RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16934
(96 letters)
>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 134
Score = 78.4 bits (193), Expect = 8e-21
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 22 TKWCGTGDIARDISDTGIFHDIDSCCRDHDLCPENIVAKSTKYNLTNDGSFTR 74
T WCG G+ + ++ G F D+CCR HD+CP+ + A +K+ LTN S TR
Sbjct: 6 TLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTR 58
>d2v8qa1 d.129.6.2 (A:396-548) 5'-AMP-activated protein kinase
catalytic subunit alpha-1, AMPK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 153
Score = 44.6 bits (105), Expect = 1e-07
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 1 MSLQLYQVGYKNYLLDFKSIRTKWCGTGDIARDISDTG 38
MSLQLYQV + YLLDF+SI + +G
Sbjct: 52 MSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSG 89
>d2qrda1 d.129.6.2 (A:450-576) Snf1-like protein kinase ssp2
{Schizosaccharomyces pombe [TaxId: 4896]}
Length = 127
Score = 40.6 bits (95), Expect = 2e-06
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 1 MSLQLYQVGYKNYLLDFKS 19
+ LQLY+V ++LD KS
Sbjct: 68 IELQLYEVMPGCFMLDVKS 86
>d2qlva1 d.129.6.2 (A:460-630) Carbon catabolite-derepressing
protein kinase SNF1 {Saccharomyces cerevisiae [TaxId:
4932]}
Length = 171
Score = 39.6 bits (92), Expect = 8e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 1 MSLQLYQVGYKNYLLDFKSI 20
M +QL+Q+ NYL+DFK
Sbjct: 109 MVIQLFQIETNNYLVDFKFD 128
>d2nwia1 d.190.1.3 (A:1-160) Hypothetical protein AF1396
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 160
Score = 29.2 bits (65), Expect = 0.042
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 66 LTNDGSFTRRLRKFYWEK 83
+T DGS T + +K
Sbjct: 9 MTTDGSITAIIEAVTQKK 26
>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia
russellii pulchella), different isoforms [TaxId:
97228]}
Length = 121
Score = 24.9 bits (54), Expect = 1.4
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 42 DIDSCCRDHDLCPENIVAKSTKYNL 66
D CC HD C N+ + K +
Sbjct: 39 ATDRCCFVHDCCYGNLPDCNPKSDR 63
>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus),
pancreas [TaxId: 9913]}
Length = 123
Score = 24.2 bits (52), Expect = 2.4
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Query: 24 WCGTGDIARDISDTGIFHDIDSCCRDHDLC 53
+CG G + D+D CC+ HD C
Sbjct: 28 YCGLGGSGTPV------DDLDRCCQTHDNC 51
>d1tt8a_ d.190.1.1 (A:) Chorismate lyase {Escherichia coli [TaxId:
562]}
Length = 164
Score = 24.2 bits (52), Expect = 3.2
Identities = 4/13 (30%), Positives = 7/13 (53%)
Query: 66 LTNDGSFTRRLRK 78
L + S T+R +
Sbjct: 28 LLLEDSMTKRFEQ 40
>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern
cottonmouth snake (Agkistrodon piscivorus piscivorus)
[TaxId: 8716]}
Length = 121
Score = 23.8 bits (51), Expect = 3.4
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 42 DIDSCCRDHDLCPENIVAKSTKYNL 66
D CC H C + + + K +
Sbjct: 39 ATDRCCFVHKCCYKKLTDCNHKTDR 63
>d1mc2a_ a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pace snake
(Agkistrodon acutus) [TaxId: 36307]}
Length = 122
Score = 23.4 bits (50), Expect = 4.2
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 42 DIDSCCRDHDLCPENIVAKSTKYNL 66
D CC H C + + +K +
Sbjct: 39 ATDRCCFVHKCCYKKLTDCDSKKDR 63
>d1ae7a_ a.133.1.2 (A:) Snake phospholipase A2 {Mainland tiger
snake (Notechis scutatus scutatus), notexin [TaxId:
8663]}
Length = 119
Score = 23.4 bits (50), Expect = 4.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 42 DIDSCCRDHDLC 53
++D CC+ HD C
Sbjct: 40 ELDRCCKIHDDC 51
>d1m8ra_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon
halys) [TaxId: 8714]}
Length = 124
Score = 23.3 bits (50), Expect = 5.8
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 6/30 (20%)
Query: 24 WCGTGDIARDISDTGIFHDIDSCCRDHDLC 53
+CG G D CC HD C
Sbjct: 27 YCGWG------GQGRPQDATDRCCFVHDCC 50
>d1n28a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens),
synovial fluid [TaxId: 9606]}
Length = 124
Score = 23.0 bits (49), Expect = 7.4
Identities = 8/32 (25%), Positives = 9/32 (28%), Gaps = 6/32 (18%)
Query: 24 WCGTGDIARDISDTGIFHDIDSCCRDHDLCPE 55
CG G D CC D C +
Sbjct: 27 HCGVGGRGSPKDA------TDRCCVTQDCCYK 52
>d1m8ta_ a.133.1.2 (A:) Snake phospholipase A2 {King cobra
(Ophiophagus hannah), an acidic isoform [TaxId: 8665]}
Length = 119
Score = 22.5 bits (48), Expect = 8.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 42 DIDSCCRDHDLC 53
++D CC+ HD C
Sbjct: 40 ELDRCCQVHDNC 51
>d1jiaa_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon
halys) [TaxId: 8714]}
Length = 122
Score = 22.6 bits (48), Expect = 8.8
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 42 DIDSCCRDHDLC 53
D CC HD C
Sbjct: 39 ATDRCCFVHDCC 50
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.438
Gapped
Lambda K H
0.267 0.0562 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 371,970
Number of extensions: 14994
Number of successful extensions: 60
Number of sequences better than 10.0: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 32
Length of query: 96
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 37
Effective length of database: 1,597,526
Effective search space: 59108462
Effective search space used: 59108462
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.3 bits)