BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16911
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07021|C1QBP_HUMAN Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Homo sapiens GN=C1QBP PE=1 SV=1
Length = 282
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 EKELFEFLSEEIQAEKKIQKSKSIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNHS 60
+K +FLS+EI+ E+KIQK K++P G++++L+G E L + V EKI + FN+N+S
Sbjct: 79 DKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKVAGEKITVTFNINNS 138
Query: 61 V----DADAEPQIDPNMDEPEIEMKSKPSFEVNFIK---GNKTLGFTCSFIPPESEPSED 113
+ D + EP ++E E E+ S P+F V IK G K L C + E ++
Sbjct: 139 IPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPEDEVGQEDE 198
Query: 114 GYNDLFSIDEV---DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDKLS 170
+D+FSI EV T E E K T + LD LYD LM++L ++G+ N F D+L
Sbjct: 199 AESDIFSIREVSFQSTGESE-WKDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELV 257
Query: 171 NLSTGYEHASYINLLSEIQKFT 192
LST EH YI L +++ F
Sbjct: 258 ELSTALEHQEYITFLEDLKSFV 279
>sp|Q9MZE0|C1QBP_CHLAE Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Chlorocebus aethiops GN=C1QBP PE=1 SV=2
Length = 282
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 9/201 (4%)
Query: 1 EKELFEFLSEEIQAEKKIQKSKSIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNHS 60
+K +FL++EI+ E+KIQK K++P G++++L+G E L + V EKI + FN+N+S
Sbjct: 79 DKAFVDFLNDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLMRKVAGEKITVTFNINNS 138
Query: 61 V----DADAEPQIDPNMDEPEIEMKSKPSFEVNFIK---GNKTLGFTCSFIPPESEPSED 113
+ D + EP ++E E E+ S P+F V IK G K L C + E ++
Sbjct: 139 IPPTFDGEEEPTQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPEDEVGQEDE 198
Query: 114 GYNDLFSIDEV--DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDKLSN 171
+D+FSI EV + K T + LD LYD LM++L ++G+ N F D+L
Sbjct: 199 AESDIFSIREVSFQSSGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELVE 258
Query: 172 LSTGYEHASYINLLSEIQKFT 192
LST EH YI+ L +++ F
Sbjct: 259 LSTALEHQEYISFLEDLKSFV 279
>sp|O35796|C1QBP_RAT Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Rattus norvegicus GN=C1qbp PE=1 SV=2
Length = 279
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 109/199 (54%), Gaps = 8/199 (4%)
Query: 1 EKELFEFLSEEIQAEKKIQKSKSIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNHS 60
+K EFL++EI+ EKKIQK KS+P ++++++G E L + V EKI + FN+N+S
Sbjct: 77 DKAFVEFLTDEIKEEKKIQKHKSLPKMSGDWELEVNGTEAKLLRKVAGEKITVTFNINNS 136
Query: 61 V----DADAEPQIDPNMDEPEIEMKSKPSFEVNFIK--GNKTLGFTCSFIPPESEPSEDG 114
+ D + EP +E E E+ S P+F V K G KTL C + E ++
Sbjct: 137 IPPTFDGEEEPSQGQKAEEQEPELTSTPNFVVEVTKTDGKKTLVLDCHYPEDEIGHEDEA 196
Query: 115 YNDLFSIDEV--DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDKLSNL 172
+D+FSI EV T + T + LD LYD LM++L ++G+ N F D+L L
Sbjct: 197 ESDIFSIKEVSFQTTGDSEWRDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELVEL 256
Query: 173 STGYEHASYINLLSEIQKF 191
ST EH YI L +++ F
Sbjct: 257 STALEHQEYITFLEDLKSF 275
>sp|O35658|C1QBP_MOUSE Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Mus musculus GN=C1qbp PE=1 SV=1
Length = 278
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 16/203 (7%)
Query: 1 EKELFEFLSEEIQAEKKIQKSKSIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNHS 60
+K EFL++EI+ EKKIQK KS+P ++++++G E L + V EKI + FN+N+S
Sbjct: 76 DKAFVEFLTDEIKEEKKIQKHKSLPKMSGDWELEVNGTEAKLLRKVAGEKITVTFNINNS 135
Query: 61 V----DADAEPQIDPNMDEPEIEMKSKPSFEVNFIK--GNKTLGFTCSFIPPESEPSEDG 114
+ D + EP +E E E S P+F V K G KTL C + E ++
Sbjct: 136 IPPTFDGEEEPSQGQKAEEQEPERTSTPNFVVEVTKTDGKKTLVLDCHYPEDEIGHEDEA 195
Query: 115 YNDLFSIDEV------DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+D+FSI EV D+ R+ T + LD LYD LM++L ++G+ N F D+
Sbjct: 196 ESDIFSIKEVSFQATGDSEWRDTNYTLNT----DSLDWALYDHLMDFLADRGVDNTFADE 251
Query: 169 LSNLSTGYEHASYINLLSEIQKF 191
L LST EH YI L +++ F
Sbjct: 252 LVELSTALEHQEYITFLEDLKSF 274
>sp|Q3T0B6|C1QBP_BOVIN Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Bos taurus GN=C1QBP PE=2 SV=1
Length = 278
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 111/202 (54%), Gaps = 12/202 (5%)
Query: 1 EKELFEFLSEEIQAEKKIQKSKSIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNHS 60
+K +FLS+EI+ EKKIQK KS+P G++++++G E L + V EKI + FN+N+S
Sbjct: 76 DKAFVDFLSDEIKEEKKIQKYKSLPKMSGGWELEVNGTEAKLVRKVAGEKITVTFNINNS 135
Query: 61 V-----DADAEPQIDPNMDEPEIEMKSKPSFEVNFIK--GNKTLGFTCSFIPPESE-PSE 112
+ + EP +E E E+ S P+F V K +K L C + PE E E
Sbjct: 136 IPPAFGGEEEEPSQGQKAEEQEPELTSTPNFVVEVTKDGSSKALVLDCHY--PEDEIGQE 193
Query: 113 DGYNDLFSIDEV--DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDKLS 170
D +D+FSI EV + K T + LD LYD LM++L ++G+ N F D+L
Sbjct: 194 DDQSDIFSIKEVSFQATGESDWKDTNYTLNTDSLDWGLYDHLMDFLADRGVDNTFADELV 253
Query: 171 NLSTGYEHASYINLLSEIQKFT 192
LST EH YI+ L +++ F
Sbjct: 254 ELSTALEHQEYISFLEDLKGFV 275
>sp|Q21018|CRI3_CAEEL Conserved regulator of innate immunity protein 3 OS=Caenorhabditis
elegans GN=cri-3 PE=1 SV=2
Length = 236
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 6/197 (3%)
Query: 3 ELFEFLSEEIQAEKKIQKSK---SIPSEIDGFQVKLDGPEVSLEKTVGSEKIEIHFNVNH 59
EL + L+ EI+AE+++ ++ GFQV EV L K GSE I + FNVNH
Sbjct: 41 ELQQALNREIEAEQQLSSDNLQGAVAPTFAGFQVTNKDAEVRLTKKNGSEDILVVFNVNH 100
Query: 60 SVDADAEPQIDPNMDEPEIEMKSKPSFEVNFIKGNKTLGFTCSFIPPESEPSE-DGYNDL 118
SVD D +P+ + + + P F V KG++ L F +P + +P E D +
Sbjct: 101 SVDMDEGFDDEPSQAVAPVPV-AMPPFTVEITKGDQRLCFHLELVPVDDQPDEYDFRVEE 159
Query: 119 FSIDEVDTYERENGKTTTIACLEEVLDGPLYDLL-MNYLEEKGISNEFVDKLSNLSTGYE 177
F + E+ + A + +D L+DLL + YLEE+G+ F L +T YE
Sbjct: 160 FYVAPSAKNGNEDVPSEVYASSGKYIDPDLHDLLFVRYLEERGLDARFCKTLVAYATHYE 219
Query: 178 HASYINLLSEIQKFTSQ 194
H+ Y+ LL +I+KF S+
Sbjct: 220 HSQYVGLLDKIKKFISK 236
>sp|Q83ET2|RL10_COXBU 50S ribosomal protein L10 OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=rplJ PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 125 DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+T R K TT ACLEEVL GP+ +L EE G + ++K
Sbjct: 57 NTLARRAFKETTYACLEEVLTGPI--VLFFSQEEPGAAARLIEK 98
>sp|A9NAL2|RL10_COXBR 50S ribosomal protein L10 OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=rplJ PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 125 DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+T R K TT ACLEEVL GP+ +L EE G + ++K
Sbjct: 57 NTLARRAFKETTYACLEEVLTGPI--VLFFSQEEPGAAARLIEK 98
>sp|A9KD41|RL10_COXBN 50S ribosomal protein L10 OS=Coxiella burnetii (strain Dugway
5J108-111) GN=rplJ PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 125 DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+T R K TT ACLEEVL GP+ +L EE G + ++K
Sbjct: 57 NTLARRAFKETTYACLEEVLTGPI--VLFFSQEEPGAAARLIEK 98
>sp|B6J273|RL10_COXB2 50S ribosomal protein L10 OS=Coxiella burnetii (strain CbuG_Q212)
GN=rplJ PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 125 DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+T R K TT ACLEEVL GP+ +L EE G + ++K
Sbjct: 57 NTLARRAFKETTYACLEEVLTGPI--VLFFSQEEPGAAARLIEK 98
>sp|B6J5C0|RL10_COXB1 50S ribosomal protein L10 OS=Coxiella burnetii (strain CbuK_Q154)
GN=rplJ PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 125 DTYERENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFVDK 168
+T R K TT ACLEEVL GP+ +L EE G + ++K
Sbjct: 57 NTLARRAFKETTYACLEEVLTGPI--VLFFSQEEPGAAARLIEK 98
>sp|B1LBI1|KCY_THESQ Cytidylate kinase OS=Thermotoga sp. (strain RQ2) GN=cmk PE=3 SV=1
Length = 220
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 30 GFQVKLDGPEVSLEKTVG---SEKIEI-HFNVNHSVDADA----EPQIDPNMDEPEIEMK 81
GFQ+ +DGP S + TV +EK+ H N + A A E + P+ E EIE
Sbjct: 2 GFQIAIDGPAASGKSTVARLLAEKLGFDHLNTGATYRAVAVYLHEKGLSPSSAEEEIENA 61
Query: 82 SKPSFEVNFIKGN 94
K + +++++ G
Sbjct: 62 LK-NLKIDYVNGR 73
>sp|Q9FUR2|IP5P2_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis
thaliana GN=IP5P2 PE=1 SV=2
Length = 646
Score = 30.4 bits (67), Expect = 7.9, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 66 EPQIDPNMDEPEIEMKSKPSFEVN------FIKGNKTLGF 99
EPQ +PNMD PE+ + S P + N TLGF
Sbjct: 251 EPQRNPNMDWPELALDSNPQIVGSEGKLRRVFSSNATLGF 290
>sp|P08394|EX5B_ECOLI Exodeoxyribonuclease V beta chain OS=Escherichia coli (strain K12)
GN=recB PE=1 SV=1
Length = 1180
Score = 30.4 bits (67), Expect = 8.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 129 RENGKTTTIACLEEVLDGPLYDLLMNYLEEKGISNEFV 166
R N IACL E D PLY+ L+ +++K + +++
Sbjct: 77 RSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWL 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.132 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,400,485
Number of Sequences: 539616
Number of extensions: 3451259
Number of successful extensions: 8412
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 8365
Number of HSP's gapped (non-prelim): 61
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)