RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy16925
         (166 letters)



>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
           complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
           g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
          Length = 155

 Score = 78.4 bits (194), Expect = 3e-19
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 23/123 (18%)

Query: 32  FSSRSAVTAH--TKAVHLGERPFVCHECG-----QSFASKGILQEHLTIHSDDAPWKCDI 84
           F S+  +  H  ++ +H   + FVCH  G     + F ++ +L  H+  H+ + P KC  
Sbjct: 13  FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF 72

Query: 85  --CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKR 140
             C K   +L N            LK H   HTG++PY C    CS+ F+N S+   H+ 
Sbjct: 73  EGCRKSYSRLEN------------LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 141 RMH 143
           R H
Sbjct: 121 RTH 123



 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 20/116 (17%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKC--DICSK 87
           F ++  +  H +  H GE+P  C    C +S++    L+ HL  H+ + P+ C  + CSK
Sbjct: 49  FKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK 107

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHN-LHTGKRPYTC--PWCSRTFANGSNCRSHKR 140
                S            D   H N  H+ ++PY C  P C++ + + S+ R H +
Sbjct: 108 AFSNAS------------DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151



 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 20/101 (19%)

Query: 49  ERPFVCHECGQSFASKGILQEHLT---IHSDDAPWKCDIC----SKKSLKLSNVSCGWYP 101
           E       C Q F S+  L  H+    IH +   + C         +  K          
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFK---------- 50

Query: 102 DESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
                L  H   HTG++P+ C +  C ++++   N ++H R
Sbjct: 51  -AQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR 90



 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 18/90 (20%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLT-IHSDDAPWKCDI--CS 86
           +S    +  H    H GE+P++C    C ++F++     +H    HS++ P+ C +  C+
Sbjct: 79  YSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCT 137

Query: 87  KKSLKLSNVSCGWYPDESKDLKNHHNLHTG 116
           K+    S+            L+ H     G
Sbjct: 138 KRYTDPSS------------LRKHVKTVHG 155



 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVC--HECGQSFASKGILQEHLTIHS 75
            FS+ S    H    H  E+P+VC    C + +     L++H+    
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154



 Score = 27.9 bits (63), Expect = 1.1
 Identities = 6/31 (19%), Positives = 9/31 (29%), Gaps = 2/31 (6%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKR--RMHPEE 146
                  CS+ F +      H     +H E 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGER 32


>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
           genomics, NPPSFA, national project on protein structural
           and functional analyses; NMR {Mus musculus} SCOP:
           g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
          Length = 124

 Score = 76.4 bits (189), Expect = 7e-19
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEH---LTIHSDDAPWKCDICSKK 88
           F S+  +  H +  H GE+PF C +CG+ +  K  L EH     ++  +  + C +C + 
Sbjct: 17  FLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET 75

Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
             +               L+ H   HTG+ PY C  CS+ F    + +SH  ++H
Sbjct: 76  FRRRME------------LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118



 Score = 66.0 bits (162), Expect = 8e-15
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 15/98 (15%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             G     C  C + F SK  L+ H   H+ + P++C  C K   +  N           
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKEN----------- 50

Query: 106 DLKNHH---NLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            L  H     ++  ++ +TC  C  TF      R H  
Sbjct: 51  -LLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV 87


>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
           initiator element, zinc finger protein, DNA- protein
           recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
          Length = 124

 Score = 74.9 bits (185), Expect = 3e-18
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 18/113 (15%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKS 89
           F   SA+  H    H G R  VC ECG++F     L+ H  +H+ + P++C    C K+ 
Sbjct: 17  FRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF 74

Query: 90  LKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
               N            L+ H  +HTG RPY CP+  C++ FA  +N +SH  
Sbjct: 75  SLDFN------------LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115



 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
            R   C    C + F     +++HL  H       C  C K  ++ S             
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGPR-VHVCAECGKAFVESSK------------ 49

Query: 107 LKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
           LK H  +HTG++P+ C +  C + F+   N R+H R
Sbjct: 50  LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR 85



 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 17/93 (18%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDI--CSK 87
           F   S +  H   VH GE+PF C    CG+ F+    L+ H+ IH+ D P+ C    C+K
Sbjct: 44  FVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPY 120
           K  + +N            LK+H   H   +  
Sbjct: 103 KFAQSTN------------LKSHILTHAKAKNN 123



 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWK 81
           RFS    +  H + +H G+RP+VC    C + FA    L+ H+  H+     +
Sbjct: 73  RFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124


>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
           1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
          Length = 190

 Score = 76.3 bits (189), Expect = 3e-18
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 13/109 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS R+ + AH +  H GE+P+ C ECG+SF+    L+ H   H+ + P+KC  C K   +
Sbjct: 87  FSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSR 145

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             N            L  H   HTG++PY CP C ++F+       H+R
Sbjct: 146 EDN------------LHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182



 Score = 76.3 bits (189), Expect = 4e-18
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 17/121 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK-SL 90
               S+  A   A+  GE+P+ C ECG+SF+    L EH   H+ + P+KC  C K  S 
Sbjct: 3   EFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS- 60

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
                       + KDL  H   HTG++PY CP C ++F+  +N R+H+ R H  E K Y
Sbjct: 61  ------------DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGE-KPY 106

Query: 151 E 151
            
Sbjct: 107 A 107



 Score = 75.9 bits (188), Expect = 5e-18
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 13/109 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS +  +T H +  H GE+P+ C ECG+SF+ +  L+ H   H+ + P+ C  C K   +
Sbjct: 59  FSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQ 117

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           L++            L+ H   HTG++PY CP C ++F+   N  +H+R
Sbjct: 118 LAH------------LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154



 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 13/88 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS  + + AH +  H GE+P+ C ECG+SF+ +  L  H   H+ + P+KC  C K   +
Sbjct: 115 FSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR 173

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRP 119
                          L  H   HTGK+ 
Sbjct: 174 RDA------------LNVHQRTHTGKKT 189



 Score = 50.1 bits (121), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 60  SFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRP 119
           S            +   + P+ C  C K   +  +            L  H   HTG++P
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDH------------LAEHQRTHTGEKP 49

Query: 120 YTCPWCSRTFANGSNCRSHKR 140
           Y CP C ++F++  +   H+R
Sbjct: 50  YKCPECGKSFSDKKDLTRHQR 70


>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
           DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
          Length = 119

 Score = 73.7 bits (182), Expect = 8e-18
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 17/114 (14%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           R+   S +  H++  H GE+P+ C   +C + F+    L+ H   H+   P++C  C +K
Sbjct: 17  RYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK 75

Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
             +  +            LK H   HTG++P++C W  C + FA       H  
Sbjct: 76  FSRSDH------------LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117



 Score = 66.4 bits (163), Expect = 5e-15
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)

Query: 48  GERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
            +RPF+C    C + +     LQ H   H+ + P++CD             C      S 
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF----------KDCERRFSRSD 52

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            LK H   HTG +P+ C  C R F+   + ++H R
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR 87



 Score = 31.0 bits (71), Expect = 0.064
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 115 TGKRPYTC--PWCSRTFANGSNCRSHKR 140
           + KRP+ C  P C++ +   S+ + H R
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSR 29


>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
           structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
           k.12.1.1
          Length = 106

 Score = 72.5 bits (179), Expect = 2e-17
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 36  SAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV 95
           S  +   +     ++ F+C  CG+ F     L  H   H+D+ P+ CDIC K   +  + 
Sbjct: 3   SGSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH- 60

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                      L++H  +H+ ++P+ C  C + F        HK  +H +      
Sbjct: 61  -----------LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK-TLHMQT-SSPT 103



 Score = 63.6 bits (156), Expect = 4e-14
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+    +  H +  H  ERP+ C  C ++F  +  L++H  IHS + P+KC  C K   +
Sbjct: 27  FTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ 85

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
                          L  H  LH      T 
Sbjct: 86  SRT------------LAVHKTLHMQTSSPTA 104



 Score = 39.3 bits (93), Expect = 6e-05
 Identities = 9/37 (24%), Positives = 13/37 (35%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           S            K+ + C +C R F    N   H+R
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER 38


>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
           DNA- binding, transcription, C2H2-type zinc finger,
           structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1 g.37.1.1
          Length = 96

 Score = 72.1 bits (178), Expect = 2e-17
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 12/95 (12%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
                P  C  CG+ F+ K  L+ H+  H+   P+KC  C   +   S+           
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSS----------- 51

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            L  H  +H+ +RP+ C  C     N S    H R
Sbjct: 52  -LNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR 85



 Score = 69.0 bits (170), Expect = 3e-16
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS +  +  H    H G +P+ C  C  + A    L +HL IHSD+ P+KC IC   S  
Sbjct: 18  FSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN 76

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
            S             L  H   HTG    + 
Sbjct: 77  SSQ------------LTVHLRSHTGDSGPSS 95


>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
           g.37.1.1 g.37.1.1
          Length = 95

 Score = 70.6 bits (174), Expect = 6e-17
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 14/100 (14%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             G     C  CG+ F     L  H   HS + P+ C +C  +  +              
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDR----------- 50

Query: 106 DLKNHHNLHTG--KRPYTCPWCSRTFANGSNCRSHKRRMH 143
            +  H   H G   +PY C  C + F+   +   H +++H
Sbjct: 51  -MSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89


>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
           domain containing protein 22B, structural genomics,
           NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
          Length = 110

 Score = 69.8 bits (172), Expect = 2e-16
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 15/106 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+ +S    H   +HLG RP+ C  CG+ F  K  L  H+ IH+   P++C+IC+K+ + 
Sbjct: 19  FTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW 77

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 137
             +               H ++ +  + Y      +     S   S
Sbjct: 78  RDSF--------------HRHVTSCTKSYEAAKAEQNTTEASGPSS 109



 Score = 60.5 bits (148), Expect = 6e-13
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDES 104
              G++ + C +CG+SF  K     H+++H    P+ C +C KK     +          
Sbjct: 4   GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH---------- 52

Query: 105 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             L  H  +HTG +PY C  C++ F    +   H R +     K YE
Sbjct: 53  --LVGHMKIHTGIKPYECNICAKRFMWRDSF--H-RHVTSCT-KSYE 93



 Score = 30.5 bits (70), Expect = 0.10
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
            +  +G + Y C  C ++F + S    H   MH    + Y 
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHM-SMHLGL-RPYG 39


>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
           protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
           musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
           1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
           1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
          Length = 90

 Score = 68.6 bits (169), Expect = 3e-16
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)

Query: 49  ERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+  G L  H+ IH+   P++C IC +   +  +            
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDH------------ 49

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           L  H   HTG++P+ C  C R FA     + H +
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83



 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
           RFS   ++T H + +H G++PF C  C ++F+    L  H+  H+ + P+ CDIC +K  
Sbjct: 15  RFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTG 116
           +                K H  +H  
Sbjct: 74  RSDE------------RKRHTKIHLR 87


>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens}
          Length = 115

 Score = 67.5 bits (164), Expect = 2e-15
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 12/123 (9%)

Query: 33  SSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL--TIHSDDAPWKCDICSKKSL 90
           SS S+   +  ++  G   F C +C  ++ +   L  H+  T H  D   + D  +    
Sbjct: 2   SSGSSGKLY-GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNN---- 56

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
                   W     + L         ++   C +C  +F +  +   H  +    +    
Sbjct: 57  -----PKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

Query: 151 ESS 153
            SS
Sbjct: 112 PSS 114


>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
           cerebellum 3, disease mutation, DNA-binding,
           metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
          Length = 155

 Score = 67.7 bits (166), Expect = 3e-15
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 23/121 (19%)

Query: 32  FSSRSAVTAHT--KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS 89
            SS   +      K +   +       C ++F++   L  H+T+     P + +      
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV---- 59

Query: 90  LKLSNVSCGWY--PDESK------DLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHK 139
                  C W   P E K       L NH  +HTG++P+ CP+  C + FA   N + HK
Sbjct: 60  -------CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112

Query: 140 R 140
           R
Sbjct: 113 R 113



 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 26/122 (21%)

Query: 32  FSSRSAVTAHTKAVHLGERPFV---------CHECGQSFASKGILQEHLTIHSDDAPWKC 82
           FS+   +  H   +     P           C   G+SF +K  L  H+ +H+ + P+ C
Sbjct: 35  FSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93

Query: 83  DI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSH 138
               C K   +  N            LK H   HTG++P+ C +  C R FAN S+ + H
Sbjct: 94  PFPGCGKIFARSEN------------LKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141

Query: 139 KR 140
             
Sbjct: 142 MH 143



 Score = 56.5 bits (137), Expect = 6e-11
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 17/95 (17%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDI--CSK 87
           F ++  +  H + VH GE+PF C    CG+ FA    L+ H   H+ + P+KC+   C +
Sbjct: 72  FKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
           +    +N S         D K H ++HT  +    
Sbjct: 131 R---FANSS---------DRKKHMHVHTSDKSGPS 153



 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 12/95 (12%), Positives = 18/95 (18%), Gaps = 21/95 (22%)

Query: 56  ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHT 115
             G S            I           C +                  +L  H  +  
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTF------------STMHELVTHVTMEH 49

Query: 116 GKRPYT---------CPWCSRTFANGSNCRSHKRR 141
              P           CP   ++F       +H R 
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84



 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCD 83
           F+    +  H +  H GE+PF C    C + FA+    ++H+ +H+ D      
Sbjct: 102 FARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154



 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 9/50 (18%), Positives = 14/50 (28%)

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           S G      K   +   +   +       C RTF+      +H    H  
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG 51


>1tf6_A Protein (transcription factor IIIA); complex (transcription
           regulation/DNA), RNA polymerase III, transcription
           initiation, zinc finger protein; HET: DNA; 3.10A
           {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
           g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
          Length = 190

 Score = 68.0 bits (167), Expect = 6e-15
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 18/115 (15%)

Query: 43  KAVHLGERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCD--ICSKKSLKLSNVSCG 98
           KA+ +  + ++C   +CG ++     LQ HL  H+ + P+ C    C K    L +    
Sbjct: 4   KALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHH---- 59

Query: 99  WYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                   L  H   HTG++ +TC    C   F   +N + H  R H  ++ +Y 
Sbjct: 60  --------LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV 106



 Score = 59.5 bits (145), Expect = 9e-12
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 15/118 (12%)

Query: 32  FSSRSAVTAHTKAVHLGER--PFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
           F++++ +  H        +   +VCH   CG++F     L+ H   H+   P++C     
Sbjct: 84  FTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC----- 137

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
                 +  C         LK H  +H G        CS      +    H    H +
Sbjct: 138 -----PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190


>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
           transcription, metal-binding, DNA, protein, nucleus,
           activator; 1.70A {Mus musculus} PDB: 2wbu_A
          Length = 89

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
                      CG+++     L+ HL  H+ + P+ CD             CGW    S 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW----------DGCGWKFARSD 51

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
           +L  H+  HTG RP+ C  C R F+   +   H +R
Sbjct: 52  ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87



 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
          +F+    +T H    H G RPF C +C ++F+    L  H+  H
Sbjct: 46 KFARSDELTRH-YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88


>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
           zipper, X-RAY crystallography, structure-based design,
           zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
           g.37.1.1 PDB: 1xf7_A
          Length = 88

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 13/93 (13%)

Query: 50  RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           +PF C  C ++F+    L  H+  H+ + P+ CDIC +K  +                K 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE------------RKR 49

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM 142
           H ++     P          +   +  +   R+
Sbjct: 50  HRDIQHIL-PILEDKVEELLSKNYHLENEVARL 81



 Score = 49.4 bits (119), Expect = 7e-09
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS    +T H +  H GE+PF C  CG+ FA     + H  I     P   D   +   K
Sbjct: 13  FSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILEDKVEELLSK 70

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTG 116
             ++         ++         G
Sbjct: 71  NYHL---------ENEVARLKKLVG 86


>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
           transcription factor, kruppel-like factor, GC-box
           promoter elements, structural genomics; NMR {Homo
           sapiens}
          Length = 100

 Score = 62.6 bits (153), Expect = 8e-14
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS 89
             S               R   C    C + +     L+ HL  H+ + P+KC       
Sbjct: 3   SGSSGPDLEK-------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW----- 50

Query: 90  LKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
                  C W    S +L  H+  HTG +P+ C  C+R+F+   +   H +R
Sbjct: 51  -----EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97



 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSD 76
           RF+    +T H +  H G +PF C  C +SF+    L  H+  H +
Sbjct: 56  RFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100


>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
           genomics, NPPSFA, national project on protein structural
           and functional analyses; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 79

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 13/87 (14%)

Query: 46  HLGERPFVC--HECGQSFASKGILQEHLTI-HSDDAPWKCDICSKKSLKLSNVSCGWYPD 102
             G     C    CG+ F+++  L  H    H     + C             +CG   +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP----------EPACGKSFN 51

Query: 103 ESKDLKNHHNLHTGKRPYTCPWCSRTF 129
             K LK H  LH+  R Y C +   + 
Sbjct: 52  FKKHLKEHMKLHSDTRDYICEFSGPSS 78



 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          FS+R  +  H K  H+ ++ F C E  CG+SF  K  L+EH+ +HSD   + C+    
Sbjct: 19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76



 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 114 HTGKRPYTCPW--CSRTFANGSNCRSHKRRMH 143
            +G     C +  C R F+N      HK+  H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33


>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
           protein-DNA complex, DNA-B metal-binding, nucleus; HET:
           DNA; NMR {Rattus norvegicus}
          Length = 82

 Score = 59.7 bits (146), Expect = 7e-13
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 52  FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH 111
           F C  CG+SF     L  HL IHSD  P+ C  C K+  + S+            +K H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSD------------MKKHT 49

Query: 112 NLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +HTG++P+ C  C + F+  SN  +H R
Sbjct: 50  FIHTGEKPHKCQVCGKAFSQSSNLITHSR 78


>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
           structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 77

 Score = 59.5 bits (145), Expect = 8e-13
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 15/80 (18%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHS--DDAPWKCDICSKKSLKLSNVSCGWYPD 102
            H GE+P+ C+ C   F   G ++ H+      + A + C  C                 
Sbjct: 9   THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDT--------VIA---- 56

Query: 103 ESKDLKNHH-NLHTGKRPYT 121
              DL  H    H+   P +
Sbjct: 57  RKSDLGVHLRKQHSYSGPSS 76



 Score = 55.2 bits (134), Expect = 4e-11
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 65  GILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG--KRPYTC 122
           G        HS + P++C IC  +  +               +K H           + C
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGT------------MKMHILQKHTENVAKFHC 48

Query: 123 PWCSRTFANGSNCRSHKRRMH 143
           P C    A  S+   H R+ H
Sbjct: 49  PHCDTVIARKSDLGVHLRKQH 69



 Score = 44.0 bits (105), Expect = 5e-07
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             +    H+G++PY C  C   F      + H  + H E +  + 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH 47


>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
           genomics, NPPSFA, national project on protein structural
           and functional analyses; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 86

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 16/89 (17%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIH----SDDAPWKCDICSKKSLKLSNVSCGWY 100
            H GE+P+ C  C ++F  K +L  H   +       A + C  C K   + +       
Sbjct: 9   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT------ 62

Query: 101 PDESKDLKNHHNLHTGKRPYTCPWCSRTF 129
                 +  H +   G           + 
Sbjct: 63  ------MARHADNCAGPDGVEGENSGPSS 85



 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 5/60 (8%)

Query: 32 FSSRSAVTAHTKAVHLGE----RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          F  +  +  H K  +         FVC +CG++F  +  +  H    +     + +    
Sbjct: 25 FRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP 83



 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL--KLYE-SSLGKIF 158
             +    HTG++PY C  C +TF        H +R H        +  S  GK F
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTF 57


>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
           binding, transcription, C2H2 type zinc finger,
           structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 70

 Score = 57.9 bits (141), Expect = 2e-12
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 44  AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDE 103
           +      P  C EC  S +SK  L+ H  IH  D P+KC+ CS  + + SN         
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSN--------- 52

Query: 104 SKDLKNHHNLHTGKRPYTCP 123
              L  H     G       
Sbjct: 53  ---LSKHMKKFHGDMSGPSS 69


>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
           structural genomics consortiu PSI-biology, protein
           structure initiative; NMR {Homo sapiens}
          Length = 74

 Score = 57.5 bits (140), Expect = 5e-12
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 13/85 (15%)

Query: 36  SAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV 95
                H   +   ++P+ C  C  SF  KG L  H T+H+ + P++C+IC  +  + +N 
Sbjct: 3   HHHHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN- 60

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPY 120
                      LK H  +H+G++PY
Sbjct: 61  -----------LKTHTRIHSGEKPY 74



 Score = 48.6 bits (117), Expect = 1e-08
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 67  LQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS 126
              H  +   D P+KCD C        N            L +H  +HTG++PY C  C 
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGN------------LASHKTVHTGEKPYRCNICG 52

Query: 127 RTFANGSNCRSHKR 140
             F   +N ++H R
Sbjct: 53  AQFNRPANLKTHTR 66



 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                +H ++    +PY C  C  +F    N  SHK 
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38


>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
           genomics, NPPSFA, national project on protein structural
           and functional analyses; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 72

 Score = 55.9 bits (136), Expect = 1e-11
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDES 104
           +H GE+P+ C ECG++F+   IL +H  +H+ + P+KC  C K   + S           
Sbjct: 8   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSG---------- 57

Query: 105 KDLKNHHNLHTGKRPY 120
             L NH  +HT     
Sbjct: 58  --LINHQRIHTSGPSS 71


>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens}
          Length = 78

 Score = 55.5 bits (134), Expect = 3e-11
 Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 16/89 (17%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDA---PWKCDICSKKSLKLSNVSCGWYPD 102
             G     C  CG +   K  L  H   H++      + C+ C K+  K  +        
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDS-------- 53

Query: 103 ESKDLKNHHNL-HTGKRPYTCPWCSRTFA 130
               +  H +  H             +  
Sbjct: 54  ----VAAHRSKSHPALLLAPQESSGPSSG 78



 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 31 RFSSRSAVTAHTK--AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
              ++++  H +  A  +    F C  CG+ F     +  H +             S  
Sbjct: 16 TCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75

Query: 89 S 89
          S
Sbjct: 76 S 76



 Score = 33.1 bits (76), Expect = 0.007
 Identities = 6/27 (22%), Positives = 10/27 (37%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +G     C  C  T    ++   H+R
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR 28


>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
           helix, transcription/DNA complex; HET: DNA; 2.80A
           {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
          Length = 66

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 13/99 (13%), Positives = 22/99 (22%), Gaps = 38/99 (38%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             GE  + C  C + +        H                                   
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSH------------------------------ 34

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP 144
                       + Y CP+C + F    N  +H + +H 
Sbjct: 35  --------KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65



 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             G+  Y C  CSR + + SN   H    H   +K+Y 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42



 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 31 RFSSRSAVTAHTK-AVHLGERPFVCHECGQSFASKGILQEHLTIH 74
           ++  S    H   +     + + C  C + F  K  +  H+ I 
Sbjct: 19 VYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63


>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
           domain containing protein 16, structural genomics,
           NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
          Length = 77

 Score = 53.2 bits (129), Expect = 2e-10
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 13/87 (14%)

Query: 34  SRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLS 93
           S  +     +      R + C ECG+SF+    L +H   H+ + P+KCD C K  ++ S
Sbjct: 2   SSGSSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 94  NVSCGWYPDESKDLKNHHNLHTGKRPY 120
           +            L  HH +HTG  P 
Sbjct: 61  H------------LIGHHRVHTGSGPS 75



 Score = 42.0 bits (100), Expect = 4e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWK 81
          FS  S ++ H +  H GE+P+ C ECG++F  +  L  H  +H+   P  
Sbjct: 28 FSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76



 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           S            +R Y C  C ++F++ S+   H+R
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 39


>2j7j_A Transcription factor IIIA; zinc finger module, alternative
           initiation, nuclear protein, phosphorylation,
           hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
           laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
           2hgh_A
          Length = 85

 Score = 51.5 bits (124), Expect = 1e-09
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 52  FVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           +VCH   CG++F     L+ H   H+   P++C           +  C         LK 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC----------PHEGCDKRFSLPSRLKR 51

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           H  +H G        CS      +    H    H
Sbjct: 52  HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85



 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          F   + +  H +  H  + P+ C    C + F+    L+ H  +H+     K D CS 
Sbjct: 13 FKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 69



 Score = 32.2 bits (74), Expect = 0.015
 Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 1/40 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEH 70
          RFS  S +  H K VH G        C     +  +  +H
Sbjct: 42 RFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKH 80


>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
          finger domain, structural genomics, NPPSFA; NMR {Homo
          sapiens} SCOP: g.37.1.1
          Length = 54

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHL-TIHSDDAPWKCDICSK 87
           +     +P++C  CG+ F+    L  H+  +H+ + P KC +   
Sbjct: 4  GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49



 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFAS 63
          FS    +  H K VH  ERP  C       +S
Sbjct: 22 FSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53



 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           +  +  +  +PY C  C + F+   +   H +++H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36


>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
           cerevisiae} SCOP: g.37.1.1 g.37.1.1
          Length = 60

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 40/94 (42%)

Query: 50  RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           R FVC  C ++FA +    EHL  H                                   
Sbjct: 1   RSFVCEVCTRAFARQ----EHLKRH----------------------------------- 21

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
            +  HT ++PY C  C+R F        H +++H
Sbjct: 22  -YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54



 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL-TIHS 75
          F+ +  +  H    H  E+P+ C  C ++F  + +L  H   IHS
Sbjct: 12 FARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55


>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GERP+ C+ECG++F     L EHL  H  +     
Sbjct: 4  GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43



 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G+RPY C  C + F   S+   H  + H  E K    S G
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFRE-KSSGPSSG 46


>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GERPF C+ECG+ F  +  L  HL +HS +     
Sbjct: 4  GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43



 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G+RP+ C  C + F   S+   H  R+H  E K    S G
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHSRE-KSSGPSSG 46


>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 45

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++PF C  CG+SF +KG L  H  IH+ +     
Sbjct: 6  SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43



 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C ++F    N  +H+R
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33


>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+PF C ECG+ F +      H   HS + P    
Sbjct: 6  SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44



 Score = 37.5 bits (88), Expect = 8e-05
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++P+ C  C + F   S C SH+R
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33


>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F     L  H  +H+ + P   
Sbjct: 6  SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43



 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++P+ C  C + F   S   SH+R
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33


>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+P+ C ECG+ +  +  L  H  +H+ +      
Sbjct: 6  SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  +G++PY C  C + +    +   H +R+H  E KL   S G
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVHTGE-KLSGPSSG 46


>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+PF C  CG+SF  +  L  H  +H+ + P    
Sbjct: 4  GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44



 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C ++F   S    H  
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33



 Score = 32.8 bits (76), Expect = 0.004
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 12/53 (22%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
             +  + + P+KCDIC K     S             L  H  +HT ++P   
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSR------------LNRHSMVHTAEKPSGP 43


>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
           finger, dimer, protein-DNA complex, cooperativity,
           transcription/DNA complex; 2.35A {Mus musculus} SCOP:
           g.37.1.1 g.37.1.1
          Length = 73

 Score = 44.2 bits (105), Expect = 5e-07
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
           SC      S +L  H  +HTG++P+ C  C R F+   +  +H R 
Sbjct: 26  SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71



 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
               + +  +        RP+ C    C + F+    L  H+ IH+   P++C IC + 
Sbjct: 2  EPHPMNNLLNYV---VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58



 Score = 34.2 bits (79), Expect = 0.003
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS 75
          RFS    +T H + +H G++PF C  C ++F+    L  H+  H+
Sbjct: 30 RFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73



 Score = 33.8 bits (78), Expect = 0.004
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 4/43 (9%)

Query: 101 PDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRR 141
           P    +L N+  +    RPY CP   C R F+       H R 
Sbjct: 3   PHPMNNLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIRI 43


>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 44

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+PF C  C ++F+SK  L  H   H+++ P   
Sbjct: 2  SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41



 Score = 31.0 bits (71), Expect = 0.017
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
            +G++P+ C  C + F++ S    H+ + H EE K    S G
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEE-KPSGPSSG 44


>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P++C+ECG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F   S+   H+R
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33


>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GERP  C+ECG+SF     L +H  IH+ + P   
Sbjct: 6  SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG+RP+ C  C ++F   ++   H+R
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR 33


>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G + F C ECG++F  K  L  H  IH+ + P   
Sbjct: 6  SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG + + C  C + F   S    H++
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33


>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE PF+C ECG+ F  K  L  H  IH+ + P   
Sbjct: 6  SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43



 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG+ P+ C  C + F + +N   H++
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQK 33


>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+S+  +  L +H  +H+ + P   
Sbjct: 6  SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++P+ C  C +++    +   H+R
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33


>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          PDB: 2yta_A
          Length = 42

 Score = 43.0 bits (102), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
            GE P++C +CG+SF  +G L  H    S   P
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39



 Score = 33.4 bits (77), Expect = 0.002
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G+ PY C  C ++F    +   H+R
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR 32


>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
          protein, phosphorylation, polymorphism, repeat,
          repressor, transcription; NMR {Homo sapiens} SCOP:
          k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
              E+P+ C +CG+ +  +  L  H  +H  +     
Sbjct: 6  SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43



 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  + ++PY C  C + +    N   H+R
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33


>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GER + C ECG++FA K  L  H  IH+ + P   
Sbjct: 6  SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG+R Y C  C + FA  S    H +R+H  E K    S G
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMH-QRIHTGE-KPSGPSSG 46


>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE P+ CHECG++F+ K  L  H   H+ + P   
Sbjct: 6  SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+ PY C  C + F+      SH+R
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQR 33


>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
          structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
          k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+PF C +CG++F+    L +H  IH+ + P   
Sbjct: 1  GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43



 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++P+ C  C + F++      H+ R+H  E K    S G
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGE-KPSGPSSG 46


>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
          protein, phosphorylation, polymorphism, repeat,
          repressor, transcription; NMR {Homo sapiens} SCOP:
          k.12.1.1 PDB: 2ena_A 2en4_A
          Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F+ +  L  H  +H+ + P   
Sbjct: 6  SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C + F+  S    H +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33


>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F  +  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43



 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F + SN  +H++
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33


>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+SF  K  L+ H   H+ +     
Sbjct: 6  SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43



 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C ++F   S  R H++
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33


>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
           genomics, NPPSFA; NMR {Homo sapiens}
          Length = 95

 Score = 44.2 bits (104), Expect = 8e-07
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 5/79 (6%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLT-IHSDDAPWKCDICSKKSLKLSNVSCGWYPDE 103
           +   +       C ++F++   L  H+T  H         +C  +       S       
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSF----KA 74

Query: 104 SKDLKNHHNLHTGKRPYTC 122
              L NH  +HTG++    
Sbjct: 75  KYKLVNHIRVHTGEKSGPS 93



 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHEC--------GQSFASKGILQEHLTIHSDDAPWKC 82
           FS+   +  H    H+G      H C        G+SF +K  L  H+ +H+ +     
Sbjct: 34 TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93



 Score = 27.2 bits (60), Expect = 1.2
 Identities = 8/49 (16%), Positives = 15/49 (30%), Gaps = 3/49 (6%)

Query: 98  GWYPDESKDLKNHHN---LHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           G      + +K   +   +   +       C RTF+      +H    H
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49


>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
          protein, phosphorylation, polymorphism, repeat,
          repressor, transcription; NMR {Homo sapiens}
          Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            +GE+ + C EC   F+    L+ H  +H  + P   
Sbjct: 6  SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43



 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   G++ + C  C   F+  S+ R H+ 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33


>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F+ K IL  H   H+ + P   
Sbjct: 6  SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++PY C  C +TF+  S   +H+R
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33



 Score = 24.8 bits (55), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          FS +S ++AH +  H GE+P     
Sbjct: 22 FSQKSILSAHQR-THTGEKPSGPSS 45


>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens}
          Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G+RP+ C ECG++F +K  L  H   H+ + P   
Sbjct: 6  SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43



 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+RPY C  C + F   S+   H+R
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRR 33



 Score = 25.2 bits (56), Expect = 2.3
 Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F ++S++  H +  H GE+P     
Sbjct: 22 FKTKSSLICHRR-SHTGEKPSGPSS 45


>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
          metal-binding, nuclear protein, repeat, transcription,
          transcription regulation; NMR {Homo sapiens} SCOP:
          k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
          Length = 42

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE P+ C ECG++F  K  L  H   H+ ++    
Sbjct: 5  SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41



 Score = 30.2 bits (69), Expect = 0.035
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +G+ PY C  C + F       SH+R
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQR 31



 Score = 23.2 bits (51), Expect = 9.7
 Identities = 5/23 (21%), Positives = 10/23 (43%), Gaps = 1/23 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVC 54
          F+ +  + +H +  H GE     
Sbjct: 20 FNRKDQLISHQR-THAGESGPSS 41


>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GER + C ECG++F  K  L  H  IH  + P   
Sbjct: 6  SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+R Y C  C + F   S    H+R
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQR 33


>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F     L  H  +H+ + P   
Sbjct: 6  SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43



 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G++P+ C  C + F   S+  SH +R+H  E K    S G
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGE-KPSGPSSG 46


>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            +GE+ + C  CG+ F+    LQ H  +H+ + P   
Sbjct: 6  SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   G++ Y C  C + F+  S+ ++H+R
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR 33


>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 42.6 bits (101), Expect = 9e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+PF C ECG +F+    L +HL  H    P    
Sbjct: 4  GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44



 Score = 37.6 bits (88), Expect = 7e-05
 Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++P+ C  C   F+   +   H  R H         S G
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERT-DPSGPSSG 46


>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+ + C ECG+SF+    L +H  +HS + P   
Sbjct: 6  SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43



 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++ Y C  C ++F+       H+R
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33


>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++FA K  L +H  IH+ + P   
Sbjct: 6  SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43



 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + FA  +N   H+R
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33


>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GERP++C  CG++F  +  L +H  IH+ + P   
Sbjct: 6  SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43



 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+RPY C  C + F + SN   H++
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33


>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+ + C+ECG+ F+    L +H  IH+ + P   
Sbjct: 6  SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++ Y C  C + F+  S    H++
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33


>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 44

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+VC+ECG++F SK  L  H   H+ ++    
Sbjct: 6  SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43



 Score = 35.5 bits (83), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG +PY C  C + F + S    H R
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33


>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG++F     L  HL IH+ + P   
Sbjct: 6  SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++P+ C  C + F    +  SH R
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33


>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+P+ C+ECG+ F     L  H  +H+   P   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+   H RR+H    K    S G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVHTGG-KPSGPSSG 46


>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C ECG+SF+    L +H   H+ + P   
Sbjct: 4  GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 7/31 (22%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   G++PY C  C ++F+       H  
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33


>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+P+ C+ CG++F     L +HL +H+ +      
Sbjct: 6  SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TG++PY+C  C + F   ++   H  R+H +E  L   S G
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQE-TLSGPSSG 46


>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE+P  C ECG++F  K  L  H   H DD     
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43



 Score = 33.3 bits (77), Expect = 0.003
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++P  C  C + F   S    H+ R H ++ K    S G
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDD-KHSGPSSG 46


>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F+SK  L  H+  HS + P   
Sbjct: 6  SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +   G++PY C  C + F++ S    H  R H  E K    S G
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGE-KPSGPSSG 46


>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
           binding, KIAA1227 protein, structural genomics; NMR
           {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
          Length = 107

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 15/99 (15%)

Query: 48  GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDL 107
            +  + C  C    +S      H  +  + A   C  CS +               S +L
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFF-------------SPEL 57

Query: 108 KNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           K  H      +  TC  C RTF +  +   H+  +H + 
Sbjct: 58  KQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96



 Score = 30.3 bits (67), Expect = 0.11
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 4/66 (6%)

Query: 23 YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
          Y   L   + SS     +H +         VC  C   F S  + QEH +   +     C
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTC 72

Query: 83 DICSKK 88
            C + 
Sbjct: 73 LECMRT 78



 Score = 25.2 bits (54), Expect = 7.2
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 30 TRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEH-LTIHSDDA 78
           RF S      H        +   C EC ++F S   +  H + +H+ + 
Sbjct: 50 LRFFSPELKQEHE--SKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNN 97


>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG+ F  +  L  H  +H+ + P   
Sbjct: 6  SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43



 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F    +  +H  
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33


>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+ + SK  L  H  +H+ + P   
Sbjct: 6  SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + + +  N   H++
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33


>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
          metal-binding, nuclear protein, repeat, transcription,
          transcription regulation; NMR {Homo sapiens}
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            G  P+ C +C +SF+ K  L  H  +H+ + P   
Sbjct: 7  GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +   G  PY C  C ++F+       H +RMH  E K    S G
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMHTRE-KPSGPSSG 46



 Score = 23.7 bits (52), Expect = 9.6
 Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVC 54
          FS +  +  H + +H  E+P   
Sbjct: 22 FSGKLRLLVHQR-MHTREKPSGP 43


>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
          Length = 46

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG+SF     L +H  +HS + P   
Sbjct: 6  SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43



 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F   S    H+R
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33



 Score = 24.5 bits (54), Expect = 4.2
 Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F   S +  H + VH GE+P     
Sbjct: 22 FRWASCLLKHQR-VHSGEKPSGPSS 45


>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C ECG++F     L EH  IH+   P   
Sbjct: 4  GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++PY C  C + F   ++   H+R
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33


>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P++C ECG++F  +  L +H  IH+   P   
Sbjct: 6  SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43



 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F   SN   H++
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33


>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F +   L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F   SN  +H+ 
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33


>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43



 Score = 34.1 bits (79), Expect = 0.001
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C ++F   S    H +R+H  E      S G
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIHTGE-NPSGPSSG 46


>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F + S    H+R
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33



 Score = 24.8 bits (55), Expect = 3.3
 Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F   S ++ H + +H GE+P     
Sbjct: 22 FRHNSYLSRH-QRIHTGEKPSGPSS 45


>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+P+ C  C ++F+    L +H  +HS + P   
Sbjct: 1  GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43



 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F++ ++   H+R
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33


>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 44

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE P+ C ECG+ F+ K  L  H   HS  +    
Sbjct: 7  GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43



 Score = 31.3 bits (72), Expect = 0.012
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+ PY C  C + F+      SH++
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQK 33


>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F       +H  +H+   P   
Sbjct: 6  SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43



 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F + S+C  H+R
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33


>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
          metal-binding, nuclear protein, repeat, transcription,
          transcription regulation; NMR {Homo sapiens} SCOP:
          k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+ C +C ++F+ K  L  H   H+   P   
Sbjct: 6  SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG +PY C  C++TF+  S    H+R
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR 33


>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F ++  L  H   HS + P   
Sbjct: 6  SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+   H+   H  E K    S G
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGE-KPSGPSSG 46


>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG++F  K  L  H   H+ +     
Sbjct: 6  SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F   S    H++
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ 33


>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  C ++F  K  L +H   H+ + P   
Sbjct: 6  SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43



 Score = 34.4 bits (80), Expect = 0.001
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  CS+ F   ++   H++
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33



 Score = 25.2 bits (56), Expect = 2.2
 Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F+ ++ +  H K  H GE+P     
Sbjct: 22 FTQKAHLAQHQK-THTGEKPSGPSS 45


>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          PDB: 2eoi_A
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+SF+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43



 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++P+ C  C ++F+  S   +H+R
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQR 33


>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  C +SF     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43



 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F  GS+   H+R
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33



 Score = 32.1 bits (74), Expect = 0.008
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 12/53 (22%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
             +  + + P+KCD+C K     S+            L  H  +HTG++P   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSS------------LTVHQRIHTGEKPSGP 43



 Score = 24.8 bits (55), Expect = 3.4
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F   S++T H + +H GE+P     
Sbjct: 22 FRYGSSLTVH-QRIHTGEKPSGPSS 45


>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43



 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++PY C  C + F   S+  +H R
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33



 Score = 23.6 bits (52), Expect = 8.3
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F+  S +T H   +H GE+P     
Sbjct: 22 FTQNSHLTNH-WRIHTGEKPSGPSS 45


>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+VC  CG++F     L  H  IH+ + P   
Sbjct: 6  SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43



 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++PY C +C + F   +    H+R
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33


>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C++CG++F+ +  L  H  IH+   P   
Sbjct: 6  SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43



 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F+  S+  +H+ 
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33


>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++ F C+EC ++F     L  H  IH+ + P   
Sbjct: 6  SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   GK+ + C  C +TF   S+   H+R
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33


>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C EC ++F +K  L  H   H+ + P   
Sbjct: 6  SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43



 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TG++P+ C  C + F   SN   H +R H  E K    S G
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGE-KPSGPSSG 46


>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          PDB: 2ysv_A
          Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F+    L +H  +H+ + P   
Sbjct: 6  SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43



 Score = 33.6 bits (78), Expect = 0.002
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F+  ++   H +R+H  E K    S G
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVHTGE-KPSGPSSG 46


>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ CHECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43



 Score = 34.0 bits (79), Expect = 0.002
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F   S+   H+ 
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33


>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P++C+ECG++F+    L  H  IH+ + P   
Sbjct: 6  SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43



 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG +PY C  C + F+  S+  +H+ 
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33


>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 44

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+EC ++F +K  L  H   H+ ++    
Sbjct: 6  SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43



 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F   SN   H+R
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33


>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F     LQEH  IH+ + P   
Sbjct: 6  SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F + S  + H+R
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33


>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+   P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43



 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+  +H+ R+H    K    S G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGV-KPSGPSSG 46


>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+ C+ECG++F+    L  H  +H+ + P   
Sbjct: 6  SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG +PY C  C + F+  S    H+ R+H  E K    S G
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGE-KPSGPSSG 46


>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F   S+   H+ 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33


>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43



 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F+  S    H+R
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33


>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            G++P+ C EC ++F   G L +H  +H+ +     
Sbjct: 7  GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43



 Score = 34.1 bits (79), Expect = 0.002
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +GK+PY C  C +TF    +   HKR
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKR 33



 Score = 25.2 bits (56), Expect = 2.4
 Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 1/25 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE 56
          F     +  H + VH GER      
Sbjct: 22 FIQIGHLNQHKR-VHTGERSSGPSS 45


>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +     +   CHECG+ F  K  L +H  IH+ + P   
Sbjct: 4  GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43



 Score = 33.3 bits (77), Expect = 0.003
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +  + + C  C R F   S+   H+R
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33


>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 42

 Score = 40.9 bits (97), Expect = 4e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
               GE+P+ C  CG  F     L+ HL IH
Sbjct: 3  SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34



 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C   F +    +SH R
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR 32


>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
           structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
           k.12.1.1
          Length = 47

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TGK+PY C  C + F   ++   H R  H  E K    S G
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47



 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHL-TIHSDDAPWKC 82
             G++P+ C ECG++F     L  H    H+ + P   
Sbjct: 6  SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44



 Score = 27.5 bits (62), Expect = 0.36
 Identities = 6/23 (26%), Positives = 11/23 (47%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVC 54
          F   +++  H +  H GE+P   
Sbjct: 22 FIQNTSLIRHWRYYHTGEKPSGP 44



 Score = 26.0 bits (58), Expect = 1.4
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 13/55 (23%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH-NLHTGKRPYTCP 123
             +  +   P++C  C K  ++ ++            L  H    HTG++P    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTS------------LIRHWRYYHTGEKPSGPS 45


>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43



 Score = 34.1 bits (79), Expect = 0.001
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F   S    H++
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ 33


>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG++F     L +H ++HS + P   
Sbjct: 6  SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+   H   +H  E +    S G
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGE-RPSGPSSG 46


>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43



 Score = 33.2 bits (77), Expect = 0.003
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+   H+  +H  E K    S G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGE-KPSGPSSG 46


>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43



 Score = 34.0 bits (79), Expect = 0.001
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TGK+PY C  C + F   S+   H+  +H  E K    S G
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGE-KPSGPSSG 46


>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG++F+ +  L  H  IHS   P   
Sbjct: 6  SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43



 Score = 33.6 bits (78), Expect = 0.002
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F++  +   H+R
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33


>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GER   C +CG+ F       +H  IH+ + P   
Sbjct: 4  GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43



 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +   G+R + C  C + F   SN   H+R
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33


>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P  C ECG+SF+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43



 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++P+ C  C ++F+  S    H+R
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33


>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
           early growth response protein 1, TGFB-inducible early
           growth response protein 1; NMR {Homo sapiens}
          Length = 72

 Score = 40.8 bits (96), Expect = 9e-06
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 16/79 (20%)

Query: 67  LQEHLTIHSDDAPWKCDI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW 124
                   S      C    C K   K S+            LK H   HTG++P++C W
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSH------------LKAHTRTHTGEKPFSCSW 52

Query: 125 --CSRTFANGSNCRSHKRR 141
             C R FA       H+R 
Sbjct: 53  KGCERRFARSDELSRHRRT 71



 Score = 33.9 bits (78), Expect = 0.003
 Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 2/40 (5%)

Query: 104 SKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRR 141
           S          +  R + C    C +T+   S+ ++H R 
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT 41



 Score = 32.7 bits (75), Expect = 0.009
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 12/81 (14%)

Query: 36  SAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLS 93
           S+ ++  +      R  +C    CG+++     L+ H   H+ + P+ C           
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW--------- 52

Query: 94  NVSCGWYPDESKDLKNHHNLH 114
              C      S +L  H   H
Sbjct: 53  -KGCERRFARSDELSRHRRTH 72


>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 44

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F  K +L  H   H+  +    
Sbjct: 6  SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43



 Score = 34.0 bits (79), Expect = 0.002
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++PY C  C + F   S    H+R
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHER 33


>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: k.12.1.1
          Length = 42

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
             GE+P+ C +CG++F+ KG L  H+ +H+   P
Sbjct: 5  SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39



 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C + F+   +   H R
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32


>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
           ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
           3znf_A 4znf_A
          Length = 57

 Score = 40.1 bits (93), Expect = 1e-05
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 12/65 (18%)

Query: 52  FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH 111
           ++C ECG       +L++H+  H+D  P+ C  C+       N            L  H 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGN------------LTKHM 49

Query: 112 NLHTG 116
                
Sbjct: 50  KSKAH 54



 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 15/49 (30%), Positives = 20/49 (40%)

Query: 97  CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           CG    +   LK H   HT  RPY C +C+ +F    N   H +     
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55



 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS 75
          R    S +  H +  H   RP+ C  C  SF +KG L +H+   +
Sbjct: 10 RXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53


>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 46

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+   C ECG++F     L+ H  +H  +      
Sbjct: 4  GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44



 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G++ +TC  C + F   S  R H+ R+H  E K    S G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGE-KCSGPSSG 46



 Score = 26.4 bits (59), Expect = 0.91
 Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 12/53 (22%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
             +  S +    CD C K    +S             L+ H  +H G++    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISA------------LRIHQRVHMGEKCSGP 43


>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 42

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C EC ++F+    L +H  +H+  +    
Sbjct: 2  SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41



 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
            +G++PY+C  C  TF++ +    H ++MH  +
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQH-QKMHTVK 36


>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 44

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
               + + C+ECG++F     L  H  IH+  +    
Sbjct: 6  SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43



 Score = 33.3 bits (77), Expect = 0.002
 Identities = 6/31 (19%), Positives = 12/31 (38%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  T  + Y C  C + F    +   H++
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33



 Score = 26.4 bits (59), Expect = 0.95
 Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 12/54 (22%)

Query: 69  EHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
              +  +D   + C+ C K   ++ +            L  H  +HT K   + 
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFH------------LTRHQKIHTRKSGPSS 43


>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 42

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIH 74
             GE+P+ C  CG  F     L+ H+ IH
Sbjct: 5  SSGGEKPYKCETCGARFVQVAHLRAHVLIH 34



 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C   F   ++ R+H  
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32



 Score = 34.0 bits (79), Expect = 0.002
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 12/52 (23%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYT 121
                  + P+KC+ C  + +++++            L+ H  +HTG  P +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAH------------LRAHVLIHTGSGPSS 41


>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          Length = 41

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
           +   G+R + C ECG+SF  KG L  H  IH
Sbjct: 2  SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33



 Score = 30.2 bits (69), Expect = 0.035
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +G+R Y C  C ++F    +   H+R
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHER 31


>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
          adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
          IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
          Length = 48

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 3/46 (6%)

Query: 40 AHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCD 83
          +       GE+PF C    CG  F+    L  H   HS   P    
Sbjct: 2  SSGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46



 Score = 35.0 bits (81), Expect = 7e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 109 NHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
           +  +  TG++P+ C W  C   F+       H+R
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR 35



 Score = 33.4 bits (77), Expect = 0.003
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 10/53 (18%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
             +  + + P+ C              CGW    S +L  H   H+G +P   
Sbjct: 3   SGSSGTGEKPFACTW----------PGCGWRFSRSDELSRHRRSHSGVKPSGP 45


>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens}
          Length = 44

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
           +   GE PF C +C + F  +  L +H   H+  + 
Sbjct: 4  GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40



 Score = 30.6 bits (69), Expect = 0.026
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +   G+ P+ C  C R F   +    H+R
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33



 Score = 24.4 bits (53), Expect = 5.2
 Identities = 8/50 (16%), Positives = 15/50 (30%), Gaps = 12/50 (24%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRP 119
             +  + + P+KC  C +   + +             L  H   H  K  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNY------------LVQHERTHARKSG 40


>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
          finger domain, structural genomics, NPPSFA; NMR {Homo
          sapiens} SCOP: g.37.1.1
          Length = 48

 Score = 36.5 bits (84), Expect = 2e-04
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 48 GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICS 86
            +   C  CG+ F     L  H   HS + P+     S
Sbjct: 9  TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47



 Score = 31.1 bits (70), Expect = 0.021
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 12/53 (22%)

Query: 74  HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS 126
                   C+IC K    + +            L  H   H+G++PY+    S
Sbjct: 7   GRTRKQVACEICGKIFRDVYH------------LNRHKLSHSGEKPYSSGPSS 47



 Score = 28.0 bits (62), Expect = 0.23
 Identities = 5/27 (18%), Positives = 10/27 (37%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
              ++   C  C + F +  +   HK 
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKL 33


>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens}
          Length = 73

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 19/86 (22%)

Query: 35  RSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSN 94
            S  +   + +HLG+R   C +CG  F          +  S      C+ C K S + + 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAA 54

Query: 95  VSCGWYPDESKDLKNHHNLHTGKRPY 120
                       L       +GK+  
Sbjct: 55  ------------LNKDEGNESGKKTS 68



 Score = 32.3 bits (73), Expect = 0.013
 Identities = 10/39 (25%), Positives = 11/39 (28%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM 142
           S        +H G R   C  C   F   S     K  M
Sbjct: 3   SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPM 41



 Score = 31.2 bits (70), Expect = 0.028
 Identities = 11/85 (12%), Positives = 21/85 (24%), Gaps = 20/85 (23%)

Query: 62  ASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYT 121
            S G   +   IH  D   KC  C    ++ S                     + ++   
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST-------------------LSRRKTPM 41

Query: 122 CPWCSRTFANGSNCRSHKRRMHPEE 146
           C  C +     +     +      +
Sbjct: 42  CEKCRKDSCQEAALNKDE-GNESGK 65


>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
          NMR {Mus musculus} SCOP: g.37.1.1
          Length = 35

 Score = 34.7 bits (79), Expect = 9e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSD 76
            G+RPFVC  C  +F +K     HL +H+D
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32



 Score = 30.9 bits (69), Expect = 0.019
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +GKRP+ C  C   F   +NC  H +
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLK 28


>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
           transcription factor, DNA binding protein; NMR {Mus
           musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
          Length = 37

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
                TG +P+ CP C R+F+   +   H++R
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33



 Score = 32.3 bits (74), Expect = 0.006
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIH 74
            G +PF C +C +SF+    L  H   H
Sbjct: 6  STGIKPFQCPDCDRSFSRSDHLALHRKRH 34


>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
           methyltransferase, guanylyltransferase, zinc finger,
           icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
           PDB: 2cse_V
          Length = 1275

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 9/49 (18%), Positives = 11/49 (22%), Gaps = 1/49 (2%)

Query: 30  TRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDA 78
              S   A              + CH C     S   L  H+  H    
Sbjct: 160 AIVSKHPARVGLPPTAS-SGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207



 Score = 28.3 bits (62), Expect = 1.4
 Identities = 6/30 (20%), Positives = 10/30 (33%), Gaps = 1/30 (3%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
            +    Y C  CS    +  +  +H    H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAH-VASH 203


>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
          Length = 129

 Score = 34.1 bits (77), Expect = 0.007
 Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 14/74 (18%)

Query: 70  HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTF 129
            L      + + C +C                  S  LK H  +   +    CP C + F
Sbjct: 65  RLLASKAISQFVCPLCLMPF------------SSSVSLKQH--IRYTEHTKVCPVCKKEF 110

Query: 130 ANGSNCRSHKRRMH 143
            +  +   H  + H
Sbjct: 111 TSTDSALDHVCKKH 124



 Score = 29.9 bits (66), Expect = 0.21
 Identities = 6/41 (14%), Positives = 12/41 (29%)

Query: 103 ESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           +                + CP C   F++  + + H R   
Sbjct: 58  DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE 98



 Score = 29.5 bits (65), Expect = 0.24
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 21  GKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL 71
            ++   L +  FSS  ++  H   +   E   VC  C + F S     +H+
Sbjct: 73  SQFVCPLCLMPFSSSVSLKQH---IRYTEHTKVCPVCKKEFTSTDSALDHV 120


>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc
          finger, classical zinc finger, transcription; NMR {Homo
          sapiens}
          Length = 30

 Score = 30.9 bits (69), Expect = 0.017
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHS 75
          +P+VC  C + FA  G LQ H+ IH+
Sbjct: 2  KPYVCIHCQRQFADPGALQRHVRIHT 27



 Score = 28.6 bits (63), Expect = 0.12
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKR 140
           +PY C  C R FA+    + H R
Sbjct: 2   KPYVCIHCQRQFADPGALQRHVR 24


>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 46

 Score = 29.4 bits (65), Expect = 0.085
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 44 AVHLGERPFVCHECGQSFASKGILQEHLTIHS 75
          +    E+ F C++C ++F+    L +H  IH+
Sbjct: 5  SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36


>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
           myristol group, icosahedral virus; HET: MYR; 3.30A
           {Grass carp reovirus} PDB: 3k1q_C 3k1q_B
          Length = 1214

 Score = 31.7 bits (71), Expect = 0.094
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 52  FVCHECGQSFASKGILQEHL-TIHSDDA 78
           +VC+ C   F++   L EHL + H DDA
Sbjct: 117 YVCNVCNARFSTMSALSEHLRSDHRDDA 144


>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          Length = 46

 Score = 28.6 bits (63), Expect = 0.17
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 49 ERPFVCHECGQSFASKGILQEHLTIH 74
          E+   C ECG+ F     L EH  +H
Sbjct: 10 EKSHQCRECGEIFFQYVSLIEHQVLH 35


>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens}
          Length = 37

 Score = 28.3 bits (62), Expect = 0.17
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           R Y+CP C ++F+     +SH +  HPE
Sbjct: 8   RSYSCPVCEKSFSEDRLIKSHIKTNHPE 35


>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
          {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
          1are_A
          Length = 29

 Score = 27.7 bits (62), Expect = 0.20
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 4/25 (16%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIH 74
          R FVC  C ++FA     QEHL  H
Sbjct: 1  RSFVCEVCTRAFAR----QEHLKRH 21



 Score = 25.4 bits (56), Expect = 1.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKR 140
           R + C  C+R FA   + + H R
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR 23


>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens}
          Length = 36

 Score = 27.9 bits (61), Expect = 0.21
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 49 ERPFVCHECGQSFASKGILQEHLTIHSDDA 78
           +  +C  CG+ F SKG L+ H  +H+ D 
Sbjct: 7  GKTHLCDMCGKKFKSKGTLKSHKLLHTADG 36


>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
          finger domain, structural genomics, NPPSFA; NMR {Homo
          sapiens} SCOP: g.37.1.1
          Length = 45

 Score = 28.3 bits (62), Expect = 0.22
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHS 75
            GE+P+ C  CG  F  K  +  H+  H 
Sbjct: 5  SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34



 Score = 25.3 bits (54), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +G++PY+CP C   F        H R
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVR 31


>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB
           protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus}
           SCOP: g.50.1.1
          Length = 134

 Score = 29.5 bits (65), Expect = 0.29
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 41  HTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWY 100
             +   LG    VC +C ++  +K       + +     W C IC ++  ++   S  W+
Sbjct: 62  GEQLGMLGSASVVCEDCKKNVCTKC--GVETSNNRPHPVWLCKICLEQR-EVWKRSGAWF 118

Query: 101 PDE 103
              
Sbjct: 119 FKG 121


>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding
           protein, DNA deadenylas hydrolase; 1.80A
           {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
          Length = 204

 Score = 29.3 bits (65), Expect = 0.41
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 3/34 (8%)

Query: 49  ERPFVCHECGQSFASK-GILQEHLTIHSDDAPWK 81
           +    C  CG++F      L+ HL    DD  W 
Sbjct: 167 QEDLKCWRCGETFGRHFTKLKAHLQEEYDD--WL 198


>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
          photosynthetic reaction center, peripheral antenna;
          HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
          Length = 154

 Score = 29.1 bits (64), Expect = 0.41
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 4/22 (18%)

Query: 59 QSFASKGILQEHLTIHSDD-AP 79
          Q+   K  LQ  L +++DD AP
Sbjct: 20 QAL-KK--LQASLKLYADDSAP 38



 Score = 28.4 bits (62), Expect = 0.69
 Identities = 7/16 (43%), Positives = 10/16 (62%), Gaps = 3/16 (18%)

Query: 145 EELKLYESSLGKIFLY 160
           + LK  ++SL K  LY
Sbjct: 20  QALKKLQASL-K--LY 32


>3ray_A PR domain-containing protein 11; structural genomics consortium,
           SGC, histone methylation, Zn transcriptional regulation,
           chromatin, transcription; 1.73A {Homo sapiens}
          Length = 237

 Score = 29.4 bits (65), Expect = 0.51
 Identities = 4/29 (13%), Positives = 10/29 (34%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIH 74
             GE+     +  Q   +   L+  + + 
Sbjct: 203 ARGEKRLQREKSEQVLDNPEDLRGPIHLS 231



 Score = 28.6 bits (63), Expect = 0.75
 Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 7/49 (14%)

Query: 99  WYPDE-------SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           WY ++             H NL  G++        +   N  + R    
Sbjct: 181 WYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229


>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
          national project on protein structural and functional
          analyses; NMR {Homo sapiens}
          Length = 44

 Score = 26.8 bits (58), Expect = 0.60
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 48 GERPFVCHECGQSFASKGILQEHLTIHSDDA 78
           +    C ECG+ F    +L EH  +H+ ++
Sbjct: 9  AKTTSECQECGKIFRHSSLLIEHQALHAGES 39


>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative
           C-like transposable element, structural genomics,
           NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
          Length = 73

 Score = 27.5 bits (60), Expect = 0.72
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 3/36 (8%)

Query: 121 TCPWCSRTFA---NGSNCRSHKRRMHPEELKLYESS 153
            C  C    A   N SN   H  + HPEE   +  S
Sbjct: 31  YCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKS 66


>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
          metal-binding, transcription; NMR {Mus musculus}
          Length = 28

 Score = 26.3 bits (57), Expect = 0.77
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHS 75
          RP+ C  CG+ F+ K  ++ H  +H+
Sbjct: 2  RPYSCSVCGKRFSLKHQMETHYRVHT 27


>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
          SCOP: g.37.1.1 PDB: 1va2_A
          Length = 31

 Score = 26.0 bits (58), Expect = 0.95
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 50 RPFVCH--ECGQSFASKGILQEHLTIHS 75
          RPF+C    CG+ F     LQ H   H+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHT 28



 Score = 25.3 bits (56), Expect = 1.6
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 118 RPYTCPW--CSRTFANGSNCRSHKR 140
           RP+ C W  C + F      + HKR
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKR 25


>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
          {Saccharomyces cerevisiae} SCOP: g.37.1.1
          Length = 30

 Score = 26.0 bits (57), Expect = 0.99
 Identities = 5/21 (23%), Positives = 11/21 (52%)

Query: 50 RPFVCHECGQSFASKGILQEH 70
          + + C  C ++F  + +L  H
Sbjct: 1  KAYACGLCNRAFTRRDLLIRH 21



 Score = 25.2 bits (55), Expect = 1.7
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKRRMH 143
           + Y C  C+R F        H +++H
Sbjct: 1   KAYACGLCNRAFTRRDLLIRHAQKIH 26


>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
           {Saccharomyces cerevisiae} SCOP: g.37.1.1
          Length = 32

 Score = 25.7 bits (56), Expect = 1.1
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 118 RPYTCPW--CSRTFANGSNCRSHKR 140
           RPY+C    C + F    +   HK+
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKK 26



 Score = 23.8 bits (51), Expect = 6.5
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)

Query: 49 ERPFVCH--ECGQSFASKGILQEHLTIHSDDA 78
          +RP+ C    C ++F     L  H   H + A
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32


>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          Length = 98

 Score = 27.2 bits (59), Expect = 1.2
 Identities = 8/32 (25%), Positives = 11/32 (34%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHL 71
           H +     +    C  C + F SK  L  H 
Sbjct: 43 KHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74



 Score = 27.2 bits (59), Expect = 1.3
 Identities = 10/79 (12%), Positives = 21/79 (26%)

Query: 75  SDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSN 134
             +  W+  I  +        +           K+       +    C  C + F + + 
Sbjct: 10  GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAG 69

Query: 135 CRSHKRRMHPEELKLYESS 153
              H    H  +    E+S
Sbjct: 70  LNYHTMAEHSAKPSDAEAS 88


>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
           4-stranded parallel/anti-parallel beta- sheet,
           structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
           g.37.1.1
          Length = 102

 Score = 27.0 bits (59), Expect = 1.3
 Identities = 6/36 (16%), Positives = 12/36 (33%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           +      +  Y C +C+    + +    H    HP 
Sbjct: 9   NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPN 44



 Score = 24.7 bits (53), Expect = 9.4
 Identities = 10/54 (18%), Positives = 15/54 (27%), Gaps = 4/54 (7%)

Query: 97  CGWYPDESKDLKNH-HNLHTGKR---PYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           C +   +      H  + H        Y C  C+           H  + HP E
Sbjct: 24  CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77


>3nw0_A Non-structural maintenance of chromosomes element homolog; E3
           ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
          Length = 238

 Score = 27.4 bits (60), Expect = 2.0
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           +++ +           C  C      G +C +   RMH
Sbjct: 167 EMEQYIRETYPDAVKICNICHSLLIQGQSCETCGIRMH 204


>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
          transcription factor, DNA-binding, DNA-directed RNA
          polymerase; 4.30A {Saccharomyces cerevisiae}
          Length = 197

 Score = 27.3 bits (60), Expect = 2.1
 Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 12/34 (35%)

Query: 48 GERPFVCHECGQSFASKGILQEHLTIHSDDAP-W 80
          G+   VC  CG       +L + L    D    W
Sbjct: 41 GDV--VCALCGL------VLSDKLV---DTRSEW 63



 Score = 26.9 bits (59), Expect = 3.1
 Identities = 20/106 (18%), Positives = 30/106 (28%), Gaps = 40/106 (37%)

Query: 28  MVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD-ICS 86
           M+TR S      A  +  +L      C EC               I    +  + D +C+
Sbjct: 1   MMTRESIDK--RAGRRGPNLNIV-LTCPECKVYPP---------KIVERFS--EGDVVCA 46

Query: 87  KKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCP-WCSRTFAN 131
                     CG    +         + T         W  RTF+N
Sbjct: 47  ---------LCGLVLSD-------KLVDTR------SEW--RTFSN 68


>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A
           {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1
          Length = 722

 Score = 27.4 bits (61), Expect = 2.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 121 TCPWCSRTFANGSNCRSHKRRMHPEELK 148
           TCP+C      G  C    R + PE L 
Sbjct: 142 TCPYCGAEDQKGDQCEVCGRPLTPEILI 169


>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
           C2H2, APO metal-binding, nucleus, phosphoprotein,
           transcription, TRAN regulation; 1.80A {Homo sapiens}
          Length = 48

 Score = 25.1 bits (54), Expect = 2.7
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 117 KRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
            +PY C  C + + N      H    H  E
Sbjct: 5   DKPYACDICGKRYKNRPGLSYHYAHSHLAE 34


>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
           structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
           g.37.1.1 g.37.1.1
          Length = 96

 Score = 26.0 bits (56), Expect = 3.0
 Identities = 6/33 (18%), Positives = 13/33 (39%)

Query: 111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           H  +  +  +TC  C +   + +  + H    H
Sbjct: 54  HMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH 86



 Score = 25.2 bits (54), Expect = 7.2
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 48 GERPFVCHECGQSFASKGILQEHL 71
           +  F CH CG+   S   ++ H+
Sbjct: 59 KQEMFTCHHCGKQLRSLAGMKYHV 82


>3lu0_C DNA-directed RNA polymerase subunit beta; E. coli RNA polymerase,
            nucleotidyltransferase, transcription, transferase;
            11.20A {Escherichia coli} PDB: 3iyd_C*
          Length = 1342

 Score = 27.4 bits (61), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 66   ILQEHLTIHSDD 77
             LQE LT+ SDD
Sbjct: 1286 TLQEMLTVKSDD 1297


>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue;
           Zn-binding domain, rossmann fold domain; HET: MYK NAD;
           2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
          Length = 290

 Score = 26.9 bits (60), Expect = 3.4
 Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 7/50 (14%)

Query: 41  HTKA-----VHL-GE-RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           H  +     + L G     VC  C +      I+ +  +      P +C 
Sbjct: 137 HEASGNTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECP 186


>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc
          finger, transcription; NMR {Homo sapiens}
          Length = 26

 Score = 24.3 bits (52), Expect = 3.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIH 74
          +P+VC  CG+ F     L  H+  H
Sbjct: 1  KPYVCERCGKRFVQSSQLANHIRHH 25


>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic}
           SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
          Length = 30

 Score = 24.4 bits (52), Expect = 3.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           + Y C +C    A+ SN ++H +  H +E
Sbjct: 1   KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29


>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix
           bundle, carboxylate bridge, metalloenzyme,
           oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri}
           SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A*
           3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A*
           3n1y_A* 3rnb_A 3rng_A 3rna_A
          Length = 491

 Score = 26.9 bits (59), Expect = 4.2
 Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 9/54 (16%)

Query: 79  PWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC-PWCSRTFAN 131
           P  C++C        N+     P    ++K++   + G+  +         F  
Sbjct: 393 PTICNMC--------NLPIAHTPGNKWNVKDYQLEYEGRLYHFGSEADRWCFQI 438


>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding,
          structural genomics, NPPSFA; NMR {Homo sapiens}
          Length = 43

 Score = 24.4 bits (52), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 52 FVCHECGQSFASKGILQEH-LTIHSDDA 78
          F C+EC   F+ +  L+ H L  HSD +
Sbjct: 11 FFCNECDCRFSEEASLKRHTLQTHSDKS 38


>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB,
           immune system/cytokine complex; 1.90A {Homo sapiens}
           SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A*
           1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
          Length = 306

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 11/79 (13%), Positives = 18/79 (22%)

Query: 65  GILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW 124
           GI    +     +   K  +  +        +C W    S DL        G        
Sbjct: 88  GIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVT 147

Query: 125 CSRTFANGSNCRSHKRRMH 143
           C     +    R   +   
Sbjct: 148 CGAATLSAERVRGDNKEYE 166


>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
           protein; NMR {Homo sapiens}
          Length = 37

 Score = 24.2 bits (53), Expect = 4.6
 Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 115 TGKRPYTCPW--CSRTFANGSNCRSHKRR 141
             K+ + C    C + +   S+ R+H R 
Sbjct: 4   GKKKQHICHIQGCGKVYGKTSHLRAHLRW 32


>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB,
           RAB27B, effector, SLP homology domain, acetylation,
           lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
          Length = 153

 Score = 26.1 bits (56), Expect = 4.7
 Identities = 12/59 (20%), Positives = 16/59 (27%), Gaps = 6/59 (10%)

Query: 47  LGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
           L      C EC                H ++  W CD C      +   S  WY    +
Sbjct: 81  LLNSRRQCLECSLFVCKSC-----SHAHPEEQGWLCDPCHLAR-VVKIGSLEWYYQHVR 133


>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain
           associated with ring and TRAF domains protein 1,
           malignant 62; NMR {Homo sapiens}
          Length = 76

 Score = 24.9 bits (54), Expect = 5.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 105 KDLKNHHNLHTGKRPYTCPWCSRTFA 130
           +DL  H      KR   C +C   F+
Sbjct: 30  RDLPAHLQHDCPKRRLKCEFCGCDFS 55


>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens}
          Length = 36

 Score = 24.0 bits (51), Expect = 6.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 52 FVCHECGQSFASKGILQEHLTIHSDD 77
          F C  C + F  K  LQ HL IH+++
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNE 35


>2jl6_1 50S ribosomal protein L28, 50S ribosomal protein L25; methylation,
           translation, paromomycin, tRNA-binding, tRNA, zinc,
           mRNA, ribosome, repressor, RNA-binding; 3.45A {Thermus
           thermophilus} PDB: 2jl8_1
          Length = 89

 Score = 25.0 bits (54), Expect = 7.3
 Identities = 4/38 (10%), Positives = 13/38 (34%)

Query: 81  KCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKR 118
            C+I  K+ +  +++           +       + +R
Sbjct: 4   VCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRR 41


>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
          NPPSFA, national project on protein structural and
          functional analyses; NMR {Homo sapiens}
          Length = 36

 Score = 23.6 bits (50), Expect = 7.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHSDD 77
          +P+ C +C  + A K  L  HL  H+ +
Sbjct: 8  KPYKCPQCSYASAIKANLNVHLRKHTGE 35


>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete
           chrysosporium}
          Length = 352

 Score = 25.9 bits (57), Expect = 8.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 120 YTCPWCSRT 128
           Y CPW +RT
Sbjct: 84  YACPWATRT 92


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
           programmed cell death; HET: DTP; 6.90A {Drosophila
           melanogaster} PDB: 3iz8_A*
          Length = 1221

 Score = 26.0 bits (56), Expect = 8.8
 Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 38/116 (32%)

Query: 12  AGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVH---LGE--RPF--------VCHECG 58
            G       GK  +AL V    S          +    L     P         + ++  
Sbjct: 159 LGS------GKTWVALDVCL--SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210

Query: 59  QSFASKGILQEHLTIHSDDA-----------PWK-C-----DICSKKSLKLSNVSC 97
            ++ S+     ++ +                P++ C     ++ + K+    N+SC
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266


>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
           NPPSFA, national project on protein structural and
           functional analyses; NMR {Homo sapiens}
          Length = 75

 Score = 24.2 bits (52), Expect = 9.0
 Identities = 8/23 (34%), Positives = 10/23 (43%), Gaps = 1/23 (4%)

Query: 105 KDLKNHHNLHTGKRPYTCPWCSR 127
             LK H + + G R   C  C R
Sbjct: 30  LKLKEHED-YCGARTELCGNCGR 51


>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C
           family, structural genomics, PSI- protein structure
           initiative; 2.10A {Corynebacterium glutamicum}
          Length = 362

 Score = 25.6 bits (56), Expect = 9.1
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 120 YTCPWCSRT 128
             CPW  RT
Sbjct: 68  RACPWAHRT 76


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.321    0.133    0.432 

Gapped
Lambda     K      H
   0.267   0.0747    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,464,387
Number of extensions: 127977
Number of successful extensions: 1268
Number of sequences better than 10.0: 1
Number of HSP's gapped: 925
Number of HSP's successfully gapped: 554
Length of query: 166
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 79
Effective length of database: 4,272,666
Effective search space: 337540614
Effective search space used: 337540614
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.2 bits)