RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16915
         (175 letters)



>d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG,
           OpgG), N-terminal domain {Escherichia coli [TaxId: 562]}
          Length = 374

 Score = 26.2 bits (58), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 101 LTVLGLLDLYFVVGAYQTTVTKGASVMI 128
           LT+  LLD     GAY+  V  G   ++
Sbjct: 181 LTIYALLDSPRATGAYKFVVMPGRDTVV 208


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.336    0.147    0.444 

Gapped
Lambda     K      H
   0.267   0.0502    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 660,426
Number of extensions: 28544
Number of successful extensions: 76
Number of sequences better than 10.0: 1
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 6
Length of query: 175
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 96
Effective length of database: 1,322,926
Effective search space: 127000896
Effective search space used: 127000896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 50 (23.6 bits)