RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16905
(68 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 107 bits (270), Expect = 6e-30
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
++YL +V+KESLRL+P R+L E+T VP T + + + R F +P
Sbjct: 302 LQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPL 361
Query: 61 SFNPD 65
+FNPD
Sbjct: 362 TFNPD 366
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 105 bits (264), Expect = 5e-29
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+K +E I ES+R P V + R ED Y V GT I + I +HR + FP+PN
Sbjct: 353 LKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPN 411
Query: 61 SFNPDN 66
F +N
Sbjct: 412 EFTLEN 417
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 100 bits (251), Expect = 3e-27
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+++ VI E++RL P+V + R +++ G Y +PAG I + + R P + +
Sbjct: 321 LRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNL 380
Query: 61 SFNPD 65
F+PD
Sbjct: 381 EFDPD 385
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 99.7 bits (249), Expect = 6e-27
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
M + ER +ES+R P + + R + D + G Y+VP G I H + FPEP
Sbjct: 312 MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 371
Query: 61 SFNPD 65
++P+
Sbjct: 372 RWDPE 376
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 98.1 bits (245), Expect = 2e-26
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+ L+R IKE+LRL P + + R+ Y +P G + V R D + E
Sbjct: 312 LNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERL 371
Query: 61 SFNPD 65
FNPD
Sbjct: 372 DFNPD 376
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 97.0 bits (242), Expect = 5e-26
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
M YL+ +KES+RL PSVPF R L + T G+Y +P GT + + + D F + +
Sbjct: 342 MPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSH 401
Query: 61 SFNPD 65
F P+
Sbjct: 402 KFRPE 406
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 95.4 bits (238), Expect = 2e-25
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+ LE V+KE+LRL P + + RV + + + + G + +R P+ FP+P+
Sbjct: 304 IPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH 363
Query: 61 SFNPD 65
F P
Sbjct: 364 DFVPA 368
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 93.2 bits (232), Expect = 1e-24
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+ L+ IKE+LRL P + R L D Y++PA T + V I+ + R P F +P
Sbjct: 334 VPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPE 393
Query: 61 SFNPD 65
+F+P
Sbjct: 394 NFDPT 398
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 93.1 bits (232), Expect = 1e-24
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
M YL++V++E LRL P V R L +D QF + P G ++ +I H PD +P+P
Sbjct: 301 MPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPE 360
Query: 61 SFNPD 65
F+P+
Sbjct: 361 KFDPE 365
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 91.9 bits (229), Expect = 4e-24
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF-GQYLVPAGTYINVEIFHVHRCPDQFPE- 58
+KY+ V+ E+LRL+P+ P EDT G+Y + G + V I +HR + +
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 59 PNSFNPD 65
F P+
Sbjct: 371 VEEFRPE 377
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 89.4 bits (222), Expect = 2e-23
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
Y E ++E R +P P + S+D ++ P G + ++++ + + +P
Sbjct: 271 PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 61 SFNPD 65
F P+
Sbjct: 331 EFRPE 335
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 88.6 bits (220), Expect = 5e-23
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
+ E ++E R +P PF+G ++ +D + GT + ++++ + P + P+
Sbjct: 273 SREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPD 332
Query: 61 SFNPD 65
F P+
Sbjct: 333 EFRPE 337
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 84.9 bits (210), Expect = 1e-21
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF----GQYLVPAGTYINVEIFHVHRCPDQF 56
M + V+ ESLR+ P VP + + V G + + P F
Sbjct: 327 MPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVF 386
Query: 57 PEPNSFNPD 65
P + PD
Sbjct: 387 DRPEEYVPD 395
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 85.0 bits (210), Expect = 1e-21
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF----GQYLVPAGTYINVEIFHVHRCPDQF 56
M+ + V+ E LR P V +D + V AG + R P F
Sbjct: 344 MELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF 403
Query: 57 PEPNSFNPD 65
+ F P+
Sbjct: 404 DRADEFVPE 412
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 78.4 bits (194), Expect = 2e-19
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 7 VIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
+E+LRL+P + R L G+ +P GT + + + R FP+ +F P+
Sbjct: 257 AFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPE 313
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 76.6 bits (189), Expect = 1e-18
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF----GQYLVPAGTYINVEIFHVHRCPDQF 56
+ L+ +IKESLRL + I R ED G Y + I + +H P+ +
Sbjct: 326 LPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 57 PEPNSFNPD 65
P+P +F D
Sbjct: 385 PDPLTFKYD 393
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 75.7 bits (187), Expect = 2e-18
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
M+YL+ V+ E+LRLFP + RV +D + +P G + + + +HR P + EP
Sbjct: 331 MEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPE 390
Query: 61 SFNPD 65
F P+
Sbjct: 391 KFLPE 395
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 71.4 bits (175), Expect = 8e-17
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF-----GQYLVPAGTYINVE-IFHVHRCPD 54
L+ V+ ESLRL PFI R + D ++ + G + + R P+
Sbjct: 328 TPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPE 386
Query: 55 QFPEPNSFNPD 65
+ +P F +
Sbjct: 387 IYTDPEVFKYN 397
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 66.2 bits (162), Expect = 5e-15
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 1 MKYLERVIKESLRLFPSVPFIGRVLSEDTQF-----GQYLVPAGTY--INVEIFHVHRCP 53
+ V+ E+LRL + R +++D + +Y + G + P
Sbjct: 309 TPVFDSVLWETLRLTAAALIT-RDVTQDKKICLSNGQEYHLRRGDRLCVFP-FISPQMDP 366
Query: 54 DQFPEPNSFNPD 65
+P F D
Sbjct: 367 QIHQQPEMFQFD 378
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 58.4 bits (142), Expect = 3e-12
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y E V+ E LR VP I SED Y +P GT + ++ VH + +P
Sbjct: 332 MPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP 391
Query: 60 NSFNPDN 66
F+P+
Sbjct: 392 EVFHPER 398
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 58.0 bits (141), Expect = 4e-12
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y + V+ E R +P + ++ D +F YL+P GT I + + V +FP P
Sbjct: 328 MPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNP 387
Query: 60 NSFNPDN 66
F+P +
Sbjct: 388 EMFDPHH 394
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 58.0 bits (141), Expect = 4e-12
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
+ L I E LRL P VP + + + Y +P G + + H + +P
Sbjct: 341 LPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQP 400
Query: 60 NSFNPDN 66
+ F PD
Sbjct: 401 HEFRPDR 407
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 57.9 bits (141), Expect = 4e-12
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
+ LE I+E LRL P P I + D+ G++ V GT + + ++ +H ++ +P
Sbjct: 332 LLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQP 391
Query: 60 NSFNPDN 66
+ F P+
Sbjct: 392 DQFMPER 398
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 58.0 bits (141), Expect = 5e-12
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y VI E R VP + + S D + + +P GT + + V + + +P
Sbjct: 331 MPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKP 390
Query: 60 NSFNPDN 66
F+P++
Sbjct: 391 FRFHPEH 397
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 57.6 bits (140), Expect = 5e-12
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y + VI E RL +PF + +++DTQF Y++P T + + P F P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 60 NSFNPDN 66
N+FNP +
Sbjct: 387 NTFNPGH 393
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 57.6 bits (140), Expect = 6e-12
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
+ Y+ + E++R VP I + +T Y +P T + V + V+ P ++P P
Sbjct: 338 LPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNP 397
Query: 60 NSFNPDN 66
+F+P
Sbjct: 398 ENFDPAR 404
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 57.6 bits (140), Expect = 6e-12
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y+E VI E R +P + R + +DT+F + +P GT + + V R P F P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 60 NSFNPDN 66
FNP +
Sbjct: 387 QDFNPQH 393
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 57.6 bits (140), Expect = 7e-12
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
M Y++ V+ E R VP + + DT F YL+P GT + + V +FP+P
Sbjct: 326 MPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDP 385
Query: 60 NSFNPDN 66
F P++
Sbjct: 386 EKFKPEH 392
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 57.2 bits (139), Expect = 9e-12
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 MKYLERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEP 59
+ YLE I E+ R +PF I + DT + +P + V + V+ P+ + +P
Sbjct: 341 LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDP 400
Query: 60 NSFNPDN 66
+ F P+
Sbjct: 401 SEFRPER 407
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 46.1 bits (110), Expect = 7e-08
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
VI+E++R P V + R +D G + VP G + + + HR P P+ F+
Sbjct: 289 ASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 64 PD 65
PD
Sbjct: 349 PD 350
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 45.0 bits (107), Expect = 2e-07
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+R + E LRL P++ R + + + G++++ G + V + +R P+ F EP+ +
Sbjct: 255 AQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLD 314
Query: 64 PD 65
D
Sbjct: 315 VD 316
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 44.6 bits (106), Expect = 2e-07
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
++E +R P V + R ED + G + +P G+ + + +R P +FP+P+ +
Sbjct: 287 TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 64 PD 65
Sbjct: 347 VH 348
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 44.5 bits (106), Expect = 2e-07
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
L + ++E LR PSV R L D + + + V +R P ++ P+ F+
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 64 PD 65
+
Sbjct: 326 IE 327
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 44.5 bits (106), Expect = 3e-07
Identities = 14/62 (22%), Positives = 24/62 (38%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ ++E LR RV SED + G + + + +R P F P+ F+
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 64 PD 65
Sbjct: 327 IT 328
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 44.1 bits (105), Expect = 3e-07
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
L ++E LR R +E+ + G +P + + V +R P QFP+P+ F+
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 64 PD 65
Sbjct: 334 VT 335
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 44.2 bits (105), Expect = 3e-07
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ R I E+LR P V I R LS+DT G + T + I +R P+ F +P+ FN
Sbjct: 302 VPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFN 361
Query: 64 PD 65
Sbjct: 362 IH 363
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 43.8 bits (104), Expect = 5e-07
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+I E +R+ P R +ED + G L+ AG+ I I +R P+ F +P+ F+
Sbjct: 266 RAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 64 PD 65
Sbjct: 326 HT 327
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 42.6 bits (101), Expect = 1e-06
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ +++E LR P P + R ++ T+ +PA +N + +R D +P+ F+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFD 333
Query: 64 PD 65
P
Sbjct: 334 PS 335
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 41.8 bits (99), Expect = 2e-06
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ V++E LR I R+ ED + G + AG + V I ++R + P+ F+
Sbjct: 276 VSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD 335
Query: 64 PD 65
Sbjct: 336 AR 337
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 41.5 bits (98), Expect = 3e-06
Identities = 9/62 (14%), Positives = 25/62 (40%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+E++R V R + D + + G + + + +R P ++ +P+ ++
Sbjct: 284 ARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYD 343
Query: 64 PD 65
Sbjct: 344 IT 345
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 41.5 bits (98), Expect = 3e-06
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E LR P++P RV +ED + +P GT + + HR P F + + F
Sbjct: 286 APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 345
Query: 63 NPD 65
+
Sbjct: 346 DIT 348
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 40.3 bits (95), Expect = 8e-06
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E LR V R +ED + +PAG + + + +R D PEP+
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 63 NPD 65
+
Sbjct: 329 DIT 331
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 39.9 bits (94), Expect = 1e-05
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 4 LERVIKESLRLFPSVPFIG--RVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNS 61
+ R ++E LR + + R SED +FG + AG + ++ + F P
Sbjct: 274 MARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEE 333
Query: 62 FNPD 65
F+
Sbjct: 334 FDAA 337
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 40.0 bits (94), Expect = 1e-05
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
L+ ++E LR V R E ++PAG + V + HR P++FP+P+ F
Sbjct: 296 LDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 63 NPD 65
+
Sbjct: 356 DIR 358
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 39.9 bits (94), Expect = 1e-05
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 10 ESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPDNKR 68
E +R +P+V R D + G + + + P F P D
Sbjct: 273 ELMRRYPTVAV-SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGL 330
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 39.5 bits (93), Expect = 1e-05
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 4 LERVIKESLRLFPSVPFIG--RVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNS 61
R I E LR P +G R+ ED + + AG + V +R P+ FP+P+
Sbjct: 274 RPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR 333
Query: 62 FNPD 65
+ +
Sbjct: 334 IDFE 337
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 39.6 bits (93), Expect = 1e-05
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
L+R ++E R F V R + D +F ++ G I + +P + +
Sbjct: 289 LQRGVEELFRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVD 347
Query: 64 PD 65
Sbjct: 348 LS 349
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 39.6 bits (93), Expect = 1e-05
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVP-FIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ + E LR + R +D ++ + G + + I R F P+ F
Sbjct: 287 MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 63 NPD 65
+
Sbjct: 347 DVR 349
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 39.6 bits (93), Expect = 1e-05
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+R + E +R R+ ED + G + + +R P P+ +
Sbjct: 269 AQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRL 328
Query: 63 NPD 65
+
Sbjct: 329 DVT 331
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 39.1 bits (92), Expect = 2e-05
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
++E+LR P V RV E + ++ G + V I +R + F +P+SF PD
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 39.1 bits (92), Expect = 2e-05
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ + E LR+ RV +ED + VPA + + + P+QF +P
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERV 341
Query: 63 NPD 65
+
Sbjct: 342 DFH 344
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 38.8 bits (91), Expect = 2e-05
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E LR GRV + D + L+ AG + V +R + +P++
Sbjct: 277 VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL 336
Query: 63 NPD 65
+
Sbjct: 337 DIH 339
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 38.8 bits (91), Expect = 2e-05
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
ERV+ E +R V R+ +D L+ AG Y+ I +R P+P+
Sbjct: 278 AERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVL 337
Query: 63 NPD 65
+ +
Sbjct: 338 DAN 340
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 38.8 bits (91), Expect = 3e-05
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 4 LERVIKESLRLFPSVPFIG--RVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNS 61
+ E LR +G R+ ED + + AG + V +R PD FP+P+
Sbjct: 277 RGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR 336
Query: 62 FNPD 65
+ D
Sbjct: 337 IDLD 340
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 38.8 bits (91), Expect = 3e-05
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
L I+E LR V + RVL+ DT+F + AG + + + F EP F+
Sbjct: 263 LPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFD 322
Query: 64 PD 65
Sbjct: 323 VQ 324
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 38.4 bits (90), Expect = 3e-05
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E LR+ S + R+ + D Q G LV G + V + + P+ FP P S
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 63 NPD 65
D
Sbjct: 326 ELD 328
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 38.4 bits (90), Expect = 3e-05
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
+ E LR + GR+++++ G + G + R F P++ +
Sbjct: 269 VDELLRFYGPAMV-GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIE 325
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 38.4 bits (90), Expect = 3e-05
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E LR F RV + D + G + G + + P EP F
Sbjct: 270 VGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF 329
Query: 63 NPD 65
+
Sbjct: 330 DIT 332
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 38.3 bits (90), Expect = 4e-05
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ I+E+LR P V R E + G + G Y+ V I +R + F + F
Sbjct: 240 YLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 64 PD 65
PD
Sbjct: 300 PD 301
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 38.4 bits (90), Expect = 4e-05
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
++E LR F R+ +ED + G + AG + V + + P F +P
Sbjct: 278 TPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVL 337
Query: 63 NPD 65
+ +
Sbjct: 338 DVE 340
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 38.1 bits (89), Expect = 4e-05
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
L R +E R FP V R++++D ++ + G I + PEP +
Sbjct: 288 LMRGAEEMFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLD 346
Query: 64 PD 65
Sbjct: 347 FS 348
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 38.1 bits (89), Expect = 4e-05
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
+ +E LR F V GR+L+ D +F + G I + + P +
Sbjct: 282 IPAACEELLRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVD 340
Query: 64 PD 65
Sbjct: 341 FS 342
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 38.0 bits (89), Expect = 4e-05
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 4 LERVIKESLRLFPSVPFIG--RVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNS 61
+ ++E R P R ED + AG + +R QFP+ +
Sbjct: 287 IPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADR 346
Query: 62 FNPD 65
+ D
Sbjct: 347 IDVD 350
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 37.6 bits (88), Expect = 7e-05
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQF-PEPNSF 62
+ ++E LRL V + R + D G +PAG + + +R Q+ P+
Sbjct: 283 IPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAEL 342
Query: 63 NPD 65
+
Sbjct: 343 DVT 345
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 36.9 bits (86), Expect = 1e-04
Identities = 12/58 (20%), Positives = 29/58 (50%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
++E +R V ++ R L++D + + AG +++ +R +F +P +F+
Sbjct: 312 VEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLA 369
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 37.2 bits (87), Expect = 1e-04
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 8 IKESLRLFPSVP-FIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
++E+LR + + R +ED+ + G + V + +R F EP+ F
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIG 280
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 36.9 bits (86), Expect = 1e-04
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 4 LERVIKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFN 63
++ V++E LR + RV + D +P+GT + + +R P +F +P++F
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 64 PD 65
P
Sbjct: 347 PG 348
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 36.8 bits (86), Expect = 1e-04
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSF 62
+ ++E R + I R ED G LV A I +R + F P+ F
Sbjct: 273 APQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 332
Query: 63 NPD 65
N +
Sbjct: 333 NMN 335
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 36.5 bits (85), Expect = 2e-04
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 4 LERVIKESLRLFPSVPFIG-RVLSEDTQF--GQYLVPAGTYINVEIFHVHRCPDQFPEPN 60
V++E+LR P+V + R D G+ + G I +R PD + +
Sbjct: 275 WADVVEETLRHEPAVKHLPLRYAVTDIALPDGR-TIARGEPILASYAAANRHPDWHEDAD 333
Query: 61 SFNPD 65
+F+
Sbjct: 334 TFDAT 338
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 34.9 bits (81), Expect = 6e-04
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQF-PEPNS 61
V++E+LR + R +ED G ++PAG + V + R P +
Sbjct: 275 WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADR 334
Query: 62 FNPD 65
F+
Sbjct: 335 FDLT 338
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 33.1 bits (76), Expect = 0.003
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFPEPNSFNPD 65
++E++R V R + DT+ + AG ++ + + P QFPEP F+P
Sbjct: 326 VEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPT 383
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 32.3 bits (74), Expect = 0.005
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHV--HRCPDQFPEPNSFNPD 65
E +R V R D + + G V +F+ + + F +P +FN
Sbjct: 303 ADEIVRWATPVTAFQRTALRDYELSGVQIKKGQR--VVMFYRSANFDEEVFQDPFTFNIL 360
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 31.5 bits (72), Expect = 0.010
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHV--HRCPDQFPEPNSFNPD 65
+ E +R + + R D++ G + G V +++ +R + P F D
Sbjct: 302 VPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDK--VVMWYYSGNRDDEVIDRPEEFIID 359
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 31.1 bits (71), Expect = 0.012
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEIFHV--HRCPDQFPEPNSFNPD 65
+ E++R V R DT+ + G + + + +R + F P+ F+
Sbjct: 304 VDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDR--IMLSYPSANRDEEVFSNPDEFDIT 361
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.2 bits (70), Expect = 0.015
Identities = 7/20 (35%), Positives = 9/20 (45%), Gaps = 5/20 (25%)
Query: 17 SVPFIGRVLSEDTQFGQYLV 36
S P IG + Q Y+V
Sbjct: 237 SCPLIG--V---IQLAHYVV 251
Score = 29.2 bits (65), Expect = 0.078
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 20/62 (32%)
Query: 11 SLRLFPSVPFIGRVLSE-DTQFGQYLVPAGTYINVEIFHVHRCPDQF----PEP-NSFNP 64
S R P LS + LVP ++ + +QF PEP F
Sbjct: 5 STR-----PL---TLSHGSLEHV-LLVPTASFFIAS---QLQ--EQFNKILPEPTEGFAA 50
Query: 65 DN 66
D+
Sbjct: 51 DD 52
>2a6h_D DNA-directed RNA polymerase beta' chain; RNA polymerase holoenzyme,
streptolydigin, antibiotic, transcription regulation;
HET: STD; 2.40A {Thermus thermophilus} SCOP: e.29.1.2
PDB: 1smy_D* 1zyr_D* 1iw7_D* 2a69_D* 2a6e_D 2a68_D*
2be5_D* 2cw0_D 2o5i_D 2o5j_D* 2ppb_D* 3aoh_D* 3aoi_D*
3dxj_D* 3eql_D* 1ynj_D* 1l9z_D 1l9u_D* 1ynn_D* 2auj_D
Length = 1524
Score = 28.2 bits (63), Expect = 0.15
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 8 IKESLRLFPSVPFIGRVLSEDTQFGQYLVPAGTYINVEI 46
++ R GRVL+ + + + G Y++++
Sbjct: 1132 LRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDD 1170
>1do5_A Human copper chaperone for superoxide dismutase domain II;
beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1
Length = 154
Score = 26.9 bits (60), Expect = 0.42
Identities = 13/44 (29%), Positives = 14/44 (31%), Gaps = 13/44 (29%)
Query: 37 PAGTYINVEI---------FHVHRCPDQFPEPNS----FNPDNK 67
P I I HVH+ D NS FNPD
Sbjct: 27 PERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGA 70
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 26.0 bits (58), Expect = 0.84
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 4 LERVIKESLRLFPSVPF-IGRVLSEDTQFGQYLVPAGTYI 42
++ +E LR V RV D + + AG +
Sbjct: 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVL 298
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase,
hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia
furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A*
Length = 572
Score = 25.2 bits (55), Expect = 1.7
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 2 KYLERVIKESLRLFPSVPFI 21
+YLE + + +F +
Sbjct: 321 QYLEDIYSDMAEVFDTTDIF 340
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 24.7 bits (53), Expect = 2.3
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 20 FIGRVLSEDTQFGQYLVPAGTYINVEIFHVHRCPDQFP 57
+ G++L + Q+ V + VEIF + PD +P
Sbjct: 61 YSGKILKNNETLVQHGVKPQEIVQVEIFSTN--PDLYP 96
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.143 0.442
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,098,101
Number of extensions: 49483
Number of successful extensions: 199
Number of sequences better than 10.0: 1
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 81
Length of query: 68
Length of database: 6,701,793
Length adjustment: 38
Effective length of query: 30
Effective length of database: 5,640,795
Effective search space: 169223850
Effective search space used: 169223850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.4 bits)