Query psy16910
Match_columns 82
No_of_seqs 109 out of 857
Neff 6.2
Searched_HMMs 46136
Date Fri Aug 16 16:48:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16910.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16910hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd05172 PIKKc_DNA-PK DNA-depen 100.0 2E-33 4.4E-38 200.7 3.0 75 2-76 130-204 (235)
2 cd05169 PIKKc_TOR TOR (Target 100.0 9.8E-33 2.1E-37 200.1 2.5 73 3-75 176-248 (280)
3 cd05163 TRRAP TRansformation/t 100.0 5.6E-32 1.2E-36 195.0 1.9 74 3-76 149-222 (253)
4 cd05171 PIKKc_ATM Ataxia telan 100.0 6.6E-32 1.4E-36 196.5 1.0 73 3-76 176-248 (279)
5 cd05170 PIKKc_SMG1 Suppressor 100.0 1.6E-31 3.5E-36 196.8 2.5 73 2-75 203-275 (307)
6 cd00892 PIKKc_ATR ATR (Ataxia 100.0 3.5E-31 7.6E-36 189.3 1.3 72 3-75 134-205 (237)
7 cd05164 PIKKc Phosphoinositide 100.0 5.6E-31 1.2E-35 186.6 1.5 73 3-76 126-198 (222)
8 cd00142 PI3Kc_like Phosphoinos 100.0 3.5E-30 7.5E-35 181.5 1.4 72 3-75 123-194 (219)
9 smart00146 PI3Kc Phosphoinosit 100.0 5.1E-30 1.1E-34 178.6 1.4 72 3-75 96-167 (202)
10 cd05168 PI4Kc_III_beta Phospho 99.9 5.3E-29 1.2E-33 183.3 1.7 70 3-74 136-207 (293)
11 cd00893 PI4Kc_III Phosphoinosi 99.9 4.6E-29 1E-33 183.3 0.2 71 3-74 134-206 (289)
12 KOG0890|consensus 99.9 1.7E-28 3.6E-33 210.4 0.6 76 4-80 2215-2291(2382)
13 cd05165 PI3Kc_I Phosphoinositi 99.9 4.4E-28 9.6E-33 182.8 1.7 71 3-74 207-284 (366)
14 cd00891 PI3Kc Phosphoinositide 99.9 6.3E-28 1.4E-32 181.0 1.8 71 3-74 198-271 (352)
15 KOG0892|consensus 99.9 5.1E-28 1.1E-32 208.7 0.2 76 2-78 2619-2695(2806)
16 cd05167 PI4Kc_III_alpha Phosph 99.9 9.6E-28 2.1E-32 177.9 0.4 70 3-73 155-224 (311)
17 cd00894 PI3Kc_IB_gamma Phospho 99.9 7.4E-27 1.6E-31 176.2 4.2 66 3-69 207-273 (365)
18 cd00896 PI3Kc_III Phosphoinosi 99.9 3.9E-27 8.4E-32 176.7 1.4 67 3-74 197-265 (350)
19 PF00454 PI3_PI4_kinase: Phosp 99.9 7.8E-28 1.7E-32 168.4 -3.5 73 3-77 129-205 (235)
20 COG5032 TEL1 Phosphatidylinosi 99.9 4.6E-27 1E-31 203.1 -1.1 78 3-80 1937-2015(2105)
21 cd05173 PI3Kc_IA_beta Phosphoi 99.9 1.6E-26 3.5E-31 174.2 1.4 71 3-74 203-279 (362)
22 cd05174 PI3Kc_IA_delta Phospho 99.9 6.2E-26 1.3E-30 171.0 3.6 62 3-65 203-265 (361)
23 cd05166 PI3Kc_II Phosphoinosit 99.9 1.3E-25 2.8E-30 168.7 3.4 70 3-73 197-271 (353)
24 cd05175 PI3Kc_IA_alpha Phospho 99.9 2.1E-25 4.5E-30 168.4 3.7 62 3-65 206-268 (366)
25 cd05176 PI3Kc_C2_alpha Phospho 99.9 4.4E-25 9.4E-30 166.0 4.7 64 3-67 197-261 (353)
26 cd05177 PI3Kc_C2_gamma Phospho 99.9 3E-25 6.5E-30 166.9 3.7 67 3-70 198-267 (354)
27 cd00895 PI3Kc_C2_beta Phosphoi 99.9 3.4E-24 7.4E-29 161.3 3.7 62 4-66 199-261 (354)
28 KOG0904|consensus 99.8 2.1E-20 4.6E-25 152.0 3.6 64 4-68 919-983 (1076)
29 KOG0903|consensus 99.8 4E-19 8.7E-24 142.9 3.4 64 4-69 691-754 (847)
30 KOG0906|consensus 99.7 1.8E-18 3.9E-23 138.1 6.0 63 3-70 689-751 (843)
31 KOG0891|consensus 99.6 4E-18 8.6E-23 148.5 -3.9 72 3-74 2133-2204(2341)
32 KOG0902|consensus 99.6 7.2E-16 1.6E-20 130.1 4.0 62 4-67 1648-1709(1803)
33 KOG0905|consensus 99.6 7.7E-16 1.7E-20 128.5 3.8 63 4-67 1192-1255(1639)
34 PTZ00303 phosphatidylinositol 99.5 1.7E-14 3.8E-19 117.6 2.9 63 3-67 1140-1202(1374)
35 KOG0889|consensus 98.9 1.1E-10 2.4E-15 104.5 -2.0 74 3-76 3378-3451(3550)
36 cd05145 RIO1_like RIO kinase f 92.6 0.11 2.4E-06 35.0 2.5 25 13-39 142-166 (190)
37 cd05147 RIO1_euk RIO kinase fa 92.4 0.13 2.7E-06 35.2 2.6 26 13-40 142-167 (190)
38 cd05151 ChoK Choline Kinase (C 91.4 0.23 5E-06 31.9 2.9 27 10-38 109-135 (170)
39 cd05144 RIO2_C RIO kinase fami 91.1 0.26 5.7E-06 33.1 3.1 29 13-42 149-177 (198)
40 COG0661 AarF Predicted unusual 91.0 0.2 4.3E-06 40.0 2.7 23 13-36 289-311 (517)
41 TIGR03724 arch_bud32 Kae1-asso 90.7 0.26 5.7E-06 32.7 2.7 23 13-37 114-136 (199)
42 PRK04750 ubiB putative ubiquin 89.7 0.28 6E-06 39.3 2.5 24 13-37 284-311 (537)
43 TIGR01982 UbiB 2-polyprenylphe 89.4 0.32 7E-06 37.5 2.6 24 13-37 281-304 (437)
44 cd05119 RIO RIO kinase family, 89.4 0.37 8E-06 31.6 2.6 27 13-41 139-165 (187)
45 TIGR03843 conserved hypothetic 89.2 0.57 1.2E-05 34.6 3.6 37 6-43 141-177 (253)
46 PRK14879 serine/threonine prot 89.0 0.45 9.8E-06 31.8 2.8 23 13-37 119-141 (211)
47 PF01636 APH: Phosphotransfera 88.9 0.43 9.3E-06 31.5 2.7 31 7-37 165-195 (239)
48 cd05156 ChoK_euk Choline Kinas 88.5 0.62 1.3E-05 33.2 3.4 32 6-37 177-211 (302)
49 PRK10359 lipopolysaccharide co 87.8 0.45 9.7E-06 34.3 2.3 22 13-36 159-180 (232)
50 KOG0616|consensus 87.2 0.43 9.3E-06 36.6 2.0 24 13-37 168-191 (355)
51 smart00090 RIO RIO-like kinase 86.4 0.66 1.4E-05 32.8 2.5 26 13-40 173-198 (237)
52 PRK01723 3-deoxy-D-manno-octul 86.1 0.73 1.6E-05 32.6 2.6 24 13-37 166-189 (239)
53 PF01633 Choline_kinase: Choli 84.7 0.63 1.4E-05 31.7 1.7 30 8-37 143-172 (211)
54 cd05120 APH_ChoK_like Aminogly 84.5 1.2 2.7E-05 26.8 2.8 24 13-37 113-136 (155)
55 PLN02421 phosphotransferase, a 84.4 1.4 3.1E-05 32.5 3.6 35 7-41 181-215 (330)
56 KOG0608|consensus 83.4 0.9 1.9E-05 38.4 2.3 24 13-37 753-776 (1034)
57 cd05157 ETNK_euk Ethanolamine 83.2 2.2 4.7E-05 29.1 3.9 32 7-38 169-200 (235)
58 KOG0984|consensus 82.5 1.1 2.3E-05 33.2 2.2 23 14-37 174-196 (282)
59 cd05154 ACAD10_11_like Acyl-Co 82.0 1.5 3.3E-05 28.9 2.7 31 7-37 173-204 (223)
60 cd05153 HomoserineK_II Homoser 81.8 1.3 2.8E-05 31.3 2.4 29 8-37 175-203 (296)
61 KOG0598|consensus 81.2 0.85 1.8E-05 35.2 1.3 24 13-37 149-172 (357)
62 PRK12274 serine/threonine prot 81.1 1.6 3.5E-05 31.4 2.6 25 13-38 115-140 (218)
63 PF06176 WaaY: Lipopolysacchar 79.8 1.9 4.1E-05 31.3 2.7 22 12-35 158-179 (229)
64 PF01163 RIO1: RIO1 family; I 78.6 2.7 5.8E-05 29.1 3.1 42 13-62 131-172 (188)
65 KOG0658|consensus 78.0 1.7 3.7E-05 33.6 2.1 25 13-37 149-173 (364)
66 cd05122 PKc_STE Catalytic doma 77.9 3 6.6E-05 27.4 3.1 31 10-41 119-149 (253)
67 TIGR02172 Fb_sc_TIGR02172 Fibr 77.7 2.2 4.7E-05 30.0 2.4 25 11-37 156-180 (226)
68 KOG0594|consensus 76.9 1.9 4.1E-05 32.8 2.1 27 13-40 144-170 (323)
69 PLN02236 choline kinase 76.2 4 8.8E-05 30.4 3.6 32 7-38 199-230 (344)
70 PRK10271 thiK thiamine kinase; 76.1 3.2 6.9E-05 29.1 2.9 34 6-41 75-108 (188)
71 cd05587 STKc_cPKC Catalytic do 75.9 1.7 3.8E-05 31.0 1.6 24 13-37 125-148 (324)
72 COG3642 Mn2+-dependent serine/ 75.2 3.3 7.2E-05 29.7 2.8 26 13-40 116-141 (204)
73 cd05594 STKc_PKB_alpha Catalyt 74.9 2.7 5.8E-05 30.0 2.3 24 13-37 120-143 (325)
74 PF01386 Ribosomal_L25p: Ribos 74.6 3.8 8.2E-05 25.0 2.7 15 20-34 74-88 (88)
75 PRK05231 homoserine kinase; Pr 74.5 3.5 7.5E-05 29.6 2.8 26 10-37 189-215 (319)
76 cd05155 APH_ChoK_like_1 Unchar 74.3 3.9 8.4E-05 28.2 3.0 29 7-37 163-192 (235)
77 KOG0603|consensus 74.2 2.8 6E-05 34.5 2.4 29 12-40 438-466 (612)
78 cd07862 STKc_CDK6 Catalytic do 73.9 2 4.2E-05 29.7 1.4 25 13-38 134-158 (290)
79 KOG0983|consensus 73.7 2.8 6E-05 32.3 2.2 24 13-37 216-239 (391)
80 KOG1006|consensus 73.7 2.6 5.7E-05 32.2 2.1 23 14-37 193-215 (361)
81 PF00069 Pkinase: Protein kina 73.4 2.8 6.1E-05 28.1 2.0 25 13-38 122-146 (260)
82 cd05627 STKc_NDR2 Catalytic do 73.1 2.1 4.6E-05 31.1 1.4 25 13-38 125-149 (360)
83 PRK09188 serine/threonine prot 73.1 3.4 7.4E-05 31.5 2.6 25 13-38 135-160 (365)
84 PTZ00426 cAMP-dependent protei 73.1 2 4.4E-05 31.3 1.3 25 13-38 155-179 (340)
85 PRK09605 bifunctional UGMP fam 72.7 2.6 5.6E-05 33.0 1.9 23 13-37 452-474 (535)
86 KOG0592|consensus 72.6 2.7 5.9E-05 34.4 2.0 23 14-37 199-221 (604)
87 cd05590 STKc_nPKC_eta Catalyti 72.4 2.2 4.8E-05 30.5 1.4 24 13-37 120-143 (320)
88 TIGR00938 thrB_alt homoserine 72.0 4.4 9.4E-05 29.1 2.8 29 8-37 187-215 (307)
89 cd05616 STKc_cPKC_beta Catalyt 71.7 2.1 4.6E-05 30.5 1.2 25 13-38 125-149 (323)
90 cd05585 STKc_YPK1_like Catalyt 71.6 2.6 5.5E-05 29.9 1.6 24 13-37 117-140 (312)
91 KOG0610|consensus 71.4 3.4 7.5E-05 32.8 2.3 32 9-41 197-230 (459)
92 cd06640 STKc_MST4 Catalytic do 71.4 3.2 7E-05 28.6 2.0 26 12-38 124-149 (277)
93 cd05598 STKc_LATS Catalytic do 71.3 2.5 5.4E-05 30.8 1.5 24 13-37 125-148 (376)
94 cd05601 STKc_CRIK Catalytic do 71.2 2.5 5.4E-05 30.1 1.4 25 13-38 126-150 (330)
95 cd05603 STKc_SGK2 Catalytic do 70.9 2.2 4.8E-05 30.3 1.1 24 13-37 120-143 (321)
96 cd07871 STKc_PCTAIRE3 Catalyti 70.8 2.3 5E-05 29.7 1.2 26 13-39 127-152 (288)
97 cd05609 STKc_MAST Catalytic do 70.6 3.2 6.8E-05 29.2 1.8 25 12-37 124-148 (305)
98 cd00180 PKc Catalytic domain o 70.3 4.2 9.1E-05 25.5 2.2 29 12-40 115-143 (215)
99 cd05614 STKc_MSK2_N N-terminal 70.1 2.7 5.8E-05 30.0 1.4 24 13-37 129-152 (332)
100 cd05571 STKc_PKB Catalytic dom 70.1 2.9 6.2E-05 29.9 1.5 24 13-37 119-142 (323)
101 cd05575 STKc_SGK Catalytic dom 69.9 2.6 5.7E-05 30.0 1.3 25 13-38 120-144 (323)
102 cd05118 STKc_CMGC Catalytic do 69.9 3.6 7.8E-05 28.0 1.9 29 12-41 121-149 (283)
103 cd05591 STKc_nPKC_epsilon Cata 69.8 2.9 6.3E-05 29.8 1.5 25 13-38 120-144 (321)
104 cd05146 RIO3_euk RIO kinase fa 69.7 4.4 9.5E-05 28.4 2.4 27 13-41 149-175 (197)
105 cd05602 STKc_SGK1 Catalytic do 69.7 2.4 5.2E-05 30.2 1.1 24 13-37 120-143 (325)
106 PHA02882 putative serine/threo 69.5 3.6 7.9E-05 28.9 2.0 24 13-37 150-173 (294)
107 cd05600 STKc_Sid2p_Dbf2p Catal 69.4 2.9 6.3E-05 29.8 1.5 25 13-38 125-149 (333)
108 KOG0612|consensus 69.3 6.2 0.00014 35.0 3.6 56 14-70 200-259 (1317)
109 PF06293 Kdo: Lipopolysacchari 69.2 5.2 0.00011 27.4 2.6 23 13-36 142-167 (206)
110 cd05068 PTKc_Frk_like Catalyti 69.1 4.5 9.7E-05 27.5 2.3 26 13-39 127-152 (261)
111 cd05581 STKc_PDK1 Catalytic do 69.1 2.6 5.6E-05 28.6 1.1 28 12-40 125-152 (280)
112 cd05042 PTKc_Aatyk Catalytic d 69.1 3.3 7.3E-05 28.2 1.7 26 13-39 124-149 (269)
113 cd05612 STKc_PRKX_like Catalyt 69.1 3.2 7E-05 29.0 1.6 25 13-38 125-149 (291)
114 cd05604 STKc_SGK3 Catalytic do 69.1 2.9 6.3E-05 29.8 1.4 24 13-37 120-143 (325)
115 cd05628 STKc_NDR1 Catalytic do 69.1 3 6.4E-05 30.4 1.5 24 13-37 125-148 (363)
116 cd05085 PTKc_Fer Catalytic dom 68.9 3.5 7.7E-05 27.6 1.7 25 13-38 117-141 (250)
117 cd05034 PTKc_Src_like Catalyti 68.4 3.9 8.5E-05 27.6 1.9 27 12-39 126-152 (261)
118 KOG1235|consensus 68.3 5.3 0.00012 32.3 2.8 25 13-37 325-352 (538)
119 cd06642 STKc_STK25-YSK1 Cataly 68.0 4.8 0.0001 27.6 2.3 24 13-37 125-148 (277)
120 cd05592 STKc_nPKC_theta_delta 67.9 2.8 6.2E-05 29.9 1.2 24 13-37 120-143 (316)
121 cd08223 STKc_Nek4 Catalytic do 67.7 5.9 0.00013 26.6 2.6 25 12-37 125-149 (257)
122 cd05150 APH Aminoglycoside 3'- 67.7 6.3 0.00014 27.1 2.8 30 7-37 162-191 (244)
123 cd06625 STKc_MEKK3_like Cataly 67.6 4.3 9.4E-05 27.3 2.0 24 13-37 128-151 (263)
124 PTZ00263 protein kinase A cata 67.6 3.4 7.4E-05 29.6 1.5 27 12-39 141-167 (329)
125 KOG0198|consensus 67.5 6.7 0.00015 29.5 3.1 45 14-58 142-186 (313)
126 cd05573 STKc_ROCK_NDR_like Cat 67.5 3.1 6.7E-05 29.7 1.3 25 13-38 125-149 (350)
127 cd05033 PTKc_EphR Catalytic do 67.4 4.2 9E-05 27.7 1.9 27 13-40 130-156 (266)
128 cd05621 STKc_ROCK2 Catalytic d 67.1 3.7 8.1E-05 30.3 1.7 27 13-40 166-192 (370)
129 cd05083 PTKc_Chk Catalytic dom 67.0 4.4 9.5E-05 27.4 1.9 27 12-39 123-149 (254)
130 cd07872 STKc_PCTAIRE2 Catalyti 67.0 3.1 6.8E-05 29.2 1.2 25 13-38 128-152 (309)
131 cd05039 PTKc_Csk_like Catalyti 66.9 7.3 0.00016 26.2 3.0 27 13-40 126-152 (256)
132 KOG2345|consensus 66.8 5.4 0.00012 30.1 2.5 24 13-37 153-176 (302)
133 cd06613 STKc_MAP4K3_like Catal 66.8 4.5 9.8E-05 27.2 1.9 26 12-38 124-149 (262)
134 cd05626 STKc_LATS2 Catalytic d 66.7 3.5 7.6E-05 30.3 1.5 24 13-37 125-148 (381)
135 cd05593 STKc_PKB_gamma Catalyt 66.7 3.3 7.2E-05 29.8 1.3 24 13-37 119-142 (328)
136 cd05617 STKc_aPKC_zeta Catalyt 66.6 4 8.6E-05 29.3 1.7 25 13-38 120-144 (327)
137 cd05586 STKc_Sck1_like Catalyt 66.6 3.3 7.2E-05 29.5 1.3 24 13-37 120-143 (330)
138 cd07837 STKc_CdkB_plant Cataly 66.6 5 0.00011 27.6 2.2 25 13-37 134-158 (295)
139 PRK15123 lipopolysaccharide co 66.3 6 0.00013 28.8 2.6 25 13-37 162-192 (268)
140 cd07874 STKc_JNK3 Catalytic do 66.2 4.1 8.9E-05 29.4 1.7 26 13-39 143-168 (355)
141 cd05625 STKc_LATS1 Catalytic d 66.0 3.8 8.2E-05 30.0 1.5 24 13-37 125-148 (382)
142 cd08219 STKc_Nek3 Catalytic do 65.9 5.5 0.00012 26.8 2.2 26 13-39 124-149 (255)
143 cd07838 STKc_CDK4_6_like Catal 65.7 7.8 0.00017 26.4 3.0 27 12-39 130-156 (287)
144 cd05596 STKc_ROCK Catalytic do 65.6 4.5 9.7E-05 29.7 1.8 27 13-40 166-192 (370)
145 PRK05943 50S ribosomal protein 65.6 4.5 9.7E-05 25.0 1.6 18 18-35 70-92 (94)
146 TIGR02721 ycfN_thiK thiamine k 65.6 6.3 0.00014 27.4 2.5 32 8-41 146-177 (256)
147 cd05069 PTKc_Yes Catalytic dom 65.5 4.9 0.00011 27.3 1.9 25 13-38 126-150 (260)
148 PLN00009 cyclin-dependent kina 65.3 6.9 0.00015 27.1 2.7 26 13-38 126-151 (294)
149 cd07876 STKc_JNK2 Catalytic do 65.2 3.8 8.3E-05 29.6 1.4 25 13-38 147-171 (359)
150 PLN00034 mitogen-activated pro 65.2 3.5 7.6E-05 29.8 1.2 25 13-38 192-216 (353)
151 cd05041 PTKc_Fes_like Catalyti 65.2 5.5 0.00012 26.7 2.1 27 12-39 116-142 (251)
152 cd05624 STKc_MRCK_beta Catalyt 65.1 4.8 0.0001 28.9 1.9 26 13-39 126-151 (331)
153 cd05615 STKc_cPKC_alpha Cataly 65.1 3.9 8.4E-05 29.3 1.4 25 13-38 125-149 (323)
154 cd05102 PTKc_VEGFR3 Catalytic 65.1 6.4 0.00014 28.0 2.5 24 13-37 198-221 (338)
155 cd06656 STKc_PAK3 Catalytic do 64.9 3.5 7.5E-05 29.0 1.1 26 13-39 139-164 (297)
156 cd05574 STKc_phototropin_like 64.9 4.8 0.0001 28.3 1.8 28 12-40 126-153 (316)
157 TIGR02906 spore_CotS spore coa 64.9 8.1 0.00018 27.3 3.0 29 7-37 186-214 (313)
158 cd05096 PTKc_DDR1 Catalytic do 64.8 4.3 9.4E-05 28.4 1.6 24 13-37 162-185 (304)
159 cd07869 STKc_PFTAIRE1 Catalyti 64.8 3.5 7.6E-05 28.9 1.1 25 13-38 127-151 (303)
160 cd05629 STKc_NDR_like_fungal C 64.7 4.3 9.4E-05 29.6 1.6 24 13-37 125-148 (377)
161 smart00219 TyrKc Tyrosine kina 64.6 5.3 0.00011 26.6 1.9 29 12-41 126-154 (258)
162 cd08530 STKc_CNK2-like Catalyt 64.6 16 0.00034 24.3 4.2 28 12-40 126-153 (256)
163 cd05595 STKc_PKB_beta Catalyti 64.5 3.3 7.1E-05 29.6 0.9 25 13-38 119-143 (323)
164 cd07835 STKc_CDK1_like Catalyt 64.3 4.5 9.8E-05 27.7 1.6 26 12-38 122-147 (283)
165 cd05075 PTKc_Axl Catalytic dom 64.3 4.2 9.2E-05 27.6 1.4 25 13-38 136-160 (272)
166 cd05580 STKc_PKA Catalytic dom 64.2 4.4 9.6E-05 28.1 1.5 27 12-39 124-150 (290)
167 PTZ00267 NIMA-related protein 64.2 4.9 0.00011 30.8 1.9 25 13-38 193-217 (478)
168 cd05620 STKc_nPKC_delta Cataly 64.1 3.4 7.4E-05 29.5 0.9 24 13-37 120-143 (316)
169 cd05072 PTKc_Lyn Catalytic dom 64.0 4.5 9.8E-05 27.4 1.5 26 13-39 127-152 (261)
170 cd06650 PKc_MEK1 Catalytic dom 63.8 6 0.00013 28.5 2.2 25 13-38 128-152 (333)
171 cd07875 STKc_JNK1 Catalytic do 63.8 4.5 9.9E-05 29.3 1.6 26 13-39 150-175 (364)
172 cd05040 PTKc_Ack_like Catalyti 63.8 6 0.00013 26.6 2.1 24 13-37 121-144 (257)
173 KOG0605|consensus 63.5 4.5 9.7E-05 32.9 1.6 23 14-37 266-288 (550)
174 cd06649 PKc_MEK2 Catalytic dom 63.5 5.7 0.00012 28.4 2.0 24 13-37 128-151 (331)
175 cd05059 PTKc_Tec_like Catalyti 63.4 4.4 9.6E-05 27.5 1.4 24 13-37 124-147 (256)
176 cd08217 STKc_Nek2 Catalytic do 63.3 5.2 0.00011 26.7 1.7 27 12-39 133-159 (265)
177 cd07853 STKc_NLK Catalytic dom 63.2 5.1 0.00011 29.2 1.7 25 13-38 127-151 (372)
178 cd05066 PTKc_EphR_A Catalytic 63.2 4.3 9.3E-05 27.7 1.3 26 12-38 129-154 (267)
179 cd05599 STKc_NDR_like Catalyti 63.1 4.4 9.6E-05 29.2 1.4 24 13-37 125-148 (364)
180 cd05084 PTKc_Fes Catalytic dom 63.0 5.6 0.00012 26.8 1.8 25 13-38 118-142 (252)
181 cd05584 STKc_p70S6K Catalytic 63.0 4.5 9.8E-05 28.9 1.4 24 13-37 124-147 (323)
182 cd07861 STKc_CDK1_euk Catalyti 62.9 4.3 9.3E-05 27.8 1.2 25 13-38 125-149 (285)
183 cd07878 STKc_p38beta_MAPK11 Ca 62.9 8.6 0.00019 27.5 2.8 26 13-39 142-167 (343)
184 cd05618 STKc_aPKC_iota Catalyt 62.8 4.8 0.0001 28.9 1.5 25 13-38 120-144 (329)
185 cd06606 STKc_MAPKKK Catalytic 62.5 10 0.00022 25.0 3.0 29 12-41 124-152 (260)
186 cd06624 STKc_ASK Catalytic dom 62.5 5.4 0.00012 27.2 1.7 26 13-38 132-157 (268)
187 cd08529 STKc_FA2-like Catalyti 62.5 8 0.00017 25.8 2.5 25 13-38 125-149 (256)
188 cd00495 Ribosomal_L25_TL5_CTC 62.4 4.3 9.4E-05 24.7 1.1 13 23-35 78-90 (91)
189 KOG0593|consensus 62.2 5.1 0.00011 31.1 1.6 24 13-37 125-148 (396)
190 cd05631 STKc_GRK4 Catalytic do 62.2 5.2 0.00011 27.8 1.6 25 13-38 126-150 (285)
191 cd07863 STKc_CDK4 Catalytic do 62.0 4.5 9.8E-05 27.8 1.2 25 13-38 132-156 (288)
192 cd05052 PTKc_Abl Catalytic dom 61.9 11 0.00025 25.5 3.2 28 13-41 128-155 (263)
193 cd06644 STKc_STK10_LOK Catalyt 61.9 6.7 0.00015 27.2 2.1 26 12-38 133-158 (292)
194 cd07873 STKc_PCTAIRE1 Catalyti 61.9 4.2 9E-05 28.4 1.0 25 13-38 128-152 (301)
195 cd05619 STKc_nPKC_theta Cataly 61.7 4.5 9.7E-05 28.9 1.2 25 13-38 120-144 (316)
196 cd06643 STKc_SLK Catalytic dom 61.7 7.3 0.00016 26.8 2.2 24 13-37 127-150 (282)
197 cd05082 PTKc_Csk Catalytic dom 61.7 6.5 0.00014 26.6 1.9 25 13-38 126-150 (256)
198 cd05048 PTKc_Ror Catalytic Dom 61.7 6.8 0.00015 26.8 2.1 25 13-38 148-172 (283)
199 cd08224 STKc_Nek6_Nek7 Catalyt 61.6 6.6 0.00014 26.4 2.0 25 13-38 130-154 (267)
200 cd07832 STKc_CCRK Catalytic do 61.5 6.1 0.00013 27.0 1.8 28 12-40 122-149 (286)
201 cd06608 STKc_myosinIII_like Ca 61.4 5 0.00011 27.0 1.3 25 13-38 137-161 (275)
202 cd07847 STKc_CDKL1_4 Catalytic 61.3 6.1 0.00013 26.9 1.8 26 13-39 124-149 (286)
203 cd05622 STKc_ROCK1 Catalytic d 61.3 6.2 0.00013 29.1 1.9 26 13-39 166-191 (371)
204 cd06622 PKc_MAPKK_PBS2_like Ca 61.3 8.6 0.00019 26.4 2.5 26 13-39 127-152 (286)
205 cd05123 STKc_AGC Catalytic dom 61.1 9.1 0.0002 25.5 2.6 26 12-38 116-141 (250)
206 cd05152 MPH2' Macrolide 2'-Pho 61.0 8.8 0.00019 27.7 2.6 29 8-37 185-214 (276)
207 PLN03225 Serine/threonine-prot 60.9 6 0.00013 31.5 1.9 25 13-37 279-303 (566)
208 PHA03212 serine/threonine kina 60.8 7 0.00015 29.2 2.2 24 13-37 206-229 (391)
209 cd05097 PTKc_DDR_like Catalyti 60.6 6.2 0.00014 27.4 1.8 25 12-37 152-176 (295)
210 cd07840 STKc_CDK9_like Catalyt 60.5 5.4 0.00012 27.1 1.4 28 12-40 123-150 (287)
211 cd05054 PTKc_VEGFR Catalytic d 60.4 9 0.0002 27.7 2.6 24 13-37 197-220 (337)
212 cd05112 PTKc_Itk Catalytic dom 60.2 7.2 0.00016 26.2 2.0 25 13-38 124-148 (256)
213 cd05588 STKc_aPKC Catalytic do 60.1 4.9 0.00011 28.8 1.2 25 13-38 120-144 (329)
214 cd05038 PTKc_Jak_rpt2 Catalyti 59.9 6.8 0.00015 26.6 1.8 26 12-38 132-157 (284)
215 cd05597 STKc_DMPK_like Catalyt 59.7 6.5 0.00014 28.2 1.8 26 13-39 126-151 (331)
216 cd06637 STKc_TNIK Catalytic do 59.7 4.9 0.00011 27.3 1.1 26 13-39 135-160 (272)
217 cd07834 STKc_MAPK Catalytic do 59.6 5.8 0.00013 28.0 1.5 29 12-41 126-154 (330)
218 cd08228 STKc_Nek6 Catalytic do 59.4 6.1 0.00013 26.7 1.5 26 13-39 130-155 (267)
219 PTZ00036 glycogen synthase kin 59.3 6.4 0.00014 29.9 1.7 26 13-38 194-219 (440)
220 cd05063 PTKc_EphR_A2 Catalytic 59.3 6.3 0.00014 26.7 1.6 26 12-38 130-155 (268)
221 cd00192 PTKc Catalytic domain 59.1 8.2 0.00018 25.6 2.1 27 13-40 129-155 (262)
222 cd05111 PTK_HER3 Pseudokinase 59.1 8 0.00017 26.7 2.1 24 13-37 133-156 (279)
223 cd07841 STKc_CDK7 Catalytic do 59.0 8.6 0.00019 26.6 2.2 28 12-40 125-152 (298)
224 cd05044 PTKc_c-ros Catalytic d 58.8 8.3 0.00018 26.1 2.1 24 13-37 130-158 (269)
225 cd08215 STKc_Nek Catalytic dom 58.8 6.9 0.00015 25.9 1.6 28 12-40 126-153 (258)
226 PHA03207 serine/threonine kina 58.7 5.4 0.00012 29.5 1.2 24 13-37 209-232 (392)
227 cd05088 PTKc_Tie2 Catalytic do 58.7 8.2 0.00018 27.1 2.1 25 13-38 148-172 (303)
228 PF05191 ADK_lid: Adenylate ki 58.7 6 0.00013 20.6 1.0 15 22-36 3-17 (36)
229 cd06655 STKc_PAK2 Catalytic do 58.6 6 0.00013 27.8 1.4 26 12-38 138-163 (296)
230 cd05582 STKc_RSK_N N-terminal 58.5 6.2 0.00013 28.0 1.4 25 13-38 122-146 (318)
231 cd05607 STKc_GRK7 Catalytic do 58.4 9.3 0.0002 26.4 2.3 26 13-39 119-144 (277)
232 cd06623 PKc_MAPKK_plant_like C 58.4 5.7 0.00012 26.6 1.2 27 12-39 123-149 (264)
233 cd06607 STKc_TAO Catalytic dom 58.4 10 0.00022 26.6 2.5 26 12-38 138-163 (307)
234 cd05570 STKc_PKC Catalytic dom 58.3 5.2 0.00011 28.5 1.1 24 13-37 120-143 (318)
235 cd05071 PTKc_Src Catalytic dom 58.1 9 0.0002 26.1 2.2 25 13-38 126-150 (262)
236 cd05116 PTKc_Syk Catalytic dom 58.0 6.7 0.00014 26.6 1.5 25 13-38 119-143 (257)
237 cd05035 PTKc_Axl_like Catalyti 57.8 7.8 0.00017 26.2 1.8 25 13-38 137-161 (273)
238 cd05047 PTKc_Tie Catalytic dom 57.7 8.9 0.00019 26.2 2.1 25 13-38 136-160 (270)
239 cd05583 STKc_MSK_N N-terminal 57.6 7 0.00015 26.9 1.6 24 13-37 129-152 (288)
240 cd05589 STKc_PKN Catalytic dom 57.6 5.4 0.00012 28.4 1.0 25 13-38 125-149 (324)
241 cd05089 PTKc_Tie1 Catalytic do 57.4 10 0.00022 26.4 2.4 25 13-38 143-167 (297)
242 cd05090 PTKc_Ror1 Catalytic do 57.3 8.4 0.00018 26.5 1.9 25 13-38 148-172 (283)
243 cd05578 STKc_Yank1 Catalytic d 57.3 14 0.0003 24.9 3.0 29 12-41 123-151 (258)
244 cd05623 STKc_MRCK_alpha Cataly 57.0 7.1 0.00015 27.9 1.6 25 13-38 126-150 (332)
245 cd05070 PTKc_Fyn_Yrk Catalytic 57.0 11 0.00023 25.6 2.4 26 13-39 126-151 (260)
246 cd07870 STKc_PFTAIRE2 Catalyti 56.9 8.1 0.00018 26.7 1.8 24 13-37 127-150 (291)
247 cd05109 PTKc_HER2 Catalytic do 56.8 8.5 0.00018 26.4 1.9 24 13-37 133-156 (279)
248 KOG3087|consensus 56.6 12 0.00026 27.2 2.7 30 13-42 137-168 (229)
249 cd05079 PTKc_Jak1_rpt2 Catalyt 56.5 7.9 0.00017 26.7 1.7 25 13-38 133-157 (284)
250 cd05062 PTKc_IGF-1R Catalytic 56.5 7.7 0.00017 26.6 1.6 24 13-37 143-166 (277)
251 cd05608 STKc_GRK1 Catalytic do 56.3 7.7 0.00017 26.9 1.6 25 13-38 121-145 (280)
252 cd05579 STKc_MAST_like Catalyt 56.2 8.2 0.00018 25.7 1.7 26 13-39 117-142 (265)
253 KOG0665|consensus 56.2 6.5 0.00014 30.5 1.3 42 10-61 137-180 (369)
254 cd06641 STKc_MST3 Catalytic do 56.0 8.9 0.00019 26.3 1.9 25 12-37 124-148 (277)
255 cd06629 STKc_MAPKKK_Bck1_like 56.0 9.5 0.00021 25.9 2.0 25 13-38 132-156 (272)
256 cd06657 STKc_PAK4 Catalytic do 55.9 6.6 0.00014 27.6 1.2 26 12-38 139-164 (292)
257 cd07859 STKc_TDY_MAPK_plant Ca 55.9 6.4 0.00014 27.7 1.2 25 13-38 127-151 (338)
258 cd06619 PKc_MKK5 Catalytic dom 55.8 7.7 0.00017 26.7 1.6 25 13-38 119-143 (279)
259 cd06605 PKc_MAPKK Catalytic do 55.7 7.9 0.00017 26.1 1.6 25 13-38 125-149 (265)
260 cd07830 STKc_MAK_like Catalyti 55.7 11 0.00025 25.6 2.4 26 12-38 122-147 (283)
261 cd05050 PTKc_Musk Catalytic do 55.7 6.9 0.00015 27.0 1.3 25 13-38 154-178 (288)
262 cd06917 STKc_NAK1_like Catalyt 55.5 8.1 0.00018 26.3 1.6 26 13-39 125-150 (277)
263 cd06638 STKc_myosinIIIA Cataly 55.3 8.4 0.00018 26.4 1.7 26 13-39 148-173 (286)
264 cd05061 PTKc_InsR Catalytic do 55.2 9.4 0.0002 26.4 1.9 24 13-37 143-166 (288)
265 cd05630 STKc_GRK6 Catalytic do 54.8 8.6 0.00019 26.8 1.7 26 13-39 126-151 (285)
266 cd05115 PTKc_Zap-70 Catalytic 54.7 9.5 0.00021 26.0 1.9 24 13-37 119-142 (257)
267 cd05080 PTKc_Tyk2_rpt2 Catalyt 54.7 11 0.00025 25.8 2.3 24 13-37 131-154 (283)
268 cd05633 STKc_GRK3 Catalytic do 54.5 16 0.00034 25.4 3.0 25 13-38 121-145 (279)
269 cd07848 STKc_CDKL5 Catalytic d 54.3 8.3 0.00018 26.5 1.5 26 13-39 124-149 (287)
270 cd07860 STKc_CDK2_3 Catalytic 54.3 8.3 0.00018 26.4 1.5 24 13-37 124-147 (284)
271 KOG0599|consensus 54.2 9.7 0.00021 29.4 1.9 23 14-37 148-170 (411)
272 cd05113 PTKc_Btk_Bmx Catalytic 53.9 10 0.00022 25.8 1.9 24 13-37 124-147 (256)
273 cd05110 PTKc_HER4 Catalytic do 53.9 10 0.00022 26.6 1.9 25 13-38 133-157 (303)
274 cd05101 PTKc_FGFR2 Catalytic d 53.7 10 0.00022 26.4 1.9 25 13-38 161-185 (304)
275 cd06636 STKc_MAP4K4_6 Catalyti 53.5 8.7 0.00019 26.3 1.5 25 13-38 145-169 (282)
276 PF14956 DUF4505: Domain of un 53.5 9.5 0.00021 26.9 1.7 17 15-31 114-130 (183)
277 cd05086 PTKc_Aatyk2 Catalytic 53.2 12 0.00026 25.6 2.2 25 13-38 123-147 (268)
278 cd07850 STKc_JNK Catalytic dom 53.0 7.5 0.00016 28.0 1.1 26 13-39 142-167 (353)
279 cd05093 PTKc_TrkB Catalytic do 53.0 11 0.00024 26.1 2.0 25 13-38 144-168 (288)
280 cd06612 STKc_MST1_2 Catalytic 52.9 12 0.00027 24.9 2.1 27 12-39 122-148 (256)
281 smart00587 CHK ZnF_C4 abd HLH 52.7 15 0.00033 24.9 2.6 30 8-37 120-153 (196)
282 cd07836 STKc_Pho85 Catalytic d 52.7 8.7 0.00019 26.2 1.4 26 12-38 123-148 (284)
283 cd06616 PKc_MKK4 Catalytic dom 52.2 8.9 0.00019 26.4 1.4 24 13-37 132-155 (288)
284 cd07839 STKc_CDK5 Catalytic do 52.2 7.8 0.00017 26.5 1.1 25 13-38 123-147 (284)
285 cd05067 PTKc_Lck_Blk Catalytic 52.0 10 0.00022 25.7 1.6 25 13-38 126-150 (260)
286 PTZ00283 serine/threonine prot 51.9 11 0.00024 29.3 2.0 24 13-37 167-190 (496)
287 cd05098 PTKc_FGFR1 Catalytic d 51.9 8.5 0.00018 27.0 1.3 24 13-37 164-187 (307)
288 cd06639 STKc_myosinIIIB Cataly 51.9 11 0.00023 26.1 1.7 25 13-38 152-176 (291)
289 cd05092 PTKc_TrkA Catalytic do 51.9 10 0.00022 26.2 1.6 24 13-37 146-169 (280)
290 cd07866 STKc_BUR1 Catalytic do 51.6 8 0.00017 26.7 1.1 26 13-39 139-164 (311)
291 cd06627 STKc_Cdc7_like Catalyt 51.6 11 0.00025 24.9 1.8 29 12-41 122-150 (254)
292 cd06646 STKc_MAP4K5 Catalytic 51.6 9.4 0.0002 25.9 1.4 25 13-38 130-154 (267)
293 cd05095 PTKc_DDR2 Catalytic do 51.5 12 0.00026 26.0 2.0 24 13-37 154-177 (296)
294 cd06628 STKc_MAPKKK_Byr2_like 51.4 8.3 0.00018 26.1 1.1 24 13-37 130-153 (267)
295 cd05045 PTKc_RET Catalytic dom 51.4 9.9 0.00022 26.3 1.5 24 13-37 151-174 (290)
296 cd07855 STKc_ERK5 Catalytic do 51.3 8.7 0.00019 27.4 1.3 26 13-39 131-156 (334)
297 cd05094 PTKc_TrkC Catalytic do 51.1 12 0.00025 26.0 1.9 25 13-38 147-171 (291)
298 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 51.0 10 0.00022 26.0 1.5 25 13-38 132-156 (284)
299 cd06631 STKc_YSK4 Catalytic do 51.0 8.6 0.00019 26.0 1.1 26 12-38 125-150 (265)
300 cd07845 STKc_CDK10 Catalytic d 51.0 9.2 0.0002 26.8 1.3 27 13-40 132-158 (309)
301 cd05056 PTKc_FAK Catalytic dom 50.9 15 0.00032 25.0 2.3 26 12-38 130-155 (270)
302 PF07804 HipA_C: HipA-like C-t 50.8 4.8 0.00011 23.7 -0.1 31 5-38 48-78 (79)
303 COG0510 ycfN Thiamine kinase a 50.8 21 0.00045 25.9 3.2 33 8-41 153-185 (269)
304 cd05087 PTKc_Aatyk1_Aatyk3 Cat 50.7 12 0.00026 25.5 1.9 24 13-37 124-147 (269)
305 cd07879 STKc_p38delta_MAPK13 C 50.7 10 0.00022 27.2 1.6 26 13-39 141-166 (342)
306 cd05114 PTKc_Tec_Rlk Catalytic 50.5 12 0.00027 25.2 1.9 25 13-38 124-148 (256)
307 cd08229 STKc_Nek7 Catalytic do 50.5 9.9 0.00021 25.7 1.4 25 13-38 130-154 (267)
308 cd07857 STKc_MPK1 Catalytic do 50.4 8.6 0.00019 27.4 1.1 25 13-38 129-153 (332)
309 PRK11768 serine/threonine prot 50.4 9.6 0.00021 28.0 1.4 28 7-37 195-222 (325)
310 cd06621 PKc_MAPKK_Pek1_like Ca 50.2 25 0.00055 24.2 3.5 26 12-38 128-153 (287)
311 cd05032 PTKc_InsR_like Catalyt 49.9 13 0.00027 25.3 1.8 24 13-37 143-166 (277)
312 cd05632 STKc_GRK5 Catalytic do 49.4 11 0.00023 26.3 1.4 26 13-39 126-151 (285)
313 cd05148 PTKc_Srm_Brk Catalytic 49.4 14 0.0003 24.9 2.0 26 12-38 127-152 (261)
314 cd07865 STKc_CDK9 Catalytic do 49.4 9 0.00019 26.4 1.0 25 13-38 143-167 (310)
315 cd05610 STKc_MASTL Catalytic d 49.3 11 0.00025 30.4 1.8 25 13-38 128-152 (669)
316 cd07849 STKc_ERK1_2_like Catal 49.3 8.8 0.00019 27.4 1.0 26 13-39 130-155 (336)
317 COG3960 Glyoxylate carboligase 49.2 19 0.0004 28.6 2.8 30 7-36 272-305 (592)
318 cd07846 STKc_CDKL2_3 Catalytic 49.2 15 0.00033 25.0 2.2 25 13-38 124-148 (286)
319 cd08528 STKc_Nek10 Catalytic d 49.1 12 0.00026 25.3 1.7 28 12-40 137-164 (269)
320 cd06648 STKc_PAK_II Catalytic 49.1 13 0.00028 25.9 1.8 24 13-37 139-162 (285)
321 cd06658 STKc_PAK5 Catalytic do 49.1 10 0.00022 26.5 1.3 24 13-37 142-165 (292)
322 cd07851 STKc_p38 Catalytic dom 49.0 10 0.00022 27.3 1.3 27 13-40 142-168 (343)
323 KOG0581|consensus 48.9 11 0.00023 29.3 1.5 24 13-37 203-226 (364)
324 cd05106 PTKc_CSF-1R Catalytic 48.8 19 0.0004 26.6 2.7 24 13-37 236-259 (374)
325 cd07867 STKc_CDC2L6 Catalytic 48.8 23 0.00049 24.7 3.0 26 13-38 132-160 (317)
326 KOG0583|consensus 48.7 12 0.00025 28.5 1.6 26 13-38 144-169 (370)
327 cd06618 PKc_MKK7 Catalytic dom 48.5 10 0.00023 26.3 1.3 24 13-37 139-162 (296)
328 cd06609 STKc_MST3_like Catalyt 48.5 10 0.00023 25.8 1.3 24 13-37 122-145 (274)
329 cd05572 STKc_cGK_PKG Catalytic 48.2 13 0.00028 25.1 1.7 27 12-39 116-142 (262)
330 cd05055 PTKc_PDGFR Catalytic d 48.1 12 0.00026 26.3 1.6 25 13-38 165-189 (302)
331 cd05576 STKc_RPK118_like Catal 48.0 12 0.00025 25.3 1.4 24 13-37 109-132 (237)
332 cd06645 STKc_MAP4K3 Catalytic 47.9 12 0.00025 25.4 1.4 26 12-38 129-154 (267)
333 cd05103 PTKc_VEGFR2 Catalytic 47.9 20 0.00044 25.8 2.8 25 13-38 203-227 (343)
334 cd06652 STKc_MEKK2 Catalytic d 47.7 10 0.00022 25.7 1.1 25 13-38 130-154 (265)
335 PHA03209 serine/threonine kina 47.6 11 0.00025 27.3 1.4 24 13-37 181-204 (357)
336 cd05060 PTKc_Syk_like Catalyti 47.4 18 0.00038 24.4 2.3 24 13-37 119-142 (257)
337 cd06617 PKc_MKK3_6 Catalytic d 47.3 13 0.00028 25.3 1.6 24 13-37 128-151 (283)
338 COG0478 RIO-like serine/threon 47.1 20 0.00043 27.2 2.6 44 13-63 226-269 (304)
339 cd06659 STKc_PAK6 Catalytic do 47.1 14 0.00031 25.9 1.8 25 12-37 140-164 (297)
340 COG5072 ALK1 Serine/threonine 47.0 20 0.00043 28.7 2.7 50 13-64 346-407 (488)
341 cd05577 STKc_GRK Catalytic dom 46.7 11 0.00024 25.9 1.1 25 13-38 119-143 (277)
342 cd05613 STKc_MSK1_N N-terminal 46.6 13 0.00028 25.7 1.5 25 13-38 129-153 (290)
343 COG2334 Putative homoserine ki 46.6 18 0.0004 27.2 2.4 25 13-37 202-226 (331)
344 PHA03210 serine/threonine kina 46.6 13 0.00027 28.9 1.6 24 13-37 291-314 (501)
345 cd05057 PTKc_EGFR_like Catalyt 46.4 16 0.00035 25.0 1.9 24 13-37 133-156 (279)
346 smart00220 S_TKc Serine/Threon 46.3 13 0.00029 24.0 1.5 29 12-41 110-138 (244)
347 PHA03211 serine/threonine kina 46.3 11 0.00025 29.2 1.3 24 13-37 284-307 (461)
348 cd05065 PTKc_EphR_B Catalytic 46.1 15 0.00032 25.0 1.7 24 13-37 130-153 (269)
349 cd07852 STKc_MAPK15 Catalytic 46.0 16 0.00034 26.0 1.9 25 13-38 131-155 (337)
350 cd07844 STKc_PCTAIRE_like Cata 46.0 11 0.00025 25.9 1.1 26 13-39 127-152 (291)
351 KOG0696|consensus 45.8 16 0.00035 29.7 2.1 26 13-39 474-499 (683)
352 cd06635 STKc_TAO1 Catalytic do 45.8 19 0.00041 25.4 2.3 25 13-38 149-173 (317)
353 cd05058 PTKc_Met_Ron Catalytic 45.8 17 0.00037 24.4 2.0 25 13-38 122-146 (262)
354 PRK05618 50S ribosomal protein 45.3 17 0.00037 25.4 1.9 31 22-56 81-111 (197)
355 smart00221 STYKc Protein kinas 45.3 17 0.00037 23.4 1.8 28 12-40 121-148 (225)
356 PRK14751 tetracycline resistan 45.1 15 0.00033 18.2 1.2 17 23-39 11-27 (28)
357 TIGR02904 spore_ysxE spore coa 45.0 16 0.00034 26.4 1.8 29 8-37 196-224 (309)
358 cd05611 STKc_Rim15_like Cataly 44.9 14 0.00031 24.8 1.5 25 13-38 121-145 (260)
359 cd06614 STKc_PAK Catalytic dom 44.9 15 0.00032 25.3 1.6 26 12-38 139-164 (286)
360 cd07856 STKc_Sty1_Hog1 Catalyt 44.8 13 0.00029 26.6 1.4 26 13-39 132-157 (328)
361 KOG0670|consensus 44.7 17 0.00037 30.3 2.1 36 13-53 560-595 (752)
362 cd06611 STKc_SLK_like Catalyti 44.7 15 0.00034 25.0 1.6 24 13-37 127-150 (280)
363 cd07842 STKc_CDK8_like Catalyt 44.5 11 0.00023 26.2 0.8 26 12-38 131-160 (316)
364 PTZ00024 cyclin-dependent prot 44.2 12 0.00027 26.5 1.1 25 13-38 143-167 (335)
365 cd07829 STKc_CDK_like Catalyti 44.2 22 0.00048 24.0 2.3 26 13-39 122-147 (282)
366 cd05099 PTKc_FGFR4 Catalytic d 44.0 19 0.0004 25.4 2.0 25 13-38 158-182 (314)
367 cd07880 STKc_p38gamma_MAPK12 C 43.8 17 0.00036 26.2 1.8 25 13-38 142-166 (343)
368 cd05108 PTKc_EGFR Catalytic do 43.8 17 0.00038 25.6 1.8 25 13-38 133-157 (316)
369 cd05051 PTKc_DDR Catalytic dom 43.7 18 0.00039 24.9 1.8 24 13-37 154-177 (296)
370 cd08218 STKc_Nek1 Catalytic do 43.6 19 0.00042 24.1 2.0 25 13-38 125-149 (256)
371 cd06615 PKc_MEK Catalytic doma 43.4 18 0.00038 25.5 1.8 24 13-37 124-147 (308)
372 cd07843 STKc_CDC2L1 Catalytic 43.2 16 0.00035 25.2 1.6 28 12-40 129-156 (293)
373 cd07833 STKc_CDKL Catalytic do 43.1 18 0.00039 24.6 1.8 25 13-38 124-148 (288)
374 cd07868 STKc_CDK8 Catalytic do 42.9 26 0.00056 24.5 2.6 26 13-38 132-160 (317)
375 PHA03390 pk1 serine/threonine- 42.8 21 0.00046 24.5 2.1 26 13-38 133-158 (267)
376 KOG0694|consensus 42.8 15 0.00033 30.7 1.6 23 14-37 493-515 (694)
377 PLN03224 probable serine/threo 42.5 19 0.00042 28.6 2.1 25 13-38 333-357 (507)
378 PF15232 DUF4585: Domain of un 42.3 29 0.00062 21.2 2.3 19 16-34 6-24 (75)
379 cd06654 STKc_PAK1 Catalytic do 42.2 14 0.0003 25.8 1.2 26 12-38 139-164 (296)
380 cd05053 PTKc_FGFR Catalytic do 42.1 19 0.00041 24.8 1.8 25 13-38 156-180 (293)
381 cd07854 STKc_MAPK4_6 Catalytic 41.6 14 0.0003 26.6 1.1 25 13-37 138-162 (342)
382 PRK10593 hypothetical protein; 41.3 25 0.00055 25.5 2.4 26 10-35 195-221 (297)
383 cd07877 STKc_p38alpha_MAPK14 C 41.3 20 0.00043 25.9 1.8 27 13-40 144-170 (345)
384 cd05073 PTKc_Hck Catalytic dom 41.1 22 0.00047 24.1 1.9 26 13-39 126-151 (260)
385 cd07831 STKc_MOK Catalytic dom 41.0 20 0.00044 24.3 1.8 24 13-38 124-147 (282)
386 cd05049 PTKc_Trk Catalytic dom 40.9 22 0.00047 24.2 1.9 24 13-37 146-169 (280)
387 cd07858 STKc_TEY_MAPK_plant Ca 40.9 15 0.00033 26.2 1.2 27 13-40 132-158 (337)
388 cd06610 STKc_OSR1_SPAK Catalyt 40.8 18 0.00039 24.2 1.5 25 12-37 125-149 (267)
389 PF15535 Toxin_57: Putative to 40.6 16 0.00034 22.4 1.0 15 21-35 35-49 (77)
390 cd06653 STKc_MEKK3_like_1 Cata 40.6 14 0.00031 25.1 0.9 24 13-37 130-153 (264)
391 cd05091 PTKc_Ror2 Catalytic do 39.8 21 0.00045 24.4 1.7 24 13-37 148-171 (283)
392 PRK06148 hypothetical protein; 39.7 27 0.00059 30.0 2.7 26 13-38 208-235 (1013)
393 cd05104 PTKc_Kit Catalytic dom 39.6 28 0.00061 25.6 2.4 25 13-38 238-262 (375)
394 cd05605 STKc_GRK4_like Catalyt 39.4 19 0.00041 25.0 1.5 26 13-39 126-151 (285)
395 cd05606 STKc_beta_ARK Catalyti 39.2 16 0.00035 25.2 1.1 25 13-38 121-145 (278)
396 KOG1165|consensus 39.2 34 0.00073 27.1 2.9 25 13-37 148-176 (449)
397 cd06634 STKc_TAO2 Catalytic do 38.8 20 0.00042 25.3 1.5 26 13-39 139-164 (308)
398 cd08220 STKc_Nek8 Catalytic do 38.8 18 0.00039 24.1 1.2 27 12-38 124-150 (256)
399 TIGR01767 MTRK 5-methylthiorib 38.7 24 0.00052 27.3 2.0 29 9-39 193-221 (370)
400 cd06626 STKc_MEKK4 Catalytic d 38.6 18 0.0004 24.2 1.3 27 13-40 123-149 (264)
401 PRK13184 pknD serine/threonine 38.6 27 0.00058 30.2 2.4 25 13-38 137-161 (932)
402 cd06633 STKc_TAO3 Catalytic do 37.7 28 0.0006 24.6 2.1 26 13-39 145-170 (313)
403 KOG0585|consensus 37.7 29 0.00062 28.4 2.3 27 13-40 234-260 (576)
404 cd08216 PK_STRAD Pseudokinase 37.6 35 0.00076 23.8 2.6 25 13-38 125-149 (314)
405 KOG4750|consensus 37.5 13 0.00029 27.5 0.5 12 11-22 195-209 (269)
406 cd05100 PTKc_FGFR3 Catalytic d 37.5 27 0.00059 24.8 2.1 25 13-38 158-182 (334)
407 KOG4714|consensus 37.5 29 0.00063 26.4 2.2 22 14-35 233-254 (319)
408 cd05037 PTK_Jak_rpt1 Pseudokin 37.4 29 0.00062 23.1 2.0 26 13-39 125-157 (259)
409 cd08221 STKc_Nek9 Catalytic do 36.9 29 0.00063 23.2 2.0 27 12-39 124-150 (256)
410 KOG0690|consensus 36.0 19 0.00042 28.5 1.1 24 13-37 292-315 (516)
411 KOG0667|consensus 35.9 26 0.00057 28.8 1.9 25 13-37 313-338 (586)
412 cd06651 STKc_MEKK3 Catalytic d 35.5 21 0.00045 24.2 1.1 24 13-37 130-153 (266)
413 cd06632 STKc_MEKK1_plant Catal 35.5 25 0.00055 23.3 1.5 26 13-39 126-151 (258)
414 cd06630 STKc_MEKK1 Catalytic d 35.2 24 0.00051 23.8 1.4 28 12-39 126-153 (268)
415 KOG0611|consensus 35.0 29 0.00063 28.3 2.0 23 14-37 178-200 (668)
416 PF02958 EcKinase: Ecdysteroid 35.0 23 0.00049 25.0 1.3 29 9-37 216-248 (294)
417 COG4248 Uncharacterized protei 34.9 33 0.00072 28.1 2.3 24 11-35 139-162 (637)
418 KOG1167|consensus 34.9 24 0.00053 27.9 1.5 25 14-38 157-181 (418)
419 cd05074 PTKc_Tyro3 Catalytic d 34.8 28 0.00061 23.5 1.7 24 13-37 137-160 (273)
420 PRK09550 mtnK methylthioribose 34.4 35 0.00076 26.5 2.3 28 9-38 224-251 (401)
421 KOG2464|consensus 34.4 38 0.00083 24.1 2.4 16 11-27 160-175 (246)
422 PRK10345 hypothetical protein; 34.2 34 0.00074 23.8 2.1 24 12-35 128-154 (210)
423 cd07864 STKc_CDK12 Catalytic d 34.2 22 0.00047 24.5 1.1 25 13-38 140-164 (302)
424 TIGR00731 ctc_TL5 ribosomal pr 33.8 27 0.00059 24.0 1.5 37 18-58 66-107 (176)
425 PTZ00284 protein kinase; Provi 33.6 41 0.00089 25.5 2.6 25 13-38 256-296 (467)
426 cd05077 PTK_Jak1_rpt1 Pseudoki 33.3 38 0.00082 23.1 2.2 25 13-38 129-160 (262)
427 KOG1163|consensus 33.0 41 0.00088 25.6 2.4 44 13-60 135-182 (341)
428 cd06620 PKc_MAPKK_Byr1_like Ca 32.9 25 0.00053 24.2 1.2 25 13-38 128-152 (284)
429 KOG4250|consensus 32.9 40 0.00087 28.5 2.5 24 14-37 145-171 (732)
430 cd05036 PTKc_ALK_LTK Catalytic 32.8 35 0.00076 23.3 1.9 25 13-38 140-167 (277)
431 PHA02988 hypothetical protein; 31.1 33 0.00071 24.0 1.6 24 13-37 147-170 (283)
432 PF14531 Kinase-like: Kinase-l 30.8 39 0.00084 25.1 2.0 30 13-43 169-198 (288)
433 cd05064 PTKc_EphR_A10 Catalyti 30.7 32 0.0007 23.4 1.4 24 13-37 131-154 (266)
434 PRK12396 5-methylribose kinase 29.5 38 0.00082 26.6 1.8 24 12-37 231-254 (409)
435 KOG0597|consensus 28.9 37 0.0008 28.7 1.7 49 13-62 124-186 (808)
436 KOG0662|consensus 28.7 46 0.00099 24.4 2.0 24 13-37 125-148 (292)
437 KOG0659|consensus 28.4 47 0.001 25.3 2.1 24 13-37 125-148 (318)
438 cd05105 PTKc_PDGFR_alpha Catal 28.0 54 0.0012 24.7 2.3 24 13-37 261-284 (400)
439 PF14435 SUKH-4: SUKH-4 immuni 27.8 73 0.0016 21.1 2.8 26 11-36 79-105 (179)
440 KOG0986|consensus 27.8 45 0.00097 27.3 2.0 27 13-40 311-337 (591)
441 KOG4645|consensus 27.8 73 0.0016 29.1 3.3 43 14-65 1359-1401(1509)
442 PF11720 Inhibitor_I78: Peptid 27.7 56 0.0012 18.4 1.9 16 19-35 45-60 (60)
443 COG4499 Predicted membrane pro 27.5 65 0.0014 25.6 2.7 27 3-35 103-129 (434)
444 PRK06149 hypothetical protein; 27.1 54 0.0012 28.1 2.4 25 13-37 213-241 (972)
445 COG1871 CheD Chemotaxis protei 27.1 62 0.0013 22.5 2.3 19 12-30 135-153 (164)
446 PF03975 CheD: CheD chemotacti 27.0 53 0.0012 20.8 1.9 21 11-31 84-104 (114)
447 PF03413 PepSY: Peptidase prop 27.0 93 0.002 16.5 2.7 26 6-31 32-62 (64)
448 TIGR03606 non_repeat_PQQ dehyd 26.5 71 0.0015 25.3 2.9 29 7-36 222-250 (454)
449 cd05046 PTK_CCK4 Pseudokinase 26.4 65 0.0014 21.8 2.4 25 13-38 141-165 (275)
450 KOG0582|consensus 26.4 57 0.0012 26.5 2.3 52 14-66 151-209 (516)
451 COG0515 SPS1 Serine/threonine 26.3 44 0.00095 21.7 1.4 25 13-37 125-149 (384)
452 KOG2686|consensus 26.3 82 0.0018 24.5 3.1 29 9-37 213-241 (366)
453 cd08227 PK_STRAD_alpha Pseudok 26.3 54 0.0012 23.2 2.0 24 13-37 125-148 (327)
454 PRK13497 chemoreceptor glutami 26.1 68 0.0015 22.4 2.4 25 11-35 132-156 (184)
455 cd05043 PTK_Ryk Pseudokinase d 26.0 40 0.00086 23.0 1.3 24 13-37 141-164 (280)
456 PF10246 MRP-S35: Mitochondria 25.7 91 0.002 20.2 2.8 42 9-55 16-71 (104)
457 PF08534 Redoxin: Redoxin; In 25.6 77 0.0017 19.8 2.5 21 15-36 114-134 (146)
458 PF12260 PIP49_C: Protein-kina 25.5 68 0.0015 21.9 2.3 38 3-42 77-114 (188)
459 PF11776 DUF3315: Domain of un 25.1 83 0.0018 17.4 2.3 14 19-32 39-52 (52)
460 cd08225 STKc_Nek5 Catalytic do 24.8 41 0.0009 22.3 1.1 25 13-37 125-149 (257)
461 cd05107 PTKc_PDGFR_beta Cataly 24.8 77 0.0017 23.9 2.7 25 13-38 263-287 (401)
462 cd06647 STKc_PAK_I Catalytic d 24.8 46 0.001 23.2 1.4 26 12-38 138-163 (293)
463 smart00135 LY Low-density lipo 24.7 96 0.0021 14.8 3.4 24 13-36 7-30 (43)
464 KOG0578|consensus 24.4 66 0.0014 26.4 2.3 21 16-37 396-416 (550)
465 PF06588 Muskelin_N: Muskelin 24.2 41 0.00088 24.1 1.0 18 10-27 14-31 (199)
466 PRK13488 chemoreceptor glutami 24.1 79 0.0017 21.4 2.4 20 11-30 127-146 (157)
467 PRK13498 chemoreceptor glutami 24.1 79 0.0017 21.7 2.4 20 11-30 135-154 (167)
468 PF14433 SUKH-3: SUKH-3 immuni 23.9 1.5E+02 0.0032 19.0 3.6 26 9-35 95-120 (142)
469 KOG0695|consensus 23.8 51 0.0011 26.3 1.6 26 13-39 375-400 (593)
470 KOG0668|consensus 23.6 58 0.0013 24.7 1.8 24 14-37 157-180 (338)
471 COG3536 Uncharacterized protei 23.5 2E+02 0.0043 19.0 4.1 40 14-67 2-41 (120)
472 COG2139 RPL21A Ribosomal prote 23.5 46 0.001 21.3 1.1 28 16-43 25-52 (98)
473 PLN00181 protein SPA1-RELATED; 23.2 70 0.0015 26.3 2.3 25 13-38 104-128 (793)
474 PRK13493 chemoreceptor glutami 23.1 83 0.0018 22.5 2.4 21 11-31 159-179 (213)
475 PF11094 UL11: Membrane-associ 21.7 92 0.002 16.7 1.9 17 17-34 14-30 (39)
476 PF01436 NHL: NHL repeat; Int 21.7 98 0.0021 14.5 1.9 20 15-35 2-21 (28)
477 KOG3078|consensus 21.6 38 0.00082 24.7 0.5 15 22-36 140-154 (235)
478 PRK13490 chemoreceptor glutami 21.5 96 0.0021 21.1 2.4 20 11-30 132-151 (162)
479 KOG1166|consensus 21.0 1.1E+02 0.0024 26.7 3.2 29 13-41 818-852 (974)
480 PF07995 GSDH: Glucose / Sorbo 20.9 83 0.0018 23.2 2.2 30 7-36 173-202 (331)
481 cd03014 PRX_Atyp2cys Peroxired 20.7 99 0.0021 19.2 2.3 22 16-38 110-131 (143)
482 cd03012 TlpA_like_DipZ_like Tl 20.7 90 0.002 19.2 2.0 20 16-36 106-125 (126)
483 PF02201 SWIB: SWIB/MDM2 domai 20.6 41 0.0009 19.7 0.4 16 52-67 4-19 (76)
484 PRK13487 chemoreceptor glutami 20.4 1E+02 0.0022 21.9 2.4 20 11-30 147-166 (201)
485 PRK13489 chemoreceptor glutami 20.2 1E+02 0.0022 22.5 2.4 21 11-31 145-165 (233)
486 KOG0614|consensus 20.2 59 0.0013 27.2 1.3 24 13-37 544-567 (732)
No 1
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=99.97 E-value=2e-33 Score=200.73 Aligned_cols=75 Identities=51% Similarity=0.747 Sum_probs=71.0
Q ss_pred ccceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeeeE
Q psy16910 2 NNSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSSE 76 (82)
Q Consensus 2 ~~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~~ 76 (82)
..|++||++|||||||+|||+++.||+++|||||++|+.+++.+++||.|||||||||+++||+.|+||.|++++
T Consensus 130 ~~S~~~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~~~~~~~~~pE~vPFRLT~~~~~~~g~~g~~G~f~~~~ 204 (235)
T cd05172 130 AMCVSHWILGIGDRHLSNFLVDLETGGLVGIDFGHAFGTATQFLPIPELMPFRLTPQFVNLMEPMKADGLLRSCM 204 (235)
T ss_pred HHHHHhheeeccCCCcccEEEECCCCcEEEEeeHhhhccCCccCCCCCCCCeeeCHHHHHHhCCCCCCChHHHHH
Confidence 368999999999999999999999999999999999999988889999999999999999999999999998643
No 2
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=99.97 E-value=9.8e-33 Score=200.08 Aligned_cols=73 Identities=32% Similarity=0.442 Sum_probs=69.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSS 75 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~ 75 (82)
.|++|||+|||||||+|||+|+.||+++|||||++|++++...++||.|||||||||+++||+.|+||.|+.+
T Consensus 176 ~Sv~~YilglgDRH~~NIll~~~tG~v~HIDfg~~f~~~~~~~~~pE~VPFRLT~~~~~~lG~~g~~G~F~~~ 248 (280)
T cd05169 176 MSMVGYILGLGDRHPSNIMIDRLTGKVIHIDFGDCFEVAMHREKFPEKVPFRLTRMLVNALGVSGIEGTFRTT 248 (280)
T ss_pred HHHHHhheeccCCCcceEEEEcCCCCEEEEecHHHHhhccccCCCCCcCCcccCHHHHHHhCCCCCCCchHHH
Confidence 5899999999999999999999999999999999999997667889999999999999999999999999854
No 3
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=99.97 E-value=5.6e-32 Score=195.00 Aligned_cols=74 Identities=28% Similarity=0.341 Sum_probs=70.3
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeeeE
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSSE 76 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~~ 76 (82)
.|+++||+|+|||||+|||+++.||+++||||+++|+++...++.||.|||||||||+++||+.|+||.|++++
T Consensus 149 ~s~~gYilglgdRh~~nili~~~tG~v~hiDf~~~f~~~~~~~~~pE~VPFRLT~ni~~~~g~~g~eG~f~~~~ 222 (253)
T cd05163 149 LSFMTYILSINNRNPDKIFISRDTGNVYQSDLLPSINNNKPLFHNNEPVPFRLTPNIQHLIGPIGLEGILTSSM 222 (253)
T ss_pred HHHHHHHhcCCCCCchhEEEEcCCCcEEEEeeeeeecCCCcCCCCCCcCCcccCHHHHHHhCCcCcCCcHHHHH
Confidence 58999999999999999999999999999999999999987778999999999999999999999999998654
No 4
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=99.97 E-value=6.6e-32 Score=196.46 Aligned_cols=73 Identities=36% Similarity=0.485 Sum_probs=69.3
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeeeE
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSSE 76 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~~ 76 (82)
.|++|||+|||||||+|||+++.||+++||||+++|+++++ ++.||.|||||||||+++||+.|+||.|+.++
T Consensus 176 ~s~~~yilglgDRh~~NIll~~~tG~v~hiDf~~~f~~~~~-l~~pe~vPFRLT~~~~~~lg~~g~~g~f~~~~ 248 (279)
T cd05171 176 SSIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFEQGKI-LPVPETVPFRLTRDIVDGMGITGVEGVFRRCC 248 (279)
T ss_pred HHHHHHhhccCCCCcccEEEEcCcCcEEEEechhhhccCcC-CCCCCcCChhhhHHHHHHhCCCCCcchHHHHH
Confidence 58999999999999999999999999999999999999976 89999999999999999999999999998543
No 5
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=99.97 E-value=1.6e-31 Score=196.78 Aligned_cols=73 Identities=37% Similarity=0.477 Sum_probs=68.9
Q ss_pred ccceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeee
Q psy16910 2 NNSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSS 75 (82)
Q Consensus 2 ~~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~ 75 (82)
..|+++||+|||||||+||||++.||+++|||||++|++++ .+++||.|||||||||+++||+.|+||.|+.+
T Consensus 203 ~~s~~~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~~~~-~l~~pE~VPFRLT~~~~~~lg~~g~~G~f~~~ 275 (307)
T cd05170 203 VMSMIGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFEKGK-SLRIPEKVPFRMTQNIETALGLTGVEGVFRLS 275 (307)
T ss_pred HHHHHHHHccCCCCCCccEEEEcCCCcEEEEeeHhhhcccC-CCCCCCCCCeeeCHHHHHHhCCCCCchhHHHH
Confidence 36899999999999999999999999999999999999985 58899999999999999999999999999854
No 6
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=99.96 E-value=3.5e-31 Score=189.26 Aligned_cols=72 Identities=33% Similarity=0.470 Sum_probs=67.9
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSS 75 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~ 75 (82)
.|+++||+|||||||+|||+++.||+++|||||++|+.++ .++.||.|||||||||++++|+.|++|.|+.+
T Consensus 134 ~s~~~YilgigDRh~~NIli~~~tG~~~HIDfg~~~~~~~-~~~~pe~vPFRLT~~~~~~lg~~g~~g~F~~~ 205 (237)
T cd00892 134 MSMVGYILGLGDRHGENILFDSNTGDVVHVDFNCLFDKGE-TLEVPERVPFRLTQNMVDAMGVLGVEGLFRKS 205 (237)
T ss_pred HHHHHHHhccCCCCcccEEEEcCCCcEEEEehHhhhcccc-cCCCCCCCCcccCHHHHHHhCCCCCCCchHHH
Confidence 5899999999999999999998899999999999999984 57899999999999999999999999999753
No 7
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=99.96 E-value=5.6e-31 Score=186.59 Aligned_cols=73 Identities=38% Similarity=0.551 Sum_probs=68.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeeeE
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSSE 76 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~~ 76 (82)
.|+++|++|+|||||+|||+++.||+++||||+++|+.++ .++.||.|||||||||+++||+.|++|.|+.++
T Consensus 126 ~s~~~YvlglgDRh~~NIli~~~tG~v~hIDf~~~~~~~~-~~~~~e~vPFRLT~~~~~~lg~~g~~G~f~~~~ 198 (222)
T cd05164 126 MSIVGYILGLGDRHLDNILIDRETGEVVHIDFGCIFEKGK-TLPVPELVPFRLTRNIINGMGITGVEGLFRKIC 198 (222)
T ss_pred HHHHHHHhccCCCCCceEEEECCCCcEEEEccHHhhccCC-CCCCCCCCCEEeCHHHHHHhCCCCcCChHHHHH
Confidence 5899999999999999999999999999999999999986 467799999999999999999999999998543
No 8
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=99.96 E-value=3.5e-30 Score=181.49 Aligned_cols=72 Identities=35% Similarity=0.482 Sum_probs=67.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSS 75 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~ 75 (82)
.|+++|++|||||||+|||+++.||+++|||||++|+.+++... +|.|||||||||+++||+.|.+|.|+.+
T Consensus 123 ~s~~~YilglgDRh~~NIli~~~~G~~~hIDfg~~~~~~~~~~~-~e~vPFRLT~~~~~~~g~~~~~g~F~~~ 194 (219)
T cd00142 123 YSVAGYILGIGDRHPDNIMIDLDTGKLFHIDFGFIFGKRKKFLG-RERVPFRLTPDLVNALGTGGVFGPFRSL 194 (219)
T ss_pred HHHHHHHhccCCCCCccEEEECCCCeEEEEeeHHhhCcCcCCCC-CCCCCEeccHHHHHHhCCcchhhhHHHH
Confidence 58999999999999999999988999999999999999976544 9999999999999999999999999854
No 9
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=99.95 E-value=5.1e-30 Score=178.65 Aligned_cols=72 Identities=36% Similarity=0.568 Sum_probs=67.5
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSS 75 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~ 75 (82)
.|+++|++|+|||||+||||+ +||+++|||||++|+++++....+|.|||||||||+++||+.|.+|.|+..
T Consensus 96 ~s~~~YilglgDRh~~NIli~-~~G~v~hIDfg~~~~~~~~~~~~~e~vPFRLT~~~~~~lg~~~~~g~F~~~ 167 (202)
T smart00146 96 YSVITYILGLGDRHNDNIMLD-KTGHLFHIDFGFILGNGPKLFGFPERVPFRLTPEMVDVMGDSGYFGLFRSL 167 (202)
T ss_pred HHHHHHHhcCCCCCCCcEEEe-CCCCEEEEechhhhCccccCCCCCCCCCeecCHHHHHHhCCCcccchHHHH
Confidence 589999999999999999999 899999999999999998766666999999999999999999999999753
No 10
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=99.95 E-value=5.3e-29 Score=183.26 Aligned_cols=70 Identities=27% Similarity=0.311 Sum_probs=64.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCc--hheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQ--EVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~e--G~f~~ 74 (82)
.|++||||||||||++||||++ +|+++|||||++|+.+++. ..+|+||||||++|+++||+.+++ |.|+.
T Consensus 136 ySvv~YvLGigDRH~~NILi~~-~G~liHIDFG~~fg~~~~~-~~~E~vPFrLT~~mv~~mGg~~s~~~~~F~~ 207 (293)
T cd05168 136 YSLICYLLQIKDRHNGNILIDN-DGHIIHIDFGFMLSNSPGN-VGFETAPFKLTQEYIEVMGGVNSDLFNYFKK 207 (293)
T ss_pred HHHHHHHhhccccCCCceEEcC-CCCEEEEehHHhhcccccC-CCCCCCCEEecHHHHHHhCCCCCchhHHHHH
Confidence 5899999999999999999995 9999999999999999765 457999999999999999999987 77864
No 11
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=99.94 E-value=4.6e-29 Score=183.28 Aligned_cols=71 Identities=24% Similarity=0.211 Sum_probs=63.5
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCc--hheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQ--EVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~e--G~f~~ 74 (82)
-|++||||||||||++||||+ .+|+++|||||++|+.+++....+|.+|||||++|+++||+.+.+ +.|+.
T Consensus 134 ySvv~YiLgigDRH~~NILid-~~G~liHIDFG~ilg~~p~~~~~~E~~PFrLT~emv~~mGg~~s~~f~~F~~ 206 (289)
T cd00893 134 YSLLCYLLQIKDRHNGNILLD-SDGHIIHIDFGFILDSSPGNNLGFEPAAFKFTKEMVDFMGGKKSDDFKKFRY 206 (289)
T ss_pred HHHHHHHhhccccCCCceEEC-CCCCEEEEehHHhhCcCCcCCCCCCCCCeeecHHHHHHhCCCCChhHHHHHH
Confidence 489999999999999999998 599999999999999997653447999999999999999999988 45653
No 12
>KOG0890|consensus
Probab=99.94 E-value=1.7e-28 Score=210.40 Aligned_cols=76 Identities=36% Similarity=0.593 Sum_probs=72.3
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchhee-eeEEeee
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVAL-SSEVGFQ 80 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~-~~~~~~q 80 (82)
||+|||||+||||.+|||+|..||+++|+||...|+++ +.+++||.||||||+||+++|||+|+||.|| +||+++.
T Consensus 2215 SmVGyIlGLGDRHgENILFDs~TGdcVHVDFnCLFnKG-etlevPEiVPFRLT~NMidamGp~G~EG~Frk~cEiTLr 2291 (2382)
T KOG0890|consen 2215 SMVGYILGLGDRHGENILFDSTTGDCVHVDFNCLFNKG-ETLEVPELVPFRLTQNMIDAMGPLGLEGSFRKVCEITLR 2291 (2382)
T ss_pred HHHHHHhcCccccccceeeecCCCcEEEEeecccccCC-cccCCCCccceecchhHHhhcCCcccchhHHHHHHHHHH
Confidence 89999999999999999999999999999999999999 5799999999999999999999999999997 6888764
No 13
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P
Probab=99.94 E-value=4.4e-28 Score=182.84 Aligned_cols=71 Identities=31% Similarity=0.397 Sum_probs=64.2
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCC-CCCCceeecHHHHHhhCCCCCc------hheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFRLTPHILAVNEPYGSQ------EVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~-~E~vPFRLT~~~~~~~g~~g~e------G~f~~ 74 (82)
-|++||+|||||||++||||+ .+|+++|||||++|+..++.+++ ||+||||||++|+++||+.|.+ |.|+.
T Consensus 207 ysvvtYiLGigDRH~~NILi~-~~G~l~HIDFG~ilg~~~~~~~i~~E~~PFkLT~emv~~mg~~~~~~~s~~f~~F~~ 284 (366)
T cd05165 207 YCVATFVLGIGDRHNDNIMVK-ETGQLFHIDFGHILGNYKSKFGINRERVPFVLTPDFVHVIGRGKKDNTSEHFQRFQD 284 (366)
T ss_pred HHHHHHHhhccccCCcceEEc-CCCCEEEEehHHhhccCCccCCCCCCCCCeeecHHHHHHhcccCCcCCChhhhHHHH
Confidence 489999999999999999998 69999999999999998877775 9999999999999999987665 67764
No 14
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=99.94 E-value=6.3e-28 Score=181.03 Aligned_cols=71 Identities=31% Similarity=0.358 Sum_probs=64.6
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCCCCCc--hheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEPYGSQ--EVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~~g~e--G~f~~ 74 (82)
-|++||+|||||||++||||+ .+|+++|||||++|+..++.+. .||+||||||++|+++||+.|++ |.|+.
T Consensus 198 ysv~~YiLgigDRH~~NILi~-~~G~~~HIDFG~ilg~~~~~~~~~~E~~PFrLT~~mv~~mGg~~s~~~~~F~~ 271 (352)
T cd00891 198 YCVATYVLGIGDRHNDNIMLT-KTGHLFHIDFGHFLGNFKKKFGIKRERAPFVLTPDMAYVMGGGDSEKFQRFED 271 (352)
T ss_pred HHHHHHHccccccCCCceEEC-CCCCEEEEehHHhhccCCccCCCCCCCCCeeecHHHHHHhCCCCCcccchHHH
Confidence 489999999999999999998 7999999999999998876666 49999999999999999999976 77763
No 15
>KOG0892|consensus
Probab=99.93 E-value=5.1e-28 Score=208.65 Aligned_cols=76 Identities=33% Similarity=0.484 Sum_probs=71.3
Q ss_pred ccceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchhee-eeEEe
Q psy16910 2 NNSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVAL-SSEVG 78 (82)
Q Consensus 2 ~~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~-~~~~~ 78 (82)
.+||+|||||+||||.+|||||..||+++|||+|-+|+.+ +.++.||.|||||||++++.||-+|+||+|| ||+.+
T Consensus 2619 ~sS~VGyILGLGDRH~qNILid~~taEviHIDlGiAFEQG-kilptPE~VPFRLTRDiVdgmGItGveGvFrRccE~t 2695 (2806)
T KOG0892|consen 2619 ASSMVGYILGLGDRHGQNILIDQQTAEVIHIDLGIAFEQG-KILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEFT 2695 (2806)
T ss_pred HHHHHHHHhcccchhhhheeecccccceEEEeeeeehhcC-CcCCCCCcccceeehhhccccCccCchHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999 5799999999999999999999999999997 56543
No 16
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole
Probab=99.93 E-value=9.6e-28 Score=177.86 Aligned_cols=70 Identities=24% Similarity=0.289 Sum_probs=62.0
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchhee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVAL 73 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~ 73 (82)
-|++||+|||||||++||||+ .+|+++|||||++|+.+++....+|++|||||++|+++||+.+.++.|+
T Consensus 155 ysv~tYiLgigDRHn~NILid-~~G~l~HIDFG~il~~~p~~~~~~E~~PFkLT~emv~~mGg~~~s~~f~ 224 (311)
T cd05167 155 YSLISYLLQIKDRHNGNIMID-DDGHIIHIDFGFIFEISPGGNLKFESAPFKLTKEMVQIMGGSMEATPFK 224 (311)
T ss_pred HHHHHHHhhccccCccceEEc-CCCCEEEEeeHHhhccCCCCCCCcCCCCEeecHHHHHHhCCCCcchhHH
Confidence 489999999999999999999 5999999999999999875423479999999999999999999666553
No 17
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=99.93 E-value=7.4e-27 Score=176.18 Aligned_cols=66 Identities=36% Similarity=0.546 Sum_probs=60.3
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCC-CCCCceeecHHHHHhhCCCCCc
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFRLTPHILAVNEPYGSQ 69 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~-~E~vPFRLT~~~~~~~g~~g~e 69 (82)
-|++||||||||||++||||+ .+|+++|||||++|+..++.+.+ +|++|||||++|+++||+.|.+
T Consensus 207 YsV~tYiLGIgDRHndNImi~-~~G~lfHIDFG~ilg~~~~~~gi~~E~~PFkLT~e~v~vmg~~gg~ 273 (365)
T cd00894 207 YCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKK 273 (365)
T ss_pred HHHHHHhccccCccccceeEc-CCCCEEEEeeHHhhCCCCccCCCCCCCCCeeecHHHHHHhCccCCc
Confidence 489999999999999999998 79999999999999998766654 9999999999999999987655
No 18
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin
Probab=99.93 E-value=3.9e-27 Score=176.73 Aligned_cols=67 Identities=30% Similarity=0.460 Sum_probs=61.8
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCch--heee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQE--VALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG--~f~~ 74 (82)
-|++||+|||||||++||||+ .+|+++|||||++|+.+++ |+.||||||++|+++||+.+++| .|+.
T Consensus 197 ysvv~YiLGigDRH~~NILi~-~~G~~~HIDFG~ilg~~p~----~~~~PFrLT~~mv~~mGg~~s~~~~~F~~ 265 (350)
T cd00896 197 YCVITYILGVGDRHLDNLLLT-KDGKLFHIDFGYILGRDPK----PFPPPMKLCKEMVEAMGGAQSEGYQEFKS 265 (350)
T ss_pred HHHHHHHhcccccCCCcEEEc-CCCCEEEEEhHHhhCCCCC----CCCCCeeccHHHHHHhCCCCCcchHHHHH
Confidence 489999999999999999998 7999999999999999864 67799999999999999999999 6763
No 19
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....
Probab=99.92 E-value=7.8e-28 Score=168.45 Aligned_cols=73 Identities=41% Similarity=0.640 Sum_probs=59.2
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhh----CCCCCchheeeeEE
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVN----EPYGSQEVALSSEV 77 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~----g~~g~eG~f~~~~~ 77 (82)
.|+++|++|+|||||+|||++..||+++|||||++|+ . +..+.+|.||||||++|+++| ++.|.+|.|+.++.
T Consensus 129 ~si~~yilg~gDRh~~Nili~~~~g~~~hIDfg~~f~-~-~~~~~~e~vPFrLT~~~~~~~~~~l~~~~~~g~f~~~~~ 205 (235)
T PF00454_consen 129 YSILDYILGLGDRHPGNILIDKKTGELIHIDFGFIFG-G-KHLPVPETVPFRLTRNMVNAMGGYLGPSGVEGLFRSSCE 205 (235)
T ss_dssp HHHHHHHHT-CS--TTTEEE-ETTSEEEE--HSSCTT-H-HHGSSSS--SSTTHHHHHHHTTTSSSTSHHHHHHHHHHH
T ss_pred HhhceEEEeecCCCchhheeccccceeeeEEeHHhhh-c-cccCCCCCCCeEeCHHHHHHHhccCCCchhHhHHHHHHH
Confidence 5899999999999999999999999999999999999 3 456889999999999999999 99999999986543
No 20
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]
Probab=99.92 E-value=4.6e-27 Score=203.09 Aligned_cols=78 Identities=32% Similarity=0.492 Sum_probs=72.8
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheee-eEEeee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALS-SEVGFQ 80 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~-~~~~~q 80 (82)
.|++||+||+|||||+|||+|+.||+++|||||++++..++.++.||.||||||++++++||+.|.||.|+. |+.+++
T Consensus 1937 ySvigYiLglgDRH~~NIliD~~sG~viHiDFg~il~~~p~~~~~pE~vPFrLT~~iv~~mg~~g~EG~Fr~~c~~~~~ 2015 (2105)
T COG5032 1937 YSVIGYILGLGDRHPGNILIDRSSGHVIHIDFGFILFNAPGRFPFPEKVPFRLTRNIVEAMGVSGVEGSFRELCETAFR 2015 (2105)
T ss_pred HHHHHHHccCCCcCCceEEEEcCCCcEEEehHHHHHhcCCCCCCCcccCcHhhhHHHHHhcCccchhhHHHHHHHHHHH
Confidence 589999999999999999999889999999999999999999999999999999999999999999999984 555544
No 21
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de
Probab=99.92 E-value=1.6e-26 Score=174.21 Aligned_cols=71 Identities=30% Similarity=0.341 Sum_probs=60.5
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhC-C-CC---Cchheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNE-P-YG---SQEVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g-~-~g---~eG~f~~ 74 (82)
-|++||||||||||++||||+ .+|+++|||||++|+..++.+. .||+||||||++|+++|| + .| .+|.|+.
T Consensus 203 YsvvtYILGIGDRHn~NILi~-~~G~l~HIDFG~ilg~~~~~~~~~~E~vPFkLT~emv~vm~~G~~g~s~~~~~F~~ 279 (362)
T cd05173 203 YCVATYVLGIGDRHSDNIMVR-KNGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQ 279 (362)
T ss_pred HHHHHHHhhccccCCCceEEC-CCCCEEEEehHHhhccCCcccCCCCCCCCeeecHHHHHHHhcCCCCCCcchhHHHH
Confidence 489999999999999999998 7999999999999998765554 489999999999999996 2 23 3566763
No 22
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=99.92 E-value=6.2e-26 Score=170.99 Aligned_cols=62 Identities=29% Similarity=0.401 Sum_probs=56.6
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCC
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEP 65 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~ 65 (82)
-|++||||||||||++||||+ .+|+++|||||++|+..++.+. .||+||||||++|+++||.
T Consensus 203 ysVvtYiLGIGDRHn~NILi~-~~G~l~HIDFG~ilg~~~~~~~~~~E~vPFkLT~e~v~vmg~ 265 (361)
T cd05174 203 YCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQ 265 (361)
T ss_pred HHHHHHHhcccCcCccceeEc-CCCCEEEEehHHhhcCCcccCCCCCCCCCeeccHHHHHHHcc
Confidence 489999999999999999997 7999999999999998766554 4899999999999999974
No 23
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any
Probab=99.91 E-value=1.3e-25 Score=168.74 Aligned_cols=70 Identities=24% Similarity=0.259 Sum_probs=60.5
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCCCC----Cchhee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEPYG----SQEVAL 73 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~~g----~eG~f~ 73 (82)
-|++||||||||||++||||+ .+|+++|||||++|+..++... .+|+||||||++|+++||+.| ..+.|+
T Consensus 197 ysvv~YiLgigDRH~~NILl~-~~G~l~HIDFG~~lg~~~~~~~~~~E~~PFrLT~emv~~~ggg~~~s~~~~~F~ 271 (353)
T cd05166 197 CCVATYVLGICDRHNDNIMLT-KSGHMFHIDFGKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFV 271 (353)
T ss_pred HHHHHHHhhccccCCCceEEC-CCCCEEEEeeHHhcccccccccCCCCCCCccccHHHHHHhcCCCCCcchHhHHH
Confidence 489999999999999999998 7999999999999999875544 389999999999999998653 234565
No 24
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=99.91 E-value=2.1e-25 Score=168.37 Aligned_cols=62 Identities=31% Similarity=0.383 Sum_probs=57.2
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCC
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEP 65 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~ 65 (82)
-|++||||||||||++||||+ .+|+++|||||++|+.+++.+. .||++|||||++|+.+||+
T Consensus 206 YsV~tYiLGIgDRHndNImi~-~~G~l~HIDFG~iLg~~p~~~~~~~E~~PFkLT~emv~v~~g 268 (366)
T cd05175 206 YCVATFILGIGDRHNSNIMVK-DDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISK 268 (366)
T ss_pred HHHHHHHhcccccCccceeEc-CCCCEEEEehHHhhcCCCccCCCCCCCCCeEecHHHHHHhcc
Confidence 489999999999999999998 7999999999999999987664 5999999999999999974
No 25
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=99.91 E-value=4.4e-25 Score=166.02 Aligned_cols=64 Identities=28% Similarity=0.303 Sum_probs=57.4
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCCCC
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEPYG 67 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~~g 67 (82)
-|++||+|||||||++||||+ .+|+++|||||++|+.+++... .+|++|||||++|+++||+..
T Consensus 197 Ysv~tYiLGIgDRHn~NILi~-~~Ghl~HIDFG~ilg~~~~~g~~~~e~~PFkLT~emv~~mgG~~ 261 (353)
T cd05176 197 CCVATYVLGICDRHNDNIMLR-STGHMFHIDFGKFLGHAQMFGSFKRDRAPFVLTSDMAYVINGGE 261 (353)
T ss_pred HHHHhhhccccCcCCcceEEc-CCCCEEEEeeHHhcCCCccccCCCCCCCCeeecHHHHHHhcCCC
Confidence 489999999999999999997 8999999999999999875443 389999999999999998644
No 26
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=99.91 E-value=3e-25 Score=166.93 Aligned_cols=67 Identities=24% Similarity=0.319 Sum_probs=57.8
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCC-CCCCceeecHHHHHhh--CCCCCch
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFRLTPHILAVN--EPYGSQE 70 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~-~E~vPFRLT~~~~~~~--g~~g~eG 70 (82)
-|++||||||||||++||||+ .+|+++|||||++|+.+++...+ +|++|||||++|+.++ |+.+.++
T Consensus 198 ysvvtYiLGigDRHn~NILi~-~~G~~~HIDFG~ilg~~~~~~~~~~E~~PF~LT~emv~~~~~GG~~s~~ 267 (354)
T cd05177 198 WCVVTFILGVCDRHNDNIMLT-HSGHMFHIDFGKFLGHAQTFGSIKRDRAPFIFTSEMEYFITEGGKKPQR 267 (354)
T ss_pred HHHHHHHhcccCcCCCceeEc-CCCCEEEEehHHhcCCCccccCCCcCCCCeeccHHHHHHhcCCCCCchh
Confidence 489999999999999999998 89999999999999999765443 8999999999999876 4444444
No 27
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not
Probab=99.89 E-value=3.4e-24 Score=161.25 Aligned_cols=62 Identities=27% Similarity=0.307 Sum_probs=55.9
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCC-CCCCCceeecHHHHHhhCCC
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLP-IPELMPFRLTPHILAVNEPY 66 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~-~~E~vPFRLT~~~~~~~g~~ 66 (82)
|++||+|||||||++||||+ .+|+++|||||++|+..++... .+|++||+||++|+++||+-
T Consensus 199 sV~tYiLgIgDRHndNImi~-~~GhlfHIDFG~iLg~~~~~g~~~re~~PF~Lt~emv~vm~gg 261 (354)
T cd00895 199 CVATYVLGICDRHNDNIMLK-TTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGG 261 (354)
T ss_pred HHHHHHccccccCCCceeEc-CCCCEEEEeeHHhcCCCcccCCCCcCCCCccccHHHHHHhcCC
Confidence 78999999999999999997 8999999999999999865433 48999999999999999753
No 28
>KOG0904|consensus
Probab=99.80 E-value=2.1e-20 Score=152.05 Aligned_cols=64 Identities=36% Similarity=0.460 Sum_probs=60.0
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCC-CCCCceeecHHHHHhhCCCCC
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFRLTPHILAVNEPYGS 68 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~-~E~vPFRLT~~~~~~~g~~g~ 68 (82)
+++||||||||||.+|||| +.||+.+|||||+++|+.+..+.+ .|+|||-||++++.+|+.-+.
T Consensus 919 cVATyVLGIgDRHsDNIMv-ke~GqlFHIDFGHiLGh~KsKlGi~RERvPFvLT~dFl~VI~~G~~ 983 (1076)
T KOG0904|consen 919 CVATYVLGIGDRHSDNIMV-KETGQLFHIDFGHILGHFKSKLGINRERVPFVLTYDFLHVIQKGKT 983 (1076)
T ss_pred eeeeeeecccccccCceEE-eccCcEEEEEhhhhhccchhhcCcccccCceEeecceeeeecccCC
Confidence 6899999999999999999 599999999999999999988887 999999999999999987654
No 29
>KOG0903|consensus
Probab=99.75 E-value=4e-19 Score=142.93 Aligned_cols=64 Identities=30% Similarity=0.405 Sum_probs=58.2
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCc
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQ 69 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~e 69 (82)
|++||+|+|.|||++||||| ..|+|+|||||++++.+|..+. .|..||+||.+++++||+...+
T Consensus 691 SLvcYlLQvKDRHNGNILiD-~EGHIIHIDFGFmLsnsPgnvg-FEsAPFKLT~EylEvmgG~~~d 754 (847)
T KOG0903|consen 691 SLVCYLLQVKDRHNGNILID-EEGHIIHIDFGFMLSNSPGNVG-FESAPFKLTTEYLEVMGGLDSD 754 (847)
T ss_pred HHHHHhhhcccccCCceEec-CCCCEEEEeeeeEecCCCCCcc-cccCchhhHHHHHHHhcCCcHH
Confidence 78999999999999999999 9999999999999999987555 6999999999999999954433
No 30
>KOG0906|consensus
Probab=99.74 E-value=1.8e-18 Score=138.07 Aligned_cols=63 Identities=33% Similarity=0.569 Sum_probs=57.0
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCch
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQE 70 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG 70 (82)
-|++||||||||||++|+|+ ..+|+++|||||++||.+++.++ .|.+|+++|+++||+..++-
T Consensus 689 YsVitYILGvGDRhldNLll-T~dGk~FHiDFgyIlGRDPKP~p----p~MkL~kemve~mgg~es~~ 751 (843)
T KOG0906|consen 689 YSVITYILGVGDRHLDNLLL-TKDGKLFHIDFGYILGRDPKPFP----PPMKLAKEMVEGMGGAESKQ 751 (843)
T ss_pred ceeeeeeecccCCCcCceEE-ccCCcEEEEeeeeeccCCCCCCC----CccccCHHHHHHhcccchHH
Confidence 38999999999999999999 59999999999999999988554 39999999999999987643
No 31
>KOG0891|consensus
Probab=99.65 E-value=4e-18 Score=148.55 Aligned_cols=72 Identities=33% Similarity=0.433 Sum_probs=68.8
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheee
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALS 74 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~ 74 (82)
.|+++|++|+|||||+|.|+++.||++.|||||.||+..+...+.||.+|||||+++.++|.+.|.+|.++.
T Consensus 2133 msmvgyilGlGdrhpsNlmldr~tgkvihidfgdcfevA~~rek~pe~~pfRlTrmli~amev~gl~g~~~~ 2204 (2341)
T KOG0891|consen 2133 MSMVGYILGLGDRHPSNLMLDRLTGKVIHIDFGDCFEVAMLREKFPEKVPFRLTRMLINAMEVTGIEGTYRI 2204 (2341)
T ss_pred HHHHHHHhhccccchhhhhhhhcccceEEechHHHHHHHHhhccccccccHHHHHHHHHhHHHHhhhhHHHH
Confidence 589999999999999999999999999999999999999887788999999999999999999999999863
No 32
>KOG0902|consensus
Probab=99.59 E-value=7.2e-16 Score=130.14 Aligned_cols=62 Identities=29% Similarity=0.338 Sum_probs=56.0
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCC
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYG 67 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g 67 (82)
|+++|.|++.|||++|||+| ..|+++|||||++|+.+|+..-..|. ||+||.+|+.+||+.-
T Consensus 1648 sv~s~lLq~KDRHNGNim~D-d~G~~iHIDFGf~~e~sPGgnl~fE~-~fKLt~Em~~~mgG~~ 1709 (1803)
T KOG0902|consen 1648 SVLSYLLQIKDRHNGNIMID-DQGHIIHIDFGFMFESSPGGNLGFEP-PFKLTKEMVMLMGGKM 1709 (1803)
T ss_pred HHHHHHcccccccCCceeEc-cCCCEEEEeeeeEEecCCCCccCcCC-CccchHHHHHHhCCCC
Confidence 78899999999999999999 99999999999999999875334577 9999999999999654
No 33
>KOG0905|consensus
Probab=99.59 E-value=7.7e-16 Score=128.52 Aligned_cols=63 Identities=29% Similarity=0.353 Sum_probs=55.2
Q ss_pred ceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCC-CCCCceeecHHHHHhhCCCC
Q psy16910 4 SSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPI-PELMPFRLTPHILAVNEPYG 67 (82)
Q Consensus 4 S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~-~E~vPFRLT~~~~~~~g~~g 67 (82)
+++||||||+|||++|||+ ++||+++|||||-.+|...-.-.+ .+++||-+|.+|..+|.+-+
T Consensus 1192 cVaTYVLGIcDRHNDNIMl-~~sGHmFHIDFGKFLGhaQMfg~fKRDRaPFVfTSdMayvINgG~ 1255 (1639)
T KOG0905|consen 1192 CVATYVLGICDRHNDNIML-TKSGHMFHIDFGKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGD 1255 (1639)
T ss_pred eeeeEeeecccccCCceEE-eccCcEEEEehhhhcchHHHhcccccccCCeEEeccchhhhcCCC
Confidence 6899999999999999999 699999999999999987532222 78999999999999987654
No 34
>PTZ00303 phosphatidylinositol kinase; Provisional
Probab=99.47 E-value=1.7e-14 Score=117.64 Aligned_cols=63 Identities=30% Similarity=0.372 Sum_probs=52.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCC
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYG 67 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g 67 (82)
-|+++|+|||||||++||||+ .+|+++|||||++|+..+ .-...-.-|-|+...|...++.+-
T Consensus 1140 YsViTYILgIgDRHngNILId-~dGhLfHIDFGFILg~rt-fkeKl~~s~vR~D~~l~eav~~~q 1202 (1374)
T PTZ00303 1140 FLLLNYIFSIGDRHKGNVLIG-TNGALLHIDFRFIFSEKT-FVEKLARSTVRIDDAFLAAVEQCQ 1202 (1374)
T ss_pred HHHHHHHhccCcccCCceeEc-CCCCEEEEecceeecCch-hhhccCCCceehhHHHHHHHHHHH
Confidence 378999999999999999997 999999999999999875 112234459999999999876543
No 35
>KOG0889|consensus
Probab=98.90 E-value=1.1e-10 Score=104.48 Aligned_cols=74 Identities=23% Similarity=0.295 Sum_probs=69.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCCCchheeeeE
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYGSQEVALSSE 76 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g~eG~f~~~~ 76 (82)
+|+.+|++.++.|.|+.+++.+.||+++..||-+....+++.++..|.||||||||++.++|..|+||++..++
T Consensus 3378 ~~~~~~~lni~~~~p~k~~~~~dsG~v~~~~~~~~~~~~~~~~~~~~~VpFRlTpni~~~i~~~~veg~l~~s~ 3451 (3550)
T KOG0889|consen 3378 FSFMEYMLNINGRGPAKLTFAKDSGKVFNTDFLPSYISSKPIFHNNEPVPFRLTPNIQEFIGDFGVEGLLAGSM 3451 (3550)
T ss_pred HHHHHHHHhcCCCCccceeeeeccccccchhhccCcccCccccccCCcCCeeecCCchhhhcchhhhhhhHHHH
Confidence 57889999999999999999999999999999999988888899999999999999999999999999986543
No 36
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=92.57 E-value=0.11 Score=34.96 Aligned_cols=25 Identities=28% Similarity=0.224 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ +|++.=||||.+-.
T Consensus 142 rDlkP~NIll~--~~~~~liDFG~a~~ 166 (190)
T cd05145 142 GDLSEYNILYH--DGKPYIIDVSQAVE 166 (190)
T ss_pred CCCChhhEEEE--CCCEEEEEccccee
Confidence 68899999997 79999999996543
No 37
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=92.36 E-value=0.13 Score=35.19 Aligned_cols=26 Identities=27% Similarity=0.138 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=+|+|||++ +|++.=||||.+-..
T Consensus 142 rDlkP~NIli~--~~~v~LiDFG~a~~~ 167 (190)
T cd05147 142 ADLSEYNLLYH--DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCCCHHHEEEE--CCcEEEEEccccccC
Confidence 68899999997 589999999976433
No 38
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=91.39 E-value=0.23 Score=31.85 Aligned_cols=27 Identities=30% Similarity=0.186 Sum_probs=22.5
Q ss_pred eeeCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 10 YSIGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 10 lgigDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+.=||=||+||+++ .+++.-|||+.+-
T Consensus 109 ~~HgD~~~~Nil~~--~~~~~liDf~~a~ 135 (170)
T cd05151 109 PCHNDLLPGNFLLD--DGRLWLIDWEYAG 135 (170)
T ss_pred eecCCCCcCcEEEE--CCeEEEEeccccc
Confidence 44589999999997 6789999998643
No 39
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=91.13 E-value=0.26 Score=33.10 Aligned_cols=29 Identities=24% Similarity=0.149 Sum_probs=24.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecccc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVAT 42 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~~ 42 (82)
+|=+|+||+++ .+|++.=+|||.+.....
T Consensus 149 ~Dl~p~Nill~-~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 149 GDLSEFNILVD-DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCCcccEEEc-CCCcEEEEECCccccCCC
Confidence 57799999998 689999999998766654
No 40
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=91.02 E-value=0.2 Score=40.00 Aligned_cols=23 Identities=48% Similarity=0.657 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeece
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~ 36 (82)
+|=||+||+++ ..|+++-+|||.
T Consensus 289 aDpHpGNi~v~-~~g~i~~lDfGi 311 (517)
T COG0661 289 ADPHPGNILVR-SDGRIVLLDFGI 311 (517)
T ss_pred cCCCccceEEe-cCCcEEEEcCcc
Confidence 68999999997 779999999995
No 41
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=90.71 E-value=0.26 Score=32.70 Aligned_cols=23 Identities=35% Similarity=0.485 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
||=+|+||+++ .|++.-|||+.+
T Consensus 114 ~Dl~~~Nil~~--~~~~~liDfg~a 136 (199)
T TIGR03724 114 GDLTTSNIIVR--DDKLYLIDFGLG 136 (199)
T ss_pred CCCCcceEEEE--CCcEEEEECCCC
Confidence 78999999997 799999999853
No 42
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=89.67 E-value=0.28 Score=39.30 Aligned_cols=24 Identities=33% Similarity=0.537 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCC----cEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTG----RCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG----~v~hiDfg~~ 37 (82)
+|=||+||+++ .+| ++.-+|||.+
T Consensus 284 aDpHPGNIlv~-~~g~~~~~i~llDFGiv 311 (537)
T PRK04750 284 ADMHPGNIFVS-YDPPENPRYIALDFGIV 311 (537)
T ss_pred CCCChHHeEEe-cCCCCCCeEEEEecceE
Confidence 78999999997 556 9999999965
No 43
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=89.45 E-value=0.32 Score=37.54 Aligned_cols=24 Identities=38% Similarity=0.659 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=||+||+++ .+|++.-+|||.+
T Consensus 281 ~D~hPgNilv~-~~g~i~liDfG~~ 304 (437)
T TIGR01982 281 ADLHPGNIFVL-KDGKIIALDFGIV 304 (437)
T ss_pred CCCCcccEEEC-CCCcEEEEeCCCe
Confidence 69999999995 8899999999965
No 44
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=89.42 E-value=0.37 Score=31.60 Aligned_cols=27 Identities=30% Similarity=0.288 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
+|=+|+||+++ +|.+.-+|||.+-...
T Consensus 139 ~Dl~p~Nili~--~~~~~liDfg~a~~~~ 165 (187)
T cd05119 139 GDLSEYNILVD--DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCCChhhEEEE--CCcEEEEECccccccc
Confidence 57799999998 8999999999764433
No 45
>TIGR03843 conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.
Probab=89.21 E-value=0.57 Score=34.56 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=31.4
Q ss_pred eeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccccC
Q psy16910 6 LLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVATQ 43 (82)
Q Consensus 6 ~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~~ 43 (82)
+=+++.=.|||.+|||.. .+|+++-||=|.+|....+
T Consensus 141 fDi~inNaDRk~GhiL~~-~dg~l~~IDHGl~f~~~~k 177 (253)
T TIGR03843 141 FDALVNNADRKGGHVLPG-PDGRVWGVDHGVCFHVEPK 177 (253)
T ss_pred heeeeecCCCCCCcEeEc-CCCcEEEecCceecCCCCc
Confidence 345666689999999996 6999999999999998754
No 46
>PRK14879 serine/threonine protein kinase; Provisional
Probab=89.02 E-value=0.45 Score=31.76 Aligned_cols=23 Identities=35% Similarity=0.589 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
||=+|+|||++ .+.+.-|||+.+
T Consensus 119 ~Dl~p~Nil~~--~~~~~liDf~~a 141 (211)
T PRK14879 119 GDLTTSNMILS--GGKIYLIDFGLA 141 (211)
T ss_pred CCCCcccEEEE--CCCEEEEECCcc
Confidence 78999999997 799999999854
No 47
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=88.92 E-value=0.43 Score=31.51 Aligned_cols=31 Identities=35% Similarity=0.267 Sum_probs=22.0
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.+.+.=||=||+|||++...|++.-|||..+
T Consensus 165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a 195 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDA 195 (239)
T ss_dssp CEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred CcEEEEeccccccceeeeccceeEEEecccc
Confidence 4567779999999999877888888999764
No 48
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=88.48 E-value=0.62 Score=33.24 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=27.5
Q ss_pred eeeeeeeCCCCCCcEEEEcC---CCcEEEEeecee
Q psy16910 6 LLLEYSIGDRHLENTLVCTK---TGRCVGIDFGYS 37 (82)
Q Consensus 6 ~~yilgigDRh~~nili~~~---tG~v~hiDfg~~ 37 (82)
..+++.=||=|++|||++.. ++++.-|||.++
T Consensus 177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya 211 (302)
T cd05156 177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA 211 (302)
T ss_pred CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence 45788999999999999843 589999999876
No 49
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=87.77 E-value=0.45 Score=34.31 Aligned_cols=22 Identities=41% Similarity=0.468 Sum_probs=19.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeece
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~ 36 (82)
||=||+||+++ ..| +.-||||.
T Consensus 159 ~Dikp~Nili~-~~g-i~liDfg~ 180 (232)
T PRK10359 159 GDPHKGNFIVS-KNG-LRIIDLSG 180 (232)
T ss_pred CCCChHHEEEe-CCC-EEEEECCC
Confidence 79999999997 677 99999984
No 50
>KOG0616|consensus
Probab=87.21 E-value=0.43 Score=36.55 Aligned_cols=24 Identities=33% Similarity=0.477 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|--|+|||+| ++|.+=-+|||++
T Consensus 168 RDLKPENiLlD-~~G~iKitDFGFA 191 (355)
T KOG0616|consen 168 RDLKPENLLLD-QNGHIKITDFGFA 191 (355)
T ss_pred ccCChHHeeec-cCCcEEEEeccce
Confidence 47789999998 9999999999986
No 51
>smart00090 RIO RIO-like kinase.
Probab=86.41 E-value=0.66 Score=32.83 Aligned_cols=26 Identities=38% Similarity=0.408 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=+|+||+++ ++++.=||||.+...
T Consensus 173 ~Dikp~NIli~--~~~i~LiDFg~a~~~ 198 (237)
T smart00090 173 GDLSEYNILVH--DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCChhhEEEE--CCCEEEEEChhhhcc
Confidence 68899999997 899999999965433
No 52
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=86.07 E-value=0.73 Score=32.57 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+|||++ .+|++.-|||+.+
T Consensus 166 rDlkp~NILv~-~~~~v~LIDfg~~ 189 (239)
T PRK01723 166 ADLNAHNILLD-PDGKFWLIDFDRG 189 (239)
T ss_pred CCCCchhEEEc-CCCCEEEEECCCc
Confidence 58899999997 5789999999843
No 53
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=84.71 E-value=0.63 Score=31.67 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=21.7
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.+++=+|=+++|||++..++++.-|||-++
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya 172 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYA 172 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHH
Confidence 578889999999999779999999999876
No 54
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=84.46 E-value=1.2 Score=26.81 Aligned_cols=24 Identities=38% Similarity=0.368 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
||=+|+||+++ .++.+.-+||+.+
T Consensus 113 ~Dl~~~Nil~~-~~~~~~l~Df~~~ 136 (155)
T cd05120 113 GDLHPGNILVD-DGKILGIIDWEYA 136 (155)
T ss_pred cCCCcceEEEE-CCcEEEEEecccc
Confidence 78899999998 5899999999854
No 55
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=84.41 E-value=1.4 Score=32.46 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=29.5
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
..++.=+|=+++|||++...+++.-|||.++--..
T Consensus 181 ~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd 215 (330)
T PLN02421 181 PVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSY 215 (330)
T ss_pred CeEEEECCCCcccEEEeCCCCcEEEEcccccCCCc
Confidence 35788899999999998677899999999885444
No 56
>KOG0608|consensus
Probab=83.36 E-value=0.9 Score=38.37 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|--|+||||| ..|+|--+|||.|
T Consensus 753 RDiKPDNILID-rdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 753 RDIKPDNILID-RDGHIKLTDFGLC 776 (1034)
T ss_pred cccCccceEEc-cCCceeeeecccc
Confidence 36679999999 8999999999988
No 57
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=83.18 E-value=2.2 Score=29.12 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=26.4
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
..++.=||=|++|||++..++.+.=|||-++-
T Consensus 169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 45788899999999998436889999998653
No 58
>KOG0984|consensus
Probab=82.52 E-value=1.1 Score=33.24 Aligned_cols=23 Identities=35% Similarity=0.410 Sum_probs=20.6
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|-.|+||||+ ..|+|-.+|||-+
T Consensus 174 DvKPsNiLIn-~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 174 DVKPSNILIN-YDGQVKICDFGIS 196 (282)
T ss_pred cCCcceEEEc-cCCcEEEcccccc
Confidence 5679999998 9999999999965
No 59
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=81.96 E-value=1.5 Score=28.90 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=23.5
Q ss_pred eeeeeeCCCCCCcEEEEcC-CCcEEEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTK-TGRCVGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~-tG~v~hiDfg~~ 37 (82)
-+.+-=||=|++||+++.+ ++.+.=|||..+
T Consensus 173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~ 204 (223)
T cd05154 173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELA 204 (223)
T ss_pred CcEEEECCCCcccEEEcCCCCcEEEEEecccc
Confidence 3456669999999999754 455778999754
No 60
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=81.85 E-value=1.3 Score=31.31 Aligned_cols=29 Identities=21% Similarity=0.086 Sum_probs=22.5
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+.+.=||=||+|++++ .++.+.-|||..+
T Consensus 175 ~~l~HgD~~~~Nil~~-~~~~~~iIDfe~a 203 (296)
T cd05153 175 RGVIHADLFRDNVLFD-GDELSGVIDFYFA 203 (296)
T ss_pred CcCCccCcCcccEEEe-CCceEEEeehhhh
Confidence 4455699999999997 5555679999764
No 61
>KOG0598|consensus
Probab=81.18 E-value=0.85 Score=35.16 Aligned_cols=24 Identities=33% Similarity=0.393 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|=-|+|||+| ..|++.-+|||.+
T Consensus 149 RDlKPENILLd-~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 149 RDLKPENILLD-EQGHIKLTDFGLC 172 (357)
T ss_pred ccCCHHHeeec-CCCcEEEeccccc
Confidence 46789999998 9999999999976
No 62
>PRK12274 serine/threonine protein kinase; Provisional
Probab=81.08 E-value=1.6 Score=31.41 Aligned_cols=25 Identities=32% Similarity=0.311 Sum_probs=20.7
Q ss_pred CCC-CCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDR-HLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDR-h~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|= .|+|||++ .+|++.-||||.+-
T Consensus 115 rDL~kp~NILv~-~~g~i~LIDFG~A~ 140 (218)
T PRK12274 115 NDLAKEANWLVQ-EDGSPAVIDFQLAV 140 (218)
T ss_pred CCCCCcceEEEc-CCCCEEEEECCCce
Confidence 555 57999997 78999999999764
No 63
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=79.80 E-value=1.9 Score=31.33 Aligned_cols=22 Identities=36% Similarity=0.274 Sum_probs=19.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg 35 (82)
=||=||+|++++ .+.+.-||++
T Consensus 158 HGD~hpgNFlv~--~~~i~iID~~ 179 (229)
T PF06176_consen 158 HGDPHPGNFLVS--NNGIRIIDTQ 179 (229)
T ss_pred cCCCCcCcEEEE--CCcEEEEECc
Confidence 389999999995 5669999997
No 64
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=78.63 E-value=2.7 Score=29.14 Aligned_cols=42 Identities=29% Similarity=0.261 Sum_probs=26.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHh
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAV 62 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~ 62 (82)
||=++.||+++ .|+++-|||+-+..... +..-.-|.+++.++
T Consensus 131 GDLs~~NIlv~--~~~~~iIDf~qav~~~~------p~a~~~l~RDi~ni 172 (188)
T PF01163_consen 131 GDLSEYNILVD--DGKVYIIDFGQAVDSSH------PNAEELLRRDIENI 172 (188)
T ss_dssp SS-STTSEEEE--TTCEEE--GTTEEETTS------TTHHHHHHHHHHHH
T ss_pred cCCChhhEEee--cceEEEEecCcceecCC------ccHHHHHHHHHHHH
Confidence 88999999996 34999999997766552 22234456665554
No 65
>KOG0658|consensus
Probab=78.05 E-value=1.7 Score=33.59 Aligned_cols=25 Identities=36% Similarity=0.327 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|=-|+|||+|..||.+=-.|||.+
T Consensus 149 RDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 149 RDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred CCCChheEEEcCCCCeEEeccCCcc
Confidence 4668999999999999999999953
No 66
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=77.85 E-value=3 Score=27.41 Aligned_cols=31 Identities=29% Similarity=0.320 Sum_probs=25.0
Q ss_pred eeeCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 10 YSIGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 10 lgigDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
+--||-+|+||+++ .+|++.=+||+.+....
T Consensus 119 i~h~dl~p~ni~i~-~~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 119 IIHRDIKAANILLT-SDGEVKLIDFGLSAQLS 149 (253)
T ss_pred EecCCCCHHHEEEc-cCCeEEEeecccccccc
Confidence 34589999999997 78999999998764443
No 67
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=77.66 E-value=2.2 Score=29.97 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=20.7
Q ss_pred eeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 11 SIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.=||=||+||+++ .+| +.=|||..+
T Consensus 156 ~HgD~~~~Nii~~-~~~-~~iIDwe~a 180 (226)
T TIGR02172 156 LHGDFQIGNLITS-GKG-TYWIDLGDF 180 (226)
T ss_pred EecCCCCCcEEEc-CCC-cEEEechhc
Confidence 4589999999996 566 889999864
No 68
>KOG0594|consensus
Probab=76.88 E-value=1.9 Score=32.79 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-|=.|+||||+ ++|.+--+|||-+-..
T Consensus 144 RDLKPQNlLi~-~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 144 RDLKPQNLLIS-SSGVLKLADFGLARAF 170 (323)
T ss_pred ccCCcceEEEC-CCCcEeeeccchHHHh
Confidence 36689999998 6999999999976433
No 69
>PLN02236 choline kinase
Probab=76.15 E-value=4 Score=30.36 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=27.4
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
..++.=+|=+++|||++..++++.-|||-++-
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 35778899999999998667899999998873
No 70
>PRK10271 thiK thiamine kinase; Provisional
Probab=76.08 E-value=3.2 Score=29.10 Aligned_cols=34 Identities=26% Similarity=0.154 Sum_probs=26.3
Q ss_pred eeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 6 LLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 6 ~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
+-.++.=||=||+|+++. .+| +.=||+.++=..+
T Consensus 75 l~~~p~H~D~~~~N~~~~-~~~-~~lIDwe~a~~gD 108 (188)
T PRK10271 75 LRLAPLHMDVHAGNLVHS-ASG-LRLIDWEYAGDGD 108 (188)
T ss_pred CCeeeecCCCCCccEEEE-CCC-EEEEeCCcccCCC
Confidence 456777899999999984 656 8899999764444
No 71
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=75.86 E-value=1.7 Score=30.95 Aligned_cols=24 Identities=29% Similarity=0.429 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+--+|||.+
T Consensus 125 ~dlkp~Nill~-~~~~~kL~Dfg~~ 148 (324)
T cd05587 125 RDLKLDNVMLD-AEGHIKIADFGMC 148 (324)
T ss_pred cCCCHHHeEEc-CCCCEEEeecCcc
Confidence 67789999997 7899999999965
No 72
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=75.19 E-value=3.3 Score=29.69 Aligned_cols=26 Identities=35% Similarity=0.399 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
||=.++||+++ .++++-||||...-.
T Consensus 116 GDLTtsNiIl~--~~~i~~IDfGLg~~s 141 (204)
T COG3642 116 GDLTTSNIILS--GGRIYFIDFGLGEFS 141 (204)
T ss_pred CCCccceEEEe--CCcEEEEECCccccc
Confidence 78899999994 566999999976543
No 73
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=74.89 E-value=2.7 Score=29.99 Aligned_cols=24 Identities=38% Similarity=0.480 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 120 rDikp~NIll~-~~~~~kL~Dfg~~ 143 (325)
T cd05594 120 RDLKLENLMLD-KDGHIKITDFGLC 143 (325)
T ss_pred cCCCCCeEEEC-CCCCEEEecCCCC
Confidence 67899999997 8899999999965
No 74
>PF01386 Ribosomal_L25p: Ribosomal L25p family; InterPro: IPR020055 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry models the short-form of the ribosomal L25 protein. The long-form has homology to the general stress protein Ctc of Bacillus subtilis, a mesophile, and ribosomal protein TL5 of Thermus thermophilus, a thermophile. Ribosomal protein L25 of Escherichia coli and Haemophilus influenzae appear to be orthologous but consist only of the N-terminal half of Ctc and TL5. Both short (L25-like) and full-length (CTC-like) members of this family bind the E-loop of bacterial 5S rRNA.; GO: 0003735 structural constituent of ribosome, 0008097 5S rRNA binding, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2HGQ_Y 2HGJ_Y 2Y19_Z 2WRL_Z 3KIT_Z 2WH2_Z 2WDN_Z 3V25_Z 3HUZ_Z 3KIY_Z ....
Probab=74.60 E-value=3.8 Score=25.01 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=12.5
Q ss_pred EEEEcCCCcEEEEee
Q psy16910 20 TLVCTKTGRCVGIDF 34 (82)
Q Consensus 20 ili~~~tG~v~hiDf 34 (82)
+-.|.-++++.|+||
T Consensus 74 vQ~~p~~~~i~HvDF 88 (88)
T PF01386_consen 74 VQRDPVTDKILHVDF 88 (88)
T ss_dssp EEEESSSSSEEEEEE
T ss_pred eeeCCCCCCeEeccC
Confidence 334888999999998
No 75
>PRK05231 homoserine kinase; Provisional
Probab=74.47 E-value=3.5 Score=29.58 Aligned_cols=26 Identities=27% Similarity=0.192 Sum_probs=20.4
Q ss_pred eeeCCCCCCcEEEEcCCCcE-EEEeecee
Q psy16910 10 YSIGDRHLENTLVCTKTGRC-VGIDFGYS 37 (82)
Q Consensus 10 lgigDRh~~nili~~~tG~v-~hiDfg~~ 37 (82)
+-=||=||+||+++ .+++ .-|||+.+
T Consensus 189 liHgD~~~~Nil~~--~~~~~~iIDf~~~ 215 (319)
T PRK05231 189 VIHADLFRDNVLFE--GDRLSGFIDFYFA 215 (319)
T ss_pred cCCCCCCCCcEEEE--CCceEEEEecccc
Confidence 34489999999997 4455 69999876
No 76
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=74.27 E-value=3.9 Score=28.20 Aligned_cols=29 Identities=38% Similarity=0.365 Sum_probs=22.1
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcE-EEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRC-VGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v-~hiDfg~~ 37 (82)
.+.|-=||=|++|+|++ .+++ --|||+.+
T Consensus 163 ~~~l~HGD~~~~Nvlv~--~~~i~giIDw~~a 192 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQ--DGRLSAVIDFGCL 192 (235)
T ss_pred CceEEeCCCCCCcEEEE--CCCEEEEEeCccc
Confidence 34566699999999996 3565 48999965
No 77
>KOG0603|consensus
Probab=74.16 E-value=2.8 Score=34.50 Aligned_cols=29 Identities=21% Similarity=0.136 Sum_probs=24.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
.+|=||+|||++..-|++--+|||..-..
T Consensus 438 hRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 438 HRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred ecCCChhheeecCCCCcEEEEEechhhhC
Confidence 58999999999658899999999965443
No 78
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=73.93 E-value=2 Score=29.71 Aligned_cols=25 Identities=32% Similarity=0.395 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+-
T Consensus 134 ~dlkp~Nil~~-~~~~~kl~Dfg~~~ 158 (290)
T cd07862 134 RDLKPQNILVT-SSGQIKLADFGLAR 158 (290)
T ss_pred CCCCHHHEEEc-CCCCEEEccccceE
Confidence 67889999997 88999999999763
No 79
>KOG0983|consensus
Probab=73.75 E-value=2.8 Score=32.28 Aligned_cols=24 Identities=33% Similarity=0.354 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|-.|+|||+| .+|+|--+|||-+
T Consensus 216 RDvKPSNILlD-e~GniKlCDFGIs 239 (391)
T KOG0983|consen 216 RDVKPSNILLD-ERGNIKLCDFGIS 239 (391)
T ss_pred cccCccceEEc-cCCCEEeeccccc
Confidence 35679999999 9999999999954
No 80
>KOG1006|consensus
Probab=73.65 E-value=2.6 Score=32.21 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.8
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|--|+|||+| .+|.|--+|||-+
T Consensus 193 DvKPSNILld-r~G~vKLCDFGIc 215 (361)
T KOG1006|consen 193 DVKPSNILLD-RHGDVKLCDFGIC 215 (361)
T ss_pred cCChhheEEe-cCCCEeeecccch
Confidence 5679999998 9999999999965
No 81
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=73.44 E-value=2.8 Score=28.09 Aligned_cols=25 Identities=40% Similarity=0.458 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.-+|||.+.
T Consensus 122 ~dikp~NIl~~-~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 122 RDIKPENILLD-ENGEVKLIDFGSSV 146 (260)
T ss_dssp SSBSGGGEEES-TTSEEEESSGTTTE
T ss_pred ccccccccccc-cccccccccccccc
Confidence 56789999997 99999999999875
No 82
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=73.12 E-value=2.1 Score=31.06 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+-
T Consensus 125 rDLkp~NIli~-~~~~vkL~DfG~~~ 149 (360)
T cd05627 125 RDIKPDNLLLD-AKGHVKLSDFGLCT 149 (360)
T ss_pred cCCCHHHEEEC-CCCCEEEeeccCCc
Confidence 67789999997 89999999999753
No 83
>PRK09188 serine/threonine protein kinase; Provisional
Probab=73.09 E-value=3.4 Score=31.49 Aligned_cols=25 Identities=28% Similarity=0.315 Sum_probs=20.6
Q ss_pred CCC-CCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDR-HLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDR-h~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|= .|+|||++ .+|++.-+|||.+-
T Consensus 135 rDL~KP~NILv~-~~~~ikLiDFGlA~ 160 (365)
T PRK09188 135 NDLAKPQNWLMG-PDGEAAVIDFQLAS 160 (365)
T ss_pred CCCCCcceEEEc-CCCCEEEEECccce
Confidence 455 48999996 78999999999754
No 84
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=73.08 E-value=2 Score=31.28 Aligned_cols=25 Identities=36% Similarity=0.393 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+|||++ .+|.+.-+|||.+-
T Consensus 155 rDLkp~NILl~-~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 155 RDLKPENLLLD-KDGFIKMTDFGFAK 179 (340)
T ss_pred cCCCHHHEEEC-CCCCEEEecCCCCe
Confidence 67889999997 89999999999764
No 85
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=72.66 E-value=2.6 Score=33.00 Aligned_cols=23 Identities=39% Similarity=0.561 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+|||+ .+++++=||||.+
T Consensus 452 rDlkp~NILl--~~~~~~liDFGla 474 (535)
T PRK09605 452 GDLTTSNFIV--RDDRLYLIDFGLG 474 (535)
T ss_pred CCCChHHEEE--ECCcEEEEeCccc
Confidence 7899999999 5789999999975
No 86
>KOG0592|consensus
Probab=72.57 E-value=2.7 Score=34.38 Aligned_cols=23 Identities=39% Similarity=0.439 Sum_probs=20.3
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|=-|+|||+| .+|++--+|||-+
T Consensus 199 DlKPENILLd-~dmhikITDFGsA 221 (604)
T KOG0592|consen 199 DLKPENILLD-KDGHIKITDFGSA 221 (604)
T ss_pred cCChhheeEc-CCCcEEEeecccc
Confidence 4469999998 9999999999964
No 87
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=72.37 E-value=2.2 Score=30.51 Aligned_cols=24 Identities=38% Similarity=0.635 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.-+|||.+
T Consensus 120 ~dlkp~NIli~-~~~~~kL~DfG~~ 143 (320)
T cd05590 120 RDLKLDNVLLD-HEGHCKLADFGMC 143 (320)
T ss_pred CCCCHHHeEEC-CCCcEEEeeCCCC
Confidence 68899999997 8899999999964
No 88
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=71.95 E-value=4.4 Score=29.15 Aligned_cols=29 Identities=21% Similarity=0.068 Sum_probs=22.8
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+.+-=||=|++|++++ .++.+.-|||..+
T Consensus 187 ~~l~HgD~~~~Nvl~~-~~~~~~vIDfd~~ 215 (307)
T TIGR00938 187 RGVIHADLFPDNVLFD-GDSVKGVIDFYFA 215 (307)
T ss_pred CccCCCCCCcCcEEEE-CCceEEEeecccc
Confidence 4455589999999997 5565689999876
No 89
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=71.69 E-value=2.1 Score=30.50 Aligned_cols=25 Identities=28% Similarity=0.375 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+-
T Consensus 125 rDlkp~Nill~-~~~~~kL~DfG~~~ 149 (323)
T cd05616 125 RDLKLDNVMLD-SEGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEEC-CCCcEEEccCCCce
Confidence 67889999997 88999999999654
No 90
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=71.63 E-value=2.6 Score=29.93 Aligned_cols=24 Identities=33% Similarity=0.365 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+|||.+
T Consensus 117 rDlkp~Nili~-~~~~~kl~Dfg~~ 140 (312)
T cd05585 117 RDLKPENILLD-YQGHIALCDFGLC 140 (312)
T ss_pred CCCCHHHeEEC-CCCcEEEEECccc
Confidence 67789999997 8899999999965
No 91
>KOG0610|consensus
Probab=71.45 E-value=3.4 Score=32.80 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=25.7
Q ss_pred eeee--CCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 9 EYSI--GDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 9 ilgi--gDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
++|| -|=-|+|||| +.+|+|.-.||-.++...
T Consensus 197 mlGivYRDLKPENILv-redGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 197 MLGIVYRDLKPENILV-REDGHIMLSDFDLSLRCP 230 (459)
T ss_pred hhceeeccCCcceeEE-ecCCcEEeeeccccccCC
Confidence 3444 3668999999 599999999998887663
No 92
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=71.38 E-value=3.2 Score=28.55 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=22.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-+|+||+++ .+|++.-+|||..-
T Consensus 124 H~dl~p~Nil~~-~~~~~~l~dfg~~~ 149 (277)
T cd06640 124 HRDIKAANVLLS-EQGDVKLADFGVAG 149 (277)
T ss_pred CcCCChhhEEEc-CCCCEEEcccccce
Confidence 378899999997 88999999998763
No 93
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=71.27 E-value=2.5 Score=30.78 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.-+|||.+
T Consensus 125 rDlkp~Nill~-~~~~ikL~DFG~a 148 (376)
T cd05598 125 RDIKPDNILID-RDGHIKLTDFGLC 148 (376)
T ss_pred CCCCHHHEEEC-CCCCEEEEeCCCC
Confidence 68889999997 8999999999964
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=71.18 E-value=2.5 Score=30.09 Aligned_cols=25 Identities=36% Similarity=0.408 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||.+-
T Consensus 126 ~Dlkp~NIll~-~~~~~kL~Dfg~a~ 150 (330)
T cd05601 126 RDIKPENVLID-RTGHIKLADFGSAA 150 (330)
T ss_pred ccCchHheEEC-CCCCEEeccCCCCe
Confidence 68899999997 89999999999763
No 95
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=70.91 E-value=2.2 Score=30.32 Aligned_cols=24 Identities=38% Similarity=0.463 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|++.=+|||.+
T Consensus 120 ~Dlkp~NIll~-~~~~~kl~Dfg~~ 143 (321)
T cd05603 120 RDLKPENILLD-SQGHVVLTDFGLC 143 (321)
T ss_pred ccCCHHHeEEC-CCCCEEEccCCCC
Confidence 68889999997 7899999999965
No 96
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=70.81 E-value=2.3 Score=29.65 Aligned_cols=26 Identities=27% Similarity=0.333 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+|||++ .+|++.=+|||.+-.
T Consensus 127 ~dlkp~Nil~~-~~~~~kl~DfG~~~~ 152 (288)
T cd07871 127 RDLKPQNLLIN-EKGELKLADFGLARA 152 (288)
T ss_pred CCCCHHHEEEC-CCCCEEECcCcceee
Confidence 67789999997 889999999997643
No 97
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=70.58 E-value=3.2 Score=29.17 Aligned_cols=25 Identities=32% Similarity=0.385 Sum_probs=21.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|=+|+||+++ .+|.+.-+|||.+
T Consensus 124 H~dl~p~NIll~-~~~~~~l~dfg~~ 148 (305)
T cd05609 124 HRDLKPDNLLIT-SMGHIKLTDFGLS 148 (305)
T ss_pred ccCCchHHEEEC-CCCCEEEeeCCCc
Confidence 367899999996 8999999999964
No 98
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=70.31 E-value=4.2 Score=25.46 Aligned_cols=29 Identities=31% Similarity=0.306 Sum_probs=23.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-||=+|+||+++..++++.=+||+.+-..
T Consensus 115 H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 115 HRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred ccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 47889999999844899999999876433
No 99
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=70.15 E-value=2.7 Score=29.97 Aligned_cols=24 Identities=46% Similarity=0.576 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|++.-+|||.+
T Consensus 129 rDlkp~Nili~-~~~~~kl~DfG~~ 152 (332)
T cd05614 129 RDIKLENILLD-SEGHVVLTDFGLS 152 (332)
T ss_pred cCCCHHHeEEC-CCCCEEEeeCcCC
Confidence 67789999997 7899999999965
No 100
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=70.12 E-value=2.9 Score=29.90 Aligned_cols=24 Identities=38% Similarity=0.480 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 119 rDlkp~NIll~-~~~~~kl~DfG~a 142 (323)
T cd05571 119 RDLKLENLMLD-KDGHIKITDFGLC 142 (323)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCCCC
Confidence 67789999997 8899999999965
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=69.93 E-value=2.6 Score=30.00 Aligned_cols=25 Identities=36% Similarity=0.401 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+-
T Consensus 120 ~dikp~NIll~-~~~~~kl~Dfg~~~ 144 (323)
T cd05575 120 RDLKPENILLD-SQGHVVLTDFGLCK 144 (323)
T ss_pred CCCCHHHeEEC-CCCcEEEeccCCCc
Confidence 67889999997 78999999999653
No 102
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=69.88 E-value=3.6 Score=27.99 Aligned_cols=29 Identities=28% Similarity=0.259 Sum_probs=24.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
=||-+|+||+++ .+|.+.=+||+......
T Consensus 121 H~dl~p~nili~-~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 121 HRDLKPENLLIN-TEGVLKLADFGLARSFG 149 (283)
T ss_pred ecCcCHHHEEEC-CCCcEEEeeeeeeEecC
Confidence 489999999997 78999999999775443
No 103
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=69.84 E-value=2.9 Score=29.76 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+-
T Consensus 120 rDikp~Nill~-~~~~~kL~Dfg~~~ 144 (321)
T cd05591 120 RDLKLDNILLD-AEGHCKLADFGMCK 144 (321)
T ss_pred cCCCHHHeEEC-CCCCEEEeecccce
Confidence 67789999997 88999999999653
No 104
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=69.75 E-value=4.4 Score=28.41 Aligned_cols=27 Identities=26% Similarity=0.124 Sum_probs=22.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
||=.+.|||++ .|+++-|||+-+...+
T Consensus 149 GDLs~~NIL~~--~~~v~iIDF~qav~~~ 175 (197)
T cd05146 149 ADLSEYNMLWH--DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCCHHHEEEE--CCcEEEEECCCceeCC
Confidence 78899999995 5899999999766655
No 105
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=69.68 E-value=2.4 Score=30.23 Aligned_cols=24 Identities=38% Similarity=0.448 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+|||++ .+|.+.=+|||.+
T Consensus 120 rDlkp~Nili~-~~~~~kl~DfG~a 143 (325)
T cd05602 120 RDLKPENILLD-SQGHIVLTDFGLC 143 (325)
T ss_pred cCCCHHHeEEC-CCCCEEEccCCCC
Confidence 68899999997 7899999999965
No 106
>PHA02882 putative serine/threonine kinase; Provisional
Probab=69.49 E-value=3.6 Score=28.88 Aligned_cols=24 Identities=38% Similarity=0.483 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ ..+.+.=+|||.+
T Consensus 150 rDiKp~Nill~-~~~~~~l~DFGla 173 (294)
T PHA02882 150 GDIKPENIMVD-GNNRGYIIDYGIA 173 (294)
T ss_pred CCCCHHHEEEc-CCCcEEEEEcCCc
Confidence 56679999997 7789999999975
No 107
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=69.41 E-value=2.9 Score=29.85 Aligned_cols=25 Identities=36% Similarity=0.356 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 125 ~dlkp~Nil~~-~~~~~kL~Dfg~a~ 149 (333)
T cd05600 125 RDLKPENFLID-ASGHIKLTDFGLSK 149 (333)
T ss_pred cCCCHHHEEEC-CCCCEEEEeCcCCc
Confidence 67789999997 88999999999654
No 108
>KOG0612|consensus
Probab=69.29 E-value=6.2 Score=35.00 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=40.5
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceeeccccC-C--CCCCCCCceeecHHHHHhhCCC-CCch
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSFGVATQ-L--LPIPELMPFRLTPHILAVNEPY-GSQE 70 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~~~~~~-~--~~~~E~vPFRLT~~~~~~~g~~-g~eG 70 (82)
|=-|+|||+| ..|+|=-.|||.|+.-..- . -.++=-.|==++|+++..+|.- |.-|
T Consensus 200 DiKPDNvLld-~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG 259 (1317)
T KOG0612|consen 200 DIKPDNVLLD-KSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYG 259 (1317)
T ss_pred cCCcceeEec-ccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccC
Confidence 6679999999 9999999999999765421 1 0111223666899999999887 5444
No 109
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=69.20 E-value=5.2 Score=27.38 Aligned_cols=23 Identities=35% Similarity=0.327 Sum_probs=19.5
Q ss_pred CCCCCCcEEEEcCCC---cEEEEeece
Q psy16910 13 GDRHLENTLVCTKTG---RCVGIDFGY 36 (82)
Q Consensus 13 gDRh~~nili~~~tG---~v~hiDfg~ 36 (82)
||=++.|||++ ..+ +++-|||.-
T Consensus 142 ~Dl~~~NILv~-~~~~~~~~~lIDld~ 167 (206)
T PF06293_consen 142 GDLNPSNILVD-PDDGQYRFYLIDLDR 167 (206)
T ss_pred CCCCcccEEEe-CCCCceeEEEEcchh
Confidence 78899999997 555 899999974
No 110
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=69.13 E-value=4.5 Score=27.45 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .+|.+.=+|||.+-.
T Consensus 127 ~dl~p~Nil~~-~~~~~~l~dfg~~~~ 152 (261)
T cd05068 127 RDLAARNVLVG-ENNICKVADFGLARV 152 (261)
T ss_pred ccCCcceEEEc-CCCCEEECCcceEEE
Confidence 78899999997 889999999987643
No 111
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=69.12 E-value=2.6 Score=28.58 Aligned_cols=28 Identities=29% Similarity=0.146 Sum_probs=23.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-||=+|+||+++ .+|++.-+||+.....
T Consensus 125 H~dl~~~ni~i~-~~~~~~l~df~~~~~~ 152 (280)
T cd05581 125 HRDLKPENILLD-KDMHIKITDFGTAKVL 152 (280)
T ss_pred ecCCCHHHeEEC-CCCCEEecCCcccccc
Confidence 378899999996 8999999999976543
No 112
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=69.10 E-value=3.3 Score=28.21 Aligned_cols=26 Identities=19% Similarity=0.162 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.-+|||.+..
T Consensus 124 ~dlkp~Nill~-~~~~~kl~dfg~~~~ 149 (269)
T cd05042 124 SDLALRNCQLT-ADLSVKIGDYGLALE 149 (269)
T ss_pred ccccHhheEec-CCCcEEEeccccccc
Confidence 67789999997 789999999997643
No 113
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=69.09 E-value=3.2 Score=29.03 Aligned_cols=25 Identities=36% Similarity=0.440 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+-
T Consensus 125 ~dlkp~NIli~-~~~~~kl~Dfg~~~ 149 (291)
T cd05612 125 RDLKPENILLD-KEGHIKLTDFGFAK 149 (291)
T ss_pred cCCCHHHeEEC-CCCCEEEEecCcch
Confidence 67789999997 89999999999754
No 114
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=69.08 E-value=2.9 Score=29.80 Aligned_cols=24 Identities=38% Similarity=0.463 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 120 ~Dlkp~NIll~-~~~~~kL~DfG~~ 143 (325)
T cd05604 120 RDLKPENILLD-SQGHVVLTDFGLC 143 (325)
T ss_pred cCCCHHHeEEC-CCCCEEEeecCCc
Confidence 67789999997 8899999999965
No 115
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=69.06 E-value=3 Score=30.38 Aligned_cols=24 Identities=29% Similarity=0.353 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 125 rDlKp~NILi~-~~~~vkL~DFGla 148 (363)
T cd05628 125 RDIKPDNLLLD-SKGHVKLSDFGLC 148 (363)
T ss_pred cCCCHHHeEEC-CCCCEEEeeccCc
Confidence 67789999997 7899999999965
No 116
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=68.85 E-value=3.5 Score=27.62 Aligned_cols=25 Identities=32% Similarity=0.219 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+||+++ .+|.+.=+|||.+-
T Consensus 117 ~dl~p~nili~-~~~~~~l~d~g~~~ 141 (250)
T cd05085 117 RDLAARNCLVG-ENNVLKISDFGMSR 141 (250)
T ss_pred cccChheEEEc-CCCeEEECCCccce
Confidence 78899999996 89999999999763
No 117
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=68.37 E-value=3.9 Score=27.60 Aligned_cols=27 Identities=30% Similarity=0.223 Sum_probs=22.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|-+|+||+++ .+|.+.-+|||.+..
T Consensus 126 h~di~p~nili~-~~~~~~l~d~g~~~~ 152 (261)
T cd05034 126 HRDLAARNILVG-ENLVCKIADFGLARL 152 (261)
T ss_pred cCCcchheEEEc-CCCCEEECcccccee
Confidence 378899999997 789999999986543
No 118
>KOG1235|consensus
Probab=68.33 E-value=5.3 Score=32.29 Aligned_cols=25 Identities=32% Similarity=0.324 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEc---CCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCT---KTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~---~tG~v~hiDfg~~ 37 (82)
+|=||+||++.+ ..++++-.|+|..
T Consensus 325 aDPHPGNilv~~~~~~~~~ivllDhGl~ 352 (538)
T KOG1235|consen 325 ADPHPGNILVRPNPEGDEEIVLLDHGLY 352 (538)
T ss_pred CCCCCCcEEEecCCCCCccEEEEccccc
Confidence 699999999973 5899999999854
No 119
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=68.02 E-value=4.8 Score=27.61 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-+|+||+++ .+|.+.-+|||..
T Consensus 125 ~dl~p~ni~i~-~~~~~~l~dfg~~ 148 (277)
T cd06642 125 RDIKAANVLLS-EQGDVKLADFGVA 148 (277)
T ss_pred cCCChheEEEe-CCCCEEEcccccc
Confidence 78899999997 7899999999865
No 120
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=67.92 E-value=2.8 Score=29.87 Aligned_cols=24 Identities=38% Similarity=0.497 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+|||.+
T Consensus 120 ~dlkp~Nill~-~~~~~kL~Dfg~a 143 (316)
T cd05592 120 RDLKLDNVLLD-KDGHIKIADFGMC 143 (316)
T ss_pred CCCCHHHeEEC-CCCCEEEccCcCC
Confidence 57789999997 8899999999965
No 121
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=67.74 E-value=5.9 Score=26.59 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=22.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|-.|+||+++ .+|.+.=+||+.+
T Consensus 125 H~di~p~nil~~-~~~~~~l~df~~~ 149 (257)
T cd08223 125 HRDLKTQNVFLT-RTNIIKVGDLGIA 149 (257)
T ss_pred ccCCCchhEEEe-cCCcEEEecccce
Confidence 378899999997 8899999999965
No 122
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=67.69 E-value=6.3 Score=27.07 Aligned_cols=30 Identities=30% Similarity=0.162 Sum_probs=23.3
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
..+|-=||=||+|||++ ..+.+.-|||..+
T Consensus 162 ~~~l~HgD~~~~Nil~~-~~~~~~iIDwe~a 191 (244)
T cd05150 162 DLVVTHGDACLPNIIVD-PGKFSGFIDLGRL 191 (244)
T ss_pred ceEEECCCCCCccEEEe-CCcEEEEEEcccc
Confidence 34566699999999997 4555669999865
No 123
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=67.58 E-value=4.3 Score=27.34 Aligned_cols=24 Identities=33% Similarity=0.207 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .+|++.=+|||.+
T Consensus 128 ~dl~p~nilv~-~~~~~~l~dfg~~ 151 (263)
T cd06625 128 RDIKGANILRD-SAGNVKLGDFGAS 151 (263)
T ss_pred CCCCHHHEEEc-CCCCEEEeecccc
Confidence 78899999997 8899999999965
No 124
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=67.58 E-value=3.4 Score=29.64 Aligned_cols=27 Identities=30% Similarity=0.377 Sum_probs=22.8
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=.|+|||++ .+|.+.=+|||.+-.
T Consensus 141 H~dlkp~NIll~-~~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 141 YRDLKPENLLLD-NKGHVKVTDFGFAKK 167 (329)
T ss_pred ecCCCHHHEEEC-CCCCEEEeeccCceE
Confidence 368889999997 899999999997643
No 125
>KOG0198|consensus
Probab=67.53 E-value=6.7 Score=29.48 Aligned_cols=45 Identities=20% Similarity=0.199 Sum_probs=29.1
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHH
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPH 58 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~ 58 (82)
|=-|+|||++..+|.+-=.|||.........-......+++-||+
T Consensus 142 DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~ 186 (313)
T KOG0198|consen 142 DIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPN 186 (313)
T ss_pred CcccceEEEeCCCCeEEeccCccccccccccccccccccccCCcc
Confidence 556889999855799999999976655421112233446666544
No 126
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=67.50 E-value=3.1 Score=29.67 Aligned_cols=25 Identities=28% Similarity=0.312 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+-
T Consensus 125 ~Dlkp~NIll~-~~~~~kL~Dfg~~~ 149 (350)
T cd05573 125 RDIKPDNILID-ADGHIKLADFGLCK 149 (350)
T ss_pred cCCCHHHeEEC-CCCCEEeecCCCCc
Confidence 67789999997 88999999999764
No 127
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=67.39 E-value=4.2 Score=27.68 Aligned_cols=27 Identities=33% Similarity=0.319 Sum_probs=22.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+||+++ .++.+.-+|||.+...
T Consensus 130 ~di~p~nili~-~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 130 RDLAARNILVN-SNLVCKVSDFGLSRRL 156 (266)
T ss_pred CCCCcceEEEc-CCCCEEECccchhhcc
Confidence 67899999997 8899999999876543
No 128
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=67.14 E-value=3.7 Score=30.28 Aligned_cols=27 Identities=30% Similarity=0.357 Sum_probs=23.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+|||++ .+|.+.=+|||.+...
T Consensus 166 rDLKp~NILl~-~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 166 RDVKPDNMLLD-KHGHLKLADFGTCMKM 192 (370)
T ss_pred cCCCHHHEEEC-CCCCEEEEecccceec
Confidence 57789999997 8899999999977543
No 129
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=66.98 E-value=4.4 Score=27.37 Aligned_cols=27 Identities=30% Similarity=0.259 Sum_probs=22.8
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=+|+||+++ .+|.+.=+|||.+..
T Consensus 123 H~dl~p~nili~-~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 123 HRDLAARNILVS-EDGVAKVSDFGLARV 149 (254)
T ss_pred ccccCcceEEEc-CCCcEEECCCcccee
Confidence 378899999996 789999999997643
No 130
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=66.96 E-value=3.1 Score=29.24 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+-
T Consensus 128 ~dlkp~Nill~-~~~~~kl~Dfg~~~ 152 (309)
T cd07872 128 RDLKPQNLLIN-ERGELKLADFGLAR 152 (309)
T ss_pred CCCCHHHEEEC-CCCCEEECccccce
Confidence 67789999997 88999999999764
No 131
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=66.88 E-value=7.3 Score=26.24 Aligned_cols=27 Identities=26% Similarity=0.188 Sum_probs=22.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|-+|+||+++ .+|.+.=+|||.+...
T Consensus 126 ~di~p~Nili~-~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 126 RDLAARNVLVS-EDLVAKVSDFGLAKEA 152 (256)
T ss_pred hhcccceEEEe-CCCCEEEccccccccc
Confidence 68899999997 8899999999866443
No 132
>KOG2345|consensus
Probab=66.84 E-value=5.4 Score=30.05 Aligned_cols=24 Identities=29% Similarity=0.362 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=-|.|||++ .+|..+-+|||.+
T Consensus 153 ~DiKP~NILls-~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 153 RDIKPANILLS-DSGLPVLMDLGSA 176 (302)
T ss_pred cCCCcceeEec-CCCceEEEeccCc
Confidence 67889999997 7999999999964
No 133
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=66.82 E-value=4.5 Score=27.16 Aligned_cols=26 Identities=31% Similarity=0.277 Sum_probs=22.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-||=.|+||+++ .+|.+.-+|||.+.
T Consensus 124 h~dl~p~ni~i~-~~~~~~l~d~g~~~ 149 (262)
T cd06613 124 HRDIKGANILLT-EDGDVKLADFGVSA 149 (262)
T ss_pred ecCCChhhEEEC-CCCCEEECccccch
Confidence 378899999997 88999999999764
No 134
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=66.74 E-value=3.5 Score=30.26 Aligned_cols=24 Identities=29% Similarity=0.350 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|++.-+|||.+
T Consensus 125 rDlKp~Nili~-~~~~~kL~DFGl~ 148 (381)
T cd05626 125 RDIKPDNILID-LDGHIKLTDFGLC 148 (381)
T ss_pred cCCcHHHEEEC-CCCCEEEeeCcCC
Confidence 67889999997 7899999999964
No 135
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=66.72 E-value=3.3 Score=29.76 Aligned_cols=24 Identities=38% Similarity=0.480 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 119 rDikp~NIll~-~~~~~kL~DfG~~ 142 (328)
T cd05593 119 RDLKLENLMLD-KDGHIKITDFGLC 142 (328)
T ss_pred cccCHHHeEEC-CCCcEEEecCcCC
Confidence 67889999997 8899999999965
No 136
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=66.62 E-value=4 Score=29.26 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+.
T Consensus 120 rDlkp~Nili~-~~~~~kl~Dfg~~~ 144 (327)
T cd05617 120 RDLKLDNVLLD-ADGHIKLTDYGMCK 144 (327)
T ss_pred cCCCHHHEEEe-CCCCEEEeccccce
Confidence 67789999997 88999999999764
No 137
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=66.62 E-value=3.3 Score=29.52 Aligned_cols=24 Identities=42% Similarity=0.452 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|++.=+|||.+
T Consensus 120 rDlkp~Nili~-~~~~~kl~Dfg~a 143 (330)
T cd05586 120 RDLKPENILLD-ATGHIALCDFGLS 143 (330)
T ss_pred ccCCHHHeEEC-CCCCEEEecCCcC
Confidence 67789999997 8899999999965
No 138
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=66.60 E-value=5 Score=27.64 Aligned_cols=25 Identities=28% Similarity=0.262 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-+|+||+++..+|.+.=+|||.+
T Consensus 134 ~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 134 RDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred cCCChHHEEEecCCCeEEEeecccc
Confidence 6889999999866899999999865
No 139
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=66.27 E-value=6 Score=28.79 Aligned_cols=25 Identities=16% Similarity=0.050 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEc------CCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCT------KTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~------~tG~v~hiDfg~~ 37 (82)
||=+++|||++. ..++++-|||+-+
T Consensus 162 gDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 162 RDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred CCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 788999999974 2578999999843
No 140
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=66.23 E-value=4.1 Score=29.35 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.-+|||.+-.
T Consensus 143 rDikp~Nill~-~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 143 RDLKPSNIVVK-SDCTLKILDFGLART 168 (355)
T ss_pred CCCChHHEEEC-CCCCEEEeeCccccc
Confidence 57789999996 889999999997643
No 141
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=66.01 E-value=3.8 Score=29.96 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.-+|||.+
T Consensus 125 rDlKp~NILl~-~~g~~kL~DFGla 148 (382)
T cd05625 125 RDIKPDNILID-RDGHIKLTDFGLC 148 (382)
T ss_pred CCCCHHHEEEC-CCCCEEEeECCCC
Confidence 67789999997 8999999999965
No 142
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=65.92 E-value=5.5 Score=26.83 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+..
T Consensus 124 ~dl~p~nili~-~~~~~~l~dfg~~~~ 149 (255)
T cd08219 124 RDIKSKNIFLT-QNGKVKLGDFGSARL 149 (255)
T ss_pred CCCCcceEEEC-CCCcEEEcccCccee
Confidence 78899999996 889999999997643
No 143
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=65.71 E-value=7.8 Score=26.37 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=22.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|-.|+||+++ .+|++.=+|||.+..
T Consensus 130 h~~l~~~nili~-~~~~~~l~dfg~~~~ 156 (287)
T cd07838 130 HRDLKPQNILVT-SDGQVKIADFGLARI 156 (287)
T ss_pred eccCChhhEEEc-cCCCEEEeccCccee
Confidence 388999999998 669999999997644
No 144
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=65.65 E-value=4.5 Score=29.75 Aligned_cols=27 Identities=30% Similarity=0.379 Sum_probs=23.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+|||++ .+|.+.=+|||.+...
T Consensus 166 rDLkp~NILl~-~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 166 RDVKPDNMLLD-KSGHLKLADFGTCMKM 192 (370)
T ss_pred cCCCHHHEEEc-CCCCEEEEeccceeec
Confidence 67789999997 8999999999987543
No 145
>PRK05943 50S ribosomal protein L25; Reviewed
Probab=65.62 E-value=4.5 Score=25.01 Aligned_cols=18 Identities=22% Similarity=0.086 Sum_probs=14.5
Q ss_pred CcEEE-----EcCCCcEEEEeec
Q psy16910 18 ENTLV-----CTKTGRCVGIDFG 35 (82)
Q Consensus 18 ~nili-----~~~tG~v~hiDfg 35 (82)
.+.++ |+-++++.|+||-
T Consensus 70 ~~v~ikevQ~~pv~~~i~HvDF~ 92 (94)
T PRK05943 70 VKVKVQAVQRHPFKPKLEHIDFV 92 (94)
T ss_pred EEEEEeeeecCcCCCCeEeEeee
Confidence 45665 7789999999995
No 146
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=65.59 E-value=6.3 Score=27.44 Aligned_cols=32 Identities=28% Similarity=0.185 Sum_probs=24.2
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
.++.=||=||+||+++ .+| +.=|||.++--.+
T Consensus 146 ~~l~H~Dl~~~Nil~~-~~~-~~lIDwE~a~~gd 177 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVT-PQG-LKLIDWEYASDGD 177 (256)
T ss_pred CeeecCCCCcCcEEEe-CCC-CEEEeccccCcCC
Confidence 3566799999999997 555 7899998764333
No 147
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=65.46 E-value=4.9 Score=27.32 Aligned_cols=25 Identities=32% Similarity=0.332 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+||+++ .+|.+.=+|||.+-
T Consensus 126 ~dl~~~Nill~-~~~~~~l~dfg~~~ 150 (260)
T cd05069 126 RDLRAANILVG-DNLVCKIADFGLAR 150 (260)
T ss_pred cccCcceEEEc-CCCeEEECCCccce
Confidence 78899999997 88999999999763
No 148
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=65.31 E-value=6.9 Score=27.09 Aligned_cols=26 Identities=27% Similarity=0.264 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++..++.+.-+|||.+.
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred CCCCcceEEEECCCCEEEEccccccc
Confidence 68899999998777888888999763
No 149
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=65.23 E-value=3.8 Score=29.62 Aligned_cols=25 Identities=24% Similarity=0.199 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 147 rDlkp~NIl~~-~~~~~kl~Dfg~a~ 171 (359)
T cd07876 147 RDLKPSNIVVK-SDCTLKILDFGLAR 171 (359)
T ss_pred CCCCHHHEEEC-CCCCEEEecCCCcc
Confidence 57789999997 88999999999753
No 150
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=65.22 E-value=3.5 Score=29.82 Aligned_cols=25 Identities=28% Similarity=0.224 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+.
T Consensus 192 rDlkp~NIll~-~~~~~kL~DfG~~~ 216 (353)
T PLN00034 192 RDIKPSNLLIN-SAKNVKIADFGVSR 216 (353)
T ss_pred cCCCHHHEEEc-CCCCEEEcccccce
Confidence 68889999997 78999999999753
No 151
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=65.15 E-value=5.5 Score=26.69 Aligned_cols=27 Identities=30% Similarity=0.166 Sum_probs=23.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=.|+||+++ .+|.+.=+|||....
T Consensus 116 h~di~p~nili~-~~~~~~l~d~g~~~~ 142 (251)
T cd05041 116 HRDLAARNCLVG-ENNVLKISDFGMSRE 142 (251)
T ss_pred hhhcCcceEEEc-CCCcEEEeecccccc
Confidence 378899999997 889999999997643
No 152
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=65.12 E-value=4.8 Score=28.88 Aligned_cols=26 Identities=27% Similarity=0.310 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+|||++ .+|.+.=+|||.+..
T Consensus 126 rDlkp~Nill~-~~~~~kl~DfG~a~~ 151 (331)
T cd05624 126 RDIKPDNVLLD-MNGHIRLADFGSCLK 151 (331)
T ss_pred ccCchHHEEEc-CCCCEEEEeccceee
Confidence 57789999997 899999999997643
No 153
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=65.12 E-value=3.9 Score=29.28 Aligned_cols=25 Identities=28% Similarity=0.375 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+-
T Consensus 125 rDikp~Nill~-~~~~ikL~Dfg~~~ 149 (323)
T cd05615 125 RDLKLDNVMLD-SEGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEEC-CCCCEEEecccccc
Confidence 57789999997 88999999999653
No 154
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=65.08 E-value=6.4 Score=28.01 Aligned_cols=24 Identities=25% Similarity=0.296 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+|||.+
T Consensus 198 rDiKp~Nil~~-~~~~~kl~DfG~a 221 (338)
T cd05102 198 RDLAARNILLS-ENNVVKICDFGLA 221 (338)
T ss_pred CCCccceEEEc-CCCcEEEeecccc
Confidence 57789999997 7899999999965
No 155
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=64.93 E-value=3.5 Score=28.97 Aligned_cols=26 Identities=27% Similarity=0.360 Sum_probs=22.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .+|.+.-+|||.+..
T Consensus 139 ~dL~p~Nili~-~~~~~~l~Dfg~~~~ 164 (297)
T cd06656 139 RDIKSDNILLG-MDGSVKLTDFGFCAQ 164 (297)
T ss_pred CCCCHHHEEEC-CCCCEEECcCccceE
Confidence 78899999997 889999999997644
No 156
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=64.92 E-value=4.8 Score=28.25 Aligned_cols=28 Identities=29% Similarity=0.279 Sum_probs=23.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|=+|+||+++ .+|.+.=+||+.+...
T Consensus 126 H~dlkp~Nili~-~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 126 YRDLKPENILLH-ESGHIMLSDFDLSKQS 153 (316)
T ss_pred ccCCChHHeEEc-CCCCEEEeecchhhcc
Confidence 478899999997 7899999999976543
No 157
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=64.89 E-value=8.1 Score=27.30 Aligned_cols=29 Identities=24% Similarity=0.353 Sum_probs=24.3
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.+.+.=||=|++|++++. +++.-|||..+
T Consensus 186 ~~~liHgD~~~~Nil~~~--~~i~lIDfd~~ 214 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD--NEVYVIDFDYC 214 (313)
T ss_pred cCceEcCCCCcccEEEeC--CcEEEEECccc
Confidence 456778999999999974 78999999854
No 158
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=64.84 E-value=4.3 Score=28.37 Aligned_cols=24 Identities=33% Similarity=0.249 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 162 ~dlkp~Nill~-~~~~~kl~DfG~~ 185 (304)
T cd05096 162 RDLATRNCLVG-ENLTIKIADFGMS 185 (304)
T ss_pred cCcchhheEEc-CCccEEECCCccc
Confidence 67899999997 7899999999965
No 159
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=64.82 E-value=3.5 Score=28.91 Aligned_cols=25 Identities=32% Similarity=0.388 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 127 ~dlkp~Nill~-~~~~~kl~Dfg~~~ 151 (303)
T cd07869 127 RDLKPQNLLIS-DTGELKLADFGLAR 151 (303)
T ss_pred CCCCHHHEEEC-CCCCEEECCCCcce
Confidence 67889999997 88999999999764
No 160
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=64.69 E-value=4.3 Score=29.60 Aligned_cols=24 Identities=33% Similarity=0.414 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+|||++ .+|.+.-+|||.+
T Consensus 125 rDlkp~NIll~-~~~~~kl~DfGla 148 (377)
T cd05629 125 RDIKPDNILID-RGGHIKLSDFGLS 148 (377)
T ss_pred cCCCHHHEEEC-CCCCEEEeecccc
Confidence 67789999997 8899999999965
No 161
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=64.63 E-value=5.3 Score=26.61 Aligned_cols=29 Identities=28% Similarity=0.125 Sum_probs=24.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-+|=.|+||+++ .+|.+.-+|||.+....
T Consensus 126 h~dl~~~nil~~-~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 126 HRDLAARNCLVG-ENLVVKISDFGLSRDLY 154 (258)
T ss_pred ecccccceEEEc-cCCeEEEcccCCceecc
Confidence 378899999997 88899999999775443
No 162
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=64.59 E-value=16 Score=24.32 Aligned_cols=28 Identities=21% Similarity=0.051 Sum_probs=22.8
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|=+|+||+++ .++.+.-+|||.+...
T Consensus 126 h~~l~~~ni~~~-~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 126 HRDLKSANILLV-ANDLVKIGDLGISKVL 153 (256)
T ss_pred cCCCCcceEEEe-cCCcEEEeeccchhhh
Confidence 367789999997 6899999999876443
No 163
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=64.52 E-value=3.3 Score=29.64 Aligned_cols=25 Identities=36% Similarity=0.414 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.=+|||.+-
T Consensus 119 ~Dlkp~NIll~-~~~~~kL~Dfg~~~ 143 (323)
T cd05595 119 RDIKLENLMLD-KDGHIKITDFGLCK 143 (323)
T ss_pred cCCCHHHEEEc-CCCCEEecccHHhc
Confidence 67789999997 88999999999653
No 164
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=64.28 E-value=4.5 Score=27.70 Aligned_cols=26 Identities=27% Similarity=0.285 Sum_probs=22.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-||-+|+||+++ .+|.+.=+||+.+.
T Consensus 122 H~dl~p~nil~~-~~~~~~l~df~~~~ 147 (283)
T cd07835 122 HRDLKPQNLLID-REGALKLADFGLAR 147 (283)
T ss_pred CCCCCHHHEEEc-CCCcEEEeeccccc
Confidence 389999999998 59999999998764
No 165
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=64.26 E-value=4.2 Score=27.61 Aligned_cols=25 Identities=24% Similarity=0.236 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .++.+.-+|||.+-
T Consensus 136 ~dlkp~Nil~~-~~~~~kl~Dfg~~~ 160 (272)
T cd05075 136 RDLAARNCMLN-ENMNVCVADFGLSK 160 (272)
T ss_pred cccchhheEEc-CCCCEEECCCCccc
Confidence 67789999996 78999999999653
No 166
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=64.22 E-value=4.4 Score=28.12 Aligned_cols=27 Identities=30% Similarity=0.310 Sum_probs=22.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=+|+||+++ .+|.+.-+|||.+-.
T Consensus 124 H~dl~p~nili~-~~~~~kl~dfg~~~~ 150 (290)
T cd05580 124 YRDLKPENLLLD-SDGYIKITDFGFAKR 150 (290)
T ss_pred cCCCCHHHEEEC-CCCCEEEeeCCCccc
Confidence 378899999996 889999999986543
No 167
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=64.18 E-value=4.9 Score=30.81 Aligned_cols=25 Identities=32% Similarity=0.305 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+|||++ .+|.+.-+|||.+-
T Consensus 193 rDlkp~NIll~-~~~~~kL~DFgla~ 217 (478)
T PTZ00267 193 RDLKSANIFLM-PTGIIKLGDFGFSK 217 (478)
T ss_pred CCcCHHhEEEC-CCCcEEEEeCcCce
Confidence 68899999997 88999999999764
No 168
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=64.10 E-value=3.4 Score=29.47 Aligned_cols=24 Identities=29% Similarity=0.473 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 120 rDlkp~Nil~~-~~~~~kl~Dfg~~ 143 (316)
T cd05620 120 RDLKLDNVMLD-RDGHIKIADFGMC 143 (316)
T ss_pred cCCCHHHeEEC-CCCCEEeCccCCC
Confidence 67889999997 7899999999965
No 169
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=63.96 E-value=4.5 Score=27.35 Aligned_cols=26 Identities=31% Similarity=0.337 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ .+|.+.-+|||.+-.
T Consensus 127 ~dl~p~nili~-~~~~~~l~dfg~~~~ 152 (261)
T cd05072 127 RDLRAANVLVS-ESLMCKIADFGLARV 152 (261)
T ss_pred cccchhhEEec-CCCcEEECCCcccee
Confidence 67889999997 889999999997643
No 170
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=63.80 E-value=6 Score=28.48 Aligned_cols=25 Identities=36% Similarity=0.292 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 128 ~dlkp~Nili~-~~~~~kL~Dfg~~~ 152 (333)
T cd06650 128 RDVKPSNILVN-SRGEIKLCDFGVSG 152 (333)
T ss_pred cCCChhhEEEc-CCCCEEEeeCCcch
Confidence 68899999997 78999999999753
No 171
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=63.78 E-value=4.5 Score=29.29 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.-+|||.+-.
T Consensus 150 ~Dlkp~NIll~-~~~~~kL~DfG~a~~ 175 (364)
T cd07875 150 RDLKPSNIVVK-SDCTLKILDFGLART 175 (364)
T ss_pred CCCCHHHEEEC-CCCcEEEEeCCCccc
Confidence 67789999996 889999999997643
No 172
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=63.78 E-value=6 Score=26.62 Aligned_cols=24 Identities=25% Similarity=0.259 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .+|.+.=+|||..
T Consensus 121 ~di~p~nil~~-~~~~~kl~dfg~~ 144 (257)
T cd05040 121 RDLAARNILLA-SDDKVKIGDFGLM 144 (257)
T ss_pred cccCcccEEEe-cCCEEEecccccc
Confidence 68899999997 6799999999865
No 173
>KOG0605|consensus
Probab=63.50 E-value=4.5 Score=32.89 Aligned_cols=23 Identities=35% Similarity=0.408 Sum_probs=21.1
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|=-|+|+||| .+|++=-.|||.+
T Consensus 266 DIKPdNlLiD-~~GHiKLSDFGLs 288 (550)
T KOG0605|consen 266 DIKPDNLLID-AKGHIKLSDFGLS 288 (550)
T ss_pred cCChhheeec-CCCCEeecccccc
Confidence 5579999999 9999999999987
No 174
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=63.47 E-value=5.7 Score=28.45 Aligned_cols=24 Identities=38% Similarity=0.376 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 128 ~dlkp~Nil~~-~~~~~kl~Dfg~~ 151 (331)
T cd06649 128 RDVKPSNILVN-SRGEIKLCDFGVS 151 (331)
T ss_pred CCCChhhEEEc-CCCcEEEccCccc
Confidence 68889999997 8899999999965
No 175
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=63.36 E-value=4.4 Score=27.47 Aligned_cols=24 Identities=29% Similarity=0.291 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+|||.+
T Consensus 124 ~dl~p~ni~i~-~~~~~kl~dfg~~ 147 (256)
T cd05059 124 RDLAARNCLVG-EDNVVKVSDFGLA 147 (256)
T ss_pred ccccHhhEEEC-CCCcEEECCcccc
Confidence 77889999997 8999999999865
No 176
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=63.26 E-value=5.2 Score=26.68 Aligned_cols=27 Identities=19% Similarity=0.042 Sum_probs=22.8
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=+|+||+++ .+|.+.=+||+.+-.
T Consensus 133 h~dl~p~nili~-~~~~~kl~d~g~~~~ 159 (265)
T cd08217 133 HRDLKPANIFLD-ANNNVKLGDFGLAKI 159 (265)
T ss_pred ecCCCHHHEEEe-cCCCEEEeccccccc
Confidence 378889999997 789999999996543
No 177
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=63.23 E-value=5.1 Score=29.19 Aligned_cols=25 Identities=28% Similarity=0.147 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.-+|||.+-
T Consensus 127 ~dlkp~Nili~-~~~~~kL~Dfg~a~ 151 (372)
T cd07853 127 RDIKPGNLLVN-SNCVLKICDFGLAR 151 (372)
T ss_pred CCCChHHEEEC-CCCCEEecccccee
Confidence 67789999997 88999999999764
No 178
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=63.22 E-value=4.3 Score=27.70 Aligned_cols=26 Identities=35% Similarity=0.293 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-+|+||+++ .++++.-+|||.+-
T Consensus 129 h~dlkp~nili~-~~~~~~l~dfg~~~ 154 (267)
T cd05066 129 HRDLAARNILVN-SNLVCKVSDFGLSR 154 (267)
T ss_pred ehhhchhcEEEC-CCCeEEeCCCCccc
Confidence 378899999996 78999999998764
No 179
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=63.07 E-value=4.4 Score=29.22 Aligned_cols=24 Identities=29% Similarity=0.331 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.-+|||.+
T Consensus 125 ~Dlkp~NIl~~-~~~~~kl~Dfg~~ 148 (364)
T cd05599 125 RDIKPDNLLLD-AKGHIKLSDFGLC 148 (364)
T ss_pred ccCCHHHeEEC-CCCCEEEeecccc
Confidence 67889999997 8999999999975
No 180
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=62.97 E-value=5.6 Score=26.76 Aligned_cols=25 Identities=32% Similarity=0.234 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||.+-
T Consensus 118 ~dl~p~nil~~-~~~~~kl~dfg~~~ 142 (252)
T cd05084 118 RDLAARNCLVT-EKNVLKISDFGMSR 142 (252)
T ss_pred cccchheEEEc-CCCcEEECccccCc
Confidence 67789999997 88999999998653
No 181
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=62.95 E-value=4.5 Score=28.85 Aligned_cols=24 Identities=33% Similarity=0.386 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 124 ~dlkp~Nil~~-~~~~~kl~Dfg~~ 147 (323)
T cd05584 124 RDLKPENILLD-AQGHVKLTDFGLC 147 (323)
T ss_pred CCCCHHHeEEC-CCCCEEEeeCcCC
Confidence 67889999997 8899999999964
No 182
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=62.93 E-value=4.3 Score=27.79 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.-+|||.+-
T Consensus 125 ~dl~p~nil~~-~~~~~~l~dfg~~~ 149 (285)
T cd07861 125 RDLKPQNLLID-NKGVIKLADFGLAR 149 (285)
T ss_pred cCCCHHHEEEc-CCCcEEECccccee
Confidence 78899999997 89999999999653
No 183
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=62.89 E-value=8.6 Score=27.48 Aligned_cols=26 Identities=23% Similarity=0.179 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+-=+|||.+..
T Consensus 142 rdikp~Nil~~-~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 142 RDLKPSNVAVN-EDCELRILDFGLARQ 167 (343)
T ss_pred ccCChhhEEEC-CCCCEEEcCCcccee
Confidence 67789999997 889999999997654
No 184
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=62.83 E-value=4.8 Score=28.92 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 120 ~Dikp~Nili~-~~~~~kL~DfG~~~ 144 (329)
T cd05618 120 RDLKLDNVLLD-SEGHIKLTDYGMCK 144 (329)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCCccc
Confidence 67889999997 88999999999653
No 185
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=62.55 E-value=10 Score=24.98 Aligned_cols=29 Identities=28% Similarity=0.202 Sum_probs=23.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-||-+|+||+++ ..|++.=+||+......
T Consensus 124 h~dl~p~ni~i~-~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 124 HRDIKGANILVD-SDGVVKLADFGCAKRLG 152 (260)
T ss_pred ccCCCHHHEEEc-CCCCEEEcccccEEecc
Confidence 478899999997 68999999999765444
No 186
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=62.53 E-value=5.4 Score=27.15 Aligned_cols=26 Identities=38% Similarity=0.302 Sum_probs=22.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++...+++.-+|||.+-
T Consensus 132 ~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 132 RDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred cCCCHHHEEEcCCCCeEEEecchhhe
Confidence 78899999998778999999998653
No 187
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=62.50 E-value=8 Score=25.84 Aligned_cols=25 Identities=16% Similarity=-0.031 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+||+++ .+|.+.=+||+.+.
T Consensus 125 ~dl~~~nili~-~~~~~~l~df~~~~ 149 (256)
T cd08529 125 RDIKSLNLFLD-AYDNVKIGDLGVAK 149 (256)
T ss_pred CCCCcceEEEe-CCCCEEEcccccce
Confidence 68899999997 78999999998654
No 188
>cd00495 Ribosomal_L25_TL5_CTC Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this family are believed to have two functions, acting as both ribosomal and stress proteins. In Escherichia coli, cells deleted for L25 were found to be viable; however, these cells grew slowly and had impaired protein synthesis capability. In Bacillus subtilis, CTC is induced under stress conditions and located in the ribosome; it has been proposed that CTC may be necessary for accurate translation under stress conditions. Ribosomal_L25_TL5_CTC is found only in bacteria and some plastids. Due to its limited taxonomic diversity and the viability of cells deleted for L25, this protein is not believed to be necessary for ribosomal assembly. Eukaryotes contain a protein called L25, which is not homologous to bacterial L
Probab=62.36 E-value=4.3 Score=24.72 Aligned_cols=13 Identities=15% Similarity=0.250 Sum_probs=11.7
Q ss_pred EcCCCcEEEEeec
Q psy16910 23 CTKTGRCVGIDFG 35 (82)
Q Consensus 23 ~~~tG~v~hiDfg 35 (82)
|+-++++.|+||-
T Consensus 78 ~pv~~~i~HvDF~ 90 (91)
T cd00495 78 HPVKDKILHVDFL 90 (91)
T ss_pred ccCCCCEEEEecc
Confidence 7889999999994
No 189
>KOG0593|consensus
Probab=62.21 E-value=5.1 Score=31.10 Aligned_cols=24 Identities=33% Similarity=0.513 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|--|+||||+ .+|.+=-+|||++
T Consensus 125 RDIKPENILit-~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 125 RDIKPENILIT-QNGVVKLCDFGFA 148 (396)
T ss_pred ccCChhheEEe-cCCcEEeccchhh
Confidence 36679999996 9999999999986
No 190
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=62.19 E-value=5.2 Score=27.83 Aligned_cols=25 Identities=28% Similarity=0.292 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.=+|||.+-
T Consensus 126 ~dikp~Nill~-~~~~~kl~Dfg~~~ 150 (285)
T cd05631 126 RDLKPENILLD-DRGHIRISDLGLAV 150 (285)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCCCcE
Confidence 67789999997 88999999999653
No 191
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=62.02 E-value=4.5 Score=27.79 Aligned_cols=25 Identities=36% Similarity=0.400 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 132 ~dikp~Nili~-~~~~~kl~dfg~~~ 156 (288)
T cd07863 132 RDLKPENILVT-SGGQVKLADFGLAR 156 (288)
T ss_pred CCCCHHHEEEC-CCCCEEECccCccc
Confidence 68889999997 88999999998753
No 192
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=61.92 E-value=11 Score=25.52 Aligned_cols=28 Identities=29% Similarity=0.192 Sum_probs=23.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
+|=.|+||+++ .+|.+.=+||+.+....
T Consensus 128 ~dlkp~nil~~-~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 128 RDLAARNCLVG-ENHLVKVADFGLSRLMT 155 (263)
T ss_pred cccCcceEEEc-CCCcEEeCCCccccccc
Confidence 78899999996 89999999999765443
No 193
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=61.89 E-value=6.7 Score=27.17 Aligned_cols=26 Identities=31% Similarity=0.262 Sum_probs=22.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=+|+||+++ .+|++.=+|||.+.
T Consensus 133 H~dlkp~Nili~-~~~~~kl~dfg~~~ 158 (292)
T cd06644 133 HRDLKAGNVLLT-LDGDIKLADFGVSA 158 (292)
T ss_pred ecCCCcceEEEc-CCCCEEEccCccce
Confidence 378899999996 78999999999654
No 194
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=61.85 E-value=4.2 Score=28.42 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.-+|||.+-
T Consensus 128 ~dlkp~Nil~~-~~~~~kl~dfg~~~ 152 (301)
T cd07873 128 RDLKPQNLLIN-ERGELKLADFGLAR 152 (301)
T ss_pred CCCCHHHEEEC-CCCcEEECcCcchh
Confidence 68899999997 88999999999764
No 195
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=61.71 E-value=4.5 Score=28.91 Aligned_cols=25 Identities=32% Similarity=0.384 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.-+|||.+-
T Consensus 120 rdikp~Nil~~-~~~~~kl~Dfg~~~ 144 (316)
T cd05619 120 RDLKLDNILLD-TDGHIKIADFGMCK 144 (316)
T ss_pred CCCCHHHEEEC-CCCCEEEccCCcce
Confidence 67889999997 78999999999653
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=61.70 E-value=7.3 Score=26.78 Aligned_cols=24 Identities=33% Similarity=0.314 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|++.-+|||.+
T Consensus 127 ~dlkp~nili~-~~~~~kl~dfg~~ 150 (282)
T cd06643 127 RDLKAGNILFT-LDGDIKLADFGVS 150 (282)
T ss_pred cCCCcccEEEc-cCCCEEEcccccc
Confidence 68889999996 8899999999865
No 197
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=61.66 E-value=6.5 Score=26.57 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 126 ~dlkp~nil~~-~~~~~kl~dfg~~~ 150 (256)
T cd05082 126 RDLAARNVLVS-EDNVAKVSDFGLTK 150 (256)
T ss_pred cccchheEEEc-CCCcEEecCCccce
Confidence 67789999997 89999999999654
No 198
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=61.66 E-value=6.8 Score=26.80 Aligned_cols=25 Identities=32% Similarity=0.181 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+.=+|||.+-
T Consensus 148 ~dlkp~Nil~~-~~~~~~L~dfg~~~ 172 (283)
T cd05048 148 RDLAARNCLVG-EGLTVKISDFGLSR 172 (283)
T ss_pred cccccceEEEc-CCCcEEECCCccee
Confidence 68899999997 78889889999653
No 199
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=61.62 E-value=6.6 Score=26.41 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
||=+|+||+++ .+|.+.=+||+.+.
T Consensus 130 ~dl~p~nil~~-~~~~~~l~d~~~~~ 154 (267)
T cd08224 130 RDIKPANVFIT-ATGVVKLGDLGLGR 154 (267)
T ss_pred CCcChhhEEEC-CCCcEEEeccceee
Confidence 78899999997 78999999998753
No 200
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=61.52 E-value=6.1 Score=26.97 Aligned_cols=28 Identities=25% Similarity=0.179 Sum_probs=23.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
=+|=+|+||+++ .+|.+.=+|||.+...
T Consensus 122 H~dl~p~ni~~~-~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 122 HRDLKPANLLIS-ADGVLKIADFGLARLF 149 (286)
T ss_pred cCCcCHHHEEEc-CCCcEEEeeeeecccc
Confidence 368899999997 6899999999976543
No 201
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=61.39 E-value=5 Score=27.02 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
||-+|+||+++ .+|.+.-+|||.+.
T Consensus 137 ~~l~p~ni~~~-~~~~~~l~d~~~~~ 161 (275)
T cd06608 137 RDIKGQNILLT-KNAEVKLVDFGVSA 161 (275)
T ss_pred CCCCHHHEEEc-cCCeEEECCCccce
Confidence 78899999997 78999999998653
No 202
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=61.35 E-value=6.1 Score=26.95 Aligned_cols=26 Identities=35% Similarity=0.427 Sum_probs=22.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-+|+||+++ .+|.+.=+|||.+..
T Consensus 124 ~dl~p~nil~~-~~~~~~l~dfg~~~~ 149 (286)
T cd07847 124 RDVKPENILIT-KQGQIKLCDFGFARI 149 (286)
T ss_pred cCCChhhEEEc-CCCcEEECcccccee
Confidence 78899999997 889999999997654
No 203
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=61.29 E-value=6.2 Score=29.07 Aligned_cols=26 Identities=31% Similarity=0.373 Sum_probs=22.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|++.=+|||.+..
T Consensus 166 rDLkp~NIll~-~~~~ikL~DfG~a~~ 191 (371)
T cd05622 166 RDVKPDNMLLD-KSGHLKLADFGTCMK 191 (371)
T ss_pred CCCCHHHEEEC-CCCCEEEEeCCceeE
Confidence 67789999997 789999999997644
No 204
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=61.26 E-value=8.6 Score=26.41 Aligned_cols=26 Identities=35% Similarity=0.312 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|++.=+|||.+..
T Consensus 127 ~dl~p~nil~~-~~~~~~l~dfg~~~~ 152 (286)
T cd06622 127 RDVKPTNVLVN-GNGQVKLCDFGVSGN 152 (286)
T ss_pred CCCCHHHEEEC-CCCCEEEeecCCccc
Confidence 67889999997 699999999997643
No 205
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=61.09 E-value=9.1 Score=25.46 Aligned_cols=26 Identities=31% Similarity=0.304 Sum_probs=22.2
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-||=+|+||+++ .+|.+.=+||+..-
T Consensus 116 H~~l~p~ni~~~-~~~~~~l~d~~~~~ 141 (250)
T cd05123 116 YRDLKPENILLD-ADGHIKLTDFGLAK 141 (250)
T ss_pred ecCCCcceEEEc-CCCcEEEeecCcce
Confidence 478899999997 78999999998653
No 206
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=60.96 E-value=8.8 Score=27.71 Aligned_cols=29 Identities=24% Similarity=0.251 Sum_probs=22.3
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEE-EEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCV-GIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~-hiDfg~~ 37 (82)
.++-=||=|++||+++ .+|++. =|||+.+
T Consensus 185 ~~lvHGD~~~~Nilv~-~~~~~~gviDWe~a 214 (276)
T cd05152 185 TVLVHGDLHPGHILID-EDARVTGLIDWTEA 214 (276)
T ss_pred CeeEeCCCCCCcEEEe-CCCCEEEEECcHhc
Confidence 3455599999999998 447764 7899865
No 207
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=60.89 E-value=6 Score=31.54 Aligned_cols=25 Identities=24% Similarity=0.319 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|=.|+|||++..+|.+.=+|||.+
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA 303 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAA 303 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCc
Confidence 4668999999877899999999976
No 208
>PHA03212 serine/threonine kinase US3; Provisional
Probab=60.79 E-value=7 Score=29.21 Aligned_cols=24 Identities=29% Similarity=0.364 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ ..|.+.=+|||.+
T Consensus 206 rDiKP~NIll~-~~~~vkL~DFG~a 229 (391)
T PHA03212 206 RDIKAENIFIN-HPGDVCLGDFGAA 229 (391)
T ss_pred CCCChHhEEEc-CCCCEEEEeCCcc
Confidence 56789999997 8899999999975
No 209
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=60.63 E-value=6.2 Score=27.44 Aligned_cols=25 Identities=32% Similarity=0.199 Sum_probs=21.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|-.|+||+++ .++.+.=+|||.+
T Consensus 152 H~dlkp~Nill~-~~~~~kl~dfg~~ 176 (295)
T cd05097 152 HRDLATRNCLVG-NHYTIKIADFGMS 176 (295)
T ss_pred ccccChhhEEEc-CCCcEEecccccc
Confidence 378899999997 7889999999865
No 210
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=60.47 E-value=5.4 Score=27.11 Aligned_cols=28 Identities=25% Similarity=0.175 Sum_probs=23.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|-+|+||+++ .+|.+.=+|||.+...
T Consensus 123 h~dl~p~nil~~-~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 123 HRDIKGSNILIN-NDGVLKLADFGLARPY 150 (287)
T ss_pred eccCcHHHeEEc-CCCCEEEccccceeec
Confidence 478899999997 7999999999976544
No 211
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=60.41 E-value=9 Score=27.71 Aligned_cols=24 Identities=25% Similarity=0.296 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+|||++ .++.+.=+|||.+
T Consensus 197 rDikp~Nill~-~~~~vkL~DfG~a 220 (337)
T cd05054 197 RDLAARNILLS-ENNVVKICDFGLA 220 (337)
T ss_pred CCCCcceEEEe-CCCcEEEeccccc
Confidence 68889999998 7899999999965
No 212
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=60.22 E-value=7.2 Score=26.21 Aligned_cols=25 Identities=28% Similarity=0.227 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .++.+.-+||+..-
T Consensus 124 ~dl~p~ni~i~-~~~~~~l~d~g~~~ 148 (256)
T cd05112 124 RDLAARNCLVG-ENQVVKVSDFGMTR 148 (256)
T ss_pred cccccceEEEc-CCCeEEECCCccee
Confidence 68899999997 88999999998654
No 213
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=60.09 E-value=4.9 Score=28.80 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 120 ~dlkp~Nili~-~~~~~kL~Dfg~~~ 144 (329)
T cd05588 120 RDLKLDNVLLD-AEGHIKLTDYGMCK 144 (329)
T ss_pred cCCCHHHeEEC-CCCCEEECcCcccc
Confidence 67889999997 78999999999653
No 214
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=59.91 E-value=6.8 Score=26.61 Aligned_cols=26 Identities=27% Similarity=0.147 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-.|+||+++ .++.+.=+|||.+-
T Consensus 132 H~dl~p~nil~~-~~~~~~l~dfg~~~ 157 (284)
T cd05038 132 HRDLAARNILVE-SEDLVKISDFGLAK 157 (284)
T ss_pred cCCCCHHhEEEc-CCCCEEEccccccc
Confidence 378999999997 77999999998653
No 215
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=59.70 E-value=6.5 Score=28.20 Aligned_cols=26 Identities=31% Similarity=0.370 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+|||++ .+|++.=+|||.+..
T Consensus 126 ~dlkp~Nill~-~~~~~kl~Dfg~~~~ 151 (331)
T cd05597 126 RDIKPDNVLLD-KNGHIRLADFGSCLR 151 (331)
T ss_pred CCCCHHHEEEC-CCCCEEEEECCceee
Confidence 67889999996 889999999997643
No 216
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=59.67 E-value=4.9 Score=27.27 Aligned_cols=26 Identities=27% Similarity=0.309 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .++.+.-+|||.+..
T Consensus 135 ~dl~~~nili~-~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 135 RDIKGQNVLLT-ENAEVKLVDFGVSAQ 160 (272)
T ss_pred CCCCHHHEEEC-CCCCEEEccCCCcee
Confidence 67889999997 889999999997643
No 217
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=59.63 E-value=5.8 Score=28.00 Aligned_cols=29 Identities=31% Similarity=0.255 Sum_probs=24.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-+|=+|+||+++ .+|++.=+|||.+....
T Consensus 126 H~dlkp~nili~-~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 126 HRDLKPSNILVN-SNCDLKICDFGLARGVD 154 (330)
T ss_pred cCCCCHHHEEEc-CCCCEEEcccCceEeec
Confidence 378899999997 77999999999775543
No 218
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=59.43 E-value=6.1 Score=26.74 Aligned_cols=26 Identities=23% Similarity=0.123 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .+|.+.-+|||.+..
T Consensus 130 ~dl~~~nil~~-~~~~~~l~d~g~~~~ 155 (267)
T cd08228 130 RDIKPANVFIT-ATGVVKLGDLGLGRF 155 (267)
T ss_pred CCCCHHHEEEc-CCCCEEECcccccee
Confidence 68899999997 789999999996543
No 219
>PTZ00036 glycogen synthase kinase; Provisional
Probab=59.30 E-value=6.4 Score=29.91 Aligned_cols=26 Identities=27% Similarity=0.197 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++..++.+.=+|||.+-
T Consensus 194 rDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 194 RDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CCcCHHHEEEcCCCCceeeeccccch
Confidence 57789999998777788889999763
No 220
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=59.28 E-value=6.3 Score=26.74 Aligned_cols=26 Identities=35% Similarity=0.323 Sum_probs=22.2
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-+|+||+++ .++.+.=+|||.+-
T Consensus 130 H~dlkp~Nili~-~~~~~kl~dfg~~~ 155 (268)
T cd05063 130 HRDLAARNILVN-SNLECKVSDFGLSR 155 (268)
T ss_pred ccccchhhEEEc-CCCcEEECCCccce
Confidence 378899999997 78999999999764
No 221
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=59.13 E-value=8.2 Score=25.60 Aligned_cols=27 Identities=33% Similarity=0.202 Sum_probs=22.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+||+++ .+|.+.-+|||.+...
T Consensus 129 ~di~p~nili~-~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 129 RDLAARNCLVG-EDLVVKISDFGLSRDV 155 (262)
T ss_pred CccCcceEEEC-CCCcEEEccccccccc
Confidence 68889999997 7799999999876543
No 222
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=59.11 E-value=8 Score=26.74 Aligned_cols=24 Identities=21% Similarity=0.185 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .++++.-+|||.+
T Consensus 133 ~dlkp~nili~-~~~~~kl~Dfg~~ 156 (279)
T cd05111 133 RNLAARNILLK-SDSIVQIADFGVA 156 (279)
T ss_pred cccCcceEEEc-CCCcEEEcCCccc
Confidence 67789999997 7899999999976
No 223
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=58.97 E-value=8.6 Score=26.58 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=23.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|-.|+||+++ .+|.+.=+|||.....
T Consensus 125 H~dl~p~nill~-~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 125 HRDLKPNNLLIA-SDGVLKLADFGLARSF 152 (298)
T ss_pred ecCCChhhEEEc-CCCCEEEccceeeeec
Confidence 378899999997 7899999999977543
No 224
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=58.81 E-value=8.3 Score=26.09 Aligned_cols=24 Identities=33% Similarity=0.353 Sum_probs=19.8
Q ss_pred CCCCCCcEEEEcCCC-----cEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTG-----RCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG-----~v~hiDfg~~ 37 (82)
+|-+|+||+++ .++ .+.-+|||.+
T Consensus 130 ~dl~p~nil~~-~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 130 RDLAARNCLVS-EKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCChheEEEe-cCCCCCCcceEECCcccc
Confidence 78899999997 555 7888999865
No 225
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=58.81 E-value=6.9 Score=25.91 Aligned_cols=28 Identities=25% Similarity=0.180 Sum_probs=23.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-||=+|+||+++ .+|.+.=+||+.+...
T Consensus 126 H~dl~~~nil~~-~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 126 HRDIKPQNIFLT-SNGLVKLGDFGISKVL 153 (258)
T ss_pred cccCChHHeEEc-CCCcEEECCccceeec
Confidence 478899999997 7899999999876443
No 226
>PHA03207 serine/threonine kinase US3; Provisional
Probab=58.72 E-value=5.4 Score=29.48 Aligned_cols=24 Identities=29% Similarity=0.299 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ ..|.+.=+|||.+
T Consensus 209 rDlkp~Nill~-~~~~~~l~DfG~a 232 (392)
T PHA03207 209 RDVKTENIFLD-EPENAVLGDFGAA 232 (392)
T ss_pred cCCCHHHEEEc-CCCCEEEccCccc
Confidence 67789999997 8899999999975
No 227
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=58.71 E-value=8.2 Score=27.14 Aligned_cols=25 Identities=32% Similarity=0.202 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .++.+.=+|||..-
T Consensus 148 ~dlkp~Nili~-~~~~~kl~dfg~~~ 172 (303)
T cd05088 148 RDLAARNILVG-ENYVAKIADFGLSR 172 (303)
T ss_pred cccchheEEec-CCCcEEeCccccCc
Confidence 67789999997 78999999999764
No 228
>PF05191 ADK_lid: Adenylate kinase, active site lid; InterPro: IPR007862 Adenylate kinases (ADK; 2.7.4.3 from EC) are phosphotransferases that catalyse the Mg-dependent reversible conversion of ATP and AMP to two molecules of ADP, an essential reaction for many processes in living cells. In large variants of adenylate kinase, the AMP and ATP substrates are buried in a domain that undergoes conformational changes from an open to a closed state when bound to substrate; the ligand is then contained within a highly specific environment required for catalysis. Adenylate kinase is a 3-domain protein consisting of a large central CORE domain flanked by a LID domain on one side and the AMP-binding NMPbind domain on the other []. The LID domain binds ATP and covers the phosphates at the active site. The substrates first bind the CORE domain, followed by closure of the active site by the LID and NMPbind domains. Comparisons of adenylate kinases have revealed a particular divergence in the active site lid. In some organisms, particularly the Gram-positive bacteria, residues in the lid domain have been mutated to cysteines and these cysteine residues (two CX(n)C motifs) are responsible for the binding of a zinc ion. The bound zinc ion in the lid domain is clearly structurally homologous to Zinc-finger domains. However, it is unclear whether the adenylate kinase lid is a novel zinc-finger DNA/RNA binding domain, or that the lid bound zinc serves a purely structural function [].; GO: 0004017 adenylate kinase activity; PDB: 3BE4_A 2OSB_B 2ORI_A 2EU8_A 3DL0_A 1P3J_A 2QAJ_A 2OO7_A 2P3S_A 3DKV_A ....
Probab=58.65 E-value=6 Score=20.63 Aligned_cols=15 Identities=40% Similarity=0.802 Sum_probs=12.3
Q ss_pred EEcCCCcEEEEeece
Q psy16910 22 VCTKTGRCVGIDFGY 36 (82)
Q Consensus 22 i~~~tG~v~hiDfg~ 36 (82)
+.+..|+++|+.|.+
T Consensus 3 ~C~~Cg~~Yh~~~~p 17 (36)
T PF05191_consen 3 ICPKCGRIYHIEFNP 17 (36)
T ss_dssp EETTTTEEEETTTB-
T ss_pred CcCCCCCccccccCC
Confidence 567899999999975
No 229
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=58.60 E-value=6 Score=27.78 Aligned_cols=26 Identities=27% Similarity=0.353 Sum_probs=22.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-||-+|+||+++ .+|.+.=+|||.+-
T Consensus 138 H~dL~p~Nili~-~~~~~kl~dfg~~~ 163 (296)
T cd06655 138 HRDIKSDNVLLG-MDGSVKLTDFGFCA 163 (296)
T ss_pred cCCCCHHHEEEC-CCCCEEEccCccch
Confidence 488999999997 78999999998653
No 230
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=58.48 E-value=6.2 Score=27.98 Aligned_cols=25 Identities=36% Similarity=0.360 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 122 ~dlkp~Nil~~-~~~~~kL~Dfg~~~ 146 (318)
T cd05582 122 RDLKPENILLD-EEGHIKLTDFGLSK 146 (318)
T ss_pred CCCCHHHeEEC-CCCcEEEeeccCCc
Confidence 67889999997 88999999999654
No 231
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=58.40 E-value=9.3 Score=26.43 Aligned_cols=26 Identities=31% Similarity=0.446 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .++.+.=+|||.+..
T Consensus 119 ~dikp~Nili~-~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 119 RDMKPENVLLD-DQGNCRLSDLGLAVE 144 (277)
T ss_pred ccCChHhEEEc-CCCCEEEeeceeeee
Confidence 67789999997 789999999997643
No 232
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=58.40 E-value=5.7 Score=26.62 Aligned_cols=27 Identities=30% Similarity=0.234 Sum_probs=22.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|-+|+||+++ .+|.+.=+||+.+-.
T Consensus 123 H~~l~~~ni~~~-~~~~~~l~df~~~~~ 149 (264)
T cd06623 123 HRDIKPSNLLIN-SKGEVKIADFGISKV 149 (264)
T ss_pred cCCCCHHHEEEC-CCCCEEEccCcccee
Confidence 368899999997 789999999986543
No 233
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=58.38 E-value=10 Score=26.58 Aligned_cols=26 Identities=27% Similarity=0.280 Sum_probs=22.3
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-+|+||+++ .+|.+.=+|||.+.
T Consensus 138 H~dl~p~nIl~~-~~~~~kL~dfg~~~ 163 (307)
T cd06607 138 HRDIKAGNILLT-EPGTVKLADFGSAS 163 (307)
T ss_pred ecCCCcccEEEC-CCCCEEEeecCcce
Confidence 378899999997 78999999999664
No 234
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=58.29 E-value=5.2 Score=28.46 Aligned_cols=24 Identities=33% Similarity=0.452 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+|||.+
T Consensus 120 ~dlkp~Nill~-~~~~~kl~Dfg~~ 143 (318)
T cd05570 120 RDLKLDNVLLD-SEGHIKIADFGMC 143 (318)
T ss_pred cCCCHHHeEEC-CCCcEEecccCCC
Confidence 67789999997 8899999999965
No 235
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=58.14 E-value=9 Score=26.14 Aligned_cols=25 Identities=32% Similarity=0.357 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ ..|.+.=+|||.+-
T Consensus 126 ~dl~p~Nill~-~~~~~~L~dfg~~~ 150 (262)
T cd05071 126 RDLRAANILVG-ENLVCKVADFGLAR 150 (262)
T ss_pred cccCcccEEEc-CCCcEEeccCCcee
Confidence 67789999997 78999999999764
No 236
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=58.01 E-value=6.7 Score=26.58 Aligned_cols=25 Identities=28% Similarity=0.216 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .++.+.-+|||.+-
T Consensus 119 ~dlkp~nill~-~~~~~kl~Dfg~~~ 143 (257)
T cd05116 119 RDLAARNVLLV-TQHYAKISDFGLSK 143 (257)
T ss_pred cccchhhEEEc-CCCeEEECCCcccc
Confidence 78899999997 68888889998653
No 237
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=57.79 E-value=7.8 Score=26.16 Aligned_cols=25 Identities=24% Similarity=0.218 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++++.=+|||.+-
T Consensus 137 ~dlkp~Nil~~-~~~~~kl~dfg~~~ 161 (273)
T cd05035 137 RDLAARNCMLR-EDMTVCVADFGLSK 161 (273)
T ss_pred cccchheEEEC-CCCeEEECCcccee
Confidence 67889999997 78999999999753
No 238
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=57.74 E-value=8.9 Score=26.22 Aligned_cols=25 Identities=32% Similarity=0.202 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+--+|||.+-
T Consensus 136 ~dikp~nili~-~~~~~kl~dfgl~~ 160 (270)
T cd05047 136 RDLAARNILVG-ENYVAKIADFGLSR 160 (270)
T ss_pred cccccceEEEc-CCCeEEECCCCCcc
Confidence 78889999996 88999999999653
No 239
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=57.59 E-value=7 Score=26.95 Aligned_cols=24 Identities=46% Similarity=0.576 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .+|.+.=+|||..
T Consensus 129 ~dl~p~nil~~-~~~~~~l~dfg~~ 152 (288)
T cd05583 129 RDIKLENILLD-SEGHVVLTDFGLS 152 (288)
T ss_pred cCCCHHHeEEC-CCCCEEEEECccc
Confidence 78899999997 7899999999864
No 240
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=57.57 E-value=5.4 Score=28.42 Aligned_cols=25 Identities=32% Similarity=0.340 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 125 rdlkp~Nill~-~~~~~kL~Dfg~~~ 149 (324)
T cd05589 125 RDLKLDNLLLD-TEGFVKIADFGLCK 149 (324)
T ss_pred cCCCHHHeEEC-CCCcEEeCcccCCc
Confidence 67789999997 78999999999653
No 241
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=57.39 E-value=10 Score=26.42 Aligned_cols=25 Identities=32% Similarity=0.218 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+|||++ .++.+.=+|||...
T Consensus 143 ~dlkp~Nill~-~~~~~kl~dfg~~~ 167 (297)
T cd05089 143 RDLAARNVLVG-ENLASKIADFGLSR 167 (297)
T ss_pred CcCCcceEEEC-CCCeEEECCcCCCc
Confidence 68899999997 78888889999754
No 242
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=57.32 E-value=8.4 Score=26.49 Aligned_cols=25 Identities=24% Similarity=0.133 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+-=+|||.+-
T Consensus 148 ~dlkp~nili~-~~~~~kl~dfg~~~ 172 (283)
T cd05090 148 KDLAARNILIG-EQLHVKISDLGLSR 172 (283)
T ss_pred hccccceEEEc-CCCcEEeccccccc
Confidence 67889999997 78889989999764
No 243
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=57.29 E-value=14 Score=24.91 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=24.2
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-+|-.|+||+++ ..|++.=+||+......
T Consensus 123 h~dl~~~nil~~-~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 123 HRDIKPDNILLD-EQGHVHITDFNIATKVT 151 (258)
T ss_pred ccCCCHHHeEEc-CCCCEEEeecccccccC
Confidence 378899999997 88999999999776543
No 244
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=57.03 E-value=7.1 Score=27.95 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|++.=+|||.+.
T Consensus 126 rDlkp~Nili~-~~~~~kL~DfG~a~ 150 (332)
T cd05623 126 RDIKPDNILMD-MNGHIRLADFGSCL 150 (332)
T ss_pred cCCCHHHEEEC-CCCCEEEeecchhe
Confidence 67789999997 88999999999764
No 245
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=57.01 E-value=11 Score=25.58 Aligned_cols=26 Identities=31% Similarity=0.231 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .++.+.=+|||.+..
T Consensus 126 ~di~p~Nili~-~~~~~~l~dfg~~~~ 151 (260)
T cd05070 126 RDLRSANILVG-DGLVCKIADFGLARL 151 (260)
T ss_pred CCCccceEEEe-CCceEEeCCceeeee
Confidence 67789999997 788898899997743
No 246
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=56.87 E-value=8.1 Score=26.68 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|++.=+|||.+
T Consensus 127 ~dlkp~Nil~~-~~~~~~l~Dfg~~ 150 (291)
T cd07870 127 RDLKPQNLLIS-YLGELKLADFGLA 150 (291)
T ss_pred CCCChHHEEEc-CCCcEEEeccccc
Confidence 68899999997 8899999999965
No 247
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=56.82 E-value=8.5 Score=26.40 Aligned_cols=24 Identities=29% Similarity=0.308 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ ..+++.=+|||.+
T Consensus 133 ~dlkp~Nil~~-~~~~~kL~dfG~~ 156 (279)
T cd05109 133 RDLAARNVLVK-SPNHVKITDFGLA 156 (279)
T ss_pred cccccceEEEc-CCCcEEECCCCce
Confidence 67889999996 7889999999965
No 248
>KOG3087|consensus
Probab=56.63 E-value=12 Score=27.21 Aligned_cols=30 Identities=30% Similarity=0.339 Sum_probs=25.3
Q ss_pred CCCCCCcEEEEcCCCcE--EEEeeceeecccc
Q psy16910 13 GDRHLENTLVCTKTGRC--VGIDFGYSFGVAT 42 (82)
Q Consensus 13 gDRh~~nili~~~tG~v--~hiDfg~~~~~~~ 42 (82)
||=.-+||++....+++ +-||||.++.+..
T Consensus 137 GDLTTSNill~~~~~~~~~~lIdfgls~~s~~ 168 (229)
T KOG3087|consen 137 GDLTTSNILLRSDGNQITPILIDFGLSSVSRL 168 (229)
T ss_pred ccccccceEEecCCCcCceEEEeecchhcccC
Confidence 78889999998888888 8999998776643
No 249
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=56.49 E-value=7.9 Score=26.70 Aligned_cols=25 Identities=28% Similarity=0.189 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||..-
T Consensus 133 ~dlkp~Nil~~-~~~~~~l~dfg~~~ 157 (284)
T cd05079 133 RDLAARNVLVE-SEHQVKIGDFGLTK 157 (284)
T ss_pred cccchheEEEc-CCCCEEECCCcccc
Confidence 68899999997 78999989999653
No 250
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=56.48 E-value=7.7 Score=26.57 Aligned_cols=24 Identities=25% Similarity=0.205 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 143 ~dlkp~Nil~~-~~~~~~l~dfg~~ 166 (277)
T cd05062 143 RDLAARNCMVA-EDFTVKIGDFGMT 166 (277)
T ss_pred CCcchheEEEc-CCCCEEECCCCCc
Confidence 67789999997 7899999999965
No 251
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=56.30 E-value=7.7 Score=26.90 Aligned_cols=25 Identities=28% Similarity=0.317 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 121 ~dlkp~Nili~-~~~~~~l~dfg~~~ 145 (280)
T cd05608 121 RDLKPENVLLD-NDGNVRISDLGLAV 145 (280)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCccce
Confidence 56789999997 78999999999764
No 252
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=56.21 E-value=8.2 Score=25.72 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .+|.+.-+|||.+..
T Consensus 117 ~di~~~nil~~-~~~~~~l~dfg~~~~ 142 (265)
T cd05579 117 RDLKPDNILID-SNGHLKLTDFGLSKV 142 (265)
T ss_pred CCCCHHHeEEc-CCCCEEEEecccchh
Confidence 78899999997 789999999986543
No 253
>KOG0665|consensus
Probab=56.19 E-value=6.5 Score=30.47 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=29.8
Q ss_pred eeeCCC--CCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHH
Q psy16910 10 YSIGDR--HLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILA 61 (82)
Q Consensus 10 lgigDR--h~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~ 61 (82)
.||..| -|+||++. .++.+=-.|||++ ..|.+-||+||=++.
T Consensus 137 ~~IihRdLkPsnivv~-~~~~lKi~dfg~a---------r~e~~~~~mtpyVvt 180 (369)
T KOG0665|consen 137 AGIIHRDLKPSNIVVN-SDCTLKILDFGLA---------RTEDTDFMMTPYVVT 180 (369)
T ss_pred cceeecccCcccceec-chhheeeccchhh---------cccCcccccCchhhe
Confidence 455555 89999994 8888888899853 234445788876553
No 254
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=56.01 E-value=8.9 Score=26.34 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=21.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|-+|+||+++ .+|.+.-+|||..
T Consensus 124 h~dl~p~Ni~i~-~~~~~~l~dfg~~ 148 (277)
T cd06641 124 HRDIKAANVLLS-EHGEVKLADFGVA 148 (277)
T ss_pred cCCCCHHhEEEC-CCCCEEEeecccc
Confidence 478899999997 8899999999854
No 255
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=56.00 E-value=9.5 Score=25.91 Aligned_cols=25 Identities=40% Similarity=0.456 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
||=+|+||+++ .+|.+.-+||+.+-
T Consensus 132 ~dl~~~nil~~-~~~~~~l~d~~~~~ 156 (272)
T cd06629 132 RDLKADNLLVD-ADGICKISDFGISK 156 (272)
T ss_pred cCCChhhEEEc-CCCeEEEeeccccc
Confidence 78899999997 89999999999664
No 256
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=55.93 E-value=6.6 Score=27.60 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=22.3
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-||=+|+||+++ ..|.+.=+|||.+-
T Consensus 139 H~dl~p~Nilv~-~~~~~~l~dfg~~~ 164 (292)
T cd06657 139 HRDIKSDSILLT-HDGRVKLSDFGFCA 164 (292)
T ss_pred cCCCCHHHEEEC-CCCCEEEcccccce
Confidence 489999999997 77899999999653
No 257
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=55.90 E-value=6.4 Score=27.74 Aligned_cols=25 Identities=24% Similarity=0.191 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|.+.=+|||.+-
T Consensus 127 ~dlkp~NIll~-~~~~~kL~Dfg~~~ 151 (338)
T cd07859 127 RDLKPKNILAN-ADCKLKICDFGLAR 151 (338)
T ss_pred CCCCHHHeEEC-CCCcEEEccCcccc
Confidence 67789999997 89999999999753
No 258
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=55.84 E-value=7.7 Score=26.74 Aligned_cols=25 Identities=36% Similarity=0.361 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 119 ~dlkp~Nill~-~~~~~~l~dfg~~~ 143 (279)
T cd06619 119 RDVKPSNMLVN-TRGQVKLCDFGVST 143 (279)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCCcce
Confidence 78899999997 78999999999664
No 259
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=55.75 E-value=7.9 Score=26.07 Aligned_cols=25 Identities=36% Similarity=0.307 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+.
T Consensus 125 ~dl~~~ni~~~-~~~~~~l~d~g~~~ 149 (265)
T cd06605 125 RDVKPSNILVN-SRGQIKLCDFGVSG 149 (265)
T ss_pred CCCCHHHEEEC-CCCCEEEeecccch
Confidence 67889999997 68999999998653
No 260
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=55.69 E-value=11 Score=25.62 Aligned_cols=26 Identities=31% Similarity=0.215 Sum_probs=22.3
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
=+|=+|+||+++ .+|++.=+||+..-
T Consensus 122 H~dl~~~ni~i~-~~~~~~l~d~~~~~ 147 (283)
T cd07830 122 HRDLKPENLLVS-GPEVVKIADFGLAR 147 (283)
T ss_pred cCCCChhhEEEc-CCCCEEEeecccce
Confidence 378899999997 79999999998653
No 261
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=55.65 E-value=6.9 Score=26.99 Aligned_cols=25 Identities=32% Similarity=0.202 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 154 ~dl~p~nil~~-~~~~~~l~dfg~~~ 178 (288)
T cd05050 154 RDLATRNCLVG-ENMVVKIADFGLSR 178 (288)
T ss_pred ccccHhheEec-CCCceEECccccce
Confidence 78899999996 88999999999653
No 262
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=55.45 E-value=8.1 Score=26.34 Aligned_cols=26 Identities=35% Similarity=0.327 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.-+|||.+-.
T Consensus 125 ~dl~p~ni~i~-~~~~~~l~dfg~~~~ 150 (277)
T cd06917 125 RDIKAANILVT-NTGNVKLCDFGVAAL 150 (277)
T ss_pred CCcCHHHEEEc-CCCCEEEccCCceee
Confidence 67789999997 699999999996643
No 263
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=55.28 E-value=8.4 Score=26.39 Aligned_cols=26 Identities=31% Similarity=0.335 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ ..|.+--+|||.+..
T Consensus 148 ~dlkp~nili~-~~~~~kl~dfg~~~~ 173 (286)
T cd06638 148 RDVKGNNILLT-TEGGVKLVDFGVSAQ 173 (286)
T ss_pred cCCCHHhEEEC-CCCCEEEccCCceee
Confidence 67889999997 788899999997643
No 264
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=55.16 E-value=9.4 Score=26.44 Aligned_cols=24 Identities=25% Similarity=0.196 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 143 ~dikp~nili~-~~~~~~L~Dfg~~ 166 (288)
T cd05061 143 RDLAARNCMVA-HDFTVKIGDFGMT 166 (288)
T ss_pred CCCChheEEEc-CCCcEEECcCCcc
Confidence 67789999997 7899999999864
No 265
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=54.75 E-value=8.6 Score=26.79 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+..
T Consensus 126 ~dikp~Nil~~-~~~~~~l~Dfg~~~~ 151 (285)
T cd05630 126 RDLKPENILLD-DHGHIRISDLGLAVH 151 (285)
T ss_pred CCCCHHHEEEC-CCCCEEEeeccceee
Confidence 67789999997 789999999997643
No 266
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=54.74 E-value=9.5 Score=26.01 Aligned_cols=24 Identities=29% Similarity=0.281 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .++.+-=+|||.+
T Consensus 119 ~dlkp~nil~~-~~~~~kl~dfg~~ 142 (257)
T cd05115 119 RDLAARNVLLV-NQHYAKISDFGLS 142 (257)
T ss_pred cccchheEEEc-CCCcEEeccCCcc
Confidence 68899999997 7888888999865
No 267
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=54.69 E-value=11 Score=25.81 Aligned_cols=24 Identities=25% Similarity=0.177 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .++.+.=+|||.+
T Consensus 131 ~dlkp~Nili~-~~~~~~l~dfg~~ 154 (283)
T cd05080 131 RDLAARNVLLD-NDRLVKIGDFGLA 154 (283)
T ss_pred cccChheEEEc-CCCcEEEeecccc
Confidence 67789999997 7789999999965
No 268
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=54.50 E-value=16 Score=25.35 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 121 ~dikp~Nil~~-~~~~~~l~dfg~~~ 145 (279)
T cd05633 121 RDLKPANILLD-EHGHVRISDLGLAC 145 (279)
T ss_pred CCCCHHHEEEC-CCCCEEEccCCcce
Confidence 67789999997 88999999999764
No 269
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=54.32 E-value=8.3 Score=26.51 Aligned_cols=26 Identities=27% Similarity=0.323 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+..
T Consensus 124 ~dlkp~Nill~-~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 124 RDIKPENLLIS-HNDVLKLCDFGFARN 149 (287)
T ss_pred CCCCHHHEEEc-CCCcEEEeeccCccc
Confidence 57789999996 889999999997643
No 270
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=54.27 E-value=8.3 Score=26.40 Aligned_cols=24 Identities=29% Similarity=0.372 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-+|+||+++ .+|.+.=+|||.+
T Consensus 124 ~~l~p~nill~-~~~~~~l~dfg~~ 147 (284)
T cd07860 124 RDLKPQNLLIN-TEGAIKLADFGLA 147 (284)
T ss_pred CCCCHHHEEEC-CCCCEEEeeccch
Confidence 88899999997 8899999999865
No 271
>KOG0599|consensus
Probab=54.20 E-value=9.7 Score=29.42 Aligned_cols=23 Identities=30% Similarity=0.340 Sum_probs=20.5
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|-.|+|||+| .+-++.-.|||++
T Consensus 148 DLKpENILld-dn~~i~isDFGFa 170 (411)
T KOG0599|consen 148 DLKPENILLD-DNMNIKISDFGFA 170 (411)
T ss_pred ccChhheeec-cccceEEecccee
Confidence 5679999998 9999999999975
No 272
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=53.88 E-value=10 Score=25.77 Aligned_cols=24 Identities=38% Similarity=0.362 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .+|.+.=+|||..
T Consensus 124 ~dl~p~nili~-~~~~~kl~d~g~~ 147 (256)
T cd05113 124 RDLAARNCLVD-DQGCVKVSDFGLS 147 (256)
T ss_pred cccCcceEEEc-CCCCEEECCCccc
Confidence 67899999997 7899999999864
No 273
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=53.87 E-value=10 Score=26.62 Aligned_cols=25 Identities=28% Similarity=0.254 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+.=+|||.+.
T Consensus 133 ~dikp~Nill~-~~~~~kL~Dfg~~~ 157 (303)
T cd05110 133 RDLAARNVLVK-SPNHVKITDFGLAR 157 (303)
T ss_pred cccccceeeec-CCCceEEccccccc
Confidence 57789999996 78899999999764
No 274
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=53.70 E-value=10 Score=26.44 Aligned_cols=25 Identities=28% Similarity=0.255 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 161 ~dlkp~Nili~-~~~~~kl~D~g~~~ 185 (304)
T cd05101 161 RDLAARNVLVT-ENNVMKIADFGLAR 185 (304)
T ss_pred cccccceEEEc-CCCcEEECCCccce
Confidence 68889999997 88999999998753
No 275
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=53.54 E-value=8.7 Score=26.32 Aligned_cols=25 Identities=28% Similarity=0.335 Sum_probs=22.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+||+++ .+|++.=+|||.+.
T Consensus 145 ~dl~~~nili~-~~~~~~l~dfg~~~ 169 (282)
T cd06636 145 RDIKGQNVLLT-ENAEVKLVDFGVSA 169 (282)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCcchh
Confidence 78899999997 88999999998754
No 276
>PF14956 DUF4505: Domain of unknown function (DUF4505)
Probab=53.45 E-value=9.5 Score=26.94 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=15.4
Q ss_pred CCCCcEEEEcCCCcEEE
Q psy16910 15 RHLENTLVCTKTGRCVG 31 (82)
Q Consensus 15 Rh~~nili~~~tG~v~h 31 (82)
=.|+++.+++.||+|+|
T Consensus 114 FqPe~L~m~~~sGRvYH 130 (183)
T PF14956_consen 114 FQPEKLCMDPSSGRVYH 130 (183)
T ss_pred cccceEEEcCCCCcEec
Confidence 36999999999999998
No 277
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=53.23 E-value=12 Score=25.61 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+|||++ .+|.+.=+|||...
T Consensus 123 ~dikp~nil~~-~~~~~~l~Dfg~~~ 147 (268)
T cd05086 123 SDLALRNCFLT-SDLTVKVGDYGIGP 147 (268)
T ss_pred cCCccceEEEc-CCccEEeccccccc
Confidence 68889999996 78999999999754
No 278
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=52.99 E-value=7.5 Score=28.03 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=22.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.-+|||.+-.
T Consensus 142 ~dlkp~Nil~~-~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 142 RDLKPSNIVVK-SDCTLKILDFGLART 167 (353)
T ss_pred CCCCHHHEEEC-CCCCEEEccCcccee
Confidence 67889999997 789999999997643
No 279
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=52.96 E-value=11 Score=26.07 Aligned_cols=25 Identities=32% Similarity=0.135 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 144 ~dlkp~Nili~-~~~~~kl~dfg~~~ 168 (288)
T cd05093 144 RDLATRNCLVG-ENLLVKIGDFGMSR 168 (288)
T ss_pred cccCcceEEEc-cCCcEEeccCCccc
Confidence 68889999997 88999999998653
No 280
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=52.89 E-value=12 Score=24.91 Aligned_cols=27 Identities=30% Similarity=0.260 Sum_probs=22.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=+|+||+++ .+|.+.=+|||.+..
T Consensus 122 H~dl~~~ni~~~-~~~~~~l~dfg~~~~ 148 (256)
T cd06612 122 HRDIKAGNILLN-EEGQAKLADFGVSGQ 148 (256)
T ss_pred cCCCCcceEEEC-CCCcEEEcccccchh
Confidence 378899999997 789999999987554
No 281
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=52.72 E-value=15 Score=24.92 Aligned_cols=30 Identities=27% Similarity=0.252 Sum_probs=23.2
Q ss_pred eeeeeCCCCCCcEEEEcC-CC---cEEEEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTK-TG---RCVGIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~-tG---~v~hiDfg~~ 37 (82)
.++.=||=|++|+|+... +| .+.-|||..+
T Consensus 120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~ 153 (196)
T smart00587 120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLS 153 (196)
T ss_pred eEEeeCCCCccceeeccCCCCCccceEEEecccC
Confidence 356669999999999643 34 6999999754
No 282
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=52.66 E-value=8.7 Score=26.22 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=22.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ .+|++.-+|||.+.
T Consensus 123 h~dl~p~ni~~~-~~~~~~l~d~g~~~ 148 (284)
T cd07836 123 HRDLKPQNLLIN-KRGELKLADFGLAR 148 (284)
T ss_pred eCCCCHHHEEEC-CCCcEEEeecchhh
Confidence 478899999997 89999999998764
No 283
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=52.23 E-value=8.9 Score=26.35 Aligned_cols=24 Identities=33% Similarity=0.385 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 132 ~dlkp~Nil~~-~~~~~kl~dfg~~ 155 (288)
T cd06616 132 RDVKPSNILLD-RNGNIKLCDFGIS 155 (288)
T ss_pred cCCCHHHEEEc-cCCcEEEeecchh
Confidence 68899999997 7899999999865
No 284
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=52.22 E-value=7.8 Score=26.52 Aligned_cols=25 Identities=32% Similarity=0.372 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ ..|.+.=+|||.+-
T Consensus 123 ~dl~~~nil~~-~~~~~~l~dfg~~~ 147 (284)
T cd07839 123 RDLKPQNLLIN-KNGELKLADFGLAR 147 (284)
T ss_pred CCCCHHHEEEc-CCCcEEECccchhh
Confidence 77889999997 78999999999653
No 285
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=51.98 E-value=10 Score=25.66 Aligned_cols=25 Identities=36% Similarity=0.393 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+-
T Consensus 126 ~dl~p~ni~i~-~~~~~~l~dfg~~~ 150 (260)
T cd05067 126 RDLRAANILVS-ETLCCKIADFGLAR 150 (260)
T ss_pred ccccHHhEEEc-CCCCEEEccCccee
Confidence 67889999997 88999999998764
No 286
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=51.94 E-value=11 Score=29.29 Aligned_cols=24 Identities=38% Similarity=0.560 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.-+|||.+
T Consensus 167 rDLKP~NILl~-~~~~vkL~DFGls 190 (496)
T PTZ00283 167 RDIKSANILLC-SNGLVKLGDFGFS 190 (496)
T ss_pred CCCCHHHEEEe-CCCCEEEEecccC
Confidence 57789999997 7899999999965
No 287
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=51.90 E-value=8.5 Score=26.98 Aligned_cols=24 Identities=29% Similarity=0.303 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .+|.+.=+|||.+
T Consensus 164 ~dlkp~Nill~-~~~~~kL~dfg~a 187 (307)
T cd05098 164 RDLAARNVLVT-EDNVMKIADFGLA 187 (307)
T ss_pred ccccHHheEEc-CCCcEEECCCccc
Confidence 67889999997 7799999999865
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=51.89 E-value=11 Score=26.08 Aligned_cols=25 Identities=32% Similarity=0.361 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.=+|||.+-
T Consensus 152 ~dlkp~nili~-~~~~~kl~dfg~~~ 176 (291)
T cd06639 152 RDVKGNNILLT-TEGGVKLVDFGVSA 176 (291)
T ss_pred cCCCHHHEEEc-CCCCEEEeecccch
Confidence 68899999996 78899999998653
No 289
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=51.89 E-value=10 Score=26.19 Aligned_cols=24 Identities=33% Similarity=0.170 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .++.+.-+|||.+
T Consensus 146 ~dlkp~nil~~-~~~~~kL~dfg~~ 169 (280)
T cd05092 146 RDLATRNCLVG-QGLVVKIGDFGMS 169 (280)
T ss_pred ccccHhhEEEc-CCCCEEECCCCce
Confidence 68889999997 7899999999965
No 290
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=51.65 E-value=8 Score=26.71 Aligned_cols=26 Identities=27% Similarity=0.244 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ ..|.+.=+||+.+..
T Consensus 139 ~dl~p~nil~~-~~~~~~l~dfg~~~~ 164 (311)
T cd07866 139 RDIKAANILID-NQGILKIADFGLARP 164 (311)
T ss_pred CCCCHHHEEEC-CCCCEEECcCccchh
Confidence 67889999997 889999999987643
No 291
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=51.65 E-value=11 Score=24.91 Aligned_cols=29 Identities=28% Similarity=0.261 Sum_probs=23.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-+|=+|+||+++ .+|.+.=+||+.+....
T Consensus 122 H~dl~p~ni~i~-~~~~~~l~d~~~~~~~~ 150 (254)
T cd06627 122 HRDIKAANILTT-KDGVVKLADFGVATKLN 150 (254)
T ss_pred cCCCCHHHEEEC-CCCCEEEeccccceecC
Confidence 478899999997 68999999999765443
No 292
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=51.56 E-value=9.4 Score=25.87 Aligned_cols=25 Identities=28% Similarity=0.300 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 130 ~dl~p~nill~-~~~~~~l~dfg~~~ 154 (267)
T cd06646 130 RDIKGANILLT-DNGDVKLADFGVAA 154 (267)
T ss_pred cCCCHHHEEEC-CCCCEEECcCccce
Confidence 67789999996 88999999999764
No 293
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=51.51 E-value=12 Score=26.01 Aligned_cols=24 Identities=38% Similarity=0.282 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 154 ~dlkp~Nili~-~~~~~~l~dfg~~ 177 (296)
T cd05095 154 RDLATRNCLVG-KNYTIKIADFGMS 177 (296)
T ss_pred ccCChheEEEc-CCCCEEeccCccc
Confidence 67789999997 7899999999975
No 294
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=51.41 E-value=8.3 Score=26.07 Aligned_cols=24 Identities=38% Similarity=0.308 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .++.+.=+|||.+
T Consensus 130 ~di~p~nil~~-~~~~~~l~dfg~~ 153 (267)
T cd06628 130 RDIKGANILVD-NKGGIKISDFGIS 153 (267)
T ss_pred ccCCHHHEEEc-CCCCEEecccCCC
Confidence 68899999997 8899999999865
No 295
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=51.38 E-value=9.9 Score=26.28 Aligned_cols=24 Identities=33% Similarity=0.349 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ ..+.+.=+|||.+
T Consensus 151 ~dikp~nill~-~~~~~kl~dfg~~ 174 (290)
T cd05045 151 RDLAARNVLVA-EGRKMKISDFGLS 174 (290)
T ss_pred hhhhhheEEEc-CCCcEEecccccc
Confidence 78889999996 7888888899865
No 296
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=51.29 E-value=8.7 Score=27.41 Aligned_cols=26 Identities=31% Similarity=0.230 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ .+|.+.-+|||.+..
T Consensus 131 ~dlkp~Nil~~-~~~~~kl~dfg~~~~ 156 (334)
T cd07855 131 RDLKPSNLLVN-EDCELRIGDFGMARG 156 (334)
T ss_pred CCCCHHHEEEc-CCCcEEeccccccee
Confidence 68889999997 899999999997643
No 297
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=51.11 E-value=12 Score=26.00 Aligned_cols=25 Identities=32% Similarity=0.114 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+.=+|||.+-
T Consensus 147 ~dlkp~Nil~~-~~~~~~l~dfg~a~ 171 (291)
T cd05094 147 RDLATRNCLVG-ANLLVKIGDFGMSR 171 (291)
T ss_pred cccCcceEEEc-cCCcEEECCCCccc
Confidence 68889999997 78899999999653
No 298
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=51.02 E-value=10 Score=26.04 Aligned_cols=25 Identities=32% Similarity=0.246 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||..-
T Consensus 132 ~dlkp~nili~-~~~~~~l~dfg~~~ 156 (284)
T cd05081 132 RDLATRNILVE-SENRVKIGDFGLTK 156 (284)
T ss_pred ccCCHhhEEEC-CCCeEEECCCcccc
Confidence 67889999996 88999999998653
No 299
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=50.99 E-value=8.6 Score=26.03 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=22.2
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 125 H~dl~p~nil~~-~~~~~~l~dfg~~~ 150 (265)
T cd06631 125 HRDIKGNNVMLM-PNGIIKLIDFGCAR 150 (265)
T ss_pred cCCcCHHhEEEC-CCCeEEeccchhhH
Confidence 378899999997 88999999998653
No 300
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=50.99 E-value=9.2 Score=26.76 Aligned_cols=27 Identities=26% Similarity=0.278 Sum_probs=22.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+||+++ .+|.+.-+|||.+...
T Consensus 132 ~dl~p~nil~~-~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 132 RDLKVSNLLLT-DKGCLKIADFGLARTY 158 (309)
T ss_pred CCCCHHHEEEC-CCCCEEECccceeeec
Confidence 67789999997 8899999999976543
No 301
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=50.92 E-value=15 Score=24.98 Aligned_cols=26 Identities=31% Similarity=0.176 Sum_probs=21.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ ..|.+.=+|||..-
T Consensus 130 H~dl~p~nili~-~~~~~~l~d~g~~~ 155 (270)
T cd05056 130 HRDIAARNVLVS-SPDCVKLGDFGLSR 155 (270)
T ss_pred ccccChheEEEe-cCCCeEEccCceee
Confidence 368889999997 78999999998653
No 302
>PF07804 HipA_C: HipA-like C-terminal domain; InterPro: IPR012893 The members of this entry are similar to a region close to the C terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 3AKL_D 3AKJ_B 3AKK_D 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=50.83 E-value=4.8 Score=23.69 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=17.0
Q ss_pred eeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 5 SLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 5 ~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
++.|++|=+|||..|+=+-..++.+ -+.|+|
T Consensus 48 ~fn~ligN~D~H~kN~s~l~~~~~~---~LaP~Y 78 (79)
T PF07804_consen 48 VFNYLIGNTDRHLKNFSFLYDGGGW---RLAPAY 78 (79)
T ss_dssp HHHHHCTBS---CCCSEEEEECCEE---EE--B-
T ss_pred HHHHHHcCCcCCcCCEEEEEcCCeE---EecCCC
Confidence 3567888899999999885554443 355444
No 303
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=50.76 E-value=21 Score=25.93 Aligned_cols=33 Identities=24% Similarity=0.147 Sum_probs=26.8
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
+++.=+|=+|+|++.+ ..|+++=|||-++--.+
T Consensus 153 ~v~cH~Dl~~~N~l~t-~~~~l~LIDWEyAg~~D 185 (269)
T COG0510 153 LVPCHNDLNPGNLLLT-DKGGLFLIDWEYAGLND 185 (269)
T ss_pred eeeecCCCCccceEEc-CCCcEEEEecccCCCcc
Confidence 4566689999999995 67999999998875444
No 304
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=50.74 E-value=12 Score=25.49 Aligned_cols=24 Identities=29% Similarity=0.252 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .++.+.=+|||.+
T Consensus 124 ~dlkp~nil~~-~~~~~kL~dfg~~ 147 (269)
T cd05087 124 SDLALRNCLLT-ADLTVKIGDYGLS 147 (269)
T ss_pred cccCcceEEEc-CCCcEEECCcccc
Confidence 68889999997 7899999999865
No 305
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=50.73 E-value=10 Score=27.25 Aligned_cols=26 Identities=23% Similarity=0.148 Sum_probs=22.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ .+|++.=+|||.+..
T Consensus 141 ~dlkp~NIll~-~~~~~kL~dfg~~~~ 166 (342)
T cd07879 141 RDLKPGNLAVN-EDCELKILDFGLARH 166 (342)
T ss_pred CCCCHHHEEEC-CCCCEEEeeCCCCcC
Confidence 67889999997 789999999996543
No 306
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=50.53 E-value=12 Score=25.16 Aligned_cols=25 Identities=36% Similarity=0.368 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+.=+|||.+-
T Consensus 124 ~dl~p~ni~i~-~~~~~kl~d~g~~~ 148 (256)
T cd05114 124 RDLAARNCLVS-STGVVKVSDFGMTR 148 (256)
T ss_pred cccCcceEEEc-CCCeEEECCCCCcc
Confidence 67789999997 78899999998653
No 307
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=50.45 E-value=9.9 Score=25.69 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||...
T Consensus 130 ~dl~p~nili~-~~~~~~l~dfg~~~ 154 (267)
T cd08229 130 RDIKPANVFIT-ATGVVKLGDLGLGR 154 (267)
T ss_pred CCCCHHHEEEc-CCCCEEECcchhhh
Confidence 78899999997 78999999998653
No 308
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=50.43 E-value=8.6 Score=27.41 Aligned_cols=25 Identities=28% Similarity=0.169 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 129 ~dlkp~Nili~-~~~~~kl~Dfg~a~ 153 (332)
T cd07857 129 RDLKPGNLLVN-ADCELKICDFGLAR 153 (332)
T ss_pred CCCCHHHeEEc-CCCCEEeCcCCCce
Confidence 67789999997 78999999999764
No 309
>PRK11768 serine/threonine protein kinase; Provisional
Probab=50.38 E-value=9.6 Score=27.99 Aligned_cols=28 Identities=25% Similarity=0.058 Sum_probs=21.7
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.+.+-=||=|++||+++ . .+.-|||+.+
T Consensus 195 ~~~liHgD~h~~NvL~~-d--~~~iIDFDd~ 222 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D--GPHFVDLDDA 222 (325)
T ss_pred CccceecCCCchhcccc-C--CcEEEeCCCC
Confidence 45566699999999994 3 4667999965
No 310
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=50.22 E-value=25 Score=24.23 Aligned_cols=26 Identities=31% Similarity=0.309 Sum_probs=22.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|-+|+||+++ .++.+.-+|||.+-
T Consensus 128 H~dl~~~nil~~-~~~~~~l~dfg~~~ 153 (287)
T cd06621 128 HRDIKPSNILLT-RKGQVKLCDFGVSG 153 (287)
T ss_pred cCCCCHHHEEEe-cCCeEEEeeccccc
Confidence 378899999997 78899999999653
No 311
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=49.94 E-value=13 Score=25.31 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .+|.+.=+|||.+
T Consensus 143 ~di~p~nill~-~~~~~kl~dfg~~ 166 (277)
T cd05032 143 RDLAARNCMVA-EDLTVKIGDFGMT 166 (277)
T ss_pred cccChheEEEc-CCCCEEECCcccc
Confidence 67889999997 7899998999865
No 312
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=49.42 E-value=11 Score=26.25 Aligned_cols=26 Identities=27% Similarity=0.245 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=+|+||+++ .++.+.=+|||.+..
T Consensus 126 ~dikp~Nili~-~~~~~kl~Dfg~~~~ 151 (285)
T cd05632 126 RDLKPENILLD-DYGHIRISDLGLAVK 151 (285)
T ss_pred cCCCHHHEEEC-CCCCEEEecCCccee
Confidence 67789999997 778999999997643
No 313
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=49.38 E-value=14 Score=24.88 Aligned_cols=26 Identities=31% Similarity=0.296 Sum_probs=21.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ .++.+--+|||.+-
T Consensus 127 h~dl~~~nilv~-~~~~~kl~d~g~~~ 152 (261)
T cd05148 127 HRDLAARNILVG-EDLVCKVADFGLAR 152 (261)
T ss_pred ccccCcceEEEc-CCceEEEccccchh
Confidence 378899999997 88888888998764
No 314
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=49.36 E-value=9 Score=26.45 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+.-+|||.+.
T Consensus 143 ~dl~p~nil~~-~~~~~kl~dfg~~~ 167 (310)
T cd07865 143 RDMKAANILIT-KDGILKLADFGLAR 167 (310)
T ss_pred cCCCHHHEEEC-CCCcEEECcCCCcc
Confidence 68889999996 88999999999764
No 315
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=49.33 E-value=11 Score=30.41 Aligned_cols=25 Identities=32% Similarity=0.404 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ .+|++.=+|||.+-
T Consensus 128 rDLKP~NILl~-~~g~vkL~DFGls~ 152 (669)
T cd05610 128 RDLKPDNMLIS-NEGHIKLTDFGLSK 152 (669)
T ss_pred CCccHHHEEEc-CCCCEEEEeCCCCc
Confidence 57789999997 78999999999763
No 316
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=49.27 E-value=8.8 Score=27.41 Aligned_cols=26 Identities=23% Similarity=0.101 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ .+|.+.=+|||.+..
T Consensus 130 ~dlkp~Nill~-~~~~~kl~dfg~~~~ 155 (336)
T cd07849 130 RDLKPSNLLLN-TNCDLKICDFGLARI 155 (336)
T ss_pred cCCCHHHEEEC-CCCCEEECcccceee
Confidence 68899999996 889999999997643
No 317
>COG3960 Glyoxylate carboligase [General function prediction only]
Probab=49.20 E-value=19 Score=28.60 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.0
Q ss_pred eeeeeeCC----CCCCcEEEEcCCCcEEEEeece
Q psy16910 7 LLEYSIGD----RHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 7 ~yilgigD----Rh~~nili~~~tG~v~hiDfg~ 36 (82)
-+++|||+ ||-++|-+.++.-+++|+|.-|
T Consensus 272 d~vfgignrwanrhtgsv~vyt~gr~fihvdiep 305 (592)
T COG3960 272 DMVFGIGNRWANRHTGSVEVYTEGRKFIHVDIEP 305 (592)
T ss_pred hheeeccchhhhcccCceeeeecCceEEEEeccc
Confidence 36899996 5778898987777899999754
No 318
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=49.15 E-value=15 Score=25.00 Aligned_cols=25 Identities=36% Similarity=0.476 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+.
T Consensus 124 ~~l~p~ni~~~-~~~~~~l~dfg~~~ 148 (286)
T cd07846 124 RDIKPENILVS-QSGVVKLCDFGFAR 148 (286)
T ss_pred cCCCHHHEEEC-CCCcEEEEeeeeee
Confidence 67889999996 78999999998754
No 319
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=49.14 E-value=12 Score=25.34 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=23.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
=+|=+|+||+++ ..|++.=+|||.+...
T Consensus 137 H~dl~~~nil~~-~~~~~~l~dfg~~~~~ 164 (269)
T cd08528 137 HRDLTPNNIMLG-EDDKVTITDFGLAKQK 164 (269)
T ss_pred ecCCCHHHEEEC-CCCcEEEecccceeec
Confidence 478889999996 8899999999977543
No 320
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=49.11 E-value=13 Score=25.85 Aligned_cols=24 Identities=29% Similarity=0.488 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .+|.+.-+|||..
T Consensus 139 ~dl~p~Nil~~-~~~~~~l~d~g~~ 162 (285)
T cd06648 139 RDIKSDSILLT-SDGRVKLSDFGFC 162 (285)
T ss_pred CCCChhhEEEc-CCCcEEEcccccc
Confidence 78899999997 7899999999854
No 321
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=49.07 E-value=10 Score=26.54 Aligned_cols=24 Identities=29% Similarity=0.473 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ ..|.+.=+|||.+
T Consensus 142 ~dlkp~Nill~-~~~~~kL~dfg~~ 165 (292)
T cd06658 142 RDIKSDSILLT-SDGRIKLSDFGFC 165 (292)
T ss_pred cCCCHHHEEEc-CCCCEEEccCcch
Confidence 88899999997 7799999999965
No 322
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=49.00 E-value=10 Score=27.30 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=23.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|-.|+||+++ .+|++.=+|||.+...
T Consensus 142 ~dlkp~Nill~-~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 142 RDLKPSNIAVN-EDCELKILDFGLARHT 168 (343)
T ss_pred CCCCHHHeEEC-CCCCEEEccccccccc
Confidence 78889999997 7899999999987544
No 323
>KOG0581|consensus
Probab=48.89 E-value=11 Score=29.30 Aligned_cols=24 Identities=38% Similarity=0.379 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|=-|+||||+ +.|+|=-+|||.+
T Consensus 203 RDIKPsNlLvN-skGeVKicDFGVS 226 (364)
T KOG0581|consen 203 RDIKPSNLLVN-SKGEVKICDFGVS 226 (364)
T ss_pred ccCCHHHeeec-cCCCEEecccccc
Confidence 35579999998 8999999999965
No 324
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=48.83 E-value=19 Score=26.56 Aligned_cols=24 Identities=25% Similarity=0.255 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+|||++ .++.+.=+|||.+
T Consensus 236 rDLkp~Nil~~-~~~~~kL~DfGla 259 (374)
T cd05106 236 RDVAARNVLLT-DGRVAKICDFGLA 259 (374)
T ss_pred ccCchheEEEe-CCCeEEEeeceee
Confidence 68889999997 7889999999975
No 325
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=48.80 E-value=23 Score=24.67 Aligned_cols=26 Identities=31% Similarity=0.396 Sum_probs=21.6
Q ss_pred CCCCCCcEEEE---cCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVC---TKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~---~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||++. ..+|.+.-+|||.+-
T Consensus 132 ~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 132 RDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 67889999993 467899999999763
No 326
>KOG0583|consensus
Probab=48.71 E-value=12 Score=28.46 Aligned_cols=26 Identities=35% Similarity=0.316 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
.|=-|+|||+|..+|++--+|||.+=
T Consensus 144 RDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 144 RDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred CCCCHHHEEecCCCCCEEEecccccc
Confidence 45579999999666999999999763
No 327
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=48.52 E-value=10 Score=26.31 Aligned_cols=24 Identities=33% Similarity=0.371 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 139 ~dl~p~nill~-~~~~~kL~dfg~~ 162 (296)
T cd06618 139 RDVKPSNILLD-ASGNVKLCDFGIS 162 (296)
T ss_pred CCCcHHHEEEc-CCCCEEECccccc
Confidence 78899999997 8999999999865
No 328
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=48.52 E-value=10 Score=25.81 Aligned_cols=24 Identities=33% Similarity=0.414 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-+|+||+++ .+|.+.=+|||.+
T Consensus 122 ~dl~p~ni~i~-~~~~~~l~d~g~~ 145 (274)
T cd06609 122 RDIKAANILLS-EEGDVKLADFGVS 145 (274)
T ss_pred CCCCHHHEEEC-CCCCEEEcccccc
Confidence 78899999997 7999999999865
No 329
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=48.16 E-value=13 Score=25.08 Aligned_cols=27 Identities=30% Similarity=0.375 Sum_probs=22.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=+|+||+++ .+|.+.=+||+..-.
T Consensus 116 h~dl~~~nilv~-~~~~~~l~df~~~~~ 142 (262)
T cd05572 116 YRDLKPENLLLD-SNGYVKLVDFGFAKK 142 (262)
T ss_pred cCCCCHHHEEEc-CCCCEEEeeCCcccc
Confidence 478889999997 789999999987543
No 330
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=48.06 E-value=12 Score=26.31 Aligned_cols=25 Identities=24% Similarity=0.187 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .++.+.-+|||.+-
T Consensus 165 ~dlkp~Nil~~-~~~~~~l~dfg~~~ 189 (302)
T cd05055 165 RDLAARNVLLT-HGKIVKICDFGLAR 189 (302)
T ss_pred hhhccceEEEc-CCCeEEECCCcccc
Confidence 68899999997 78888889999653
No 331
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=47.99 E-value=12 Score=25.29 Aligned_cols=24 Identities=21% Similarity=0.092 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.-+||+.+
T Consensus 109 ~dlkp~Nil~~-~~~~~~l~df~~~ 132 (237)
T cd05576 109 RDLNPNNILLD-DRGHIQLTYFSRW 132 (237)
T ss_pred cCCCHHHEEEc-CCCCEEEecccch
Confidence 68889999997 7899999999843
No 332
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=47.91 E-value=12 Score=25.41 Aligned_cols=26 Identities=31% Similarity=0.286 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 129 H~dlkp~nili~-~~~~~~l~dfg~~~ 154 (267)
T cd06645 129 HRDIKGANILLT-DNGHVKLADFGVSA 154 (267)
T ss_pred cCCCCHHHEEEC-CCCCEEECcceeee
Confidence 367789999996 88999999999764
No 333
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=47.88 E-value=20 Score=25.75 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .++.+.-+|||.+-
T Consensus 203 ~dikp~Nil~~-~~~~~kl~dfg~~~ 227 (343)
T cd05103 203 RDLAARNILLS-ENNVVKICDFGLAR 227 (343)
T ss_pred CCCccCeEEEc-CCCcEEEEeccccc
Confidence 67789999997 78999999999653
No 334
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=47.73 E-value=10 Score=25.70 Aligned_cols=25 Identities=32% Similarity=0.147 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||..-
T Consensus 130 ~dl~p~nil~~-~~~~~~l~Dfg~~~ 154 (265)
T cd06652 130 RDIKGANILRD-SVGNVKLGDFGASK 154 (265)
T ss_pred CCCCHHHEEec-CCCCEEECcCcccc
Confidence 78899999996 88999999998653
No 335
>PHA03209 serine/threonine kinase US3; Provisional
Probab=47.63 E-value=11 Score=27.34 Aligned_cols=24 Identities=21% Similarity=0.230 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ ..+.+.-+|||.+
T Consensus 181 rDlkp~Nill~-~~~~~kl~DfG~a 204 (357)
T PHA03209 181 RDVKTENIFIN-DVDQVCIGDLGAA 204 (357)
T ss_pred CCCCHHHEEEC-CCCCEEEecCccc
Confidence 67789999997 8899999999975
No 336
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=47.42 E-value=18 Score=24.41 Aligned_cols=24 Identities=29% Similarity=0.321 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+||+.+
T Consensus 119 ~di~p~nili~-~~~~~kl~df~~~ 142 (257)
T cd05060 119 RDLAARNVLLV-NRHQAKISDFGMS 142 (257)
T ss_pred cCcccceEEEc-CCCcEEecccccc
Confidence 67889999996 8899999999864
No 337
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=47.31 E-value=13 Score=25.31 Aligned_cols=24 Identities=33% Similarity=0.462 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ ..|.+.=+|||.+
T Consensus 128 ~dlkp~nil~~-~~~~~kl~dfg~~ 151 (283)
T cd06617 128 RDVKPSNVLIN-RNGQVKLCDFGIS 151 (283)
T ss_pred CCCCHHHEEEC-CCCCEEEeecccc
Confidence 78899999997 7899999999864
No 338
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=47.11 E-value=20 Score=27.25 Aligned_cols=44 Identities=23% Similarity=0.172 Sum_probs=33.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhh
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVN 63 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~ 63 (82)
||=.+-||+++ .+|.++-|||=-+-..+ .+..++.|-+++.+++
T Consensus 226 GDlSefNIlV~-~dg~~~vIDwPQ~v~~~------hp~a~e~l~RDv~nii 269 (304)
T COG0478 226 GDLSEFNILVT-EDGDIVVIDWPQAVPIS------HPDAEELLERDVENII 269 (304)
T ss_pred cCCchheEEEe-cCCCEEEEeCcccccCC------CCCHHHHHHhHHHHHH
Confidence 78889999996 89999999994222211 4556888888888775
No 339
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=47.09 E-value=14 Score=25.89 Aligned_cols=25 Identities=28% Similarity=0.411 Sum_probs=21.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|-.|+||+++ .+|.+.=+|||.+
T Consensus 140 H~dl~p~Nill~-~~~~~kL~dfg~~ 164 (297)
T cd06659 140 HRDIKSDSILLT-LDGRVKLSDFGFC 164 (297)
T ss_pred cCCCCHHHeEEc-cCCcEEEeechhH
Confidence 378899999997 8899999999965
No 340
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=46.98 E-value=20 Score=28.71 Aligned_cols=50 Identities=20% Similarity=0.166 Sum_probs=33.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc-----------ccC-CCCCCCCCceeecHHHHHhhC
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV-----------ATQ-LLPIPELMPFRLTPHILAVNE 64 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~-----------~~~-~~~~~E~vPFRLT~~~~~~~g 64 (82)
-|=|.+||+|+ .|+|.-|||..+=-. +.+ .|.-.|..-|++=+.|..++-
T Consensus 346 rnlt~~niLId--~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~ 407 (488)
T COG5072 346 RNLTLDNILID--EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLK 407 (488)
T ss_pred ccccccceeee--cCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhc
Confidence 35588999997 999999999876111 111 223345667777777776654
No 341
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=46.71 E-value=11 Score=25.89 Aligned_cols=25 Identities=28% Similarity=0.309 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 119 ~di~p~Nil~~-~~~~~~l~dfg~~~ 143 (277)
T cd05577 119 RDLKPENVLLD-DHGNVRISDLGLAV 143 (277)
T ss_pred CCCCHHHEEEC-CCCCEEEccCcchh
Confidence 67789999997 88999999998654
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=46.62 E-value=13 Score=25.65 Aligned_cols=25 Identities=44% Similarity=0.517 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||.+-
T Consensus 129 ~dl~p~nil~~-~~~~~kl~dfg~~~ 153 (290)
T cd05613 129 RDIKLENILLD-SNGHVVLTDFGLSK 153 (290)
T ss_pred cCCCHHHeEEC-CCCCEEEeeCccce
Confidence 67789999997 78999999998653
No 343
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=46.62 E-value=18 Score=27.23 Aligned_cols=25 Identities=36% Similarity=0.361 Sum_probs=19.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
||=||+|++++-.+.-+--|||+.+
T Consensus 202 ~D~~~~NVl~d~~~~~~g~iDFdDa 226 (331)
T COG2334 202 GDLHPDNVLFDDDTDVSGFIDFDDA 226 (331)
T ss_pred cCCCccceeEcCCCCeeeEEEcccc
Confidence 7999999999744432556899876
No 344
>PHA03210 serine/threonine kinase US3; Provisional
Probab=46.55 E-value=13 Score=28.91 Aligned_cols=24 Identities=38% Similarity=0.447 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ ..|.+.=+|||.+
T Consensus 291 rDLKP~NILl~-~~~~vkL~DFGla 314 (501)
T PHA03210 291 RDIKLENIFLN-CDGKIVLGDFGTA 314 (501)
T ss_pred CCCCHHHEEEC-CCCCEEEEeCCCc
Confidence 57789999997 8899999999976
No 345
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=46.41 E-value=16 Score=25.02 Aligned_cols=24 Identities=29% Similarity=0.289 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ ..+.+.=+|||.+
T Consensus 133 ~di~p~nil~~-~~~~~kL~dfg~~ 156 (279)
T cd05057 133 RDLAARNVLVK-TPQHVKITDFGLA 156 (279)
T ss_pred cccCcceEEEc-CCCeEEECCCccc
Confidence 68899999996 8889998999865
No 346
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=46.33 E-value=13 Score=23.97 Aligned_cols=29 Identities=28% Similarity=0.291 Sum_probs=23.8
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeeccc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~~ 41 (82)
-||=.|+||+++ ..|.+.-+||+......
T Consensus 110 h~~i~~~ni~~~-~~~~~~l~d~~~~~~~~ 138 (244)
T smart00220 110 HRDLKPENILLD-EDGHVKLADFGLARQLD 138 (244)
T ss_pred cCCcCHHHeEEC-CCCcEEEccccceeeec
Confidence 378889999997 67999999999876544
No 347
>PHA03211 serine/threonine kinase US3; Provisional
Probab=46.32 E-value=11 Score=29.19 Aligned_cols=24 Identities=33% Similarity=0.261 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .+|.+.=+|||.+
T Consensus 284 rDLKP~NILl~-~~~~vkL~DFGla 307 (461)
T PHA03211 284 RDIKTENVLVN-GPEDICLGDFGAA 307 (461)
T ss_pred CcCCHHHEEEC-CCCCEEEcccCCc
Confidence 67789999997 8899999999965
No 348
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=46.09 E-value=15 Score=25.01 Aligned_cols=24 Identities=38% Similarity=0.392 Sum_probs=20.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=+|+||+++ .++.+.-+|||..
T Consensus 130 ~dl~p~nili~-~~~~~kl~dfg~~ 153 (269)
T cd05065 130 RDLAARNILVN-SNLVCKVSDFGLS 153 (269)
T ss_pred cccChheEEEc-CCCcEEECCCccc
Confidence 68899999997 7888888999865
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=46.04 E-value=16 Score=26.05 Aligned_cols=25 Identities=28% Similarity=0.259 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-.|+||+++ .+|.+--+|||.+.
T Consensus 131 ~dl~p~nill~-~~~~~kl~d~g~~~ 155 (337)
T cd07852 131 RDLKPSNILLN-SDCRVKLADFGLAR 155 (337)
T ss_pred CCCCHHHEEEc-CCCcEEEeeccchh
Confidence 68899999997 88999999998664
No 350
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=45.98 E-value=11 Score=25.88 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+-.
T Consensus 127 ~dl~p~nil~~-~~~~~kl~dfg~~~~ 152 (291)
T cd07844 127 RDLKPQNLLIS-ERGELKLADFGLARA 152 (291)
T ss_pred ccCCHHHEEEc-CCCCEEECccccccc
Confidence 67789999997 889999999997643
No 351
>KOG0696|consensus
Probab=45.84 E-value=16 Score=29.73 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
.|-.++|+|+| ..|+|--.|||++=+
T Consensus 474 RDLKLDNvmLd-~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 474 RDLKLDNVMLD-SEGHIKIADFGMCKE 499 (683)
T ss_pred eeccccceEec-cCCceEeeecccccc
Confidence 36678999998 999999999998743
No 352
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=45.79 E-value=19 Score=25.44 Aligned_cols=25 Identities=28% Similarity=0.343 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ ..|.+.=+|||.+.
T Consensus 149 ~dL~p~Nil~~-~~~~~kl~dfg~~~ 173 (317)
T cd06635 149 RDIKAGNILLT-EPGQVKLADFGSAS 173 (317)
T ss_pred CCCCcccEEEC-CCCCEEEecCCCcc
Confidence 78899999996 78999999998654
No 353
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=45.76 E-value=17 Score=24.41 Aligned_cols=25 Identities=20% Similarity=0.166 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 122 ~dlk~~nili~-~~~~~kl~dfg~~~ 146 (262)
T cd05058 122 RDLAARNCMLD-ESFTVKVADFGLAR 146 (262)
T ss_pred cccCcceEEEc-CCCcEEECCccccc
Confidence 56789999997 78888889999653
No 354
>PRK05618 50S ribosomal protein L25/general stress protein Ctc; Reviewed
Probab=45.29 E-value=17 Score=25.36 Aligned_cols=31 Identities=10% Similarity=0.107 Sum_probs=20.3
Q ss_pred EEcCCCcEEEEeeceeeccccCCCCCCCCCceeec
Q psy16910 22 VCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLT 56 (82)
Q Consensus 22 i~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT 56 (82)
.|.-++++.|+||-. ...+. .+.=.||.+++
T Consensus 81 ~~pv~~~i~HvDF~~-v~~~~---~v~v~VPv~~~ 111 (197)
T PRK05618 81 RHPVKDFILHVDFLR-VDAGE---KVKVEVPVHFV 111 (197)
T ss_pred eccCCCCEEeEEEEE-eCCCC---EEEEEeeEEEE
Confidence 378899999999973 22222 22335687776
No 355
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=45.29 E-value=17 Score=23.45 Aligned_cols=28 Identities=29% Similarity=0.221 Sum_probs=22.7
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|=+|+||+++ .++++.-+||+.....
T Consensus 121 h~di~~~ni~v~-~~~~~~l~d~g~~~~~ 148 (225)
T smart00221 121 HRDLKPENILLG-MDGLVKLADFGLARFI 148 (225)
T ss_pred cCCCCHHHEEEc-CCCCEEEeeCceeeEe
Confidence 367889999997 6699999999966443
No 356
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=45.10 E-value=15 Score=18.15 Aligned_cols=17 Identities=18% Similarity=0.075 Sum_probs=13.1
Q ss_pred EcCCCcEEEEeeceeec
Q psy16910 23 CTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 23 ~~~tG~v~hiDfg~~~~ 39 (82)
.+++-.++|.||...|+
T Consensus 11 ~psdksi~hwdf~~l~g 27 (28)
T PRK14751 11 NPSDKSIYHWDFYALLG 27 (28)
T ss_pred CCCcCceeeeeehhhhc
Confidence 46778899999976554
No 357
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=45.04 E-value=16 Score=26.36 Aligned_cols=29 Identities=21% Similarity=0.071 Sum_probs=23.4
Q ss_pred eeeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 8 LEYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 8 yilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
..+.=||=+++|+|++ .+|.+.-|||-.+
T Consensus 196 ~~lcHgD~~~~Nvl~~-~~~~~~iIDfd~~ 224 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYD-ETRGGYFINFEKA 224 (309)
T ss_pred eeeeCCCCcHHhEEEc-CCCCEEEEEhhhc
Confidence 3455699999999997 7788888998754
No 358
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=44.88 E-value=14 Score=24.84 Aligned_cols=25 Identities=40% Similarity=0.400 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
||=+|+||+++ .++.+.=+|||..-
T Consensus 121 ~dl~p~nil~~-~~~~~~l~dfg~~~ 145 (260)
T cd05611 121 RDIKPENLLID-QTGHLKLTDFGLSR 145 (260)
T ss_pred CCCCHHHeEEC-CCCcEEEeecccce
Confidence 67789999997 78999999998653
No 359
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=44.86 E-value=15 Score=25.26 Aligned_cols=26 Identities=31% Similarity=0.441 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=+|+||+++ .+|.+.=+||+...
T Consensus 139 H~dl~p~ni~i~-~~~~~~l~d~~~~~ 164 (286)
T cd06614 139 HRDIKSDNILLS-KDGSVKLADFGFAA 164 (286)
T ss_pred eCCCChhhEEEc-CCCCEEECccchhh
Confidence 378899999997 89999999998654
No 360
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=44.78 E-value=13 Score=26.60 Aligned_cols=26 Identities=23% Similarity=0.141 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|-.|+||+++ .+|.+.=+|||.+..
T Consensus 132 ~dl~p~Nili~-~~~~~~l~dfg~~~~ 157 (328)
T cd07856 132 RDLKPSNILIN-ENCDLKICDFGLARI 157 (328)
T ss_pred CCCCHHHEeEC-CCCCEEeCccccccc
Confidence 67789999997 789999999997643
No 361
>KOG0670|consensus
Probab=44.73 E-value=17 Score=30.27 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=25.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCce
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPF 53 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPF 53 (82)
.|=-|+|||++...--+--+|||.+...+. .|..|+
T Consensus 560 aDIKPDNiLVNE~k~iLKLCDfGSA~~~~e-----neitPY 595 (752)
T KOG0670|consen 560 ADIKPDNILVNESKNILKLCDFGSASFASE-----NEITPY 595 (752)
T ss_pred cccCccceEeccCcceeeeccCcccccccc-----ccccHH
Confidence 367899999987766777889996544442 455565
No 362
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=44.69 E-value=15 Score=25.04 Aligned_cols=24 Identities=33% Similarity=0.353 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|++.-+|||..
T Consensus 127 ~dl~p~nili~-~~~~~~l~d~g~~ 150 (280)
T cd06611 127 RDLKAGNILLT-LDGDVKLADFGVS 150 (280)
T ss_pred CCCChhhEEEC-CCCCEEEccCccc
Confidence 78899999996 8899999999854
No 363
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=44.49 E-value=11 Score=26.21 Aligned_cols=26 Identities=27% Similarity=0.144 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcC----CCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTK----TGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~----tG~v~hiDfg~~~ 38 (82)
-+|-.|+||+++ . +|.+.=+|||.+.
T Consensus 131 h~dlkp~Nil~~-~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 131 HRDLKPANILVM-GEGPERGVVKIGDLGLAR 160 (316)
T ss_pred eCCCCHHHEEEc-CCCCccceEEECCCcccc
Confidence 378899999997 6 8999999999654
No 364
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=44.25 E-value=12 Score=26.50 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+||+++ ..|.+.-+|||.+-
T Consensus 143 ~dl~~~nill~-~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 143 RDLSPANIFIN-SKGICKIADFGLAR 167 (335)
T ss_pred ccccHHHeEEC-CCCCEEECCcccee
Confidence 78899999997 88999999999763
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=44.17 E-value=22 Score=24.05 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
||=+|+||+++ ..|.+.=+|||.+..
T Consensus 122 ~~l~~~ni~~~-~~~~~~l~d~g~~~~ 147 (282)
T cd07829 122 RDLKPQNILIN-RDGVLKLADFGLARA 147 (282)
T ss_pred CCCChheEEEc-CCCCEEEecCCcccc
Confidence 78899999997 689999999987643
No 366
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=44.01 E-value=19 Score=25.38 Aligned_cols=25 Identities=28% Similarity=0.248 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||.+-
T Consensus 158 ~dlkp~Nill~-~~~~~kL~Dfg~~~ 182 (314)
T cd05099 158 RDLAARNVLVT-EDNVMKIADFGLAR 182 (314)
T ss_pred ccccceeEEEc-CCCcEEEccccccc
Confidence 67789999996 78999999999764
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=43.82 E-value=17 Score=26.23 Aligned_cols=25 Identities=24% Similarity=0.173 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+-
T Consensus 142 ~dlkp~Nill~-~~~~~kl~dfg~~~ 166 (343)
T cd07880 142 RDLKPGNLAVN-EDCELKILDFGLAR 166 (343)
T ss_pred CCCCHHHEEEc-CCCCEEEeeccccc
Confidence 67789999997 78999999999654
No 368
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=43.81 E-value=17 Score=25.56 Aligned_cols=25 Identities=28% Similarity=0.234 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ ..+.+.=+|||.+-
T Consensus 133 ~dlkp~Nill~-~~~~~kl~DfG~a~ 157 (316)
T cd05108 133 RDLAARNVLVK-TPQHVKITDFGLAK 157 (316)
T ss_pred cccchhheEec-CCCcEEEccccccc
Confidence 67789999996 78899999999763
No 369
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=43.66 E-value=18 Score=24.89 Aligned_cols=24 Identities=38% Similarity=0.282 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ ..+.+.=+|||.+
T Consensus 154 ~dlkp~Nili~-~~~~~~l~dfg~~ 177 (296)
T cd05051 154 RDLATRNCLVG-KNYTIKIADFGMS 177 (296)
T ss_pred cccchhceeec-CCCceEEccccce
Confidence 57789999997 7799999999965
No 370
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=43.59 E-value=19 Score=24.09 Aligned_cols=25 Identities=28% Similarity=0.287 Sum_probs=21.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .++.+.=+||+..-
T Consensus 125 ~~l~~~nil~~-~~~~~~l~d~~~~~ 149 (256)
T cd08218 125 RDIKSQNIFLT-KDGTIKLGDFGIAR 149 (256)
T ss_pred CCCCHHHEEEc-CCCCEEEeecccee
Confidence 67889999997 78899999998664
No 371
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=43.36 E-value=18 Score=25.50 Aligned_cols=24 Identities=38% Similarity=0.376 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||..
T Consensus 124 ~dl~p~nil~~-~~~~~~l~dfg~~ 147 (308)
T cd06615 124 RDVKPSNILVN-SRGEIKLCDFGVS 147 (308)
T ss_pred CCCChHHEEEe-cCCcEEEccCCCc
Confidence 67889999997 7899999999864
No 372
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=43.22 E-value=16 Score=25.19 Aligned_cols=28 Identities=25% Similarity=0.188 Sum_probs=22.9
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-+|=.|+||+++ ..|.+.=+|||.+...
T Consensus 129 H~dl~p~nili~-~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 129 HRDLKTSNLLLN-NRGILKICDFGLAREY 156 (293)
T ss_pred eccCCHHHEEEC-CCCcEEEeecCceeec
Confidence 378889999997 7899999999866543
No 373
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=43.14 E-value=18 Score=24.65 Aligned_cols=25 Identities=36% Similarity=0.452 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+-
T Consensus 124 ~dl~~~ni~~~-~~~~~kl~d~g~~~ 148 (288)
T cd07833 124 RDIKPENILVS-ESGVLKLCDFGFAR 148 (288)
T ss_pred CCCCHHHeEEC-CCCCEEEEeeeccc
Confidence 77899999997 79999999998653
No 374
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=42.91 E-value=26 Score=24.53 Aligned_cols=26 Identities=31% Similarity=0.396 Sum_probs=21.2
Q ss_pred CCCCCCcEEEE---cCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVC---TKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~---~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ ..+|.+-=+|||.+-
T Consensus 132 rDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 132 RDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 57789999994 467899999999763
No 375
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=42.78 E-value=21 Score=24.54 Aligned_cols=26 Identities=31% Similarity=0.312 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++...+++.=+|||.+-
T Consensus 133 ~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 133 NDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CCCCHHHEEEeCCCCeEEEecCccce
Confidence 67789999998555599999999653
No 376
>KOG0694|consensus
Probab=42.77 E-value=15 Score=30.70 Aligned_cols=23 Identities=35% Similarity=0.486 Sum_probs=21.0
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|=-++|||+| ..|.+--+|||.|
T Consensus 493 DlKLdNiLLD-~eGh~kiADFGlc 515 (694)
T KOG0694|consen 493 DLKLDNLLLD-TEGHVKIADFGLC 515 (694)
T ss_pred ecchhheEEc-ccCcEEecccccc
Confidence 5678999999 9999999999987
No 377
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=42.52 E-value=19 Score=28.62 Aligned_cols=25 Identities=40% Similarity=0.456 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|-+|+|||++ .++.+.-+|||.+.
T Consensus 333 rDLKp~NILl~-~~~~~kL~DFGla~ 357 (507)
T PLN03224 333 RDIKPENLLVT-VDGQVKIIDFGAAV 357 (507)
T ss_pred CCCchHhEEEC-CCCcEEEEeCcCcc
Confidence 67899999997 77899999999763
No 378
>PF15232 DUF4585: Domain of unknown function (DUF4585)
Probab=42.27 E-value=29 Score=21.22 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=16.7
Q ss_pred CCCcEEEEcCCCcEEEEee
Q psy16910 16 HLENTLVCTKTGRCVGIDF 34 (82)
Q Consensus 16 h~~nili~~~tG~v~hiDf 34 (82)
+..++|+|..||+-+-+|.
T Consensus 6 tqrKvL~DP~SG~Yy~vd~ 24 (75)
T PF15232_consen 6 TQRKVLQDPESGQYYVVDA 24 (75)
T ss_pred cCccEeecCCCCCEEEEec
Confidence 4568999999999999996
No 379
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=42.23 E-value=14 Score=25.84 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.1
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ .+|.+.=+|||.+.
T Consensus 139 H~dLkp~Nill~-~~~~~kl~dfg~~~ 164 (296)
T cd06654 139 HRDIKSDNILLG-MDGSVKLTDFGFCA 164 (296)
T ss_pred cCCCCHHHEEEc-CCCCEEECccccch
Confidence 378889999997 78999999999654
No 380
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=42.10 E-value=19 Score=24.80 Aligned_cols=25 Identities=28% Similarity=0.224 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.=+|||.+-
T Consensus 156 ~dlkp~Nil~~-~~~~~kL~Dfg~~~ 180 (293)
T cd05053 156 RDLAARNVLVT-EDHVMKIADFGLAR 180 (293)
T ss_pred cccceeeEEEc-CCCeEEeCcccccc
Confidence 57789999997 89999999998654
No 381
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=41.59 E-value=14 Score=26.57 Aligned_cols=25 Identities=24% Similarity=0.154 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++..++.+.-+|||.+
T Consensus 138 ~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 138 RDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred CCCCHHHEEEcCCCceEEECCcccc
Confidence 5678999999877888888999865
No 382
>PRK10593 hypothetical protein; Provisional
Probab=41.28 E-value=25 Score=25.52 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=19.6
Q ss_pred eeeCCCCCCcEEEEcCCCc-EEEEeec
Q psy16910 10 YSIGDRHLENTLVCTKTGR-CVGIDFG 35 (82)
Q Consensus 10 lgigDRh~~nili~~~tG~-v~hiDfg 35 (82)
|-=||=|++|++++..+|+ ..-||..
T Consensus 195 LlHGDlw~gNvl~~~~~~~i~~liDPa 221 (297)
T PRK10593 195 LVHGNFTLRSMLKDPRSDQLLAMLNPG 221 (297)
T ss_pred eEeCCCCcccEEECCCCCceEEEECch
Confidence 3448999999999866676 5667765
No 383
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=41.27 E-value=20 Score=25.85 Aligned_cols=27 Identities=22% Similarity=0.155 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=.|+||+++ .+|.+.=+|||.+...
T Consensus 144 ~dlkp~NIll~-~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 144 RDLKPSNLAVN-EDCELKILDFGLARHT 170 (345)
T ss_pred cCCChHHEEEc-CCCCEEEecccccccc
Confidence 57789999997 7899999999976543
No 384
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=41.08 E-value=22 Score=24.06 Aligned_cols=26 Identities=31% Similarity=0.305 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ ..|.+.-+||+.+..
T Consensus 126 ~dl~p~ni~i~-~~~~~~l~d~~~~~~ 151 (260)
T cd05073 126 RDLRAANILVS-ASLVCKIADFGLARV 151 (260)
T ss_pred cccCcceEEEc-CCCcEEECCCcceee
Confidence 67789999996 789999999987643
No 385
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=41.04 E-value=20 Score=24.28 Aligned_cols=24 Identities=29% Similarity=0.187 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++. |.+-=+|||.+-
T Consensus 124 ~dl~p~ni~l~~--~~~kl~dfg~~~ 147 (282)
T cd07831 124 RDIKPENILIKD--DILKLADFGSCR 147 (282)
T ss_pred cccCHHHEEEcC--CCeEEEeccccc
Confidence 678999999985 999999998764
No 386
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=40.95 E-value=22 Score=24.18 Aligned_cols=24 Identities=33% Similarity=0.135 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ ..|.+-=+|||.+
T Consensus 146 ~dlkp~nili~-~~~~~kl~d~g~~ 169 (280)
T cd05049 146 RDLATRNCLVG-YDLVVKIGDFGMS 169 (280)
T ss_pred cccccceEEEc-CCCeEEECCcccc
Confidence 67789999997 7799999999865
No 387
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=40.94 E-value=15 Score=26.23 Aligned_cols=27 Identities=22% Similarity=0.133 Sum_probs=22.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|-.|+||+++ .+|.+.=+|||.+...
T Consensus 132 ~dlkp~Nil~~-~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 132 RDLKPSNLLLN-ANCDLKICDFGLARTT 158 (337)
T ss_pred CCCCHHHEEEc-CCCCEEECcCcccccc
Confidence 78899999996 7899999999976543
No 388
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=40.83 E-value=18 Score=24.22 Aligned_cols=25 Identities=32% Similarity=0.331 Sum_probs=21.4
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-+|=.|+||+++ .+|.+.=+||+.+
T Consensus 125 h~~l~p~ni~~~-~~~~~~l~df~~~ 149 (267)
T cd06610 125 HRDIKAGNILLG-EDGSVKIADFGVS 149 (267)
T ss_pred cCCCCHHhEEEc-CCCCEEEcccchH
Confidence 378899999997 6899999999865
No 389
>PF15535 Toxin_57: Putative toxin 57
Probab=40.60 E-value=16 Score=22.43 Aligned_cols=15 Identities=27% Similarity=0.020 Sum_probs=12.5
Q ss_pred EEEcCCCcEEEEeec
Q psy16910 21 LVCTKTGRCVGIDFG 35 (82)
Q Consensus 21 li~~~tG~v~hiDfg 35 (82)
-++.+||+++|+|--
T Consensus 35 w~d~~tG~~~~pd~~ 49 (77)
T PF15535_consen 35 WIDPKTGNQWHPDGP 49 (77)
T ss_pred cccCCCCceeeeCCC
Confidence 367899999999965
No 390
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=40.57 E-value=14 Score=25.06 Aligned_cols=24 Identities=33% Similarity=0.207 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|.+.=+|||.+
T Consensus 130 ~dl~p~ni~i~-~~~~~~l~dfg~~ 153 (264)
T cd06653 130 RDIKGANILRD-SAGNVKLGDFGAS 153 (264)
T ss_pred CCCCHHHEEEc-CCCCEEECccccc
Confidence 67889999997 7899988999865
No 391
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=39.78 E-value=21 Score=24.42 Aligned_cols=24 Identities=25% Similarity=0.128 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .++.+-=+|||.+
T Consensus 148 ~dlkp~Nil~~-~~~~~kl~Dfg~~ 171 (283)
T cd05091 148 KDLATRNVLVF-DKLNVKISDLGLF 171 (283)
T ss_pred cccchhheEec-CCCceEecccccc
Confidence 67789999996 7889999999964
No 392
>PRK06148 hypothetical protein; Provisional
Probab=39.74 E-value=27 Score=30.02 Aligned_cols=26 Identities=35% Similarity=0.330 Sum_probs=20.1
Q ss_pred CCCCCCcEEEEcCC-CcEE-EEeeceee
Q psy16910 13 GDRHLENTLVCTKT-GRCV-GIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~t-G~v~-hiDfg~~~ 38 (82)
||=|++||+++... +++. -|||+.+.
T Consensus 208 gDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 208 NDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred CCCCcccEEEcCCCCcceEEEEECcccc
Confidence 78899999998443 2676 89999763
No 393
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=39.57 E-value=28 Score=25.58 Aligned_cols=25 Identities=24% Similarity=0.174 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ ..+.+--+|||.+-
T Consensus 238 ~Dlkp~Nill~-~~~~~kl~DfG~a~ 262 (375)
T cd05104 238 RDLAARNILLT-HGRITKICDFGLAR 262 (375)
T ss_pred cCCchhhEEEE-CCCcEEEecCccce
Confidence 67789999997 67888888999753
No 394
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=39.42 E-value=19 Score=24.95 Aligned_cols=26 Identities=27% Similarity=0.249 Sum_probs=21.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+..
T Consensus 126 ~dlkp~Nil~~-~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 126 RDLKPENILLD-DYGHIRISDLGLAVE 151 (285)
T ss_pred cCCCHHHEEEC-CCCCEEEeeCCCcee
Confidence 57789999997 789999999997644
No 395
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=39.23 E-value=16 Score=25.22 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=21.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+.-+|||.+.
T Consensus 121 ~di~p~nili~-~~~~~kl~dfg~~~ 145 (278)
T cd05606 121 RDLKPANILLD-EHGHVRISDLGLAC 145 (278)
T ss_pred CCCCHHHEEEC-CCCCEEEccCcCcc
Confidence 67789999997 78999999999753
No 396
>KOG1165|consensus
Probab=39.19 E-value=34 Score=27.09 Aligned_cols=25 Identities=28% Similarity=0.306 Sum_probs=18.1
Q ss_pred CCCCCCcEEEEcC----CCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTK----TGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~----tG~v~hiDfg~~ 37 (82)
-|--|+|+||.+. -..|.-||||.+
T Consensus 148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 148 RDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred cccCccceeecCCCCCCCceEEEEeccch
Confidence 4678999999532 334666899976
No 397
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=38.83 E-value=20 Score=25.27 Aligned_cols=26 Identities=27% Similarity=0.190 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+|||.+..
T Consensus 139 ~dl~p~nil~~-~~~~~kl~dfg~~~~ 164 (308)
T cd06634 139 RDVKAGNILLS-EPGLVKLGDFGSASI 164 (308)
T ss_pred CCCCHHhEEEC-CCCcEEECCccccee
Confidence 78889999996 789999999997644
No 398
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=38.78 E-value=18 Score=24.07 Aligned_cols=27 Identities=26% Similarity=0.091 Sum_probs=20.6
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++...+.+-=+||+..-
T Consensus 124 h~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (256)
T cd08220 124 HRDLKTQNILLDKHKMVVKIGDFGISK 150 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEEccCCCce
Confidence 367889999998666666678998654
No 399
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=38.69 E-value=24 Score=27.33 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=21.2
Q ss_pred eeeeCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 9 EYSIGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 9 ilgigDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
.|--||=|++|||++ . ....-||+-+++-
T Consensus 193 ~llHGDl~~gNi~~~-~-~~~~~iD~e~~~~ 221 (370)
T TIGR01767 193 TLLHGDLHSGSIFVS-E-HETKVIDPEFAFY 221 (370)
T ss_pred eeeeccCCcccEEEc-C-CCCEEEcCccccc
Confidence 345699999999995 3 3467899875543
No 400
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=38.60 E-value=18 Score=24.16 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|-.|+||+++ .+|.+.=+|||.....
T Consensus 123 ~dl~~~nil~~-~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 123 RDIKPANIFLD-HNGVIKLGDFGCAVKL 149 (264)
T ss_pred CCCCHHHEEEC-CCCCEEEccccccccc
Confidence 67789999997 6999999999876443
No 401
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=38.59 E-value=27 Score=30.21 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ ..|++.=+|||.+-
T Consensus 137 RDLKPeNILLd-~dg~vKLiDFGLAk 161 (932)
T PRK13184 137 RDLKPDNILLG-LFGEVVILDWGAAI 161 (932)
T ss_pred cCCchheEEEc-CCCCEEEEecCcce
Confidence 57789999997 88999999999764
No 402
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=37.69 E-value=28 Score=24.62 Aligned_cols=26 Identities=27% Similarity=0.316 Sum_probs=22.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+.=+||+.+..
T Consensus 145 ~dl~p~nili~-~~~~~kL~dfg~~~~ 170 (313)
T cd06633 145 RDIKAGNILLT-EPGQVKLADFGSASK 170 (313)
T ss_pred CCCChhhEEEC-CCCCEEEeecCCCcc
Confidence 78889999996 889999999987643
No 403
>KOG0585|consensus
Probab=37.68 E-value=29 Score=28.44 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=23.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
+|=-|+|+|++ .+|.|=-.|||.+...
T Consensus 234 RDIKPsNLLl~-~~g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 234 RDIKPSNLLLS-SDGTVKISDFGVSNEF 260 (576)
T ss_pred cccchhheEEc-CCCcEEeeccceeeec
Confidence 46689999997 8899999999998754
No 404
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=37.59 E-value=35 Score=23.75 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+--.||+.+.
T Consensus 125 ~dlk~~Nili~-~~~~~kl~d~~~~~ 149 (314)
T cd08216 125 RSVKASHILLS-GDGKVVLSGLRYSV 149 (314)
T ss_pred CCCCcceEEEe-cCCceEEecCccce
Confidence 78899999997 78999888998653
No 405
>KOG4750|consensus
Probab=37.54 E-value=13 Score=27.49 Aligned_cols=12 Identities=50% Similarity=0.886 Sum_probs=8.9
Q ss_pred eeCCCCC---CcEEE
Q psy16910 11 SIGDRHL---ENTLV 22 (82)
Q Consensus 11 gigDRh~---~nili 22 (82)
++||||| +|.+|
T Consensus 195 ~~gdrhP~Igd~vli 209 (269)
T KOG4750|consen 195 GSGDRHPKIGDNVLI 209 (269)
T ss_pred cccccCCcccCCeEE
Confidence 6899999 34555
No 406
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=37.52 E-value=27 Score=24.82 Aligned_cols=25 Identities=28% Similarity=0.248 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .++.+.=+|||.+-
T Consensus 158 ~dlkp~Nill~-~~~~~kL~Dfg~~~ 182 (334)
T cd05100 158 RDLAARNVLVT-EDNVMKIADFGLAR 182 (334)
T ss_pred cccccceEEEc-CCCcEEECCcccce
Confidence 57779999997 78899989998653
No 407
>KOG4714|consensus
Probab=37.46 E-value=29 Score=26.36 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=19.3
Q ss_pred CCCCCcEEEEcCCCcEEEEeec
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg 35 (82)
-..|+|++.....|.+||+|=.
T Consensus 233 pk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 233 PKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred CCCchheeEecCCCcEEEEcCC
Confidence 3468999999999999999976
No 408
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=37.37 E-value=29 Score=23.13 Aligned_cols=26 Identities=27% Similarity=0.203 Sum_probs=20.1
Q ss_pred CCCCCCcEEEEcCCC-------cEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTG-------RCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG-------~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ ..+ .+-=+|||....
T Consensus 125 ~dlkp~Nill~-~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 125 GNVCGKNILVA-RYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred ccCccceEEEe-cCccccCCceeEEeCCCCcccc
Confidence 67889999998 444 577889986544
No 409
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=36.91 E-value=29 Score=23.18 Aligned_cols=27 Identities=30% Similarity=0.133 Sum_probs=22.0
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=.|+||+++ ..+.+-=+||+.+..
T Consensus 124 h~dl~p~ni~~~-~~~~~kl~d~~~~~~ 150 (256)
T cd08221 124 HRDIKTLNIFLT-KAGLIKLGDFGISKI 150 (256)
T ss_pred ccCCChHhEEEe-CCCCEEECcCcceEE
Confidence 367789999997 788898899987643
No 410
>KOG0690|consensus
Probab=35.96 E-value=19 Score=28.47 Aligned_cols=24 Identities=42% Similarity=0.497 Sum_probs=21.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|-.++|+|+| ++|++--.|||.|
T Consensus 292 RDlKLENLlLD-kDGHIKitDFGLC 315 (516)
T KOG0690|consen 292 RDLKLENLLLD-KDGHIKITDFGLC 315 (516)
T ss_pred eechhhhheec-cCCceEeeecccc
Confidence 36678999998 9999999999987
No 411
>KOG0667|consensus
Probab=35.93 E-value=26 Score=28.81 Aligned_cols=25 Identities=44% Similarity=0.440 Sum_probs=20.6
Q ss_pred CCCCCCcEEE-EcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLV-CTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili-~~~tG~v~hiDfg~~ 37 (82)
.|=-|+|||+ +...-+|==||||.+
T Consensus 313 cDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 313 CDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ccCChhheeeccCCcCceeEEecccc
Confidence 5788999999 556668999999975
No 412
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=35.52 E-value=21 Score=24.25 Aligned_cols=24 Identities=33% Similarity=0.207 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .++++.=+|||..
T Consensus 130 ~~l~p~nil~~-~~~~~~l~dfg~~ 153 (266)
T cd06651 130 RDIKGANILRD-SAGNVKLGDFGAS 153 (266)
T ss_pred CCCCHHHEEEC-CCCCEEEccCCCc
Confidence 67889999997 8899999999864
No 413
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=35.48 E-value=25 Score=23.33 Aligned_cols=26 Identities=31% Similarity=0.234 Sum_probs=21.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
+|=.|+||+++ .+|.+-=+||+.+..
T Consensus 126 ~dl~~~ni~~~-~~~~~kl~d~~~~~~ 151 (258)
T cd06632 126 RDIKGANILVD-TNGVVKLADFGMAKQ 151 (258)
T ss_pred CCCCHHHEEEC-CCCCEEEccCcccee
Confidence 67889999997 789999999986643
No 414
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=35.15 E-value=24 Score=23.76 Aligned_cols=28 Identities=25% Similarity=0.138 Sum_probs=21.3
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
-+|=.|+||+++.....+.=+||+.+..
T Consensus 126 H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 126 HRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred cCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 3788899999974445688889987643
No 415
>KOG0611|consensus
Probab=35.02 E-value=29 Score=28.27 Aligned_cols=23 Identities=39% Similarity=0.459 Sum_probs=20.1
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|-.++|||+| .++++--.|||.+
T Consensus 178 DLKLENILLD-~N~NiKIADFGLS 200 (668)
T KOG0611|consen 178 DLKLENILLD-QNNNIKIADFGLS 200 (668)
T ss_pred ccchhheeec-CCCCeeeeccchh
Confidence 4467999998 9999999999976
No 416
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=34.96 E-value=23 Score=25.05 Aligned_cols=29 Identities=31% Similarity=0.313 Sum_probs=22.4
Q ss_pred eeeeCCCCCCcEEEEcC-CC---cEEEEeecee
Q psy16910 9 EYSIGDRHLENTLVCTK-TG---RCVGIDFGYS 37 (82)
Q Consensus 9 ilgigDRh~~nili~~~-tG---~v~hiDfg~~ 37 (82)
+|.=||=|.+|||+... .| ++.-|||-.+
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~ 248 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLA 248 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccc
Confidence 56669999999999654 34 6999999643
No 417
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=34.94 E-value=33 Score=28.09 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=21.2
Q ss_pred eeCCCCCCcEEEEcCCCcEEEEeec
Q psy16910 11 SIGDRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~hiDfg 35 (82)
.+||-.++|+|++ ++++|.-+|--
T Consensus 139 ~vGDVn~~~~lVs-d~~~V~LVdsD 162 (637)
T COG4248 139 VVGDVNQNSFLVS-DDSKVVLVDSD 162 (637)
T ss_pred cccccCccceeee-cCceEEEEccc
Confidence 4799999999997 99999999854
No 418
>KOG1167|consensus
Probab=34.91 E-value=24 Score=27.88 Aligned_cols=25 Identities=36% Similarity=0.389 Sum_probs=22.9
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
|=-|+|+|.++.|++-.-+|||...
T Consensus 157 DiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 157 DIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred CCCccccccccccCCceEEechhHH
Confidence 4579999999999999999999887
No 419
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=34.81 E-value=28 Score=23.51 Aligned_cols=24 Identities=25% Similarity=0.285 Sum_probs=20.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .++.+.=+|||..
T Consensus 137 ~dikp~nili~-~~~~~kl~dfg~~ 160 (273)
T cd05074 137 RDLAARNCMLN-ENMTVCVADFGLS 160 (273)
T ss_pred cccchhhEEEc-CCCCEEECccccc
Confidence 56779999996 7899998899854
No 420
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=34.42 E-value=35 Score=26.48 Aligned_cols=28 Identities=25% Similarity=0.317 Sum_probs=22.0
Q ss_pred eeeeCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 9 EYSIGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 9 ilgigDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
.|-=||=|++|||+. . +.+.-||+-+++
T Consensus 224 ~l~HgDl~~gni~~~-~-~~~~viD~E~a~ 251 (401)
T PRK09550 224 ALLHGDLHTGSIFVT-E-EETKVIDPEFAF 251 (401)
T ss_pred ceeeccCCcccEEee-C-CCcEEEeccccc
Confidence 466799999999995 3 368889997554
No 421
>KOG2464|consensus
Probab=34.39 E-value=38 Score=24.10 Aligned_cols=16 Identities=50% Similarity=0.594 Sum_probs=13.0
Q ss_pred eeCCCCCCcEEEEcCCC
Q psy16910 11 SIGDRHLENTLVCTKTG 27 (82)
Q Consensus 11 gigDRh~~nili~~~tG 27 (82)
.--|.|++||||+ +||
T Consensus 160 ~hrdl~~gnili~-k~~ 175 (246)
T KOG2464|consen 160 EHRDLHLGNILIK-KTG 175 (246)
T ss_pred cccccCcCcEEEe-ccc
Confidence 4468999999996 766
No 422
>PRK10345 hypothetical protein; Provisional
Probab=34.21 E-value=34 Score=23.83 Aligned_cols=24 Identities=17% Similarity=-0.168 Sum_probs=18.1
Q ss_pred eCCCCCCcEEEEcCC---CcEEEEeec
Q psy16910 12 IGDRHLENTLVCTKT---GRCVGIDFG 35 (82)
Q Consensus 12 igDRh~~nili~~~t---G~v~hiDfg 35 (82)
-.|=.|+|||+++.+ +++.=||++
T Consensus 128 hrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 128 TMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred ecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 357789999998533 479999943
No 423
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=34.16 E-value=22 Score=24.54 Aligned_cols=25 Identities=28% Similarity=0.335 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=+|+||+++ .+|.+.=+|||.+-
T Consensus 140 ~dl~p~nili~-~~~~~kl~dfg~~~ 164 (302)
T cd07864 140 RDIKCSNILLN-NKGQIKLADFGLAR 164 (302)
T ss_pred CCCCHHHEEEC-CCCcEEeCcccccc
Confidence 67889999996 88999999998653
No 424
>TIGR00731 ctc_TL5 ribosomal protein L25, Ctc-form. The C-terminal domain of sll1824, an apparent L25 of Synechocystis PCC6803, matches the N-terminal domain of this family. Examples of L25 and Ctc are not separated by a UPGMA tree built on the region of shared homology.
Probab=33.77 E-value=27 Score=23.96 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=25.0
Q ss_pred CcEEE-----EcCCCcEEEEeeceeeccccCCCCCCCCCceeecHH
Q psy16910 18 ENTLV-----CTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPH 58 (82)
Q Consensus 18 ~nili-----~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~ 58 (82)
.+.++ |.-++++.|+||--. ..+. .+.=.||.+++-.
T Consensus 66 ~~vlikevQ~~pv~~~i~HvDF~~v-~~~~---~v~v~VPv~~~G~ 107 (176)
T TIGR00731 66 FKVLVKDYQYNPVTNEVIHVDFLEV-VEGV---KLKVEVPIKLIGT 107 (176)
T ss_pred EEEEEehhhhccCCCCeEEEEeEEe-CCCC---EEEEEeeEEEecc
Confidence 35666 778999999999743 3332 2334679998854
No 425
>PTZ00284 protein kinase; Provisional
Probab=33.59 E-value=41 Score=25.48 Aligned_cols=25 Identities=32% Similarity=0.254 Sum_probs=18.4
Q ss_pred CCCCCCcEEEEcCCC----------------cEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTG----------------RCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG----------------~v~hiDfg~~~ 38 (82)
+|=.|+|||++. .| ++-=+|||.+.
T Consensus 256 rDlKP~NILl~~-~~~~~~~~~~~~~~~~~~~vkl~DfG~~~ 296 (467)
T PTZ00284 256 TDLKPENILMET-SDTVVDPVTNRALPPDPCRVRICDLGGCC 296 (467)
T ss_pred CCCCHHHEEEec-CCcccccccccccCCCCceEEECCCCccc
Confidence 566799999974 33 47778999654
No 426
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=33.33 E-value=38 Score=23.14 Aligned_cols=25 Identities=24% Similarity=0.280 Sum_probs=18.4
Q ss_pred CCCCCCcEEEEcCCCc-------EEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGR-------CVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~-------v~hiDfg~~~ 38 (82)
+|-.|+|||++ .+|. +.-+|||...
T Consensus 129 ~dlkp~Nill~-~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 129 GNVCTKNILLA-REGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred CCCCcccEEEe-cCCccCCCCceeEeCCCCCCc
Confidence 67789999997 4443 6778888653
No 427
>KOG1163|consensus
Probab=33.02 E-value=41 Score=25.64 Aligned_cols=44 Identities=23% Similarity=0.360 Sum_probs=29.3
Q ss_pred CCCCCCcEEE--EcCCCcEEEEeeceeeccccCCCCC--CCCCceeecHHHH
Q psy16910 13 GDRHLENTLV--CTKTGRCVGIDFGYSFGVATQLLPI--PELMPFRLTPHIL 60 (82)
Q Consensus 13 gDRh~~nili--~~~tG~v~hiDfg~~~~~~~~~~~~--~E~vPFRLT~~~~ 60 (82)
-|=-|+|.|. .+-..+++-||||.+ ++.... .--+|+|=.+++.
T Consensus 135 RDIKPdNFLMGlgrh~~kl~LIDFGLa----Kky~d~~t~~HIpyre~r~lt 182 (341)
T KOG1163|consen 135 RDIKPDNFLMGLGRHCNKLYLIDFGLA----KKYRDIRTRQHIPYREDRNLT 182 (341)
T ss_pred ccCCccceeeccccccceEEEEeccch----hhhccccccccCccccCCccc
Confidence 3667999997 666789999999853 332222 3346888766653
No 428
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=32.94 E-value=25 Score=24.20 Aligned_cols=25 Identities=36% Similarity=0.302 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|++.=+|||.+.
T Consensus 128 ~dl~p~nil~~-~~~~~~l~d~gl~~ 152 (284)
T cd06620 128 RDIKPSNILVN-SRGQIKLCDFGVSG 152 (284)
T ss_pred cCCCHHHEEEC-CCCcEEEccCCccc
Confidence 67789999997 88999999999653
No 429
>KOG4250|consensus
Probab=32.86 E-value=40 Score=28.51 Aligned_cols=24 Identities=25% Similarity=0.369 Sum_probs=20.2
Q ss_pred CCCCCcEEEEcCC-CcEEE--Eeecee
Q psy16910 14 DRHLENTLVCTKT-GRCVG--IDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~t-G~v~h--iDfg~~ 37 (82)
|=-|+|||+-..+ |+.+| +|||.+
T Consensus 145 DlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 145 DLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred cCCCCcEEEeecCCCceEEeeeccccc
Confidence 5579999997777 99887 899975
No 430
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=32.75 E-value=35 Score=23.34 Aligned_cols=25 Identities=28% Similarity=0.264 Sum_probs=19.0
Q ss_pred CCCCCCcEEEEcCCC---cEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTG---RCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG---~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+| .+.=+|||.+.
T Consensus 140 ~dlkp~nil~~-~~~~~~~~kl~dfg~~~ 167 (277)
T cd05036 140 RDIAARNCLLT-CKGPGRVAKIADFGMAR 167 (277)
T ss_pred cccchheEEEe-ccCCCcceEeccCcccc
Confidence 68899999997 443 46778998654
No 431
>PHA02988 hypothetical protein; Provisional
Probab=31.06 E-value=33 Score=23.96 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=20.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|--|+||+++ .+|.+-=+|||.+
T Consensus 147 rdlkp~nill~-~~~~~kl~dfg~~ 170 (283)
T PHA02988 147 KNLTSVSFLVT-ENYKLKIICHGLE 170 (283)
T ss_pred CcCChhhEEEC-CCCcEEEcccchH
Confidence 56668999997 7899999999865
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=30.83 E-value=39 Score=25.15 Aligned_cols=30 Identities=30% Similarity=0.280 Sum_probs=21.6
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeeccccC
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGVATQ 43 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~~~~ 43 (82)
||=.|+|++++ .+|.++=-||+.....+..
T Consensus 169 gdi~~~nfll~-~~G~v~Lg~F~~~~r~g~~ 198 (288)
T PF14531_consen 169 GDIKPENFLLD-QDGGVFLGDFSSLVRAGTR 198 (288)
T ss_dssp ST-SGGGEEE--TTS-EEE--GGGEEETTEE
T ss_pred cccceeeEEEc-CCCCEEEcChHHHeecCce
Confidence 78889999998 7899999999998877753
No 433
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=30.65 E-value=32 Score=23.42 Aligned_cols=24 Identities=17% Similarity=0.016 Sum_probs=20.2
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .++.+-=.|||..
T Consensus 131 ~dikp~nili~-~~~~~~l~dfg~~ 154 (266)
T cd05064 131 KGLAAHKVLVN-SDLVCKISGFRRL 154 (266)
T ss_pred ccccHhhEEEc-CCCcEEECCCccc
Confidence 67789999997 7888888899854
No 434
>PRK12396 5-methylribose kinase; Reviewed
Probab=29.45 E-value=38 Score=26.60 Aligned_cols=24 Identities=25% Similarity=0.302 Sum_probs=16.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
=||=|++|||++... +.=||.-++
T Consensus 231 HGDlHtGSI~v~~~~--~kvIDpEFA 254 (409)
T PRK12396 231 HGDLHTGSVFVKNDS--TKVIDPEFA 254 (409)
T ss_pred cCcCCCCCEEecCCc--eEEEccccc
Confidence 489999999997543 444564433
No 435
>KOG0597|consensus
Probab=28.93 E-value=37 Score=28.67 Aligned_cols=49 Identities=29% Similarity=0.359 Sum_probs=33.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec-----------cccCCCCCCC---CCceeecHHHHHh
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG-----------VATQLLPIPE---LMPFRLTPHILAV 62 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~-----------~~~~~~~~~E---~vPFRLT~~~~~~ 62 (82)
-|=.|+|||++ ..|.+--+|||.+=. ++++.+.-|| .-||-.|.++..+
T Consensus 124 rd~kPqniLl~-~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWsl 186 (808)
T KOG0597|consen 124 RDMKPQNILLE-KGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSL 186 (808)
T ss_pred ccCCcceeeec-CCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHH
Confidence 36679999997 889999999987622 2334455454 3467777666653
No 436
>KOG0662|consensus
Probab=28.68 E-value=46 Score=24.40 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=20.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|-.|+|++|+ .+|++--.|||.+
T Consensus 125 rdlkpqnllin-~ngelkladfgla 148 (292)
T KOG0662|consen 125 RDLKPQNLLIN-RNGELKLADFGLA 148 (292)
T ss_pred ccCCcceEEec-cCCcEEecccchh
Confidence 36679999997 9999999999864
No 437
>KOG0659|consensus
Probab=28.45 E-value=47 Score=25.33 Aligned_cols=24 Identities=29% Similarity=0.411 Sum_probs=21.0
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
-|=-|.|+||+ ++|.+=-.|||.+
T Consensus 125 RDlKPnNLLis-~~g~lKiADFGLA 148 (318)
T KOG0659|consen 125 RDLKPNNLLIS-SDGQLKIADFGLA 148 (318)
T ss_pred ccCCccceEEc-CCCcEEeecccch
Confidence 36679999997 9999999999965
No 438
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=27.98 E-value=54 Score=24.69 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=20.5
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+|||++ .++.+.-+|||.+
T Consensus 261 ~dikp~Nill~-~~~~~kL~DfGla 284 (400)
T cd05105 261 RDLAARNVLLA-QGKIVKICDFGLA 284 (400)
T ss_pred CCCChHhEEEe-CCCEEEEEeCCcc
Confidence 67789999997 7888888999865
No 439
>PF14435 SUKH-4: SUKH-4 immunity protein
Probab=27.84 E-value=73 Score=21.07 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=20.2
Q ss_pred eeCCCC-CCcEEEEcCCCcEEEEeece
Q psy16910 11 SIGDRH-LENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 11 gigDRh-~~nili~~~tG~v~hiDfg~ 36 (82)
-+|.-- .+-|.|+..||+|+.+|..-
T Consensus 79 vlG~~~~~~~i~ld~~tG~V~~~~~~~ 105 (179)
T PF14435_consen 79 VLGSDGSGGSICLDPATGAVYALDPDE 105 (179)
T ss_pred EEEEcCCCCeEEEECCCCeEEEecCCc
Confidence 344444 77799999999999999874
No 440
>KOG0986|consensus
Probab=27.80 E-value=45 Score=27.34 Aligned_cols=27 Identities=26% Similarity=0.311 Sum_probs=22.7
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeecc
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFGV 40 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~~ 40 (82)
-|=-|+|||+| ..|+|=-.|+|.+-+-
T Consensus 311 RDLKPeNILLD-d~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 311 RDLKPENILLD-DHGHVRISDLGLAVEI 337 (591)
T ss_pred ccCChhheeec-cCCCeEeeccceEEec
Confidence 36679999999 9999999999976543
No 441
>KOG4645|consensus
Probab=27.76 E-value=73 Score=29.12 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=32.5
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCC
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEP 65 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~ 65 (82)
|=-|.||+++ .+|-+=..|||.+.--. +..|.+| ++++..||.
T Consensus 1359 DIK~aNI~Ld-~~g~iK~~DFGsa~ki~----~~~~~~~----~el~~~~GT 1401 (1509)
T KOG4645|consen 1359 DIKPANILLD-FNGLIKYGDFGSAVKIK----NNAQTMP----GELQSMMGT 1401 (1509)
T ss_pred CCCccceeee-cCCcEEeecccceeEec----CchhcCC----HHHHhhcCC
Confidence 5568999998 89999999999654444 3356667 788887775
No 442
>PF11720 Inhibitor_I78: Peptidase inhibitor I78 family; InterPro: IPR021719 This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78.
Probab=27.75 E-value=56 Score=18.44 Aligned_cols=16 Identities=25% Similarity=0.268 Sum_probs=12.0
Q ss_pred cEEEEcCCCcEEEEeec
Q psy16910 19 NTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 19 nili~~~tG~v~hiDfg 35 (82)
||.+| .+|.|..+..|
T Consensus 45 nv~~D-~~g~I~~v~CG 60 (60)
T PF11720_consen 45 NVEVD-DDGVITRVRCG 60 (60)
T ss_pred EEEEC-CCCcEEEEecC
Confidence 67777 67888887664
No 443
>COG4499 Predicted membrane protein [Function unknown]
Probab=27.47 E-value=65 Score=25.60 Aligned_cols=27 Identities=19% Similarity=-0.017 Sum_probs=19.1
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeec
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg 35 (82)
|+-.++++ ||+||+++ ..+..+-+-+|
T Consensus 103 ~tr~~~~l-----aPeNilf~-~~l~p~~vH~G 129 (434)
T COG4499 103 NTRYTFFL-----APENILFD-GGLTPFFVHRG 129 (434)
T ss_pred ccceeEEe-----cchheEEc-CCCceEEEecc
Confidence 45555555 79999997 66777766665
No 444
>PRK06149 hypothetical protein; Provisional
Probab=27.07 E-value=54 Score=28.07 Aligned_cols=25 Identities=32% Similarity=0.278 Sum_probs=19.2
Q ss_pred CCCCCCcEEEEcCC-CcE---EEEeecee
Q psy16910 13 GDRHLENTLVCTKT-GRC---VGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~t-G~v---~hiDfg~~ 37 (82)
||=|++||+++..+ |+. --||||.+
T Consensus 213 ~Dl~~~Nilv~~~~~~~~~v~giIDFgD~ 241 (972)
T PRK06149 213 LDITDDNVVGSRDADGRWQPDGVIDFGDL 241 (972)
T ss_pred CCCCcccEEEcCCCCCCcceeEEEEcccc
Confidence 78899999998543 443 56999976
No 445
>COG1871 CheD Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms]
Probab=27.06 E-value=62 Score=22.51 Aligned_cols=19 Identities=21% Similarity=0.160 Sum_probs=17.3
Q ss_pred eCCCCCCcEEEEcCCCcEE
Q psy16910 12 IGDRHLENTLVCTKTGRCV 30 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~ 30 (82)
+|..|+.+|.+++.||+++
T Consensus 135 ~Gg~~gR~i~F~p~tG~v~ 153 (164)
T COG1871 135 TGGDSGRTIEFNPSTGRVR 153 (164)
T ss_pred hCCCCCcEEEEecCCCcEE
Confidence 5788999999999999987
No 446
>PF03975 CheD: CheD chemotactic sensory transduction; InterPro: IPR005659 CheD deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the cheA kinase []. CheC is a CheY-P phosphatase (CheY controls flagellar rotation and is activated by phosphorylation). The activity of CheC is enhanced by its interaction with CheD, forming a CheC-CheD heterodimer. It is suggested that CheC exerts its effect on MCP methylation in Bacillus subtilis by controlling the binding of CheD to the MCPs [].; GO: 0050568 protein-glutamine glutaminase activity, 0006935 chemotaxis; PDB: 2F9Z_D.
Probab=26.98 E-value=53 Score=20.76 Aligned_cols=21 Identities=14% Similarity=0.086 Sum_probs=16.5
Q ss_pred eeCCCCCCcEEEEcCCCcEEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCVG 31 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~h 31 (82)
-+|.-+..+|.++..||+|+.
T Consensus 84 dvGG~~~R~v~f~~~tG~v~v 104 (114)
T PF03975_consen 84 DVGGNFGRKVRFDPATGEVWV 104 (114)
T ss_dssp EE-SSS-EEEEEETTTTEEEE
T ss_pred eCCCCCCcEEEEEcCCCEEEE
Confidence 467788899999999999984
No 447
>PF03413 PepSY: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site. This is family M4 in the peptidase classification. ; InterPro: IPR005075 This signature, PepSY, is found in the propeptide of members of the MEROPS peptidase family M4 (clan MA(E)), which contains the thermostable thermolysins (3.4.24.27 from EC), and related thermolabile neutral proteases (bacillolysins) (3.4.24.28 from EC) from various species of Bacillus. It is also in many non-peptidase proteins, including Bacillus subtilis YpeB protein - a regulator of SleB spore cortex lytic enzyme - and a large number of eubacterial and archaeal cell wall-associated and secreted proteins which are mostly annotated as 'hypothetical protein'. Many extracellular bacterial proteases are produced as proenzymes. The propeptides usually have a dual function, i.e. they function as an intramolecular chaperone required for the folding of the polypeptide and as an inhibitor preventing premature activation of the enzyme. Analysis of the propeptide region of the M4 family of peptidases reveals two regions of conservation, the PepSY domain and a second domain, proximate to the N terminus, the FTP domain (IPR011096 from INTERPRO), which is also found in isolation in the propeptide of eukaryotic peptidases belong to MEROPS peptidase family M36. Propeptide domain swapping experiments, for example swapping the propeptide domain of PA protease with that of vibrolysin, both propeptides contain the FTP and PepSY domains, allows the PA protease domain to fold correctly and inhibits the C-terminal autoprocessing activity. However, swapping the propeptide of PA protease for the thermolysin propeptide, does not facilitate the correct folding nor the processing of the chimaeric protein into an active peptidase []. Mutational analysis of the Pseudomonas aeruginosa elastase gene revealed two mutations in the propeptide which resulted in the loss of inhibitory activity but not chaperone activity: A-15V and T-153I (where +1 is defined as the first residue of the mature peptidase). Both mutations resulted in peptidase activity, the T-153V mutation being much less effective than the A-15I mutation [] in activating peptidase activity. The T-153V mutation lies N-terminal to the FTP domain while the A-15I mutation is C-terminal to the PepSY domain. Given the diverse range of other proteins, both domains occur in in isolation, the exact function of each is still unclear; though it has been proposed that the PepSY domain primarily has inhibitory activity and in conjunction with the FTP domain in chaperone activity. ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis, 0005576 extracellular region; PDB: 2GU3_A 3NQZ_A 3NQY_A 2KGY_A.
Probab=26.97 E-value=93 Score=16.48 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=13.0
Q ss_pred eeeeeeeCC---CCCCcE--EEEcCCCcEEE
Q psy16910 6 LLLEYSIGD---RHLENT--LVCTKTGRCVG 31 (82)
Q Consensus 6 ~~yilgigD---Rh~~ni--li~~~tG~v~h 31 (82)
..|-+.+-+ -.+..+ .||..||+|+-
T Consensus 32 ~~Y~v~~~~~~~~~~~~~~v~VDa~tG~Il~ 62 (64)
T PF03413_consen 32 LVYEVEVVSDDDPDGGEYEVYVDAYTGEILS 62 (64)
T ss_dssp EEEEEEEEBTTSTTTEEEEEEEETTT--EEE
T ss_pred EEEEEEEEEEecCCCCEEEEEEECCCCeEEE
Confidence 345555442 333334 48889998874
No 448
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=26.53 E-value=71 Score=25.35 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=25.8
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeece
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~ 36 (82)
..|...|-|+|..+-+++ +|++|-.|-|+
T Consensus 222 ~eIyA~G~RNp~Gla~dp-~G~Lw~~e~Gp 250 (454)
T TIGR03606 222 SHIFTYGHRNPQGLAFTP-DGTLYASEQGP 250 (454)
T ss_pred ceEEEEeccccceeEECC-CCCEEEEecCC
Confidence 468889999999999996 99999998886
No 449
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=26.40 E-value=65 Score=21.78 Aligned_cols=25 Identities=20% Similarity=0.012 Sum_probs=20.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+||+++ .+|.+--.||+...
T Consensus 141 ~dlkp~Nili~-~~~~~~l~~~~~~~ 165 (275)
T cd05046 141 RDLAARNCLVS-SQREVKVSLLSLSK 165 (275)
T ss_pred CcCccceEEEe-CCCcEEEccccccc
Confidence 68889999997 67888777887653
No 450
>KOG0582|consensus
Probab=26.39 E-value=57 Score=26.47 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=33.2
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceee---ccccC---CCCCCCCCceeecHHH-HHhhCCC
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSF---GVATQ---LLPIPELMPFRLTPHI-LAVNEPY 66 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~---~~~~~---~~~~~E~vPFRLT~~~-~~~~g~~ 66 (82)
|=-++||||+ .+|.|---|||..- ..+.. .+...--+|..+.|+. .+-+.++
T Consensus 151 dvKAgnILi~-~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GY 209 (516)
T KOG0582|consen 151 DVKAGNILID-SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGY 209 (516)
T ss_pred ccccccEEEc-CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCc
Confidence 3457899998 99999999998762 22211 0122234677788887 4444443
No 451
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=26.35 E-value=44 Score=21.68 Aligned_cols=25 Identities=32% Similarity=0.302 Sum_probs=19.1
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|=.|+||+++.....+.-+|||.+
T Consensus 125 rd~kp~nil~~~~~~~~~l~dfg~~ 149 (384)
T COG0515 125 RDIKPENILLDRDGRVVKLIDFGLA 149 (384)
T ss_pred cCCCHHHeeecCCCCeEEEeccCcc
Confidence 3555999999844448999999964
No 452
>KOG2686|consensus
Probab=26.28 E-value=82 Score=24.53 Aligned_cols=29 Identities=31% Similarity=0.410 Sum_probs=25.2
Q ss_pred eeeeCCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 9 EYSIGDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 9 ilgigDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
++.=.|=...|||+...|++++-|||-++
T Consensus 213 vFcHNDlq~gNiL~~~~t~~Lv~IDfEYa 241 (366)
T KOG2686|consen 213 VFCHNDLQYGNILLLNSTKELVLIDFEYA 241 (366)
T ss_pred eeecccccccceeeecCCCceeEEeeccc
Confidence 45667888899999989999999999876
No 453
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=26.28 E-value=54 Score=23.21 Aligned_cols=24 Identities=8% Similarity=0.076 Sum_probs=19.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++ .+|++.-.||+..
T Consensus 125 ~dlkp~Nil~~-~~~~~~l~~~~~~ 148 (327)
T cd08227 125 RSVKASHILIS-VDGKVYLSGLRSN 148 (327)
T ss_pred CCCChhhEEEe-cCCcEEEcccchh
Confidence 67789999997 7888888888654
No 454
>PRK13497 chemoreceptor glutamine deamidase CheD; Provisional
Probab=26.14 E-value=68 Score=22.42 Aligned_cols=25 Identities=20% Similarity=0.182 Sum_probs=21.0
Q ss_pred eeCCCCCCcEEEEcCCCcEEEEeec
Q psy16910 11 SIGDRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~hiDfg 35 (82)
-+|..+..+|.++..||+++.--.+
T Consensus 132 DvGG~~gR~v~f~~~tG~v~~k~~~ 156 (184)
T PRK13497 132 STGGEHGRKLEYWPVSGRARQYPLT 156 (184)
T ss_pred eCCCCCCcEEEEECCCCeEEEEEcC
Confidence 3688899999999999999866554
No 455
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=26.04 E-value=40 Score=22.97 Aligned_cols=24 Identities=17% Similarity=0.007 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|-.|+||+++ .++.+.=+|||.+
T Consensus 141 ~di~p~nil~~-~~~~~kl~d~g~~ 164 (280)
T cd05043 141 KDIAARNCVID-EELQVKITDNALS 164 (280)
T ss_pred cccCHhhEEEc-CCCcEEECCCCCc
Confidence 78899999996 7798888999865
No 456
>PF10246 MRP-S35: Mitochondrial ribosomal protein MRP-S35; InterPro: IPR019375 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This is a family of short mitochondrial ribosomal proteins, less than 200 amino acids long. MRP-S35 was proposed as a more appropriate name to this group of proteins [].
Probab=25.75 E-value=91 Score=20.16 Aligned_cols=42 Identities=24% Similarity=0.349 Sum_probs=25.5
Q ss_pred eeeeCCCCCCcEEEEcCCCcEEE-------Eeeceeecccc-------CCCCCCCCCceee
Q psy16910 9 EYSIGDRHLENTLVCTKTGRCVG-------IDFGYSFGVAT-------QLLPIPELMPFRL 55 (82)
Q Consensus 9 ilgigDRh~~nili~~~tG~v~h-------iDfg~~~~~~~-------~~~~~~E~vPFRL 55 (82)
++.+|| --+++++ |+|+| ||||--|..-- +.+....+|-.||
T Consensus 16 fi~lG~-~~gk~V~----G~I~hvv~ddLYIDfG~KFhcVc~rp~~~~~~y~~G~rV~lrL 71 (104)
T PF10246_consen 16 FIQLGD-PEGKIVI----GKIFHVVDDDLYIDFGGKFHCVCKRPAVNGEKYVRGSRVRLRL 71 (104)
T ss_pred hhhcCC-ccCCEEE----EEEEEEecCceEEEeCCceeEEEecccccccccccCCEEEEEE
Confidence 456787 3555555 77776 68987665421 2244455677776
No 457
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=25.60 E-value=77 Score=19.79 Aligned_cols=21 Identities=24% Similarity=0.162 Sum_probs=18.9
Q ss_pred CCCCcEEEEcCCCcEEEEeece
Q psy16910 15 RHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 15 Rh~~nili~~~tG~v~hiDfg~ 36 (82)
+.|..++|| .+|+|.+...|.
T Consensus 114 ~~P~~~lId-~~G~V~~~~~g~ 134 (146)
T PF08534_consen 114 GIPTTFLID-KDGKVVYRHVGP 134 (146)
T ss_dssp SSSEEEEEE-TTSBEEEEEESS
T ss_pred eecEEEEEE-CCCEEEEEEeCC
Confidence 789999999 999999998874
No 458
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=25.49 E-value=68 Score=21.89 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=31.4
Q ss_pred cceeeeeeeeCCCCCCcEEEEcCCCcEEEEeeceeecccc
Q psy16910 3 NSSLLLEYSIGDRHLENTLVCTKTGRCVGIDFGYSFGVAT 42 (82)
Q Consensus 3 ~S~~~yilgigDRh~~nili~~~tG~v~hiDfg~~~~~~~ 42 (82)
++..++ +-+-|=+++|+-++ .+|++.-||...++-..+
T Consensus 77 ~~~~~~-~~lcDv~~~nfgv~-~~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 77 HGPLGF-FYLCDVSPDNFGVN-DDGRLKLIDLDDVFVEDK 114 (188)
T ss_pred cCCCCc-EEEeecchHHeEEe-CCCcEEEEechhcchhHH
Confidence 455566 78889999999997 889999999998876654
No 459
>PF11776 DUF3315: Domain of unknown function (DUF3315); InterPro: IPR024572 This is a bacterial family of uncharacterised proteins, which include YohN from Escherichia coli K12.; PDB: 2L1S_A.
Probab=25.11 E-value=83 Score=17.39 Aligned_cols=14 Identities=29% Similarity=0.351 Sum_probs=10.0
Q ss_pred cEEEEcCCCcEEEE
Q psy16910 19 NTLVCTKTGRCVGI 32 (82)
Q Consensus 19 nili~~~tG~v~hi 32 (82)
=+||+..||.|..|
T Consensus 39 yvLv~~~tG~I~~V 52 (52)
T PF11776_consen 39 YVLVAIATGIIASV 52 (52)
T ss_dssp EEEEETTT-BEEEE
T ss_pred EEEEEcCCCeEEeC
Confidence 36788899998765
No 460
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=24.82 E-value=41 Score=22.32 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=18.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
+|=.|+||+++.....+.=+||+.+
T Consensus 125 ~dl~~~nil~~~~~~~~~l~d~~~~ 149 (257)
T cd08225 125 RDIKSQNIFLSKNGMVAKLGDFGIA 149 (257)
T ss_pred ccCCHHHEEEcCCCCeEEecccccc
Confidence 6888999999744444567888754
No 461
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=24.79 E-value=77 Score=23.88 Aligned_cols=25 Identities=28% Similarity=0.375 Sum_probs=20.8
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
+|=.|+|||++ ..+.+.-+|||.+-
T Consensus 263 rdlkp~NiLl~-~~~~~kL~DfGla~ 287 (401)
T cd05107 263 RDLAARNVLIC-EGKLVKICDFGLAR 287 (401)
T ss_pred ccCCcceEEEe-CCCEEEEEecCcce
Confidence 56789999997 68888889999753
No 462
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=24.77 E-value=46 Score=23.17 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=21.5
Q ss_pred eCCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 12 IGDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 12 igDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
-+|=.|+||+++ ..|.+.=+|||.+-
T Consensus 138 H~dL~p~Nili~-~~~~~kL~dfg~~~ 163 (293)
T cd06647 138 HRDIKSDNILLG-MDGSVKLTDFGFCA 163 (293)
T ss_pred eccCCHHHEEEc-CCCCEEEccCccee
Confidence 377889999997 78889999998653
No 463
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=24.72 E-value=96 Score=14.82 Aligned_cols=24 Identities=29% Similarity=0.246 Sum_probs=20.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeece
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~ 36 (82)
+-.+|..|-+|...++++.+|...
T Consensus 7 ~~~~~~~la~d~~~~~lYw~D~~~ 30 (43)
T smart00135 7 GLGHPNGLAVDWIEGRLYWTDWGL 30 (43)
T ss_pred CCCCcCEEEEeecCCEEEEEeCCC
Confidence 566788899999999999999764
No 464
>KOG0578|consensus
Probab=24.40 E-value=66 Score=26.40 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.8
Q ss_pred CCCcEEEEcCCCcEEEEeecee
Q psy16910 16 HLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 16 h~~nili~~~tG~v~hiDfg~~ 37 (82)
--+|||+. .+|.|--+|||+|
T Consensus 396 KSDnILL~-~~g~vKltDFGFc 416 (550)
T KOG0578|consen 396 KSDNILLT-MDGSVKLTDFGFC 416 (550)
T ss_pred ccceeEec-cCCcEEEeeeeee
Confidence 35899995 9999999999998
No 465
>PF06588 Muskelin_N: Muskelin N-terminus; InterPro: IPR010565 This entry represents the N-terminal region of muskelin and is found in conjunction with several IPR006652 from INTERPRO repeats. Muskelin is an intracellular, kelch repeat protein that is needed in cell-spreading responses to the matrix adhesion molecule, thrombospondin-1 [].
Probab=24.22 E-value=41 Score=24.10 Aligned_cols=18 Identities=28% Similarity=0.187 Sum_probs=12.7
Q ss_pred eeeCCCCCCcEEEEcCCC
Q psy16910 10 YSIGDRHLENTLVCTKTG 27 (82)
Q Consensus 10 lgigDRh~~nili~~~tG 27 (82)
---++=||+|||+|+.+-
T Consensus 14 sys~~y~P~NIlvd~P~d 31 (199)
T PF06588_consen 14 SYSSNYHPENILVDKPND 31 (199)
T ss_pred ccCCccChhheeecCCCC
Confidence 334566899999986543
No 466
>PRK13488 chemoreceptor glutamine deamidase CheD; Provisional
Probab=24.15 E-value=79 Score=21.43 Aligned_cols=20 Identities=20% Similarity=0.267 Sum_probs=17.8
Q ss_pred eeCCCCCCcEEEEcCCCcEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCV 30 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~ 30 (82)
-+|..+..+|.++..||+++
T Consensus 127 dvGG~~gR~i~f~~~tG~v~ 146 (157)
T PRK13488 127 DVGGDYGRTVKFDLKTGKVI 146 (157)
T ss_pred EcCCCCCcEEEEECCCCEEE
Confidence 46788899999999999997
No 467
>PRK13498 chemoreceptor glutamine deamidase CheD; Provisional
Probab=24.14 E-value=79 Score=21.70 Aligned_cols=20 Identities=10% Similarity=0.124 Sum_probs=17.6
Q ss_pred eeCCCCCCcEEEEcCCCcEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCV 30 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~ 30 (82)
-+|..++.+|.++..||+++
T Consensus 135 DvGG~~gR~i~f~~~tG~v~ 154 (167)
T PRK13498 135 DLGSTGHRSIIFDLWNGNVW 154 (167)
T ss_pred eCCCCCCcEEEEECCCCEEE
Confidence 36788899999999999997
No 468
>PF14433 SUKH-3: SUKH-3 immunity protein
Probab=23.89 E-value=1.5e+02 Score=19.03 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=19.4
Q ss_pred eeeeCCCCCCcEEEEcCCCcEEEEeec
Q psy16910 9 EYSIGDRHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 9 ilgigDRh~~nili~~~tG~v~hiDfg 35 (82)
-+|--++....++|| .+|+|++.+-.
T Consensus 95 PiG~~~~~~~~l~id-e~Grvy~~~~~ 120 (142)
T PF14433_consen 95 PIGEEHDGHAILAID-ESGRVYGLDDT 120 (142)
T ss_pred EEEEecCCCEEEEEe-CCCCEEEecCC
Confidence 345555666777888 99999999864
No 469
>KOG0695|consensus
Probab=23.83 E-value=51 Score=26.31 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceeec
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSFG 39 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~~ 39 (82)
.|-.++|+|+| ..|++--+|||+|=+
T Consensus 375 rdlkldnvlld-aeghikltdygmcke 400 (593)
T KOG0695|consen 375 RDLKLDNVLLD-AEGHIKLTDYGMCKE 400 (593)
T ss_pred eeccccceEEc-cCCceeecccchhhc
Confidence 36678999998 999999999998744
No 470
>KOG0668|consensus
Probab=23.56 E-value=58 Score=24.69 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=21.5
Q ss_pred CCCCCcEEEEcCCCcEEEEeecee
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~ 37 (82)
|--|+|+|||...-++--||+|.+
T Consensus 157 DVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 157 DVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred cCCcceeeechhhceeeeeecchH
Confidence 557999999999999999999965
No 471
>COG3536 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.53 E-value=2e+02 Score=18.98 Aligned_cols=40 Identities=23% Similarity=0.386 Sum_probs=28.0
Q ss_pred CCCCCcEEEEcCCCcEEEEeeceeeccccCCCCCCCCCceeecHHHHHhhCCCC
Q psy16910 14 DRHLENTLVCTKTGRCVGIDFGYSFGVATQLLPIPELMPFRLTPHILAVNEPYG 67 (82)
Q Consensus 14 DRh~~nili~~~tG~v~hiDfg~~~~~~~~~~~~~E~vPFRLT~~~~~~~g~~g 67 (82)
++.|-.|.+++. -++..+.|. .+ -||||+.+++.+..|..
T Consensus 2 ~~~P~~lrvsk~-r~~L~l~f~----dg---------~~~~L~ae~LRv~sPsA 41 (120)
T COG3536 2 TQWPTELRVSKD-RKVLSLTFA----DG---------APFRLPAEFLRVLSPSA 41 (120)
T ss_pred CCCCceeEEecc-CcEEEEEeC----CC---------CcccCCHHHHHhcCchH
Confidence 356778888744 445555553 33 29999999999999863
No 472
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=23.48 E-value=46 Score=21.31 Aligned_cols=28 Identities=29% Similarity=0.162 Sum_probs=22.9
Q ss_pred CCCcEEEEcCCCcEEEEeeceeeccccC
Q psy16910 16 HLENTLVCTKTGRCVGIDFGYSFGVATQ 43 (82)
Q Consensus 16 h~~nili~~~tG~v~hiDfg~~~~~~~~ 43 (82)
+++..|-+.+-|..+|||.-+++.++.+
T Consensus 25 plsr~l~ey~~Gd~V~I~IdpSv~kGmP 52 (98)
T COG2139 25 PLSRYLQEYKVGDKVHIDIDPSVHKGMP 52 (98)
T ss_pred chhhHHhhccCCCEEEEEeCcccccCCC
Confidence 4566677778999999999999888764
No 473
>PLN00181 protein SPA1-RELATED; Provisional
Probab=23.18 E-value=70 Score=26.26 Aligned_cols=25 Identities=4% Similarity=-0.140 Sum_probs=19.3
Q ss_pred CCCCCCcEEEEcCCCcEEEEeeceee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~~ 38 (82)
.|=-|+||||+ ..|++--+||+.+-
T Consensus 104 rDlKP~NiLl~-~~~~~k~~d~~~~~ 128 (793)
T PLN00181 104 HNVRPSCFVMS-SFNHVSFIESASCS 128 (793)
T ss_pred ccCCchhEEEc-ccCcEEEeeccccC
Confidence 46789999996 77788877777553
No 474
>PRK13493 chemoreceptor glutamine deamidase CheD; Provisional
Probab=23.05 E-value=83 Score=22.53 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=18.7
Q ss_pred eeCCCCCCcEEEEcCCCcEEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCVG 31 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~h 31 (82)
-+|..++.+|.++..||+++-
T Consensus 159 DvGG~~gRki~f~~~tG~v~v 179 (213)
T PRK13493 159 DLGGAQPRKLLFDPQTGQAWV 179 (213)
T ss_pred eCCCCCCcEEEEECCCCEEEE
Confidence 478889999999999999983
No 475
>PF11094 UL11: Membrane-associated tegument protein; InterPro: IPR024351 The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment []. UL11 is acylated, which is crucial for lipid raft association [].
Probab=21.73 E-value=92 Score=16.70 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=13.8
Q ss_pred CCcEEEEcCCCcEEEEee
Q psy16910 17 LENTLVCTKTGRCVGIDF 34 (82)
Q Consensus 17 ~~nili~~~tG~v~hiDf 34 (82)
-.|+|+ ..+|+++..|=
T Consensus 14 R~N~Lv-T~~Ge~vsL~a 30 (39)
T PF11094_consen 14 RRNVLV-THSGETVSLDA 30 (39)
T ss_pred ecCEEE-ccCCeEEEeCh
Confidence 479999 59999997763
No 476
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=21.72 E-value=98 Score=14.53 Aligned_cols=20 Identities=20% Similarity=0.082 Sum_probs=15.6
Q ss_pred CCCCcEEEEcCCCcEEEEeec
Q psy16910 15 RHLENTLVCTKTGRCVGIDFG 35 (82)
Q Consensus 15 Rh~~nili~~~tG~v~hiDfg 35 (82)
+.|.-|-++ .+|+++=.|.+
T Consensus 2 ~~P~gvav~-~~g~i~VaD~~ 21 (28)
T PF01436_consen 2 NYPHGVAVD-SDGNIYVADSG 21 (28)
T ss_dssp SSEEEEEEE-TTSEEEEEECC
T ss_pred cCCcEEEEe-CCCCEEEEECC
Confidence 357778888 89999988864
No 477
>KOG3078|consensus
Probab=21.64 E-value=38 Score=24.72 Aligned_cols=15 Identities=20% Similarity=0.481 Sum_probs=12.1
Q ss_pred EEcCCCcEEEEeece
Q psy16910 22 VCTKTGRCVGIDFGY 36 (82)
Q Consensus 22 i~~~tG~v~hiDfg~ 36 (82)
++..||+++|+||-+
T Consensus 140 ihp~sG~~Yh~~~~p 154 (235)
T KOG3078|consen 140 IHPASGRVYHLEFNP 154 (235)
T ss_pred ccCcccceecccccC
Confidence 456899999999964
No 478
>PRK13490 chemoreceptor glutamine deamidase CheD; Provisional
Probab=21.45 E-value=96 Score=21.13 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=17.7
Q ss_pred eeCCCCCCcEEEEcCCCcEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCV 30 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~ 30 (82)
-+|..+..+|.++..||+|+
T Consensus 132 dvGG~~gR~i~f~~~tG~v~ 151 (162)
T PRK13490 132 DIGGNKGRTMIFDTSDGKVY 151 (162)
T ss_pred ECCCCCCcEEEEECCCCEEE
Confidence 36788899999999999997
No 479
>KOG1166|consensus
Probab=21.03 E-value=1.1e+02 Score=26.75 Aligned_cols=29 Identities=31% Similarity=0.398 Sum_probs=22.8
Q ss_pred CCCCCCcEEEE------cCCCcEEEEeeceeeccc
Q psy16910 13 GDRHLENTLVC------TKTGRCVGIDFGYSFGVA 41 (82)
Q Consensus 13 gDRh~~nili~------~~tG~v~hiDfg~~~~~~ 41 (82)
||=-|+|.||- ..+-.+.-||||.+++-.
T Consensus 818 gDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 818 GDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred ccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 89999999993 235568889999887765
No 480
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=20.92 E-value=83 Score=23.23 Aligned_cols=30 Identities=27% Similarity=0.148 Sum_probs=24.3
Q ss_pred eeeeeeCCCCCCcEEEEcCCCcEEEEeece
Q psy16910 7 LLEYSIGDRHLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 7 ~yilgigDRh~~nili~~~tG~v~hiDfg~ 36 (82)
..|+..|=|+|..+-++..||++|..|-|.
T Consensus 173 ~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~ 202 (331)
T PF07995_consen 173 SEIYAYGLRNPFGLAFDPNTGRLWAADNGP 202 (331)
T ss_dssp TTEEEE--SEEEEEEEETTTTEEEEEEE-S
T ss_pred EEEEEeCCCccccEEEECCCCcEEEEccCC
Confidence 467889999999999999999999999774
No 481
>cd03014 PRX_Atyp2cys Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx). Tpx is a bacterial periplasmic peroxidase which differs from other PRXs in that it shows substrate specificity toward alkyl hydroperoxides over hydrogen peroxide. As with all other PRXs, the peroxidatic cysteine (N-terminal) of Tpx is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Tpx is able to resolve this intermediate by forming an intramolecular disulfide bond with a conserved C-terminal cysteine (the resolving cysteine), which can then be reduced by thioredoxin. This differs from the typical 2-cys PRX which resolves the oxidized cysteine by forming an intermolecular disulfide bond with the resolving cysteine from the other subunit of the homodimer. Atypical 2-cys PRX homodimers have a loop-based
Probab=20.68 E-value=99 Score=19.25 Aligned_cols=22 Identities=5% Similarity=0.108 Sum_probs=18.4
Q ss_pred CCCcEEEEcCCCcEEEEeeceee
Q psy16910 16 HLENTLVCTKTGRCVGIDFGYSF 38 (82)
Q Consensus 16 h~~nili~~~tG~v~hiDfg~~~ 38 (82)
.|..++|| .+|+|.+++.++..
T Consensus 110 ~~~~~iid-~~G~I~~~~~~~~~ 131 (143)
T cd03014 110 ARAVFVID-ENGKVIYVELVPEI 131 (143)
T ss_pred ceEEEEEc-CCCeEEEEEECCCc
Confidence 47889998 89999999988643
No 482
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=20.66 E-value=90 Score=19.18 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=16.4
Q ss_pred CCCcEEEEcCCCcEEEEeece
Q psy16910 16 HLENTLVCTKTGRCVGIDFGY 36 (82)
Q Consensus 16 h~~nili~~~tG~v~hiDfg~ 36 (82)
-|..++|| ..|++.++-.|.
T Consensus 106 ~P~~~vid-~~G~v~~~~~G~ 125 (126)
T cd03012 106 WPALYLID-PTGNVRHVHFGE 125 (126)
T ss_pred CCeEEEEC-CCCcEEEEEecC
Confidence 48999998 679999887763
No 483
>PF02201 SWIB: SWIB/MDM2 domain; InterPro: IPR003121 The SWI/SNF family of complexes, which are conserved from yeast to humans, are ATP-dependent chromatin-remodelling proteins that facilitate transcription activation []. The mammalian complexes are made up of 9-12 proteins called BAFs (BRG1-associated factors). The BAF60 family have at least three members: BAF60a, which is ubiquitous, BAF60b and BAF60c, which are expressed in muscle and pancreatic tissues, respectively. BAF60b is present in alternative forms of the SWI/SNF complex, including complex B (SWIB), which lacks BAF60a. The SWIB domain is a conserved region found within the BAF60b proteins [], and can be found fused to the C terminus of DNA topoisomerase in Chlamydia. MDM2 is an oncoprotein that acts as a cellular inhibitor of the p53 tumour suppressor by binding to the transactivation domain of p53 and suppressing its ability to activate transcription []. p53 acts in response to DNA damage, inducing cell cycle arrest and apoptosis. Inactivation of p53 is a common occurrence in neoplastic transformations. The core of MDM2 folds into an open bundle of four helices, which is capped by two small 3-stranded beta-sheets. It consists of a duplication of two structural repeats. MDM2 has a deep hydrophobic cleft on which the p53 alpha-helix binds; p53 residues involved in transactivation are buried deep within the cleft of MDM2, thereby concealing the p53 transactivation domain. The SWIB and MDM2 domains are homologous and share a common fold.; GO: 0005515 protein binding; PDB: 1V31_A 3FE7_A 3JZQ_B 3EQY_B 2VYR_A 3JZO_A 3DAB_E 3LBJ_E 3FEA_A 3FDO_A ....
Probab=20.60 E-value=41 Score=19.75 Aligned_cols=16 Identities=19% Similarity=0.337 Sum_probs=13.4
Q ss_pred ceeecHHHHHhhCCCC
Q psy16910 52 PFRLTPHILAVNEPYG 67 (82)
Q Consensus 52 PFRLT~~~~~~~g~~g 67 (82)
||+++|++..++|...
T Consensus 4 ~~~ls~~L~~~lg~~~ 19 (76)
T PF02201_consen 4 RFKLSPELAEFLGEDE 19 (76)
T ss_dssp EEHHHHHHHHHTT-SC
T ss_pred CccCCHHHHHHhCCCC
Confidence 8999999999998754
No 484
>PRK13487 chemoreceptor glutamine deamidase CheD; Provisional
Probab=20.40 E-value=1e+02 Score=21.86 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=17.9
Q ss_pred eeCCCCCCcEEEEcCCCcEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCV 30 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~ 30 (82)
-+|..+..+|.++..||+|+
T Consensus 147 DvGG~~gR~v~f~~~tG~v~ 166 (201)
T PRK13487 147 DLLDIYPRKVYFFPTTGKVL 166 (201)
T ss_pred ECCCCCCcEEEEECCCCEEE
Confidence 46888899999999999998
No 485
>PRK13489 chemoreceptor glutamine deamidase CheD; Provisional
Probab=20.22 E-value=1e+02 Score=22.51 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=18.5
Q ss_pred eeCCCCCCcEEEEcCCCcEEE
Q psy16910 11 SIGDRHLENTLVCTKTGRCVG 31 (82)
Q Consensus 11 gigDRh~~nili~~~tG~v~h 31 (82)
-+|..++.+|.++..||+++-
T Consensus 145 DvGG~~gRkV~f~~~TG~v~V 165 (233)
T PRK13489 145 DLQGVHPRKVAFMPRTGRAMV 165 (233)
T ss_pred eCCCCCCcEEEEECCCCEEEE
Confidence 478889999999999999983
No 486
>KOG0614|consensus
Probab=20.17 E-value=59 Score=27.16 Aligned_cols=24 Identities=33% Similarity=0.472 Sum_probs=21.4
Q ss_pred CCCCCCcEEEEcCCCcEEEEeecee
Q psy16910 13 GDRHLENTLVCTKTGRCVGIDFGYS 37 (82)
Q Consensus 13 gDRh~~nili~~~tG~v~hiDfg~~ 37 (82)
.|-.|+|+|++ .+|-+--+|||++
T Consensus 544 RDLKPENllLd-~~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 544 RDLKPENLLLD-NRGYLKLVDFGFA 567 (732)
T ss_pred ccCChhheeec-cCCceEEeehhhH
Confidence 46789999998 9999999999975
Done!