 (248)
T 3pv7_A 132 KENEDKYMCESS--GFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRH 209 (248)
T ss_dssp ----CEEEEEEE--EEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEEC
T ss_pred cCCCcEEEEEEc--cEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEEC
Confidence 466778999997 7 7888 99999998543211 00 001111 11 13466777777888999999999
Q ss_pred CCcc--eEeEEEEEE
Q psy16902 70 NSGS--AESTALLSV 82 (90)
Q Consensus 70 ~~~~--~~~~~~l~v 82 (90)
..+. ......|.|
T Consensus 210 ~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 210 ASLHTPLRSNFTLTA 224 (248)
T ss_dssp TTCSSCEEEEECC--
T ss_pred CCCCCCcEEEEEEEE
Confidence 8775 333444444
No 425
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.76 E-value=3.7e-08 Score=52.17 Aligned_cols=82 Identities=17% Similarity=0.236 Sum_probs=52.0
Q ss_pred CCCceEEEEEEEccCCCCCc-----EEEEeeCCEEc-------------CCCCceEEEE-----eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSM-----RVDWFINGRPL-------------PASSRATTTF-----KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~-----~~~w~~~~~~~-------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+.+ .+.|++++... ....+..... ......|.|.++...|
T Consensus 13 ~~G~~v~L~C~v~--~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (313)
T 4fqp_A 13 FLGDSVTLPCYLQ--VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVED 90 (313)
T ss_dssp BTTSCEEECCEEE--CCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGG
T ss_pred ecCCCEEEEEEEE--CCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhh
Confidence 4699999999987 65544 48999986421 1112222211 0112358999999999
Q ss_pred CeEEEEEEEc-CCcceEeEEEEEEecCC
Q psy16902 60 SGEYTVRVTN-NSGSAESTALLSVQGRR 86 (90)
Q Consensus 60 ~g~y~C~~~~-~~~~~~~~~~l~v~~~~ 86 (90)
.|.|.|.+.+ ..+.......|.+...|
T Consensus 91 ~G~Y~C~v~~~~~~~~~~~~~l~v~~~P 118 (313)
T 4fqp_A 91 EGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (313)
T ss_dssp CEEEEEEEECSSSCEEEEEEEECCBBCC
T ss_pred CEEEEEEEeeccCcceeeeeeeeeccCC
Confidence 9999998764 44555555555554444
No 426
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.76 E-value=1.2e-07 Score=44.65 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=51.4
Q ss_pred CCCceEEEEEEEccC-----CCCCcEEEEeeCCEE------cCC-----------CCceEEEEe--CCeEEEEEcCCCCC
Q psy16902 3 PQKRKIHFEARIEPV-----GDPSMRVDWFINGRP------LPA-----------SSRATTTFK--FGFISLDLLSIVLH 58 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~-----~~~~~~~~w~~~~~~------~~~-----------~~~~~~~~~--~~~~~~~~~~~~~~ 58 (90)
.+|+++.|.|.+... ......+.|++.... +.. ..|+.+..+ .+...|.|.++...
T Consensus 19 ~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 98 (132)
T 1nko_A 19 QEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMS 98 (132)
T ss_dssp ETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCCGG
T ss_pred cCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccCcc
Confidence 468999999998511 124578999986431 110 134444321 22346999999999
Q ss_pred CCeEEEEEEEcCCcce---EeEEEEEEecCC
Q psy16902 59 DSGEYTVRVTNNSGSA---ESTALLSVQGRR 86 (90)
Q Consensus 59 ~~g~y~C~~~~~~~~~---~~~~~l~v~~~~ 86 (90)
|.|.|.|.+.+..... .....|.|.+.+
T Consensus 99 DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~ 129 (132)
T 1nko_A 99 DAGRYFFRMEKGNIKWNYKYDQLSVNVTALT 129 (132)
T ss_dssp GCEEEEEEEEETTEEEECTTSCEEEEEECCC
T ss_pred cCeeEEEEEEcCCCcccccCCceEEEecccC
Confidence 9999999988753111 124566665544
No 427
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.76 E-value=6.2e-09 Score=52.29 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=48.2
Q ss_pred CCceEEEEEEEccCCC--CCcEEEEeeCCEEcCCCCce---EEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 4 QKRKIHFEARIEPVGD--PSMRVDWFINGRPLPASSRA---TTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~--~~~~~~w~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
.|+.+.|.|.+. +. +.+.+.|++++..+...... ....... ...+.+......|.|.|.|.+.+..+...
T Consensus 125 ~g~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~ 202 (211)
T 3tv3_L 125 QANKATLVCLIS--DFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 202 (211)
T ss_dssp HTTCEEEEEEEE--EEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEE
T ss_pred cCCCeEEEEEee--eecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEE
Confidence 478899999987 64 45889999999887542100 0000111 13467777777789999999999876554
Q ss_pred eE
Q psy16902 76 ST 77 (90)
Q Consensus 76 ~~ 77 (90)
..
T Consensus 203 ~~ 204 (211)
T 3tv3_L 203 KT 204 (211)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 428
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.75 E-value=9.1e-08 Score=49.17 Aligned_cols=66 Identities=20% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc-------C---------CCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL-------P---------ASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~-------~---------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. ..+ . ...++....+ .....|.|.++...|.
T Consensus 135 ~~G~~v~L~C~~~--g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 212 (242)
T 2znx_A 135 KPSQTLSLTCSVT--GDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 212 (242)
T ss_dssp CTTSCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGC
T ss_pred cCCCeEEEEEEEE--ccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcC
Confidence 4689999999987 665 5789999842 211 0 1234444322 2345799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 213 G~Y~C~a~~~ 222 (242)
T 2znx_A 213 ATYYCANXDG 222 (242)
T ss_dssp EEEEEEETTS
T ss_pred EEEEEeccCC
Confidence 9999999874
No 429
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.75 E-value=3.7e-07 Score=46.39 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=47.0
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEee-CCEEcCCCCce-EEEEeCC---eEEEEEcCCCC--CCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFI-NGRPLPASSRA-TTTFKFG---FISLDLLSIVL--HDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~-~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~--~~~g~y~C~~~~~~~~ 73 (90)
..|+.+.|.|.+. +. |.| .+.|++ ++..+...... ....... ...+.+..... .|.|.|.|.+.+..+.
T Consensus 139 ~~g~~v~L~C~~~--g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 139 NPSSTVAVGCLAQ--DFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp CSSSEEEEEEEEE--EEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred CCCCcEEEEEEEE--EEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 3688999999987 65 666 899999 88766430000 0000111 12466666654 6789999999998776
Q ss_pred eEeE
Q psy16902 74 AEST 77 (90)
Q Consensus 74 ~~~~ 77 (90)
....
T Consensus 217 ~~~~ 220 (223)
T 1dee_B 217 KEKD 220 (223)
T ss_dssp EEEE
T ss_pred Cccc
Confidence 5543
No 430
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.75 E-value=8.7e-08 Score=48.96 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=45.8
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc------C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL------P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~------~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.| .+.+.|+++. ..+ . ...++..... .....|.|.++...|
T Consensus 132 ~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 209 (240)
T 1moe_A 132 EPGASVKLSCTAS--GFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSED 209 (240)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eCCCcEEEEEEEc--CccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHH
Confidence 4689999999997 766 4689999852 111 0 1124443322 334569999999999
Q ss_pred CeEEEEEEEc
Q psy16902 60 SGEYTVRVTN 69 (90)
Q Consensus 60 ~g~y~C~~~~ 69 (90)
.|.|.|.+..
T Consensus 210 ~G~Y~C~a~~ 219 (240)
T 1moe_A 210 TAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEEe
Confidence 9999999984
No 431
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.75 E-value=2.6e-08 Score=50.72 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=47.0
Q ss_pred CCceEEEEEEEccCC-CC-CcEEEEeeCCEEcCCCC-ce-EEEE--eCC---eEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 4 QKRKIHFEARIEPVG-DP-SMRVDWFINGRPLPASS-RA-TTTF--KFG---FISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~-~~~~~w~~~~~~~~~~~-~~-~~~~--~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
.|+.+.|.|.+. + .| .+.+.|++++..+.... .. .... +.. ...+.+......|.|.|.|.+.|.....
T Consensus 149 ~g~~v~l~C~~~--~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 149 KSGTASVVCLLN--NFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp HHTEEEEEEEEE--EEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cCCceEEEEEEc--ccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 367899999987 6 34 58999999998776421 00 0000 010 2346777778888999999999986543
Q ss_pred E
Q psy16902 75 E 75 (90)
Q Consensus 75 ~ 75 (90)
.
T Consensus 227 ~ 227 (237)
T 3sob_L 227 P 227 (237)
T ss_dssp C
T ss_pred c
Confidence 3
No 432
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.75 E-value=9.9e-08 Score=53.00 Aligned_cols=68 Identities=15% Similarity=0.192 Sum_probs=49.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeC--CE---Ec--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFIN--GR---PL--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~--~~---~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+.+.|.|.+. +.+ .+.+.|+++ +. .+ ....++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (457)
T 1hzh_H 13 KPGASVKVSCQAS--GYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSAD 90 (457)
T ss_dssp CTTCCEEECEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEec--CccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCccc
Confidence 5699999999987 665 678999974 21 11 01245554432 345679999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (457)
T 1hzh_H 91 TAVYYCARVGPYS 103 (457)
T ss_dssp CEEEEEEECCCCC
T ss_pred CEEEEEEEecCCc
Confidence 9999999988754
No 433
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.74 E-value=3.9e-08 Score=46.13 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=44.5
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCE----EcC-C-C---CceEEE-----EeCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGR----PLP-A-S---SRATTT-----FKFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~----~~~-~-~---~~~~~~-----~~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. +. +.+.+.|++... .+. . . .++... .......|.|.++...|.|.|.|.+
T Consensus 16 ~~G~~vtL~C~~~--~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 93 (127)
T 2jju_A 16 AAGESATLRCAMT--SLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 93 (127)
T ss_dssp ETTSCEEECCEES--CCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEE
T ss_pred eCCCCEEEEEEEe--CCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEE
Confidence 4689999999986 54 567899998651 111 0 0 123221 0112346999999999999999998
Q ss_pred EcC
Q psy16902 68 TNN 70 (90)
Q Consensus 68 ~~~ 70 (90)
.+.
T Consensus 94 ~~~ 96 (127)
T 2jju_A 94 FRK 96 (127)
T ss_dssp EEC
T ss_pred EcC
Confidence 875
No 434
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.74 E-value=2.2e-09 Score=55.31 Aligned_cols=70 Identities=10% Similarity=0.106 Sum_probs=47.6
Q ss_pred CCCCceEEEEEEEccCCC---CCc-EEEEeeCCEEcCCCCc-eEEEEe-C---CeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 2 DPQKRKIHFEARIEPVGD---PSM-RVDWFINGRPLPASSR-ATTTFK-F---GFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~---~~~-~~~w~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
...|+++.|.|.+. +. |.+ .+.|++++..+..... ...... . ....|.|..+...|.|.|.|.+.+..+
T Consensus 29 v~~G~~v~L~C~~~--g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 106 (239)
T 1i1c_A 29 LGGGLTPKVTCVVV--DISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAF 106 (239)
T ss_dssp TTSSSCCEEEEEEE--EECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSS
T ss_pred cccCCcEEEEEEEe--cCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccC
Confidence 35799999999987 65 666 8999998765432110 000000 0 123578888888899999999999876
Q ss_pred c
Q psy16902 73 S 73 (90)
Q Consensus 73 ~ 73 (90)
.
T Consensus 107 ~ 107 (239)
T 1i1c_A 107 P 107 (239)
T ss_dssp S
T ss_pred C
Confidence 4
No 435
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.74 E-value=6.6e-07 Score=45.28 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=46.4
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E--E-c---C-------------CCCceEEEEe--CCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R--P-L---P-------------ASSRATTTFK--FGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~--~-~---~-------------~~~~~~~~~~--~~~~~~~~~~~~~ 57 (90)
.+|+++.|.|.+. +. +.+.+.|++.. . . + . ...++....+ .+...|.|.++..
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 90 (221)
T 3m8o_H 13 QPGGSLKLSCAAS--GFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKS 90 (221)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCG
T ss_pred cCCCCEEEEEEcc--cccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCH
Confidence 4699999999987 53 36789998632 1 0 0 0 1134444422 3445699999999
Q ss_pred CCCeEEEEEEEcC
Q psy16902 58 HDSGEYTVRVTNN 70 (90)
Q Consensus 58 ~~~g~y~C~~~~~ 70 (90)
.|.|.|.|.+.+.
T Consensus 91 ~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 91 DDTAMYYCVIRGD 103 (221)
T ss_dssp GGCEEEEEEEESC
T ss_pred HHCEEEEEEEECC
Confidence 9999999999886
No 436
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.74 E-value=3.1e-07 Score=42.31 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=46.5
Q ss_pred CCCCceEEEEEEEccCCC-CCcEEEEeeC--CE-----Ec-C---------C---CCceEEEEeCCeEEEEEcCCCCCCC
Q psy16902 2 DPQKRKIHFEARIEPVGD-PSMRVDWFIN--GR-----PL-P---------A---SSRATTTFKFGFISLDLLSIVLHDS 60 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~-~~~~~~w~~~--~~-----~~-~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (90)
..+|++++|.|.+. +. ....+.|++. +. .+ . . ..++......+...|.|.++..+|.
T Consensus 12 v~~G~~vtL~C~~~--~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~Ds 89 (114)
T 2hp4_A 12 WNLGETVELKCQVL--LSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRRENE 89 (114)
T ss_dssp CCTTCCEEEEEEEC--CSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EcCCCCEEEEEEee--cCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEECCCCHHHC
Confidence 35799999999986 33 3567999863 22 11 0 0 2345444444456799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 90 g~Y~C~~~~~ 99 (114)
T 2hp4_A 90 GYYFCSALSN 99 (114)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEecC
Confidence 9999998864
No 437
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.74 E-value=1.4e-07 Score=47.39 Aligned_cols=63 Identities=21% Similarity=0.284 Sum_probs=45.2
Q ss_pred CCceEEEEEEEccCC-CCCcEEEEeeCCEEcCCCCceEEE----EeCC---eEEEEEcCCCCCCCeEEEEEEE
Q psy16902 4 QKRKIHFEARIEPVG-DPSMRVDWFINGRPLPASSRATTT----FKFG---FISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.|+.+.|.|.+. + .|.|.+.|++++..+......... .... ...|.+......|.|.|.|.+.
T Consensus 128 ~g~~v~l~C~~~--g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 128 ATGTVTIVCVAN--KYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTSEEEEEEEEE--EEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCcEeEEEEEe--cccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 488999999997 7 788999999999877532100000 0011 1347788888889999999998
No 438
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.73 E-value=1.5e-07 Score=43.35 Aligned_cols=66 Identities=11% Similarity=0.119 Sum_probs=46.2
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCE--------Ec----C----------CCCceEEEE--eCCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGR--------PL----P----------ASSRATTTF--KFGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~--------~~----~----------~~~~~~~~~--~~~~~~~~~~~~~~ 57 (90)
.+|++++|.|.+. +. ....+.|++... .+ . ...++.... ......|.|.++..
T Consensus 11 ~~G~~vtL~C~~~--~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 88 (115)
T 2atp_B 11 QTNHTAKMSCEVK--SISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNVKP 88 (115)
T ss_dssp CTTSCEEEEEECC--SSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSCCG
T ss_pred cCCCcEEEEEEec--CCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEECCCCH
Confidence 5699999999886 43 467899987431 11 0 124555544 23345799999999
Q ss_pred CCCeEEEEEEEcC
Q psy16902 58 HDSGEYTVRVTNN 70 (90)
Q Consensus 58 ~~~g~y~C~~~~~ 70 (90)
+|.|.|.|.+...
T Consensus 89 ~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 89 EDSDFYFCATVGS 101 (115)
T ss_dssp GGCEEEEEEEECS
T ss_pred HHCEEEEEeEccC
Confidence 9999999998753
No 439
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.73 E-value=1.7e-08 Score=53.24 Aligned_cols=73 Identities=10% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
..|+.+.|.|... .+.|.+.+.|++++..+......... .......+.+......|.|.|.|.+.|..+....
T Consensus 127 ~~~~~~~l~C~~~-~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 200 (308)
T 4fom_A 127 GGNETVAAICIAA-TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDI 200 (308)
T ss_dssp TCSCEEEEEEEEE-EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred cCCceEEEEEEec-CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCce
Confidence 3577899999753 27899999999998765422100000 0011235888899999999999999997655433
No 440
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.73 E-value=8.5e-08 Score=50.02 Aligned_cols=65 Identities=5% Similarity=-0.048 Sum_probs=43.9
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceE-EEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRAT-TTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.+|++++|.|... + +.+.+.|++++..+....... .........+.|..+...|.|.|.|.+.+.
T Consensus 19 ~~G~~VtL~C~~~--~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 84 (257)
T 1b6u_A 19 KSEETVILQCWSD--V-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVT 84 (257)
T ss_dssp ESSCCEEEEEEES--S-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECS
T ss_pred cCCCCEEEEEecC--C-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEecc
Confidence 4699999999974 3 467899999875331100000 000112346899999999999999999753
No 441
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.73 E-value=1.3e-08 Score=47.46 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-EcC-------------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-PLP-------------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVT 68 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~ 68 (90)
.+|++++|.|... .......+.|+++.. .+. ...|..+. ....+|.|.+++..|.|.|.|.+.
T Consensus 17 ~~G~~VtL~c~~~-~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~--~~~~sL~I~nv~~~DsG~Y~c~v~ 93 (121)
T 2edo_A 17 VSGSNVTLNISES-LPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD--PQSGALYISKVQKEDNSTYIMRVL 93 (121)
T ss_dssp ETTSCEEECCSSC-CCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEEC--TTTCCEEESSCCGGGCSEEEEEEE
T ss_pred EeCCCEEEeCCCC-CCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEe--CCCceEEEeCCCHHHCeEEEEEEE
Confidence 4699999999652 133456789998642 110 01232222 122369999999999999999998
Q ss_pred cCCc-ceEeEEEEEEecC
Q psy16902 69 NNSG-SAESTALLSVQGR 85 (90)
Q Consensus 69 ~~~~-~~~~~~~l~v~~~ 85 (90)
+..+ .......|.|.++
T Consensus 94 ~~~~~~~~~~~~L~V~~~ 111 (121)
T 2edo_A 94 KKTGNEQEWKIKLQVLDP 111 (121)
T ss_dssp ETTTEEEECCEECEEECC
T ss_pred cCCCcEEEEEEEEEEECC
Confidence 6543 3445567777654
No 442
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.72 E-value=2e-08 Score=50.53 Aligned_cols=70 Identities=14% Similarity=0.295 Sum_probs=41.8
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCCEEcCCCC--ceEEEEeCCeE---EEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFINGRPLPASS--RATTTFKFGFI---SLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
..|+++.|.|.+. +.+ .+.+.|++++..+.... .......+... .+.+......|.|.|.|.+.+..+.
T Consensus 16 ~~G~~v~L~C~~~--g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~ 93 (207)
T 1l6x_A 16 MISRTPEVTCVVV--DVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 93 (207)
T ss_dssp CTTSCCEEEEEEE--EECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred ecCCceEEEEEEe--cccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCC
Confidence 4699999999987 654 34899999997664321 00011111111 1222222223489999999998765
Q ss_pred e
Q psy16902 74 A 74 (90)
Q Consensus 74 ~ 74 (90)
.
T Consensus 94 ~ 94 (207)
T 1l6x_A 94 A 94 (207)
T ss_dssp S
T ss_pred c
Confidence 3
No 443
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.72 E-value=3.3e-08 Score=45.08 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=43.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCC--CCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPA--SSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS 71 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~ 71 (90)
..|++++|.|... .....+.|++++..... ..............+.|..+...+.|.|.|...+..
T Consensus 21 ~~G~~VtL~C~~~---~~~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~~~~~ 88 (106)
T 3kgr_A 21 PLGSHVTFVCRGP---VGVQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPP 88 (106)
T ss_dssp ETTCCEEEEEEEC---TTCCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCeEEEEEEcc---CCCcEEEEEECCCccccccccccccCCCCcceEEEecCCCcCCCceEEEEeeCCC
Confidence 4689999999864 23356889998753310 001111001123468899999999999999987753
No 444
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.72 E-value=1.6e-07 Score=49.32 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=46.3
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCCE--Ec------C-----------CCCceEEEE--eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFINGR--PL------P-----------ASSRATTTF--KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~~--~~------~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. +.+.+.|++... .. . ...++.... ......|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (280)
T 3fku_X 13 KPGSSVKVSCTSS--EVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSED 90 (280)
T ss_dssp CTTCCEEEEEEEC--CSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCSTT
T ss_pred CCCCcEEEEEEee--ccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhh
Confidence 5699999999986 54 567899987421 10 0 012444432 2334579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sG~Y~C~~~~~ 101 (280)
T 3fku_X 91 TAVYYCARSPS 101 (280)
T ss_dssp CEECCEEECSS
T ss_pred CEEEEEEEecC
Confidence 99999999886
No 445
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.71 E-value=2.2e-07 Score=48.40 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=46.8
Q ss_pred CCCceEEEEEEEccCCCCC--cEEEEeeCC--E---EcC----C----------CCceEEEE--eCCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPS--MRVDWFING--R---PLP----A----------SSRATTTF--KFGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~--~~~~w~~~~--~---~~~----~----------~~~~~~~~--~~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. +.+. +.+.|+++. . .+. . ..++.... ......|.|.++...|
T Consensus 151 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 228 (264)
T 2gjj_A 151 KTGASVKISCKAS--GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSED 228 (264)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEEe--CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCccc
Confidence 4689999999987 6653 789999863 1 110 0 22333332 2235579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.|.
T Consensus 229 sG~Y~C~a~n~ 239 (264)
T 2gjj_A 229 SADYYCVRSGN 239 (264)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEecC
Confidence 99999999985
No 446
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.71 E-value=1.5e-07 Score=46.76 Aligned_cols=61 Identities=8% Similarity=0.115 Sum_probs=43.3
Q ss_pred eEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 7 KIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 7 ~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+.|.|.+. +.|.+.+.|++++..+ .. ... .+.+.. ...|.|.|.|.+.|..+.......+
T Consensus 117 ~v~L~C~~~--~~p~~~~~W~~~g~~l-~~-------~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 117 NTTLTCEVM--NGTDPELNLYQDGKHL-KL-------SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp TTEEEEECS--SCSSCEEEEEESSCEE-EE-------ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred cEEEEeEcc--CCCCCEEEEEECCEEC-CC-------CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 578999887 8889999999998776 11 111 122222 4678899999999998877666544
No 447
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.71 E-value=1.1e-07 Score=43.63 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=44.3
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE-----Ec-C--C------CCceEEEE--eCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR-----PL-P--A------SSRATTTF--KFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~-----~~-~--~------~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|.+. +.+.+.+.|++... .+ . . ..++.... ......|.|.++...|.|.|.|.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 90 (112)
T 2z35_A 13 SEEDFLTIHCNYS--ASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCA 90 (112)
T ss_dssp ETTCCEEECCEEE--CSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEE
T ss_pred cCCCCEEEEEEEC--CCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEE
Confidence 4689999999987 55678899987431 11 0 0 12333321 12234599999999999999999
Q ss_pred EE
Q psy16902 67 VT 68 (90)
Q Consensus 67 ~~ 68 (90)
+.
T Consensus 91 ~~ 92 (112)
T 2z35_A 91 LS 92 (112)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 448
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.71 E-value=4.3e-08 Score=45.51 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=44.9
Q ss_pred CCCceEEEEEEEccCCCC----CcEEEEeeCC----EEcC-----CCCceEEEE-----eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP----SMRVDWFING----RPLP-----ASSRATTTF-----KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~----~~~~~w~~~~----~~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. ..+ ...+.|++.. ..+. ...++.... ......|.|.+++..|.|.|.
T Consensus 20 ~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 97 (120)
T 3noi_A 20 LEGSSAFLPCSFN--ASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYV 97 (120)
T ss_dssp ETTSCEEECCEEC--CCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEEEE
T ss_pred EcCCCEEEEeeec--CCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEEEE
Confidence 4699999999986 443 4679999864 3222 113333321 223346999999999999999
Q ss_pred EEEEc
Q psy16902 65 VRVTN 69 (90)
Q Consensus 65 C~~~~ 69 (90)
|.+..
T Consensus 98 C~v~~ 102 (120)
T 3noi_A 98 CRVEV 102 (120)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
No 449
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.71 E-value=1.5e-07 Score=43.56 Aligned_cols=67 Identities=12% Similarity=0.177 Sum_probs=44.3
Q ss_pred CCCceEEEEEEEccCCC-CCcEEEEeeCCE----EcCC-C----CceEEEE-----eCCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSMRVDWFINGR----PLPA-S----SRATTTF-----KFGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~----~~~~-~----~~~~~~~-----~~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|++++|.|.+. +. +.+.+.|+++.. .+.. . .++.... ......|.|.++...|.|.|.|.+
T Consensus 20 ~~G~~v~L~C~~~--~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 97 (120)
T 2yz1_A 20 AAGDSTVLNCTLT--SLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVK 97 (120)
T ss_dssp CTTCCEEECCEES--CCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEE
T ss_pred eCCCCEEEEeEEC--CCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEE
Confidence 4689999999986 44 567899998751 1100 0 1111110 122346999999999999999998
Q ss_pred EcCC
Q psy16902 68 TNNS 71 (90)
Q Consensus 68 ~~~~ 71 (90)
.+..
T Consensus 98 ~~~~ 101 (120)
T 2yz1_A 98 FQKG 101 (120)
T ss_dssp EECC
T ss_pred EcCC
Confidence 8753
No 450
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.71 E-value=5.2e-08 Score=49.24 Aligned_cols=78 Identities=14% Similarity=0.128 Sum_probs=50.1
Q ss_pred CCceE-EEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEe---CCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEE
Q psy16902 4 QKRKI-HFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFK---FGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTAL 79 (90)
Q Consensus 4 ~g~~~-~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 79 (90)
.|+.+ .|.|.+. .+.|.|.+.|++++.............. ...+.|.+......|.|.|.|.+.|..+.......
T Consensus 129 ~g~~~~~l~C~~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~ 207 (221)
T 3eow_R 129 TGEPVPMARCVST-GGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLT 207 (221)
T ss_dssp CSSSCCEEEEEEE-SCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEE
T ss_pred CCceEEEEEEECC-CccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEE
Confidence 46677 5999875 3788899999987432221111000001 12345888888999999999999998776555555
Q ss_pred EEE
Q psy16902 80 LSV 82 (90)
Q Consensus 80 l~v 82 (90)
+..
T Consensus 208 v~~ 210 (221)
T 3eow_R 208 VSL 210 (221)
T ss_dssp ECC
T ss_pred EEE
Confidence 443
No 451
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.70 E-value=6.1e-08 Score=48.64 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=47.8
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceEeEEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAESTALL 80 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~~l 80 (90)
.+....+.|... .+.|++.+.|++++.............+.. .+.|.+......|.|.|.|.+.|..+.......+
T Consensus 135 ~~~~~~~~c~~~-~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v 213 (225)
T 4fmk_A 135 PQSVAVARCVST-GGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPV 213 (225)
T ss_dssp SSCEEEEEEEEE-EEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEE
T ss_pred ceeeeeeeeeec-CCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEE
Confidence 355566666554 267888999998764322111100000111 2358899999999999999999987765554444
Q ss_pred EE
Q psy16902 81 SV 82 (90)
Q Consensus 81 ~v 82 (90)
.+
T Consensus 214 ~l 215 (225)
T 4fmk_A 214 TL 215 (225)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 452
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.70 E-value=1.2e-08 Score=52.28 Aligned_cols=68 Identities=7% Similarity=0.011 Sum_probs=46.1
Q ss_pred CCceEEEEEEEccCCC-CC-c-EEEEeeCCEEc-CCCCceEEE-EeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcc
Q psy16902 4 QKRKIHFEARIEPVGD-PS-M-RVDWFINGRPL-PASSRATTT-FKFG---FISLDLLSIVLHDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~-~~-~-~~~w~~~~~~~-~~~~~~~~~-~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~ 73 (90)
.|+++.|.|.+. +. |. | .+.|++++..+ ......... .+.. ...|.+......|.|.|.|.+.+..+.
T Consensus 27 ~G~~v~L~C~~~--g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 27 ISLDAKLRCLVV--NLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELP 102 (231)
T ss_dssp TSCCCEEEEEEE--EESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred cCCceEEEEEEe--CccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCC
Confidence 688999999987 63 53 4 99999988765 222211111 1111 234778888888999999999987654
No 453
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.70 E-value=8.5e-08 Score=43.93 Aligned_cols=67 Identities=15% Similarity=0.264 Sum_probs=46.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---E-c--C--C----------CCceEEEEeCCeEEEEEcCCCCCCCeE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---P-L--P--A----------SSRATTTFKFGFISLDLLSIVLHDSGE 62 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~-~--~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~ 62 (90)
.+|++++|.|.+. .+.+.+.+.|++.. . . + . . ..++..........|.|.++..+|.|.
T Consensus 12 ~~G~~v~L~C~~~-~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~ 90 (111)
T 2qhl_A 12 KRGENVTMECSMS-KVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTREDDGGE 90 (111)
T ss_dssp CTTCCEEECCBCT-TCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCGGGCEE
T ss_pred eCCCCEEEEEEcc-CCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCChhHCEE
Confidence 5699999999763 13345779998742 1 1 1 1 0 345554444445679999999999999
Q ss_pred EEEEEEcC
Q psy16902 63 YTVRVTNN 70 (90)
Q Consensus 63 y~C~~~~~ 70 (90)
|.|.+.+.
T Consensus 91 Y~C~~~~~ 98 (111)
T 2qhl_A 91 YFCGEVEG 98 (111)
T ss_dssp EEEEEEET
T ss_pred EEEEEccC
Confidence 99998875
No 454
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.70 E-value=5.5e-08 Score=50.29 Aligned_cols=66 Identities=9% Similarity=0.168 Sum_probs=44.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--EE---c---CCC---------C-ceEEEEeCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--RP---L---PAS---------S-RATTTFKFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~---~---~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~g~y~ 64 (90)
..|+++.|.|.+. +.+.+.+.|++.. .. + ... . ++......... |.|.++...|.|.|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~Y~ 90 (253)
T 3to4_D 14 PRGQAVNLRCILK--NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRTLY 90 (253)
T ss_dssp ESSCCEEEEEECS--CTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEEEE
T ss_pred eCCCcEEEEEEeC--CCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeEEE
Confidence 4699999999876 7788899998731 10 0 000 1 33332222222 889999999999999
Q ss_pred EEEEcCC
Q psy16902 65 VRVTNNS 71 (90)
Q Consensus 65 C~~~~~~ 71 (90)
|.+.+..
T Consensus 91 C~~~~~~ 97 (253)
T 3to4_D 91 CTSSADH 97 (253)
T ss_dssp EEEECSC
T ss_pred EEEecCC
Confidence 9998653
No 455
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.70 E-value=1.2e-06 Score=40.88 Aligned_cols=69 Identities=20% Similarity=0.304 Sum_probs=46.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCE------EcC--------CCCceEEEE--eCCeEEEEEcCCCCCCCeEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGR------PLP--------ASSRATTTF--KFGFISLDLLSIVLHDSGEYTVR 66 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~------~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y~C~ 66 (90)
.+|++++|.|.+.........+.|++... .+. ...|+.+.. ..+...|.|.+++.+|.|.|.|.
T Consensus 23 ~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~ 102 (122)
T 1hkf_A 23 VAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCR 102 (122)
T ss_dssp CTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEE
Confidence 56999999998751112235789987521 111 124555432 34456799999999999999999
Q ss_pred EEcCC
Q psy16902 67 VTNNS 71 (90)
Q Consensus 67 ~~~~~ 71 (90)
+....
T Consensus 103 v~~~~ 107 (122)
T 1hkf_A 103 IYRPS 107 (122)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 88753
No 456
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.70 E-value=2.2e-07 Score=47.50 Aligned_cols=66 Identities=12% Similarity=0.199 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec-C------------CCCceEEEEeC--CeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL-P------------ASSRATTTFKF--GFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~-~------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. +. +.+.+.|++.. . .+ . ...++....+. +...|.|.+++..|.
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (230)
T 1ypz_F 14 PRDETAQISCKVF--IESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDE 91 (230)
T ss_dssp ETTSCEEEEEEEC--CGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGC
T ss_pred eCCCcEEEEEEee--ccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhC
Confidence 4699999999986 53 56789998742 1 11 0 12344443322 455799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 92 G~Y~C~~~~~ 101 (230)
T 1ypz_F 92 AIYYCSYGEG 101 (230)
T ss_dssp SEEEEEECCT
T ss_pred EEEEEEEECC
Confidence 9999999874
No 457
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.70 E-value=1.4e-07 Score=47.67 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=47.3
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc------C----------CCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL------P----------ASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~------~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. ..+ . ...++....+ .+...|.|.++...|.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 90 (215)
T 1c5d_H 13 QPSQTLSLTCTVS--GFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDT 90 (215)
T ss_dssp CTTCCEEEEEEEC--SSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGC
T ss_pred cCCCcEEEEEEEC--CCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccC
Confidence 4699999999986 543 5789999752 110 0 1234444432 2345799999999999
Q ss_pred eEEEEEEEcCC
Q psy16902 61 GEYTVRVTNNS 71 (90)
Q Consensus 61 g~y~C~~~~~~ 71 (90)
|.|.|.+.+..
T Consensus 91 G~Y~C~~~~~~ 101 (215)
T 1c5d_H 91 AIYFCTREDGW 101 (215)
T ss_dssp EEEEEEECCSS
T ss_pred EEEEEEEecCC
Confidence 99999998863
No 458
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.69 E-value=1.7e-08 Score=50.78 Aligned_cols=55 Identities=13% Similarity=0.217 Sum_probs=41.5
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
..|+++.|.|. . |.+.+.|++++..+... ......|.+..+...|.|.|.|.+.+
T Consensus 16 ~~G~~v~L~C~----~-p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~ 70 (204)
T 1sy6_A 16 QEDGSVLLTCD----A-EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQ 70 (204)
T ss_dssp CSSSEEEEEEC----S-CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSS
T ss_pred cCCCeEEEEEc----C-CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecC
Confidence 56999999995 3 78899999999876421 01122478889999999999999644
No 459
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.69 E-value=3.1e-08 Score=49.00 Aligned_cols=60 Identities=5% Similarity=0.129 Sum_probs=41.4
Q ss_pred CceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 5 KRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 5 g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
+.++.|.|.+. .+ |.|.+.|++++..+.. .... .+.+.. ..|.|.|.|.+.|..+.....
T Consensus 115 ~~~v~L~C~~~-~g-p~p~i~W~~~~~~l~~-------~~~~--~l~~~~--~~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 115 CSNATLTCEVL-EG-TDVELKLYQGKEHLRS-------LRQK--TMSYQW--TNLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp GGGTEEEEECS-SC-TTCEEEEEETTEEEEE-------ESSS--EEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEEeC-CC-CCCEEEEEECCeECcC-------CCCC--EEEEEE--hhcCccEEEEEecCcCccccc
Confidence 34578999883 15 8999999999987641 1111 233322 678899999999988765544
No 460
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.69 E-value=2.8e-07 Score=48.00 Aligned_cols=66 Identities=12% Similarity=0.210 Sum_probs=46.2
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c----------------CCCCceEEEEe--CCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L----------------PASSRATTTFK--FGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~----------------~~~~~~~~~~~--~~~~~~~~~~~~~ 57 (90)
.+|+++.|.|.+. +.+ .+.+.|+++. .. + ....++....+ .....|.|.++..
T Consensus 164 ~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 241 (268)
T 1x9q_A 164 QPGGAMKLSCVTS--GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRV 241 (268)
T ss_dssp CTTCCEEEEEEEE--SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cCCCcEEEEEEec--CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCH
Confidence 4689999999987 665 3789998742 11 1 01234444332 2245699999999
Q ss_pred CCCeEEEEEEEcC
Q psy16902 58 HDSGEYTVRVTNN 70 (90)
Q Consensus 58 ~~~g~y~C~~~~~ 70 (90)
.|.|.|.|.+.+.
T Consensus 242 ~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 242 EDTGIYYCTGASY 254 (268)
T ss_dssp GGCEEEEEEEEET
T ss_pred HHCEEEEEEEccC
Confidence 9999999998874
No 461
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.69 E-value=4.1e-08 Score=50.73 Aligned_cols=65 Identities=6% Similarity=0.142 Sum_probs=45.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNS 71 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~ 71 (90)
.+|++++|.|... + +...+.|++++..+...... .........+.|..+...|.|.|.|.+.+..
T Consensus 19 ~~G~~VtL~C~~~--~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 19 PKEKQVTICCQGN--Y-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp ETTCCEEEEEECC--T-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCCcEEEEEeeC--C-CCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 4699999999864 3 45688999998764310000 0001223468999999999999999987754
No 462
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.68 E-value=3.2e-07 Score=47.48 Aligned_cols=66 Identities=12% Similarity=0.134 Sum_probs=45.0
Q ss_pred CCceEEEEEEEccCCCCCcEEEEeeCCE--E---cC------------CCCceEEEE-eCCeEEEEEcCCCCCCCeEEEE
Q psy16902 4 QKRKIHFEARIEPVGDPSMRVDWFINGR--P---LP------------ASSRATTTF-KFGFISLDLLSIVLHDSGEYTV 65 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~--~---~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C 65 (90)
+|++++|.|.+. +. .+.+.|++... . +. ...++.... ......|.|.++...|.|.|.|
T Consensus 151 ~G~~v~L~C~~~--~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 227 (256)
T 3tf7_C 151 TGENVTLSCRQT--NS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFC 227 (256)
T ss_dssp TTCCEEECEEEC--SC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEE
T ss_pred CCCcEEEEEEcC--CC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEE
Confidence 689999999986 55 78899997321 0 00 012222221 1233469999999999999999
Q ss_pred EEEcCCc
Q psy16902 66 RVTNNSG 72 (90)
Q Consensus 66 ~~~~~~~ 72 (90)
.+.|..|
T Consensus 228 ~a~n~~g 234 (256)
T 3tf7_C 228 ASSDAPG 234 (256)
T ss_dssp EEEEETT
T ss_pred EecCCCC
Confidence 9988654
No 463
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.68 E-value=1.2e-06 Score=40.76 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=45.5
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCCE-----Ec---C-----------CCCceEEEEeC--CeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFINGR-----PL---P-----------ASSRATTTFKF--GFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~~-----~~---~-----------~~~~~~~~~~~--~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. ....+.|++... .+ . ...++....+. ....|.|.++..+|
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (123)
T 2wzp_D 13 QAGGSLRLSCTAS--RRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPED 90 (123)
T ss_dssp ETTCCEEEEEEES--SCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEec--CCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCCHHH
Confidence 4699999999986 43 256799987531 00 0 02355544332 23569999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (123)
T 2wzp_D 91 TAIYYCAARSG 101 (123)
T ss_dssp CEEEEEEEEES
T ss_pred CEEEEEEEecC
Confidence 99999998765
No 464
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.68 E-value=4.4e-07 Score=41.83 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=46.0
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec---CC----------CCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL---PA----------SSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~---~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|++++|.|.+. +. ....+.|++.. . .+ .. ..++....+ .....|.|.++...|.
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 90 (116)
T 1a2y_B 13 APSQSLSITCTVS--GFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDT 90 (116)
T ss_dssp CTTSCEEEEEEEE--SSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred eCCCcEEEEEEEc--CCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHC
Confidence 5699999999986 43 24679998742 1 11 10 134444432 3456799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (116)
T 1a2y_B 91 ARYYCARERD 100 (116)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEEecC
Confidence 9999998875
No 465
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.67 E-value=5.7e-07 Score=46.03 Aligned_cols=65 Identities=17% Similarity=0.228 Sum_probs=46.4
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C----------CCCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P----------ASSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. . .+ . ...++....+ .+...|.|.++...|.
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 90 (232)
T 1dn0_B 13 KPSETLSLTCAVY--GGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 90 (232)
T ss_dssp CTTSCEEEEEEEE--SSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred eCCCcEEEEEEEc--cccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccC
Confidence 4699999999987 554 5789999742 1 11 0 1245555432 2355799999999999
Q ss_pred eEEEEEEEc
Q psy16902 61 GEYTVRVTN 69 (90)
Q Consensus 61 g~y~C~~~~ 69 (90)
|.|.|.+.+
T Consensus 91 G~Y~C~~~~ 99 (232)
T 1dn0_B 91 AVYYCARPP 99 (232)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999983
No 466
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.67 E-value=6e-09 Score=52.60 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=45.0
Q ss_pred CCCCceEEEEEEEccCCCCC-----cEEEEeeCCEEc-------------CCCCceEEEE---eCCeEEEEEcCCCCCCC
Q psy16902 2 DPQKRKIHFEARIEPVGDPS-----MRVDWFINGRPL-------------PASSRATTTF---KFGFISLDLLSIVLHDS 60 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~~~-----~~~~w~~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 60 (90)
...|+++.|.|.+. +.+. +.+.|++++... ....+..+.. ..+...|.|.++...|.
T Consensus 7 ~~~G~~v~L~C~~~--~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 7 ALVDTDATLRCSFS--PEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCTTSCEEECCBCC--CCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EECCCCeEEEEEec--CCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 35799999999876 5543 789999876321 0112222211 00133589999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 85 G~Y~C~~~~~ 94 (222)
T 4i0k_A 85 GSYTCFVSIQ 94 (222)
T ss_dssp SCEEEEEEEC
T ss_pred EEEEEEEEeC
Confidence 9999999875
No 467
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.67 E-value=3.1e-08 Score=48.67 Aligned_cols=57 Identities=5% Similarity=0.119 Sum_probs=40.6
Q ss_pred EEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeEE
Q psy16902 9 HFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAESTA 78 (90)
Q Consensus 9 ~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~~ 78 (90)
.|.|.+. +.|.|.+.|++++..+....... +.+. ...+.|.|.|.+.|..+......
T Consensus 109 ~L~C~~~--~~p~p~i~W~~~~~~l~~~~~~~---------l~~~--~~~~~g~Y~C~a~N~~~~~~~~~ 165 (171)
T 1ccz_A 109 TLTCEVL--EGTDVELKLYQGKEHLRSLRQKT---------MSYQ--WTNLRAPFKCKAVNRVSQESEME 165 (171)
T ss_dssp EEEEECS--SCSSCEEEEEETTEEEEEESSSE---------EEEE--CSCCSSCEEEEEEETTEEEEEEE
T ss_pred EEEEEeC--CCCCcEEEEEECCEECcCCcceE---------EEEe--ccCCCceEEEEEEcccCccccee
Confidence 6899886 78899999999998764322111 2222 35678899999999987765544
No 468
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.67 E-value=2.5e-07 Score=46.94 Aligned_cols=71 Identities=15% Similarity=0.171 Sum_probs=46.2
Q ss_pred CCCceEEEEEEEccCCC-CC--cEEEEeeCCEEcCC-CCceEEEEeCC---eEEEEEcCCCCCCCeEEEEEEEcCCcceE
Q psy16902 3 PQKRKIHFEARIEPVGD-PS--MRVDWFINGRPLPA-SSRATTTFKFG---FISLDLLSIVLHDSGEYTVRVTNNSGSAE 75 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~--~~~~w~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~~~~ 75 (90)
..|+.+.|.|.+. +. |. +.+.|++++..+.. ........+.. .+.+.+......|.|.|.|.+.+..+...
T Consensus 135 ~~g~~v~L~C~~~--g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 135 LSSDPVIIGCLIH--DYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCSSEEEEEEEE--EEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCcEEEEEEEE--eEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 3588899999987 65 65 78999998864310 00000001111 12477777777789999999999877544
No 469
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.67 E-value=9.6e-07 Score=40.90 Aligned_cols=66 Identities=8% Similarity=0.130 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCCE-----Ec---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFINGR-----PL---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~~-----~~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.. ...+.|++... .+ . ...|+....+ .....|.|.++...|
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 1n4x_H 13 KPGETVKISCKAT--NYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNED 90 (120)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEec--CcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 5699999999986 432 46799987431 11 0 1235555432 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sG~Y~C~~~~~ 101 (120)
T 1n4x_H 91 TATYFCVRDRH 101 (120)
T ss_dssp CEEEEEEEESS
T ss_pred CEEEEEEEEcc
Confidence 99999998875
No 470
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.67 E-value=8e-07 Score=49.72 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=47.5
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---c---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---L---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+ .+.+.|++.. .. + . ...++....+ .....|.|.++...|
T Consensus 14 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 91 (475)
T 1iga_A 14 KPGASVKVSCKAS--GYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPED 91 (475)
T ss_pred eCCCCEEEEEEec--CCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhh
Confidence 5699999999986 543 5789999852 11 1 0 1234444332 234579999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 92 ~G~Y~C~~~~~~~ 104 (475)
T 1iga_A 92 TAVYYCARDPYGG 104 (475)
T ss_pred CEEEEEEEeccCC
Confidence 9999999998754
No 471
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.66 E-value=3.6e-07 Score=41.44 Aligned_cols=63 Identities=10% Similarity=-0.032 Sum_probs=43.4
Q ss_pred CCCceEEEEEEEccCCCCC----cEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 3 PQKRKIHFEARIEPVGDPS----MRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
..|++++|.| .. ... ..+.|++++..... ...........+.|..+...|.|.|.|...+..+
T Consensus 21 ~~G~~VTL~C-~~---~~~~~~~~~f~l~k~g~~~~~---~~~~~~~~~a~f~i~~vt~~~aG~Y~C~~~~~~~ 87 (102)
T 4esk_A 21 SQGTFVTVVC-SY---SDKHDLYNMVRLEKDGSTFME---KSTEPYKTEDEFEIGPVNETITGHYSCIYSKGIT 87 (102)
T ss_dssp ETTCCEEEEE-EC---TTTGGGCCEEEEEETTEEEEE---EECCSSCSEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred cCCCcEEEEE-CC---CcCCCcccEEEEEECCccccc---cccCCCCcceEEEeCcCCcccCeeEEEEEeCCCc
Confidence 4689999999 64 333 57888888864321 0000123345689999999999999999887654
No 472
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.66 E-value=2.6e-08 Score=50.79 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=47.8
Q ss_pred CCceEEEEEEEccCCC-CCc-EEEEeeCCEEcCC--CCceEEEEeC---CeEEEEEcCCCCCCCeEEEEEEEcCCcceEe
Q psy16902 4 QKRKIHFEARIEPVGD-PSM-RVDWFINGRPLPA--SSRATTTFKF---GFISLDLLSIVLHDSGEYTVRVTNNSGSAES 76 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~ 76 (90)
.|+.+.|.|.+. +. |.+ .+.|++++..+.. ..... ... ....|.+......+ |.|.|.+.|..+....
T Consensus 135 ~g~~v~L~C~~~--g~~P~p~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 209 (227)
T 1mju_H 135 SGSSVTLGCLVK--GYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKV 209 (227)
T ss_dssp ---CEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEE
T ss_pred CCCcEEEEEEee--cEeCCCeEEEEecCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcce
Confidence 588999999987 64 666 8999998865321 11110 001 12347777777767 9999999997665555
Q ss_pred EEEEEEecCC
Q psy16902 77 TALLSVQGRR 86 (90)
Q Consensus 77 ~~~l~v~~~~ 86 (90)
...+.+.++|
T Consensus 210 ~~~~~~~~~p 219 (227)
T 1mju_H 210 DKKIEPRGPT 219 (227)
T ss_dssp EEECCCCCC-
T ss_pred EEEeCCCCCC
Confidence 5555444443
No 473
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.66 E-value=2.6e-07 Score=46.78 Aligned_cols=63 Identities=17% Similarity=0.242 Sum_probs=44.8
Q ss_pred CCceEEEEEEEccCC-CCC--cEEEEeeCCEEcC----------CCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcC
Q psy16902 4 QKRKIHFEARIEPVG-DPS--MRVDWFINGRPLP----------ASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNN 70 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~-~~~--~~~~w~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~ 70 (90)
.|+.+.|.|.+. + .|. +.+.|++++..+. ....+.. ...+.+......|.|.|.|.+.+.
T Consensus 137 ~g~~v~L~C~~~--~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~ 209 (221)
T 3m8o_H 137 PDGNVVIACLVQ--GFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHY 209 (221)
T ss_dssp CTTEEEEEEEEE--EEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEET
T ss_pred cCCCEEEEEEEE--eeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEEC
Confidence 688999999987 6 554 4899999886542 1111111 124778888888999999999987
Q ss_pred Ccc
Q psy16902 71 SGS 73 (90)
Q Consensus 71 ~~~ 73 (90)
.+.
T Consensus 210 ~~~ 212 (221)
T 3m8o_H 210 TNP 212 (221)
T ss_dssp TSC
T ss_pred CCC
Confidence 654
No 474
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.65 E-value=4.8e-07 Score=41.93 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.. ...+.|++.. . .+ . ...++....+ .....|.|.++...|
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 3b9v_A 13 QPGGSLRLSCAAS--GFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAED 90 (120)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eCCccEEEEEEee--CccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCCHHH
Confidence 5699999999986 432 5679998742 1 11 0 1235555432 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (120)
T 3b9v_A 91 TAVYYCARWGG 101 (120)
T ss_dssp CEEEEEEEECT
T ss_pred CEEEEEEEEcC
Confidence 99999998864
No 475
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.65 E-value=2.9e-08 Score=50.22 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=46.7
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEeeCCEEcC--CCCceEEE-EeCCeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFINGRPLP--ASSRATTT-FKFGFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
.+|+.+.|.|.+. +. |.| .+.|++++.... ........ .......+.+......+ |.|.|.+.|..+...+.
T Consensus 138 ~~g~~v~L~C~~~--g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 138 TSGSSVTLGCLVK--GYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp SCSSSEEEEEEEE--EEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCCCcEEEEEEEE--EEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 4688999999987 76 888 999999875310 00000000 00012346777776655 99999999988865544
Q ss_pred E
Q psy16902 78 A 78 (90)
Q Consensus 78 ~ 78 (90)
.
T Consensus 215 ~ 215 (220)
T 1pz5_B 215 K 215 (220)
T ss_dssp E
T ss_pred e
Confidence 3
No 476
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.65 E-value=2.9e-07 Score=42.86 Aligned_cols=75 Identities=12% Similarity=-0.021 Sum_probs=46.0
Q ss_pred CCCceEEEEEEEccCCCCC----cEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEcCCcce--Ee
Q psy16902 3 PQKRKIHFEARIEPVGDPS----MRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTNNSGSA--ES 76 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~~~~~~--~~ 76 (90)
..|++++|.| .. ... ..+.|++++..... ...........+.|..++..|.|.|.|...+..+.. ..
T Consensus 21 ~~G~~VTL~C-~~---~~~~~~~~~f~L~k~g~~~~~---~~~~~~~~~a~f~i~~vt~~daG~Y~C~y~~~~~wS~~Sd 93 (118)
T 4ety_A 21 SQGTFVTVVC-SY---SDKHDLYNMVRLEKDGSTFME---KSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSK 93 (118)
T ss_dssp ETTCCEEEEE-EC---TTTGGGCCEEEEEETTEEEEE---EECCSSSSEEEEEECSCCGGGCEEEEEEEEC----CEECC
T ss_pred cCCCcEEEEE-CC---CCCCcccCEEEEEECCcCccc---cccCCCCcceEEEeCccCccCCeEEEEEeeCCCccccccC
Confidence 4689999999 63 333 46888898865321 000012234568999999999999999987754422 22
Q ss_pred EEEEEEec
Q psy16902 77 TALLSVQG 84 (90)
Q Consensus 77 ~~~l~v~~ 84 (90)
...|.|.+
T Consensus 94 pl~L~Vtg 101 (118)
T 4ety_A 94 TLELKVIK 101 (118)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEE
Confidence 23455544
No 477
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.65 E-value=4.8e-07 Score=45.64 Aligned_cols=65 Identities=18% Similarity=0.298 Sum_probs=46.4
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---EcC-------CCCceEEEEe---CCeEEEEEcCCCCCCCeEEEEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PLP-------ASSRATTTFK---FGFISLDLLSIVLHDSGEYTVRV 67 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~g~y~C~~ 67 (90)
.+|+++.|.|.+. +.+ +.+.|++.. . .+. ...|+....+ .+...|.|.+++..|.|.|.|.+
T Consensus 14 ~~G~~v~L~C~~~--~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (207)
T 1ypz_E 14 HEGTDSALRCNFT--TTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAA 90 (207)
T ss_dssp ETTCCEEEEEEES--SCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEE
T ss_pred ccCCcEEEEEEEe--CCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 4689999999986 443 579999743 1 110 1245544433 34567999999999999999999
Q ss_pred EcC
Q psy16902 68 TNN 70 (90)
Q Consensus 68 ~~~ 70 (90)
.+.
T Consensus 91 ~~~ 93 (207)
T 1ypz_E 91 DTW 93 (207)
T ss_dssp ECB
T ss_pred ecC
Confidence 875
No 478
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.65 E-value=6.2e-07 Score=45.88 Aligned_cols=77 Identities=13% Similarity=0.115 Sum_probs=47.9
Q ss_pred CC-ceEEEEEEEccCCC-CCc-EEEEee-CCEEcCCCCce-EEEEeCC---eEEEEEcCCCC--CCCeEEEEEEEcCCcc
Q psy16902 4 QK-RKIHFEARIEPVGD-PSM-RVDWFI-NGRPLPASSRA-TTTFKFG---FISLDLLSIVL--HDSGEYTVRVTNNSGS 73 (90)
Q Consensus 4 ~g-~~~~l~C~~~~~~~-~~~-~~~w~~-~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~--~~~g~y~C~~~~~~~~ 73 (90)
.| +.+.|.|.+. +. |.| .+.|++ ++..+...... ....... ...+.+..... .|.|.|.|.+.+..+.
T Consensus 139 ~g~~~v~L~C~~~--g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 139 SDTSSVAVGCLAQ--DFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp --CCSEEEEEEEE--EEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCC
T ss_pred CCCCcEEEEEEEE--EEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCC
Confidence 46 8899999987 65 666 899999 88765430000 0000111 23467776665 6789999999999877
Q ss_pred eEeEEEEEE
Q psy16902 74 AESTALLSV 82 (90)
Q Consensus 74 ~~~~~~l~v 82 (90)
......+.+
T Consensus 217 ~~~~~~i~~ 225 (232)
T 1dn0_B 217 KEKNVPLPV 225 (232)
T ss_dssp EEEEEECCC
T ss_pred cceeEecCC
Confidence 655554443
No 479
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.65 E-value=8.3e-07 Score=41.30 Aligned_cols=66 Identities=14% Similarity=0.222 Sum_probs=45.6
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---E-c---C----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---P-L---P----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~-~---~----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. ....+.|++.. . . + . ...++....+ .....|.|.++..+|
T Consensus 15 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 92 (123)
T 2p45_B 15 QAGGSLRLSCAAS--GYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLKPED 92 (123)
T ss_dssp ETTCCEEEEEEEE--SCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCCGGG
T ss_pred eCCCCEEEEEEec--CccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 4699999999986 43 35779998742 1 1 1 0 0134544432 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 93 sg~Y~C~~~~~ 103 (123)
T 2p45_B 93 TATYYCAAGGY 103 (123)
T ss_dssp CEEEEEEESSC
T ss_pred CEEEEEEEEec
Confidence 99999998763
No 480
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.64 E-value=7.1e-07 Score=49.42 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=48.4
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EEc----C-------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RPL----P-------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~~----~-------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..|+++.|.|.+. +.+ .+.+.|+++. ..+ . ...++....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (444)
T 1igt_B 13 QPGGSLKLSCATS--GFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSED 90 (444)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEcC--CCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHH
Confidence 5699999999987 654 5789998752 211 0 1235554432 234579999999999
Q ss_pred CeEEEEEEEcCCc
Q psy16902 60 SGEYTVRVTNNSG 72 (90)
Q Consensus 60 ~g~y~C~~~~~~~ 72 (90)
.|.|.|.+.+..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (444)
T 1igt_B 91 TAMYYCARHGGYY 103 (444)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEEecCCc
Confidence 9999999998754
No 481
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.64 E-value=1.1e-06 Score=40.83 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.+ ...+.|++.. . .+ . ...++....+ .....|.|.++..+|
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (121)
T 1j05_H 13 EPGASVKLSCTAS--GFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSED 90 (121)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eCCCcEEEEEEec--CcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCCHHH
Confidence 5699999999986 433 4679998742 1 01 0 0134444432 334579999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (121)
T 1j05_H 91 TAVYYCAPFGY 101 (121)
T ss_dssp CEEEEEEEEBT
T ss_pred CEEEEEEEEcC
Confidence 99999998875
No 482
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.63 E-value=1.1e-06 Score=40.79 Aligned_cols=66 Identities=14% Similarity=0.243 Sum_probs=45.9
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec---CC----------CCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL---PA----------SSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~---~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|++++|.|.+. +. ....+.|++.. . .+ .. ..|+....+ .....|.|.++...|.
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Ds 90 (121)
T 1kxv_C 13 PAGGSLRLSCAAS--GNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDDT 90 (121)
T ss_dssp CTTCCEEEEEEEE--SCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGGC
T ss_pred cCCCcEEEEEEec--CCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHC
Confidence 5699999999986 43 25679998742 1 11 11 134444432 3456799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (121)
T 1kxv_C 91 AMYYCKPSLR 100 (121)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEEEEec
Confidence 9999998764
No 483
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.62 E-value=5.7e-07 Score=41.47 Aligned_cols=66 Identities=14% Similarity=0.136 Sum_probs=45.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.. ...+.|++.. . .+ . ...++....+ .+...|.|.++...|
T Consensus 13 ~~G~~vtL~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (117)
T 2yc1_A 13 QPGGSLRLSCTGS--GFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLRAED 90 (117)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEec--CcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 5699999999986 432 4679998742 1 01 1 0235554432 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (117)
T 2yc1_A 91 TAVYYCARGGV 101 (117)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEeC
Confidence 99999998764
No 484
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.62 E-value=2e-07 Score=49.24 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=47.0
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--EE---cC--------------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--RP---LP--------------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~~---~~--------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.+ .+.+.|+++. .. +. ...++..... .....|.|.++...|
T Consensus 35 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 112 (291)
T 2gki_A 35 KPGASVKMSCKAS--GYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSED 112 (291)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEecc--CCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHH
Confidence 5699999999987 665 5789999853 11 00 0133333321 234579999999999
Q ss_pred CeEEEEEEEcCC
Q psy16902 60 SGEYTVRVTNNS 71 (90)
Q Consensus 60 ~g~y~C~~~~~~ 71 (90)
.|.|.|.+.+..
T Consensus 113 sG~Y~C~~~~~~ 124 (291)
T 2gki_A 113 SAVYYCARGAYK 124 (291)
T ss_dssp CEEEEEEEECGG
T ss_pred CEEEEEEEeccc
Confidence 999999999863
No 485
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.61 E-value=7.6e-07 Score=46.08 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=45.9
Q ss_pred CCCceEEEEEEEccCC--CCCcEEEEeeCCE-----Ec--------------CCCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVG--DPSMRVDWFINGR-----PL--------------PASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~--~~~~~~~w~~~~~-----~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|+++.|.|.+. + .+.+.+.|++... .+ ....|+....+ .+...|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (253)
T 3liz_H 13 QPGGSLKLSCAAS--GFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSED 90 (253)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGG
T ss_pred CCCCcEEEEEEee--CccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhh
Confidence 5699999999986 4 3356789987421 11 01134444432 245569999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sG~Y~C~~~~~ 101 (253)
T 3liz_H 91 TAMYYCTRDPA 101 (253)
T ss_dssp CEEEEEEECCB
T ss_pred CEEEEEEEecC
Confidence 99999999875
No 486
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.61 E-value=2.3e-06 Score=40.03 Aligned_cols=66 Identities=9% Similarity=0.045 Sum_probs=45.7
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E---Ec-C-----------CCCceEEEE-eCCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R---PL-P-----------ASSRATTTF-KFGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~---~~-~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|++++|.|.+. ......+.|++.. . .+ . ...++.... ......|.|.++..+|.|.|.
T Consensus 18 ~~G~~vtL~C~~~--~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~~~~Dsg~Y~ 95 (125)
T 3r8b_B 18 VTGEKVTLSCKQT--NSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 95 (125)
T ss_dssp ETTCCEEEEEEEE--SCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTCCGGGCEEEE
T ss_pred cCCCcEEEEEEEC--CCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCCChhhCEEEE
Confidence 4699999999986 5545589998742 1 11 0 113444332 245667999999999999999
Q ss_pred EEEEcC
Q psy16902 65 VRVTNN 70 (90)
Q Consensus 65 C~~~~~ 70 (90)
|.+...
T Consensus 96 C~~~~~ 101 (125)
T 3r8b_B 96 CASGGG 101 (125)
T ss_dssp EEEEET
T ss_pred EEEcCC
Confidence 998753
No 487
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.61 E-value=1.4e-06 Score=40.53 Aligned_cols=64 Identities=14% Similarity=0.258 Sum_probs=44.7
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec----C----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL----P----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~----~----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. ....+.|++.. . .+ . ...++....+ .+...|.|.++..+|
T Consensus 15 ~~G~~vtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 92 (121)
T 2xt1_B 15 QAGGSLRLSCAAS--GSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPED 92 (121)
T ss_dssp ETTCCEEEEEEEE--SSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eCCCCEEEEEEec--CeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCCCHHH
Confidence 4699999999986 43 35679998742 1 11 0 1235554432 245679999999999
Q ss_pred CeEEEEEEE
Q psy16902 60 SGEYTVRVT 68 (90)
Q Consensus 60 ~g~y~C~~~ 68 (90)
.|.|.|.+.
T Consensus 93 sG~Y~C~~~ 101 (121)
T 2xt1_B 93 TAMYYCKAS 101 (121)
T ss_dssp CEEEEEEET
T ss_pred CEEEEEEEE
Confidence 999999886
No 488
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.60 E-value=1.1e-06 Score=40.67 Aligned_cols=66 Identities=12% Similarity=0.158 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---C-----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---P-----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +.. ...+.|++.. . .+ . ...++....+ .....|.|.++...|
T Consensus 13 ~~G~~v~L~C~~~--~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (120)
T 1mfa_H 13 RPGASVKMSCKAS--GYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLTSED 90 (120)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eCCCCEEEEEEee--CccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 5699999999986 432 4679998631 1 11 0 1235555433 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (120)
T 1mfa_H 91 SAVYYCTRGGH 101 (120)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEecC
Confidence 99999998765
No 489
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.60 E-value=1.2e-07 Score=48.29 Aligned_cols=73 Identities=11% Similarity=0.076 Sum_probs=46.4
Q ss_pred CCCceEEEEEEEccCCC-CCc-EEEEeeCCEEcCCCCceEEEEeC---CeEEEEEcCCCCCCCeEEEEEEEcCCcceEeE
Q psy16902 3 PQKRKIHFEARIEPVGD-PSM-RVDWFINGRPLPASSRATTTFKF---GFISLDLLSIVLHDSGEYTVRVTNNSGSAEST 77 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~~~~ 77 (90)
..|+.+.|.|.+. +. |.| .+.|++++..+............ ....+.+......+ |.|.|.+.|..+.....
T Consensus 143 ~~g~~~~l~C~~~--g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 143 TTGSSVTLGCLVK--GYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp -CCSEEEEEEEEE--EEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCCEEEEEEEc--cEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 3688999999987 65 767 89999987643211100011111 12347777776655 99999999987765544
Q ss_pred E
Q psy16902 78 A 78 (90)
Q Consensus 78 ~ 78 (90)
.
T Consensus 220 ~ 220 (228)
T 3bae_H 220 K 220 (228)
T ss_dssp E
T ss_pred E
Confidence 3
No 490
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.60 E-value=1.1e-07 Score=47.76 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=43.6
Q ss_pred CCceEEEEEEEccCCCCC--cEEEEeeCCEEcCCCC-ce-EEEE--eCC---eEEEEEcCCCCCCCeEEEEEEEcCCc
Q psy16902 4 QKRKIHFEARIEPVGDPS--MRVDWFINGRPLPASS-RA-TTTF--KFG---FISLDLLSIVLHDSGEYTVRVTNNSG 72 (90)
Q Consensus 4 ~g~~~~l~C~~~~~~~~~--~~~~w~~~~~~~~~~~-~~-~~~~--~~~---~~~~~~~~~~~~~~g~y~C~~~~~~~ 72 (90)
.|+.+.|.|.+. +.++ +.+.|++++..+.... .. .... ... ...+.+......|.|.|.|.+.|...
T Consensus 126 ~~~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 126 GTGSATLVCFVN--NFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp TTTEEEEEEEEE--EEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CCCCcEEEEEEe--eecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 466799999987 6543 4899999998775421 00 0000 011 12356666666789999999999753
No 491
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.59 E-value=1.1e-06 Score=45.14 Aligned_cols=66 Identities=11% Similarity=0.221 Sum_probs=46.8
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC-----EEc-C--------CCCceEEEEe--CCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING-----RPL-P--------ASSRATTTFK--FGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~-----~~~-~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. +.+ .+.+.|++.. ..+ . ...++....+ .+...|.|.+++..|.|.|.
T Consensus 14 ~~G~~vtL~C~~s--~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~ 91 (229)
T 1hxm_A 14 SIGVPATLRCSMK--GEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYY 91 (229)
T ss_dssp ETTCCEEEEEEEC--SSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEE
T ss_pred cCCCCEEEEeEec--CCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEE
Confidence 4689999999986 443 4679998742 111 0 1245555432 34567999999999999999
Q ss_pred EEEEcC
Q psy16902 65 VRVTNN 70 (90)
Q Consensus 65 C~~~~~ 70 (90)
|.+.+.
T Consensus 92 C~~~~~ 97 (229)
T 1hxm_A 92 CACDTL 97 (229)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999875
No 492
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.59 E-value=1.7e-07 Score=52.40 Aligned_cols=74 Identities=9% Similarity=0.007 Sum_probs=47.1
Q ss_pred CCCceEEEEEEEccCCCCC---cEEEEeeCCEEcCCCCc-eEEEE-eC---CeEEEEEcCCCCCCCeEEEEEEEcCCcce
Q psy16902 3 PQKRKIHFEARIEPVGDPS---MRVDWFINGRPLPASSR-ATTTF-KF---GFISLDLLSIVLHDSGEYTVRVTNNSGSA 74 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~---~~~~w~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~~~~~~g~y~C~~~~~~~~~ 74 (90)
..|+.+.|.|.+. +.++ +.+.| ++..+..... ..... .. ....|.|..+...|.|.|.|.+.|..+..
T Consensus 260 ~~G~~v~L~C~~~--g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 260 LLGSEANLTCTLT--GLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT 335 (475)
T ss_pred ccCCceEEEEEEE--cccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC
Confidence 4689999999987 6544 68999 4333321110 00000 01 12358889999999999999999987765
Q ss_pred EeEEEE
Q psy16902 75 ESTALL 80 (90)
Q Consensus 75 ~~~~~l 80 (90)
.....+
T Consensus 336 ~~~~~v 341 (475)
T 1iga_A 336 PLTATL 341 (475)
T ss_pred ceEEEe
Confidence 433333
No 493
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.59 E-value=8.4e-07 Score=45.87 Aligned_cols=65 Identities=6% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCC--E--E-c------------CCCCceEEEEe-CCeEEEEEcCCCCCCCeEEE
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFING--R--P-L------------PASSRATTTFK-FGFISLDLLSIVLHDSGEYT 64 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~--~-~------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~y~ 64 (90)
.+|+++.|.|.+. .+.+.+.|++.. . . + ....++..... .....|.|.++...|.|.|.
T Consensus 16 ~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 92 (252)
T 1oga_E 16 KEGQNVTLSCEQN---LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYL 92 (252)
T ss_dssp ETTCCEEECCEEC---SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEE
T ss_pred cCCCcEEEEEEeC---CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEE
Confidence 4689999999974 457899999752 1 1 1 01234443321 22346999999999999999
Q ss_pred EEEEcC
Q psy16902 65 VRVTNN 70 (90)
Q Consensus 65 C~~~~~ 70 (90)
|.+.+.
T Consensus 93 C~~~~~ 98 (252)
T 1oga_E 93 CASSSR 98 (252)
T ss_dssp EEEESS
T ss_pred EEEecC
Confidence 999885
No 494
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=98.59 E-value=3.6e-07 Score=41.96 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=44.0
Q ss_pred CCCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec---C----------CCCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 2 DPQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL---P----------ASSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 2 ~~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~---~----------~~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
..+|++++|.|.+. +. ....+.|++.. . .+ . ...++....+ .+...|.|.++...|
T Consensus 12 ~~~G~~vtL~C~~~--~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 89 (114)
T 1sjv_A 12 VQAGESLKLSCAAS--GNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEPED 89 (114)
T ss_dssp CCTTCCEEEEECCC--C-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEEc--CccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCCHHH
Confidence 35799999999875 33 24679998742 1 11 1 1234544432 334579999999999
Q ss_pred CeEEEEEEEc
Q psy16902 60 SGEYTVRVTN 69 (90)
Q Consensus 60 ~g~y~C~~~~ 69 (90)
.|.|.|.+.+
T Consensus 90 sG~Y~C~~~~ 99 (114)
T 1sjv_A 90 TAVYYCYTHY 99 (114)
T ss_dssp CSEEEEEECC
T ss_pred CEEEEEeEEc
Confidence 9999999876
No 495
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.58 E-value=1.2e-06 Score=40.94 Aligned_cols=66 Identities=14% Similarity=0.295 Sum_probs=45.9
Q ss_pred CCCceEEEEEEEccCCCC--CcEEEEeeCC--E---Ec---CC----------CCceEEEEe--CCeEEEEEcCCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDP--SMRVDWFING--R---PL---PA----------SSRATTTFK--FGFISLDLLSIVLHDS 60 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~--~~~~~w~~~~--~---~~---~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~ 60 (90)
.+|++++|.|.+. +.+ ...+.|++.. . .+ .. ..|+....+ .....|.|.++..+|.
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds 90 (124)
T 1yc7_A 13 QAGGSLRLSCAVS--GSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDT 90 (124)
T ss_dssp CTTCCEEEEEEEE--SCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCEEEEEEEe--CCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCHHHC
Confidence 5699999999986 432 5679998742 1 11 11 135555433 2456799999999999
Q ss_pred eEEEEEEEcC
Q psy16902 61 GEYTVRVTNN 70 (90)
Q Consensus 61 g~y~C~~~~~ 70 (90)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (124)
T 1yc7_A 91 GMYYCQIQCG 100 (124)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEeC
Confidence 9999998764
No 496
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.58 E-value=8.1e-07 Score=41.82 Aligned_cols=65 Identities=15% Similarity=0.204 Sum_probs=45.1
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeC--CEE------c---CC-------------CCceEE-EEeCCeEEEEEcCCCC
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFIN--GRP------L---PA-------------SSRATT-TFKFGFISLDLLSIVL 57 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~------~---~~-------------~~~~~~-~~~~~~~~~~~~~~~~ 57 (90)
.+|++++|.|.+. +.....+.|++. +.. + .. ..++.. ........|.|..+..
T Consensus 17 ~~G~~vtL~C~~s--~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~~L~I~~~~~ 94 (128)
T 1nez_G 17 ELGQKVDLVCEVL--GSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNKFSK 94 (128)
T ss_dssp CTTCCEEEEEEEE--SCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETTTEEEEEESSCCG
T ss_pred cCCCCEEEEEEeC--ccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCCCEEEEEECCCCH
Confidence 5799999999986 554467999863 211 1 01 134444 3334456799999999
Q ss_pred CCCeEEEEEEEc
Q psy16902 58 HDSGEYTVRVTN 69 (90)
Q Consensus 58 ~~~g~y~C~~~~ 69 (90)
+|.|.|.|.+..
T Consensus 95 ~Dsg~YyCa~~~ 106 (128)
T 1nez_G 95 ENEGYYFCSVIS 106 (128)
T ss_dssp GGCEEEEEEEEE
T ss_pred HHCEEEEEEEcC
Confidence 999999998764
No 497
>3i84_A Cervical EMMPRIN; CD147, dimerization, cell adhesion, beta-strand swapping; 2.00A {Homo sapiens} PDB: 3i85_A
Probab=98.58 E-value=6.1e-07 Score=40.37 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=38.8
Q ss_pred CCCceEEEEEEEccCCCCCcEEEEeeCCEEcCCCCceEEEEeCCeEEEEEcCCCCCCCeEEEEEEEc
Q psy16902 3 PQKRKIHFEARIEPVGDPSMRVDWFINGRPLPASSRATTTFKFGFISLDLLSIVLHDSGEYTVRVTN 69 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~~~~ 69 (90)
..|.++.|.|.......+.....|++++..+..... ......+.+. ...|+|.|.|+...
T Consensus 20 ~~gs~v~LtC~l~~s~~~~~~~~W~kng~~L~~~~~-----~~~~t~y~Id--~~~dSGeY~Cvf~~ 79 (98)
T 3i84_A 20 DLGSKILLTCSLDDSATEVTGHRWLKGGVVLKEDAL-----PGQKTEFKVD--SDDQWGEYSCVFLP 79 (98)
T ss_dssp EETTEEEEEEEECCC-CCEEEEEEEETTEEEEEECC-----CCSEEEEEEC--GGGCCEEEEEEEEE
T ss_pred eCCCeEEEEEcCCCCCCCccCCEEeECCEECccccC-----CCCccEEEEe--ccccCEeEEEEECC
Confidence 457889999988621134455789999998754311 1112234554 66789999999654
No 498
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.57 E-value=2.3e-07 Score=47.62 Aligned_cols=66 Identities=11% Similarity=0.155 Sum_probs=43.6
Q ss_pred CceEEEEEEEccCCCCCc--EEEEeeCCEEcCCCCceEEEE--------eCC---eEEEEEcCCCCCC-CeEEEEEEEcC
Q psy16902 5 KRKIHFEARIEPVGDPSM--RVDWFINGRPLPASSRATTTF--------KFG---FISLDLLSIVLHD-SGEYTVRVTNN 70 (90)
Q Consensus 5 g~~~~l~C~~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~-~g~y~C~~~~~ 70 (90)
|+.+.|.|.+. +.+++ .+.|++++..+.......... +.. ...+.+......| .|.|.|.+.+.
T Consensus 140 g~~v~L~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 217 (246)
T 4dzb_B 140 TQKATLVCLAT--GFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 217 (246)
T ss_dssp HSEEEEEEEEE--EEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred CCcEEEEEEEc--cCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEec
Confidence 78999999987 75554 899999998876432110000 111 1236666666666 89999999986
Q ss_pred Cc
Q psy16902 71 SG 72 (90)
Q Consensus 71 ~~ 72 (90)
..
T Consensus 218 ~~ 219 (246)
T 4dzb_B 218 GL 219 (246)
T ss_dssp CB
T ss_pred CC
Confidence 43
No 499
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.57 E-value=2.2e-06 Score=39.65 Aligned_cols=80 Identities=20% Similarity=0.245 Sum_probs=50.1
Q ss_pred CCCceEEEEEEEccCCCC---CcEEEEeeCCE-----Ec-C--------CCCceEEEE--eCCeEEEEEcCCCCCCCeEE
Q psy16902 3 PQKRKIHFEARIEPVGDP---SMRVDWFINGR-----PL-P--------ASSRATTTF--KFGFISLDLLSIVLHDSGEY 63 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~~---~~~~~w~~~~~-----~~-~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~g~y 63 (90)
.+|++++|.|... ... ...+.|++... .+ . ...++.... ..+...|.|.+++.+|.|.|
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~DsG~Y 90 (117)
T 1xed_A 13 VEGNSVSITCYYP--PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRY 90 (117)
T ss_dssp ETTCCEEEEEECC--CCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ecCCCEEEEeEec--CCcCCCCceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChHHCEEE
Confidence 4699999999875 321 35689987632 11 0 123454432 23456799999999999999
Q ss_pred EEEEEcCCcceEeEEEEEEec
Q psy16902 64 TVRVTNNSGSAESTALLSVQG 84 (90)
Q Consensus 64 ~C~~~~~~~~~~~~~~l~v~~ 84 (90)
.|.+........-...+.|.+
T Consensus 91 ~C~v~~~~~~l~f~~~~~~~~ 111 (117)
T 1xed_A 91 KCGLGINSRGLSFDVSLEVLE 111 (117)
T ss_dssp EEEESCGGGCCEEEEEEEEEC
T ss_pred EEEEEeCCCCeeEEEEEEEee
Confidence 999876433333344555543
No 500
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=98.57 E-value=3.7e-06 Score=39.37 Aligned_cols=66 Identities=14% Similarity=0.159 Sum_probs=45.6
Q ss_pred CCCceEEEEEEEccCCC--CCcEEEEeeCC--E---Ec---CC-----------CCceEEEEe--CCeEEEEEcCCCCCC
Q psy16902 3 PQKRKIHFEARIEPVGD--PSMRVDWFING--R---PL---PA-----------SSRATTTFK--FGFISLDLLSIVLHD 59 (90)
Q Consensus 3 ~~g~~~~l~C~~~~~~~--~~~~~~w~~~~--~---~~---~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~ 59 (90)
.+|++++|.|.+. +. ....+.|++.. . .+ .. ..|+....+ .+...|.|.++...|
T Consensus 13 ~~G~~vtL~C~~s--~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~D 90 (127)
T 1mqk_H 13 QPGGSLKLSCAAS--GFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSED 90 (127)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCCEEEEEEeC--CCccCCcEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEECCCCHHH
Confidence 5699999999986 43 24668998742 1 11 11 134544432 345679999999999
Q ss_pred CeEEEEEEEcC
Q psy16902 60 SGEYTVRVTNN 70 (90)
Q Consensus 60 ~g~y~C~~~~~ 70 (90)
.|.|.|.+.+.
T Consensus 91 sg~Y~C~~~~~ 101 (127)
T 1mqk_H 91 TAMYYCVRHEY 101 (127)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEecC
Confidence 99999998764
Done!