BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16903
(421 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 154 GAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDK--LGDKCDGKAFDTAMGIEINAQ 211
G R+ I P F + + + E+ L ++ G D + + + + A+
Sbjct: 109 GPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAAR 168
Query: 212 RDSKSDYVRAVYE---ISELTIVRSLRPWLWHPL--VFKWT-KYGRRYNQCLSVLHGFTN 265
+ Y+ E ++ T+ R + + PL +++ RR+N L+ LH +
Sbjct: 169 CLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVD 228
Query: 266 KVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREE 325
++I ER+ G KPD L LLEA + P+ + EI ++
Sbjct: 229 EIIAERRA--------SGQKPDD-------------LLTALLEAKDDNGDPIGEQEIHDQ 267
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V + G +T + I W L L HP + D++ E++ + R + D+ +++
Sbjct: 268 VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG---GRPVAFEDVRKLRHT 324
Query: 386 ERVIKEDL 393
VI E +
Sbjct: 325 GNVIVEAM 332
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 146 RCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCD-GKAF---- 200
+ A+ I +W R +++PTF L V + + +LV L + + GK
Sbjct: 93 KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKD 152
Query: 201 -----------DTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKY 249
T+ G+ I++ + + +V ++ L P+ VF +
Sbjct: 153 VFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF---LDPFFLSITVFPFLI- 208
Query: 250 GRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEA 309
L VL N + R+ +K++ K ED +K R+ FL L++++
Sbjct: 209 -----PILEVL----NICVFPREVTNFLRKSVKRMKESRLEDT---QKHRVDFLQLMIDS 256
Query: 310 SEHAST----PLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
T L+D+E+ + F+F G++TT++ + + ++ L +HP Q K+ E+D +
Sbjct: 257 QNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV 316
Query: 366 FAEDPDRKITMRD-LNDMKYLERVIKEDL 393
P++ D + M+YL+ V+ E L
Sbjct: 317 L---PNKAPPTYDTVLQMEYLDMVVNETL 342
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 146 RCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCD-GKAF---- 200
+ A+ I +W R +++PTF L V + + +LV L + + GK
Sbjct: 95 KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKD 154
Query: 201 -----------DTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKY 249
T+ G+ I++ + + +V ++ L P+ VF +
Sbjct: 155 VFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF---LDPFFLSITVFPFLI- 210
Query: 250 GRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEA 309
L VL N + R+ +K++ K ED +K R+ FL L++++
Sbjct: 211 -----PILEVL----NICVFPREVTNFLRKSVKRMKESRLEDT---QKHRVDFLQLMIDS 258
Query: 310 SEHAST----PLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
T L+D+E+ + F+F G++TT++ + + ++ L +HP Q K+ E+D +
Sbjct: 259 QNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV 318
Query: 366 FAEDPDRKITMRD-LNDMKYLERVIKEDL 393
P++ D + M+YL+ V+ E L
Sbjct: 319 L---PNKAPPTYDTVLQMEYLDMVVNETL 344
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 146 RCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCD-GKAF---- 200
+ A+ I +W R +++PTF L V + + +LV L + + GK
Sbjct: 94 KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKD 153
Query: 201 -----------DTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKY 249
T+ G+ I++ + + +V ++ L P+ VF +
Sbjct: 154 VFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF---LDPFFLSITVFPFLI- 209
Query: 250 GRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEA 309
L VL N + R+ +K++ K ED +K R+ FL L++++
Sbjct: 210 -----PILEVL----NICVFPREVTNFLRKSVKRMKESRLEDT---QKHRVDFLQLMIDS 257
Query: 310 SEHAST----PLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
T L+D+E+ + F+F G++TT++ + + ++ L +HP Q K+ E+D +
Sbjct: 258 QNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV 317
Query: 366 FAEDPDRKITMRD-LNDMKYLERVIKEDL 393
P++ D + M+YL+ V+ E L
Sbjct: 318 L---PNKAPPTYDTVLQMEYLDMVVNETL 343
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 11/239 (4%)
Query: 156 KWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSK 215
+WH R++I F L ++ F EK + LV+ L K DG+ T + ++ +
Sbjct: 85 RWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQ---TPVSMQDMLTYTAM 141
Query: 216 SDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLL 275
+A + + ++ + +P L + N L G K ++E ++ +
Sbjct: 142 DILAKAAFGMETSMLLGAQKP-LSQAVKLMLEGITASRNTLAKFLPG-KRKQLREVRESI 199
Query: 276 EEKKNIGGD-KPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGH 334
+ +G D E G++ L +L+A E A D + + TF GH
Sbjct: 200 RFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQ---DDEGLLDNFVTFFIAGH 256
Query: 335 DTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
+T+ + +++ L P ++ AE+D + R + DL ++YL +V+KE L
Sbjct: 257 ETSANHLAFTVMELSRQPEIVARLQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKESL 313
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 27/159 (16%)
Query: 241 PLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRM 300
P+ T +G+ + ++L K+IK R+Q +P + ED
Sbjct: 185 PIPLPNTLFGKS-QRARALLLAELEKIIKARQQ-----------QPPSEEDA-------- 224
Query: 301 AFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
L +LL A + + PL+ E+++++ +F GH+T T+ + LLG H +++V
Sbjct: 225 --LGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQ 282
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKE--DLIPTI 397
E + + +++T L M YL++V++E LIP +
Sbjct: 283 EQNKL---QLSQELTAETLKKMPYLDQVLQEVLRLIPPV 318
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ EGH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ +GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ +GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 250
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 251 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 300
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 301 LV---DPVPSYKQVKQLKYVGMVLNEAL 325
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 250
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 251 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 300
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 301 LV---DPVPSYKQVKQLKYVGMVLNEAL 325
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 250
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 251 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 300
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 301 LV---DPVPSYKQVKQLKYVGMVLNEAL 325
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D I ++ TF+ GH+TT+ + ++L+ L +PH KV E +
Sbjct: 248 ----------PLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 209 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGE--------------- 253
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 254 ----------PLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARV 303
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 304 LV---DPVPSYKQVKQLKYVGMVLNEAL 328
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH++T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH++T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH++T+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSYKQVKQLKYVGMVLNEAL 323
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 311 EHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDP 370
E+A+ L+D +I V G DT T I WSL L +P Q K+ ELDT+
Sbjct: 269 ENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR-- 326
Query: 371 DRKITMRDLNDMKYLERVIKE 391
R+ + D + + Y+E I E
Sbjct: 327 SRRPRLSDRSHLPYMEAFILE 347
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 248
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ TF+ GH+ T+ + ++L+ L +PH K E +
Sbjct: 249 ----------PLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARV 298
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 299 LV---DPVPSHKQVKQLKYVGMVLNEAL 323
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 33/148 (22%)
Query: 251 RRYNQCLSVLHGFTNKVIKERKQLLEEKKNI-----GGDKPDTTEDEDLGKKKRMAFLDL 305
R++ + + V++ +K+I +RK E+ ++ G P+T E
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGE--------------- 247
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTI 365
PL D IR ++ T + GH+TT+ + ++L+ L +PH K E +
Sbjct: 248 ----------PLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 366 FAEDPDRKITMRDLNDMKYLERVIKEDL 393
D + + + +KY+ V+ E L
Sbjct: 298 LV---DPVPSYKQVKQLKYVGMVLNEAL 322
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V+ G DT T I WSL L + P Q K+ ELDT+ +R+ + D + YL
Sbjct: 287 VNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGR--ERRPRLSDRPQLPYL 344
Query: 386 ERVIKE 391
E I E
Sbjct: 345 EAFILE 350
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 302 FLDLLLEASEHASTP-LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
LD+L+ TP + EI + MF GH T++ W+L L H V
Sbjct: 225 MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVID 284
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
ELD ++ + R ++ L + LE V+KE L
Sbjct: 285 ELDELYGD--GRSVSFHALRQIPQLENVLKETL 315
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 302 FLDLLLEASEHASTP-LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
LD+L+ TP + EI + MF GH T++ W+L L H V
Sbjct: 225 MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVID 284
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
ELD ++ + R ++ L + LE V+KE L
Sbjct: 285 ELDELYGD--GRSVSFHALRQIPQLENVLKETL 315
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 302 FLDLLLEASEHASTP-LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
LD+L+ TP + EI + MF GH T++ W+L L H V
Sbjct: 225 MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVID 284
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
ELD ++ + R ++ L + LE V+KE L
Sbjct: 285 ELDELYGD--GRSVSFHALRQIPQLENVLKETL 315
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 302 FLDLLLEASEHASTP-LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
LD+L+ TP + EI + MF GH T++ W+L L H V
Sbjct: 225 MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVID 284
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
ELD ++ + R ++ L + LE V+KE L
Sbjct: 285 ELDELYGD--GRSVSFHALRQIPQLENVLKETL 315
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 239 WHPLVFKWTKYGRRYNQCLSVLHGFTNKVIK---ERKQLLEEKKNIGGDKPDTTEDEDLG 295
+H L W + + L L G KVIK E K+ + E+ D DL
Sbjct: 186 FHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDL- 244
Query: 296 KKKRMAFLDLLLEASEHASTPLTDVE-IREEVDTFMFEGHDTTTAGICWSLFLLGSHPHY 354
L + +E +H++ L ++ I V F G +TT+ + + L +L +P
Sbjct: 245 ----TDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEI 300
Query: 355 QDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE 391
++K+ E+D + P R ++D +M Y++ V+ E
Sbjct: 301 EEKLHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHE 335
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 254 NQCLSVLH--GFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASE 311
N +LH KV++ +K L + + + T + + AFL + +A
Sbjct: 203 NAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKG 262
Query: 312 HASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPD 371
+ + D +R V G TT+ + W L L+ HP Q +V E+D + +
Sbjct: 263 NPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ--V 320
Query: 372 RKITMRDLNDMKYLERVIKE-----DLIP 395
R+ M D M Y VI E D++P
Sbjct: 321 RRPEMGDQAHMPYTTAVIHEVQRFGDIVP 349
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 302 FLD-LLLEASEHASTPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L+ E P T+ ++ V T F G +T + + + LL HP + K
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
V E+D + + +R+ D M Y+E VI E D+IP
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 255 QCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLD-LLLEASEHA 313
QCL L F K ++ ++ L+ P++ D F+D L+ E
Sbjct: 217 QCLQGLEDFIAKKVEHNQRTLD---------PNSPRD----------FIDSFLIRMQEEE 257
Query: 314 STPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDP 370
P T+ ++ V T G +T + + + LL HP + KV E+D + +
Sbjct: 258 KNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK-- 315
Query: 371 DRKITMRDLNDMKYLERVIKE-----DLIP 395
+R+ D M Y+E VI E D+IP
Sbjct: 316 NRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 301 AFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
AFL + +A + + D +R V G TT+ + W L L+ HP Q +V
Sbjct: 252 AFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQ 311
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
E+D + + R+ M D M Y VI E D++P
Sbjct: 312 EIDDVIGQ--VRRPEMGDQAHMPYTTAVIHEVQRFGDIVP 349
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 303 LDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAEL 362
L LL+A+ PLTD E+ + + G T++ W F L Q K E
Sbjct: 234 LQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQ 293
Query: 363 DTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
T+ E+ +T L D+ L+R IKE L
Sbjct: 294 KTVCGENLP-PLTYDQLKDLNLLDRCIKETL 323
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 301 AFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
A+LD + + S+ + + V + G +TTT + W++ + +P+ Q +V
Sbjct: 253 AYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQK 312
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
E+D I P+ K + D M Y E V+ E L
Sbjct: 313 EIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVL 343
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 302 FLD-LLLEASEHASTPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L+ E P T+ ++ V T F G +T + + + LL HP + K
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
V E+D + + +R+ D M Y E VI E D++P
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYTEAVIHEIQRFGDMLP 345
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 301 AFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
A+LD + + S+ + + V + G +TTT + W++ + +P+ Q +V
Sbjct: 253 AYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQK 312
Query: 361 ELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
E+D I P+ K + D M Y E V+ E L
Sbjct: 313 EIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVL 343
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 317 LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITM 376
LT + + + + DT + + + LFL+ HP+ ++ + E+ T+ E R I +
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE---RDIKI 347
Query: 377 RDLNDMKYLERVIKEDL 393
D+ +K +E I E +
Sbjct: 348 DDIQKLKVMENFIYESM 364
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 302 FLD-LLLEASEHASTPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L+ E P T+ ++ V T G +T + + + LL HP + K
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
V E+D + + +R+ D M Y+E VI E D+IP
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 302 FLD-LLLEASEHASTPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L+ E P T+ ++ V T G +T + + + LL HP + K
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
V E+D + + +R+ D M Y+E VI E D+IP
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 302 FLD-LLLEASEHASTPLTDVEIREEVDT---FMFEGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L+ E P T+ ++ V T G +T + + + LL HP + K
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAK 304
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIP 395
V E+D + + +R+ D M Y+E VI E D+IP
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 328 TFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLER 387
+ F G +TT+ + + L+ +PH ++V E++ + P R + D M Y E
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIG--PHRPPELHDRAKMPYTEA 332
Query: 388 VIKE-----DLIP 395
VI E DL+P
Sbjct: 333 VIYEIQRFSDLLP 345
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 317 LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKIT- 375
L+ E+ V +TT + W L+ L +P Q ++ E+ ++ PD +
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL---PDNQTPR 335
Query: 376 MRDLNDMKYLERVIKED--LIPTI 397
DL +M YL+ +KE L P++
Sbjct: 336 AEDLRNMPYLKACLKESMRLTPSV 359
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V + F G +TT+ + + L+ +PH ++V E++ + R + D M Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYT 330
Query: 386 ERVIKE-----DLIP 395
+ VI E DLIP
Sbjct: 331 DAVIHEIQRLGDLIP 345
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V + F G +TT+ + + L+ +PH ++V E++ + R + D M Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYT 330
Query: 386 ERVIKE-----DLIP 395
+ VI E DLIP
Sbjct: 331 DAVIHEIQRLGDLIP 345
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V + F G +TT+ + + L+ +PH ++V E++ + R + D M Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYT 330
Query: 386 ERVIKE-----DLIP 395
+ VI E DLIP
Sbjct: 331 DAVIHEIQRLGDLIP 345
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
V + F G +TT+ + + L+ +PH ++V E++ + R + D M Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYT 330
Query: 386 ERVIKE-----DLIP 395
+ VI E DLIP
Sbjct: 331 DAVIHEIQRLGDLIP 345
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 325 EVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKV 358
E T + GH+T + + WS LL P +Q +V
Sbjct: 214 EAVTLLVAGHETVASALTWSFLLLSHRPDWQKRV 247
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 246 WTKYGRRYNQCLSVLHGFTNKVIKE----RKQLLEEKKNIGGDKPDTTEDEDLGKKKRMA 301
W + ++ + G NK++K + +LE+ K E +
Sbjct: 195 WIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKE---------HQESMDMNNPQD 245
Query: 302 FLDLLL---EASEHASTPLTDVEIREEVDTFMF-EGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L E +H +E E +F G +TT+ + ++L LL HP K
Sbjct: 246 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK 305
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIPT 396
V E++ + +R M+D + M Y + V+ E DL+PT
Sbjct: 306 VQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT 347
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 325 EVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKV 358
E T + GH+T + + WS LL P +Q +V
Sbjct: 214 EAVTLLVAGHETVASALTWSFLLLSHRPDWQKRV 247
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 24/164 (14%)
Query: 246 WTKYGRRYNQCLSVLHGFTNKVIKE----RKQLLEEKKNIGGDKPDTTEDEDLGKKKRMA 301
W + + L G NK++K + +LE+ K E +
Sbjct: 193 WIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKE---------HQESMDMNNPQD 243
Query: 302 FLDLLL---EASEHASTPLTDVEIREEVDTFMF-EGHDTTTAGICWSLFLLGSHPHYQDK 357
F+D L E +H +E E +F G +TT+ + ++L LL HP K
Sbjct: 244 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK 303
Query: 358 VCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE-----DLIPT 396
V E++ + +R M+D + M Y + V+ E DL+PT
Sbjct: 304 VQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT 345
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 317 LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELD--TIFAEDPDRKI 374
L+D I + G +TTT+ + W+L L +P + K+ E+D F+ P
Sbjct: 269 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTP---- 324
Query: 375 TMRDLNDMKYLERVIKEDL 393
T+ D N + LE I+E L
Sbjct: 325 TISDRNRLLLLEATIREVL 343
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 272 KQLLEEKKN-IGGDKPDTTED--EDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDT 328
KQL K++ + G D T+ + +G+++ LLE H S VD
Sbjct: 238 KQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSV----------VDL 287
Query: 329 FMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPD-RKITMRDLNDMKYLER 387
F+ G +TT + + W++ L HP Q ++ ELD ++T +D + L
Sbjct: 288 FI-GGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNA 346
Query: 388 VIKEDL 393
I E L
Sbjct: 347 TIAEVL 352
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 334 HDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDL 393
DT + + W L L +P Q +V AELD + DR M D ++ Y+ + E +
Sbjct: 292 QDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR--DRLPCMGDQPNLPYVLAFLYEAM 349
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 333 GHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE- 391
G +TT+ + + L+ +PH ++V E++ + R + D M Y + VI E
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYTDAVIHEI 337
Query: 392 ----DLIP 395
DLIP
Sbjct: 338 QRLGDLIP 345
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 333 GHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE- 391
G +TT+ + ++L LL HP KV E++ + +R M+D M Y + V+ E
Sbjct: 281 GTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGR--NRSPCMQDRGHMPYTDAVVHEV 338
Query: 392 ----DLIPT 396
DLIPT
Sbjct: 339 QRYIDLIPT 347
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 333 GHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE- 391
G +TT+ + + L LL HP KV E+D + R M+D + M Y + V+ E
Sbjct: 280 GTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGR--HRSPCMQDRSHMPYTDAVVHEI 337
Query: 392 ----DLIPT 396
DL+PT
Sbjct: 338 QRYSDLVPT 346
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 306 LLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCA 360
L++ASE+ LTD EI + + GH+TT + I ++ L +HP + V +
Sbjct: 217 LIQASENGDH-LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS 270
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 277 EKKNIGGDKPDTTEDEDLGKKKRMA-FLDLLLEASEHASTPLTDVEIREEVDTFMFEGHD 335
E + I G+ E E+ K + L LL+A T ++ E+ + MF G
Sbjct: 212 ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQH 271
Query: 336 TTTAGICWSLFLLGSHP---HYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKED 392
T+T WS+ L HP + DK+ E+D E P + +++M + ER ++E
Sbjct: 272 TSTITTSWSMLHL-MHPKNKKWLDKLHKEID----EFPAQLNYDNVMDEMPFAERCVRES 326
Query: 393 L 393
+
Sbjct: 327 I 327
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 277 EKKNIGGDKPDTTEDEDLGKKKRMA-FLDLLLEASEHASTPLTDVEIREEVDTFMFEGHD 335
E + I G+ E E+ K + L LL+A T ++ E+ + MF G
Sbjct: 206 ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQH 265
Query: 336 TTTAGICWSLFLLGSHP---HYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKED 392
T+T WS+ L HP + DK+ E+D E P + +++M + ER ++E
Sbjct: 266 TSTITTSWSMLHL-MHPKNKKWLDKLHKEID----EFPAQLNYDNVMDEMPFAERCVRES 320
Query: 393 L 393
+
Sbjct: 321 I 321
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 277 EKKNIGGDKPDTTEDEDLGKKKRMA-FLDLLLEASEHASTPLTDVEIREEVDTFMFEGHD 335
E + I G+ E E+ K + L LL+A T ++ E+ + MF G
Sbjct: 221 ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQH 280
Query: 336 TTTAGICWSLFLLGSHP---HYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKED 392
T+T WS+ L HP + DK+ E+D E P + +++M + ER ++E
Sbjct: 281 TSTITTSWSMLHL-MHPKNKKWLDKLHKEID----EFPAQLNYDNVMDEMPFAERCVRES 335
Query: 393 L 393
+
Sbjct: 336 I 336
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 333 GHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKE- 391
G +TT+ + +SL LL HP +V E++ + R M+D + M Y + VI E
Sbjct: 277 GTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGR--HRSPCMQDRSRMPYTDAVIHEI 334
Query: 392 ----DLIPT 396
DL+PT
Sbjct: 335 QRFIDLLPT 343
>pdb|3BGA|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacteroides
Thetaiotaomicron Vpi-5482
pdb|3BGA|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacteroides
Thetaiotaomicron Vpi-5482
Length = 1010
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 285 KPDTTEDEDLGKKK-----RMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTA 339
+P T D LG K R A+L+L E +TPL D + D F+ G+ TTA
Sbjct: 670 EPHATVDVTLGAVKLPNTVREAYLNLSWSRKE--ATPLVDTDWEVAYDQFVLAGNKNTTA 727
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 302 FLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQD 356
L L+L+A H ++ EI V TF+F GH+T + + ++ L +HP D
Sbjct: 205 LLALMLDA--HDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLD 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,262,953
Number of Sequences: 62578
Number of extensions: 563847
Number of successful extensions: 1377
Number of sequences better than 100.0: 94
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1223
Number of HSP's gapped (non-prelim): 142
length of query: 421
length of database: 14,973,337
effective HSP length: 101
effective length of query: 320
effective length of database: 8,652,959
effective search space: 2768946880
effective search space used: 2768946880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)