RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16929
         (172 letters)



>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis
           mellifera) [TaxId: 7460]}
          Length = 134

 Score =  106 bits (265), Expect = 1e-30
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 24/128 (18%)

Query: 57  FTGTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDA-------- 108
           + GT WCG G+ +   ++ G F   D+CCR HD+CP+ + A  +K+ LTN A        
Sbjct: 3   YPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCD 62

Query: 109 --------------NPLAIEVGIAYFDILKPMCFRFDFPRIGCKKFFGDTEQCAEFEMDL 154
                            +  VG  YF+++   C++ + P  GC +      +C  + +D 
Sbjct: 63  CDDKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHPVTGCGER--TEGRCLHYTVDK 120

Query: 155 TKAKKWQW 162
           +K K +QW
Sbjct: 121 SKPKVYQW 128


>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia
           russellii pulchella), different isoforms [TaxId: 97228]}
          Length = 121

 Score = 24.5 bits (53), Expect = 5.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 80  DIDSCCRDHDLCPENIVAKSTKYNL 104
             D CC  HD C  N+   + K + 
Sbjct: 39  ATDRCCFVHDCCYGNLPDCNPKSDR 63


>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus),
          pancreas [TaxId: 9913]}
          Length = 123

 Score = 23.8 bits (51), Expect = 9.1
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 6/30 (20%)

Query: 62 WCGTGDIARDISDTGIFHDIDSCCRDHDLC 91
          +CG G     +       D+D CC+ HD C
Sbjct: 28 YCGLGGSGTPV------DDLDRCCQTHDNC 51


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0588    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 675,749
Number of extensions: 30285
Number of successful extensions: 99
Number of sequences better than 10.0: 1
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 25
Length of query: 172
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 93
Effective length of database: 1,322,926
Effective search space: 123032118
Effective search space used: 123032118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.3 bits)