Query psy16934
Match_columns 96
No_of_seqs 104 out of 191
Neff 4.6
Searched_HMMs 46136
Date Fri Aug 16 17:26:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05826 Phospholip_A2_2: Phos 100.0 1E-37 2.2E-42 212.6 -1.3 66 18-83 1-66 (99)
2 cd04704 PLA2_bee_venom_like PL 100.0 1.7E-36 3.7E-41 206.4 2.6 66 17-82 1-66 (97)
3 cd04705 PLA2_group_III_like PL 99.8 6.6E-22 1.4E-26 136.0 1.6 50 34-83 25-74 (100)
4 cd00618 PLA2_like PLA2_like: P 99.7 1.3E-17 2.7E-22 107.7 2.2 62 19-82 1-75 (83)
5 smart00085 PA2c Phospholipase 99.1 2.8E-11 6E-16 84.4 2.4 58 15-82 16-73 (117)
6 cd04706 PLA2_plant PLA2_plant: 98.3 2.5E-07 5.5E-12 65.4 1.4 48 21-83 24-71 (117)
7 cd00125 PLA2c PLA2c: Phospholi 96.9 9.5E-05 2.1E-09 51.8 -1.7 31 23-59 25-55 (115)
8 cd04707 otoconin_90 otoconin_9 96.9 0.00014 3E-09 51.3 -1.2 18 41-58 34-51 (117)
9 PF08398 Parvo_coat_N: Parvovi 96.3 0.0007 1.5E-08 43.6 -0.7 40 19-61 1-41 (64)
10 KOG4087|consensus 95.8 0.0017 3.8E-08 47.5 -0.6 28 31-58 38-75 (144)
11 PF00068 Phospholip_A2_1: Phos 92.1 0.021 4.5E-07 39.5 -1.6 31 23-59 26-56 (116)
12 PF08036 Antimicrobial_6: Diap 60.6 2.2 4.9E-05 25.0 -0.4 12 41-52 15-26 (39)
13 PF06951 PLA2G12: Group XII se 23.2 40 0.00087 25.6 0.9 35 18-57 75-112 (184)
14 PF04315 DUF462: Protein of un 21.7 48 0.001 24.9 1.1 23 22-44 50-72 (164)
15 PF05959 DUF884: Nucleopolyhed 21.0 80 0.0017 23.9 2.1 23 1-23 1-24 (186)
No 1
>PF05826 Phospholip_A2_2: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3.1.1.4 from EC) (PLA2) is a small lipolytic enzyme that releases fatty acids from the second carbon group of glycerol. It is involved in a number of physiologically important cellular processes, such as the liberation of arachidonic acid from membrane phospholipids []. It plays a pivotal role in the biosynthesis of prostaglandin and other mediators of inflammation. PLA2 has four to seven disulphide bonds and binds a calcium ion that is essential for activity. Within the active enzyme, the alpha amino group is involved in a conserved hydrogen-bonding network linking the N-terminal region to the active site. The side chains of two conserved residues, His and Asp, participate in the catalytic network. Many PLA2's are widely distributed in snakes, lizards, bees and mammals. In mammals there are at least four forms: pancreatic, membrane-associated as well as two less well characterised forms. The venom of most snakes contains multiple forms of PLA2. Some of them are presynaptic neurotoxins which inhibit neuromuscular transmission by blocking acetylcholine release from the nerve termini. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 1.; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process; PDB: 1POC_A.
Probab=100.00 E-value=1e-37 Score=212.60 Aligned_cols=66 Identities=42% Similarity=0.761 Sum_probs=50.5
Q ss_pred eecCcccccCCCCCCCCCCCCCCCccccccccCcCCCCccccCCccCccccCCCcccccccccccc
Q psy16934 18 KSIRTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTRRLRKFYWEK 83 (96)
Q Consensus 18 i~PGTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kygl~N~~~~TisHCdC~~ek 83 (96)
|+|||||||+||+|.+|+|||.+.+||+|||+||+||++|+|+++||||+|.++||+|||+|+.++
T Consensus 1 i~pGT~WCG~gn~a~~~~dlG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~~hC~Cd~~f 66 (99)
T PF05826_consen 1 IYPGTKWCGPGNIAKNYSDLGEFKETDRCCREHDHCPDKIPPGETKYGLHNPRPFTISHCDCDSRF 66 (99)
T ss_dssp B-TT-SSSBSS---SSTT---SSHHHHHHHHHHHT-SSEE-TT-EETTEE--SSS-EEBHHHHHHH
T ss_pred CCCCCcccCCCCCccCcccccccHHHHHHHHhhccCCCccCCCccccccccCCcCceeecCcccHH
Confidence 799999999999999999999999999999999999999999999999999999999999998873
No 2
>cd04704 PLA2_bee_venom_like PLA2_bee_venom_like: A sub-family of Phospholipase A2, similar to bee venom PLA2. PLA2 is a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers. Bee venom PLA2 has fewer conserved disulfide bridges than most canonical PLA2s.
Probab=100.00 E-value=1.7e-36 Score=206.40 Aligned_cols=66 Identities=47% Similarity=0.827 Sum_probs=64.2
Q ss_pred eeecCcccccCCCCCCCCCCCCCCCccccccccCcCCCCccccCCccCccccCCCccccccccccc
Q psy16934 17 FKSIRTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTRRLRKFYWE 82 (96)
Q Consensus 17 ~i~PGTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kygl~N~~~~TisHCdC~~e 82 (96)
+|+|||||||+||+|.+|+|||.+.+||+|||+||+||++|++++++||++|.++||++||+|+.+
T Consensus 1 ~~~pGTkWCG~Gn~a~~~~dlG~~~~tD~CCr~HD~C~~~i~~~~~kyg~~N~~~~t~~~C~CD~~ 66 (97)
T cd04704 1 FIVPGTKWCGPGNIATNYSDLGAFRETDKCCREHDHCPDIISAGEYKYGLTNTRLFTRSHCDCDNR 66 (97)
T ss_pred CccCCCeecCCCCCCCCcccccCccccchHHHccccCcCcccccccccCccCCCccccccCcHHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999765
No 3
>cd04705 PLA2_group_III_like PLA2_group_III_like: A sub-family of Phospholipase A2, similar to human group III PLA2. PLA2 is a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers.
Probab=99.83 E-value=6.6e-22 Score=136.00 Aligned_cols=50 Identities=20% Similarity=0.305 Sum_probs=47.7
Q ss_pred CCCCCCCCccccccccCcCCCCccccCCccCccccCCCcccccccccccc
Q psy16934 34 ISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTRRLRKFYWEK 83 (96)
Q Consensus 34 y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kygl~N~~~~TisHCdC~~ek 83 (96)
+.+||.+.+||+|||+||+||++|.+++++|||+|.++||+|||+|+.++
T Consensus 25 ~~~lG~~~~~DrCCR~HD~Cp~~I~~~~~k~gl~N~~~~tisHCdCD~rf 74 (100)
T cd04705 25 FLSEGEFKEPDRCCWKHKQCPGHIIPPFSSDGHHNFHLHSVSHCDCDSRL 74 (100)
T ss_pred ccccccccchhhhhhhhhcCccccCCcccccceecCCCcccccccHHHHH
Confidence 46899999999999999999999999999999999999999999998774
No 4
>cd00618 PLA2_like PLA2_like: Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately
Probab=99.68 E-value=1.3e-17 Score=107.73 Aligned_cols=62 Identities=27% Similarity=0.387 Sum_probs=57.1
Q ss_pred ecCcccccCCCCCCCCCCCCCCCccccccccCcCCCCccccCCccCc-------------cccCCCccccccccccc
Q psy16934 19 SIRTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYN-------------LTNDGSFTRRLRKFYWE 82 (96)
Q Consensus 19 ~PGTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kyg-------------l~N~~~~TisHCdC~~e 82 (96)
.|+++|||+|+.+.++.+.+ .+||+|||+||+|++.|...+.+++ +.|..+++++||+||.+
T Consensus 1 ~~ygc~CG~g~~~~~~g~p~--D~~D~CC~~HD~Cy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~C~CD~~ 75 (83)
T cd00618 1 LPYGCYCGPGGSACPSGQPV--DETDRCCRKHDCCYDQISDGGCCDGCLSYSFSEGGVTCLTNSDLCTRSHCDCDRR 75 (83)
T ss_pred CCcCcccCCCCcCCCCCCCC--CcchhhhhhCccHhhhhhccCCCCCcceeeecCCceeECCCCChhhHhhCcccHH
Confidence 47899999999998888876 7999999999999999999999888 78999999999999876
No 5
>smart00085 PA2c Phospholipase A2.
Probab=99.12 E-value=2.8e-11 Score=84.41 Aligned_cols=58 Identities=17% Similarity=0.080 Sum_probs=47.0
Q ss_pred eeeeecCcccccCCCCCCCCCCCCCCCccccccccCcCCCCccccCCccCccccCCCccccccccccc
Q psy16934 15 LDFKSIRTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTRRLRKFYWE 82 (96)
Q Consensus 15 ~~~i~PGTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kygl~N~~~~TisHCdC~~e 82 (96)
..++.+++.||+-|+.+.... ..+||+|||+||+|++.|++ +.-++ .++++||+|+..
T Consensus 16 ~~~~~y~~YGCyCG~gg~G~p----vD~~D~CC~~HD~Cy~~~~~-~~C~~-----~~~~y~~~c~~~ 73 (117)
T smart00085 16 RAWLSYGDYGCYCGWGGSGTP----VDATDRCCFVHDCCYGKAEK-EGCNP-----KTTTYSYSCDNG 73 (117)
T ss_pred CcccchhccCcccCCCCCCCc----cccccchhhhcCchhhhccc-CCCcc-----cccceEEEEECC
Confidence 456889999999999877653 78999999999999999987 44433 678888888644
No 6
>cd04706 PLA2_plant PLA2_plant: Plant-specific sub-family of Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers. This sub-family does not appear to have a conserved active site and metal-binding loop.
Probab=98.29 E-value=2.5e-07 Score=65.39 Aligned_cols=48 Identities=23% Similarity=0.367 Sum_probs=36.1
Q ss_pred CcccccCCCCCCCCCCCCCCCccccccccCcCCCCccccCCccCccccCCCcccccccccccc
Q psy16934 21 RTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTRRLRKFYWEK 83 (96)
Q Consensus 21 GTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~~~~kygl~N~~~~TisHCdC~~ek 83 (96)
-.+|||+|+.+.. ++..-..+|+||+.||+|.+.. ...+.+|+|+.++
T Consensus 24 YG~yCG~g~~g~~--~~~P~D~lD~CC~~HD~Cy~~~-------------~~~~~~c~C~~~f 71 (117)
T cd04706 24 YGKYCGPGYSGCP--GERPCDDLDACCMTHDACVQAK-------------KNDYLSLECNEKF 71 (117)
T ss_pred cCcccCCCCCCCC--CCCCcchhhHHHHhCcCcccCC-------------CCCcCCchHHHHH
Confidence 6799999987532 3345689999999999999754 1336788887654
No 7
>cd00125 PLA2c PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately to a block in
Probab=96.94 E-value=9.5e-05 Score=51.78 Aligned_cols=31 Identities=32% Similarity=0.761 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCCCCCCCCccccccccCcCCCCcccc
Q psy16934 23 KWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVA 59 (96)
Q Consensus 23 kWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~ 59 (96)
-|||.|..-.. -..+|+||+.||.|.+.+..
T Consensus 25 CyCG~GG~G~P------vD~~DrCC~~HD~CY~~~~~ 55 (115)
T cd00125 25 CYCGLGGSGTP------VDDTDRCCQVHDCCYDRAEK 55 (115)
T ss_pred CccCCCCCCCC------cccHHHHHHHHHhHHhcccc
Confidence 36777654322 24789999999999998753
No 8
>cd04707 otoconin_90 otoconin_90: Phospholipase A2-like domains present in otoconin-90 and otoconin-95, mammal proteins that are principal matrix proteins of calcitic otoconia. Interactions involving otoconin-90 may trigger or constitute key events in otoconia formation. The PLA2-like domains in otoconins may have lost their metal-binding sites.
Probab=96.88 E-value=0.00014 Score=51.26 Aligned_cols=18 Identities=33% Similarity=0.870 Sum_probs=16.0
Q ss_pred CccccccccCcCCCCccc
Q psy16934 41 HDIDSCCRDHDLCPENIV 58 (96)
Q Consensus 41 ~~TD~CCR~HD~Cp~~I~ 58 (96)
.++|+||..||.|.+.+.
T Consensus 34 D~~DrCC~~HD~CY~~~~ 51 (117)
T cd04707 34 DELDRCCFQHRCCLEQAS 51 (117)
T ss_pred ccchhHHHHhHHHHhhhh
Confidence 589999999999998764
No 9
>PF08398 Parvo_coat_N: Parvovirus coat protein VP1; InterPro: IPR013607 Parvoviruses are some of the smallest viruses containing linear, non-segmented single-stranded DNA genomes, with an average genome size of 5000 nucleotides. Parvoviruses have been described that infect a wide range of invertebrates and vertebrates and are well known for causing enteric disease in mammals. Genomes contains two large ORFs: NS1 and VP1; other ORFs are found in some sub-types and different gene products can arise from splice variants and the use of different start codons []. This is the N-terminal region of the Parvovirus VP1 coat protein []; its function is not known. ; GO: 0005198 structural molecule activity, 0019028 viral capsid
Probab=96.31 E-value=0.0007 Score=43.64 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=31.4
Q ss_pred ecCcccccCCCCCCCCCCCCCCCccccccccCcCCCCc-cccCC
Q psy16934 19 SIRTKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPEN-IVAKS 61 (96)
Q Consensus 19 ~PGTkWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~-I~~~~ 61 (96)
+||.+++||||.-.+-. --.++|..+|+||...+. |..+.
T Consensus 1 lPg~~YlGPgn~l~~g~---Pv~~~D~aA~~HD~aY~~~lk~G~ 41 (64)
T PF08398_consen 1 LPGYKYLGPGNPLDNGE---PVNPVDAAAREHDEAYDELLKHGD 41 (64)
T ss_pred CCCCCccCCCCCcCCCC---CCCHHHHHHHHHHHHHHHHHHcCC
Confidence 59999999999854443 346899999999988877 55553
No 10
>KOG4087|consensus
Probab=95.85 E-value=0.0017 Score=47.54 Aligned_cols=28 Identities=32% Similarity=0.719 Sum_probs=22.7
Q ss_pred CCCCCCCCCC----------CccccccccCcCCCCccc
Q psy16934 31 ARDISDTGIF----------HDIDSCCRDHDLCPENIV 58 (96)
Q Consensus 31 A~~y~dLG~~----------~~TD~CCR~HD~Cp~~I~ 58 (96)
|.+|+.+|.+ .++|+||.+||.|.+...
T Consensus 38 ~l~Y~~YGCyCGlGG~G~P~D~iDwCC~~HDcCY~~le 75 (144)
T KOG4087|consen 38 ALSYNKYGCYCGLGGSGQPKDAIDWCCHAHDCCYDRLE 75 (144)
T ss_pred cceecCccccccCCCCCCccchHHHHHhcccHHHHHHH
Confidence 6667776665 789999999999998765
No 11
>PF00068 Phospholip_A2_1: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3.1.1.4 from EC) (PLA2) is a small lipolytic enzyme that releases fatty acids from the second carbon group of glycerol. It is involved in a number of physiologically important cellular processes, such as the liberation of arachidonic acid from membrane phospholipids []. It plays a pivotal role in the biosynthesis of prostaglandin and other mediators of inflammation. PLA2 has four to seven disulphide bonds and binds a calcium ion that is essential for activity. Within the active enzyme, the alpha amino group is involved in a conserved hydrogen-bonding network linking the N-terminal region to the active site. The side chains of two conserved residues, His and Asp, participate in the catalytic network. Many PLA2's are widely distributed in snakes, lizards, bees and mammals. In mammals there are at least four forms: pancreatic, membrane-associated as well as two less well characterised forms. The venom of most snakes contains multiple forms of PLA2. Some of them are presynaptic neurotoxins which inhibit neuromuscular transmission by blocking acetylcholine release from the nerve termini. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 1.; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process; PDB: 1OQS_F 1S6B_B 1XXW_B 1MH2_B 2RD4_B 1OZ6_A 2OSN_A 2PH4_B 1FDK_A 2BP2_A ....
Probab=92.07 E-value=0.021 Score=39.52 Aligned_cols=31 Identities=35% Similarity=0.812 Sum_probs=22.5
Q ss_pred ccccCCCCCCCCCCCCCCCccccccccCcCCCCcccc
Q psy16934 23 KWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVA 59 (96)
Q Consensus 23 kWCG~Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I~~ 59 (96)
-|||.|.... .-.++|+|||.|+.|..-+..
T Consensus 26 CyCg~~g~G~------PvD~iD~~C~~h~~Cy~~~~~ 56 (116)
T PF00068_consen 26 CYCGFGGKGQ------PVDEIDRCCRKHDQCYKCAKE 56 (116)
T ss_dssp TTBSSSSSSS-------SSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCCCC------CcccccchhHHhHHHHHHHhc
Confidence 4888765321 246799999999999877655
No 12
>PF08036 Antimicrobial_6: Diapausin family of antimicrobial peptide; InterPro: IPR012525 This family consists of diapausin-related antimicrobial peptides. Diapause during periods of environmental adversity is an essential part of the life cycle of many organisms with the molecular basis being different among animals. Diapause-specific peptides provide anti-fungal activity and act as N-type voltage-gated calcium channel blocker [].; GO: 0050832 defense response to fungus, 0005576 extracellular region; PDB: 2E2F_A.
Probab=60.56 E-value=2.2 Score=25.04 Aligned_cols=12 Identities=42% Similarity=1.043 Sum_probs=9.7
Q ss_pred CccccccccCcC
Q psy16934 41 HDIDSCCRDHDL 52 (96)
Q Consensus 41 ~~TD~CCR~HD~ 52 (96)
.+-|.|||+|-+
T Consensus 15 ~Er~eCCrAhG~ 26 (39)
T PF08036_consen 15 PERDECCRAHGY 26 (39)
T ss_dssp TTTHHHHHHTT-
T ss_pred hhHHHHHHHcCc
Confidence 578999999975
No 13
>PF06951 PLA2G12: Group XII secretory phospholipase A2 precursor (PLA2G12); InterPro: IPR010711 This family consists of several group XII secretory phospholipase A2 precursor (PLA2G12) (3.1.1.4 from EC) proteins. Group XII and group V PLA(2)s are thought to participate in helper T cell immune response through release of immediate second signals and generation of downstream eicosanoids [].; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process, 0005576 extracellular region
Probab=23.16 E-value=40 Score=25.57 Aligned_cols=35 Identities=31% Similarity=0.727 Sum_probs=22.8
Q ss_pred eecCcccccC---CCCCCCCCCCCCCCccccccccCcCCCCcc
Q psy16934 18 KSIRTKWCGT---GDIARDISDTGIFHDIDSCCRDHDLCPENI 57 (96)
Q Consensus 18 i~PGTkWCG~---Gn~A~~y~dLG~~~~TD~CCR~HD~Cp~~I 57 (96)
..|=-+-||+ |.. ++. | ....-.||-+||.|.++=
T Consensus 75 k~p~~NGCGS~~~G~~---~d~-~-iP~~t~CCn~HDiCYdTC 112 (184)
T PF06951_consen 75 KPPEPNGCGSYFLGLQ---IDI-G-IPAMTKCCNQHDICYDTC 112 (184)
T ss_pred CCCCCCCCCCcccCCc---ccC-C-CCchhccchhhhhHHHcc
Confidence 3455667887 333 222 2 223778999999999874
No 14
>PF04315 DUF462: Protein of unknown function, DUF462; InterPro: IPR007411 This family consists of bacterial proteins of uncharacterised function.
Probab=21.72 E-value=48 Score=24.88 Aligned_cols=23 Identities=30% Similarity=0.622 Sum_probs=20.1
Q ss_pred cccccCCCCCCCCCCCCCCCccc
Q psy16934 22 TKWCGTGDIARDISDTGIFHDID 44 (96)
Q Consensus 22 TkWCG~Gn~A~~y~dLG~~~~TD 44 (96)
.-||-+|..-..-.|+|.+-..|
T Consensus 50 aHWciAG~~RR~l~DfGYWY~PD 72 (164)
T PF04315_consen 50 AHWCIAGPERRQLEDFGYWYCPD 72 (164)
T ss_pred HHHHhccccccccccCCCCcCCC
Confidence 57999999988899999997766
No 15
>PF05959 DUF884: Nucleopolyhedrovirus protein of unknown function (DUF884); InterPro: IPR009235 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf146; it is a family of uncharacterised viral proteins.
Probab=21.00 E-value=80 Score=23.94 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=20.5
Q ss_pred CceeeEEeCcc-ceeeeeeecCcc
Q psy16934 1 MSLQLYQVGYK-NYLLDFKSIRTK 23 (96)
Q Consensus 1 ~~~~~~q~~~~-~~l~~~i~PGTk 23 (96)
|..+|||-... +.++.|.+|.|.
T Consensus 1 MnvnLy~p~~~~~~~ItF~i~~t~ 24 (186)
T PF05959_consen 1 MNVNLYYPNSNDDNIITFQIPHTI 24 (186)
T ss_pred CeEEEecCCCCCCceEEEEEcCCC
Confidence 78999999988 899999999775
Done!