Query psy16915
Match_columns 175
No_of_seqs 108 out of 225
Neff 7.0
Searched_HMMs 13730
Date Fri Aug 16 16:56:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16915.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16915hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qmwa2 d.58.18.3 (A:185-264) 45.2 2.5 0.00018 26.2 0.4 36 138-173 16-51 (80)
2 d1phza1 d.58.18.3 (A:19-115) P 44.8 3.3 0.00024 26.6 1.0 36 138-173 30-65 (97)
3 d1wu9a1 a.245.1.1 (A:191-249) 28.2 4.5 0.00033 23.9 -0.5 12 19-30 25-36 (59)
4 d2i5ua1 a.275.1.1 (A:2-75) Unc 27.6 14 0.001 22.4 1.9 15 21-35 9-23 (74)
5 d1x4pa1 a.217.1.1 (A:8-60) Arg 22.4 46 0.0033 18.4 3.2 25 13-37 4-28 (53)
6 d1sqwa2 d.17.6.3 (A:1-94) Nip7 21.0 31 0.0022 21.9 2.5 23 23-45 2-24 (94)
7 d1r8ja1 a.186.1.1 (A:177-282) 16.0 78 0.0057 20.2 3.7 33 21-55 2-34 (106)
8 d2ivya1 d.58.58.1 (A:2-89) Hyp 13.6 21 0.0015 22.2 0.3 24 18-41 32-56 (88)
9 d1xrda1 f.3.1.1 (A:1-52) Light 11.2 1.4E+02 0.0098 16.5 4.1 25 65-89 23-47 (52)
10 d2z15a1 d.370.1.1 (A:10-126) T 9.5 1.9E+02 0.014 18.5 4.2 31 14-44 9-39 (117)
No 1
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=45.22 E-value=2.5 Score=26.23 Aligned_cols=36 Identities=6% Similarity=0.180 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccceeeeeeeee
Q psy16915 138 LTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173 (175)
Q Consensus 138 ~~~~~~~~~ky~l~~~dl~~~~~We~K~~~~~y~el 173 (175)
+.+++..+.++.+|+-.+.+.+.=.++..|.||+|+
T Consensus 16 L~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~ 51 (80)
T d2qmwa2 16 LASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 51 (80)
T ss_dssp HHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEE
Confidence 457788888888888777555444556689999997
No 2
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=44.77 E-value=3.3 Score=26.65 Aligned_cols=36 Identities=8% Similarity=0.133 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccceeeeeeeee
Q psy16915 138 LTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173 (175)
Q Consensus 138 ~~~~~~~~~ky~l~~~dl~~~~~We~K~~~~~y~el 173 (175)
+.+++..+.++.+|+-.+.+.+.=.++..|.||+|+
T Consensus 30 L~~vL~~f~~~~INLt~IeSRP~~~~~~~Y~F~id~ 65 (97)
T d1phza1 30 LAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 65 (97)
T ss_dssp HHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred HHHHHHHHHHCCCCEEEEEeeccCCCCceEEEEEEc
Confidence 567888889999999887555444455579999986
No 3
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.24 E-value=4.5 Score=23.86 Aligned_cols=12 Identities=42% Similarity=0.969 Sum_probs=9.7
Q ss_pred HhccccCcHHHH
Q psy16915 19 KIFFGQLRAAEF 30 (175)
Q Consensus 19 ~lfFG~LR~~E~ 30 (175)
-..||+||.+|+
T Consensus 25 dFYF~KLRdIEi 36 (59)
T d1wu9a1 25 DFYFGKLRNIEL 36 (59)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 356899999995
No 4
>d2i5ua1 a.275.1.1 (A:2-75) Uncaracterized protein EF2839 {Enterococcus faecalis [TaxId: 1351]}
Probab=27.61 E-value=14 Score=22.36 Aligned_cols=15 Identities=13% Similarity=0.184 Sum_probs=13.8
Q ss_pred ccccCcHHHHHHHHH
Q psy16915 21 FFGQLRAAEFEHLME 35 (175)
Q Consensus 21 fFG~LR~~E~e~l~e 35 (175)
.||.|+|.|.|.+.+
T Consensus 9 gfG~lsp~~~e~i~~ 23 (74)
T d2i5ua1 9 GFGLMSSKTMTDFDY 23 (74)
T ss_dssp TSCSCCHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHH
Confidence 699999999999986
No 5
>d1x4pa1 a.217.1.1 (A:8-60) Arginine/serine-rich-splicing factor 14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.37 E-value=46 Score=18.44 Aligned_cols=25 Identities=32% Similarity=0.394 Sum_probs=21.4
Q ss_pred HHHHHHHhccccCcHHHHHHHHHhH
Q psy16915 13 AGKLVKKIFFGQLRAAEFEHLMERS 37 (175)
Q Consensus 13 ~~k~l~~lfFG~LR~~E~e~l~er~ 37 (175)
+-++++++.=|+|++-|+..+++.=
T Consensus 4 IeqlV~~ii~G~LspkeR~~~k~~P 28 (53)
T d1x4pa1 4 IDQLVKRVIEGSLSPKERTLLKEDP 28 (53)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHSG
T ss_pred HHHHHHHHHcCCCCHHHHHHhhcCC
Confidence 5688999999999999999888753
No 6
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.01 E-value=31 Score=21.89 Aligned_cols=23 Identities=17% Similarity=0.118 Sum_probs=20.0
Q ss_pred ccCcHHHHHHHHHhHHHHHHHHH
Q psy16915 23 GQLRAAEFEHLMERSWYAVTETC 45 (175)
Q Consensus 23 G~LR~~E~e~l~er~~~~v~~~~ 45 (175)
-+|++.|.+.+.||+..++-+-+
T Consensus 2 RpLteeEtk~vfeKLa~yiG~Ni 24 (94)
T d1sqwa2 2 RPLTEEETRVMFEKIAKYIGENL 24 (94)
T ss_dssp EECCHHHHHHHHHHHHHHHGGGT
T ss_pred CCCCHHHHHHHHHHHHHHHhhhH
Confidence 37899999999999999997754
No 7
>d1r8ja1 a.186.1.1 (A:177-282) Circadian clock protein KaiA, C-terminal domain {Synechococcus elongatus PCC 7942 [TaxId: 1140]}
Probab=16.00 E-value=78 Score=20.18 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=25.6
Q ss_pred ccccCcHHHHHHHHHhHHHHHHHHHHHHHhcCCcc
Q psy16915 21 FFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDF 55 (175)
Q Consensus 21 fFG~LR~~E~e~l~er~~~~v~~~~l~~~if~~~~ 55 (175)
|++.|.+.|.+.+.+++...=-+.++ .=|+++-
T Consensus 2 Flr~L~p~ErqeLL~~Lk~~YR~IlL--sYF~~d~ 34 (106)
T d1r8ja1 2 FLRNLPAYESQKLHQAMQTSYREIVL--SYFSPNS 34 (106)
T ss_dssp STTTSCHHHHHHHHHHHHHHHHHHHH--HHTSTTC
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH--HHcCCcH
Confidence 78999999999999999887666444 4455543
No 8
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=13.65 E-value=21 Score=22.15 Aligned_cols=24 Identities=13% Similarity=0.156 Sum_probs=18.6
Q ss_pred HHhcc-ccCcHHHHHHHHHhHHHHH
Q psy16915 18 KKIFF-GQLRAAEFEHLMERSWYAV 41 (175)
Q Consensus 18 ~~lfF-G~LR~~E~e~l~er~~~~v 41 (175)
|+-+| |+|++.|.+.+..++...+
T Consensus 32 Q~SVFeg~l~~~~~~~l~~~l~~~i 56 (88)
T d2ivya1 32 QYSVFMGDLNSSRLKDVEAGLKIIG 56 (88)
T ss_dssp ETTEEEEEECHHHHHHHHHHHHHHT
T ss_pred EeeEEEEEeCHHHHHHHHHHHHHHh
Confidence 44445 9999999999998876543
No 9
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=11.16 E-value=1.4e+02 Score=16.55 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhcCCCc
Q psy16915 65 LLLFLKAFHWLTEDRVDFMERSPMI 89 (175)
Q Consensus 65 ~l~~lK~fhwl~~dR~e~l~~sp~~ 89 (175)
++.++--|--++.||.+.++..|..
T Consensus 23 ~LAl~IHfiLLSt~rfNWleg~~~a 47 (52)
T d1xrda1 23 VLALLIHFILLSTERFNWLEGASTK 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSSS
T ss_pred HHHHHHHHHHhccCccccccCCCcC
Confidence 3444445777899999999876643
No 10
>d2z15a1 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.48 E-value=1.9e+02 Score=18.54 Aligned_cols=31 Identities=6% Similarity=0.058 Sum_probs=23.9
Q ss_pred HHHHHHhccccCcHHHHHHHHHhHHHHHHHH
Q psy16915 14 GKLVKKIFFGQLRAAEFEHLMERSWYAVTET 44 (175)
Q Consensus 14 ~k~l~~lfFG~LR~~E~e~l~er~~~~v~~~ 44 (175)
..++.++++|+|...-++...|++-..+.+.
T Consensus 9 v~Fl~~~l~~kl~~~~~~~F~~~L~~~L~~~ 39 (117)
T d2z15a1 9 LNFIISYLYNKLPRRRVNIFGEELERLLKKK 39 (117)
T ss_dssp HHHHHTTTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 3456677789988888888888888777765
Done!