Query psy16913
Match_columns 81
No_of_seqs 214 out of 1042
Neff 8.2
Searched_HMMs 13730
Date Fri Aug 16 16:53:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16913.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16913hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 1.9E-20 1.4E-24 105.5 8.2 67 1-81 27-93 (93)
2 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 2.9E-20 2.1E-24 104.0 8.8 62 1-76 28-89 (90)
3 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 3E-20 2.2E-24 103.6 6.5 61 1-75 27-87 (88)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 2.8E-20 2E-24 102.2 6.3 60 1-74 22-81 (82)
5 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 2.2E-20 1.6E-24 104.3 5.7 64 1-78 25-88 (89)
6 d2cpza1 d.58.7.1 (A:383-484) C 99.8 4.7E-20 3.4E-24 105.3 6.5 65 1-79 38-102 (102)
7 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 8.6E-20 6.2E-24 100.1 6.8 60 1-74 20-79 (80)
8 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 5.9E-20 4.3E-24 101.9 5.9 63 1-77 21-83 (85)
9 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 1.3E-19 9.5E-24 99.4 7.2 60 1-74 22-81 (82)
10 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 7.3E-20 5.3E-24 103.0 4.9 63 1-77 29-91 (93)
11 d1whwa_ d.58.7.1 (A:) Probable 99.8 2.9E-19 2.1E-23 101.3 6.8 64 1-78 28-91 (99)
12 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.5E-19 1.1E-23 99.5 5.3 64 1-78 18-82 (83)
13 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 2.9E-19 2.1E-23 106.5 6.3 64 1-78 62-125 (139)
14 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 7.4E-19 5.4E-23 95.9 6.2 59 1-74 20-78 (78)
15 d2cpia1 d.58.7.1 (A:101-189) E 99.8 3.7E-18 2.7E-22 95.3 8.9 59 1-70 31-89 (89)
16 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 1.1E-18 7.7E-23 96.4 6.4 62 1-76 18-82 (85)
17 d2cpha1 d.58.7.1 (A:454-547) P 99.8 7.2E-19 5.3E-23 99.0 5.8 63 1-77 28-92 (94)
18 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 2E-18 1.4E-22 98.6 6.9 61 1-76 30-90 (103)
19 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 4.3E-19 3.2E-23 98.9 4.0 65 1-79 25-89 (90)
20 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 1.1E-18 7.8E-23 96.5 5.6 58 1-72 26-85 (85)
21 d1fxla2 d.58.7.1 (A:119-203) H 99.7 9.7E-19 7.1E-23 96.8 5.3 58 1-72 26-85 (85)
22 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.7 3.4E-18 2.5E-22 95.4 7.3 62 1-78 28-89 (90)
23 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 1.4E-18 1E-22 96.8 5.4 62 1-78 28-89 (89)
24 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 3E-18 2.2E-22 95.9 6.6 62 1-78 28-89 (90)
25 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 5.2E-19 3.8E-23 101.0 3.3 61 1-76 38-98 (101)
26 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 7.8E-19 5.7E-23 100.2 3.9 62 1-76 28-89 (104)
27 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 3.7E-18 2.7E-22 97.7 6.7 63 1-78 40-102 (103)
28 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 1.3E-18 9.7E-23 95.2 4.4 60 1-74 21-80 (81)
29 d2cq3a1 d.58.7.1 (A:110-202) R 99.7 1.1E-17 8.1E-22 93.8 8.2 61 1-77 31-91 (93)
30 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 3.5E-18 2.5E-22 94.7 6.0 60 1-75 25-85 (86)
31 d2cqca1 d.58.7.1 (A:109-191) A 99.7 6.2E-18 4.5E-22 92.9 6.6 55 1-69 29-83 (83)
32 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 1.6E-18 1.2E-22 94.5 3.2 57 1-72 20-76 (77)
33 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 1.7E-17 1.2E-21 91.7 7.1 59 1-74 26-84 (84)
34 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 2.5E-17 1.8E-21 93.3 8.0 56 1-78 36-91 (98)
35 d2cpea1 d.58.7.1 (A:353-453) R 99.7 1.4E-17 1E-21 94.1 6.0 65 1-79 28-100 (101)
36 d1jmta_ d.58.7.3 (A:) d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.9e-20 Score=105.46 Aligned_cols=67 Identities=19% Similarity=0.340 Sum_probs=63.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAARP 80 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~~~ 80 (81)
+|++||+|.++.++.++.++.++| ||||+|.+.++|+.|++.|||..++|++|+|+||.+....+.
T Consensus 27 ~F~~~G~i~~v~i~~~~~~~~~kg--------------~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~~~~~grq 92 (93)
T d1h2vz_ 27 LFSKSGDIKKIIMGLDKMKKTACG--------------FCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQ 92 (93)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHHHTTTSEETTEECEEEEESCCCTTCC
T ss_pred HHHHHCCcceeccccccccccccc--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCCCC
Confidence 589999999999999999999999 999999999999999999999999999999999998888777
Q ss_pred C
Q psy16913 81 Y 81 (81)
Q Consensus 81 ~ 81 (81)
|
T Consensus 93 y 93 (93)
T d1h2vz_ 93 Y 93 (93)
T ss_dssp -
T ss_pred C
Confidence 6
No 2
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.9e-20 Score=103.99 Aligned_cols=62 Identities=34% Similarity=0.562 Sum_probs=59.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++|+.|+.+|.++| ||||+|.+.++|++|++.|||..++|+.|+|+||+|+.
T Consensus 28 ~f~~~G~v~~v~i~~d~~t~~~rg--------------~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~~ 89 (90)
T d2cq0a1 28 LFRPFGSISRIYLAKDKTTGQSKG--------------FAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPST 89 (90)
T ss_dssp TSTTTCCEEEEEEEECSSSCSEEE--------------EEEEEESSHHHHHHHHHHTTTCEETTEECEEEESSCCC
T ss_pred HHHHhccccccccccccccccccc--------------ceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeeeCCC
Confidence 699999999999999998999999 99999999999999999999999999999999999875
No 3
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.81 E-value=3e-20 Score=103.64 Aligned_cols=61 Identities=26% Similarity=0.376 Sum_probs=58.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.++++++|+.+|.++| ||||+|.+.++|++|++.|||..++|+.|+|+||.++
T Consensus 27 ~F~~~G~i~~v~i~~d~~tg~~~g--------------~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~~k 87 (88)
T d1rk8a_ 27 KFCDYGEIKNIHLNLDRRTGFSKG--------------YALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVK 87 (88)
T ss_dssp HHGGGSCEEEEEEEECTTTSSEEE--------------EEEEEESSHHHHHHHHHHHTTCEETTEECEEEESEEC
T ss_pred HHHHcCCccccccccccccccccc--------------ceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEecCC
Confidence 589999999999999999999999 9999999999999999999999999999999999876
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=2.8e-20 Score=102.20 Aligned_cols=60 Identities=32% Similarity=0.566 Sum_probs=57.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.++++++++.+|.++| ||||+|.++++|++|++.|||..+.|+.|+|++|+|
T Consensus 22 ~F~~~G~v~~~~i~~~~~~g~~~g--------------~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 22 LFRAIGPINTCRIMRDYKTGYSYG--------------YAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEECCEETTTTEECS--------------EEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCcceeeeeeecccCCccc--------------cceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 589999999999999999999999 999999999999999999999999999999999987
No 5
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.2e-20 Score=104.29 Aligned_cols=64 Identities=28% Similarity=0.541 Sum_probs=60.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.++.++.|+.+|.++| ||||+|.++++|+.|++.|||..++|+.|.|++|+|++.+
T Consensus 25 ~F~~~G~i~~v~i~~d~~~~~~kg--------------~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p~~~k 88 (89)
T d2cqba1 25 AFIPFGDITDIQIPLDYETEKHRG--------------FAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIK 88 (89)
T ss_dssp HHTTTSCCCCEECCCCSSSCCCSS--------------EEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCCCCCC
T ss_pred HHhhCCeEEecccccccccccccc--------------eeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCC
Confidence 489999999999999999999999 9999999999999999999999999999999999987654
No 6
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=4.7e-20 Score=105.32 Aligned_cols=65 Identities=75% Similarity=1.235 Sum_probs=61.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAAR 79 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~~ 79 (81)
+|++||+|.+++++.++.+|.++| ||||+|.++++|+.||+.|||..+.|+.|+|+||+++++++
T Consensus 38 ~F~~~G~i~~~~~~~~~~~g~~kG--------------~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k~~~k 102 (102)
T d2cpza1 38 MFMPFGNVVSAKVFIDKQTNLSKC--------------FGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSK 102 (102)
T ss_dssp HHGGGSCCSEEEEEECSSSCSEEE--------------EEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCCSCCCC
T ss_pred HHHhhccccccceeeecccCCCcc--------------ceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCCCCCCC
Confidence 589999999999999999999999 99999999999999999999999999999999999998764
No 7
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8.6e-20 Score=100.09 Aligned_cols=60 Identities=30% Similarity=0.428 Sum_probs=57.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.+++|++|+.+|.++| ||||+|.++++|..|++.|||..+.|++|+|+||+.
T Consensus 20 ~F~~~G~i~~v~i~~d~~tg~~~g--------------~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 20 KFSPAGPILSIRVCRDMITRRSLG--------------YAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred HHHHhCCEeEEEEEecccccCCCC--------------ceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 489999999999999999999999 999999999999999999999999999999999954
No 8
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.9e-20 Score=101.89 Aligned_cols=63 Identities=29% Similarity=0.420 Sum_probs=59.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.+++|++|+.||.++| ||||+|.++++|+.|++.|||..+.|++|.|++|.+...
T Consensus 21 ~F~~~G~v~~v~i~~d~~tg~~rg--------------~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~~ 83 (85)
T d2u2fa_ 21 LLTSFGPLKAFNLVKDSATGLSKG--------------YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAK 83 (85)
T ss_dssp HHTSSSCEEEEEEECCCSSSCCCC--------------EEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCCC
T ss_pred HHHhcCccceEEeeccccccccce--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCCC
Confidence 589999999999999999999999 999999999999999999999999999999999987654
No 9
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.3e-19 Score=99.37 Aligned_cols=60 Identities=37% Similarity=0.651 Sum_probs=57.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.++++++++.++.++| ||||+|.++++|+.|++.|||..++|+.|+|++|+|
T Consensus 22 ~f~~~G~v~~v~i~~~~~~~~~~g--------------~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 22 LFGSIGEIESCKLVRDKITGQSLG--------------YGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCcccccceeeccCCCcee--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 489999999999999998899999 999999999999999999999999999999999987
No 10
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=7.3e-20 Score=103.01 Aligned_cols=63 Identities=29% Similarity=0.443 Sum_probs=60.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.++++++++.+|.++| ||||+|.+.++|++|++.|||..+.|+.|+|++|.+++.
T Consensus 29 ~F~~~G~v~~v~~~~d~~tg~~kg--------------~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~~~~ 91 (93)
T d1x5ua1 29 LFLQAGPVVNTHMPKDRVTGQHQG--------------YGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNK 91 (93)
T ss_dssp HHHTTSCEEEEECCBCSSSCSBCS--------------CEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTTTSC
T ss_pred HHHHhCCccccceeeccccccccc--------------ceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCC
Confidence 589999999999999999999999 999999999999999999999999999999999998764
No 11
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=2.9e-19 Score=101.32 Aligned_cols=64 Identities=28% Similarity=0.352 Sum_probs=60.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++|+.|+.+++++| ||||+|.+.++|+.|++.|||..++|+.|+|++|.++.+.
T Consensus 28 ~F~~~g~v~~v~i~~d~~tg~~~g--------------~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~~~~ 91 (99)
T d1whwa_ 28 LFSAYGPLSELHYPIDSLTKKPKG--------------FAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEA 91 (99)
T ss_dssp HHHTTSCEEEEECCCCTTTCCCCS--------------EEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCCCSTT
T ss_pred HHHhcCCceeeeecccccccccCc--------------ceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCcc
Confidence 489999999999999999999999 9999999999999999999999999999999999887643
No 12
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.5e-19 Score=99.54 Aligned_cols=64 Identities=30% Similarity=0.496 Sum_probs=59.1
Q ss_pred CccCCceeeEE-EEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISS-KVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v-~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.++ ++++++.+|+++| ||||+|.++++|++|++.|||..++|++|+|++|.+++.+
T Consensus 18 ~F~~~G~i~~~~~i~~~~~~g~~~g--------------~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~~k 82 (83)
T d1x5ta1 18 TFSAFGVILQTPKIMRDPDTGNSKG--------------YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 82 (83)
T ss_dssp HHHTTSCBSSCCEECCCTTTCSCCS--------------EEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCCCC
T ss_pred HHHHhCceeeeEEEEeeccccccCc--------------eEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCCcC
Confidence 58999999765 7899999999999 9999999999999999999999999999999999988754
No 13
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.77 E-value=2.9e-19 Score=106.51 Aligned_cols=64 Identities=42% Similarity=0.642 Sum_probs=60.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++|+.++.|++++| ||||+|.+.++|..||+.|||..|+|+.|+|++|.++..+
T Consensus 62 ~F~~~G~i~~v~i~~d~~t~~~rg--------------~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~~~~~ 125 (139)
T d1u6fa1 62 LFERYGPIESVKIVCDRETRQSRG--------------YGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAASGHQR 125 (139)
T ss_dssp HHHHHSCEEEEEEEEETTTTEEEE--------------EEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSCCCCC
T ss_pred HHHhhccccccccccccccccccc--------------eeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCC
Confidence 589999999999999999999999 9999999999999999999999999999999999877654
No 14
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=7.4e-19 Score=95.91 Aligned_cols=59 Identities=27% Similarity=0.428 Sum_probs=55.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.+++|+.++ +++++| ||||+|.++++|++|++.|||..++|++|+|++|.+
T Consensus 20 ~F~~~G~v~~~~i~~~~-~g~~~g--------------~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 20 LFAEFGTLKKAAVHYDR-SGRSLG--------------TADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp HHHHHSCEEEEEESCSS-CCCSCC--------------EEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred HHHHhCCCeEEEEEEee-ccccce--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 48899999999999987 888999 999999999999999999999999999999999863
No 15
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=3.7e-18 Score=95.26 Aligned_cols=59 Identities=20% Similarity=0.263 Sum_probs=52.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEE
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQ 70 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~ 70 (81)
+|++||+|.++.|++++.++.+++ +.|||||+|.++++|.+|++.|||..++|++|+|+
T Consensus 31 ~F~~~G~I~~v~i~~~~~~~~~~~-----------~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 31 YFGKFGKIHKVVINNSTSYAGSQG-----------PSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp TTTTTSCEEEEEEECCSSCCSSSC-----------CCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred HhcccCCceEEEEeeccCcCCCCC-----------cceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 599999999999999987776553 34599999999999999999999999999999985
No 16
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.1e-18 Score=96.38 Aligned_cols=62 Identities=23% Similarity=0.471 Sum_probs=55.4
Q ss_pred CccCCceeeEEEEEecCCCC---CcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATN---QSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~---~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++|++++.++ .++| ||||+|.++++|++|++.|||..++|+.|.|++|.++.
T Consensus 18 ~F~~~G~v~~v~i~~~~~~~~~~~~kG--------------~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~~~ 82 (85)
T d2cpfa1 18 VFSKVGAIKSCTISKKKNKAGVLLSMG--------------FGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT 82 (85)
T ss_dssp HHHTTSCEEEEEEEEEECTTCCEEEEE--------------EEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSCSS
T ss_pred HHHHhCCccccceecccccccccccce--------------EEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 58999999999999987665 3456 99999999999999999999999999999999997654
No 17
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.2e-19 Score=99.01 Aligned_cols=63 Identities=22% Similarity=0.377 Sum_probs=57.7
Q ss_pred CccCCceeeEEEEEecCC-CCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhh-CCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRA-TNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAM-NGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~-~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~l-ng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.+++|++++. +|.++| ||||+|.++++|++|++.| ||..++|++|.|+||.++..
T Consensus 28 ~F~~~G~i~~v~i~~~~~~~g~~rg--------------~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~~~~ 92 (94)
T d2cpha1 28 LFSTFGELKTVRLPKKMTGTGAHRG--------------FGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVT 92 (94)
T ss_dssp HHHTTSCEEEEECCCCCSSSCSSCS--------------EEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCCCCC
T ss_pred HHHHhCCceEEEEEeccccCCCccc--------------EEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCCCCC
Confidence 589999999999998854 788999 9999999999999999998 99999999999999988754
No 18
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2e-18 Score=98.62 Aligned_cols=61 Identities=30% Similarity=0.433 Sum_probs=56.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++|+.++.+|+++| ||||+|.+.++|++||+.+|+ .++|+.|.|++|.++.
T Consensus 30 ~F~~~G~i~~v~i~~d~~tg~~kg--------------~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~~~ 90 (103)
T d2cqda1 30 YFEGFGDIEEAVVITDRQTGKSRG--------------YGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYLGA 90 (103)
T ss_dssp HHHTTSCEEEEEESCCSSSCCCCS--------------EEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTTTC
T ss_pred HHhhcccccceeccccccccccCC--------------eEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCCCC
Confidence 489999999999999999999999 999999999999999999886 7999999999986543
No 19
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.3e-19 Score=98.90 Aligned_cols=65 Identities=32% Similarity=0.553 Sum_probs=61.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAAR 79 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~~ 79 (81)
+|++||+|..+.++.++.++.++| ||||+|.++++|+.|++.|||..+.|+.|.|++|.++.+.+
T Consensus 25 ~F~~~G~i~~~~~~~~~~~~~~~g--------------~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~~~~r 89 (90)
T d1x5sa1 25 VFSKYGQISEVVVVKDRETQRSRG--------------FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNR 89 (90)
T ss_dssp HHHHHSCCCEEEECCCSSSCSCCS--------------EEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEECCCCCC
T ss_pred hhhccccccceeeccccccccccc--------------eEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCCCC
Confidence 488999999999999998999999 99999999999999999999999999999999998887654
No 20
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.74 E-value=1.1e-18 Score=96.50 Aligned_cols=58 Identities=24% Similarity=0.466 Sum_probs=55.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECC--EEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGM--KRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g--~~i~V~~a 72 (81)
+|++||+|.++++++++.+|.++| ||||+|.++++|.+|++.|||..+.| ++|.|+||
T Consensus 26 ~F~~~G~i~~~~~~~d~~~g~~~g--------------~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 26 IFGKYGSIVQKNILRDKLTGRPRG--------------VAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp HHTSSSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHhhCCEeeeeeecccccccCce--------------eEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 589999999999999999999999 99999999999999999999999987 88999987
No 21
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=9.7e-19 Score=96.81 Aligned_cols=58 Identities=29% Similarity=0.613 Sum_probs=54.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECC--EEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGM--KRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g--~~i~V~~a 72 (81)
+|++||+|.++++++|+.+|.++| ||||+|.++++|++|++.|||..+.| ++|.|+||
T Consensus 26 ~F~~~G~v~~v~i~~d~~~g~~kg--------------~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 26 LFSQYGRIITSRILVDQVTGVSRG--------------VGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHHhCCccccccccccccccCCC--------------eeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 589999999999999998999999 99999999999999999999999998 56999986
No 22
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.4e-18 Score=95.41 Aligned_cols=62 Identities=29% Similarity=0.403 Sum_probs=56.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++++.++.++ +| ||||+|.+.++|..|++.|||..+.|+.|+|+||.++..+
T Consensus 28 ~F~~~G~i~~v~i~~d~~~~--~~--------------~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~~~~~ 89 (90)
T d2cqia1 28 LFSQIGPCKSCKMITEHTSN--DP--------------YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ 89 (90)
T ss_dssp HHHHHSCEEEEEEECCCCSS--CC--------------EEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCCTTCC
T ss_pred HHHhcCCceeeeeecccCcc--ce--------------eeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCCC
Confidence 58899999999999987543 67 9999999999999999999999999999999999887654
No 23
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.4e-18 Score=96.81 Aligned_cols=62 Identities=35% Similarity=0.602 Sum_probs=56.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++|+.++ +.++| ||||+|.+.++|++|++.|||..++|+.|.|++|.++++|
T Consensus 28 ~F~~~G~v~~~~i~~~~--~~~kg--------------~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~~R 89 (89)
T d1cvja2 28 TFSAFGNILSCKVVCDE--NGSKG--------------YGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER 89 (89)
T ss_dssp HHHTTSCEEEEEECCBT--TBCCS--------------CEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTTTC
T ss_pred HHHhcCCceEEEEEeec--CCCcc--------------eeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCCC
Confidence 58999999999999986 34678 9999999999999999999999999999999999988764
No 24
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3e-18 Score=95.95 Aligned_cols=62 Identities=27% Similarity=0.388 Sum_probs=56.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++|++|+.+|.++| ||||+|.++++|++|++. +..++|+.|.|++|.++..+
T Consensus 28 ~F~~~G~i~~v~i~~d~~tg~srG--------------~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~~k~~~ 89 (90)
T d2cqga1 28 YFSTFGEVLMVQVKKDLKTGHSKG--------------FGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPNSKQSQ 89 (90)
T ss_dssp HHGGGSCEEEEEEEECSSSCSEEE--------------EEEEEESSHHHHHHHHHS--CEEETTEEEEEECCCTTCCC
T ss_pred HHHhhcccceeeeccCCCCcccCC--------------EEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCCCCCCC
Confidence 489999999999999999999999 999999999999999984 45899999999999987653
No 25
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=5.2e-19 Score=100.98 Aligned_cols=61 Identities=25% Similarity=0.347 Sum_probs=57.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|+.||+|.+++|++++.+|+++| ||||+|.++++|++|+. |||..+.|+.|.|+++.+++
T Consensus 38 ~F~~~G~V~~v~i~~d~~tg~~kG--------------~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~~~ 98 (101)
T d2cq4a1 38 FFSAVGKVRDVRIISDRNSRRSKG--------------IAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQAEK 98 (101)
T ss_dssp HHTTTSCEEEEEECCSCCSSSCCC--------------CEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHHHH
T ss_pred HHcCCCeEEEEEeeecCCCccccc--------------eEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCCCC
Confidence 589999999999999999999999 99999999999999995 99999999999999987643
No 26
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=7.8e-19 Score=100.20 Aligned_cols=62 Identities=26% Similarity=0.513 Sum_probs=58.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++|+.++.+|+++| ||||+|.+.++|+.|++.|||..+.|+.|+|++|.++.
T Consensus 28 ~f~~~G~i~~v~i~~~~~tg~~~g--------------~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~~ 89 (104)
T d1p1ta_ 28 IFSEVGPVVSFRLVYDRETGKPKG--------------YGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEK 89 (104)
T ss_dssp HHHTTSCCSEEEEEEETTTTEEEE--------------EEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCTT
T ss_pred hhhccccccccccccccceeccCC--------------ceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 589999999999999999999999 99999999999999999999999999999999998764
No 27
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.7e-18 Score=97.69 Aligned_cols=63 Identities=21% Similarity=0.386 Sum_probs=59.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.++.|++|+.++.++| ||||+|.+.++|++|++ ++|..|+|+.|.|++|.++.++
T Consensus 40 ~F~~~G~i~~~~i~~d~~~~~~kg--------------~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ke~~ 102 (103)
T d1x4ba1 40 YYEQWGKLTDCVVMRDPASKRSRG--------------FGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVAREES 102 (103)
T ss_dssp HHTSSCCCSEEEEECCTTTSSCCS--------------EEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSSCCCC
T ss_pred HHHhhCcccceeecccccCCCccC--------------eEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcccCCC
Confidence 489999999999999999999999 99999999999999996 7999999999999999998764
No 28
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=1.3e-18 Score=95.22 Aligned_cols=60 Identities=18% Similarity=0.293 Sum_probs=50.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|..+.++.++.+|.++| ||||+|.++++|++|++.|||..++|++|.|++|+|
T Consensus 21 ~f~~~G~v~~~~~~~~~~~~~~~g--------------~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 21 LLQDINVVALSIRLPSLRFNTSRR--------------FAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp HHHHTTCCCCEEECC-------CC--------------EEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCcEEeeeeecccccccccc--------------eeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 488999999999888888899999 999999999999999999999999999999999987
No 29
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.1e-17 Score=93.81 Aligned_cols=61 Identities=28% Similarity=0.538 Sum_probs=55.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.+|+++.++. .++| ||||+|.++++|.+|++.|||..++|+.|+|++|+++..
T Consensus 31 ~F~~~G~v~~v~~~~~~~--~~kg--------------~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~r~~ 91 (93)
T d2cq3a1 31 MFGQFGKILDVEIIFNER--GSKG--------------FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVM 91 (93)
T ss_dssp HGGGTSCEEEEEEECCTT--TTCC--------------EEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCSSCC
T ss_pred HHhhcceeeecccccccc--CCcc--------------eeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCcCCC
Confidence 589999999999998863 3678 999999999999999999999999999999999998754
No 30
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=3.5e-18 Score=94.72 Aligned_cols=60 Identities=28% Similarity=0.477 Sum_probs=52.4
Q ss_pred CccCCceeeEEEEEec-CCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFID-RATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~-~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.+++|+.+ +.+++++| ||||+|.+.++|++|++ |||..++|+.|+|++|.++
T Consensus 25 ~F~~~G~i~~v~i~~~~~~~~~~kg--------------~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~~k 85 (86)
T d2ghpa3 25 SFEGFGSIEKINIPAGQKEHSFNNC--------------CAFMVFENKDSAERALQ-MNRSLLGNREISVSLADKK 85 (86)
T ss_dssp HHGGGSCEEEEECCSCCC---CCCE--------------EEEEEESSHHHHHHHGG-GTTEEETTEEEEEEECCCC
T ss_pred HHHhhhhccceeeecccCCccccce--------------eeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEcCCC
Confidence 4899999999998764 46788888 99999999999999996 9999999999999999875
No 31
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=6.2e-18 Score=92.92 Aligned_cols=55 Identities=27% Similarity=0.571 Sum_probs=52.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEE
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKV 69 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V 69 (81)
+|++||+|.+++|+.++.+++++| ||||+|.+.++|+.|++.|||..++|++|+|
T Consensus 29 ~F~~~G~i~~v~i~~~~~~~~~~g--------------~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 29 VFSKYGPIADVSIVYDQQSRRSRG--------------FAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp HHHTTSCEEEEEEEECSSSSSEEE--------------EEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred HHHHhCCCcccccccccccccccc--------------ceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 489999999999999998999999 9999999999999999999999999999987
No 32
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.6e-18 Score=94.55 Aligned_cols=57 Identities=26% Similarity=0.446 Sum_probs=54.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|.+++|++|+.||+++| ||||+|.++++|++|++ +|+..++|+.|.|+.|
T Consensus 20 ~F~~~G~i~~v~i~~d~~tg~~kG--------------~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 20 YFGQFGEVKECLVMRDPLTKRSRG--------------FGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp HHTTTSCCCCEEEECCCCSSSCSS--------------EEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred HHHHhCCcceeeeecccCCCCccc--------------eEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 489999999999999999999999 99999999999999997 7999999999999987
No 33
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.7e-17 Score=91.65 Aligned_cols=59 Identities=19% Similarity=0.349 Sum_probs=55.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.+++|++|+.+|.++| ||||+|.++++|++|++ +++..|+|+.|+|+.|.+
T Consensus 26 ~F~~~G~i~~v~i~~d~~tg~~kG--------------~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~s 84 (84)
T d1l3ka1 26 HFEQWGTLTDCVVMRDPNTKRSRG--------------FGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVS 84 (84)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCC
T ss_pred HHHhhccccceeecccccCCCccc--------------EEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeeeC
Confidence 489999999999999999999999 99999999999999997 699999999999998853
No 34
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.5e-17 Score=93.33 Aligned_cols=56 Identities=25% Similarity=0.462 Sum_probs=51.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++| ++| ||||+|.+.++|++||+.|||..+.|+.|+|+++.++...
T Consensus 36 ~F~~~G~i~~~~i--------~rg--------------~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~~~ 91 (98)
T d1wf2a_ 36 IFSKYGKIVGCSV--------HKG--------------FAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVN 91 (98)
T ss_dssp SSTTSSCEEEEEE--------ETE--------------EEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCCCC
T ss_pred HHhhcCCEEEEEE--------eCC--------------eEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCCC
Confidence 6999999999988 367 9999999999999999999999999999999999775543
No 35
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.4e-17 Score=94.13 Aligned_cols=65 Identities=28% Similarity=0.448 Sum_probs=57.6
Q ss_pred CccCCceee--------EEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVI--------SSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~--------~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|. .+.+..++.+++++| ||||+|.++++|++|++.|||..++|++|+|++|
T Consensus 28 ~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g--------------~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a 93 (101)
T d2cpea1 28 FFKQCGVVKMNKRTGQPMIHIYLDKETGKPKG--------------DATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 93 (101)
T ss_dssp HHTTTSCBCBCSSSCCBSEECCBCTTTCSBCS--------------EEEEEBSSHHHHHHHHHHHTTCEETTEECEEECS
T ss_pred HHHHCceEEEeeecccceeEEeeccccccccc--------------eeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 488999874 566778888888888 9999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy16913 73 RPKDAAR 79 (81)
Q Consensus 73 ~~~~~~~ 79 (81)
+++.++.
T Consensus 94 ~~~~p~~ 100 (101)
T d2cpea1 94 RKKPPMN 100 (101)
T ss_dssp SCCCCST
T ss_pred CCCCCCC
Confidence 9876653
No 36
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=9.9e-18 Score=96.07 Aligned_cols=57 Identities=18% Similarity=0.175 Sum_probs=53.1
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|.+++|+++. +++++| ||||+|.+.++|.+|++.|||..++||+|.|++.
T Consensus 47 ~f~k~G~I~~v~I~~~~-~~~~~G--------------~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 47 MEEKYGEVEEMNVCDNL-GDHLVG--------------NVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHTCCEEEEEECCSS-SSSSEE--------------EEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred HhccCCCEEEEEeecCC-CCCEee--------------EEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 47899999999998775 888999 9999999999999999999999999999999985
No 37
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.2e-18 Score=98.87 Aligned_cols=64 Identities=20% Similarity=0.339 Sum_probs=60.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||.|..+.++.+..+|.++| ||||+|.++++|+.|++.|||..+.|+.|+|+||++++++
T Consensus 38 ~f~~~G~v~~~~~~~~~~~g~~~g--------------~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~k~~r 101 (102)
T d2cpxa1 38 LFARFQEKKGPPIQFRMMTGRMRG--------------QAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKKQR 101 (102)
T ss_dssp HTHHHHHSSSSCCEEEEECSSSCS--------------EEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCCCSCC
T ss_pred HHhhccceeeEEeecccccccccc--------------cceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCCcccC
Confidence 588999999999998888899999 9999999999999999999999999999999999998875
No 38
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=9e-18 Score=90.97 Aligned_cols=57 Identities=25% Similarity=0.446 Sum_probs=53.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|.++.|++++.+++++| ||||+|.++++|++|++ +++..|+|+.|.|+.|
T Consensus 19 ~F~~~G~i~~~~i~~d~~t~~~kg--------------~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 19 YFSKFGEVVDCTLKLDPITGRSRG--------------FGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp HHHTTSCEEEEECCCBTTTTBCCS--------------EEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred HHHhhccccccccccCCCCCCcCc--------------eEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 489999999999999999999999 99999999999999997 7999999999999754
No 39
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=3.7e-17 Score=91.83 Aligned_cols=64 Identities=27% Similarity=0.465 Sum_probs=58.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhC------CcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMN------GFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~ln------g~~i~g~~i~V~~a~~ 74 (81)
+|++||+|.++.++.++.++.++| ||||+|.+.++|.+|++.|| |..++|+.|+|++|.+
T Consensus 28 ~f~~~G~v~~~~~~~~~~~~~~~g--------------~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~ 93 (98)
T d1x4ha1 28 VLQQFGDLKYVRVVLHPDTEHSKG--------------CAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVT 93 (98)
T ss_dssp HHHTTSCEEEEECCBCSSSCCBCS--------------EEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCC
T ss_pred HHhccccceeeeeccccccccccc--------------eEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECCC
Confidence 488999999999999998999999 99999999999999999886 6789999999999998
Q ss_pred CCCC
Q psy16913 75 KDAA 78 (81)
Q Consensus 75 ~~~~ 78 (81)
+.+.
T Consensus 94 k~~a 97 (98)
T d1x4ha1 94 RDEA 97 (98)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 8754
No 40
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=6.2e-17 Score=91.34 Aligned_cols=57 Identities=32% Similarity=0.513 Sum_probs=52.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.+++++.+ +| ||||+|.+.++|+.|+..|||..+.|+.|+|.|++++..
T Consensus 38 ~F~~fG~i~~v~i~~~------kg--------------~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p~ 94 (96)
T d1x4ga1 38 TFSPFGQIMEIRVFPE------KG--------------YSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 94 (96)
T ss_dssp HHHHHSCEEEEEEETT------TT--------------EEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCCS
T ss_pred HHHHhCCceEEEEEec------ce--------------EEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 5889999999999976 57 999999999999999999999999999999999987643
No 41
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.4e-16 Score=86.56 Aligned_cols=57 Identities=19% Similarity=0.394 Sum_probs=53.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|..+.++.++.++.++| ||||+|.++++|++|++ +||..|+|++|.|+.|
T Consensus 22 ~F~~~G~i~~~~~~~~~~~~~~~g--------------~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 22 YFEQYGKIEVIEIMTDRGSGKKRG--------------FAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp HHTTTSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred HHHHhccccccccccCCCCccccc--------------EEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 489999999999999999999999 99999999999999986 8999999999999987
No 42
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.4e-17 Score=90.46 Aligned_cols=57 Identities=21% Similarity=0.452 Sum_probs=52.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|.+++|+.|+.+++++| ||||+|.++++|++||+ +++..++|+.|.|+.|
T Consensus 19 ~F~~~G~I~~v~i~~d~~t~~~rG--------------~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 19 YFGGFGEVESIELPMDNKTNKRRG--------------FCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp HHHHHSCEEEEECCCCTTTCCTTC--------------CEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred HHHHhCCccccccccccccccccc--------------EEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 489999999999999999999999 99999999999999997 5778999999999875
No 43
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=5.1e-17 Score=92.89 Aligned_cols=57 Identities=21% Similarity=0.448 Sum_probs=52.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++|++++ +| ||||+|.+.++|++|++.|||..+.|+.|+|++++.+.
T Consensus 23 ~F~~fG~I~~v~i~~~~-----kg--------------~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 23 LFGVYGDVQRVKILFNK-----KE--------------NALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp HHHHHTCEEEEEECCTT-----SC--------------CEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred HHhhccccceEEEEecc-----cc--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 58999999999999875 67 99999999999999999999999999999999997554
No 44
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=5.9e-17 Score=92.02 Aligned_cols=59 Identities=27% Similarity=0.454 Sum_probs=54.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|++||+|..+.++.+. ++.++| ||||+|.+.++|++|++.|||..|.|+++.|.++.|
T Consensus 38 ~F~~~G~i~~~~~~~~~-~~~~~g--------------~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 38 MLKPFGQVISTRILRDS-SGTSRG--------------VGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp TTTTTSCEEEEEEEECS-SSCEEE--------------EEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred HHhhcccccceeeeccc-cccccc--------------ceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 69999999999998885 788888 999999999999999999999999999999887765
No 45
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=4.7e-17 Score=87.52 Aligned_cols=57 Identities=25% Similarity=0.465 Sum_probs=53.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|..+.++.++.++.++| ||||+|.++++|++|++ +||..++|++|+|++|
T Consensus 19 ~F~~~G~i~~~~~~~~~~~~~~~~--------------~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 19 YFEQFGKVDDAMLMFDKTTNRHRG--------------FGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp HHHTTSCCSEECCBCCTTCTTSCC--------------EEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred HHHHhCCcceeeeeeeccccccCc--------------eeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 489999999999999998999999 99999999999999997 9999999999999986
No 46
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=2.6e-16 Score=90.65 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=52.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.+|++..+ +.++| ||||+|.+.++|..|++.|||..|+|+.|.|.++.+.
T Consensus 27 ~F~~~G~v~~i~~~~~---~~~kG--------------~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 27 IFGKYGPIRQIRVGNT---PETRG--------------TAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp HHHTTSCEEEEEEECS---TTTTT--------------EEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred HHhhcCCeEeeccccc---CCcCC--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 5899999999998754 46688 9999999999999999999999999999999998653
No 47
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.9e-17 Score=86.73 Aligned_cols=54 Identities=33% Similarity=0.708 Sum_probs=51.1
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEE
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLK 68 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~ 68 (81)
+|++||+|.++++++++.++.++| ||||+|.++++|++|++.|||..++|+.|+
T Consensus 18 ~F~~~G~v~~~~~~~~~~~~~~~g--------------~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 18 LCQPYGKIVSTKAILDKTTNKCKG--------------YGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp TSTTTSCEEEEEEECCSSSCSCCS--------------EEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred HHhhhccccccccccccccccccc--------------eeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 699999999999999999999999 999999999999999999999999998763
No 48
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=9.9e-17 Score=87.46 Aligned_cols=56 Identities=32% Similarity=0.540 Sum_probs=50.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.++.+..+ +| ||||+|.+.++|..|++.|||..++|++|+|+||+++.
T Consensus 23 ~F~~~G~I~~v~~~~~------~~--------------~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 23 AFSPFGNIIDLSMDPP------RN--------------CAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp HHSTTCCCSCEEEETT------TT--------------EEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred HHhccCccceeeeccC------CC--------------EEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 5899999999998754 56 99999999999999999999999999999999998753
No 49
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.2e-16 Score=89.20 Aligned_cols=60 Identities=25% Similarity=0.427 Sum_probs=53.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.++++.. +++++| ||||+|.+.++|.+|++.|||..++|+.|.|.||+++.+
T Consensus 27 ~f~~~G~i~~i~~~~---~~~~~g--------------~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak~~~~ 86 (91)
T d1nu4a_ 27 IFSRFGQILDILVSR---SLKMRG--------------QAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSD 86 (91)
T ss_dssp HHGGGSCEEEEECCH---HHHHTT--------------CEEEEESSHHHHHHHHHHHTTCEETTEECEEEECSSCCT
T ss_pred HhcccccccceEEee---eccCCC--------------ceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeCCCch
Confidence 389999999988654 466788 999999999999999999999999999999999988754
No 50
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=4.1e-16 Score=89.19 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=51.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.++++++ +++ ||||+|.+.++|.+|++.|||..++|+.|+|.||+++..
T Consensus 30 lF~~~G~i~~~~~~k------~~~--------------~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~~ 86 (104)
T d1weya_ 30 LFRTYDKDTTFQYFK------SFK--------------RVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHI 86 (104)
T ss_dssp HHHTTCSSCEEEEET------TTT--------------EEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSC
T ss_pred HhcccccceEEEEec------CCC--------------EEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCCC
Confidence 589999999999874 356 999999999999999999999999999999999977654
No 51
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=3.5e-16 Score=86.57 Aligned_cols=56 Identities=21% Similarity=0.382 Sum_probs=51.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+++++.+ +| ||||+|.+.++|++|++.|||..++|+.|+|+||.++.
T Consensus 28 ~F~~~G~i~~i~~~~~------k~--------------~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 28 LFEKYGKAGEVFIHKD------KG--------------FGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp HTSTTCCCSEEEEETT------TT--------------EEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred HHHHhCCceEeeeecc------cc--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 5899999999999865 46 99999999999999999999999999999999998764
No 52
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.1e-15 Score=85.74 Aligned_cols=60 Identities=23% Similarity=0.469 Sum_probs=52.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
+|++||+|..+.+..+ +.++| ||||+|.++++|+.||+.|||..+.|++|+|+||++...
T Consensus 34 ~F~~~G~v~~~~~~~~---~~~~g--------------~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~r~ 93 (95)
T d1x4aa1 34 VFYKYGAIRDIDLKNR---RGGPP--------------FAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRG 93 (95)
T ss_dssp HHGGGSCEEEEEECCS---SSSSC--------------CEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCCCC
T ss_pred HHhcCCceEEEEeccc---ccccc--------------eEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCCCC
Confidence 5899999999887543 35677 999999999999999999999999999999999987543
No 53
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.60 E-value=2.7e-17 Score=92.05 Aligned_cols=59 Identities=15% Similarity=0.269 Sum_probs=53.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.++.++.+ .+|+++| ||||+|.+.++|++|++ |||..+.|++|+|++|++|
T Consensus 33 ~F~~~G~i~~~~v~~~-~~g~~kg--------------~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~k 91 (91)
T d1fjeb1 33 AISELFAKNDLAVVDV-RTGTNRK--------------FGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGR 91 (91)
T ss_dssp HHHHHHHHHTCCCCEE-EEETTTT--------------EEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCCS
T ss_pred HHhcCCcEEEeeeeec-CCCCccE--------------EeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCCC
Confidence 4889999999988765 4889999 99999999999999996 9999999999999999875
No 54
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=3.6e-16 Score=87.85 Aligned_cols=64 Identities=16% Similarity=0.253 Sum_probs=54.8
Q ss_pred CccCCce-eeEEEEEecC-CCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCC--cEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGN-VISSKVFIDR-ATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNG--FQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~-i~~v~i~~~~-~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng--~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+ |.++.++.+. .+++++| ||||+|.++++|..|++.|++ ..+.|+.|.|+||.|+.
T Consensus 21 ~f~~~g~~i~~v~~~~~~~~~~~~rg--------------~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~~ 86 (96)
T d2disa1 21 EIAKVTEGVLDVIVYASAADKMKNRG--------------FAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEI 86 (96)
T ss_dssp HHHHHSTTEEEEECCSSSCTTTTTCC--------------EEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESCSSC
T ss_pred HHHHhCCcceEEEEeeeccccccCCC--------------eEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcCCCC
Confidence 4889996 8999999875 4578888 999999999999999999964 45679999999999876
Q ss_pred CC
Q psy16913 77 AA 78 (81)
Q Consensus 77 ~~ 78 (81)
+.
T Consensus 87 ~~ 88 (96)
T d2disa1 87 DV 88 (96)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 55
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.5e-15 Score=83.76 Aligned_cols=57 Identities=21% Similarity=0.172 Sum_probs=52.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKR 73 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~ 73 (81)
+|+.||+|.+++|+.++ ++.++| ||||+|.++++|++|++ ++|..+.|+.|.|.++.
T Consensus 26 ~F~~~G~v~~v~l~~~~-~~~~kG--------------~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 26 WLEDKGQVLNIQMRRTL-HKAFKG--------------SIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HHTTSCCEEEEEEEECT-TCCEEE--------------EEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred HHHHhcccccceeeeec-cCCcce--------------EEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 48999999999998876 888899 99999999999999996 79999999999999853
No 56
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.7e-15 Score=85.11 Aligned_cols=62 Identities=19% Similarity=0.393 Sum_probs=52.5
Q ss_pred CccCCceeeEEEEEecC-CCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDR-ATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~-~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++|| |.++.++.++ .++.++| ||||+|.++++|++|+ .||+..|+|+.|+|++|.++...
T Consensus 35 ~f~~~g-~~~~~~~~~~~~~g~~~g--------------~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~~~~~ 97 (104)
T d1wi8a_ 35 FFRGLN-ISAVRLPREPSNPERLKG--------------FGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVADQAQDK 97 (104)
T ss_dssp HTTTSC-EEEEECCBCSSCTTSBCS--------------CEEEEESSHHHHHHHH-GGGTCEETTEECEEEECCCCCCC
T ss_pred HHHHhc-cccceeeeeeccCCCcce--------------eeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECCCCCCC
Confidence 589999 6777777665 4678888 9999999999998776 59999999999999999887654
No 57
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.58 E-value=1.5e-15 Score=85.36 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=52.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAAR 79 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~~ 79 (81)
+|++||+|..+. .++.++| ||||+|.+.++|++|++.|||..++|++|+|+|+.++..++
T Consensus 36 ~F~~~g~v~~~~-----~~~~~~~--------------~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~~r 95 (96)
T d1fjca_ 36 VFEDALEIRLVS-----QDGKSKG--------------IAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGGTR 95 (96)
T ss_dssp HHCSEEEECCEE-----ETTEEEE--------------EEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCCCC
T ss_pred HHHhcccceeee-----ecCcccc--------------EEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCCC
Confidence 488999886653 2567778 99999999999999999999999999999999999987754
No 58
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.5e-15 Score=83.63 Aligned_cols=58 Identities=26% Similarity=0.367 Sum_probs=50.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||.|..+.+. .++| ||||+|.++++|..|+..|||..|.|+.|.|+||+|++..
T Consensus 28 ~F~~~g~i~~~~~~------~~rg--------------~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~~ 85 (86)
T d2cpda1 28 EFNNIKPGAVERVK------KIRD--------------YAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKD 85 (86)
T ss_dssp HHHTTSTTCEEEEE------ECSS--------------EEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCCC
T ss_pred hhcccceeeeEEEc------cccE--------------EEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCCC
Confidence 48899998877653 3467 9999999999999999999999999999999999987653
No 59
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4.5e-16 Score=85.04 Aligned_cols=58 Identities=19% Similarity=0.302 Sum_probs=50.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCc-EECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGF-QIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~-~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||.|.++.++.. +| ||||+|.++++|++|++.|||. .++|++|+|++|.|+..+
T Consensus 21 ~F~~~G~i~~~~~~~~------rg--------------~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 21 LFGDRKLPLAGQVLLK------SG--------------YAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp HHHHTTCCCSSCEEEE------TT--------------EEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred HHHHhCcEEEeEEecc------cc--------------eEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 4889999877666543 57 9999999999999999999996 699999999999998765
No 60
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=8.3e-16 Score=84.64 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=50.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|+.||.+....++.+..++.++| +|||+|.+.++|++|++.|||..+.||+|+|.++
T Consensus 29 ~F~~~~~~~~~~~~~~~~~g~~~G--------------~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 29 FFYGYQVIPGSVCLKYNEKGMPTG--------------EAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp HTTTSCCCTTTCEEEECSSSCEEE--------------EEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred HHhhcccceeEEEEEeCCCCCcce--------------EEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 488999987754444455889999 9999999999999999999999999999999985
No 61
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.5e-15 Score=85.35 Aligned_cols=59 Identities=20% Similarity=0.435 Sum_probs=52.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEE--CCEEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQI--GMKRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i--~g~~i~V~~a~~~~~ 77 (81)
+|++||+|.++.++.++ ++| ||||+|.++++|+.|++.|||..| .++.|+|.+++++..
T Consensus 27 ~F~~~G~i~~~~i~~~~----~~g--------------~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~~~ 87 (108)
T d2adba1 27 IFSKFGTVLKIITFTKN----NQF--------------QALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSL 87 (108)
T ss_dssp HHTTTSCEEEEEEEEET----TEE--------------EEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSCSC
T ss_pred HHccCCcEEEEEEEeeC----CCC--------------eEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCccc
Confidence 58999999999998775 367 999999999999999999999998 478999999977543
No 62
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=2.7e-15 Score=85.66 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=49.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.+|.|. .++| ||||+|.+.++|++|++.|||..+.|+.|.|+|+....
T Consensus 30 ~F~~fG~I~~v~l~------~~kg--------------~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 30 TFSRFGSLGRVLLP------EGGI--------------TAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp HHHTTSCEEEEECC------SSSS--------------CEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred hhhccCCccEEEee------ccCc--------------eEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 58999999999874 2467 99999999999999999999999999999999996543
No 63
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.5e-15 Score=92.67 Aligned_cols=63 Identities=19% Similarity=0.365 Sum_probs=58.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|+.||.|..+.++.++.++.++| ||||+|.++++|++|++ +++..+.|++|.|.+|.++.++
T Consensus 117 ~f~~~G~v~~~~i~~~~~~~~~~g--------------~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k~e~ 179 (183)
T d1u1qa_ 117 YFEQYGKIEVIEIMTDRGSGKKRG--------------FAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALSKQEM 179 (183)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCCHHHH
T ss_pred hhccCCceeeeeeecccccCccce--------------eEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCCcccc
Confidence 488999999999999998899999 99999999999999997 7999999999999999887654
No 64
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.4e-14 Score=82.00 Aligned_cols=58 Identities=22% Similarity=0.311 Sum_probs=52.4
Q ss_pred ccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 2 FLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 2 F~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
|++||+|..+.++.+ .++| |+||+|.++++|.+|+..|||..++||+|.|+++.++.+
T Consensus 40 ~~~~G~V~~v~~~~~----~~~G--------------~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~~ 97 (99)
T d2dita1 40 CSKFGQIRKLLLFDR----HPDG--------------VASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTD 97 (99)
T ss_dssp GGGTSCCSEEEEETT----CTTC--------------EEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSCCC
T ss_pred hcCcccEEEEeccCC----CCcc--------------EEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcCC
Confidence 789999999987755 3467 999999999999999999999999999999999988764
No 65
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.52 E-value=5e-15 Score=81.13 Aligned_cols=54 Identities=22% Similarity=0.468 Sum_probs=48.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEEC-CEEEEEEeeC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIG-MKRLKVQLKR 73 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~-g~~i~V~~a~ 73 (81)
+|++||+|.+++++.++ +| ||||+|.+.++|..|++.|||..+. |+.|+|+||+
T Consensus 28 ~f~~~G~i~~v~~~~~~-----~g--------------~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 28 LFNQFPGFKEVRLVPNR-----HD--------------IAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp HHTTSTTEEEEEECTTT-----CS--------------CEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred hhccCccEEEeeeeccc-----ce--------------eEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 48999999999987653 67 9999999999999999999999985 6899999986
No 66
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.52 E-value=2.3e-14 Score=77.28 Aligned_cols=55 Identities=20% Similarity=0.179 Sum_probs=48.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||+|.+++++.++. ..++ ||||+|.++++|++|+. +|+..|+|++|.|+.+
T Consensus 20 ~F~~~G~I~~v~~~~~~~--~~~~--------------~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 20 YFKHCGPIIHVDVADSLK--KNFR--------------FARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp HHGGGSCEEEEEEEECTT--SSSE--------------EEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred HHhcCCceEEEEEEeecc--ccce--------------EEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 489999999999999873 3346 99999999999999986 8999999999999865
No 67
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=3.2e-14 Score=79.01 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=49.8
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhh--CCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAM--NGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~l--ng~~i~g~~i~V~~a~~~~ 76 (81)
||++||+|.++.++.++ + +|||+|++.++|..|++.+ ++..+.|++|+|+||++..
T Consensus 29 lF~~fG~I~~i~i~~~k------~--------------~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~~ 86 (89)
T d1x4da1 29 LVEPFGVISNHLILNKI------N--------------EAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYK 86 (89)
T ss_dssp TTGGGSCEEEEEECSSS------S--------------CEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCCT
T ss_pred HHHhhCCeEEEEeeccc------e--------------EEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCcc
Confidence 79999999999988653 5 9999999999999999965 7889999999999997654
No 68
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=9.1e-16 Score=84.90 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=48.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.+++++.+ | ||||+|.+.++|++||..|||..+.|+.|.|.++.++
T Consensus 20 ~F~~~G~v~~~~i~~~-------g--------------~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 20 HMREAGDVCYADVYRD-------G--------------TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp HHGGGSCEEEEEECTT-------S--------------EEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred HHhhhccccccccccc-------c--------------eeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 5899999999998654 6 9999999999999999999999999999988877544
No 69
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=2.1e-14 Score=81.57 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=56.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|+.+|.|....++.++.++.++| ||||+|.++++|++|++ +|+..|.||.|.|.++.+++..
T Consensus 35 ~F~~~g~v~~~v~~~~~~~~~~kG--------------~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~~~~~ 97 (104)
T d1wg5a_ 35 FFSGLEIVPNGMTLPVDFQGRSTG--------------EAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSSRAEVR 97 (104)
T ss_dssp HTTTCCEEEEEEECCBCSSSCBCS--------------EEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEECTTTSC
T ss_pred HHHhcCCceEEEEEEeCCCCCcce--------------EEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECCHHHhc
Confidence 589999999877777777899999 99999999999999986 9999999999999999887644
No 70
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.3e-14 Score=82.19 Aligned_cols=61 Identities=13% Similarity=0.185 Sum_probs=52.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|+.|| +..+.++.+. ++.++| ||||+|.++++|++|++ ||+..|.||.|+|.++.++...
T Consensus 35 ~F~~~~-~~~v~~~~~~-~g~~~G--------------~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~~~~~ 95 (102)
T d1weza_ 35 FFSPLN-PMRVHIEIGP-DGRVTG--------------EADVEFATHEDAVAAMA-KDKANMQHRYVELFLNSTAGTS 95 (102)
T ss_dssp SSCSCC-CSEEEEEESS-SSCEEE--------------EEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEECCCCCC
T ss_pred HHhccC-cceeeeEEec-CCcceE--------------EEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcCCCCCC
Confidence 588898 4578888876 678888 99999999999999986 8999999999999999776543
No 71
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.2e-14 Score=80.25 Aligned_cols=57 Identities=14% Similarity=0.343 Sum_probs=49.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEE-CCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQI-GMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i-~g~~i~V~~a~~~ 75 (81)
+|++||.|.++.+..+ +++| ||||+|.+.++|.+|+..|||..+ +|+.|+|+|++++
T Consensus 30 ~F~~~G~v~~~~~~~~----~~~~--------------~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 30 LFSSNGGVVKGFKFFQ----KDRK--------------MALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp HHHTTSCCEEEEEECS----SSTT--------------CEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred HhhccCCEEEEEEeee----cccc--------------eeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 4889999988876543 3467 999999999999999999999998 5899999999864
No 72
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=3.8e-14 Score=76.40 Aligned_cols=55 Identities=22% Similarity=0.289 Sum_probs=46.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++|| +..+.+ ++++| ||||+|.+.++|++|++.|||..+.|++|+|+++.++.
T Consensus 18 ~F~~~g-~~~~~~------~~~~g--------------~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 18 LLSDYE-LKYCFV------DKYKG--------------TAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp HTTTSC-EEEEEE------ETTTT--------------EEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred HHhccc-ccceee------cccce--------------eEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 588999 444332 34577 99999999999999999999999999999999996653
No 73
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=6.8e-15 Score=81.45 Aligned_cols=57 Identities=19% Similarity=0.352 Sum_probs=49.5
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++++. .++| ||||+|.++++|++|+. ++..|+|++|.|++|.++...
T Consensus 25 ~F~~~G~v~~v~~~~-----~~~g--------------fafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~~ 81 (88)
T d1wf0a_ 25 FFSQYGDVMDVFIPK-----PFRA--------------FAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHNS 81 (88)
T ss_dssp HSTTTSCCCEEECCS-----SCCS--------------CCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCCC
T ss_pred HHHHcCCceEEEEee-----ccCc--------------eEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCCC
Confidence 589999999987543 4577 99999999999999986 889999999999999887654
No 74
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=7e-15 Score=83.05 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=50.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.+++|.. +| ||||+|.++++|++||+.|||..+.|+.|+|.+++++.++
T Consensus 35 ~F~~~G~v~~~~i~~-------~g--------------~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~~~ 91 (98)
T d1wg4a_ 35 HMREAGDVCYADVQK-------DG--------------MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPER 91 (98)
T ss_dssp HHTTSSCEEEEEEET-------TT--------------EEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEECCC
T ss_pred HHHhhcccccccccc-------cc--------------eEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCCCC
Confidence 589999999998763 46 9999999999999999999999999999999998765543
No 75
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.6e-14 Score=82.28 Aligned_cols=59 Identities=17% Similarity=0.156 Sum_probs=52.1
Q ss_pred ccCCceeeEEEEEecCCCCC--cccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 2 FLPFGNVISSKVFIDRATNQ--SKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 2 F~~~G~i~~v~i~~~~~~~~--~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
|++||+|.++.|++++.+.. ..| ++||+|.++++|.+|+..|||..++||.|.|.+..+
T Consensus 35 ~~k~G~v~~v~I~~~~~~~~~~~~g--------------~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 35 CSKYGLVKSIEIPRPVDGVEVPGCG--------------KIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDP 95 (104)
T ss_dssp HTTTSCEEEEECCCCTTSSSCTTCC--------------EEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEECH
T ss_pred hcccCceEEEEEeecCCCCccCCce--------------EEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcCH
Confidence 78999999999988765433 345 999999999999999999999999999999999864
No 76
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2e-14 Score=79.56 Aligned_cols=39 Identities=31% Similarity=0.354 Sum_probs=36.6
Q ss_pred EEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCCC
Q psy16913 39 FGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKDA 77 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~~ 77 (81)
||||+|.++++|++|++.|||..++|++|+|+++.++..
T Consensus 42 ~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~~ 80 (88)
T d1wg1a_ 42 TAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDAL 80 (88)
T ss_dssp EEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCCC
T ss_pred ceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 999999999999999999999999999999999976543
No 77
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.2e-14 Score=81.21 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=51.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|+.||.|..+.++.+..+|.++| ||||+|.++++|++|++ +||..|.|+.|.|.++.+
T Consensus 28 ~F~~~g~i~~~~~~~~~~~g~~~G--------------~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 28 FLEGIPVDENAVHVLVDNNGQGLG--------------QALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp HTTTSCCCSTTEEECCCTTSSCSS--------------CEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred hhcccceEEEEEEEEeCCCCCcCc--------------cEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 489999998765566666899999 99999999999999996 999999999999998754
No 78
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.5e-13 Score=74.84 Aligned_cols=56 Identities=20% Similarity=0.272 Sum_probs=49.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhh--CCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAM--NGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~l--ng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||.|.+++++.+ ++ ||||+|.+.++|+.|++.+ ++..+.|++|+|++++.+.
T Consensus 28 ~f~~~G~i~~v~~~~~------~~--------------~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~~ 85 (88)
T d2cq1a1 28 LGLPFGKVTNILMLKG------KN--------------QAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKE 85 (88)
T ss_dssp TTTTTSCEEEEEEETT------TT--------------EEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCSS
T ss_pred HHhccccccccccccc------ce--------------EEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCCC
Confidence 6999999999998754 46 9999999999999999865 6789999999999998765
No 79
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=5.1e-14 Score=79.50 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=50.0
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHH--hhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQ--AMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~--~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.++.++.+ +| ||||+|.+.++|.+|++ .+++..++|+.|+|++|+.+.
T Consensus 39 ~F~~fG~V~~v~~~~~------k~--------------~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~~~ 96 (99)
T d1x4fa1 39 LAEPYGKIKNYILMRM------KS--------------QAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYK 96 (99)
T ss_dssp TTTTTSCCSEEEEETT------TT--------------EEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECSCS
T ss_pred hhccccceeEEEEeec------CC--------------cEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCCcc
Confidence 6999999999998755 46 99999999999999997 578889999999999997654
No 80
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=4.9e-14 Score=79.15 Aligned_cols=57 Identities=23% Similarity=0.507 Sum_probs=50.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECC--EEEEEEeeCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGM--KRLKVQLKRPKDA 77 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g--~~i~V~~a~~~~~ 77 (81)
+|++||+|..+++.++ ++ ||||+|.+.++|..|++.|||..|.| ++|+|+||++.+.
T Consensus 37 ~f~~~G~i~~~~~~~~------~~--------------~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~~ 95 (97)
T d1whya_ 37 EFDRFGSIRTIDHVKG------DS--------------FAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGPS 95 (97)
T ss_dssp HHHTTSCEEEEEECSS------SC--------------CEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCCC
T ss_pred HHHhhcccceEeeecc------cc--------------EEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCCC
Confidence 5899999999998754 46 99999999999999999999999986 5899999987653
No 81
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=1.4e-13 Score=78.04 Aligned_cols=59 Identities=19% Similarity=0.167 Sum_probs=50.3
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhh--CCcEECCEEEEEEeeCCCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAM--NGFQIGMKRLKVQLKRPKDAA 78 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~l--ng~~i~g~~i~V~~a~~~~~~ 78 (81)
+|++||+|.++.+.++ ++ +|||+|.+.++|+.|++.| ++..+.|++|+|+|+..+...
T Consensus 35 ~F~~fG~I~~~~~~~~------k~--------------~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~~~~ 94 (104)
T d1wexa_ 35 ALEKFGTICYVMMMPF------KR--------------QALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSKRIT 94 (104)
T ss_dssp HHTTTSCEEEEEEETT------TT--------------EEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSSSCC
T ss_pred hhhhcccceEEEEEec------ce--------------eEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCCccC
Confidence 5899999999988754 56 9999999999999999987 566788999999999776544
Q ss_pred C
Q psy16913 79 R 79 (81)
Q Consensus 79 ~ 79 (81)
+
T Consensus 95 ~ 95 (104)
T d1wexa_ 95 R 95 (104)
T ss_dssp C
T ss_pred C
Confidence 3
No 82
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=6.1e-14 Score=80.63 Aligned_cols=60 Identities=22% Similarity=0.219 Sum_probs=52.7
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|+.||.+..+.++.+..+|.++| ||||+|.+.++|++|++ |||..|+||.|.|..+.++
T Consensus 38 ~F~~~g~~~~~~~~~~~~~g~~~G--------------~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~~~ 97 (112)
T d1wela1 38 FFKKLDIVEDSIYIAYGPNGKATG--------------EGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPITKK 97 (112)
T ss_dssp HSCSSCBCTTTCEEEECTTSSEEE--------------EEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEECHH
T ss_pred HHhhccccccceeeecCcccceee--------------EEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcChH
Confidence 488999998766666667889889 99999999999999996 9999999999999988654
No 83
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=3.2e-12 Score=69.81 Aligned_cols=53 Identities=17% Similarity=0.276 Sum_probs=45.0
Q ss_pred ccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEE-EEEEeeCCC
Q psy16913 2 FLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKR-LKVQLKRPK 75 (81)
Q Consensus 2 F~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~-i~V~~a~~~ 75 (81)
|++||+|.++++.. ++| ||||+|.++++|++|++ +||..+.|+. |.|..+..+
T Consensus 24 F~~~G~I~~~~~~~------~~~--------------~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~k 77 (81)
T d1wwha1 24 FAQYGNILKHVMSN------TGN--------------WMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCIDK 77 (81)
T ss_dssp HHTTSCEEEEEECS------SSS--------------EEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCCH
T ss_pred HHhhhhhheEEecC------CCC--------------EEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCCh
Confidence 88999999998643 357 99999999999999996 9999999974 568877654
No 84
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=8.3e-14 Score=77.06 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=45.0
Q ss_pred CccCCceeeEEEEE-----ecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 1 MFLPFGNVISSKVF-----IDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 1 lF~~~G~i~~v~i~-----~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
+|++||.|..+.+. .+..++.++| ||||+|.++++|+.|++ |||..+.|+.|+|+.+
T Consensus 21 ~F~~~g~~~~~~~~~~~~~~~~~~~~~kg--------------~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~r~ 82 (90)
T d1u2fa_ 21 FFNAQMRLGGLTQAPGNPVLAVQINQDKN--------------FAFLEFRSVDETTQAMA-FDGIIFQGQSLKIRRP 82 (90)
T ss_dssp HHHHHHTTTTSCCSSSCSEEECCEETTTT--------------EEEEEESSCTTTTTGGG-GSSCCSSSSCCCCBCT
T ss_pred HHHhhCcEEEEEEeccceeeecccCCCce--------------EEEEEeCCHHHHHHHHh-hCCcEECCEEEEECCC
Confidence 36777777655442 3445566777 99999999999999985 9999999999999754
No 85
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=1e-11 Score=70.08 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=37.9
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEE
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQI 62 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i 62 (81)
+|++||+|.++.++.+ ++ ||||+|.+.++|..|+..|||+.+
T Consensus 40 ~F~~~G~i~~i~~~~~------k~--------------~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 40 VLEKCGLVDALLMPPN------KP--------------YSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp HHHHHSCEEEEECCTT------CS--------------CEEEEESSHHHHHHHHHHTTTCEE
T ss_pred HHHhhCcccEEeeccC------cc--------------EEEEEECCHHHHHHHHHHhCCCCC
Confidence 5899999999987754 46 999999999999999999999987
No 86
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=8.7e-12 Score=71.56 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=47.2
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCH-HHHHHHHHhhCCcEECCEEEEEEeeCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNP-ASAHTAIQAMNGFQIGMKRLKVQLKRPK 75 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~-~~A~~Ai~~lng~~i~g~~i~V~~a~~~ 75 (81)
+|++||+|.+|.|+.+ +| ||||.|.++ ++|..|+..||+..+.++.+.|.++..+
T Consensus 31 ~F~~fG~V~~v~i~~~------kg--------------~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~ 86 (113)
T d1owxa_ 31 LFSNHGEIKWIDFVRG------AK--------------EGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLE 86 (113)
T ss_dssp HTCSSCCEEEEECCTT------CS--------------EEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECC
T ss_pred HHHhcCChheEEEecC------Cc--------------eEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeecc
Confidence 5999999999999854 57 999999996 6789999999999999888888777543
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=1.8e-10 Score=69.61 Aligned_cols=61 Identities=18% Similarity=0.367 Sum_probs=54.1
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCCCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRPKD 76 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~~~ 76 (81)
+|++||+|.++.+++++.++.++| ||||+|.++++|..|+. +++..+.++.+.+....++.
T Consensus 26 ~F~~~G~v~~~~~~~~~~~~~~~g--------------~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~~~ 86 (183)
T d1u1qa_ 26 HFEQWGTLTDCVVMRDPNTKRSRG--------------FGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVSRE 86 (183)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEE--------------EEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCCTT
T ss_pred HHHHcCCEEEEEeeecccCCCccC--------------ceecccCCHHHHHHHHH-hcCCcccccchhhhhhhhcc
Confidence 489999999999999999999999 99999999999999998 56788899988888775544
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.99 E-value=1e-05 Score=42.39 Aligned_cols=57 Identities=25% Similarity=0.324 Sum_probs=47.4
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
+|.++|+|.++.+.... .+.. .|-|...+..+|..|+..|+..+|.+++|.|.++..
T Consensus 16 ~f~~h~~V~sv~l~~~~-dg~~----------------~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 16 AFARHGKVKSVELSPHT-DYQL----------------KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHSCEEEEEECSCC-STTC----------------CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHhheeEEEEEEEecc-CCcE----------------EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 37788999998875443 2332 678999999999999999999999999999999753
No 89
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=1.7e-05 Score=43.44 Aligned_cols=50 Identities=14% Similarity=0.329 Sum_probs=42.9
Q ss_pred ccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEeeCC
Q psy16913 2 FLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLKRP 74 (81)
Q Consensus 2 F~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a~~ 74 (81)
|+.||+|.-++.+.| -..|+|.+-+.|-+|++ ++|.++.|+.|.|....|
T Consensus 45 l~~~GeViLvRFv~d----------------------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~~ 94 (95)
T d1ufwa_ 45 LGSYGTIVLVRINQG----------------------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGPSS 94 (95)
T ss_dssp HHHHSCCSEEEEETT----------------------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECCCC
T ss_pred HhhCCeEEEEEEeCC----------------------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecCCC
Confidence 677899888888866 46899999999999988 999999999999886543
No 90
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.48 E-value=0.79 Score=24.61 Aligned_cols=36 Identities=28% Similarity=0.484 Sum_probs=26.6
Q ss_pred CccCCceeeEEEEEecCCCCCcccccccccccccCcceEEEEEEcCHHHHHHHHHhhC
Q psy16913 1 MFLPFGNVISSKVFIDRATNQSKCFGECNRKVSVNQKCFGFVSFDNPASAHTAIQAMN 58 (81)
Q Consensus 1 lF~~~G~i~~v~i~~~~~~~~~kg~~~~~~~~~~~~~~~~fV~f~~~~~A~~Ai~~ln 58 (81)
||+.||.|.- ..+.|. -|||...+.++|+.++..++
T Consensus 35 lFSpfG~V~V-swIddT---------------------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 35 LFSAFGNIQI-SWIDDT---------------------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp HHTTTCSCCC-EEEETT---------------------EEEEECSCHHHHHHHHHHHH
T ss_pred HhcCCCceEE-EEecCc---------------------eEEEEecCHHHHHHHHHHhc
Confidence 5888988753 334443 69999999999998877544
No 91
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=63.70 E-value=0.69 Score=23.62 Aligned_cols=39 Identities=21% Similarity=0.298 Sum_probs=20.2
Q ss_pred ccCcceEEEEEEcCHHHHHHHHHhhCCcEECCEEEEEEee
Q psy16913 33 SVNQKCFGFVSFDNPASAHTAIQAMNGFQIGMKRLKVQLK 72 (81)
Q Consensus 33 ~~~~~~~~fV~f~~~~~A~~Ai~~lng~~i~g~~i~V~~a 72 (81)
..+++|||||.-++.+|.--.-..|++ -++|=.+.|.+.
T Consensus 24 ~~~~~G~GFv~~d~~~DifI~~~~~~~-A~~GD~V~v~i~ 62 (79)
T d2ix0a2 24 KATEKGFGFLEVDAQKSYFIPPPQMKK-VMHGDRIIAVIH 62 (79)
T ss_dssp ECCC--CEEEEEETTEEEEECHHHHTT-CCTTCEEEEEEE
T ss_pred EEeCCCcEEEEECCCCcEEECHHHHcC-CCCCCEEEEEEE
Confidence 345566999998775443222333443 234545566654
No 92
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.68 E-value=5.1 Score=23.11 Aligned_cols=27 Identities=11% Similarity=0.044 Sum_probs=23.1
Q ss_pred CcceEEEEEEcCHHHHHHHHHhhCCcE
Q psy16913 35 NQKCFGFVSFDNPASAHTAIQAMNGFQ 61 (81)
Q Consensus 35 ~~~~~~fV~f~~~~~A~~Ai~~lng~~ 61 (81)
.+.|.|||.+-++++++++++.+....
T Consensus 128 FNmGIGmvliV~~~~~~~v~~~l~~~g 154 (175)
T d1clia2 128 FNCGVGMIIALPAPEVDKALALLNANG 154 (175)
T ss_dssp CCTTEEEEEEECGGGHHHHHHHHHTTT
T ss_pred ecCcceEEEEECHHHHHHHHHHHHHcC
Confidence 677899999999999999998876543
No 93
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=42.79 E-value=12 Score=19.73 Aligned_cols=20 Identities=20% Similarity=0.368 Sum_probs=18.1
Q ss_pred EEEEEEcCHHHHHHHHHhhC
Q psy16913 39 FGFVSFDNPASAHTAIQAMN 58 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~~ln 58 (81)
..|..|.+.++|..|.+.+.
T Consensus 80 tvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 80 CVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp CEEEEESSHHHHHHHHHHSC
T ss_pred EEEEEeCCHHHHHHHHHHcC
Confidence 57999999999999999885
No 94
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=38.45 E-value=15 Score=19.05 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=19.2
Q ss_pred EEEEEEcCHHHHHHHHHhhCCc
Q psy16913 39 FGFVSFDNPASAHTAIQAMNGF 60 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~~lng~ 60 (81)
-.|..|.+.++|+.|.+.|...
T Consensus 88 t~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 88 AFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp CEEEECSSHHHHHHHHHHHTTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHh
Confidence 5789999999999999998754
No 95
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.86 E-value=28 Score=17.68 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=28.4
Q ss_pred EEEEEEcCHHHHHHHHHhhCCcEECC-----EEEEEEeeCC
Q psy16913 39 FGFVSFDNPASAHTAIQAMNGFQIGM-----KRLKVQLKRP 74 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~~lng~~i~g-----~~i~V~~a~~ 74 (81)
-|+|.|.+.++...-.+..+|+.+.+ .+-.|++|--
T Consensus 47 RAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~VE~AP~ 87 (91)
T d1uw4a_ 47 RAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPF 87 (91)
T ss_dssp EEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECEEEECSS
T ss_pred EEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeEEEEcCc
Confidence 68999999999999999999998742 2335666644
No 96
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=30.76 E-value=6.6 Score=18.80 Aligned_cols=34 Identities=12% Similarity=0.388 Sum_probs=16.7
Q ss_pred EEEEEEcCHHHHHHHHHhhCC---cEE-CCEEEEEEee
Q psy16913 39 FGFVSFDNPASAHTAIQAMNG---FQI-GMKRLKVQLK 72 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~~lng---~~i-~g~~i~V~~a 72 (81)
||||+-.+.+|.---+..+.. ..| .|..+.....
T Consensus 15 fGFI~~d~g~DiF~H~s~l~~~~~~~L~~G~~V~f~~~ 52 (66)
T d1c9oa_ 15 YGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIV 52 (66)
T ss_dssp EEEEEETTEEEEEEEGGGBCSSSCCCCCTTCEEEEEEE
T ss_pred EEEEEecCCceEEEEehhcccccCCcCCCCCEEEEEEE
Confidence 999987654432211122221 223 3666665554
No 97
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=30.54 E-value=13 Score=17.61 Aligned_cols=35 Identities=20% Similarity=0.468 Sum_probs=17.7
Q ss_pred EEEEEEcCHHHHH---HHHHhhCC-cEE-CCEEEEEEeeCC
Q psy16913 39 FGFVSFDNPASAH---TAIQAMNG-FQI-GMKRLKVQLKRP 74 (81)
Q Consensus 39 ~~fV~f~~~~~A~---~Ai~~lng-~~i-~g~~i~V~~a~~ 74 (81)
||||+-.+.+|.- .++. ..| ..+ .|..+..+....
T Consensus 14 fGFI~~~~g~diFvH~s~l~-~~g~~~l~~G~~V~f~~~~~ 53 (66)
T d1g6pa_ 14 YGFITKDEGGDVFVHWSAIE-MEGFKTLKEGQVVEFEIQEG 53 (66)
T ss_dssp EEEEEETTSCBCBBCSSSSC-CSSCCCCCSSSEEEEEEECS
T ss_pred eeEEEecCCceEEEEhHHhc-ccCCCcCCCCCEEEEEEEEC
Confidence 9999976654321 1222 112 122 366666665543
No 98
>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.18 E-value=33 Score=16.10 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=14.3
Q ss_pred EEEEEEcCHHHHHHHHH
Q psy16913 39 FGFVSFDNPASAHTAIQ 55 (81)
Q Consensus 39 ~~fV~f~~~~~A~~Ai~ 55 (81)
...-+|.++++|..|-.
T Consensus 28 ~~LGtf~t~eeAArAYD 44 (63)
T d1gcca_ 28 VWLGTFETAEDAALAYD 44 (63)
T ss_dssp EEEEEESSHHHHHHHHH
T ss_pred eccccccCHHHHHHHHH
Confidence 56889999999998754
No 99
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=24.87 E-value=32 Score=17.67 Aligned_cols=24 Identities=8% Similarity=-0.036 Sum_probs=20.8
Q ss_pred eEEEEEEcCHHHHHHHHHhhCCcE
Q psy16913 38 CFGFVSFDNPASAHTAIQAMNGFQ 61 (81)
Q Consensus 38 ~~~fV~f~~~~~A~~Ai~~lng~~ 61 (81)
||-||...-.+++...|....|..
T Consensus 52 GYvfV~~~~~~~~~~~Ir~t~gV~ 75 (101)
T d1m1ha2 52 GYILIKAHMNDKLLMAIEKTPHVF 75 (101)
T ss_dssp TEEEEEECCCHHHHHHHHTSTTEE
T ss_pred CEEEEEEEeCchHHHHHhcCCCEE
Confidence 399999999899999999888763
No 100
>d1sfea2 c.55.7.1 (A:12-92) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=22.66 E-value=32 Score=16.38 Aligned_cols=11 Identities=0% Similarity=-0.028 Sum_probs=8.2
Q ss_pred eEEEEEEcCHH
Q psy16913 38 CFGFVSFDNPA 48 (81)
Q Consensus 38 ~~~fV~f~~~~ 48 (81)
|.|+|.|.+..
T Consensus 23 Glc~i~F~d~~ 33 (81)
T d1sfea2 23 GICAILLGDDD 33 (81)
T ss_dssp SEEEEEEESCH
T ss_pred cEEEEEEecCh
Confidence 39999996633
No 101
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=22.29 E-value=23 Score=16.82 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.1
Q ss_pred EEEEEEcCH
Q psy16913 39 FGFVSFDNP 47 (81)
Q Consensus 39 ~~fV~f~~~ 47 (81)
||||+-++.
T Consensus 17 fGFI~~d~g 25 (69)
T d1mjca_ 17 FGFITPDDG 25 (69)
T ss_dssp EEEEEETTS
T ss_pred EEEEEEcCC
Confidence 999987653
Done!