Query psy16939
Match_columns 174
No_of_seqs 155 out of 1208
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 17:33:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vch_A Hydroquinone glucosyltr 100.0 1.5E-31 5.2E-36 219.4 18.1 162 7-172 234-429 (480)
2 2c1x_A UDP-glucose flavonoid 3 100.0 1.1E-31 3.8E-36 219.0 14.7 162 8-173 239-413 (456)
3 3hbf_A Flavonoid 3-O-glucosylt 100.0 9.3E-32 3.2E-36 218.9 13.9 162 8-173 241-415 (454)
4 2o6l_A UDP-glucuronosyltransfe 100.0 1.5E-30 5.3E-35 185.8 18.2 149 18-173 6-155 (170)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.9E-30 6.6E-35 212.0 18.2 163 7-172 239-425 (463)
6 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6E-31 2.1E-35 215.9 14.7 147 22-173 284-440 (482)
7 3h4t_A Glycosyltransferase GTF 100.0 1.6E-27 5.5E-32 191.4 18.1 155 7-171 193-351 (404)
8 1rrv_A Glycosyltransferase GTF 100.0 8.2E-28 2.8E-32 193.4 15.6 157 8-173 210-370 (416)
9 1iir_A Glycosyltransferase GTF 100.0 1.7E-27 5.8E-32 191.6 15.8 155 8-173 211-369 (415)
10 2iya_A OLEI, oleandomycin glyc 99.9 5.2E-27 1.8E-31 188.9 14.9 162 5-173 228-390 (424)
11 4amg_A Snogd; transferase, pol 99.9 1E-26 3.5E-31 185.3 10.9 144 21-173 225-369 (400)
12 3rsc_A CALG2; TDP, enediyne, s 99.9 1.2E-25 4E-30 180.2 13.5 162 5-173 220-382 (415)
13 2yjn_A ERYCIII, glycosyltransf 99.9 3.7E-26 1.3E-30 185.1 8.4 150 20-173 254-404 (441)
14 3ia7_A CALG4; glycosysltransfe 99.9 1.1E-24 3.8E-29 173.3 15.0 162 5-173 204-367 (402)
15 2p6p_A Glycosyl transferase; X 99.9 4.2E-25 1.4E-29 175.5 9.6 148 21-173 198-348 (384)
16 4fzr_A SSFS6; structural genom 99.9 3.3E-24 1.1E-28 171.1 8.7 150 20-173 214-369 (398)
17 2iyf_A OLED, oleandomycin glyc 99.9 4E-23 1.4E-27 166.3 13.7 158 9-173 209-368 (430)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 1.3E-22 4.6E-27 161.3 9.5 147 22-173 207-357 (391)
19 3oti_A CALG3; calicheamicin, T 99.9 8.3E-23 2.8E-27 163.1 5.4 138 21-163 220-360 (398)
20 3otg_A CALG1; calicheamicin, T 99.9 5.5E-21 1.9E-25 152.7 13.9 136 32-173 242-377 (412)
21 2jzc_A UDP-N-acetylglucosamine 99.8 7.3E-21 2.5E-25 141.2 9.7 128 31-169 27-196 (224)
22 3s2u_A UDP-N-acetylglucosamine 99.8 2.3E-20 7.9E-25 148.1 9.2 135 32-173 180-325 (365)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 4.9E-16 1.7E-20 119.1 11.4 137 9-153 132-273 (282)
24 1f0k_A MURG, UDP-N-acetylgluco 99.4 2.7E-12 9.1E-17 100.5 10.6 131 32-169 183-322 (364)
25 2f9f_A First mannosyl transfer 98.7 1.9E-07 6.3E-12 66.1 10.2 129 32-174 22-164 (177)
26 1vgv_A UDP-N-acetylglucosamine 98.5 9.4E-08 3.2E-12 75.0 6.0 128 32-173 205-343 (384)
27 1v4v_A UDP-N-acetylglucosamine 98.5 2.2E-07 7.6E-12 72.8 7.1 127 32-173 198-335 (376)
28 4hwg_A UDP-N-acetylglucosamine 98.5 6.2E-07 2.1E-11 71.4 8.9 128 32-173 203-343 (385)
29 3dzc_A UDP-N-acetylglucosamine 98.4 4.9E-07 1.7E-11 72.1 6.2 128 32-173 230-368 (396)
30 3beo_A UDP-N-acetylglucosamine 98.3 2.1E-06 7.1E-11 67.0 8.5 128 32-173 205-343 (375)
31 3ot5_A UDP-N-acetylglucosamine 98.3 4.1E-07 1.4E-11 72.8 4.4 128 32-173 224-362 (403)
32 3okp_A GDP-mannose-dependent a 98.3 4.3E-07 1.5E-11 71.2 4.5 133 32-173 197-345 (394)
33 2iw1_A Lipopolysaccharide core 98.3 9E-06 3.1E-10 63.2 11.8 130 31-173 194-338 (374)
34 2x6q_A Trehalose-synthase TRET 98.2 9.5E-06 3.3E-10 64.3 9.9 131 32-173 230-380 (416)
35 3c48_A Predicted glycosyltrans 98.2 1.9E-05 6.5E-10 62.9 11.2 134 31-173 241-392 (438)
36 2gek_A Phosphatidylinositol ma 98.1 4.5E-06 1.5E-10 65.6 5.9 129 34-173 209-350 (406)
37 2bfw_A GLGA glycogen synthase; 98.1 3.1E-05 1E-09 55.1 9.7 129 33-173 36-182 (200)
38 2vsy_A XCC0866; transferase, g 98.0 1.7E-05 5.9E-10 65.4 9.0 133 33-173 377-523 (568)
39 2jjm_A Glycosyl transferase, g 98.0 1.6E-05 5.4E-10 62.5 7.2 132 32-173 210-351 (394)
40 3fro_A GLGA glycogen synthase; 98.0 5.8E-05 2E-09 59.7 10.5 136 27-173 246-397 (439)
41 2r60_A Glycosyl transferase, g 97.9 3.3E-05 1.1E-09 62.8 8.0 131 32-173 261-425 (499)
42 2hy7_A Glucuronosyltransferase 97.9 0.0002 6.7E-09 57.1 11.6 119 33-174 222-354 (406)
43 3qhp_A Type 1 capsular polysac 97.8 8.4E-06 2.9E-10 56.4 3.1 126 32-173 1-141 (166)
44 2iuy_A Avigt4, glycosyltransfe 97.8 1.7E-05 5.7E-10 61.3 4.5 125 33-171 162-307 (342)
45 2x0d_A WSAF; GT4 family, trans 97.8 5.3E-05 1.8E-09 60.7 7.1 83 84-173 293-380 (413)
46 3oy2_A Glycosyltransferase B73 97.8 4E-05 1.4E-09 60.6 6.3 130 32-173 183-356 (413)
47 3q3e_A HMW1C-like glycosyltran 97.7 9.2E-05 3.1E-09 62.1 8.0 134 33-172 441-588 (631)
48 4gyw_A UDP-N-acetylglucosamine 97.7 0.00031 1E-08 60.2 10.8 119 32-153 522-652 (723)
49 1rzu_A Glycogen synthase 1; gl 97.7 0.00027 9.2E-09 57.0 9.8 126 33-170 291-438 (485)
50 2xci_A KDO-transferase, 3-deox 97.6 0.00022 7.5E-09 56.2 7.9 81 86-172 260-346 (374)
51 2qzs_A Glycogen synthase; glyc 97.5 0.00038 1.3E-08 56.2 8.4 127 32-170 291-439 (485)
52 3s28_A Sucrose synthase 1; gly 96.5 0.004 1.4E-07 54.0 6.1 128 32-170 571-728 (816)
53 3rhz_A GTF3, nucleotide sugar 96.3 0.0086 3E-07 46.6 6.3 114 32-170 177-302 (339)
54 2iz6_A Molybdenum cofactor car 95.9 0.2 6.9E-06 35.2 11.4 134 21-172 35-174 (176)
55 3tov_A Glycosyl transferase fa 95.9 0.021 7.1E-07 44.5 6.8 136 32-172 185-347 (349)
56 1psw_A ADP-heptose LPS heptosy 95.7 0.022 7.6E-07 43.8 6.3 95 32-130 180-286 (348)
57 1rcu_A Conserved hypothetical 95.0 0.46 1.6E-05 33.9 10.8 95 22-132 49-150 (195)
58 2gt1_A Lipopolysaccharide hept 94.9 0.05 1.7E-06 41.5 6.0 130 32-172 178-322 (326)
59 1ydh_A AT5G11950; structural g 94.1 0.38 1.3E-05 34.9 8.7 135 21-168 31-186 (216)
60 1wek_A Hypothetical protein TT 93.2 1.2 3.9E-05 32.4 10.0 129 22-168 60-212 (217)
61 3sbx_A Putative uncharacterize 93.1 1.1 3.6E-05 31.9 9.4 117 22-148 35-165 (189)
62 3qua_A Putative uncharacterize 91.6 0.63 2.1E-05 33.3 6.7 100 22-131 44-154 (199)
63 1t35_A Hypothetical protein YV 91.2 2.5 8.7E-05 29.8 9.6 135 20-168 22-178 (191)
64 3vue_A GBSS-I, granule-bound s 90.9 0.48 1.7E-05 39.0 6.3 97 32-132 326-433 (536)
65 2i2c_A Probable inorganic poly 88.4 0.46 1.6E-05 35.6 4.0 30 103-132 34-69 (272)
66 3s2u_A UDP-N-acetylglucosamine 88.3 1.7 5.7E-05 33.7 7.3 93 33-130 3-121 (365)
67 2a33_A Hypothetical protein; s 86.7 7.1 0.00024 28.1 10.3 132 23-168 37-190 (215)
68 1yt5_A Inorganic polyphosphate 84.3 0.82 2.8E-05 33.9 3.4 54 103-172 40-96 (258)
69 2gk4_A Conserved hypothetical 82.6 5.6 0.00019 29.1 7.2 76 33-114 4-94 (232)
70 2pju_A Propionate catabolism o 77.8 2.1 7.3E-05 31.1 3.6 31 103-134 62-92 (225)
71 1eiw_A Hypothetical protein MT 77.6 2.8 9.5E-05 27.0 3.7 63 103-171 37-109 (111)
72 1weh_A Conserved hypothetical 76.8 2.6 9E-05 29.2 3.7 98 21-131 23-134 (171)
73 3bq9_A Predicted rossmann fold 76.4 16 0.00055 29.4 8.5 28 103-130 244-284 (460)
74 2an1_A Putative kinase; struct 74.6 2.4 8.3E-05 31.8 3.3 73 49-132 19-95 (292)
75 1uqt_A Alpha, alpha-trehalose- 73.6 4.9 0.00017 32.6 5.1 75 88-173 333-420 (482)
76 4fyk_A Deoxyribonucleoside 5'- 72.3 0.71 2.4E-05 31.6 -0.1 126 33-172 3-142 (152)
77 1u0t_A Inorganic polyphosphate 71.7 2.3 7.8E-05 32.3 2.5 80 50-132 19-107 (307)
78 1u7z_A Coenzyme A biosynthesis 71.2 17 0.00057 26.4 7.0 76 32-115 8-98 (226)
79 3grc_A Sensor protein, kinase; 70.0 14 0.0005 23.2 6.0 106 49-171 15-126 (140)
80 3t5t_A Putative glycosyltransf 69.6 13 0.00043 30.4 6.6 131 33-173 281-439 (496)
81 3nb0_A Glycogen [starch] synth 68.6 7 0.00024 33.4 5.0 33 98-132 514-550 (725)
82 3tpc_A Short chain alcohol deh 66.4 22 0.00074 25.6 6.9 75 32-115 7-92 (257)
83 4gud_A Imidazole glycerol phos 66.1 12 0.0004 26.3 5.2 30 32-70 3-32 (211)
84 3l4e_A Uncharacterized peptida 65.7 6 0.0002 28.2 3.6 91 20-131 15-120 (206)
85 3vtz_A Glucose 1-dehydrogenase 63.3 21 0.00071 26.1 6.3 70 32-114 14-91 (269)
86 3un1_A Probable oxidoreductase 62.3 38 0.0013 24.4 7.6 70 32-115 28-107 (260)
87 2q5c_A NTRC family transcripti 62.0 5.6 0.00019 28.1 2.8 39 102-141 49-87 (196)
88 1fy2_A Aspartyl dipeptidase; s 60.5 25 0.00085 25.3 6.2 86 20-131 21-120 (229)
89 3bfj_A 1,3-propanediol oxidore 60.4 14 0.00048 28.8 5.2 96 21-133 22-143 (387)
90 1z0s_A Probable inorganic poly 59.8 15 0.00053 27.5 5.0 55 53-132 42-99 (278)
91 4h15_A Short chain alcohol deh 58.6 48 0.0016 24.2 7.6 70 32-115 11-89 (261)
92 1o2d_A Alcohol dehydrogenase, 58.5 11 0.00038 29.3 4.2 96 22-133 31-149 (371)
93 3ce9_A Glycerol dehydrogenase; 58.5 19 0.00064 27.7 5.5 93 20-132 22-120 (354)
94 3s40_A Diacylglycerol kinase; 57.8 7.1 0.00024 29.4 2.9 67 50-132 25-97 (304)
95 3dhn_A NAD-dependent epimerase 57.5 32 0.0011 23.9 6.3 69 33-115 5-78 (227)
96 2fwm_X 2,3-dihydro-2,3-dihydro 57.0 34 0.0011 24.4 6.5 70 32-114 7-84 (250)
97 3trh_A Phosphoribosylaminoimid 56.6 37 0.0013 23.5 6.1 84 32-133 6-93 (169)
98 1xmp_A PURE, phosphoribosylami 56.6 23 0.00078 24.5 5.0 36 32-72 11-46 (170)
99 3ehd_A Uncharacterized conserv 56.6 40 0.0014 23.0 6.3 28 103-130 68-103 (162)
100 2f62_A Nucleoside 2-deoxyribos 56.6 11 0.00039 25.7 3.5 82 32-131 10-105 (161)
101 3ox4_A Alcohol dehydrogenase 2 56.3 3.6 0.00012 32.3 1.1 96 21-133 20-139 (383)
102 3rft_A Uronate dehydrogenase; 56.3 27 0.00091 25.3 5.8 66 33-114 4-74 (267)
103 3uhj_A Probable glycerol dehyd 56.2 10 0.00036 29.7 3.7 30 103-133 105-139 (387)
104 3ia7_A CALG4; glycosysltransfe 55.0 10 0.00035 28.9 3.5 36 33-73 6-41 (402)
105 1iuk_A Hypothetical protein TT 54.8 42 0.0014 22.0 9.2 114 20-151 3-121 (140)
106 3oow_A Phosphoribosylaminoimid 54.3 42 0.0014 23.1 6.0 83 32-132 5-91 (166)
107 3rg8_A Phosphoribosylaminoimid 54.0 14 0.00047 25.3 3.6 82 33-132 3-89 (159)
108 3m1a_A Putative dehydrogenase; 53.4 22 0.00075 25.9 5.0 75 32-115 5-90 (281)
109 3fwz_A Inner membrane protein 53.2 15 0.0005 23.9 3.6 107 32-154 8-125 (140)
110 2bon_A Lipid kinase; DAG kinas 51.8 8.2 0.00028 29.5 2.4 67 51-132 44-118 (332)
111 4b4k_A N5-carboxyaminoimidazol 51.7 15 0.0005 25.8 3.4 35 32-71 22-56 (181)
112 2qv7_A Diacylglycerol kinase D 50.7 11 0.00039 28.7 3.1 81 34-132 28-114 (337)
113 4b79_A PA4098, probable short- 50.3 70 0.0024 23.2 8.2 73 32-115 11-89 (242)
114 2ew8_A (S)-1-phenylethanol deh 50.3 39 0.0013 24.1 5.8 75 32-115 7-93 (249)
115 3llv_A Exopolyphosphatase-rela 49.8 29 0.00099 22.2 4.7 98 53-155 18-124 (141)
116 3gl9_A Response regulator; bet 49.6 42 0.0015 20.5 9.2 105 49-171 11-121 (122)
117 3pfn_A NAD kinase; structural 49.5 16 0.00055 28.6 3.7 80 49-131 52-139 (365)
118 3afo_A NADH kinase POS5; alpha 49.5 12 0.00041 29.5 3.1 30 103-132 113-147 (388)
119 3lp6_A Phosphoribosylaminoimid 48.9 34 0.0012 23.7 4.9 83 32-133 7-94 (174)
120 2duw_A Putative COA-binding pr 48.5 55 0.0019 21.5 9.0 113 21-151 4-121 (145)
121 3kuu_A Phosphoribosylaminoimid 48.4 51 0.0017 22.9 5.7 35 32-71 12-46 (174)
122 4grd_A N5-CAIR mutase, phospho 48.3 54 0.0018 22.7 5.8 35 32-71 12-46 (173)
123 1g63_A Epidermin modifying enz 48.2 65 0.0022 22.3 8.3 127 33-170 4-176 (181)
124 3lqk_A Dipicolinate synthase s 48.1 24 0.00081 25.0 4.2 52 121-172 120-186 (201)
125 3to5_A CHEY homolog; alpha(5)b 47.9 54 0.0018 21.2 9.2 105 49-171 21-132 (134)
126 2gkg_A Response regulator homo 47.5 38 0.0013 20.5 4.9 106 49-173 14-126 (127)
127 1ta9_A Glycerol dehydrogenase; 47.3 26 0.0009 28.1 4.8 28 104-132 145-177 (450)
128 3sxp_A ADP-L-glycero-D-mannohe 47.0 87 0.003 23.5 7.7 34 32-73 10-45 (362)
129 2gas_A Isoflavone reductase; N 46.9 80 0.0027 22.9 7.5 72 33-114 3-86 (307)
130 3rsc_A CALG2; TDP, enediyne, s 46.8 13 0.00044 28.7 2.9 93 32-131 21-147 (415)
131 3t6k_A Response regulator rece 46.3 52 0.0018 20.5 8.9 106 49-172 13-124 (136)
132 2o23_A HADH2 protein; HSD17B10 46.2 41 0.0014 24.0 5.4 75 32-115 12-97 (265)
133 3mcu_A Dipicolinate synthase, 45.5 32 0.0011 24.5 4.6 54 119-172 116-184 (207)
134 3i6i_A Putative leucoanthocyan 45.1 72 0.0025 23.8 6.9 74 33-114 11-93 (346)
135 3cf4_G Acetyl-COA decarboxylas 44.3 71 0.0024 21.5 6.3 46 20-71 24-69 (170)
136 3dqp_A Oxidoreductase YLBE; al 44.3 75 0.0026 21.8 9.5 67 34-115 2-74 (219)
137 3lua_A Response regulator rece 43.1 58 0.002 20.2 9.5 106 49-172 13-127 (140)
138 4id9_A Short-chain dehydrogena 42.7 84 0.0029 23.3 6.9 66 32-114 19-87 (347)
139 3gh1_A Predicted nucleotide-bi 42.5 81 0.0028 25.4 6.8 29 103-131 246-287 (462)
140 3c85_A Putative glutathione-re 42.3 62 0.0021 21.7 5.6 121 33-168 41-173 (183)
141 3k5i_A Phosphoribosyl-aminoimi 42.1 1.2E+02 0.0041 23.5 9.4 122 32-169 24-159 (403)
142 3e8x_A Putative NAD-dependent 41.8 41 0.0014 23.5 4.8 72 32-115 21-95 (236)
143 3gt7_A Sensor protein; structu 41.3 68 0.0023 20.5 9.8 105 49-171 16-126 (154)
144 3ors_A N5-carboxyaminoimidazol 41.3 75 0.0026 21.8 5.6 82 33-133 4-90 (163)
145 3qvo_A NMRA family protein; st 41.2 89 0.003 21.8 9.8 69 32-114 23-98 (236)
146 3tl4_X Glutaminyl-tRNA synthet 40.9 11 0.00038 26.5 1.5 29 138-171 103-131 (187)
147 3ruf_A WBGU; rossmann fold, UD 40.9 1.1E+02 0.0037 22.7 8.2 73 32-114 25-110 (351)
148 3v2g_A 3-oxoacyl-[acyl-carrier 40.7 43 0.0015 24.4 4.8 57 9-73 6-64 (271)
149 3uow_A GMP synthetase; structu 40.5 1.2E+02 0.0041 24.9 7.9 30 32-70 8-37 (556)
150 2bka_A CC3, TAT-interacting pr 40.3 91 0.0031 21.6 6.6 69 33-115 19-95 (242)
151 2buf_A Acetylglutamate kinase; 40.3 53 0.0018 24.6 5.3 48 23-73 17-67 (300)
152 4dad_A Putative pilus assembly 40.1 67 0.0023 20.1 9.2 106 49-172 29-141 (146)
153 3kto_A Response regulator rece 39.9 66 0.0022 19.9 9.3 105 49-171 15-125 (136)
154 1v5e_A Pyruvate oxidase; oxido 39.4 80 0.0027 26.0 6.7 79 53-131 7-101 (590)
155 3snk_A Response regulator CHEY 39.3 67 0.0023 19.8 11.5 106 49-172 23-133 (135)
156 2khz_A C-MYC-responsive protei 39.2 10 0.00036 25.9 1.1 91 32-130 11-109 (165)
157 2l82_A Designed protein OR32; 39.1 66 0.0022 20.5 4.7 34 34-74 3-36 (162)
158 1o4v_A Phosphoribosylaminoimid 38.8 83 0.0028 22.0 5.6 36 32-72 13-48 (183)
159 3ew7_A LMO0794 protein; Q8Y8U8 38.4 49 0.0017 22.6 4.7 68 34-115 2-72 (221)
160 1ivn_A Thioesterase I; hydrola 37.5 82 0.0028 20.9 5.7 50 22-71 53-106 (190)
161 3uxy_A Short-chain dehydrogena 36.5 71 0.0024 23.1 5.4 33 32-72 28-60 (266)
162 3tjr_A Short chain dehydrogena 36.4 21 0.00072 26.5 2.5 35 31-73 30-64 (301)
163 3q2i_A Dehydrogenase; rossmann 36.3 59 0.002 24.6 5.2 106 33-153 15-132 (354)
164 3nkl_A UDP-D-quinovosamine 4-d 36.1 83 0.0028 19.9 5.4 44 20-69 54-97 (141)
165 2rd5_A Acetylglutamate kinase- 35.3 51 0.0017 24.6 4.5 47 24-73 28-77 (298)
166 1hdo_A Biliverdin IX beta redu 35.3 99 0.0034 20.6 6.7 69 33-115 4-78 (206)
167 3rqi_A Response regulator prot 35.1 98 0.0034 20.5 6.9 104 49-170 16-123 (184)
168 3dfz_A SIRC, precorrin-2 dehyd 34.3 54 0.0018 23.5 4.3 90 27-129 27-120 (223)
169 3mm4_A Histidine kinase homolo 34.0 1.1E+02 0.0038 20.8 6.7 47 123-172 150-196 (206)
170 3gem_A Short chain dehydrogena 33.9 46 0.0016 24.0 4.0 35 32-74 27-61 (260)
171 4hkt_A Inositol 2-dehydrogenas 33.8 1.4E+02 0.005 22.1 7.5 105 33-153 5-120 (331)
172 3oqb_A Oxidoreductase; structu 33.2 1.2E+02 0.0041 23.1 6.5 61 93-153 72-140 (383)
173 3h1g_A Chemotaxis protein CHEY 33.1 84 0.0029 19.2 9.7 48 124-173 81-128 (129)
174 2v5h_A Acetylglutamate kinase; 33.0 56 0.0019 24.8 4.5 47 24-73 41-90 (321)
175 2c5a_A GDP-mannose-3', 5'-epim 32.9 1.6E+02 0.0054 22.3 7.2 69 33-114 30-103 (379)
176 3kht_A Response regulator; PSI 32.9 90 0.0031 19.4 9.4 105 49-171 14-127 (144)
177 1agx_A Glutaminase-asparaginas 32.8 1.1E+02 0.0039 23.3 6.2 48 21-72 230-277 (331)
178 2qxy_A Response regulator; reg 32.8 89 0.003 19.3 9.6 106 49-172 13-121 (142)
179 3keo_A Redox-sensing transcrip 32.5 1.1E+02 0.0036 21.8 5.6 58 20-92 137-194 (212)
180 2rjn_A Response regulator rece 32.2 97 0.0033 19.6 8.9 105 49-171 16-125 (154)
181 3rkr_A Short chain oxidoreduct 32.0 49 0.0017 23.7 3.9 35 31-73 28-62 (262)
182 1p3y_1 MRSD protein; flavoprot 32.0 94 0.0032 21.7 5.2 130 32-172 9-186 (194)
183 3fhl_A Putative oxidoreductase 31.5 1.7E+02 0.0058 22.1 8.5 61 93-153 54-122 (362)
184 2d59_A Hypothetical protein PH 31.5 1.1E+02 0.0037 19.9 10.4 113 20-151 12-128 (144)
185 2iht_A Carboxyethylarginine sy 30.9 2.1E+02 0.0071 23.3 7.9 78 52-131 14-106 (573)
186 3hv2_A Response regulator/HD d 30.8 1E+02 0.0035 19.4 7.8 105 49-171 23-132 (153)
187 2lnd_A De novo designed protei 30.7 89 0.003 18.7 5.6 49 122-171 49-100 (112)
188 3r6d_A NAD-dependent epimerase 30.6 1.3E+02 0.0044 20.5 8.9 71 33-115 6-84 (221)
189 1o7j_A L-asparaginase; atomic 30.5 1.8E+02 0.0061 22.1 6.9 47 21-72 232-278 (327)
190 2j48_A Two-component sensor ki 30.3 81 0.0028 18.4 4.3 103 49-172 10-118 (119)
191 2nwq_A Probable short-chain de 30.1 78 0.0027 23.0 4.7 33 33-73 22-54 (272)
192 2wlt_A L-asparaginase; hydrola 30.0 1.8E+02 0.0063 22.1 6.9 47 21-72 233-279 (332)
193 4e4y_A Short chain dehydrogena 30.0 1.1E+02 0.0039 21.4 5.6 69 32-115 4-81 (244)
194 3uqz_A DNA processing protein 29.9 37 0.0013 25.6 2.9 48 114-166 231-280 (288)
195 1q6z_A BFD, BFDC, benzoylforma 29.7 97 0.0033 25.0 5.6 78 53-131 5-96 (528)
196 1wsa_A Asparaginase, asparagin 29.7 1.8E+02 0.0061 22.1 6.8 47 21-72 230-276 (330)
197 2g1u_A Hypothetical protein TM 29.6 1.2E+02 0.004 19.7 7.6 109 54-171 32-150 (155)
198 3hdv_A Response regulator; PSI 29.5 1E+02 0.0034 18.9 7.8 107 49-172 16-127 (136)
199 2r6j_A Eugenol synthase 1; phe 29.4 1.6E+02 0.0056 21.4 9.3 72 33-114 12-89 (318)
200 1nns_A L-asparaginase II; amid 29.4 1.8E+02 0.0061 22.1 6.8 47 21-72 226-272 (326)
201 3oh8_A Nucleoside-diphosphate 29.2 1.6E+02 0.0055 23.6 6.8 65 33-115 148-212 (516)
202 3evt_A Phosphoglycerate dehydr 29.2 98 0.0033 23.5 5.2 98 32-148 138-246 (324)
203 1ag9_A Flavodoxin; electron tr 29.1 97 0.0033 20.7 4.8 51 18-68 60-116 (175)
204 3tqi_A GMP synthase [glutamine 29.1 1.5E+02 0.0051 24.1 6.6 29 32-69 11-39 (527)
205 3nxk_A Cytoplasmic L-asparagin 29.1 1.9E+02 0.0066 22.1 7.2 49 19-72 233-282 (334)
206 4fn4_A Short chain dehydrogena 28.9 57 0.0019 23.8 3.8 75 32-114 7-94 (254)
207 3orf_A Dihydropteridine reduct 28.8 80 0.0027 22.4 4.6 35 32-74 22-56 (251)
208 1mb3_A Cell division response 28.7 97 0.0033 18.5 7.4 106 49-172 10-121 (124)
209 3ouz_A Biotin carboxylase; str 28.6 1.6E+02 0.0054 23.0 6.6 114 52-168 17-154 (446)
210 3h5i_A Response regulator/sens 28.3 94 0.0032 19.3 4.5 106 49-171 14-123 (140)
211 3h2s_A Putative NADH-flavin re 28.2 51 0.0018 22.6 3.4 69 34-115 2-73 (224)
212 3v8b_A Putative dehydrogenase, 28.2 78 0.0027 23.1 4.5 75 32-114 28-115 (283)
213 3maj_A DNA processing chain A; 28.2 87 0.003 24.6 4.8 60 103-167 237-302 (382)
214 4b4o_A Epimerase family protei 28.1 1.1E+02 0.0037 22.2 5.2 60 34-114 2-61 (298)
215 1t0i_A YLR011WP; FMN binding p 27.7 1.4E+02 0.0048 20.0 5.6 46 17-67 97-147 (191)
216 3eod_A Protein HNR; response r 27.4 1.1E+02 0.0037 18.6 7.9 106 49-172 16-126 (130)
217 3qrx_B Melittin; calcium-bindi 27.0 16 0.00054 16.5 0.2 17 113-129 1-17 (26)
218 3r0j_A Possible two component 27.0 1.6E+02 0.0056 20.5 7.1 105 49-171 32-140 (250)
219 3vps_A TUNA, NAD-dependent epi 27.0 1.6E+02 0.0056 21.2 6.1 35 32-74 7-41 (321)
220 1ozh_A ALS, acetolactate synth 26.9 1.3E+02 0.0043 24.6 5.9 29 103-131 72-106 (566)
221 3ged_A Short-chain dehydrogena 26.7 81 0.0028 22.9 4.3 73 33-115 3-86 (247)
222 2x4g_A Nucleoside-diphosphate- 26.6 1.9E+02 0.0064 21.2 6.5 69 33-115 14-88 (342)
223 2fcr_A Flavodoxin; electron tr 26.5 1.1E+02 0.0037 20.4 4.7 49 20-68 66-121 (173)
224 4e7p_A Response regulator; DNA 26.4 1.2E+02 0.0042 19.0 9.2 49 123-173 93-141 (150)
225 2ark_A Flavodoxin; FMN, struct 26.3 1.2E+02 0.004 20.5 4.9 48 17-67 65-122 (188)
226 3nhm_A Response regulator; pro 26.3 57 0.0019 20.0 3.0 46 124-172 77-122 (133)
227 1lss_A TRK system potassium up 26.2 65 0.0022 20.1 3.4 64 103-172 68-136 (140)
228 3h7a_A Short chain dehydrogena 26.0 85 0.0029 22.4 4.3 75 32-114 7-93 (252)
229 3c8m_A Homoserine dehydrogenas 25.9 84 0.0029 23.8 4.4 57 95-152 78-145 (331)
230 1s2d_A Purine trans deoxyribos 25.8 71 0.0024 21.8 3.6 95 32-131 7-116 (167)
231 3r1i_A Short-chain type dehydr 25.8 46 0.0016 24.3 2.8 34 32-73 32-65 (276)
232 3slg_A PBGP3 protein; structur 25.7 1.3E+02 0.0043 22.6 5.4 70 33-115 25-102 (372)
233 3ppi_A 3-hydroxyacyl-COA dehyd 25.7 48 0.0016 24.0 2.9 34 32-73 30-63 (281)
234 2yvq_A Carbamoyl-phosphate syn 25.6 1.4E+02 0.0049 19.4 5.2 32 32-70 25-56 (143)
235 3p19_A BFPVVD8, putative blue 25.5 91 0.0031 22.5 4.4 72 32-115 16-98 (266)
236 3o26_A Salutaridine reductase; 25.5 71 0.0024 23.2 3.8 75 32-115 12-102 (311)
237 1p9o_A Phosphopantothenoylcyst 25.5 89 0.003 23.7 4.4 57 21-77 23-92 (313)
238 3m6m_D Sensory/regulatory prot 25.4 1.3E+02 0.0044 18.8 8.1 106 49-172 23-136 (143)
239 3l9w_A Glutathione-regulated p 25.4 2.3E+02 0.008 22.1 7.0 118 33-166 6-134 (413)
240 4fgs_A Probable dehydrogenase 25.2 85 0.0029 23.2 4.2 34 32-73 29-62 (273)
241 1mvl_A PPC decarboxylase athal 25.0 1E+02 0.0034 21.9 4.3 48 124-171 132-198 (209)
242 3e48_A Putative nucleoside-dip 24.8 1.9E+02 0.0065 20.6 8.0 67 34-114 2-75 (289)
243 3f1l_A Uncharacterized oxidore 24.7 92 0.0031 22.1 4.2 34 32-73 12-45 (252)
244 3ioy_A Short-chain dehydrogena 24.6 1E+02 0.0035 23.0 4.6 34 32-73 8-41 (319)
245 3f6c_A Positive transcription 24.5 1.2E+02 0.0042 18.3 7.1 107 49-173 10-121 (134)
246 2a5l_A Trp repressor binding p 24.5 1.4E+02 0.0049 20.0 5.1 48 17-66 84-141 (200)
247 3f6r_A Flavodoxin; FMN binding 24.4 55 0.0019 21.1 2.8 48 18-67 66-119 (148)
248 2qx0_A 7,8-dihydro-6-hydroxyme 24.3 1.4E+02 0.0049 20.1 4.8 29 34-65 3-31 (159)
249 4gkb_A 3-oxoacyl-[acyl-carrier 24.3 1.1E+02 0.0037 22.3 4.5 75 32-114 7-93 (258)
250 3pp8_A Glyoxylate/hydroxypyruv 24.3 1.4E+02 0.0048 22.5 5.3 98 32-148 140-248 (315)
251 1czn_A Flavodoxin; FMN binding 24.2 1.1E+02 0.0039 20.0 4.4 50 18-68 61-117 (169)
252 3mxo_A Serine/threonine-protei 24.0 31 0.0011 23.8 1.5 22 106-127 138-159 (202)
253 3c1o_A Eugenol synthase; pheny 24.0 2.1E+02 0.0071 20.8 8.6 73 33-115 5-88 (321)
254 3f6p_A Transcriptional regulat 24.0 1.2E+02 0.0042 18.1 9.6 106 49-172 11-119 (120)
255 3m9w_A D-xylose-binding peripl 24.0 2E+02 0.007 20.6 6.3 68 48-130 16-89 (313)
256 1yio_A Response regulatory pro 23.9 1.7E+02 0.0057 19.6 6.5 104 49-170 13-120 (208)
257 3e9m_A Oxidoreductase, GFO/IDH 23.8 2.3E+02 0.0077 21.1 8.2 61 93-153 56-124 (330)
258 1yob_A Flavodoxin 2, flavodoxi 23.6 1.7E+02 0.0058 19.5 5.5 47 21-68 72-125 (179)
259 3edm_A Short chain dehydrogena 23.5 1.1E+02 0.0038 21.8 4.5 34 32-73 8-41 (259)
260 2bty_A Acetylglutamate kinase; 23.4 49 0.0017 24.4 2.6 48 23-73 12-62 (282)
261 3guy_A Short-chain dehydrogena 23.1 92 0.0031 21.6 3.9 33 33-73 2-34 (230)
262 2va1_A Uridylate kinase; UMPK, 23.0 2E+02 0.0067 20.8 5.8 42 32-73 24-71 (256)
263 3sc4_A Short chain dehydrogena 23.0 1.2E+02 0.0039 22.1 4.6 35 32-74 9-43 (285)
264 1nmo_A Hypothetical protein YB 23.0 1.3E+02 0.0046 21.7 4.8 56 116-171 82-151 (247)
265 4fc7_A Peroxisomal 2,4-dienoyl 23.0 1E+02 0.0035 22.2 4.3 34 32-73 27-60 (277)
266 3tzq_B Short-chain type dehydr 23.0 1.1E+02 0.0038 22.0 4.4 75 32-115 11-96 (271)
267 3ff4_A Uncharacterized protein 22.9 1.5E+02 0.0052 18.8 9.2 37 115-151 73-109 (122)
268 3rd5_A Mypaa.01249.C; ssgcid, 22.8 1E+02 0.0035 22.4 4.3 75 32-115 16-97 (291)
269 1dhr_A Dihydropteridine reduct 22.7 1.2E+02 0.0043 21.1 4.6 34 32-73 7-40 (241)
270 3l6e_A Oxidoreductase, short-c 22.7 1.1E+02 0.0037 21.5 4.3 33 33-73 4-36 (235)
271 2b69_A UDP-glucuronate decarbo 22.5 2.3E+02 0.008 20.8 8.2 73 32-115 27-102 (343)
272 3q2o_A Phosphoribosylaminoimid 22.5 2.6E+02 0.0088 21.3 9.6 110 53-168 26-145 (389)
273 1f9y_A HPPK, protein (6-hydrox 22.5 1.2E+02 0.004 20.6 4.1 28 34-64 2-29 (158)
274 3hdg_A Uncharacterized protein 22.4 1.4E+02 0.0048 18.2 7.3 105 49-171 16-124 (137)
275 3hg7_A D-isomer specific 2-hyd 22.3 1.5E+02 0.005 22.5 5.1 98 32-148 141-249 (324)
276 2jba_A Phosphate regulon trans 22.3 1.3E+02 0.0046 17.9 7.0 106 49-172 11-122 (127)
277 2hmt_A YUAA protein; RCK, KTN, 22.2 1.5E+02 0.0051 18.3 8.9 109 54-166 19-136 (144)
278 3lte_A Response regulator; str 22.1 1.4E+02 0.0047 18.0 8.1 105 49-172 15-125 (132)
279 3e03_A Short chain dehydrogena 22.1 1.2E+02 0.0041 21.8 4.5 35 32-74 6-40 (274)
280 2ap9_A NAG kinase, acetylgluta 22.1 54 0.0019 24.4 2.6 47 24-73 17-66 (299)
281 3l6u_A ABC-type sugar transpor 22.1 1.4E+02 0.0048 21.2 4.9 82 32-130 8-95 (293)
282 2gwr_A DNA-binding response re 22.1 2E+02 0.0068 19.8 7.1 106 49-172 14-122 (238)
283 3gpi_A NAD-dependent epimerase 22.0 2.2E+02 0.0075 20.2 6.5 65 33-114 4-73 (286)
284 3m2p_A UDP-N-acetylglucosamine 21.8 2.3E+02 0.0079 20.4 9.2 66 33-114 3-72 (311)
285 3moi_A Probable dehydrogenase; 21.8 2.3E+02 0.0077 21.7 6.2 61 93-153 53-121 (387)
286 2c31_A Oxalyl-COA decarboxylas 21.8 1.1E+02 0.0037 25.0 4.5 29 103-131 71-105 (568)
287 3ucx_A Short chain dehydrogena 21.8 1.3E+02 0.0044 21.5 4.6 34 32-73 11-44 (264)
288 3v2h_A D-beta-hydroxybutyrate 21.8 1.1E+02 0.0037 22.3 4.2 33 32-72 25-57 (281)
289 1o5i_A 3-oxoacyl-(acyl carrier 21.7 1.3E+02 0.0045 21.2 4.6 70 32-114 19-91 (249)
290 3nyw_A Putative oxidoreductase 21.7 86 0.0029 22.3 3.6 34 32-73 7-40 (250)
291 3tfo_A Putative 3-oxoacyl-(acy 21.7 93 0.0032 22.5 3.8 33 33-73 5-37 (264)
292 3sju_A Keto reductase; short-c 21.4 1.1E+02 0.0037 22.2 4.1 34 32-73 24-57 (279)
293 2a1f_A Uridylate kinase; PYRH, 21.4 2.1E+02 0.0073 20.4 5.7 42 32-73 8-56 (247)
294 3lf2_A Short chain oxidoreduct 21.3 1.2E+02 0.004 21.7 4.3 34 32-73 8-41 (265)
295 3don_A Shikimate dehydrogenase 21.3 90 0.0031 23.1 3.6 67 32-115 118-186 (277)
296 3l77_A Short-chain alcohol deh 21.3 1.2E+02 0.0042 21.0 4.3 33 33-73 3-35 (235)
297 3ek6_A Uridylate kinase; UMPK 21.3 1.9E+02 0.0065 20.7 5.3 42 32-73 9-57 (243)
298 3i1j_A Oxidoreductase, short c 21.1 98 0.0034 21.7 3.8 34 32-73 14-47 (247)
299 1wls_A L-asparaginase; structu 21.1 1.5E+02 0.005 22.6 4.9 48 22-72 215-262 (328)
300 4e3z_A Putative oxidoreductase 21.0 96 0.0033 22.2 3.7 34 32-73 26-59 (272)
301 1vl8_A Gluconate 5-dehydrogena 21.0 1.2E+02 0.004 21.8 4.2 34 32-73 21-54 (267)
302 3n0r_A Response regulator; sig 21.0 24 0.00081 26.2 0.4 106 48-171 168-276 (286)
303 3ll5_A Gamma-glutamyl kinase r 20.9 90 0.0031 22.5 3.5 40 33-73 4-49 (249)
304 3ehe_A UDP-glucose 4-epimerase 20.9 2.4E+02 0.0082 20.3 7.1 67 33-114 2-73 (313)
305 3gdo_A Uncharacterized oxidore 20.9 2.7E+02 0.0093 20.9 7.4 107 33-153 7-122 (358)
306 1fjh_A 3alpha-hydroxysteroid d 20.9 1.2E+02 0.0043 21.2 4.3 33 33-73 2-34 (257)
307 4dqx_A Probable oxidoreductase 20.9 1.2E+02 0.0041 22.0 4.2 75 32-115 27-112 (277)
308 4imr_A 3-oxoacyl-(acyl-carrier 20.8 1E+02 0.0036 22.3 3.9 75 32-114 33-119 (275)
309 3ek2_A Enoyl-(acyl-carrier-pro 20.7 1.2E+02 0.0042 21.4 4.3 34 32-73 14-49 (271)
310 3ijr_A Oxidoreductase, short c 20.7 1.3E+02 0.0044 22.0 4.4 34 32-73 47-80 (291)
311 3ezl_A Acetoacetyl-COA reducta 20.6 84 0.0029 22.2 3.3 33 32-72 13-45 (256)
312 3ezy_A Dehydrogenase; structur 20.5 2.7E+02 0.0092 20.7 7.2 61 93-153 53-121 (344)
313 3e18_A Oxidoreductase; dehydro 20.5 2.8E+02 0.0095 20.9 6.7 106 33-153 7-122 (359)
314 1ulz_A Pyruvate carboxylase N- 20.5 2.1E+02 0.0071 22.3 5.8 97 53-150 14-129 (451)
315 3dii_A Short-chain dehydrogena 20.4 1.3E+02 0.0044 21.2 4.3 33 33-73 3-35 (247)
316 2oqr_A Sensory transduction pr 20.4 2.1E+02 0.0072 19.4 7.4 106 49-172 13-121 (230)
317 2h31_A Multifunctional protein 20.3 2E+02 0.0067 22.9 5.5 83 32-133 265-353 (425)
318 3ip0_A 2-amino-4-hydroxy-6-hyd 20.3 1.4E+02 0.0047 20.2 4.1 29 34-65 2-30 (158)
319 4fs3_A Enoyl-[acyl-carrier-pro 20.3 1.3E+02 0.0046 21.4 4.4 36 32-73 6-41 (256)
320 3zv4_A CIS-2,3-dihydrobiphenyl 20.3 1.3E+02 0.0043 21.8 4.3 74 32-114 5-89 (281)
321 4eso_A Putative oxidoreductase 20.3 1.3E+02 0.0044 21.4 4.3 34 32-73 8-41 (255)
322 1cbk_A Protein (7,8-dihydro-6- 20.3 1.4E+02 0.0048 20.2 4.1 29 34-65 3-31 (160)
323 4egb_A DTDP-glucose 4,6-dehydr 20.1 2.6E+02 0.009 20.4 7.8 76 32-115 24-109 (346)
324 4iiu_A 3-oxoacyl-[acyl-carrier 20.0 1.1E+02 0.0039 21.8 3.9 76 32-115 26-115 (267)
No 1
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.98 E-value=1.5e-31 Score=219.37 Aligned_cols=162 Identities=24% Similarity=0.338 Sum_probs=135.4
Q ss_pred CccccCCccccC--------ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-
Q psy16939 7 RAVKLCSMCFID--------GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND- 76 (174)
Q Consensus 7 ~~~~~~g~~~~~--------~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~- 76 (174)
..+..+||+... .++++.+|++..+ +++|||++||... .+.+.+.+++++|+..+++|||+++....
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccC---CCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 357778887542 3457899999876 8999999999975 57889999999999999999999976421
Q ss_pred -----------ccccccCCCCCE--------EEe-ecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchH
Q psy16939 77 -----------PVLNAKTLPDNV--------FIQ-KWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ 136 (174)
Q Consensus 77 -----------~~~~~~~~~~nv--------~~~-~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ 136 (174)
..+.. .+|+|+ .++ +|+||.++|.|+++++||||||+||++|++++|||+|++|+++||
T Consensus 311 ~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 311 ANSSYFDSHSQTDPLT-FLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp TTTTTTCC--CSCGGG-GSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred ccccccccccccchhh-hcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 11111 356664 444 599999999998889999999999999999999999999999999
Q ss_pred HHHHHHH-HHcCceeEecCC---CCCHHHHHHHHHHhhcC
Q psy16939 137 YRNMVLL-RHRGYALIEPIQ---TLTKQSFLKNAQTMLND 172 (174)
Q Consensus 137 ~~na~~l-~~~G~g~~l~~~---~~~~~~l~~al~~ll~~ 172 (174)
+.||+++ +++|+|+.+... .++.++|.++|+++|++
T Consensus 390 ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 390 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcC
Confidence 9999997 689999999765 68999999999999974
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.97 E-value=1.1e-31 Score=218.97 Aligned_cols=162 Identities=23% Similarity=0.349 Sum_probs=138.1
Q ss_pred ccccCCccccC-----Ch--HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---C
Q psy16939 8 AVKLCSMCFID-----GL--SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---D 76 (174)
Q Consensus 8 ~~~~~g~~~~~-----~~--~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---~ 76 (174)
.+..+||+... .+ .++.+|++..+ +++|||++||... .+.+.+.+++++++..+++|+|+++... +
T Consensus 239 ~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l 315 (456)
T 2c1x_A 239 TYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHL 315 (456)
T ss_dssp CEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGS
T ss_pred CEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCcccc---CCHHHHHHHHHHHHhcCCeEEEEECCcchhhC
Confidence 56677877532 12 34789999876 8999999999986 4678899999999999999999998653 2
Q ss_pred cc-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc-CceeEecC
Q psy16939 77 PV-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR-GYALIEPI 154 (174)
Q Consensus 77 ~~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~-G~g~~l~~ 154 (174)
++ +.+ ..++|+++.+|+||.++|.|+++|+||||||+||++|++++|+|+|++|+++||+.||+++++. |+|+.++.
T Consensus 316 ~~~~~~-~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~ 394 (456)
T 2c1x_A 316 PEGFLE-KTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG 394 (456)
T ss_dssp CTTHHH-HHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG
T ss_pred CHHHHh-hcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC
Confidence 21 111 2357899999999999999999999999999999999999999999999999999999999998 99999987
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
.+++.++|.++++++|+|+
T Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 395 GVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp GSCCHHHHHHHHHHHHHSH
T ss_pred CCcCHHHHHHHHHHHHCCC
Confidence 7889999999999999874
No 3
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.97 E-value=9.3e-32 Score=218.89 Aligned_cols=162 Identities=26% Similarity=0.376 Sum_probs=139.6
Q ss_pred ccccCCcccc-------CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---C
Q psy16939 8 AVKLCSMCFI-------DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---D 76 (174)
Q Consensus 8 ~~~~~g~~~~-------~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---~ 76 (174)
.+..+||... ..++++.+|++..+ +++|||++||... ++.+.+.+++++|+..+++|||++++.. +
T Consensus 241 ~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~---~~~~~~~el~~~l~~~~~~flw~~~~~~~~~l 317 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVT---PPPHELTALAESLEECGFPFIWSFRGDPKEKL 317 (454)
T ss_dssp CEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHCCCEEEECCSCHHHHS
T ss_pred CEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCc---CCHHHHHHHHHHHHhCCCeEEEEeCCcchhcC
Confidence 5566777542 11457999999876 8999999999986 5788899999999999999999998743 2
Q ss_pred cc-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecC
Q psy16939 77 PV-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPI 154 (174)
Q Consensus 77 ~~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~ 154 (174)
++ +.+ ..++|+++.+|+||.++|.|+++++||||||+||+.|++++|+|+|++|+++||+.||+++++ .|+|+.++.
T Consensus 318 p~~~~~-~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 318 PKGFLE-RTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp CTTHHH-HTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CHhHHh-hcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 22 222 346799999999999999998888999999999999999999999999999999999999999 599999988
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
..++.++|.++++++|+++
T Consensus 397 ~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 397 GVLTKESIKKALELTMSSE 415 (454)
T ss_dssp GSCCHHHHHHHHHHHHSSH
T ss_pred CCCCHHHHHHHHHHHHCCC
Confidence 7899999999999999764
No 4
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=185.80 Aligned_cols=149 Identities=32% Similarity=0.587 Sum_probs=134.4
Q ss_pred CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCc
Q psy16939 18 DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 18 ~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 96 (174)
++|+++.+|++..+ +++|||++||... ..+.+.+..+++++++.+++++|.+++.... ..++|+.+.+|+|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-----~~~~~v~~~~~~~~ 78 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPD-----TLGLNTRLYKWIPQ 78 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCT-----TCCTTEEEESSCCH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCcc-----cCCCcEEEecCCCH
Confidence 57899999998765 7899999999964 2478889999999998889999998865443 56789999999999
Q ss_pred hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 97 TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 97 ~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+++.|++||++|||||++|++|++++|+|+|++|...||..||.++++.|+|+.++.++++.++|.++++++++|+
T Consensus 79 ~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 99998889999999999999999999999999999999999999999999999999888889999999999999774
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.97 E-value=1.9e-30 Score=212.00 Aligned_cols=163 Identities=19% Similarity=0.284 Sum_probs=137.5
Q ss_pred CccccCCccccCC-----------hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 7 RAVKLCSMCFIDG-----------LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 7 ~~~~~~g~~~~~~-----------~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
..+..+||+.... +.++.+|++..+ +++|||++||... .++.+.+.+++++|+..+++|||+++..
T Consensus 239 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 239 PPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp CCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred CcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccc--cCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4577788876421 247889999876 8999999999982 1578889999999999999999999864
Q ss_pred --CCcc-ccccCC--CCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHH-HHcCc
Q psy16939 75 --NDPV-LNAKTL--PDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL-RHRGY 148 (174)
Q Consensus 75 --~~~~-~~~~~~--~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l-~~~G~ 148 (174)
.+++ +.+ .. ++|+++.+|+||.++|.|+++++||||||+||++|++++|+|+|++|+++||+.||+++ +++|+
T Consensus 317 ~~~l~~~~~~-~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~ 395 (463)
T 2acv_A 317 KKVFPEGFLE-WMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 395 (463)
T ss_dssp GGGSCTTHHH-HHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred cccCChhHHH-hhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCe
Confidence 2322 211 22 57899999999999999999999999999999999999999999999999999999995 89999
Q ss_pred eeEe-c---CC--CCCHHHHHHHHHHhhcC
Q psy16939 149 ALIE-P---IQ--TLTKQSFLKNAQTMLND 172 (174)
Q Consensus 149 g~~l-~---~~--~~~~~~l~~al~~ll~~ 172 (174)
|+.+ + .+ .++.++|.++|+++|++
T Consensus 396 g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~ 425 (463)
T 2acv_A 396 GLGLRVDYRKGSDVVAAEEIEKGLKDLMDK 425 (463)
T ss_dssp EEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred EEEEecccCCCCccccHHHHHHHHHHHHhc
Confidence 9999 3 34 68999999999999963
No 6
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.97 E-value=6e-31 Score=215.88 Aligned_cols=147 Identities=24% Similarity=0.422 Sum_probs=129.5
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-------Ccc-ccccCCCCCEEEee
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-------DPV-LNAKTLPDNVFIQK 92 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-------~~~-~~~~~~~~nv~~~~ 92 (174)
++.+|++..+ +++|||++||... .+.+.+.+++++|+..+++|+|+++... +++ +.+ ..++|+++.+
T Consensus 284 ~~~~wld~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v~~ 359 (482)
T 2pq6_A 284 ECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLIAS 359 (482)
T ss_dssp HHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEEES
T ss_pred HHHHHHhcCCCCceEEEecCCccc---CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHH-hcCCCEEEEe
Confidence 4789999876 8999999999875 5677799999999999999999987532 221 211 2467999999
Q ss_pred cCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHH-HcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLR-HRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~-~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||++++ ++|+|+.++ ++++.++|.++|+++|+
T Consensus 360 ~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 360 WCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIA 438 (482)
T ss_dssp CCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHT
T ss_pred ecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999997 699999997 67899999999999998
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 439 ~~ 440 (482)
T 2pq6_A 439 GD 440 (482)
T ss_dssp SH
T ss_pred CC
Confidence 75
No 7
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.96 E-value=1.6e-27 Score=191.35 Aligned_cols=155 Identities=16% Similarity=0.119 Sum_probs=135.5
Q ss_pred CccccCCcccc----CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcccccc
Q psy16939 7 RAVKLCSMCFI----DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAK 82 (174)
Q Consensus 7 ~~~~~~g~~~~----~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~ 82 (174)
.++.++|++.. .+++++.+|++.. +++|||++||... +.+.+..+++++++.+.+++|..+.......
T Consensus 193 ~~~~~~G~~~~~~~~~~~~~l~~~l~~~-~~~Vlv~~Gs~~~----~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~--- 264 (404)
T 3h4t_A 193 LGTVQTGAWILPDQRPLSAELEGFLRAG-SPPVYVGFGSGPA----PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI--- 264 (404)
T ss_dssp CSCCBCCCCCCCCCCCCCHHHHHHHHTS-SCCEEECCTTSCC----CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS---
T ss_pred CCeEEeCccccCCCCCCCHHHHHHHhcC-CCeEEEECCCCCC----cHHHHHHHHHHHHhCCCEEEEEeCCcccccc---
Confidence 35667776643 4678899998754 5899999999974 5667999999999999999999886544321
Q ss_pred CCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
..++|+++.+|+|+.++| +.+|++|||||+||+.|++++|+|+|++|..+||+.||.++++.|+|+.+..++++.++|
T Consensus 265 ~~~~~v~~~~~~~~~~ll--~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 342 (404)
T 3h4t_A 265 DEGDDCLVVGEVNHQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESL 342 (404)
T ss_dssp SCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHH
T ss_pred cCCCCEEEecCCCHHHHH--hhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHH
Confidence 457899999999999999 789999999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHhhc
Q psy16939 163 LKNAQTMLN 171 (174)
Q Consensus 163 ~~al~~ll~ 171 (174)
.++++++++
T Consensus 343 ~~ai~~ll~ 351 (404)
T 3h4t_A 343 SAALATALT 351 (404)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhC
Confidence 999999986
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.95 E-value=8.2e-28 Score=193.40 Aligned_cols=157 Identities=17% Similarity=0.099 Sum_probs=135.0
Q ss_pred ccccCCccccC----ChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 8 AVKLCSMCFID----GLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 8 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
.+.++||+..+ .++++.+|++..+ ++|||++||... ....+.+.+++++++..+.+++|+++...... ..
T Consensus 210 ~~~~vG~~~~~~~~~~~~~~~~~l~~~~-~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~---~~ 283 (416)
T 1rrv_A 210 DAVQTGAWLLSDERPLPPELEAFLAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVL---PD 283 (416)
T ss_dssp CCEECCCCCCCCCCCCCHHHHHHHHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCC---SC
T ss_pred CeeeECCCccCccCCCCHHHHHHHhcCC-CeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccc---cC
Confidence 45677877653 5678999997664 899999999853 12567889999999999999999988654321 15
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| ++||++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.++.++.+.++|.
T Consensus 284 ~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 361 (416)
T 1rrv_A 284 DRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLS 361 (416)
T ss_dssp CCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHH
T ss_pred CCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHH
Confidence 67899999999999999 8899999999999999999999999999999999999999999999999987788999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++ +|+
T Consensus 362 ~~i~~l-~~~ 370 (416)
T 1rrv_A 362 AALTTV-LAP 370 (416)
T ss_dssp HHHHHH-TSH
T ss_pred HHHHHh-hCH
Confidence 999998 664
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.95 E-value=1.7e-27 Score=191.59 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=132.0
Q ss_pred ccccCCcccc----CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 8 AVKLCSMCFI----DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 8 ~~~~~g~~~~----~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
.+.++||+.. +.++++.+|++..+ ++|||++||.. .+.+.++.++++++..+.+++|+++...... ..
T Consensus 211 ~~~~vG~~~~~~~~~~~~~~~~~l~~~~-~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~---~~ 282 (415)
T 1iir_A 211 DAVQTGAWILPDERPLSPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVL---PD 282 (415)
T ss_dssp CCEECCCCCCCCCCCCCHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCC---SS
T ss_pred CeEeeCCCccCcccCCCHHHHHHHhhCC-CeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccc---cC
Confidence 4667787765 35678999997654 89999999985 2688899999999999999999887644321 14
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| ++||++|||||+||++|++++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.
T Consensus 283 ~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 283 DGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp CGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred CCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 67899999999999998 8899999999999999999999999999999999999999999999999987788999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++ +|+
T Consensus 361 ~~i~~l-~~~ 369 (415)
T 1iir_A 361 AALATA-LTP 369 (415)
T ss_dssp HHHHHH-TSH
T ss_pred HHHHHH-cCH
Confidence 999998 663
No 10
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.95 E-value=5.2e-27 Score=188.93 Aligned_cols=162 Identities=23% Similarity=0.322 Sum_probs=133.8
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..+.++||+.... .+..+|+...+ +++|||++||... ...+.+.+++++++..+.+++|.++.....+... .
T Consensus 228 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~-~ 302 (424)
T 2iya_A 228 VGDNYTFVGPTYGDR-SHQGTWEGPGDGRPVLLIALGSAFT---DHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLG-E 302 (424)
T ss_dssp CCTTEEECCCCCCCC-GGGCCCCCCCSSCCEEEEECCSSSC---CCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGC-S
T ss_pred CCCCEEEeCCCCCCc-ccCCCCCccCCCCCEEEEEcCCCCc---chHHHHHHHHHHHhcCCcEEEEEECCcCChHHhc-c
Confidence 455677888875432 22345665444 7999999999974 4678899999999888889999887643221111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| +.+|++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+..++++.++|.
T Consensus 303 ~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 303 VPPNVEVHQWVPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp CCTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred CCCCeEEecCCCHHHHH--hhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 67899999999999999 6699999999999999999999999999999999999999999999999987778999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++++|+
T Consensus 381 ~~i~~ll~~~ 390 (424)
T 2iya_A 381 EAVLAVASDP 390 (424)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHcCH
Confidence 9999999874
No 11
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.94 E-value=1e-26 Score=185.30 Aligned_cols=144 Identities=20% Similarity=0.264 Sum_probs=114.9
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....+|++..+ +++|||++||..... ...+.+.++++++++.+.+++|..++...... ...++|+++.+|+||.++
T Consensus 225 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~--~~~~~~v~~~~~~p~~~l 301 (400)
T 4amg_A 225 AVLPDWLPPAAGRRRIAVTLGSIDALS-GGIAKLAPLFSEVADVDAEFVLTLGGGDLALL--GELPANVRVVEWIPLGAL 301 (400)
T ss_dssp EECCTTCSCCTTCCEEEECCCSCC--C-CSSSTTHHHHHHGGGSSSEEEEECCTTCCCCC--CCCCTTEEEECCCCHHHH
T ss_pred ccCcccccccCCCcEEEEeCCcccccC-ccHHHHHHHHHHhhccCceEEEEecCcccccc--ccCCCCEEEEeecCHHHH
Confidence 34456777666 899999999986532 12356788899999999999999877543321 157899999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
| +.+|+||||||+||++|++++|+|+|++|.++||+.||+++++.|+|+.++..+.+.+. |+++|+|+
T Consensus 302 L--~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~a----l~~lL~d~ 369 (400)
T 4amg_A 302 L--ETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAEQ----CRRLLDDA 369 (400)
T ss_dssp H--TTCSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHHH----HHHHHHCH
T ss_pred h--hhhhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHHH----HHHHHcCH
Confidence 9 66999999999999999999999999999999999999999999999999887777654 55566553
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.93 E-value=1.2e-25 Score=180.22 Aligned_cols=162 Identities=22% Similarity=0.314 Sum_probs=134.2
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..+.++||+.... .+..+|....+ +++|||++||... ...+.+..+++++++.+.+++|.++.....+..+ .
T Consensus 220 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~-~ 294 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDR-RFLGEWTRPADDLPVVLVSLGTTFN---DRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALG-D 294 (415)
T ss_dssp CCTTEEECCCCCCCC-GGGCCCCCCSSCCCEEEEECTTTSC---CCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGC-C
T ss_pred CCCceEEeCCCCCCc-ccCcCccccCCCCCEEEEECCCCCC---ChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhc-C
Confidence 455677888876542 23344544334 7999999999865 3567899999999998989999888642221111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+++.+|+|+.++| +.||++|||||++|++|++++|+|+|++|...||..||.++++.|+|+.+..++++.++|.
T Consensus 295 ~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~ 372 (415)
T 3rsc_A 295 LPPNVEAHRWVPHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLL 372 (415)
T ss_dssp CCTTEEEESCCCHHHHH--HHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHH
T ss_pred CCCcEEEEecCCHHHHH--hhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHH
Confidence 67899999999999999 6699999999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++++|+
T Consensus 373 ~~i~~ll~~~ 382 (415)
T 3rsc_A 373 AAVGAVAADP 382 (415)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHHcCH
Confidence 9999999875
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.93 E-value=3.7e-26 Score=185.09 Aligned_cols=150 Identities=20% Similarity=0.244 Sum_probs=121.1
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
+.++.+|++..+ +++|||++||.........+.+..++++++..+++++|..++....++. ..++|+++.+|+|+.+
T Consensus 254 ~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~--~~~~~v~~~~~~~~~~ 331 (441)
T 2yjn_A 254 PSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA--NIPDNVRTVGFVPMHA 331 (441)
T ss_dssp SCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS--SCCSSEEECCSCCHHH
T ss_pred CcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhc--cCCCCEEEecCCCHHH
Confidence 345677887544 7899999999875200023457778888888889999988865443221 3578999999999999
Q ss_pred hhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 99 ILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+| ++||++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+..++++.++|.++|+++++|+
T Consensus 332 ll--~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 404 (441)
T 2yjn_A 332 LL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP 404 (441)
T ss_dssp HG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH
Confidence 88 88999999999999999999999999999999999999999999999999888889999999999999874
No 14
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.92 E-value=1.1e-24 Score=173.33 Aligned_cols=162 Identities=18% Similarity=0.250 Sum_probs=132.4
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..++++||+.... .+...|....+ +++|++++||... ...+.+..++++++..+.++++.+++....+... .
T Consensus 204 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~ 278 (402)
T 3ia7_A 204 FDERFAFVGPTLTGR-DGQPGWQPPRPDAPVLLVSLGNQFN---EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLG-P 278 (402)
T ss_dssp CCTTEEECCCCCCC-----CCCCCSSTTCCEEEEECCSCSS---CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGC-S
T ss_pred CCCCeEEeCCCCCCc-ccCCCCcccCCCCCEEEEECCCCCc---chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhC-C
Confidence 455677888776432 23344544334 7999999999976 3567899999999988889999887643222111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
.++|+++.+|+|+.++| +.||++|||||++|++|++++|+|+|++|. ..||..||.++++.|+|+.+..++++.++|
T Consensus 279 ~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 279 LPPNVEAHQWIPFHSVL--AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp CCTTEEEESCCCHHHHH--TTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHH
T ss_pred CCCcEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHH
Confidence 67899999999999999 679999999999999999999999999999 999999999999999999998878899999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.++++++++|+
T Consensus 357 ~~~~~~ll~~~ 367 (402)
T 3ia7_A 357 REAVERLAADS 367 (402)
T ss_dssp HHHHHHHHHCH
T ss_pred HHHHHHHHcCH
Confidence 99999999875
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.92 E-value=4.2e-25 Score=175.47 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=123.7
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCC--CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKL--SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT 97 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~--~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 97 (174)
.++.+|++..+ +++|||++||......+ +.+.+..+++++++.+.+++|..++....++. ..++|+.+ +|+|+.
T Consensus 198 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~--~~~~~v~~-~~~~~~ 274 (384)
T 2p6p_A 198 CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALR--AEVPQARV-GWTPLD 274 (384)
T ss_dssp CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHH--HHCTTSEE-ECCCHH
T ss_pred CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhC--CCCCceEE-cCCCHH
Confidence 45667887644 68999999998752001 33568889999998889999988753222111 24689999 999999
Q ss_pred hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 98 DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++| +.||++|||||++|++||+++|+|+|++|..+||..||.++++.|+|+.+..++.+.++|.++++++++|+
T Consensus 275 ~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 348 (384)
T 2p6p_A 275 VVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD 348 (384)
T ss_dssp HHG--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH
T ss_pred HHH--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH
Confidence 999 78999999999999999999999999999999999999999999999999877789999999999999874
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.90 E-value=3.3e-24 Score=171.14 Aligned_cols=150 Identities=18% Similarity=0.304 Sum_probs=111.4
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCC-----CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKL-----SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW 93 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~-----~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~ 93 (174)
+.++.+|+...+ +++|||++|+....... ..+.+..+++++++.+.+++|..++.....+. ..++|+++.+|
T Consensus 214 ~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~--~~~~~v~~~~~ 291 (398)
T 4fzr_A 214 NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ--PLPEGVLAAGQ 291 (398)
T ss_dssp SCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC----------CCTTEEEESC
T ss_pred CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhc--cCCCcEEEeCc
Confidence 345667777654 79999999999642110 23458889999998899999988765432211 46889999999
Q ss_pred CCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 94 ~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+.++| +.||++|||||++|++||+++|+|+|++|...||..|+.++++.|+|+.+..++++.++|.++++++++|+
T Consensus 292 ~~~~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 369 (398)
T 4fzr_A 292 FPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDS 369 (398)
T ss_dssp CCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCT
T ss_pred CCHHHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 9999999 66999999999999999999999999999999999999999999999999888888999999999999876
No 17
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.90 E-value=4e-23 Score=166.27 Aligned_cols=158 Identities=25% Similarity=0.351 Sum_probs=123.3
Q ss_pred cccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCC
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPD 86 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~ 86 (174)
+.++||+.... .+..+|....+ +++||+++||... ...+.+.+++++++.. +.+++|.++.....+..+ ..++
T Consensus 209 v~~vG~~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~-~~~~ 283 (430)
T 2iyf_A 209 YTFVGACQGDR-AEEGGWQRPAGAEKVVLVSLGSAFT---KQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELG-ELPD 283 (430)
T ss_dssp EEECCCCC------CCCCCCCTTCSEEEEEECTTTCC----CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGC-SCCT
T ss_pred EEEeCCcCCCC-CCCCCCccccCCCCeEEEEcCCCCC---CcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhc-cCCC
Confidence 66677643211 11123443333 6899999999973 4678899999999886 778888887543221111 4578
Q ss_pred CEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy16939 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNA 166 (174)
Q Consensus 87 nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al 166 (174)
|+.+.+|+|+.++| +.+|++|+|||++|+.||+++|+|+|++|..+||..|++++++.|+|+.+..++++.++|.+++
T Consensus 284 ~v~~~~~~~~~~~l--~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i 361 (430)
T 2iyf_A 284 NVEVHDWVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETA 361 (430)
T ss_dssp TEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHH
T ss_pred CeEEEecCCHHHHh--hccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHH
Confidence 99999999999988 6799999999999999999999999999999999999999999999999987778999999999
Q ss_pred HHhhcCC
Q psy16939 167 QTMLNDP 173 (174)
Q Consensus 167 ~~ll~~~ 173 (174)
+++++|+
T Consensus 362 ~~ll~~~ 368 (430)
T 2iyf_A 362 LALVDDP 368 (430)
T ss_dssp HHHHHCH
T ss_pred HHHHcCH
Confidence 9999774
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.88 E-value=1.3e-22 Score=161.27 Aligned_cols=147 Identities=22% Similarity=0.277 Sum_probs=122.3
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....|+...+ +++|++++||.......+.+.+..++++ ++. +.+++|..++.....+ . ..++|+++.+|+|+.++
T Consensus 207 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l-~-~~~~~v~~~~~~~~~~l 283 (391)
T 3tsa_A 207 AFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALL-T-DLPDNARIAESVPLNLF 283 (391)
T ss_dssp ECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGC-T-TCCTTEEECCSCCGGGT
T ss_pred CCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhc-c-cCCCCEEEeccCCHHHH
Confidence 3445665544 7899999999843111237778888988 888 6789998876432221 1 46789999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecC--CCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI--QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~--~~~~~~~l~~al~~ll~~~ 173 (174)
+ +.||++|||||.+|++||+++|+|+|++|...||..|+.++++.|+|+.+.. ++.+.+.|.++++++++|+
T Consensus 284 l--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~ 357 (391)
T 3tsa_A 284 L--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDT 357 (391)
T ss_dssp G--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCT
T ss_pred H--hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCH
Confidence 9 8899999999999999999999999999999999999999999999999987 6678999999999999886
No 19
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.87 E-value=8.3e-23 Score=163.14 Aligned_cols=138 Identities=20% Similarity=0.273 Sum_probs=114.3
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....+|+...+ +++||+++||..... ...+.+.++++++++.+.+++|..++.....+ + ..++|+.+.+|+|+.++
T Consensus 220 ~~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l-~-~~~~~v~~~~~~~~~~l 296 (398)
T 3oti_A 220 AVLGDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGDLDISPL-G-TLPRNVRAVGWTPLHTL 296 (398)
T ss_dssp EECCSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGG-C-SCCTTEEEESSCCHHHH
T ss_pred cCCchhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECCcChhhh-c-cCCCcEEEEccCCHHHH
Confidence 34445655444 789999999995310 13456888999999888999999887653322 1 46889999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHH--HHHHHcCceeEecCCCCCHHHHH
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM--VLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na--~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
| +.||++|||||++|++||+++|+|+|++|...||..|+ .++++.|+|+.++.++.+.+.|.
T Consensus 297 l--~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 297 L--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR 360 (398)
T ss_dssp H--TTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH
T ss_pred H--hhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH
Confidence 9 66999999999999999999999999999999999999 99999999999987777877776
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.86 E-value=5.5e-21 Score=152.68 Aligned_cols=136 Identities=23% Similarity=0.377 Sum_probs=119.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+++|++++|+... ...+.+.++++++.+.+.+++|..++....+..+ ..++|+.+.+|+|..++| +.||++|+|
T Consensus 242 ~~~vlv~~G~~~~---~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~-~~~~~v~~~~~~~~~~~l--~~ad~~v~~ 315 (412)
T 3otg_A 242 RPLVYLTLGTSSG---GTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLG-EVPANVRLESWVPQAALL--PHVDLVVHH 315 (412)
T ss_dssp SCEEEEECTTTTC---SCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCC-CCCTTEEEESCCCHHHHG--GGCSEEEES
T ss_pred CCEEEEEcCCCCc---CcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhc-cCCCcEEEeCCCCHHHHH--hcCcEEEEC
Confidence 7899999999963 4688899999999988889999888754222111 467899999999988999 679999999
Q ss_pred CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 112 GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 112 gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|++||+++|+|+|++|...||..|+..+++.|.|..+..++.+.++|.+++.++++|+
T Consensus 316 ~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 377 (412)
T 3otg_A 316 GGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE 377 (412)
T ss_dssp CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCH
T ss_pred CchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999887789999999999999875
No 21
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.84 E-value=7.3e-21 Score=141.15 Aligned_cols=128 Identities=14% Similarity=0.092 Sum_probs=97.1
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHH-----HHHhhCC-CcEEEEecCCCC---cccccc-------------------
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFL-----EVFKQLK-LPIFWKIDITND---PVLNAK------------------- 82 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~-----~~l~~~~-~~~i~~~~~~~~---~~~~~~------------------- 82 (174)
+++.|||+.||... -++.+..++ ++|...+ .++++++|.... .++...
T Consensus 27 ~~~~VlVtgGS~~~----~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATVP----FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCCS----CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCchH----HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 37999999999842 355555553 8888877 689999987554 110000
Q ss_pred --------CCCCCEEEeecCCch-hhhcCC-CccEEEecCChhhHHHHHHcCCCeEecccc----chHHHHHHHHHHcCc
Q psy16939 83 --------TLPDNVFIQKWYPQT-DILAHP-NLRLFITHGGISSLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGY 148 (174)
Q Consensus 83 --------~~~~nv~~~~~~p~~-~~l~~~-~~~~~I~hgG~~t~~eal~~g~P~i~vP~~----~dQ~~na~~l~~~G~ 148 (174)
...-++.+.+|++++ .++ + .||++|||||+||++|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 011256778888877 566 8 899999999999999999999999999974 589999999999999
Q ss_pred eeEecCCCCCHHHHHHHHHHh
Q psy16939 149 ALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 149 g~~l~~~~~~~~~l~~al~~l 169 (174)
++.+ +.++|.++++++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9887 345566666665
No 22
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.82 E-value=2.3e-20 Score=148.09 Aligned_cols=135 Identities=17% Similarity=0.181 Sum_probs=108.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC----CcEEEEecCCCCccccc--cCCCCCEEEeecCCchh-hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK----LPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTD-ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~----~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~-~l~~~~ 104 (174)
++.++|..||.+. ....+.+.++++..+ ..+++++|....+...+ +..+.++.+.+|++++. +| +.
T Consensus 180 ~~~ilv~gGs~g~-----~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~ 252 (365)
T 3s2u_A 180 RVNLLVLGGSLGA-----EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AW 252 (365)
T ss_dssp CCEEEECCTTTTC-----SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HH
T ss_pred CcEEEEECCcCCc-----cccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--cc
Confidence 6788898888864 344556667776654 35777777654322111 14567899999998875 66 78
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEecccc----chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~vP~~----~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|||+|++|++|+++.|+|+|++|+. +||..||+.+++.|+|+.+..++++.++|.+++.++++|+
T Consensus 253 aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 253 ADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCT
T ss_pred ceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCH
Confidence 99999999999999999999999999873 6999999999999999999988999999999999999886
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.67 E-value=4.9e-16 Score=119.13 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=103.1
Q ss_pred cccCCccccCChHHHHHHHhcC-C-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC--cccccc-C
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAA-K-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND--PVLNAK-T 83 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~-~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~--~~~~~~-~ 83 (174)
..++||-+.++.+++.+.-... + .+.|+|++|+... .....++++++.... ++.+.++.... .++.+. .
T Consensus 132 ~~l~G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~-----~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~ 205 (282)
T 3hbm_A 132 EVRCGFSYALIREEFYQEAKENRKKKYDFFICMGGTDI-----KNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAK 205 (282)
T ss_dssp EEEESGGGCCCCHHHHHHTTCCCCCCEEEEEECCSCCT-----TCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHH
T ss_pred eEeeCCcccccCHHHHHhhhhccccCCeEEEEECCCch-----hhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHh
Confidence 4467888888998887643222 2 4689999998743 336677888886644 56666665432 111110 1
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEec
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~ 153 (174)
...|+.+.+|++++.-+. .+||++||+|| +|++|+++.|+|+|++|...+|..||+.+++.|+++.+.
T Consensus 206 ~~~~v~v~~~~~~m~~~m-~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 206 LHNNIRLFIDHENIAKLM-NESNKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYK 273 (282)
T ss_dssp TCSSEEEEESCSCHHHHH-HTEEEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECG
T ss_pred hCCCEEEEeCHHHHHHHH-HHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcc
Confidence 234899999998886433 78999999999 799999999999999999999999999999999999975
No 24
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.38 E-value=2.7e-12 Score=100.53 Aligned_cols=131 Identities=17% Similarity=0.171 Sum_probs=99.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccccc--cCCC-CCEEEeecCCc-hhhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNA--KTLP-DNVFIQKWYPQ-TDILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~--~~~~-~nv~~~~~~p~-~~~l~~~~~ 105 (174)
++++++..|+.. .....+.++++++.. +.++++..|.....++.+ +..+ +++.+.+|+++ ..++ ..|
T Consensus 183 ~~~il~~~g~~~-----~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 255 (364)
T 1f0k_A 183 PVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 255 (364)
T ss_dssp SEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred CcEEEEEcCchH-----hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhC
Confidence 466777777774 344555566666554 456667676644222111 0122 58999999854 5566 789
Q ss_pred cEEEecCChhhHHHHHHcCCCeEecccc---chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGVPFF---GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~vP~~---~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
|++|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+.|.|..++.++.+.+++.+++.++
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc
Confidence 9999999999999999999999999987 799999999999999999987777799999999877
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.68 E-value=1.9e-07 Score=66.10 Aligned_cols=129 Identities=17% Similarity=0.135 Sum_probs=89.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccc----c--ccCCCCCEEEeecCCch---hhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVL----N--AKTLPDNVFIQKWYPQT---DILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~----~--~~~~~~nv~~~~~~p~~---~~l~ 101 (174)
++.+++..|+... ......++++++..+ .++++...+.....+ . ...+++|+.+.+++++. .++
T Consensus 22 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~- 95 (177)
T 2f9f_A 22 YGDFWLSVNRIYP-----EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY- 95 (177)
T ss_dssp CCSCEEEECCSSG-----GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH-
T ss_pred CCCEEEEEecccc-----ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH-
Confidence 3556677788753 334677778877774 577776544332221 1 11356799999999973 455
Q ss_pred CCCccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 102 HPNLRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 102 ~~~~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
..+|++|. -+...++.||+++|+|+|+-.. ..+...+++.+.|+.+ . .+.+++.++|.+++++++
T Consensus 96 -~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~--~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 96 -SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-N--ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp -HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-C--SCHHHHHHHHHHHHHCTT
T ss_pred -HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-C--CCHHHHHHHHHHHHhCHH
Confidence 77999998 2334589999999999999754 3444555556678887 3 378999999999998763
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.55 E-value=9.4e-08 Score=75.04 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCC-Cc-ccccc-CCCCCEEEeecCCc---hhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITN-DP-VLNAK-TLPDNVFIQKWYPQ---TDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~-~~-~~~~~-~~~~nv~~~~~~p~---~~~l 100 (174)
+++++++.|.... ..+ .+..+++++.. . +.++++..+... .. .+.+. ...+++.+.+++++ ..++
T Consensus 205 ~~~vl~~~gr~~~---~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 205 KKMILVTGHRRES---FGR-GFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp SEEEEEECCCBSS---CCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCCccc---cch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4678888887643 112 24444444433 3 346666444321 11 11110 12368999777664 3455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+.+|. ++.||+++|+|+|..+..+.... +.+.|.|+.++. +.++|.+++.++++|+
T Consensus 281 --~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~g~g~lv~~---d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTAGTVRLVGT---DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp --HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHHTSEEEECS---SHHHHHHHHHHHHHCH
T ss_pred --HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhCCceEEeCC---CHHHHHHHHHHHHhCh
Confidence 779999999864 58899999999999986443322 345688988864 7899999999999874
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.50 E-value=2.2e-07 Score=72.81 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCC-C-cccccc-CCCCCEEEeecCCc---hhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITN-D-PVLNAK-TLPDNVFIQKWYPQ---TDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~-~-~~~~~~-~~~~nv~~~~~~p~---~~~l 100 (174)
++.|+++.|..... + .+..++++++. . +.++++..+... . ..+.+. ...+++.+.+++++ ..++
T Consensus 198 ~~~vl~~~gr~~~~----k-~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRRENW----P-LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGGG----G-GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccch----H-HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 46677777754220 1 23444444433 2 345665545322 1 111110 12358999966654 3566
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+.+| |.+.||+++|+|+|+.+..+++.. +.+.|.|+.+. .+.++|.+++.++++|+
T Consensus 273 --~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 --RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp --HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCH
T ss_pred --HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhCh
Confidence 67999999984 556799999999999876555544 24568888874 27899999999999875
No 28
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.47 E-value=6.2e-07 Score=71.40 Aligned_cols=128 Identities=15% Similarity=0.157 Sum_probs=84.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----CCcEEEEecCCCCcc-cccc----CCCCCEEEeecCCch---hh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----KLPIFWKIDITNDPV-LNAK----TLPDNVFIQKWYPQT---DI 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~~~-~~~~----~~~~nv~~~~~~p~~---~~ 99 (174)
++.++++.|.... ....+.+..+++++.+. +.++++..++. ..+ +.+. ...+|+++.+.+++. .+
T Consensus 203 ~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~-~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l 279 (385)
T 4hwg_A 203 KQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR-TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKL 279 (385)
T ss_dssp TSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHH-HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHH
T ss_pred CCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHH
Confidence 5788888876532 01224456666666543 45677765432 111 1110 123688887776544 45
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccch-HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGD-QYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~d-Q~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ ..||++|+..|. ...||.+.|+|+|.++...+ |. ..+.|.++.+.. +.++|.+++.++++|+
T Consensus 280 ~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e-----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 280 Q--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE-----GMDAGTLIMSGF---KAERVLQAVKTITEEH 343 (385)
T ss_dssp H--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH-----HHHHTCCEECCS---SHHHHHHHHHHHHTTC
T ss_pred H--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh-----hhhcCceEEcCC---CHHHHHHHHHHHHhCh
Confidence 6 679999999886 56999999999999976443 32 256788877742 6899999999999875
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.38 E-value=4.9e-07 Score=72.14 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCC-CCcc-ccc-cCCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDIT-NDPV-LNA-KTLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~-~~~~-~~~-~~~~~nv~~~~~~p~~---~~l 100 (174)
++.++++.+-... .... +..+++++... +.++++..+.+ ...+ +.+ ....+++.+.+++++. .++
T Consensus 230 ~~~vlv~~hR~~~---~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 230 KKLILVTGHRRES---FGGG-FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp SEEEEEECSCBCC---CTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEECCccc---chhH-HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 5677776532111 1122 45555555443 34677655532 1111 111 0234689998887543 445
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..| |.+.||++.|+|+|+.....++. .+.+.|.++.+.. +.++|.+++.++++|+
T Consensus 306 --~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 --DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDP 368 (396)
T ss_dssp --HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCH
T ss_pred --HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCH
Confidence 77999999998 56689999999999985444443 2456788877642 5899999999999764
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.32 E-value=2.1e-06 Score=67.01 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=80.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCC-Ccc-cccc-CCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITN-DPV-LNAK-TLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~-~~~-~~~~-~~~~nv~~~~~~p~~---~~l 100 (174)
+++++++.|.... ....+..++++++.. +.++++..++.. +.+ +.+. ...+++.+.+++++. .++
T Consensus 205 ~~~vl~~~gr~~~----~~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 205 NRLVLMTAHRREN----LGEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp SEEEEEECCCGGG----TTHHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCeEEEEeccccc----chhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4667777776542 112345555555432 235554323211 011 1110 123689998877654 455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..| +++.||+++|+|+|..+..+... .+.+.|.|+.+.. +.+++.+++.++++|+
T Consensus 281 --~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~g~g~~v~~---d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 --ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEAGTLKLAGT---DEETIFSLADELLSDK 343 (375)
T ss_dssp --HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHTTSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred --HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecCCceEEcCC---CHHHHHHHHHHHHhCh
Confidence 77999999874 56999999999999885433322 2345678888752 7899999999999774
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.32 E-value=4.1e-07 Score=72.81 Aligned_cols=128 Identities=17% Similarity=0.207 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCC-CCcc-ccc-cCCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDIT-NDPV-LNA-KTLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~-~~~~-~~~-~~~~~nv~~~~~~p~~---~~l 100 (174)
++.++++.|.... ..+ .+..+++++.. . +.++++..+++ ...+ +.+ ....+++++.+++++. .++
T Consensus 224 ~~~vlv~~~r~~~---~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 224 NRLILMTAHRREN---LGE-PMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp CEEEEECCCCHHH---HTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccc---cCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 5677776653211 011 13444444433 3 34677765543 1111 111 0234689999998743 455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..|..+ .||++.|+|+|++|...+++. +.+.|.++.+.. +.++|.+++.++++|+
T Consensus 300 --~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 --RKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNK 362 (403)
T ss_dssp --HHEEEEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred --HhcCEEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCH
Confidence 67999999986433 799999999999965555443 246788888753 7899999999998764
No 32
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.31 E-value=4.3e-07 Score=71.16 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hC-CCcEEEEecCCCCccccc--cCCCCCEEEeecCCchhhhcC-CCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-QL-KLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTDILAH-PNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~-~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~~l~~-~~~~ 106 (174)
++.+++..|+.... -..+.+-+.+..+. .. +.++++...+.....+.+ ....+++.+.+++++.++... ..+|
T Consensus 197 ~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 274 (394)
T 3okp_A 197 TTPVIACNSRLVPR--KGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD 274 (394)
T ss_dssp TCCEEEEESCSCGG--GCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS
T ss_pred CceEEEEEeccccc--cCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC
Confidence 45778888887431 12222222233222 22 346666544332221111 134589999999976653221 7799
Q ss_pred EEEe-----------cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFIT-----------HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~-----------hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|. -|...++.||+++|+|+|+-+..+-. ..+. .|.|..++.. +.+++.+++.++++++
T Consensus 275 ~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----e~i~-~~~g~~~~~~--d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP----ETVT-PATGLVVEGS--DVDKLSELLIELLDDP 345 (394)
T ss_dssp EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG----GGCC-TTTEEECCTT--CHHHHHHHHHHHHTCH
T ss_pred EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH----HHHh-cCCceEeCCC--CHHHHHHHHHHHHhCH
Confidence 9998 66678999999999999997653211 1222 2477777543 6899999999998764
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.30 E-value=9e-06 Score=63.18 Aligned_cols=130 Identities=13% Similarity=0.179 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC------CcEEEEecCCCCccc----cccCCCCCEEEeecCCc-hhh
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK------LPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ-TDI 99 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~------~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~-~~~ 99 (174)
+++.+++..|+... ......+++++.... .++++ +|.....++ .+....+++.+.++... ..+
T Consensus 194 ~~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFV-VGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEE-ESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CCCeEEEEeccchh-----hcCHHHHHHHHHHhHhccCCceEEEE-EcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHH
Confidence 34678888887753 233566667776653 24444 443222211 11134578999998654 345
Q ss_pred hcCCCccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ ..+|++|. -|...++.||+++|+|+|+-+..+ +...+++.+.|..+.. ..+.+++.+++.++++|+
T Consensus 268 ~--~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 268 M--AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp H--HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCH
T ss_pred H--HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCC----chhhhccCCceEEeCC-CCCHHHHHHHHHHHHcCh
Confidence 5 67999997 556789999999999999986532 3456677788998852 237899999999998764
No 34
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.20 E-value=9.5e-06 Score=64.30 Aligned_cols=131 Identities=8% Similarity=-0.059 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC--------Cccc-cccCCCCCEEEeecCC---c--
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN--------DPVL-NAKTLPDNVFIQKWYP---Q-- 96 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~--------~~~~-~~~~~~~nv~~~~~~p---~-- 96 (174)
...+++..|...... ....+++.+....... +.++++...+.. +.++ .+....+++.+.+|++ +
T Consensus 230 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~ 308 (416)
T 2x6q_A 230 EKPIITQVSRFDPWK-GIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHARE 308 (416)
T ss_dssp TSCEEEEECCCCTTS-CHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHH
T ss_pred CCcEEEEEecccccc-CHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHH
Confidence 456677778765421 1123333333333333 456666655432 1111 1113457999999765 2
Q ss_pred -hhhhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 97 -TDILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 -~~~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..++ ..+|++|... ...++.||+++|+|+|.-+. ..+...+.+.+.|..++ +.+++.+++.++++
T Consensus 309 ~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll~ 378 (416)
T 2x6q_A 309 VNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVVLYLLK 378 (416)
T ss_dssp HHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHHHHHHH
T ss_pred HHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHHHHHHh
Confidence 2345 6799999765 46789999999999999764 23445555566888885 78999999999987
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 379 ~~ 380 (416)
T 2x6q_A 379 HP 380 (416)
T ss_dssp CH
T ss_pred CH
Confidence 64
No 35
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.17 E-value=1.9e-05 Score=62.86 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC---CCcEEEEec----CCCCccc----cccCCCCCEEEeecCCchh-
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL---KLPIFWKID----ITNDPVL----NAKTLPDNVFIQKWYPQTD- 98 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~---~~~~i~~~~----~~~~~~~----~~~~~~~nv~~~~~~p~~~- 98 (174)
+.+.+++..|...... ....+++.+.....+. +.++++... +.....+ .+..+.+++.+.+++++.+
T Consensus 241 ~~~~~i~~~G~~~~~K-g~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 319 (438)
T 3c48_A 241 LHTKVVAFVGRLQPFK-GPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSEL 319 (438)
T ss_dssp SSSEEEEEESCBSGGG-CHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred CCCcEEEEEeeecccC-CHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence 3467777888875421 1122233333332332 235555443 1121111 1113467999999998654
Q ss_pred --hhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 99 --ILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 99 --~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++ ..+|++|... ...++.||+++|+|+|+-+.. .....+.+.+.|+.++.. +.+++.++|.++++|
T Consensus 320 ~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~ 391 (438)
T 3c48_A 320 VAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGH--SPHAWADALATLLDD 391 (438)
T ss_dssp HHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEESSC--CHHHHHHHHHHHHHC
T ss_pred HHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEECCCC--CHHHHHHHHHHHHcC
Confidence 45 6799999763 356899999999999997643 233445555678888643 689999999999876
Q ss_pred C
Q psy16939 173 P 173 (174)
Q Consensus 173 ~ 173 (174)
+
T Consensus 392 ~ 392 (438)
T 3c48_A 392 D 392 (438)
T ss_dssp H
T ss_pred H
Confidence 4
No 36
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.09 E-value=4.5e-06 Score=65.63 Aligned_cols=129 Identities=12% Similarity=0.051 Sum_probs=83.0
Q ss_pred eEEEEcCCC-cCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccccc--cCCCCCEEEeecCCch---hhhcCCCc
Q psy16939 34 FVYMSFGSV-VDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQT---DILAHPNL 105 (174)
Q Consensus 34 ~v~vs~Gs~-~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~---~~l~~~~~ 105 (174)
.+++..|+. ... -..+.+-+.+..+.+. +.++++...+.. .++.+ +...+++.+.+++++. .++ ..+
T Consensus 209 ~~i~~~G~~~~~~--Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~--~~a 283 (406)
T 2gek_A 209 RTVLFLGRYDEPR--KGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAM--RSA 283 (406)
T ss_dssp CEEEEESCTTSGG--GCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHH--HHS
T ss_pred eEEEEEeeeCccc--cCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHH--HHC
Confidence 577778877 431 1223232333333322 346655544333 22111 0226789999999875 455 679
Q ss_pred cEEEecCC-----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGG-----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG-----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|.-.. ..++.||+++|+|+|+-+. ......+.+...|..++.+ +.+++.+++.++++++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD--DADGMAAALIGILEDD 350 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT--CHHHHHHHHHHHHHCH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC--CHHHHHHHHHHHHcCH
Confidence 99996643 5589999999999999865 3445556666778887543 6899999999998764
No 37
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.08 E-value=3.1e-05 Score=55.13 Aligned_cols=129 Identities=10% Similarity=0.066 Sum_probs=80.0
Q ss_pred CeEEEEcCCCc-CCCCCCHHHHHHHHHHHh---hC-CCcEEEEecCC--CCccccc--cCCCCCEEE-eecCCchh---h
Q psy16939 33 GFVYMSFGSVV-DPTKLSEETKLGFLEVFK---QL-KLPIFWKIDIT--NDPVLNA--KTLPDNVFI-QKWYPQTD---I 99 (174)
Q Consensus 33 ~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~---~~-~~~~i~~~~~~--~~~~~~~--~~~~~nv~~-~~~~p~~~---~ 99 (174)
..+++..|... .. -..+.+-+.+..+. +. +.++++...+. ....+.+ ...+ ++.+ .+++++.+ +
T Consensus 36 ~~~i~~~G~~~~~~--K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~ 112 (200)
T 2bfw_A 36 GVTFMFIGRFDRGQ--KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 112 (200)
T ss_dssp CEEEEEESCBCSSS--SCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCEEEEeecccccc--CCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHH
Confidence 34777888876 32 13333333344442 22 23555544333 1111100 0233 8999 99998543 4
Q ss_pred hcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc-CC
Q psy16939 100 LAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN-DP 173 (174)
Q Consensus 100 l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~-~~ 173 (174)
+ ..+|++|... ...++.||+++|+|+|+-... .....+ ..+.|..++.. +.+++.+++.++++ ++
T Consensus 113 ~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~~~g~~~~~~--~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 113 Y--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAILKALELSR 182 (200)
T ss_dssp H--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHHCCH
T ss_pred H--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CCCceEEecCC--CHHHHHHHHHHHHhcCH
Confidence 4 7899999654 256899999999998887542 344445 55678887543 68999999999987 64
No 38
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.05 E-value=1.7e-05 Score=65.41 Aligned_cols=133 Identities=18% Similarity=0.238 Sum_probs=83.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec-CCCC-cc----ccccCCC-CCEEEeecCCchh---hhcC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID-ITND-PV----LNAKTLP-DNVFIQKWYPQTD---ILAH 102 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~-~~~~-~~----~~~~~~~-~nv~~~~~~p~~~---~l~~ 102 (174)
++|+ ..|.... +....+++.+...+++.+.-.++.+| .... .+ +.+..+. +++.+.+++++.+ ++
T Consensus 377 ~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~-- 451 (568)
T 2vsy_A 377 GVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARY-- 451 (568)
T ss_dssp SCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHG--
T ss_pred CEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHH--
Confidence 4444 5565544 23556666666655555543344445 3221 11 1111344 7899999998544 44
Q ss_pred CCccEEEe---cCChhhHHHHHHcCCCeEeccccch-HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 103 PNLRLFIT---HGGISSLMEASSLGVPVLGVPFFGD-QYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 103 ~~~~~~I~---hgG~~t~~eal~~g~P~i~vP~~~d-Q~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|. .|+..++.||+++|+|+|..|-..- -..-+..+...|+...+.. +.+++.+++.++++|+
T Consensus 452 ~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 452 RHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDP 523 (568)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCH
T ss_pred hcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCH
Confidence 77999983 2667899999999999999764211 1122455666787776643 7889999999988764
No 39
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.98 E-value=1.6e-05 Score=62.55 Aligned_cols=132 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh-CCCcEEEEecCCCCccc----cccCCCCCEEEeecCCc-hhhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ-LKLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ-TDILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~-~~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~-~~~l~~~~~ 105 (174)
++.+++..|..... -..+.+-+.+..+.+ .+.++++...+....++ .+....+++.+.++... ..++ ..+
T Consensus 210 ~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~--~~a 285 (394)
T 2jjm_A 210 SEKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL--AMS 285 (394)
T ss_dssp --CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHH--HTC
T ss_pred CCeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHH--HhC
Confidence 35667777877531 122222222232322 24555554433321111 11123568888887543 4566 679
Q ss_pred cEEE----ecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFI----THGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I----~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++| .-|...++.||+++|+|+|+-+..+ ....+.+.+.|+.++.. +.+++.+++.++++|+
T Consensus 286 dv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~~--d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 286 DLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEVG--DTTGVADQAIQLLKDE 351 (394)
T ss_dssp SEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECTT--CHHHHHHHHHHHHHCH
T ss_pred CEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCCC--CHHHHHHHHHHHHcCH
Confidence 9999 5566789999999999999986532 12223334578887543 6899999999998764
No 40
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.98 E-value=5.8e-05 Score=59.67 Aligned_cols=136 Identities=10% Similarity=0.036 Sum_probs=83.9
Q ss_pred HhcCCCCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhC----CCcEEEEecCCCC--c---cccccCCCCCEEEeecCCc
Q psy16939 27 ADAAKGGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQL----KLPIFWKIDITND--P---VLNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 27 ~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~--~---~~~~~~~~~nv~~~~~~p~ 96 (174)
+...++ .+++..|+.. .. -..+.+-+.+..+... +.++++...+... . +..+ ..++++.+.+|+++
T Consensus 246 ~~~~~~-~~i~~~G~~~~~~--Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~-~~~~~~~~~g~~~~ 321 (439)
T 3fro_A 246 FGMDEG-VTFMFIGRFDRGQ--KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEE-KHGNVKVITEMLSR 321 (439)
T ss_dssp HTCCSC-EEEEEECCSSCTT--BCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHH-HCTTEEEECSCCCH
T ss_pred cCCCCC-cEEEEEccccccc--ccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHh-hcCCEEEEcCCCCH
Confidence 333334 8888889886 42 1334444444444442 3355554433221 1 1111 24466777888887
Q ss_pred hhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 97 TDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 ~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.++... ..||++|.- |-..++.||+++|+|+|.-... .....+ +.|.|..++.. +.+++.+++.++++
T Consensus 322 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~e~~-~~~~g~~~~~~--d~~~la~~i~~ll~ 394 (439)
T 3fro_A 322 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAILKALE 394 (439)
T ss_dssp HHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----CcceeE-EcCceEEeCCC--CHHHHHHHHHHHHh
Confidence 653211 789999954 4457999999999999997542 222233 24688888643 68999999999987
Q ss_pred -CC
Q psy16939 172 -DP 173 (174)
Q Consensus 172 -~~ 173 (174)
++
T Consensus 395 ~~~ 397 (439)
T 3fro_A 395 LSR 397 (439)
T ss_dssp HTT
T ss_pred cCH
Confidence 54
No 41
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.90 E-value=3.3e-05 Score=62.75 Aligned_cols=131 Identities=11% Similarity=0.080 Sum_probs=84.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC----c-EEEEecC--CC--------------Cccc----cccCCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL----P-IFWKIDI--TN--------------DPVL----NAKTLPD 86 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~----~-~i~~~~~--~~--------------~~~~----~~~~~~~ 86 (174)
...+++..|.... ..-...++++++.... . .++.+|. .. ..++ .+..+.+
T Consensus 261 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 261 ELPAIIASSRLDQ-----KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp TSCEEEECSCCCG-----GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred CCcEEEEeecCcc-----ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 4567788888743 3335666777666531 2 3444554 11 1111 1113467
Q ss_pred CEEEeecCCchhhhcC-CCc----cEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCC
Q psy16939 87 NVFIQKWYPQTDILAH-PNL----RLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL 157 (174)
Q Consensus 87 nv~~~~~~p~~~~l~~-~~~----~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~ 157 (174)
++.+.+++++.++... ..+ |++|.- |-..++.||+++|+|+|+-... .....+.+...|..++..
T Consensus 336 ~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~-- 409 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE-- 409 (499)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT--
T ss_pred eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC--
Confidence 8999999976543221 679 999954 3356899999999999988642 233444555578888643
Q ss_pred CHHHHHHHHHHhhcCC
Q psy16939 158 TKQSFLKNAQTMLNDP 173 (174)
Q Consensus 158 ~~~~l~~al~~ll~~~ 173 (174)
+.+++.++|.++++|+
T Consensus 410 d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 410 DPEDIARGLLKAFESE 425 (499)
T ss_dssp CHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHhCH
Confidence 6899999999998764
No 42
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.86 E-value=0.0002 Score=57.08 Aligned_cols=119 Identities=15% Similarity=0.080 Sum_probs=79.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEe
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFIT 110 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~ 110 (174)
+.+++..|.... .+..+..+. +.. +.++++...+. .. +....+++.+.+++++.++..+ ..+|++|.
T Consensus 222 ~~~i~~vGrl~~----~Kg~~~~l~---~~~~~~~l~ivG~g~-~~---~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ 290 (406)
T 2hy7_A 222 GIHAVAVGSMLF----DPEFFVVAS---KAFPQVTFHVIGSGM-GR---HPGYGDNVIVYGEMKHAQTIGYIKHARFGIA 290 (406)
T ss_dssp SEEEEEECCTTB----CHHHHHHHH---HHCTTEEEEEESCSS-CC---CTTCCTTEEEECCCCHHHHHHHHHTCSEEEC
T ss_pred CcEEEEEecccc----ccCHHHHHH---HhCCCeEEEEEeCch-HH---hcCCCCCEEEcCCCCHHHHHHHHHhcCEEEE
Confidence 378888898865 455532222 223 34565553332 22 1145789999999986653221 77999985
Q ss_pred c----CChhhHHHHH-------HcCCCeEeccccchHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 111 H----GGISSLMEAS-------SLGVPVLGVPFFGDQYRNMVLLRHRGYALI-EPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 111 h----gG~~t~~eal-------~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~-l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
- |-..++.||+ ++|+|+|.-.. +..-..|.. +..+ +.+++.++|.++++++.
T Consensus 291 ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 291 PYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp CBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred CCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 2 3456789999 99999998754 444456777 7544 68999999999998863
No 43
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.85 E-value=8.4e-06 Score=56.41 Aligned_cols=126 Identities=12% Similarity=0.146 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC----CcEEEEecCCCCccccc--cCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK----LPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~----~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
++++++..|.... ......+++++.... .++++...+.....+.+ ...+.++.+ +++++.++... ..
T Consensus 1 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~ 74 (166)
T 3qhp_A 1 TPFKIAMVGRYSN-----EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKT 74 (166)
T ss_dssp CCEEEEEESCCST-----TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTT
T ss_pred CceEEEEEeccch-----hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHh
Confidence 3678888998854 233666667766653 24454433322111110 022337888 99986543221 78
Q ss_pred ccEEEec----CChhhHHHHHHcCC-CeEecc-c--cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITH----GGISSLMEASSLGV-PVLGVP-F--FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~h----gG~~t~~eal~~g~-P~i~vP-~--~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|++|.- |...++.||+++|+ |+|.-. . ..+-..+ .+. .+.. -+.+++.+++.++++++
T Consensus 75 adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~------~~~--~~~~--~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 75 CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD------ERS--LFEP--NNAKDLSAKIDWWLENK 141 (166)
T ss_dssp CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS------GGG--EECT--TCHHHHHHHHHHHHHCH
T ss_pred CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC------Cce--EEcC--CCHHHHHHHHHHHHhCH
Confidence 9999973 44569999999997 999932 1 1121111 122 3332 37899999999998764
No 44
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.81 E-value=1.7e-05 Score=61.26 Aligned_cols=125 Identities=10% Similarity=0.003 Sum_probs=82.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccc--cCCCCCEEEeecCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~---~~l~~~~~~~ 107 (174)
..+++..|.... ..-...++++++..+.++++...+.....+.+ +...+++.+.+++++. .++ ..+|+
T Consensus 162 ~~~i~~vG~~~~-----~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv 234 (342)
T 2iuy_A 162 EDFLLFMGRVSP-----HKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHA 234 (342)
T ss_dssp CSCEEEESCCCG-----GGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSE
T ss_pred CCEEEEEecccc-----ccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCE
Confidence 345666777643 33356666777666777777554432111100 0234899999999876 455 77999
Q ss_pred EEec--------------CChhhHHHHHHcCCCeEeccccchHHHHHHHHHH--cCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 108 FITH--------------GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH--RGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 108 ~I~h--------------gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~--~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|.. |-..++.||+++|+|+|.-...+ ....+++ -..|+.++ . +.+++.+++.++++
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~--~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTD--F-APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSC--C-CHHHHHHHHHTSCC
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcC--C-CHHHHHHHHHHHHH
Confidence 9943 33578999999999999987532 4455555 45666664 3 78899999988763
No 45
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.78 E-value=5.3e-05 Score=60.66 Aligned_cols=83 Identities=8% Similarity=-0.059 Sum_probs=59.2
Q ss_pred CCCCEEEeecCCchhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCC
Q psy16939 84 LPDNVFIQKWYPQTDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLT 158 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~ 158 (174)
...++.+.++++..++..+ ..||+++.- +=..++.||+++|+|+|. ...+ ....++.-..|+.++.. +
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~--d 365 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL--N 365 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC--S
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC--C
Confidence 4568999999986653322 789999963 224568999999999998 3222 11333444578877654 6
Q ss_pred HHHHHHHHHHhhcCC
Q psy16939 159 KQSFLKNAQTMLNDP 173 (174)
Q Consensus 159 ~~~l~~al~~ll~~~ 173 (174)
.+++.++|.++++|+
T Consensus 366 ~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 366 PENIAETLVELCMSF 380 (413)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999875
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.77 E-value=4e-05 Score=60.55 Aligned_cols=130 Identities=8% Similarity=0.069 Sum_probs=77.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCCC------ccccc----cCCCCC-------EE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITND------PVLNA----KTLPDN-------VF 89 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~~------~~~~~----~~~~~n-------v~ 89 (174)
...+++..|.... ..-...++++++. . +.++++...+... ..+.+ ..+.++ +.
T Consensus 183 ~~~~il~vGr~~~-----~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTA-----RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSG-----GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCch-----hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceee
Confidence 4678888888643 2223334444333 2 3577776554322 11110 124444 78
Q ss_pred EeecCCchhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCc---------------e
Q psy16939 90 IQKWYPQTDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY---------------A 149 (174)
Q Consensus 90 ~~~~~p~~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~---------------g 149 (174)
+.+++++.++... ..||++|.- |...++.||+++|+|+|.-... .....+.+... |
T Consensus 258 ~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 258 NRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTTCS
T ss_pred ccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccccC
Confidence 8899985543221 779999953 4456899999999999986542 23333332221 4
Q ss_pred e--EecCCCCCHHHHHHHHHHhhcCC
Q psy16939 150 L--IEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 150 ~--~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ .+... +.+++.+++ ++++|+
T Consensus 334 ~~gl~~~~--d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGII--DVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEEC--CHHHHHHHH-HHTTSH
T ss_pred cceeeCCC--CHHHHHHHH-HHhcCH
Confidence 4 55433 789999999 998774
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.73 E-value=9.2e-05 Score=62.10 Aligned_cols=134 Identities=12% Similarity=0.109 Sum_probs=89.5
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE--ecCCC-Cc-----cccccCCCCCEEEeecCCchhhhc-CC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK--IDITN-DP-----VLNAKTLPDNVFIQKWYPQTDILA-HP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~--~~~~~-~~-----~~~~~~~~~nv~~~~~~p~~~~l~-~~ 103 (174)
.++|.+++... +...+.++...+.+++.+..++|. .+... .. ++.+..+.+.+.+.+..|..+.++ +.
T Consensus 441 ~v~Fg~fn~~~---Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTTM---KLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECST---TCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 45666666654 478999999999999998877663 34221 11 111112346888899888766432 26
Q ss_pred CccEEEec---CChhhHHHHHHcCCCeEeccccc-hHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHhhcC
Q psy16939 104 NLRLFITH---GGISSLMEASSLGVPVLGVPFFG-DQYRNMVLLRHRGYALI-EPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 104 ~~~~~I~h---gG~~t~~eal~~g~P~i~vP~~~-dQ~~na~~l~~~G~g~~-l~~~~~~~~~l~~al~~ll~~ 172 (174)
.+|+++.- +|.+|++||+..|+|+|..+-.. .-..-+..+...|+... +.. +.++..+...++.+|
T Consensus 518 ~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 518 NCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAEN 588 (631)
T ss_dssp TCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHC
T ss_pred cCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCC
Confidence 79999865 78899999999999999997532 22334455677888752 422 566666666666655
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.69 E-value=0.00031 Score=60.23 Aligned_cols=119 Identities=12% Similarity=0.178 Sum_probs=87.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-----c-ccc-cCCCCCEEEeecCCchhhhc-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-----V-LNA-KTLPDNVFIQKWYPQTDILA-HP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-----~-~~~-~~~~~nv~~~~~~p~~~~l~-~~ 103 (174)
..++|.+|..... +.++.+..-.+.|++.+..++|........ + +.+ ...++++.+.+..+..+.|. +.
T Consensus 522 ~~v~f~~fN~~~K---i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 522 DAIVYCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TSEEEECCSCGGG---CCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCEEEEeCCcccc---CCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 4578888877765 899999999999999999888887653321 1 111 12357899999888666443 37
Q ss_pred CccEEEe---cCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCceeEec
Q psy16939 104 NLRLFIT---HGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 104 ~~~~~I~---hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g~~l~ 153 (174)
.+|+++. .+|.+|++|||..|+|+|.+|- ..--+.-+..+...|+...+-
T Consensus 599 ~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 599 LADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC
T ss_pred CCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc
Confidence 7999997 7888999999999999999984 223444566667778876654
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.67 E-value=0.00027 Score=57.05 Aligned_cols=126 Identities=5% Similarity=-0.171 Sum_probs=78.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-C-c---cccccCCCCCEE-EeecCCch---hhhcCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-D-P---VLNAKTLPDNVF-IQKWYPQT---DILAHP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~-~---~~~~~~~~~nv~-~~~~~p~~---~~l~~~ 103 (174)
..+++..|..... -..+.+-+.+..+.+.+.++++...+.. . . ++.. ..++++. +.++ +.. .++ .
T Consensus 291 ~~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~-~~~~~v~~~~g~-~~~~~~~~~--~ 364 (485)
T 1rzu_A 291 SPLFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAAS-RHHGRVGVAIGY-NEPLSHLMQ--A 364 (485)
T ss_dssp SCEEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHH-HTTTTEEEEESC-CHHHHHHHH--H
T ss_pred CeEEEEEccCccc--cCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHH-hCCCcEEEecCC-CHHHHHHHH--h
Confidence 4588888887642 1333333333333333567777655431 1 1 1111 3457887 6777 443 345 7
Q ss_pred CccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHhh
Q psy16939 104 NLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR---------GYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 104 ~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~---------G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
.+|++|.- |-..++.||+++|+|+|+-... .....+.+- +.|..++.. +.+++.++|.+++
T Consensus 365 ~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ll 438 (485)
T 1rzu_A 365 GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRRTV 438 (485)
T ss_dssp HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHHHH
T ss_pred cCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcceEeCCC--CHHHHHHHHHHHH
Confidence 79999954 4467899999999999997542 233444433 678888643 6899999999998
No 50
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.59 E-value=0.00022 Score=56.24 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=60.2
Q ss_pred CCEEEeecCCchh-hhcCCCccEEEec-----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCH
Q psy16939 86 DNVFIQKWYPQTD-ILAHPNLRLFITH-----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTK 159 (174)
Q Consensus 86 ~nv~~~~~~p~~~-~l~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~ 159 (174)
.++.+.++..... ++ ..+|+++.- +|..++.||+++|+|+|.-|..+........+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 3577777655444 45 789996652 345789999999999998776666666666666678877763 68
Q ss_pred HHHHHHHHHhhcC
Q psy16939 160 QSFLKNAQTMLND 172 (174)
Q Consensus 160 ~~l~~al~~ll~~ 172 (174)
++|.+++.++++|
T Consensus 334 ~~La~ai~~ll~d 346 (374)
T 2xci_A 334 TELVTKLTELLSV 346 (374)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhH
Confidence 9999999999976
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.50 E-value=0.00038 Score=56.19 Aligned_cols=127 Identities=8% Similarity=-0.089 Sum_probs=77.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-----CccccccCCCCCEE-EeecCCch---hhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-----DPVLNAKTLPDNVF-IQKWYPQT---DILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~nv~-~~~~~p~~---~~l~~ 102 (174)
+..+++..|..... -..+.+-+.+..+.+.+.++++...+.. +.++.. ..++++. +.++ +.. .++
T Consensus 291 ~~~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~-~~~~~v~~~~g~-~~~~~~~~~-- 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQ--KGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAA-EYPGQVGVQIGY-HEAFSHRIM-- 364 (485)
T ss_dssp TSCEEEEEEEESGG--GCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHH-HSTTTEEEEESC-CHHHHHHHH--
T ss_pred CCeEEEEeccCccc--cCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHH-hCCCcEEEeCCC-CHHHHHHHH--
Confidence 35677777876531 1233333333333333567776654431 111111 2357886 7777 433 345
Q ss_pred CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHh
Q psy16939 103 PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR---------GYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 103 ~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~---------G~g~~l~~~~~~~~~l~~al~~l 169 (174)
..+|++|.- |-..++.||+++|+|+|+-... .....+.+- +.|..++.. +.+++.++|.++
T Consensus 365 ~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~l 438 (485)
T 2qzs_A 365 GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIRRA 438 (485)
T ss_dssp HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHHHH
T ss_pred HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCC--CHHHHHHHHHHH
Confidence 779999954 3457899999999999987542 233334433 678888643 689999999999
Q ss_pred h
Q psy16939 170 L 170 (174)
Q Consensus 170 l 170 (174)
+
T Consensus 439 l 439 (485)
T 2qzs_A 439 F 439 (485)
T ss_dssp H
T ss_pred H
Confidence 8
No 52
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.50 E-value=0.004 Score=54.02 Aligned_cols=128 Identities=8% Similarity=-0.010 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-----CcEEEEecCCC-----------Ccc----ccccCCCCCEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-----LPIFWKIDITN-----------DPV----LNAKTLPDNVFIQ 91 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-----~~~i~~~~~~~-----------~~~----~~~~~~~~nv~~~ 91 (174)
.+.+++..|.... ..-+..++++++... .++++..++.. ..+ ..+..+.+++.+.
T Consensus 571 ~~~vIl~vGRl~~-----~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 571 KKPILFTMARLDR-----VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TSCEEEEECCCCT-----TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCeEEEEEccCcc-----cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4678888888754 233555666665553 35666554441 011 1111356789999
Q ss_pred ecCC----chhhhcC-C-CccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHH
Q psy16939 92 KWYP----QTDILAH-P-NLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQS 161 (174)
Q Consensus 92 ~~~p----~~~~l~~-~-~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~ 161 (174)
++.+ ..++... . .+|++|.- |-..++.||+++|+|+|+-...+ ....+.+-..|+.++.. +.++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG----~~EiV~dg~~Gllv~p~--D~e~ 719 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVHGKSGFHIDPY--HGDQ 719 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBT----HHHHCCBTTTBEEECTT--SHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCC----hHHHHccCCcEEEeCCC--CHHH
Confidence 8654 3444321 2 57899964 44679999999999999964322 23344455678888654 6788
Q ss_pred HHHHHHHhh
Q psy16939 162 FLKNAQTML 170 (174)
Q Consensus 162 l~~al~~ll 170 (174)
+.++|.+++
T Consensus 720 LA~aI~~lL 728 (816)
T 3s28_A 720 AADTLADFF 728 (816)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887665
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.27 E-value=0.0086 Score=46.63 Aligned_cols=114 Identities=12% Similarity=0.041 Sum_probs=74.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~ 110 (174)
.+.+++-.|+.... ..+.+ + ..+.++++...+.. . ..+ |+.+.+++|..++..+ .++|..+.
T Consensus 177 ~~~~i~yaG~l~k~-----~~L~~----l-~~~~~f~ivG~G~~-~-----~l~-nV~f~G~~~~~el~~~l~~~~~~lv 239 (339)
T 3rhz_A 177 LKREIHFPGNPERF-----SFVKE----W-KYDIPLKVYTWQNV-E-----LPQ-NVHKINYRPDEQLLMEMSQGGFGLV 239 (339)
T ss_dssp EEEEEEECSCTTTC-----GGGGG----C-CCSSCEEEEESCCC-C-----CCT-TEEEEECCCHHHHHHHHHTEEEEEC
T ss_pred CCcEEEEeCCcchh-----hHHHh----C-CCCCeEEEEeCCcc-c-----CcC-CEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 34677778887641 11111 1 12456666554433 2 345 9999999998876432 34555555
Q ss_pred c--CC---------hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 111 H--GG---------ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 111 h--gG---------~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
. +. .+-+.|++++|+|+|+.+ ...++..+++.++|+.++ +.+++.+++.++.
T Consensus 240 ~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~ 302 (339)
T 3rhz_A 240 WMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK----DVEEAIMKVKNVN 302 (339)
T ss_dssp CCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES----SHHHHHHHHHHCC
T ss_pred ECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC----CHHHHHHHHHHhC
Confidence 4 21 245889999999999865 345777888899999985 4677777777653
No 54
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=95.93 E-value=0.2 Score=35.22 Aligned_cols=134 Identities=8% Similarity=0.012 Sum_probs=72.2
Q ss_pred HHHHHHHhcCCCCeEEEEcCC-CcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGS-VVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
.++-+++... +..+|+.|. .+. +....++....+-+++-..+... .+... ..-....+.++++....
T Consensus 35 ~~lg~~La~~--g~~lVsGGg~~Gi--------m~aa~~gAl~~gG~tigVlP~~~-~~~~~-~~~~~~i~~~~~~~Rk~ 102 (176)
T 2iz6_A 35 NELGKQIATH--GWILLTGGRSLGV--------MHEAMKGAKEAGGTTIGVLPGPD-TSEIS-DAVDIPIVTGLGSARDN 102 (176)
T ss_dssp HHHHHHHHHT--TCEEEEECSSSSH--------HHHHHHHHHHTTCCEEEEECC------CC-TTCSEEEECCCCSSSCC
T ss_pred HHHHHHHHHC--CCEEEECCCccCH--------hHHHHHHHHHcCCEEEEEeCchh-hhhhc-cCCceeEEcCCHHHHHH
Confidence 3455556554 588888887 543 56666666566656555554321 11100 11123445555554432
Q ss_pred hcCCCccEEE-ecCChhhHHHH---HHcCCCeEeccccchHHHHHHHHHHcCce-eEecCCCCCHHHHHHHHHHhhcC
Q psy16939 100 LAHPNLRLFI-THGGISSLMEA---SSLGVPVLGVPFFGDQYRNMVLLRHRGYA-LIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 100 l~~~~~~~~I-~hgG~~t~~ea---l~~g~P~i~vP~~~dQ~~na~~l~~~G~g-~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+....+|.+| --||.||+-|+ +.+++|++++|.+. .....+...-.. +.+. -+++++.+.+++.+..
T Consensus 103 ~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~---~~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 103 INALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA---ADVAGAIAAVKQLLAK 174 (176)
T ss_dssp CCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE---SSHHHHHHHHHHHHHC
T ss_pred HHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc---CCHHHHHHHHHHHHHh
Confidence 2223455544 46778887665 67999999999733 222233333222 2221 1688888888877643
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=95.88 E-value=0.021 Score=44.48 Aligned_cols=136 Identities=13% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCCCC-EEEeecCC---chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLPDN-VFIQKWYP---QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~n-v~~~~~~p---~~~~l~~~~ 104 (174)
++.|.+..|+......++.+.+.++++.+.+.+.++++..++.+.+ ++.+ ..+.+ +.+.+-.+ ...++ ..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-~~~~~~~~l~g~~sl~e~~ali--~~ 261 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-QMETKPIVATGKFQLGPLAAAM--NR 261 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-TCSSCCEECTTCCCHHHHHHHH--HT
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-hcccccEEeeCCCCHHHHHHHH--Hh
Confidence 6889999998655556888999999999887788887744433321 1111 22222 22222222 33455 67
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchH-------------HHHHHHHHH---cCc--eeEecCCCCCHHHHHH
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQ-------------YRNMVLLRH---RGY--ALIEPIQTLTKQSFLK 164 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ-------------~~na~~l~~---~G~--g~~l~~~~~~~~~l~~ 164 (174)
||++|+.-. |.++=|.+.|+|+|.+ |..... ...+. +.. ..+ +-.---++.+++++.+
T Consensus 262 a~~~i~~Ds-G~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~ 339 (349)
T 3tov_A 262 CNLLITNDS-GPMHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIK 339 (349)
T ss_dssp CSEEEEESS-HHHHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHH
T ss_pred CCEEEECCC-CHHHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHH
Confidence 999999854 3455588899999998 431111 11122 222 112 1000124679999999
Q ss_pred HHHHhhcC
Q psy16939 165 NAQTMLND 172 (174)
Q Consensus 165 al~~ll~~ 172 (174)
+++++|..
T Consensus 340 a~~~lL~~ 347 (349)
T 3tov_A 340 AAETLLLE 347 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999864
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.71 E-value=0.022 Score=43.76 Aligned_cols=95 Identities=7% Similarity=0.038 Sum_probs=61.4
Q ss_pred CCeEEEEcCC-CcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCC----CCE-EEeecCC---chhh
Q psy16939 32 GGFVYMSFGS-VVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLP----DNV-FIQKWYP---QTDI 99 (174)
Q Consensus 32 ~~~v~vs~Gs-~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~----~nv-~~~~~~p---~~~~ 99 (174)
++.|.+..|+ ......++.+.+.++++.|.+.+.++++..++.+.+ ++.+ ..+ .++ .+.+..+ ...+
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~-~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA-ALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT-TSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHH-hhhhccccceEeccCcCCHHHHHHH
Confidence 5789999998 323234788899999999887788887754443311 1111 122 233 2233332 2445
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
+ ..||++|+.-. |+++-|.+.|+|+|.+
T Consensus 259 i--~~a~l~I~~Ds-g~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 I--AACKAIVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_dssp H--HTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred H--HhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence 6 67999999853 5677788999999988
No 57
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=95.02 E-value=0.46 Score=33.91 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=51.4
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe--ecCC-chh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ--KWYP-QTD 98 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~--~~~p-~~~ 98 (174)
++-+++.+. +..+|+.|..+ ++....++....+-+++-+...+... .......+. ..++ ...
T Consensus 49 ~lg~~LA~~--G~~vVsGg~~G--------iM~aa~~gAl~~GG~~iGVlP~e~~~-----~~~~~~~~~~~~~f~~Rk~ 113 (195)
T 1rcu_A 49 ELGRTLAKK--GYLVFNGGRDG--------VMELVSQGVREAGGTVVGILPDEEAG-----NPYLSVAVKTGLDFQMRSF 113 (195)
T ss_dssp HHHHHHHHT--TCEEEECCSSH--------HHHHHHHHHHHTTCCEEEEESTTCCC-----CTTCSEEEECCCCHHHHHH
T ss_pred HHHHHHHHC--CCEEEeCCHHH--------HHHHHHHHHHHcCCcEEEEeCCcccC-----CCCcceeeecCCCHHHHHH
Confidence 444455543 56777744333 46666666655555555555442111 111334443 2333 333
Q ss_pred hhcCCCccE-EEecCChhhHHH---HHHcCCCeEeccc
Q psy16939 99 ILAHPNLRL-FITHGGISSLME---ASSLGVPVLGVPF 132 (174)
Q Consensus 99 ~l~~~~~~~-~I~hgG~~t~~e---al~~g~P~i~vP~ 132 (174)
++. ..+|+ ++--||.||+-| ++.+++|+++++.
T Consensus 114 ~m~-~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 114 VLL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHH-HhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 333 34554 445788888766 4779999999963
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.94 E-value=0.05 Score=41.51 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CC---ccccccCCCCCEEEeecCC---chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-ND---PVLNAKTLPDNVFIQKWYP---QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~---~~~~~~~~~~nv~~~~~~p---~~~~l~~~~ 104 (174)
++.|.+..|+......++.+.+.++++.|.+.++++++..++. +. .++.+ .. +++.+.+-.+ ...++ ..
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~-~~-~~~~l~g~~sl~el~ali--~~ 253 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAE-GF-AYVEVLPKMSLEGVARVL--AG 253 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHT-TC-TTEEECCCCCHHHHHHHH--HT
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHh-hC-CcccccCCCCHHHHHHHH--Hh
Confidence 5789999988765556888999999999877777877754432 21 11111 12 2444444333 33455 67
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchHHHHHHHHHHcCc-eeEec-----CCCCCHHHHHHHHHHhhcC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQYRNMVLLRHRGY-ALIEP-----IQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~~na~~l~~~G~-g~~l~-----~~~~~~~~l~~al~~ll~~ 172 (174)
||++|+.-.. +++=|.+.|+|++.+ |..... ++- .|- ...+. -++.+++++.+++++++++
T Consensus 254 a~l~I~~DSG-~~HlAaa~g~P~v~lfg~t~p~~--~~P----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 254 AKFVVSVDTG-LSHLTAALDRPNITVYGPTDPGL--IGG----YGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp CSEEEEESSH-HHHHHHHTTCCEEEEESSSCHHH--HCC----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred CCEEEecCCc-HHHHHHHcCCCEEEEECCCChhh--cCC----CCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9999999543 344466799999998 432221 100 111 11121 2357899999999999875
No 59
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=94.06 E-value=0.38 Score=34.91 Aligned_cols=135 Identities=10% Similarity=0.023 Sum_probs=72.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~~ 99 (174)
.++-+++... +..+|+.|+.. .++....++....+-+++=.......+. ... +.-.++.+..+++....
T Consensus 31 ~~lg~~LA~~--g~~lV~GGg~~-------GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~-~~~~~~~~~~~~~~Rk~ 100 (216)
T 1ydh_A 31 IELGNELVKR--KIDLVYGGGSV-------GLMGLISRRVYEGGLHVLGIIPKALMPIEISG-ETVGDVRVVADMHERKA 100 (216)
T ss_dssp HHHHHHHHHT--TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCS-SCCSEEEEESSHHHHHH
T ss_pred HHHHHHHHHC--CCEEEECCCcc-------cHhHHHHHHHHHcCCcEEEEechhcCcccccc-CCCCcccccCCHHHHHH
Confidence 3455555554 57778877652 2467777776666666555443211110 000 11223555555543332
Q ss_pred hcCCCccEE-EecCChhhHHHHH---------HcCCCeEeccc--cchHHH-HHHHHHHcCce-------eEecCCCCCH
Q psy16939 100 LAHPNLRLF-ITHGGISSLMEAS---------SLGVPVLGVPF--FGDQYR-NMVLLRHRGYA-------LIEPIQTLTK 159 (174)
Q Consensus 100 l~~~~~~~~-I~hgG~~t~~eal---------~~g~P~i~vP~--~~dQ~~-na~~l~~~G~g-------~~l~~~~~~~ 159 (174)
+....+|++ +--||.||+-|.. .+++|++++-. +++... .-..+.+.|.- +.+. -++
T Consensus 101 ~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~---d~~ 177 (216)
T 1ydh_A 101 AMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSA---PTA 177 (216)
T ss_dssp HHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEE---SSH
T ss_pred HHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEe---CCH
Confidence 211345555 5578899988876 47999999953 333322 22445555541 1221 167
Q ss_pred HHHHHHHHH
Q psy16939 160 QSFLKNAQT 168 (174)
Q Consensus 160 ~~l~~al~~ 168 (174)
+++.+.+++
T Consensus 178 ee~~~~l~~ 186 (216)
T 1ydh_A 178 KELMEKMEE 186 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777764
No 60
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=93.23 E-value=1.2 Score=32.38 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=63.6
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE---ecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK---IDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~---~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
++-+++... +..+|+.|..+ .+....++....+-+++-. ...++.. . ..-......++++...
T Consensus 60 ~lg~~La~~--g~~lVsGGg~G--------iM~aa~~gAl~~gG~~iGV~~~~P~~~~~---~-~~~t~~~~~~~f~~Rk 125 (217)
T 1wek_A 60 RLGRALAEA--GFGVVTGGGPG--------VMEAVNRGAYEAGGVSVGLNIELPHEQKP---N-PYQTHALSLRYFFVRK 125 (217)
T ss_dssp HHHHHHHHH--TCEEEECSCSH--------HHHHHHHHHHHTTCCEEEEEECCTTCCCC---C-SCCSEEEEESCHHHHH
T ss_pred HHHHHHHHC--CCEEEeCChhh--------HHHHHHHHHHHcCCCEEEEeeCCcchhhc---c-ccCCcCcccCCHHHHH
Confidence 444445443 57777777643 3556666555555444433 2211111 0 1112223344444333
Q ss_pred -hhcCCCccEE-EecCChhhHHHHHH----------cCCCeEeccc-cchHH-HHHHHHHHcCce-------eEecCCCC
Q psy16939 99 -ILAHPNLRLF-ITHGGISSLMEASS----------LGVPVLGVPF-FGDQY-RNMVLLRHRGYA-------LIEPIQTL 157 (174)
Q Consensus 99 -~l~~~~~~~~-I~hgG~~t~~eal~----------~g~P~i~vP~-~~dQ~-~na~~l~~~G~g-------~~l~~~~~ 157 (174)
++. ..+|.+ +--||.||+-|... +++|++++-. ++|.. .+-..+.+.|.- +.+. -
T Consensus 126 ~~m~-~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~---~ 201 (217)
T 1wek_A 126 VLFV-RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKAVGPEDLQLFRLT---D 201 (217)
T ss_dssp HHHH-HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTSSCTTGGGGSEEE---S
T ss_pred HHHH-HhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccchhHHHHHHHHHHCCCCCHHHcCeEEEe---C
Confidence 232 446655 45788999887643 4799999853 11111 112444455532 1111 1
Q ss_pred CHHHHHHHHHH
Q psy16939 158 TKQSFLKNAQT 168 (174)
Q Consensus 158 ~~~~l~~al~~ 168 (174)
+++++.+.+++
T Consensus 202 ~~~e~~~~l~~ 212 (217)
T 1wek_A 202 EPEEVVQALKA 212 (217)
T ss_dssp CHHHHHHHHHC
T ss_pred CHHHHHHHHHH
Confidence 67777777654
No 61
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=93.07 E-value=1.1 Score=31.86 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=59.1
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchhhh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~~l 100 (174)
++-+++... +..+|+.|+.. .+++...++....+-+++=........+ ... ..-......+++.....+
T Consensus 35 ~lg~~la~~--g~~lv~GGG~~-------GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~-~~~~~~i~~~~~~~Rk~~ 104 (189)
T 3sbx_A 35 AVGAAIAAR--GWTLVWGGGHV-------SAMGAVSSAARAHGGWTVGVIPKMLVHRELAD-HDADELVVTETMWERKQV 104 (189)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBC-TTCSEEEEESSHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEcCchhhhcccCC-CCCCeeEEcCCHHHHHHH
Confidence 444455443 46667666541 2466667766666655554443311110 000 111334455554333222
Q ss_pred cCCCccEEE-ecCChhhHHHHHH---------cCCCeEeccc--cchHHH-HHHHHHHcCc
Q psy16939 101 AHPNLRLFI-THGGISSLMEASS---------LGVPVLGVPF--FGDQYR-NMVLLRHRGY 148 (174)
Q Consensus 101 ~~~~~~~~I-~hgG~~t~~eal~---------~g~P~i~vP~--~~dQ~~-na~~l~~~G~ 148 (174)
....+|++| --||.||+-|... +++|++++-. ++|... +-+.+.+.|.
T Consensus 105 m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gf 165 (189)
T 3sbx_A 105 MEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGY 165 (189)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTS
T ss_pred HHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCC
Confidence 224567665 5678999988752 5899999942 333322 2234555553
No 62
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=91.56 E-value=0.63 Score=33.34 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=49.4
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCCEEEeecCCchhhh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p~~~~l 100 (174)
++-+++.+. +..+|+.|+.. .++....++....+-+++=........ +... ..-....+.+++.....+
T Consensus 44 ~lg~~La~~--g~~lV~GGG~~-------GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~-~~~~~~i~~~~~~~Rk~~ 113 (199)
T 3qua_A 44 EVGSSIAAR--GWTLVSGGGNV-------SAMGAVAQAARAKGGHTVGVIPKALVHRELAD-VDAAELIVTDTMRERKRE 113 (199)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBC-TTSSEEEEESSHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEeCchhhhccccC-CCCCeeEEcCCHHHHHHH
Confidence 333444433 45556655431 135555665555555444433321101 0000 111345555554433222
Q ss_pred cCCCccEEE-ecCChhhHHHHHH---------cCCCeEecc
Q psy16939 101 AHPNLRLFI-THGGISSLMEASS---------LGVPVLGVP 131 (174)
Q Consensus 101 ~~~~~~~~I-~hgG~~t~~eal~---------~g~P~i~vP 131 (174)
....+|++| --||.||+-|... +++|++++-
T Consensus 114 m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 114 MEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 114466554 5788999888743 599999984
No 63
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=91.24 E-value=2.5 Score=29.85 Aligned_cols=135 Identities=9% Similarity=-0.020 Sum_probs=72.0
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~ 98 (174)
..++-+++... +..+|+.|+.. ..+....++....+-+++=........+ ... ..-.+....++++...
T Consensus 22 A~~lg~~La~~--g~~lV~GGg~~-------GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~-~~~~~~~~~~~~~~Rk 91 (191)
T 1t35_A 22 AAELGVYMAEQ--GIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVH-QNLTELIEVNGMHERK 91 (191)
T ss_dssp HHHHHHHHHHT--TCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTT-CCCSEEEEESHHHHHH
T ss_pred HHHHHHHHHHC--CCEEEECCCcc-------cHHHHHHHHHHHcCCeEEEEeCchhccccccc-CCCCccccCCCHHHHH
Confidence 34555566554 58888887652 2477777777666666665554322111 000 1123344455554333
Q ss_pred -hhcCCCccEE-EecCChhhHHHH---H------HcCCCeEeccc--cchHHH-HHHHHHHcCce-------eEecCCCC
Q psy16939 99 -ILAHPNLRLF-ITHGGISSLMEA---S------SLGVPVLGVPF--FGDQYR-NMVLLRHRGYA-------LIEPIQTL 157 (174)
Q Consensus 99 -~l~~~~~~~~-I~hgG~~t~~ea---l------~~g~P~i~vP~--~~dQ~~-na~~l~~~G~g-------~~l~~~~~ 157 (174)
++. ..+|.+ +--||.||+-|. + .+++|++++-. +.|... .-..+.+.|.- +.+. -
T Consensus 92 ~~~~-~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~---~ 167 (191)
T 1t35_A 92 AKMS-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSS---S 167 (191)
T ss_dssp HHHH-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEE---S
T ss_pred HHHH-HHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEe---C
Confidence 332 345554 557889998775 4 27899999953 233222 22345555521 2221 1
Q ss_pred CHHHHHHHHHH
Q psy16939 158 TKQSFLKNAQT 168 (174)
Q Consensus 158 ~~~~l~~al~~ 168 (174)
+++++.+.+++
T Consensus 168 ~~~e~~~~l~~ 178 (191)
T 1t35_A 168 RPDELIEQMQN 178 (191)
T ss_dssp SHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 67777777654
No 64
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.87 E-value=0.48 Score=38.98 Aligned_cols=97 Identities=8% Similarity=-0.023 Sum_probs=58.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-c---ccccCCCCCEEEeecCCchh---hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-V---LNAKTLPDNVFIQKWYPQTD---ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~---~~~~~~~~nv~~~~~~p~~~---~l~~~~ 104 (174)
+.++++..|..... ...+.+-+.+..+.+.+.++++...+.... . ......+.++.+....+... ++ ..
T Consensus 326 ~~p~i~~vgRl~~~--Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~ 401 (536)
T 3vue_A 326 KIPLIAFIGRLEEQ--KGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM--AG 401 (536)
T ss_dssp TSCEEEEECCBSGG--GCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH--HH
T ss_pred CCcEEEEEeecccc--CChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH--Hh
Confidence 45677778887542 133333333333444455666655443211 0 01114567888888877543 44 67
Q ss_pred ccEEEecC----ChhhHHHHHHcCCCeEeccc
Q psy16939 105 LRLFITHG----GISSLMEASSLGVPVLGVPF 132 (174)
Q Consensus 105 ~~~~I~hg----G~~t~~eal~~g~P~i~vP~ 132 (174)
||+++.-. =..+++||+++|+|+|+-..
T Consensus 402 aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~ 433 (536)
T 3vue_A 402 ADVLAVPSRFEPCGLIQLQGMRYGTPCACAST 433 (536)
T ss_dssp CSEEEECCSCCSSCSHHHHHHHTTCCEEECSC
T ss_pred hheeecccccCCCCHHHHHHHHcCCCEEEcCC
Confidence 99999752 23589999999999998643
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=88.39 E-value=0.46 Score=35.57 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=26.4
Q ss_pred CCccEEEecCChhhHHHHHHc------CCCeEeccc
Q psy16939 103 PNLRLFITHGGISSLMEASSL------GVPVLGVPF 132 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~------g~P~i~vP~ 132 (174)
..+|++|+=||-||+.+++.. ++|++.+|.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 468999999999999998764 889999975
No 66
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=88.29 E-value=1.7 Score=33.69 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=50.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEee-----------cC--C---
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQK-----------WY--P--- 95 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~-----------~~--p--- 95 (174)
+.|+++.|+.+. -..-...+++.|.+.+++++|......++. +.. ...-.++..+ ++ +
T Consensus 3 ~~i~i~~GGTgG----Hi~palala~~L~~~g~~V~~vg~~~g~e~~~v~-~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 77 (365)
T 3s2u_A 3 GNVLIMAGGTGG----HVFPALACAREFQARGYAVHWLGTPRGIENDLVP-KAGLPLHLIQVSGLRGKGLKSLVKAPLEL 77 (365)
T ss_dssp CEEEEECCSSHH----HHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG-GGTCCEEECC--------------CHHHH
T ss_pred CcEEEEcCCCHH----HHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh-hcCCcEEEEECCCcCCCCHHHHHHHHHHH
Confidence 456666654421 122356788889888999998875543221 000 0000111111 00 0
Q ss_pred ------chhhhcCCCccEEEecCChhhH---HHHHHcCCCeEec
Q psy16939 96 ------QTDILAHPNLRLFITHGGISSL---MEASSLGVPVLGV 130 (174)
Q Consensus 96 ------~~~~l~~~~~~~~I~hgG~~t~---~eal~~g~P~i~v 130 (174)
...++..-+-|++|++||+-+. ..|...|+|.++.
T Consensus 78 ~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 78 LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 0112322468999999998765 4567789999975
No 67
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=86.72 E-value=7.1 Score=28.11 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=65.3
Q ss_pred HHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchh-hh
Q psy16939 23 LQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTD-IL 100 (174)
Q Consensus 23 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~-~l 100 (174)
+-+++... +..+|+.|... ..+....++....+-+++=......... +.. .......+..+++... ++
T Consensus 37 lg~~LA~~--G~~vVsGGg~~-------GiM~aa~~gAl~~GG~tiGVlP~~~~~~e~~~-~~~~~~~~~~~f~~Rk~~~ 106 (215)
T 2a33_A 37 LGNELVSR--NIDLVYGGGSI-------GLMGLVSQAVHDGGRHVIGIIPKTLMPRELTG-ETVGEVRAVADMHQRKAEM 106 (215)
T ss_dssp HHHHHHHT--TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEESSCC---------CCEEEEESSHHHHHHHH
T ss_pred HHHHHHHC--CCEEEECCChh-------hHhHHHHHHHHHcCCcEEEEcchHhcchhhcc-CCCCceeecCCHHHHHHHH
Confidence 33444443 57777777641 1356666665556555554444322211 100 1112234455554333 22
Q ss_pred cCCCccEE-EecCChhhHHHHHH---------cCCCeEeccc--cchHHHH-HHHHHHcCce-------eEecCCCCCHH
Q psy16939 101 AHPNLRLF-ITHGGISSLMEASS---------LGVPVLGVPF--FGDQYRN-MVLLRHRGYA-------LIEPIQTLTKQ 160 (174)
Q Consensus 101 ~~~~~~~~-I~hgG~~t~~eal~---------~g~P~i~vP~--~~dQ~~n-a~~l~~~G~g-------~~l~~~~~~~~ 160 (174)
. ..+|.+ +--||.||+-|... +++|++++-. ++|...+ ...+.+.|.- +.+. -+++
T Consensus 107 ~-~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~---d~~e 182 (215)
T 2a33_A 107 A-KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSA---PTAK 182 (215)
T ss_dssp H-HTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEE---SSHH
T ss_pred H-HhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEe---CCHH
Confidence 2 345554 46888999988762 4899999853 3333222 2333444431 1111 1677
Q ss_pred HHHHHHHH
Q psy16939 161 SFLKNAQT 168 (174)
Q Consensus 161 ~l~~al~~ 168 (174)
++.+.+++
T Consensus 183 e~~~~l~~ 190 (215)
T 2a33_A 183 ELVKKLEE 190 (215)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 77777654
No 68
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=84.34 E-value=0.82 Score=33.92 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=38.6
Q ss_pred CCccEEEecCChhhHHHHHHc---CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITHGGISSLMEASSL---GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~---g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++|+=||-||+.+++.. ++|++.++. +. .|.-. ++.++++.++++.+++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~----------~Gfl~-----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR----------LGFLT-----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS----------CCSSC-----CBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC----------CCccC-----cCCHHHHHHHHHHHHcC
Confidence 468999999999999999876 889988873 21 12111 23566777777777654
No 69
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=82.56 E-value=5.6 Score=29.07 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=48.7
Q ss_pred CeEEEEcCCC----------cCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhc-
Q psy16939 33 GFVYMSFGSV----------VDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILA- 101 (174)
Q Consensus 33 ~~v~vs~Gs~----------~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~- 101 (174)
+.|+||.|+. .+ .-+..+-..+++++...|+.|++..++..+.. ..+.++.+.+.-.-.+++.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN--~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~~~~~v~s~~em~~~ 77 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITN--HSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNLSIREITNTKDLLIE 77 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEE--CCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTEEEEECCSHHHHHHH
T ss_pred CEEEEeCCCcccccCceeeccC--CCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCeEEEEHhHHHHHHHH
Confidence 6789999841 00 00123567788899999999999888755431 2245677777654332221
Q ss_pred ----CCCccEEEecCCh
Q psy16939 102 ----HPNLRLFITHGGI 114 (174)
Q Consensus 102 ----~~~~~~~I~hgG~ 114 (174)
.+.+|++|+.++.
T Consensus 78 v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 78 MQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHGGGCSEEEECSBC
T ss_pred HHHhcCCCCEEEEcCcc
Confidence 1579999999884
No 70
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=77.85 E-value=2.1 Score=31.12 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=25.7
Q ss_pred CCccEEEecCChhhHHHHHHcCCCeEeccccc
Q psy16939 103 PNLRLFITHGGISSLMEASSLGVPVLGVPFFG 134 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~ 134 (174)
..+|++|++||.......- ..+|+|-++..+
T Consensus 62 ~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 62 ERCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp SCCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 3599999999998888865 589999998744
No 71
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=77.60 E-value=2.8 Score=26.99 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=45.3
Q ss_pred CCccEEEecCChhh---------HHHHHHcCCCeEec-cccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 103 PNLRLFITHGGISS---------LMEASSLGVPVLGV-PFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 103 ~~~~~~I~hgG~~t---------~~eal~~g~P~i~v-P~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..++++|.-.|..| +-.|...|+|++++ |... + ..-..+++.+..++ .++.+.|.++|++.++
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~-~-~~P~~l~~~a~~iV----~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGL-E-NVPPELEAVSSEVV----GWNPHCIRDALEDALD 109 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSS-S-CCCTTHHHHCSEEE----CSCHHHHHHHHHHHHC
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCC-C-cCCHHHHhhCceec----cCCHHHHHHHHHhccC
Confidence 67899999999888 55677899999999 5433 2 12233555555554 3688999999988764
No 72
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=76.81 E-value=2.6 Score=29.19 Aligned_cols=98 Identities=17% Similarity=0.027 Sum_probs=51.6
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc--ccccCCCCCEEEeecCCchh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV--LNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~nv~~~~~~p~~~ 98 (174)
.++-+++.+. +..+|+.|..+ .+....++....+-+++=.....-++. ... ..-......++++...
T Consensus 23 ~~lg~~La~~--g~~lV~Ggg~G--------iM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~-~~~~~~~~~~~f~~Rk 91 (171)
T 1weh_A 23 VRYGEVLAEE--GFGLACGGYQG--------GMEALARGVKAKGGLVVGVTAPAFFPERRGPN-PFVDLELPAATLPQRI 91 (171)
T ss_dssp HHHHHHHHHT--TEEEEECCSST--------HHHHHHHHHHHTTCCEEECCCGGGCTTSCSSC-TTCSEECCCSSHHHHH
T ss_pred HHHHHHHHHC--CCEEEeCChhh--------HHHHHHHHHHHcCCcEEEEeccccCccccccc-CCCceeeecCCHHHHH
Confidence 4555566554 68899888764 366666666666666555433311111 000 0011112233343332
Q ss_pred -hhcCCCccEE-EecCChhhHHHH---HH-------cCCCeEecc
Q psy16939 99 -ILAHPNLRLF-ITHGGISSLMEA---SS-------LGVPVLGVP 131 (174)
Q Consensus 99 -~l~~~~~~~~-I~hgG~~t~~ea---l~-------~g~P~i~vP 131 (174)
++. ..+|.+ +--||.||+-|. +. +++| +++-
T Consensus 92 ~~~~-~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 92 GRLL-DLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp HHHH-HHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred HHHH-HhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 332 345554 457789997665 44 7899 7774
No 73
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=76.35 E-value=16 Score=29.44 Aligned_cols=28 Identities=21% Similarity=0.163 Sum_probs=20.6
Q ss_pred CCccEE-EecCChhhHHHHHH------------cCCCeEec
Q psy16939 103 PNLRLF-ITHGGISSLMEASS------------LGVPVLGV 130 (174)
Q Consensus 103 ~~~~~~-I~hgG~~t~~eal~------------~g~P~i~v 130 (174)
..+|+| +--||.||+-|... +++|++++
T Consensus 244 ~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 244 RCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred HhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEE
Confidence 346655 45788999988732 58999999
No 74
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=74.61 E-value=2.4 Score=31.77 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHc----C
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSL----G 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~----g 124 (174)
..+...++.+.|.+.+..+.+...... .+ ..+. . ........- ..+|++|+-||-||+.+++.. +
T Consensus 19 ~~~~~~~i~~~l~~~g~~v~~~~~~~~--~~---~~~~-~---~~~~~~~~~--~~~D~vi~~GGDGT~l~a~~~~~~~~ 87 (292)
T 2an1_A 19 ALTTHEMLYRWLCDQGYEVIVEQQIAH--EL---QLKN-V---PTGTLAEIG--QQADLAVVVGGDGNMLGAARTLARYD 87 (292)
T ss_dssp --CHHHHHHHHHHHTTCEEEEEHHHHH--HT---TCSS-C---CEECHHHHH--HHCSEEEECSCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhh--hc---cccc-c---cccchhhcc--cCCCEEEEEcCcHHHHHHHHHhhcCC
Confidence 345688889999988887665432110 00 0000 0 001122222 468999999999999999743 7
Q ss_pred CCeEeccc
Q psy16939 125 VPVLGVPF 132 (174)
Q Consensus 125 ~P~i~vP~ 132 (174)
+|++.++.
T Consensus 88 ~P~lGI~~ 95 (292)
T 2an1_A 88 INVIGINR 95 (292)
T ss_dssp CEEEEBCS
T ss_pred CCEEEEEC
Confidence 89999973
No 75
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=73.56 E-value=4.9 Score=32.58 Aligned_cols=75 Identities=11% Similarity=0.105 Sum_probs=50.1
Q ss_pred EE-EeecCCchhhhcC-CCccEEEecC---Ch-hhHHHHHHcCC-----CeEeccccc--hHHHHHHHHHHcCceeEecC
Q psy16939 88 VF-IQKWYPQTDILAH-PNLRLFITHG---GI-SSLMEASSLGV-----PVLGVPFFG--DQYRNMVLLRHRGYALIEPI 154 (174)
Q Consensus 88 v~-~~~~~p~~~~l~~-~~~~~~I~hg---G~-~t~~eal~~g~-----P~i~vP~~~--dQ~~na~~l~~~G~g~~l~~ 154 (174)
+. +.+++++.++.++ ..||+++.-. |+ .++.||+++|+ |+|+-...+ ++. .-|+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv~p 403 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIVNP 403 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEECT
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEECC
Confidence 44 4577887664322 7899999743 33 47899999998 555433322 332 14677755
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
. +.+++.++|.++|+++
T Consensus 404 ~--d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 404 Y--DRDEVAAALDRALTMS 420 (482)
T ss_dssp T--CHHHHHHHHHHHHTCC
T ss_pred C--CHHHHHHHHHHHHcCC
Confidence 3 6899999999999753
No 76
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=72.33 E-value=0.71 Score=31.58 Aligned_cols=126 Identities=8% Similarity=0.008 Sum_probs=64.2
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEE-EecCCCCccccccCCCCCEEEeec--C--CchhhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFW-KIDITNDPVLNAKTLPDNVFIQKW--Y--PQTDILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~-~~~~~~~~~~~~~~~~~nv~~~~~--~--p~~~~l~~~~~~~ 107 (174)
..||++..-... ......++++.+.|++.+ .|+- -.+...+. ...... ...+ + .....+ ..||+
T Consensus 3 mkIYlAGP~f~~--~e~~~~~~~i~~~L~~~G-~Vl~~hv~~~~l~-----~~g~~~-~~~~~~i~~~d~~~i--~~aD~ 71 (152)
T 4fyk_A 3 RSVYFCGSIRGG--REDQALYARIVSRLRRYG-KVLTEHVADAELE-----PLGEEA-AGGDQFIHEQNLNWL--QQADV 71 (152)
T ss_dssp CEEEEECCSTTC--CTTHHHHHHHHHHHTTTS-EECCCC-------------------CCCHHHHHHHHHHHH--HHCSE
T ss_pred ceEEEECCCCCc--HHHHHHHHHHHHHHHHcC-cccccccCchhhh-----hccccc-cCCHHHHHHHHHHHH--HHCCE
Confidence 578887544332 124468899999999988 4321 11111111 000000 0011 1 122233 67888
Q ss_pred EEec---CChhhHHHH---HHcCCCeEeccccchHHHHHHHHHHcC--ceeE-ecCCCCCHHHHHHHHHHhhcC
Q psy16939 108 FITH---GGISSLMEA---SSLGVPVLGVPFFGDQYRNMVLLRHRG--YALI-EPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 108 ~I~h---gG~~t~~ea---l~~g~P~i~vP~~~dQ~~na~~l~~~G--~g~~-l~~~~~~~~~l~~al~~ll~~ 172 (174)
+|-- ...||..|. .+.|+|++++-.......-+..+.... .-+. ...++ ++|.+.|.+.+.+
T Consensus 72 vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~---~el~~il~~f~~~ 142 (152)
T 4fyk_A 72 VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE---GEVETMLDRYFEA 142 (152)
T ss_dssp EEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT---TCHHHHHHHHHC-
T ss_pred EEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH---HHHHHHHHHHHHh
Confidence 8875 468898885 788999999743222222333444432 2232 22332 7777777776643
No 77
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=71.71 E-value=2.3 Score=32.34 Aligned_cols=80 Identities=21% Similarity=0.237 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhhCCCcEEEEecCCC-Cc--cccccCCCC-CEEEeecCCch-hhhcCCCccEEEecCChhhHHHHHHc-
Q psy16939 50 EETKLGFLEVFKQLKLPIFWKIDITN-DP--VLNAKTLPD-NVFIQKWYPQT-DILAHPNLRLFITHGGISSLMEASSL- 123 (174)
Q Consensus 50 ~~~~~~i~~~l~~~~~~~i~~~~~~~-~~--~~~~~~~~~-nv~~~~~~p~~-~~l~~~~~~~~I~hgG~~t~~eal~~- 123 (174)
.+...++.+.|++.+..+.+...... .. ......... +... ...... ... ..+|++|+-||-||+.+++..
T Consensus 19 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~--~~~d~vi~~GGDGT~l~a~~~~ 95 (307)
T 1u0t_A 19 TETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEI-EVVDADQHAA--DGCELVLVLGGDGTFLRAAELA 95 (307)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEC--------------------------------------CCCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccc-cccccccccc--cCCCEEEEEeCCHHHHHHHHHh
Confidence 45688899999998887766432211 10 000000000 0000 111111 122 568999999999999999754
Q ss_pred ---CCCeEeccc
Q psy16939 124 ---GVPVLGVPF 132 (174)
Q Consensus 124 ---g~P~i~vP~ 132 (174)
++|++.++.
T Consensus 96 ~~~~~pvlgi~~ 107 (307)
T 1u0t_A 96 RNASIPVLGVNL 107 (307)
T ss_dssp HHHTCCEEEEEC
T ss_pred ccCCCCEEEEeC
Confidence 899999974
No 78
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=71.23 E-value=17 Score=26.40 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=47.0
Q ss_pred CCeEEEEcCCC----------cCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhc
Q psy16939 32 GGFVYMSFGSV----------VDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~----------~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~ 101 (174)
.+.|+||.|+. .. .-+..+-..+.+++...|+.|++..+...+. .+..+...+.-...+++.
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN--~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~------~~~g~~~~dv~~~~~~~~ 79 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISD--HSSGKMGFAIAAAAARRGANVTLVSGPVSLP------TPPFVKRVDVMTALEMEA 79 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEE--CCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------CCTTEEEEECCSHHHHHH
T ss_pred CCEEEEECCCCCcccCceeeccC--CCccHHHHHHHHHHHHCCCEEEEEECCcccc------cCCCCeEEccCcHHHHHH
Confidence 37899999951 00 0012457788889999999988877654332 234455555544332221
Q ss_pred -----CCCccEEEecCChh
Q psy16939 102 -----HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -----~~~~~~~I~hgG~~ 115 (174)
+..+|++|+.+|..
T Consensus 80 ~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 80 AVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHGGGCSEEEECCBCC
T ss_pred HHHHhcCCCCEEEECCccc
Confidence 25799999999853
No 79
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=70.00 E-value=14 Score=23.24 Aligned_cols=106 Identities=8% Similarity=0.000 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...|...++.+.......+..+... ..+..+.+.++ +|... | -.+.+.+.
T Consensus 15 ~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~d~~l~~~~--------------g-~~~~~~l~~~~~~ 78 (140)
T 3grc_A 15 DPDIARLLNLMLEKGGFDSDMVHSAAQALEQVA-RRPYAAMTVDLNLPDQD--------------G-VSLIRALRRDSRT 78 (140)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHH-HSCCSEEEECSCCSSSC--------------H-HHHHHHHHTSGGG
T ss_pred CHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHH-hCCCCEEEEeCCCCCCC--------------H-HHHHHHHHhCccc
Confidence 445566677777777877655433322111111 22345555554 22211 1 23344444
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|+|++....+.........+.|+--.+. +.++.++|..++++++.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPLAVSTWLE-KPIDENLLILSLHRAID 126 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTTCCCEEEC-SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhcCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 3678888865444333322344556655554 45689999999998875
No 80
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=69.59 E-value=13 Score=30.42 Aligned_cols=131 Identities=14% Similarity=0.000 Sum_probs=74.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC--cE-EEEec-CC--CCc---c----cccc--C-----CCCCEEEee
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL--PI-FWKID-IT--NDP---V----LNAK--T-----LPDNVFIQK 92 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~--~~-i~~~~-~~--~~~---~----~~~~--~-----~~~nv~~~~ 92 (174)
..++++.|...... .-...++++ ..+++.+. ++ +++++ +. ..+ + +.+. . ....+++..
T Consensus 281 ~~lIl~VgRLd~~K-Gi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g 358 (496)
T 3t5t_A 281 HRLVVHSGRTDPIK-NAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDN 358 (496)
T ss_dssp SEEEEEEEESSGGG-CHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ceEEEEcccCcccc-CHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeC
Confidence 56777788876532 234556666 66666553 22 33332 21 111 0 0000 0 011577778
Q ss_pred cCCchhhhcC-CCccEEEec---CChhh-HHHHHHcC---CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy16939 93 WYPQTDILAH-PNLRLFITH---GGISS-LMEASSLG---VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLK 164 (174)
Q Consensus 93 ~~p~~~~l~~-~~~~~~I~h---gG~~t-~~eal~~g---~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 164 (174)
.+++.++.+. ..||+++.- =|+|. ..|++++| .|.|+--..+- +..+. ..|+.+++. +.+++.+
T Consensus 359 ~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l~--~~allVnP~--D~~~lA~ 430 (496)
T 3t5t_A 359 DNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVLG--EYCRSVNPF--DLVEQAE 430 (496)
T ss_dssp CCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHHG--GGSEEECTT--BHHHHHH
T ss_pred CCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHhC--CCEEEECCC--CHHHHHH
Confidence 8877654332 779999875 46665 58999986 55544433221 11111 247888654 6899999
Q ss_pred HHHHhhcCC
Q psy16939 165 NAQTMLNDP 173 (174)
Q Consensus 165 al~~ll~~~ 173 (174)
+|.++|+++
T Consensus 431 AI~~aL~m~ 439 (496)
T 3t5t_A 431 AISAALAAG 439 (496)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHcCC
Confidence 999998765
No 81
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=68.58 E-value=7 Score=33.44 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=26.6
Q ss_pred hhhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccc
Q psy16939 98 DILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPF 132 (174)
Q Consensus 98 ~~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~ 132 (174)
+++ ..||++|.-. -..+..||+++|+|+|+--.
T Consensus 514 ~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 514 EFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp HHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred HHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 456 6799999764 45689999999999998754
No 82
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=66.38 E-value=22 Score=25.59 Aligned_cols=75 Identities=12% Similarity=-0.010 Sum_probs=41.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEee--cCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQK--WYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~--~~p~~~---~l~---- 101 (174)
.++++|+.||.+. -..+.+.|.+.+++++....... ..+..+ ....++.... ..+... ++.
T Consensus 7 ~k~~lVTGas~gI--------G~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 7 SRVFIVTGASSGL--------GAAVTRMLAQEGATVLGLDLKPPAGEEPAA-ELGAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp TCEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCChHHHHHHHH-HhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4789999988754 56677788888999887765433 221111 2223333332 222221 111
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 78 ~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 14799999999964
No 83
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=66.06 E-value=12 Score=26.33 Aligned_cols=30 Identities=10% Similarity=0.048 Sum_probs=23.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK 70 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~ 70 (174)
+++++|-+|+.. +..+.++|++.+..+.+.
T Consensus 3 ~~I~iiD~g~~n---------~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 3 QNVVIIDTGCAN---------ISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp CCEEEECCCCTT---------HHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEECCCCh---------HHHHHHHHHHCCCEEEEE
Confidence 468888888863 566788899999877663
No 84
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=65.70 E-value=6 Score=28.20 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=56.3
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
.+.+.+|+.... ++++||..+|... ...+.++.+.+++++.+..+.+..-....+ -...+
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~---~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~----------------~~~~~ 75 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVE---EVTFYVEAGKKALESLGLLVEELDIATESL----------------GEITT 75 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGC---SCCHHHHHHHHHHHHTTCEEEECCTTTSCH----------------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCC---CHHHHHHHHHHHHHHcCCeEEEEEecCCCh----------------HHHHH
Confidence 445677764444 6889998887643 245678999999999998765531000000 00012
Q ss_pred hhcCCCccEEEecCCh--------------hhHHHHHHcCCCeEecc
Q psy16939 99 ILAHPNLRLFITHGGI--------------SSLMEASSLGVPVLGVP 131 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~--------------~t~~eal~~g~P~i~vP 131 (174)
.+ .++|.++--||. ..+.|.+..|+|.+.+-
T Consensus 76 ~l--~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 76 KL--RKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp HH--HHSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred HH--HhCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 34 457888877762 23455666799998875
No 85
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=63.29 E-value=21 Score=26.05 Aligned_cols=70 Identities=9% Similarity=0.079 Sum_probs=40.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh---hc-----CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI---LA-----HP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~---l~-----~~ 103 (174)
.++|+|+.||.+. -..+.+.|.+.+.+++......... .........+..+...+ +. +.
T Consensus 14 ~k~vlVTGas~GI--------G~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 14 DKVAIVTGGSSGI--------GLAVVDALVRYGAKVVSVSLDEKSD-----VNVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TCEEEESSTTSHH--------HHHHHHHHHHTTCEEEEEESCC--C-----TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCCchhc-----cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5889999988764 5567777888899887766543211 11111122222222211 11 14
Q ss_pred CccEEEecCCh
Q psy16939 104 NLRLFITHGGI 114 (174)
Q Consensus 104 ~~~~~I~hgG~ 114 (174)
..|++|+.+|.
T Consensus 81 ~iD~lv~nAg~ 91 (269)
T 3vtz_A 81 RIDILVNNAGI 91 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999999995
No 86
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=62.35 E-value=38 Score=24.44 Aligned_cols=70 Identities=7% Similarity=0.087 Sum_probs=42.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee--cCCchh---hhc-----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK--WYPQTD---ILA----- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~~---~l~----- 101 (174)
.++++|+.|+.+. -..+.+.|.+.+++++......... ...++.... ..+... ++.
T Consensus 28 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 28 QKVVVITGASQGI--------GAGLVRAYRDRNYRVVATSRSIKPS------ADPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp CCEEEESSCSSHH--------HHHHHHHHHHTTCEEEEEESSCCCC------SSTTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCChhhc------ccCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999888754 4567777888899988876643321 112333332 222211 111
Q ss_pred CCCccEEEecCChh
Q psy16939 102 HPNLRLFITHGGIS 115 (174)
Q Consensus 102 ~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 94 ~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 94 FGRIDSLVNNAGVF 107 (260)
T ss_dssp HSCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 14799999999863
No 87
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=62.00 E-value=5.6 Score=28.10 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=29.6
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHH
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~ 141 (174)
...+|++|++||.......- ..+|++-+|..+--...|.
T Consensus 49 ~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al 87 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAV 87 (196)
T ss_dssp TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHH
T ss_pred cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHH
Confidence 36799999999988888865 5899999987553333333
No 88
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=60.46 E-value=25 Score=25.27 Aligned_cols=86 Identities=15% Similarity=0.204 Sum_probs=55.7
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
.+.+.+|+... +++++|..++... .....+..+.+++++.+..+....-. . +..+.
T Consensus 21 ~~~l~~~~~~~-~~i~iI~~a~~~~---~~~~~~~~~~~al~~lG~~~~~v~~~---~-----------------d~~~~ 76 (229)
T 1fy2_A 21 LPLIANQLNGR-RSAVFIPFAGVTQ---TWDEYTDKTAEVLAPLGVNVTGIHRV---A-----------------DPLAA 76 (229)
T ss_dssp HHHHHHHHTTC-CEEEEECTTCCSS---CHHHHHHHHHHHHGGGTCEEEETTSS---S-----------------CHHHH
T ss_pred HHHHHHHhcCC-CeEEEEECCCCCC---CHHHHHHHHHHHHHHCCCEEEEEecc---c-----------------cHHHH
Confidence 55678888643 5899999987432 25677889999999988765442110 0 11133
Q ss_pred hcCCCccEEEecCChhh--------------HHHHHHcCCCeEecc
Q psy16939 100 LAHPNLRLFITHGGISS--------------LMEASSLGVPVLGVP 131 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t--------------~~eal~~g~P~i~vP 131 (174)
+ .++|.++--||..+ +.|.+..|+|++.+-
T Consensus 77 l--~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 77 I--EKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp H--HHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred H--hcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 4 45788888887433 345566899998875
No 89
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=60.44 E-value=14 Score=28.80 Aligned_cols=96 Identities=10% Similarity=0.027 Sum_probs=51.0
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCH--HHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSE--ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT 97 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~--~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 97 (174)
+++.+++...+ +++++|+-++... . ...+++.+.|++.+..+....+...-+. ...+ ..-.
T Consensus 22 ~~l~~~l~~~g~~~~livtd~~~~~-----~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~---------~~~v--~~~~ 85 (387)
T 3bfj_A 22 SVVGERCQLLGGKKALLVTDKGLRA-----IKDGAVDKTLHYLREAGIEVAIFDGVEPNPK---------DTNV--RDGL 85 (387)
T ss_dssp GGHHHHHHHTTCSEEEEECCTTTC-------CCSSHHHHHHHHHHTTCEEEEECCCCSSCB---------HHHH--HHHH
T ss_pred HHHHHHHHHcCCCEEEEEECcchhh-----ccchHHHHHHHHHHHcCCeEEEECCccCCCC---------HHHH--HHHH
Confidence 44666665544 4566665544422 2 3578888888887776544322111110 0000 0011
Q ss_pred hhhcCCCccEEEecCChhhHHHH---HH--------------------cCCCeEecccc
Q psy16939 98 DILAHPNLRLFITHGGISSLMEA---SS--------------------LGVPVLGVPFF 133 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~ea---l~--------------------~g~P~i~vP~~ 133 (174)
..+....+|++|.=||. ++.++ ++ .|+|++.||..
T Consensus 86 ~~~~~~~~d~IIavGGG-sv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT 143 (387)
T 3bfj_A 86 AVFRREQCDIIVTVGGG-SPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTT 143 (387)
T ss_dssp HHHHHTTCCEEEEEESH-HHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECS
T ss_pred HHHHhcCCCEEEEeCCc-chhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCC
Confidence 11222568999998884 44443 21 38999999973
No 90
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=59.83 E-value=15 Score=27.47 Aligned_cols=55 Identities=16% Similarity=0.269 Sum_probs=39.7
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHc--C-CCeEe
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSL--G-VPVLG 129 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~--g-~P~i~ 129 (174)
.+++.+.|++.+..+.+... .. . .+ ..+|++|+=||-||+..+... + +|++.
T Consensus 42 ~~~l~~~L~~~g~~v~~~~~---~~-----~---------------~~--~~~DlvIvlGGDGT~L~aa~~~~~~~PilG 96 (278)
T 1z0s_A 42 VKRIEEALKRLEVEVELFNQ---PS-----E---------------EL--ENFDFIVSVGGDGTILRILQKLKRCPPIFG 96 (278)
T ss_dssp HHHHHHHHHHTTCEEEEESS---CC-----G---------------GG--GGSSEEEEEECHHHHHHHHTTCSSCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEccc---cc-----c---------------cc--CCCCEEEEECCCHHHHHHHHHhCCCCcEEE
Confidence 77888888888887655221 11 0 12 369999999999999998754 3 78888
Q ss_pred ccc
Q psy16939 130 VPF 132 (174)
Q Consensus 130 vP~ 132 (174)
+..
T Consensus 97 IN~ 99 (278)
T 1z0s_A 97 INT 99 (278)
T ss_dssp EEC
T ss_pred ECC
Confidence 864
No 91
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=58.60 E-value=48 Score=24.24 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEE-eecCCchh--------hhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFI-QKWYPQTD--------ILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~-~~~~p~~~--------~l~~ 102 (174)
.++++|+.||.+. -.++...|.+.|.+++....... + ..++.+.+ .+-.+..+ .-.+
T Consensus 11 GK~alVTGas~GI--------G~aia~~la~~Ga~V~~~~r~~~-~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 11 GKRALITAGTKGA--------GAATVSLFLELGAQVLTTARARP-E-----GLPEELFVEADLTTKEGCAIVAEATRQRL 76 (261)
T ss_dssp TCEEEESCCSSHH--------HHHHHHHHHHTTCEEEEEESSCC-T-----TSCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEeccCcHH--------HHHHHHHHHHcCCEEEEEECCch-h-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3799999988864 56788888999999888765432 1 11222222 22222111 1113
Q ss_pred CCccEEEecCChh
Q psy16939 103 PNLRLFITHGGIS 115 (174)
Q Consensus 103 ~~~~~~I~hgG~~ 115 (174)
...|++|+.+|..
T Consensus 77 G~iDilVnnAG~~ 89 (261)
T 4h15_A 77 GGVDVIVHMLGGS 89 (261)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 6799999998853
No 92
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=58.53 E-value=11 Score=29.26 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=49.8
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhc
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILA 101 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~ 101 (174)
++.+++...++++++|+-.+... .....+++.+.|++.+..+....+...-+.+. .. ..-.+.+.
T Consensus 31 ~l~~~l~~~g~~~liVtd~~~~~----~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~--~v---------~~~~~~~~ 95 (371)
T 1o2d_A 31 KRGNIIDLLGKRALVVTGKSSSK----KNGSLDDLKKLLDETEISYEIFDEVEENPSFD--NV---------MKAVERYR 95 (371)
T ss_dssp HHGGGGGGTCSEEEEEEESSGGG----TSSHHHHHHHHHHHTTCEEEEEEEECSSCBHH--HH---------HHHHHHHT
T ss_pred HHHHHHHHcCCEEEEEECchHHh----hccHHHHHHHHHHHcCCeEEEeCCccCCCCHH--HH---------HHHHHHHH
Confidence 34444443344566666553322 12357788888887777654332211111000 00 00011222
Q ss_pred CCCccEEEecCChhhHHHH------H-H----------------cCCCeEecccc
Q psy16939 102 HPNLRLFITHGGISSLMEA------S-S----------------LGVPVLGVPFF 133 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~ea------l-~----------------~g~P~i~vP~~ 133 (174)
..++|++|.=||. ++.++ + . .|+|++.||..
T Consensus 96 ~~~~d~IIavGGG-sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT 149 (371)
T 1o2d_A 96 NDSFDFVVGLGGG-SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTT 149 (371)
T ss_dssp TSCCSEEEEEESH-HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECS
T ss_pred hcCCCEEEEeCCh-HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCC
Confidence 2478999998884 44443 1 1 48999999975
No 93
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=58.48 E-value=19 Score=27.68 Aligned_cols=93 Identities=13% Similarity=0.009 Sum_probs=53.3
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
-+++.+++.... +++++|+-.+. .....+++.+.|+..+..+.+........ ...+.-. +
T Consensus 22 ~~~l~~~l~~~g~~~~livtd~~~------~~~~~~~v~~~L~~~g~~~~~~~~~~~~~----------~~~v~~~---~ 82 (354)
T 3ce9_A 22 IYNIGQIIKKGNFKRVSLYFGEGI------YELFGETIEKSIKSSNIEIEAVETVKNID----------FDEIGTN---A 82 (354)
T ss_dssp GGGHHHHHGGGTCSEEEEEEETTH------HHHHHHHHHHHHHTTTCEEEEEEEECCCB----------HHHHHHH---H
T ss_pred HHHHHHHHHhcCCCeEEEEECccH------HHHHHHHHHHHHHHcCCeEEEEecCCCCC----------HHHHHHH---H
Confidence 345667776554 45666664443 23467888888888777654433211100 0000001 2
Q ss_pred hhcCCCccEEEecCChhhHHHH-----HHcCCCeEeccc
Q psy16939 99 ILAHPNLRLFITHGGISSLMEA-----SSLGVPVLGVPF 132 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~~t~~ea-----l~~g~P~i~vP~ 132 (174)
.+...++|++|.=||. ++.++ ...|+|.+.||.
T Consensus 83 ~~~~~~~d~IIavGGG-sv~D~aK~vA~~~~~p~i~IPT 120 (354)
T 3ce9_A 83 FKIPAEVDALIGIGGG-KAIDAVKYMAFLRKLPFISVPT 120 (354)
T ss_dssp TTSCTTCCEEEEEESH-HHHHHHHHHHHHHTCCEEEEES
T ss_pred HhhhcCCCEEEEECCh-HHHHHHHHHHhhcCCCEEEecC
Confidence 2222578999998884 55544 346999999997
No 94
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=57.84 E-value=7.1 Score=29.41 Aligned_cols=67 Identities=9% Similarity=0.105 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH------c
Q psy16939 50 EETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS------L 123 (174)
Q Consensus 50 ~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~------~ 123 (174)
.+...++...|+..+..+.+......-... .. . .++. ...|.+|.-||-||+.|.+. .
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~---~~---------~--~~~~--~~~d~vv~~GGDGTl~~v~~~l~~~~~ 88 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKEQGDAT---KY---------C--QEFA--SKVDLIIVFGGDGTVFECTNGLAPLEI 88 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCSTTHHH---HH---------H--HHHT--TTCSEEEEEECHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccCcchHH---HH---------H--HHhh--cCCCEEEEEccchHHHHHHHHHhhCCC
Confidence 466788888888887766554332111100 00 0 1111 46899999999999999865 5
Q ss_pred CCCeEeccc
Q psy16939 124 GVPVLGVPF 132 (174)
Q Consensus 124 g~P~i~vP~ 132 (174)
++|+.++|.
T Consensus 89 ~~~l~iiP~ 97 (304)
T 3s40_A 89 RPTLAIIPG 97 (304)
T ss_dssp CCEEEEEEC
T ss_pred CCcEEEecC
Confidence 689999996
No 95
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.54 E-value=32 Score=23.85 Aligned_cols=69 Identities=6% Similarity=-0.096 Sum_probs=41.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee--cCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK--WYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~---~~l~~~~~~~ 107 (174)
+.|+|+.||... -..+++.|.+.+++++...+...... ....++.+.. ..+.. ..+ ..+|+
T Consensus 5 ~~ilItGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~ 70 (227)
T 3dhn_A 5 KKIVLIGASGFV--------GSALLNEALNRGFEVTAVVRHPEKIK----IENEHLKVKKADVSSLDEVCEVC--KGADA 70 (227)
T ss_dssp CEEEEETCCHHH--------HHHHHHHHHTTTCEEEEECSCGGGCC----CCCTTEEEECCCTTCHHHHHHHH--TTCSE
T ss_pred CEEEEEcCCchH--------HHHHHHHHHHCCCEEEEEEcCcccch----hccCceEEEEecCCCHHHHHHHh--cCCCE
Confidence 568888877643 45667777777888777765432111 2234555443 23322 344 57999
Q ss_pred EEecCChh
Q psy16939 108 FITHGGIS 115 (174)
Q Consensus 108 ~I~hgG~~ 115 (174)
+|+-+|..
T Consensus 71 vi~~a~~~ 78 (227)
T 3dhn_A 71 VISAFNPG 78 (227)
T ss_dssp EEECCCC-
T ss_pred EEEeCcCC
Confidence 99998864
No 96
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=57.00 E-value=34 Score=24.44 Aligned_cols=70 Identities=10% Similarity=0.009 Sum_probs=41.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh---hhc-----CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD---ILA-----HP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---~l~-----~~ 103 (174)
.++++|+.||... -..+.+.|.+.+++++......... ...-.....+..+... ++. +.
T Consensus 7 ~k~vlVTGas~gi--------G~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 7 GKNVWVTGAGKGI--------GYATALAFVEAGAKVTGFDQAFTQE-----QYPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TCEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESCCCSS-----CCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEeCchhhh-----cCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999888753 4567777778899888776544322 2221112222222221 111 14
Q ss_pred CccEEEecCCh
Q psy16939 104 NLRLFITHGGI 114 (174)
Q Consensus 104 ~~~~~I~hgG~ 114 (174)
..|++|+.+|.
T Consensus 74 ~id~lv~~Ag~ 84 (250)
T 2fwm_X 74 RLDALVNAAGI 84 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999999986
No 97
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=56.64 E-value=37 Score=23.46 Aligned_cols=84 Identities=21% Similarity=0.264 Sum_probs=45.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCCCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~ 110 (174)
+|.|.|-+||.. .....++....|+..+..+-+.+-+ .+.++- +..|... .....++++|.
T Consensus 6 ~~~V~IimgS~S-----D~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~----------~~~~~~~---a~~~g~~ViIa 67 (169)
T 3trh_A 6 KIFVAILMGSDS-----DLSTMETAFTELKSLGIPFEAHILSAHRTPKE----------TVEFVEN---ADNRGCAVFIA 67 (169)
T ss_dssp CCEEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHH----------HHHHHHH---HHHTTEEEEEE
T ss_pred CCcEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEcccCCHHH----------HHHHHHH---HHhCCCcEEEE
Confidence 466777777764 4778999999999998765444333 333310 0001100 00134667777
Q ss_pred cCChhhHHHHH---HcCCCeEecccc
Q psy16939 111 HGGISSLMEAS---SLGVPVLGVPFF 133 (174)
Q Consensus 111 hgG~~t~~eal---~~g~P~i~vP~~ 133 (174)
-+|...-.-.+ ..-+|+|.+|..
T Consensus 68 ~AG~aa~LpgvvA~~t~~PVIgVP~~ 93 (169)
T 3trh_A 68 AAGLAAHLAGTIAAHTLKPVIGVPMA 93 (169)
T ss_dssp EECSSCCHHHHHHHTCSSCEEEEECC
T ss_pred ECChhhhhHHHHHhcCCCCEEEeecC
Confidence 66643322222 235788888763
No 98
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=56.61 E-value=23 Score=24.53 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+|.|.|-+||.. .....++....|+..+.++-+.+-
T Consensus 11 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~ 46 (170)
T 1xmp_A 11 KSLVGVIMGSTS-----DWETMKYACDILDELNIPYEKKVV 46 (170)
T ss_dssp CCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEE
Confidence 688888888875 578899999999999886554443
No 99
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=56.60 E-value=40 Score=23.00 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=23.1
Q ss_pred CCccEEEe--cC---ChhhHHHH---HHcCCCeEec
Q psy16939 103 PNLRLFIT--HG---GISSLMEA---SSLGVPVLGV 130 (174)
Q Consensus 103 ~~~~~~I~--hg---G~~t~~ea---l~~g~P~i~v 130 (174)
..||++|- .| ..||..|. .+.|+|++++
T Consensus 68 ~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~ 103 (162)
T 3ehd_A 68 LASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVAL 103 (162)
T ss_dssp HTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 67999887 44 48999985 8899999998
No 100
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=56.57 E-value=11 Score=25.73 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=48.7
Q ss_pred CCeEEEEcCCCcCCCCCC-HHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecC--CchhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLS-EETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY--PQTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~-~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~--p~~~~l~~~~~~~~ 108 (174)
++.+|+ .|..... .. .+..+++.+.|++.|..+++ + ... ..+ ....+ .....+ .+||++
T Consensus 10 ~~~~y~-a~~~F~~--~e~~~~~~~l~~~l~~~G~~v~~--P-~~~------~~~----~~~~i~~~d~~~i--~~aD~v 71 (161)
T 2f62_A 10 RKIYIA-GPAVFNP--DMGASYYNKVRELLKKENVMPLI--P-TDN------EAT----EALDIRQKNIQMI--KDCDAV 71 (161)
T ss_dssp CEEEEE-SGGGGST--TTTHHHHHHHHHHHHTTTCEEEC--T-TTT------CCS----SHHHHHHHHHHHH--HHCSEE
T ss_pred hceEEE-ECCCCCH--HHHHHHHHHHHHHHHHCCCEEEC--C-Ccc------Ccc----hHHHHHHHHHHHH--HhCCEE
Confidence 344444 4444432 35 78899999999988875433 2 111 111 00111 112334 678888
Q ss_pred Eec--------CChhhHHHH---HHcCCCeEecc
Q psy16939 109 ITH--------GGISSLMEA---SSLGVPVLGVP 131 (174)
Q Consensus 109 I~h--------gG~~t~~ea---l~~g~P~i~vP 131 (174)
|-- ...||..|. .+.|||++++-
T Consensus 72 VA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 72 IADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp EEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 766 358899985 78999999984
No 101
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=56.34 E-value=3.6 Score=32.30 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=52.2
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
+++.+++...+ +++++|+-++.. .....+++.+.|++.+..+.+..+...-+.. ..+ ..-.+.
T Consensus 20 ~~l~~~~~~~g~~~~liVtd~~~~-----~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~---------~~v--~~~~~~ 83 (383)
T 3ox4_A 20 EKAIKDLNGSGFKNALIVSDAFMN-----KSGVVKQVADLLKAQGINSAVYDGVMPNPTV---------TAV--LEGLKI 83 (383)
T ss_dssp HHHHHTTTTSCCCEEEEEEEHHHH-----HTTHHHHHHHHHHTTTCEEEEEEEECSSCBH---------HHH--HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCchh-----hCchHHHHHHHHHHcCCeEEEECCccCCCCH---------HHH--HHHHHH
Confidence 34555555555 566666654432 1236788889998888766443221111100 000 000111
Q ss_pred hcCCCccEEEecCChhhHHHH-----HHc------------------CCCeEecccc
Q psy16939 100 LAHPNLRLFITHGGISSLMEA-----SSL------------------GVPVLGVPFF 133 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~ea-----l~~------------------g~P~i~vP~~ 133 (174)
+....+|++|.=||. ++.++ +.. ++|++.||..
T Consensus 84 ~~~~~~D~IIavGGG-sv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT 139 (383)
T 3ox4_A 84 LKDNNSDFVISLGGG-SPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTT 139 (383)
T ss_dssp HHHHTCSEEEEEESH-HHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECS
T ss_pred HHhcCcCEEEEeCCc-HHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCC
Confidence 212468999999994 55443 222 8999999974
No 102
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=56.27 E-value=27 Score=25.25 Aligned_cols=66 Identities=11% Similarity=-0.054 Sum_probs=40.5
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee--cCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK--WYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~---~~l~~~~~~~ 107 (174)
++|+|+.||... -..+.+.|.+.+++++......... . ..++.... ..+.. .++ ..+|+
T Consensus 4 k~vlVTGasg~I--------G~~la~~L~~~G~~V~~~~r~~~~~-----~-~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 67 (267)
T 3rft_A 4 KRLLVTGAAGQL--------GRVMRERLAPMAEILRLADLSPLDP-----A-GPNEECVQCDLADANAVNAMV--AGCDG 67 (267)
T ss_dssp EEEEEESTTSHH--------HHHHHHHTGGGEEEEEEEESSCCCC-----C-CTTEEEEECCTTCHHHHHHHH--TTCSE
T ss_pred CEEEEECCCCHH--------HHHHHHHHHhcCCEEEEEecCCccc-----c-CCCCEEEEcCCCCHHHHHHHH--cCCCE
Confidence 578898887753 4556677777788877766543322 1 23444333 22322 344 57999
Q ss_pred EEecCCh
Q psy16939 108 FITHGGI 114 (174)
Q Consensus 108 ~I~hgG~ 114 (174)
+||.+|.
T Consensus 68 vi~~Ag~ 74 (267)
T 3rft_A 68 IVHLGGI 74 (267)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 9999985
No 103
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=56.16 E-value=10 Score=29.75 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=23.2
Q ss_pred CCccEEEecCChhhHHHH-----HHcCCCeEecccc
Q psy16939 103 PNLRLFITHGGISSLMEA-----SSLGVPVLGVPFF 133 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~ea-----l~~g~P~i~vP~~ 133 (174)
..+|++|.=||. ++.++ ...|+|++.||..
T Consensus 105 ~~~d~IIavGGG-s~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 105 HGSDILVGVGGG-KTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HTCSEEEEESSH-HHHHHHHHHHHHTTCEEEECCSS
T ss_pred cCCCEEEEeCCc-HHHHHHHHHHHhcCCCEEEecCc
Confidence 468999999995 55544 4579999999973
No 104
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=54.98 E-value=10 Score=28.93 Aligned_cols=36 Identities=8% Similarity=0.073 Sum_probs=26.0
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++++.|+.+. ...+..+.++|.+.|++|.+.+..
T Consensus 6 ~il~~~~~~~Gh-----v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH-----VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH-----HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc-----cccHHHHHHHHHhCCCEEEEEcCH
Confidence 567777776542 345677888898889988887754
No 105
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=54.80 E-value=42 Score=21.97 Aligned_cols=114 Identities=8% Similarity=-0.048 Sum_probs=62.3
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
++++..+++.. +.+.+|..+.. +...-..+++.+.+.+++ +|-.++.. ..+ . .++..++.+ .+
T Consensus 3 ~~~l~~ll~~p-~~vaVvGas~~------~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~-----i-~G~~~~~sl--~e 66 (140)
T 1iuk_A 3 DQELRAYLSQA-KTIAVLGAHKD------PSRPAHYVPRYLREQGYR-VLPVNPRFQGEE-----L-FGEEAVASL--LD 66 (140)
T ss_dssp HHHHHHHHHHC-CEEEEETCCSS------TTSHHHHHHHHHHHTTCE-EEEECGGGTTSE-----E-TTEECBSSG--GG
T ss_pred HHHHHHHHcCC-CEEEEECCCCC------CCChHHHHHHHHHHCCCE-EEEeCCCcccCc-----C-CCEEecCCH--HH
Confidence 35677777333 47777765543 222344566667778887 55554431 111 1 122222211 11
Q ss_pred hhcCCCccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE
Q psy16939 99 ILAHPNLRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~ 151 (174)
+- ..+|++|.-=- ...+-|+...|+..+++-....|..-++.+++.|+-++
T Consensus 67 l~--~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~~~~~~~a~~~Gir~v 121 (140)
T 1iuk_A 67 LK--EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVV 121 (140)
T ss_dssp CC--SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEE
T ss_pred CC--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCcCHHHHHHHHHHcCCEEE
Confidence 11 23454443222 23466788899998777544567777788888887654
No 106
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=54.33 E-value=42 Score=23.10 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=48.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCCCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~ 110 (174)
+|.|.|-+||.. .....++..+.|+..+..+-+.+-+ .+.++ ++..| ..-+....++++|.
T Consensus 5 ~p~V~IimgS~S-----D~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~----------~l~~~---~~~~~~~g~~ViIa 66 (166)
T 3oow_A 5 SVQVGVIMGSKS-----DWSTMKECCDILDNLGIGYECEVVSAHRTPD----------KMFDY---AETAKERGLKVIIA 66 (166)
T ss_dssp CEEEEEEESSGG-----GHHHHHHHHHHHHHTTCEEEEEECCTTTCHH----------HHHHH---HHHTTTTTCCEEEE
T ss_pred CCeEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEcCcCCHH----------HHHHH---HHHHHhCCCcEEEE
Confidence 356777777774 4778999999999998765444333 33221 00001 11111134788888
Q ss_pred cCChhhHHHHH---HcCCCeEeccc
Q psy16939 111 HGGISSLMEAS---SLGVPVLGVPF 132 (174)
Q Consensus 111 hgG~~t~~eal---~~g~P~i~vP~ 132 (174)
-+|...-.-.+ ..-+|+|.+|.
T Consensus 67 ~AG~aa~LpgvvA~~t~~PVIgVP~ 91 (166)
T 3oow_A 67 GAGGAAHLPGMVAAKTTLPVLGVPV 91 (166)
T ss_dssp EECSSCCHHHHHHHTCSSCEEEEEC
T ss_pred ECCcchhhHHHHHhccCCCEEEeec
Confidence 77754333322 34689999986
No 107
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=54.05 E-value=14 Score=25.35 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=45.4
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCC-CccEEEe
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHP-NLRLFIT 110 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~-~~~~~I~ 110 (174)
+.|.|-+||.. .....++....|+..+.++-+.+-+ .+.++- +..|.. -.... .++++|.
T Consensus 3 ~~V~Iimgs~S-----D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~----------~~~~~~---~a~~~~~~~ViIa 64 (159)
T 3rg8_A 3 PLVIILMGSSS-----DMGHAEKIASELKTFGIEYAIRIGSAHKTAEH----------VVSMLK---EYEALDRPKLYIT 64 (159)
T ss_dssp CEEEEEESSGG-----GHHHHHHHHHHHHHTTCEEEEEECCTTTCHHH----------HHHHHH---HHHTSCSCEEEEE
T ss_pred CeEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEcccCCHHH----------HHHHHH---HhhhcCCCcEEEE
Confidence 55666677764 4678899999999988765444332 333310 000110 01111 4778888
Q ss_pred cCChhhHHHH---HHcCCCeEeccc
Q psy16939 111 HGGISSLMEA---SSLGVPVLGVPF 132 (174)
Q Consensus 111 hgG~~t~~ea---l~~g~P~i~vP~ 132 (174)
-+|...-.-. -..-+|+|.+|.
T Consensus 65 ~AG~aa~LpgvvA~~t~~PVIgVP~ 89 (159)
T 3rg8_A 65 IAGRSNALSGFVDGFVKGATIACPP 89 (159)
T ss_dssp ECCSSCCHHHHHHHHSSSCEEECCC
T ss_pred ECCchhhhHHHHHhccCCCEEEeeC
Confidence 7774332222 235688888885
No 108
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=53.44 E-value=22 Score=25.88 Aligned_cols=75 Identities=12% Similarity=-0.017 Sum_probs=43.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeec-C-Cchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKW-Y-PQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~-~-p~~~---~l~---- 101 (174)
.++++|+.||.+. -..+++.|.+.+++++....... ..++.+ ..+.++..... + +... ++.
T Consensus 5 ~k~vlVTGas~gI--------G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 5 AKVWLVTGASSGF--------GRAIAEAAVAAGDTVIGTARRTEALDDLVA-AYPDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CCEEEETTTTSHH--------HHHHHHHHHHTTCEEEEEESSGGGGHHHHH-HCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 3689999888753 45667777778998887765432 111111 23344544432 2 2211 111
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 76 ~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 76 RYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHSCCSEEEECCCCE
T ss_pred hCCCCCEEEECCCcC
Confidence 13689999999953
No 109
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=53.15 E-value=15 Score=23.92 Aligned_cols=107 Identities=8% Similarity=0.040 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc---CCCccE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA---HPNLRL 107 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~---~~~~~~ 107 (174)
..++++.+|.. -..+.+.|...+++++..-...+ ...+. ...-.+ +..-....+.|. ...+|+
T Consensus 8 ~~viIiG~G~~----------G~~la~~L~~~g~~v~vid~~~~~~~~~~--~~g~~~-i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 8 NHALLVGYGRV----------GSLLGEKLLASDIPLVVIETSRTRVDELR--ERGVRA-VLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp SCEEEECCSHH----------HHHHHHHHHHTTCCEEEEESCHHHHHHHH--HTTCEE-EESCTTSHHHHHHTTGGGCSE
T ss_pred CCEEEECcCHH----------HHHHHHHHHHCCCCEEEEECCHHHHHHHH--HcCCCE-EECCCCCHHHHHhcCcccCCE
Confidence 35667766665 34566777778888777655432 11111 111222 333333333332 146888
Q ss_pred EEecCChhh----HHHHHH---cCCCeEeccccchHHHHHHHHHHcCceeEecC
Q psy16939 108 FITHGGISS----LMEASS---LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154 (174)
Q Consensus 108 ~I~hgG~~t----~~eal~---~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~ 154 (174)
+|.--+... +...+. .+++++.. .....+...+.+.|+-.++.+
T Consensus 75 vi~~~~~~~~n~~~~~~a~~~~~~~~iiar---~~~~~~~~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARAKNPDIEIIAR---AHYDDEVAYITERGANQVVMG 125 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEE---ESSHHHHHHHHHTTCSEEEEH
T ss_pred EEEECCChHHHHHHHHHHHHHCCCCeEEEE---ECCHHHHHHHHHCCCCEEECc
Confidence 886554322 112221 23333322 344467788999999988864
No 110
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=51.76 E-value=8.2 Score=29.45 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH--------
Q psy16939 51 ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS-------- 122 (174)
Q Consensus 51 ~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~-------- 122 (174)
+..+++.+.|...+..+.+......-. . .... ..... ..+|++|.-||-||+.|++.
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~~-~-----------~~~~--~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKGD-A-----------ARYV--EEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTTH-H-----------HHHH--HHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcch-H-----------HHHH--HHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 457788888888888766543321100 0 0000 11111 45899999999999999853
Q ss_pred cCCCeEeccc
Q psy16939 123 LGVPVLGVPF 132 (174)
Q Consensus 123 ~g~P~i~vP~ 132 (174)
.++|+.++|.
T Consensus 109 ~~~plgiiP~ 118 (332)
T 2bon_A 109 DIPALGILPL 118 (332)
T ss_dssp CCCEEEEEEC
T ss_pred CCCeEEEecC
Confidence 5679888996
No 111
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=51.73 E-value=15 Score=25.76 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKI 71 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~ 71 (174)
+|.|-|-+||.. ....+++..+.|+..+..+-+.+
T Consensus 22 kp~V~IimGS~S-----D~~v~~~a~~~L~~~gI~~e~~V 56 (181)
T 4b4k_A 22 KSLVGVIMGSTS-----DWETMKYACDILDELNIPYEKKV 56 (181)
T ss_dssp CCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccEEEEECCHh-----HHHHHHHHHHHHHHcCCCeeEEE
Confidence 688888888885 46789999999999987654443
No 112
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=50.66 E-value=11 Score=28.68 Aligned_cols=81 Identities=14% Similarity=0.002 Sum_probs=49.1
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGG 113 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG 113 (174)
.|+++-.|... ......+++.+.|+..+..+.+......-.. . ... .... ...+|++|.-||
T Consensus 28 ~vI~NP~sg~~---~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a----~--------~~~--~~~~-~~~~d~vvv~GG 89 (337)
T 2qv7_A 28 RIIYNPTSGKE---QFKRELPDALIKLEKAGYETSAYATEKIGDA----T--------LEA--ERAM-HENYDVLIAAGG 89 (337)
T ss_dssp EEEECTTSTTS---CHHHHHHHHHHHHHHTTEEEEEEECCSTTHH----H--------HHH--HHHT-TTTCSEEEEEEC
T ss_pred EEEECCCCCCC---chHHHHHHHHHHHHHcCCeEEEEEecCcchH----H--------HHH--HHHh-hcCCCEEEEEcC
Confidence 35555444322 2346678888999888876555432211110 0 000 1111 146899999999
Q ss_pred hhhHHHHHH------cCCCeEeccc
Q psy16939 114 ISSLMEASS------LGVPVLGVPF 132 (174)
Q Consensus 114 ~~t~~eal~------~g~P~i~vP~ 132 (174)
-||+.|++. .++|+.++|.
T Consensus 90 DGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 90 DGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred chHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999864 4679999996
No 113
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=50.31 E-value=70 Score=23.21 Aligned_cols=73 Identities=18% Similarity=0.119 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCch-h----hhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQT-D----ILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~-~----~l~~~~~ 105 (174)
.++++||.||.+. -..+...|.+.|.+|++.....+..+ + ....++....- +... . +=.+.+.
T Consensus 11 GK~alVTGas~GI--------G~aia~~la~~Ga~Vv~~~~~~~~~~--~-~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 11 GQQVLVTGGSSGI--------GAAIAMQFAELGAEVVALGLDADGVH--A-PRHPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSTTSTT--S-CCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCCHHHHh--h-hhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 4799999988864 67788889999999888765432111 1 22334433332 2111 1 1123789
Q ss_pred cEEEecCChh
Q psy16939 106 RLFITHGGIS 115 (174)
Q Consensus 106 ~~~I~hgG~~ 115 (174)
|+.|+.+|..
T Consensus 80 DiLVNNAGi~ 89 (242)
T 4b79_A 80 DVLVNNAGIS 89 (242)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999963
No 114
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=50.27 E-value=39 Score=24.10 Aligned_cols=75 Identities=15% Similarity=0.048 Sum_probs=42.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-C-CccccccCCCCCEEEee--cCCchhhhc------
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-N-DPVLNAKTLPDNVFIQK--WYPQTDILA------ 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~-~~~~~~~~~~~nv~~~~--~~p~~~~l~------ 101 (174)
.++++|+.||.+. -..+.+.|.+.+++++...... . ..+..+ ....++.... ..+...+-.
T Consensus 7 ~k~vlVTGas~gI--------G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 7 DKLAVITGGANGI--------GRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 4789999888754 5567777777899887765543 1 110000 1233444433 222222110
Q ss_pred --CCCccEEEecCChh
Q psy16939 102 --HPNLRLFITHGGIS 115 (174)
Q Consensus 102 --~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 78 ~~~g~id~lv~nAg~~ 93 (249)
T 2ew8_A 78 STFGRCDILVNNAGIY 93 (249)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 14789999999853
No 115
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.82 E-value=29 Score=22.20 Aligned_cols=98 Identities=9% Similarity=0.007 Sum_probs=48.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc---CCCccEEEecCChh-----hHHHHHHc
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA---HPNLRLFITHGGIS-----SLMEASSL 123 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~---~~~~~~~I~hgG~~-----t~~eal~~ 123 (174)
-..+.+.|.+.+++++..-.... ...+. ....++.. .-..+.+.+. ...+|++|.--|.. .+..+-..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~--~~~~~~~~-gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~ 94 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLE--DEGFDAVI-ADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSV 94 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHH--HTTCEEEE-CCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHH--HCCCcEEE-CCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHh
Confidence 34567777778888777654322 11111 11122222 2233333332 25688888766632 12222234
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ 155 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~ 155 (174)
|.+.++.-. ....+...+.+.|+-.++.+.
T Consensus 95 ~~~~iia~~--~~~~~~~~l~~~G~~~vi~p~ 124 (141)
T 3llv_A 95 SDVYAIVRV--SSPKKKEEFEEAGANLVVLVA 124 (141)
T ss_dssp CCCCEEEEE--SCGGGHHHHHHTTCSEEEEHH
T ss_pred CCceEEEEE--cChhHHHHHHHcCCCEEECHH
Confidence 555444422 222455678889988777543
No 116
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=49.56 E-value=42 Score=20.49 Aligned_cols=105 Identities=12% Similarity=0.141 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...++..++.+.......+.-+..+ ....++.+.++ +|..+ |. .+.+.+.
T Consensus 11 ~~~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~-~~~~dlvllD~~~p~~~--------------g~-~~~~~l~~~~~~ 74 (122)
T 3gl9_A 11 SAVLRKIVSFNLKKEGYEVIEAENGQIALEKLS-EFTPDLIVLXIMMPVMD--------------GF-TVLKKLQEKEEW 74 (122)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHT-TBCCSEEEECSCCSSSC--------------HH-HHHHHHHTSTTT
T ss_pred CHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHH-hcCCCEEEEeccCCCCc--------------HH-HHHHHHHhcccc
Confidence 345566666777777887765433322111111 22345555554 23221 22 3344443
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|++++-...+. .......+.|+--.+. +.++.++|..++++++.
T Consensus 75 ~~~pii~~s~~~~~-~~~~~~~~~Ga~~~l~-KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGE-EDESLALSLGARKVMR-KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCch-HHHHHHHhcChhhhcc-CCCCHHHHHHHHHHHhc
Confidence 35788888654433 3445556778766664 45789999999998875
No 117
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=49.52 E-value=16 Score=28.56 Aligned_cols=80 Identities=16% Similarity=0.204 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCcccccc-CCC---CCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH--
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAK-TLP---DNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS-- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~---~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~-- 122 (174)
..+.+.++.+.|.+.++.+++--.-.....+... ..+ ...... ..+..++- ..+|++|+=||-||+..+..
T Consensus 52 ~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~DlvI~lGGDGT~L~aa~~~ 128 (365)
T 3pfn_A 52 LLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTF-REDYDDIS--NQIDFIICLGGDGTLLYASSLF 128 (365)
T ss_dssp GHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEE-CTTTCCCT--TTCSEEEEESSTTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCEEEEehHHhhhhcccccccccccccccccc-ccChhhcc--cCCCEEEEEcChHHHHHHHHHh
Confidence 4677899999999888777664221110000000 000 000110 01222232 67999999999999999976
Q ss_pred --cCCCeEecc
Q psy16939 123 --LGVPVLGVP 131 (174)
Q Consensus 123 --~g~P~i~vP 131 (174)
.++|++.+-
T Consensus 129 ~~~~~PvlGiN 139 (365)
T 3pfn_A 129 QGSVPPVMAFH 139 (365)
T ss_dssp SSSCCCEEEEE
T ss_pred ccCCCCEEEEc
Confidence 358988774
No 118
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=49.46 E-value=12 Score=29.51 Aligned_cols=30 Identities=30% Similarity=0.552 Sum_probs=25.2
Q ss_pred CCccEEEecCChhhHHHHHHc----CC-CeEeccc
Q psy16939 103 PNLRLFITHGGISSLMEASSL----GV-PVLGVPF 132 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~----g~-P~i~vP~ 132 (174)
..+|++|+=||-||+..++.. ++ |++.++.
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 469999999999999999654 56 7998864
No 119
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.93 E-value=34 Score=23.75 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCCCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~ 110 (174)
++.|.|-+||.. .....++....|+..+.++-+.+-+ .+.++ ++..|..... ...++++|.
T Consensus 7 ~~~V~IimgS~S-----D~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~----------~~~~~~~~a~---~~g~~ViIa 68 (174)
T 3lp6_A 7 RPRVGVIMGSDS-----DWPVMADAAAALAEFDIPAEVRVVSAHRTPE----------AMFSYARGAA---ARGLEVIIA 68 (174)
T ss_dssp CCSEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTCHH----------HHHHHHHHHH---HHTCCEEEE
T ss_pred CCeEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEECCCCCHH----------HHHHHHHHHH---hCCCCEEEE
Confidence 466667777764 4778999999999998865444333 33331 0001110000 134677887
Q ss_pred cCChhh----HHHHHHcCCCeEecccc
Q psy16939 111 HGGISS----LMEASSLGVPVLGVPFF 133 (174)
Q Consensus 111 hgG~~t----~~eal~~g~P~i~vP~~ 133 (174)
-+|... +..+ ..-+|+|.+|..
T Consensus 69 ~AG~aa~LpgvvA~-~t~~PVIgVP~~ 94 (174)
T 3lp6_A 69 GAGGAAHLPGMVAA-ATPLPVIGVPVP 94 (174)
T ss_dssp EEESSCCHHHHHHH-HCSSCEEEEEEC
T ss_pred ecCchhhhHHHHHh-ccCCCEEEeeCC
Confidence 776432 3333 356899999864
No 120
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=48.49 E-value=55 Score=21.49 Aligned_cols=113 Identities=11% Similarity=0.062 Sum_probs=58.7
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-ccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-PVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
+.+..++.... ++.+|..|.... ..-..+++.+.+.+++ ++-.++... .+ . .++..++.+ .++
T Consensus 4 ~~l~~ll~~p~-~IavIGas~~~g------~~G~~~~~~L~~~G~~-v~~vnp~~~g~~-----i-~G~~~~~sl--~el 67 (145)
T 2duw_A 4 NDIAGILTSTR-TIALVGASDKPD------RPSYRVMKYLLDQGYH-VIPVSPKVAGKT-----L-LGQQGYATL--ADV 67 (145)
T ss_dssp CSHHHHHHHCC-CEEEESCCSCTT------SHHHHHHHHHHHHTCC-EEEECSSSTTSE-----E-TTEECCSST--TTC
T ss_pred HHHHHHHhCCC-EEEEECcCCCCC------ChHHHHHHHHHHCCCE-EEEeCCcccccc-----c-CCeeccCCH--HHc
Confidence 34677775444 788887765321 1233455556666777 555554331 11 1 122322222 222
Q ss_pred hcCCCccEEEecCChh----hHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE
Q psy16939 100 LAHPNLRLFITHGGIS----SLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~----t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~ 151 (174)
- ..+|++|.-=-.. .+-+++..|+..+++-....+..-+..+++.|+-++
T Consensus 68 ~--~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 68 P--EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSVV 121 (145)
T ss_dssp S--SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEEE
T ss_pred C--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEEE
Confidence 2 3456655433322 344456778887776433446666677777777654
No 121
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=48.40 E-value=51 Score=22.87 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKI 71 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~ 71 (174)
++.|.|-+||.. .....++....|+..+..+-+.+
T Consensus 12 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~ev~V 46 (174)
T 3kuu_A 12 GVKIAIVMGSKS-----DWATMQFAADVLTTLNVPFHVEV 46 (174)
T ss_dssp CCCEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCcEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEE
Confidence 456777777764 47789999999999988654443
No 122
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=48.26 E-value=54 Score=22.71 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=27.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKI 71 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~ 71 (174)
.|.|-|-+||.. ....+++..+.|+.++..+-+.+
T Consensus 12 ~P~V~IimGS~S-----D~~v~~~a~~~l~~~gi~~ev~V 46 (173)
T 4grd_A 12 APLVGVLMGSSS-----DWDVMKHAVAILQEFGVPYEAKV 46 (173)
T ss_dssp SCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeCcHh-----HHHHHHHHHHHHHHcCCCEEEEE
Confidence 677888888875 47789999999999987654443
No 123
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=48.20 E-value=65 Score=22.27 Aligned_cols=127 Identities=10% Similarity=-0.009 Sum_probs=67.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC--CCC--ccccccCCCCCEEEeecCC-----chhhhcCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI--TND--PVLNAKTLPDNVFIQKWYP-----QTDILAHP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~--~~~--~~~~~~~~~~nv~~~~~~p-----~~~~l~~~ 103 (174)
++++.-.||... . ...++++.|.+.+..+-+.... ..+ ++-.+ .+..+ +.+... +-++. .
T Consensus 4 ~IllgvTGs~aa----~--k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~-~l~~~--~~d~~~~~~~~hi~l~--~ 72 (181)
T 1g63_A 4 KLLICATASINV----I--NINHYIVELKQHFDEVNILFSPSSKNFINTDVLK-LFCDN--LYDEIKDPLLNHINIV--E 72 (181)
T ss_dssp CEEEEECSCGGG----G--GHHHHHHHHTTTSSCEEEEECGGGGGTSCGGGGG-GTSSC--EECTTTCTTCCHHHHH--H
T ss_pred EEEEEEECHHHH----H--HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHH-HHhCC--cccccCCCCCcccccc--c
Confidence 566666677654 1 2556677777767655444333 111 11011 23444 333221 22223 4
Q ss_pred CccE-EEecCChhhHH-------------HHHHcCCCeEeccccc-------hHHHHHHHHHHcCceeE---ec------
Q psy16939 104 NLRL-FITHGGISSLM-------------EASSLGVPVLGVPFFG-------DQYRNMVLLRHRGYALI---EP------ 153 (174)
Q Consensus 104 ~~~~-~I~hgG~~t~~-------------eal~~g~P~i~vP~~~-------dQ~~na~~l~~~G~g~~---l~------ 153 (174)
.+|+ +|.-+-+||+. -++..++|++++|-.. -...|-..+.+.|+-+. ..
T Consensus 73 ~aD~~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~la 152 (181)
T 1g63_A 73 NHEYILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSFEIS 152 (181)
T ss_dssp TCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTTTCEECCCEECC-----
T ss_pred cCCEEEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCCEEECCCCCcccccc
Confidence 5774 55566666653 3366789999999432 12557788888877554 11
Q ss_pred --C-----CCCCHHHHHHHHHHhh
Q psy16939 154 --I-----QTLTKQSFLKNAQTML 170 (174)
Q Consensus 154 --~-----~~~~~~~l~~al~~ll 170 (174)
. .-.+.++|.+.+.+.+
T Consensus 153 cg~~~g~g~~~~~~~iv~~v~~~l 176 (181)
T 1g63_A 153 SGRYKNNITMPNIENVLNFVLNNE 176 (181)
T ss_dssp -----CCEECCCHHHHHHHHHC--
T ss_pred cCCccCCcCCCCHHHHHHHHHHHh
Confidence 1 1125777777776655
No 124
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=48.13 E-value=24 Score=25.04 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=36.4
Q ss_pred HHcCCCeEeccc----cchHHHHHHHHHHcCceeEecC--CC---------CCHHHHHHHHHHhhcC
Q psy16939 121 SSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPI--QT---------LTKQSFLKNAQTMLND 172 (174)
Q Consensus 121 l~~g~P~i~vP~----~~dQ~~na~~l~~~G~g~~l~~--~~---------~~~~~l~~al~~ll~~ 172 (174)
+..++|++++|. ......|...+.+.|+-+.-.. .. .+.+.+.+.+.+.|+.
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 446999999996 4566779999999997665321 01 2346778888877765
No 125
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=47.91 E-value=54 Score=21.22 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEe-cCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKI-DITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---- 122 (174)
.......+...|+..|+..+... .+.+.-+..+ ..+.++.+.++ +|.++=+ .+++.+.
T Consensus 21 ~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~-~~~~DlillD~~MP~mdG~---------------el~~~ir~~~~ 84 (134)
T 3to5_A 21 FSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLK-KGDFDFVVTDWNMPGMQGI---------------DLLKNIRADEE 84 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH-HHCCSEEEEESCCSSSCHH---------------HHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHH-hCCCCEEEEcCCCCCCCHH---------------HHHHHHHhCCC
Confidence 45556666677888888654433 3222111111 23456777776 5554422 3344443
Q ss_pred -cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 123 -LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 123 -~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|+|++.-..+.. ......+.|+--.+. +-++.++|.+.+++++.
T Consensus 85 ~~~ipvI~lTa~~~~~-~~~~~~~~Ga~~yl~-KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 85 LKHLPVLMITAEAKRE-QIIEAAQAGVNGYIV-KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTCCEEEEESSCCHH-HHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHCC
T ss_pred CCCCeEEEEECCCCHH-HHHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHh
Confidence 468988886655443 445556778877764 45799999999998874
No 126
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=47.53 E-value=38 Score=20.47 Aligned_cols=106 Identities=7% Similarity=-0.037 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CC-chhhhcCCCccEEEecCChhhHHHHHH----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YP-QTDILAHPNLRLFITHGGISSLMEASS---- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p-~~~~l~~~~~~~~I~hgG~~t~~eal~---- 122 (174)
.......+...+++.++++..........+... ..+..+.+.++ .| ... |. .+.+.+.
T Consensus 14 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~-~~~~dlvi~d~~~~~~~~--------------g~-~~~~~l~~~~~ 77 (127)
T 2gkg_A 14 DTALSATLRSALEGRGFTVDETTDGKGSVEQIR-RDRPDLVVLAVDLSAGQN--------------GY-LICGKLKKDDD 77 (127)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCHHHHHHHHH-HHCCSEEEEESBCGGGCB--------------HH-HHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHhcCceEEEecCHHHHHHHHH-hcCCCEEEEeCCCCCCCC--------------HH-HHHHHHhcCcc
Confidence 344566666777777777664433222111001 12234555544 22 111 11 2333333
Q ss_pred -cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 123 -LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 123 -~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++++ ...+ ........+.|+--.+. +.++.++|...+++++..+
T Consensus 78 ~~~~~ii~~-~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 78 LKNVPIVII-GNPD-GFAQHRKLKAHADEYVA-KPVDADQLVERAGALIGFP 126 (127)
T ss_dssp TTTSCEEEE-ECGG-GHHHHHHSTTCCSEEEE-SSCCHHHHHHHHHHHHCCC
T ss_pred ccCCCEEEE-ecCC-chhHHHHHHhCcchhee-CCCCHHHHHHHHHHHHcCC
Confidence 46899888 4333 33444455667655554 4568999999999988754
No 127
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=47.31 E-value=26 Score=28.06 Aligned_cols=28 Identities=25% Similarity=0.465 Sum_probs=22.0
Q ss_pred CccEEEecCChhhHHHH-----HHcCCCeEeccc
Q psy16939 104 NLRLFITHGGISSLMEA-----SSLGVPVLGVPF 132 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~ea-----l~~g~P~i~vP~ 132 (174)
++|++|.=||. ++.++ ...|+|++.||.
T Consensus 145 ~~D~IIAvGGG-SviD~AK~iA~~~giP~I~IPT 177 (450)
T 1ta9_A 145 DTQVIIGVGGG-KTMDSAKYIAHSMNLPSIICPT 177 (450)
T ss_dssp TCCEEEEEESH-HHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEeCCc-HHHHHHHHHHHhcCCCEEEEeC
Confidence 68999998884 55554 446999999997
No 128
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=46.96 E-value=87 Score=23.46 Aligned_cols=34 Identities=9% Similarity=-0.014 Sum_probs=24.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh--CCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ--LKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~--~~~~~i~~~~~ 73 (174)
.+.|+|+.||... -..+++.|.+ .+++|+.....
T Consensus 10 ~~~vlVTGatG~I--------G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 10 NQTILITGGAGFV--------GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHhhCCCCeEEEEECC
Confidence 3689999888764 4456666666 78888877653
No 129
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=46.94 E-value=80 Score=22.88 Aligned_cols=72 Identities=7% Similarity=-0.028 Sum_probs=36.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CC----cccc--ccCCCCCE--EEeecCCch---hhh
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-ND----PVLN--AKTLPDNV--FIQKWYPQT---DIL 100 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~----~~~~--~~~~~~nv--~~~~~~p~~---~~l 100 (174)
+.|+|+.||... ... +++.|.+.+++++...+.. .. .+.. ......++ ...+..+.. ..+
T Consensus 3 ~~vlVtGatG~i----G~~----l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~ 74 (307)
T 2gas_A 3 NKILILGPTGAI----GRH----IVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAI 74 (307)
T ss_dssp CCEEEESTTSTT----HHH----HHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCchH----HHH----HHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHH
Confidence 468888877653 444 4444444577777666543 10 0000 00001233 333343322 344
Q ss_pred cCCCccEEEecCCh
Q psy16939 101 AHPNLRLFITHGGI 114 (174)
Q Consensus 101 ~~~~~~~~I~hgG~ 114 (174)
..+|.+|+-+|.
T Consensus 75 --~~~d~vi~~a~~ 86 (307)
T 2gas_A 75 --KQVDIVICAAGR 86 (307)
T ss_dssp --TTCSEEEECSSS
T ss_pred --hCCCEEEECCcc
Confidence 579999998875
No 130
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=46.81 E-value=13 Score=28.67 Aligned_cols=93 Identities=9% Similarity=-0.040 Sum_probs=53.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CC---------------
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YP--------------- 95 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p--------------- 95 (174)
.++++++.|+.+. ...+..++++|.+.|++|.+.+.+...+.+. ...-.+...+. .+
T Consensus 21 ~rIl~~~~~~~GH-----v~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 21 AHLLIVNVASHGL-----ILPTLTVVTELVRRGHRVSYVTAGGFAEPVR--AAGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp CEEEEECCSCHHH-----HGGGHHHHHHHHHTTCEEEEEECGGGHHHHH--HTTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred CEEEEEeCCCccc-----cccHHHHHHHHHHCCCEEEEEeCHHHHHHHH--hcCCEEEeccccccccccchhhccccHHH
Confidence 4677777776543 2346678889999999988887543211110 01111111110 00
Q ss_pred ----------------chhhhcCCCccEEEec--CChhhHHHHHHcCCCeEecc
Q psy16939 96 ----------------QTDILAHPNLRLFITH--GGISSLMEASSLGVPVLGVP 131 (174)
Q Consensus 96 ----------------~~~~l~~~~~~~~I~h--gG~~t~~eal~~g~P~i~vP 131 (174)
...++..-+.|++|++ .+.....-|-..|+|.+.+-
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEE
Confidence 0122333468999987 45555666778999998863
No 131
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=46.35 E-value=52 Score=20.55 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...+...++.+.......+.-+... .....+.+.++ +|..+ |. .+.+.+.
T Consensus 13 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvl~D~~lp~~~--------------g~-~~~~~lr~~~~~ 76 (136)
T 3t6k_A 13 DDTVAEMLELVLRGAGYEVRRAASGEEALQQIY-KNLPDALICDVLLPGID--------------GY-TLCKRVRQHPLT 76 (136)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHH-HSCCSEEEEESCCSSSC--------------HH-HHHHHHHHSGGG
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHH-hCCCCEEEEeCCCCCCC--------------HH-HHHHHHHcCCCc
Confidence 345566666777777877654433222111111 22345555554 23221 11 2333333
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++++-...+.. ......+.|+--.+. +.++.++|..++++++..
T Consensus 77 ~~~pii~~t~~~~~~-~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 77 KTLPILMLTAQGDIS-AKIAGFEAGANDYLA-KPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TTCCEEEEECTTCHH-HHHHHHHHTCSEEEE-TTCCHHHHHHHHHHHHHC
T ss_pred CCccEEEEecCCCHH-HHHHHHhcCcceEEe-CCCCHHHHHHHHHHHHhc
Confidence 367888886544433 334444567665554 457899999999988754
No 132
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=46.20 E-value=41 Score=23.96 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=42.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-ccccccCCCCCEEEee--cCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-PVLNAKTLPDNVFIQK--WYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~nv~~~~--~~p~~~---~l~---- 101 (174)
.++++|+.||... -..+.+.|.+.+++++........ .+..+ ....++.+.. ..+... ++.
T Consensus 12 ~k~vlVTGasggi--------G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 12 GLVAVITGGASGL--------GLATAERLVGQGASAVLLDLPNSGGEAQAK-KLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEECTTSSHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeCCcHhHHHHHH-HhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999888753 456677777788888776654321 11111 1233444433 222222 121
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 83 ~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 83 KFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HCCCCCEEEECCccC
Confidence 13699999999853
No 133
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.47 E-value=32 Score=24.48 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=38.1
Q ss_pred HHHHcCCCeEeccc----cchHHHHHHHHHHcCceeEecCC-----C------CCHHHHHHHHHHhhcC
Q psy16939 119 EASSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPIQ-----T------LTKQSFLKNAQTMLND 172 (174)
Q Consensus 119 eal~~g~P~i~vP~----~~dQ~~na~~l~~~G~g~~l~~~-----~------~~~~~l~~al~~ll~~ 172 (174)
.++..++|++++|. ......|-..+.+.|.-+.-... + .+.++|.+.+.+.+.+
T Consensus 116 ~~L~~~~plvlaPamn~~m~~h~~Nm~~L~~~G~~ii~P~~~lacg~~g~g~mae~~~I~~~i~~~l~~ 184 (207)
T 3mcu_A 116 ATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQG 184 (207)
T ss_dssp HHHHTTCCEEEEEEETTTTTTTHHHHHHHHHBTTEEECCEEESCTTTSTTCEEECGGGHHHHHHHHHTT
T ss_pred HHHhcCCCEEEEECCChhHHHHHHHHHHHHHCCCEEECCCCccCCCCcCCcCCCCHHHHHHHHHHHHhC
Confidence 34678999999996 23446899999999987653211 1 3567888888877765
No 134
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=45.08 E-value=72 Score=23.78 Aligned_cols=74 Identities=12% Similarity=0.021 Sum_probs=39.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-c-ccc---c-cCCCCCEEEeecCCch---hhhcCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-P-VLN---A-KTLPDNVFIQKWYPQT---DILAHP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~-~~~---~-~~~~~nv~~~~~~p~~---~~l~~~ 103 (174)
+.|+|+.||... -..+++.|.+.+++++...+.... + +.. . ....-.+...+..+.. .++...
T Consensus 11 ~~IlVtGatG~i--------G~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFI--------GQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHH--------HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT
T ss_pred CeEEEECCCcHH--------HHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC
Confidence 578898887753 345566666678887777665411 1 000 0 0011223333333332 234111
Q ss_pred CccEEEecCCh
Q psy16939 104 NLRLFITHGGI 114 (174)
Q Consensus 104 ~~~~~I~hgG~ 114 (174)
.+|.+||-+|.
T Consensus 83 ~~d~Vi~~a~~ 93 (346)
T 3i6i_A 83 EIDIVVSTVGG 93 (346)
T ss_dssp TCCEEEECCCG
T ss_pred CCCEEEECCch
Confidence 79999999986
No 135
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=44.29 E-value=71 Score=21.54 Aligned_cols=46 Identities=13% Similarity=0.018 Sum_probs=29.4
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEe
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKI 71 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~ 71 (174)
-++..+.+...++|+|++..|.. ..+..+++.+..+..+.+|+-..
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~------~~~a~~~l~~lae~~~iPV~~t~ 69 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLAL------DPELLDRVVKISKAANIPIAATG 69 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTC------CHHHHHHHHHHHHHHTCCEEECT
T ss_pred HHHHHHHHHcCCCCEEEECCCcc------chhHHHHHHHHHHHhCCCEEECc
Confidence 35677788877777777766654 34445566666666677876543
No 136
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=44.26 E-value=75 Score=21.81 Aligned_cols=67 Identities=10% Similarity=0.037 Sum_probs=40.8
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee--cCC-chh---hhcCCCccE
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK--WYP-QTD---ILAHPNLRL 107 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~--~~p-~~~---~l~~~~~~~ 107 (174)
.|+|+.||... -..+++.|.+.+++++...+.....+ .. .++.+.. ..+ ... .+ ..+|+
T Consensus 2 ~ilItGatG~i--------G~~l~~~L~~~g~~V~~~~R~~~~~~----~~-~~~~~~~~D~~d~~~~~~~~~--~~~d~ 66 (219)
T 3dqp_A 2 KIFIVGSTGRV--------GKSLLKSLSTTDYQIYAGARKVEQVP----QY-NNVKAVHFDVDWTPEEMAKQL--HGMDA 66 (219)
T ss_dssp EEEEESTTSHH--------HHHHHHHHTTSSCEEEEEESSGGGSC----CC-TTEEEEECCTTSCHHHHHTTT--TTCSE
T ss_pred eEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECCccchh----hc-CCceEEEecccCCHHHHHHHH--cCCCE
Confidence 47788777653 45677777778888887776533211 11 3444443 233 222 33 67999
Q ss_pred EEecCChh
Q psy16939 108 FITHGGIS 115 (174)
Q Consensus 108 ~I~hgG~~ 115 (174)
+|+-+|..
T Consensus 67 vi~~ag~~ 74 (219)
T 3dqp_A 67 IINVSGSG 74 (219)
T ss_dssp EEECCCCT
T ss_pred EEECCcCC
Confidence 99999964
No 137
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=43.07 E-value=58 Score=20.23 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHhh-CCCcEEEEecCCCCccccccC-CCCCEEEeec-CC-chhhhcCCCccEEEecCChhhHHHHH---
Q psy16939 49 SEETKLGFLEVFKQ-LKLPIFWKIDITNDPVLNAKT-LPDNVFIQKW-YP-QTDILAHPNLRLFITHGGISSLMEAS--- 121 (174)
Q Consensus 49 ~~~~~~~i~~~l~~-~~~~~i~~~~~~~~~~~~~~~-~~~nv~~~~~-~p-~~~~l~~~~~~~~I~hgG~~t~~eal--- 121 (174)
.......+...|+. .++.++......+..+... . .+..+.+.++ +| ...-+ .+.+.+
T Consensus 13 ~~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~-~~~~~dlvi~D~~l~~~~~g~---------------~~~~~l~~~ 76 (140)
T 3lua_A 13 FEYEREKTKIIFDNIGEYDFIEVENLKKFYSIFK-DLDSITLIIMDIAFPVEKEGL---------------EVLSAIRNN 76 (140)
T ss_dssp CHHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTT-TCCCCSEEEECSCSSSHHHHH---------------HHHHHHHHS
T ss_pred CHHHHHHHHHHHHhccCccEEEECCHHHHHHHHh-cCCCCcEEEEeCCCCCCCcHH---------------HHHHHHHhC
Confidence 44556667777777 7888775444322111111 2 3445666654 33 22211 223333
Q ss_pred --HcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 122 --SLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 122 --~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
...+|+|++-...+... .....+.|+--.+. +.++.++|..++++++..
T Consensus 77 ~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 77 SRTANTPVIIATKSDNPGY-RHAALKFKVSDYIL-KPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp GGGTTCCEEEEESCCCHHH-HHHHHHSCCSEEEE-SSCCTTHHHHHHHHHHCC
T ss_pred cccCCCCEEEEeCCCCHHH-HHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHh
Confidence 34788888865444333 34445677666654 346789999999998764
No 138
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=42.70 E-value=84 Score=23.28 Aligned_cols=66 Identities=3% Similarity=-0.067 Sum_probs=39.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch---hhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT---DILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~~l~~~~~~~~ 108 (174)
.+.|+|+.||... -..+++.|.+.+++|+......... .-.+...+..+.. .++ ..+|++
T Consensus 19 ~~~vlVtGatG~i--------G~~l~~~L~~~G~~V~~~~r~~~~~-------~~~~~~~Dl~d~~~~~~~~--~~~d~v 81 (347)
T 4id9_A 19 SHMILVTGSAGRV--------GRAVVAALRTQGRTVRGFDLRPSGT-------GGEEVVGSLEDGQALSDAI--MGVSAV 81 (347)
T ss_dssp --CEEEETTTSHH--------HHHHHHHHHHTTCCEEEEESSCCSS-------CCSEEESCTTCHHHHHHHH--TTCSEE
T ss_pred CCEEEEECCCChH--------HHHHHHHHHhCCCEEEEEeCCCCCC-------CccEEecCcCCHHHHHHHH--hCCCEE
Confidence 4789999888753 4456666667788888776543211 1122333333322 344 579999
Q ss_pred EecCCh
Q psy16939 109 ITHGGI 114 (174)
Q Consensus 109 I~hgG~ 114 (174)
||-+|.
T Consensus 82 ih~A~~ 87 (347)
T 4id9_A 82 LHLGAF 87 (347)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 998874
No 139
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=42.53 E-value=81 Score=25.41 Aligned_cols=29 Identities=17% Similarity=0.074 Sum_probs=19.6
Q ss_pred CCccE-EEecCChhhHHHHHH------------cCCCeEecc
Q psy16939 103 PNLRL-FITHGGISSLMEASS------------LGVPVLGVP 131 (174)
Q Consensus 103 ~~~~~-~I~hgG~~t~~eal~------------~g~P~i~vP 131 (174)
..+|+ ++--||.||+-|... +.+|++++-
T Consensus 246 ~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln 287 (462)
T 3gh1_A 246 RMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTG 287 (462)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEE
T ss_pred HHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEc
Confidence 34554 556788999887641 238999983
No 140
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.29 E-value=62 Score=21.68 Aligned_cols=121 Identities=9% Similarity=0.005 Sum_probs=56.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc----CCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA----HPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~----~~~~~ 106 (174)
.++++.+|..+ ..+++.|... ++++++.-.... ...+. ...-.+...+..+ .+.+. ...+|
T Consensus 41 ~v~IiG~G~~G----------~~~a~~L~~~~g~~V~vid~~~~~~~~~~--~~g~~~~~gd~~~-~~~l~~~~~~~~ad 107 (183)
T 3c85_A 41 QVLILGMGRIG----------TGAYDELRARYGKISLGIEIREEAAQQHR--SEGRNVISGDATD-PDFWERILDTGHVK 107 (183)
T ss_dssp SEEEECCSHHH----------HHHHHHHHHHHCSCEEEEESCHHHHHHHH--HTTCCEEECCTTC-HHHHHTBCSCCCCC
T ss_pred cEEEECCCHHH----------HHHHHHHHhccCCeEEEEECCHHHHHHHH--HCCCCEEEcCCCC-HHHHHhccCCCCCC
Confidence 56666555442 3455566666 777766544322 11111 1122233333332 22221 25688
Q ss_pred EEEecCC-hhhH---HHHHHc-C-CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHH
Q psy16939 107 LFITHGG-ISSL---MEASSL-G-VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 107 ~~I~hgG-~~t~---~eal~~-g-~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ 168 (174)
++|.--+ .... .+.+.. + ...++. . ..-..+...+.+.|+..++.........+.+.+.+
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~-~-~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~ 173 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYKGQIAA-I-AEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCK 173 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCSEEEE-E-ESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCCCEEEE-E-ECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHH
Confidence 8887444 2221 222222 3 222222 2 22244567888889988875443344445554443
No 141
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=42.14 E-value=1.2e+02 Score=23.52 Aligned_cols=122 Identities=14% Similarity=0.110 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCC--CEEEeecCCchhhhcC-CCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD--NVFIQKWYPQTDILAH-PNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--nv~~~~~~p~~~~l~~-~~~~~~ 108 (174)
.+.|.|-.|+. .-..++.++.+.|++++... ....+.. ...+ .....++.+...+... ..+|++
T Consensus 24 ~~~I~ilGgG~---------lg~~l~~aa~~lG~~v~~~d-~~~~p~~---~~ad~~~~~~~~~~d~~~l~~~a~~~d~i 90 (403)
T 3k5i_A 24 SRKVGVLGGGQ---------LGRMLVESANRLNIQVNVLD-ADNSPAK---QISAHDGHVTGSFKEREAVRQLAKTCDVV 90 (403)
T ss_dssp CCEEEEECCSH---------HHHHHHHHHHHHTCEEEEEE-STTCTTG---GGCCSSCCEESCTTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCH---------HHHHHHHHHHHCCCEEEEEE-CCCCcHH---HhccccceeecCCCCHHHHHHHHHhCCEE
Confidence 35566655554 35667888888999888776 4332211 2233 4455566554443221 567876
Q ss_pred Ee---cCChhhHHHHHHcCCCeEeccc------cchHHHHHHHHHHcCceeEec--CCCCCHHHHHHHHHHh
Q psy16939 109 IT---HGGISSLMEASSLGVPVLGVPF------FGDQYRNMVLLRHRGYALIEP--IQTLTKQSFLKNAQTM 169 (174)
Q Consensus 109 I~---hgG~~t~~eal~~g~P~i~vP~------~~dQ~~na~~l~~~G~g~~l~--~~~~~~~~l~~al~~l 169 (174)
+. |-+...+ +.+..|+| +.|. ..|-..--..+++.|+-..-. ...-+.+++.+++.++
T Consensus 91 ~~e~e~~~~~~l-~~l~~g~~--v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~ 159 (403)
T 3k5i_A 91 TAEIEHVDTYAL-EEVASEVK--IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQL 159 (403)
T ss_dssp EESSSCSCHHHH-HHHTTTSE--ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHH
T ss_pred EECCCCCCHHHH-HHHHcCCc--cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHh
Confidence 64 5555444 44444887 3332 234444445666666654311 1111466666666543
No 142
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=41.80 E-value=41 Score=23.53 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=40.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-ccccccCCCC-CEEEeecC-CchhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-PVLNAKTLPD-NVFIQKWY-PQTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~-nv~~~~~~-p~~~~l~~~~~~~~ 108 (174)
.+.|+|+.||... -..+++.|.+.+++++...+.... .++.. ..- .+...+.. .....+ ..+|++
T Consensus 21 ~~~ilVtGatG~i--------G~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~--~~~D~v 88 (236)
T 3e8x_A 21 GMRVLVVGANGKV--------ARYLLSELKNKGHEPVAMVRNEEQGPELRE--RGASDIVVANLEEDFSHAF--ASIDAV 88 (236)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSGGGHHHHHH--TTCSEEEECCTTSCCGGGG--TTCSEE
T ss_pred CCeEEEECCCChH--------HHHHHHHHHhCCCeEEEEECChHHHHHHHh--CCCceEEEcccHHHHHHHH--cCCCEE
Confidence 4678999887753 445566666678888877665321 11100 011 12222222 122344 679999
Q ss_pred EecCChh
Q psy16939 109 ITHGGIS 115 (174)
Q Consensus 109 I~hgG~~ 115 (174)
|+-+|..
T Consensus 89 i~~ag~~ 95 (236)
T 3e8x_A 89 VFAAGSG 95 (236)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9999964
No 143
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=41.30 E-value=68 Score=20.48 Aligned_cols=105 Identities=11% Similarity=0.098 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+.+.|+..++.+.......+..+... ..+..+.+.++ +|... |. .+.+.+.
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~-~~~~dlii~D~~l~~~~--------------g~-~~~~~lr~~~~~ 79 (154)
T 3gt7_A 16 SPTQAEHLKHILEETGYQTEHVRNGREAVRFLS-LTRPDLIISDVLMPEMD--------------GY-ALCRWLKGQPDL 79 (154)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHT-TCCCSEEEEESCCSSSC--------------HH-HHHHHHHHSTTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHH-hCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhCCCc
Confidence 455677777778877887655433322111111 23345566654 23211 22 2333343
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|+|++-...+... .....+.|+--.+. +.++.++|..++++++.
T Consensus 80 ~~~pii~~s~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 80 RTIPVILLTILSDPRD-VVRSLECGADDFIT-KPCKDVVLASHVKRLLS 126 (154)
T ss_dssp TTSCEEEEECCCSHHH-HHHHHHHCCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHH-HHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 4678888865444333 34444567655554 35688999999988874
No 144
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=41.25 E-value=75 Score=21.75 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=45.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+.|.|-+||.. .....++....|+..+..+-+.+-+ .+.++- +..| ..-.....++++|.-
T Consensus 4 ~~V~Iimgs~S-----D~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~----------~~~~---~~~a~~~g~~ViIa~ 65 (163)
T 3ors_A 4 MKVAVIMGSSS-----DWKIMQESCNMLDYFEIPYEKQVVSAHRTPKM----------MVQF---ASEARERGINIIIAG 65 (163)
T ss_dssp CCEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHH----------HHHH---HHHTTTTTCCEEEEE
T ss_pred CeEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEECCcCCHHH----------HHHH---HHHHHhCCCcEEEEE
Confidence 55666667664 4778999999999998765444333 333310 0000 000111346777777
Q ss_pred CChhh----HHHHHHcCCCeEecccc
Q psy16939 112 GGISS----LMEASSLGVPVLGVPFF 133 (174)
Q Consensus 112 gG~~t----~~eal~~g~P~i~vP~~ 133 (174)
+|... +..+ ..-+|+|.+|..
T Consensus 66 AG~aa~LpgvvA~-~t~~PVIgVP~~ 90 (163)
T 3ors_A 66 AGGAAHLPGMVAS-LTTLPVIGVPIE 90 (163)
T ss_dssp EESSCCHHHHHHH-HCSSCEEEEEEC
T ss_pred CCchhhhHHHHHh-ccCCCEEEeeCC
Confidence 66432 2322 356888888863
No 145
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=41.19 E-value=89 Score=21.81 Aligned_cols=69 Identities=6% Similarity=-0.143 Sum_probs=42.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCC-CccccccCCCCCEEEee--cCCch---hhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITN-DPVLNAKTLPDNVFIQK--WYPQT---DILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~-~~~~~~~~~~~nv~~~~--~~p~~---~~l~~~~ 104 (174)
.+.|+|+.||... -..+++.|.+.+ ++++...+... ..+ ....++.+.. ..+.. .++ ..
T Consensus 23 mk~vlVtGatG~i--------G~~l~~~L~~~G~~~V~~~~R~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~--~~ 88 (236)
T 3qvo_A 23 MKNVLILGAGGQI--------ARHVINQLADKQTIKQTLFARQPAKIHK----PYPTNSQIIMGDVLNHAALKQAM--QG 88 (236)
T ss_dssp CEEEEEETTTSHH--------HHHHHHHHTTCTTEEEEEEESSGGGSCS----SCCTTEEEEECCTTCHHHHHHHH--TT
T ss_pred ccEEEEEeCCcHH--------HHHHHHHHHhCCCceEEEEEcChhhhcc----cccCCcEEEEecCCCHHHHHHHh--cC
Confidence 4678998887753 566777888888 77777665432 221 1233444443 23322 234 67
Q ss_pred ccEEEecCCh
Q psy16939 105 LRLFITHGGI 114 (174)
Q Consensus 105 ~~~~I~hgG~ 114 (174)
+|++|+.+|.
T Consensus 89 ~D~vv~~a~~ 98 (236)
T 3qvo_A 89 QDIVYANLTG 98 (236)
T ss_dssp CSEEEEECCS
T ss_pred CCEEEEcCCC
Confidence 8999988875
No 146
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=40.93 E-value=11 Score=26.51 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=22.4
Q ss_pred HHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 138 RNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 138 ~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+..=+..|+|+.+ |+|++.+++.+.+.
T Consensus 103 d~~~Fe~~cGVGV~V-----T~EqI~~~V~~~i~ 131 (187)
T 3tl4_X 103 TKMGMNENSGVGIEI-----TEDQVRNYVMQYIQ 131 (187)
T ss_dssp CHHHHHHTTTTTCCC-----CHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCCCeEe-----CHHHHHHHHHHHHH
Confidence 334444567999998 78999999998874
No 147
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=40.89 E-value=1.1e+02 Score=22.70 Aligned_cols=73 Identities=7% Similarity=0.027 Sum_probs=41.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-c-ccc--cCCC----CCEEEee--cCCch---h
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-V-LNA--KTLP----DNVFIQK--WYPQT---D 98 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~-~~~--~~~~----~nv~~~~--~~p~~---~ 98 (174)
.+.|+|+.||... -..+++.|.+.+++++......... . ... ...+ .++.+.. ..+.. .
T Consensus 25 ~~~vlVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 96 (351)
T 3ruf_A 25 PKTWLITGVAGFI--------GSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ 96 (351)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH
T ss_pred CCeEEEECCCcHH--------HHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 3789999888753 4455666666788887776543211 0 000 0000 3444433 22222 2
Q ss_pred hhcCCCccEEEecCCh
Q psy16939 99 ILAHPNLRLFITHGGI 114 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~ 114 (174)
++ ..+|++||-+|.
T Consensus 97 ~~--~~~d~Vih~A~~ 110 (351)
T 3ruf_A 97 VM--KGVDHVLHQAAL 110 (351)
T ss_dssp HT--TTCSEEEECCCC
T ss_pred Hh--cCCCEEEECCcc
Confidence 34 579999999985
No 148
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=40.73 E-value=43 Score=24.38 Aligned_cols=57 Identities=7% Similarity=-0.118 Sum_probs=28.9
Q ss_pred cccCCccccCChHHHHHHHhcCC--CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAAK--GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~--~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
-++.++-.....--+...+.... .++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 6 ~~~~~~~~~~~~~~~~~mm~~~~l~gk~~lVTGas~GI--------G~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 6 HHSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGI--------GAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp --------------CHHHHTTTCCTTCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred cccccccccccccchhhhccccCCCCCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 34444443322222333444322 5789999988753 566777788889988776543
No 149
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=40.45 E-value=1.2e+02 Score=24.93 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=22.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK 70 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~ 70 (174)
.+++++-+|+.. .+.+.++++..+..+.+.
T Consensus 8 ~~IlilD~Gs~~---------~~~I~r~lre~Gv~~eiv 37 (556)
T 3uow_A 8 DKILVLNFGSQY---------FHLIVKRLNNIKIFSETK 37 (556)
T ss_dssp CEEEEEESSCTT---------HHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEECCCcc---------HHHHHHHHHHCCCeEEEE
Confidence 578999999984 456777888888755443
No 150
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=40.34 E-value=91 Score=21.65 Aligned_cols=69 Identities=10% Similarity=-0.141 Sum_probs=39.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC--cEEEEecCCC-CccccccCCCCCEEE--eecCCch---hhhcCCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL--PIFWKIDITN-DPVLNAKTLPDNVFI--QKWYPQT---DILAHPN 104 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~--~~i~~~~~~~-~~~~~~~~~~~nv~~--~~~~p~~---~~l~~~~ 104 (174)
+.|+|+.||... -..+++.|.+.++ +++....... .... ...++.. .+..+.. .++ ..
T Consensus 19 ~~vlVtGasg~i--------G~~l~~~L~~~G~~~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~--~~ 84 (242)
T 2bka_A 19 KSVFILGASGET--------GRVLLKEILEQGLFSKVTLIGRRKLTFDEE----AYKNVNQEVVDFEKLDDYASAF--QG 84 (242)
T ss_dssp CEEEEECTTSHH--------HHHHHHHHHHHTCCSEEEEEESSCCCCCSG----GGGGCEEEECCGGGGGGGGGGG--SS
T ss_pred CeEEEECCCcHH--------HHHHHHHHHcCCCCCEEEEEEcCCCCcccc----ccCCceEEecCcCCHHHHHHHh--cC
Confidence 678998887753 4455666666687 7777665432 2110 0112222 2222222 234 57
Q ss_pred ccEEEecCChh
Q psy16939 105 LRLFITHGGIS 115 (174)
Q Consensus 105 ~~~~I~hgG~~ 115 (174)
+|++|+.+|..
T Consensus 85 ~d~vi~~ag~~ 95 (242)
T 2bka_A 85 HDVGFCCLGTT 95 (242)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCcc
Confidence 99999999864
No 151
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=40.27 E-value=53 Score=24.57 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=29.9
Q ss_pred HHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHH---HHhhCCCcEEEEecC
Q psy16939 23 LQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLE---VFKQLKLPIFWKIDI 73 (174)
Q Consensus 23 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~---~l~~~~~~~i~~~~~ 73 (174)
...|+.....++++|-+|+.... ..+.+..+++ .+.+.+.++++++++
T Consensus 17 a~pyi~~~~~k~iVIKlGGs~l~---~~~~~~~~~~~i~~l~~~G~~vVlVhGg 67 (300)
T 2buf_A 17 ALPYIRRFVGKTLVIKYGGNAME---SEELKAGFARDVVLMKAVGINPVVVHGG 67 (300)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTT---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HhHHHHHhcCCeEEEEECchhhC---CchHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 34455544457899999998763 2333444443 345568888888776
No 152
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=40.15 E-value=67 Score=20.10 Aligned_cols=106 Identities=8% Similarity=-0.028 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHhhCC-CcEEEEecCC-CCccccccC-CCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHH---
Q psy16939 49 SEETKLGFLEVFKQLK-LPIFWKIDIT-NDPVLNAKT-LPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEAS--- 121 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~-~~~i~~~~~~-~~~~~~~~~-~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal--- 121 (174)
.......+...|+..+ +.++...... .+..+.+ . .+..+.+.++ +|...-+ .+.+.+
T Consensus 29 ~~~~~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~dlvi~D~~l~~~~g~---------------~~~~~l~~~ 92 (146)
T 4dad_A 29 DASRLAHLARLVGDAGRYRVTRTVGRAAQIVQRTD-GLDAFDILMIDGAALDTAEL---------------AAIEKLSRL 92 (146)
T ss_dssp CHHHHHHHHHHHHHHCSCEEEEECCCHHHHTTCHH-HHTTCSEEEEECTTCCHHHH---------------HHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHHh-cCCCCCEEEEeCCCCCccHH---------------HHHHHHHHh
Confidence 3445666677777777 7777655432 1111111 2 3456666665 3433222 122222
Q ss_pred HcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 122 SLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 122 ~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
...+|+|++-...+. .......+.|+--.+. +.++.++|..++++++..
T Consensus 93 ~~~~~ii~lt~~~~~-~~~~~~~~~ga~~~l~-Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 93 HPGLTCLLVTTDASS-QTLLDAMRAGVRDVLR-WPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp CTTCEEEEEESCCCH-HHHHHHHTTTEEEEEE-SSCCHHHHHHHHHHHHHT
T ss_pred CCCCcEEEEeCCCCH-HHHHHHHHhCCceeEc-CCCCHHHHHHHHHHHHhh
Confidence 236788887554443 3334445677766664 357899999999998764
No 153
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=39.95 E-value=66 Score=19.93 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCc--hhhhcCCCccEEEecCChhhHHHHHH---
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQ--TDILAHPNLRLFITHGGISSLMEASS--- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~--~~~l~~~~~~~~I~hgG~~t~~eal~--- 122 (174)
.......+...|+..++.+.......+..+... ..+..+.+.++ +|. .. |. .+.+.+.
T Consensus 15 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~D~~l~~~~~~--------------g~-~~~~~l~~~~ 78 (136)
T 3kto_A 15 QKDARAALSKLLSPLDVTIQCFASAESFMRQQI-SDDAIGMIIEAHLEDKKDS--------------GI-ELLETLVKRG 78 (136)
T ss_dssp CHHHHHHHHHHHTTSSSEEEEESSHHHHTTSCC-CTTEEEEEEETTGGGBTTH--------------HH-HHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHh-ccCCCEEEEeCcCCCCCcc--------------HH-HHHHHHHhCC
Confidence 455567777778877887775443322111101 22334555554 232 11 11 2223232
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|+|++--..+... .....+.|+--.+. +.++.++|..++++++.
T Consensus 79 ~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 79 FHLPTIVMASSSDIPT-AVRAMRASAADFIE-KPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp CCCCEEEEESSCCHHH-HHHHHHTTCSEEEE-SSBCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHH-HHHHHHcChHHhee-CCCCHHHHHHHHHHHHh
Confidence 3678888865444333 34445677766664 45789999999998874
No 154
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=39.38 E-value=80 Score=25.99 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=48.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCcccccc-CCC-CCEEEeecCCch-hh-------hcCCCccEEEecCC------hhh
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNAK-TLP-DNVFIQKWYPQT-DI-------LAHPNLRLFITHGG------ISS 116 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~-~nv~~~~~~p~~-~~-------l~~~~~~~~I~hgG------~~t 116 (174)
.+.+++.|.+.|.+.++.+.+.....+... ... +.++++.-.... .. ....+..++++|.| .+.
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~g 86 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLING 86 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHTTSSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCchHHHHHHHHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHHH
Confidence 567788888888887777766443222110 111 234444433211 11 11255778999998 667
Q ss_pred HHHHHHcCCCeEecc
Q psy16939 117 LMEASSLGVPVLGVP 131 (174)
Q Consensus 117 ~~eal~~g~P~i~vP 131 (174)
+.+|-..++|+|++.
T Consensus 87 l~~A~~~~vPll~It 101 (590)
T 1v5e_A 87 LYDAAMDNIPVVAIL 101 (590)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCEEEEc
Confidence 899999999999994
No 155
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=39.29 E-value=67 Score=19.82 Aligned_cols=106 Identities=9% Similarity=-0.112 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHhhCC-CcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---c
Q psy16939 49 SEETKLGFLEVFKQLK-LPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---L 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~ 123 (174)
.......+...|+..+ +.+.......+..+... ..+..+.+.++ +|...-+ . +.+.+. .
T Consensus 23 ~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~-~~~~dlvi~D~~l~~~~g~--------------~-~~~~l~~~~~ 86 (135)
T 3snk_A 23 DPNFKRDVATRLDALAIYDVRVSETDDFLKGPPA-DTRPGIVILDLGGGDLLGK--------------P-GIVEARALWA 86 (135)
T ss_dssp CHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCT-TCCCSEEEEEEETTGGGGS--------------T-THHHHHGGGT
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHh-ccCCCEEEEeCCCCCchHH--------------H-HHHHHHhhCC
Confidence 4555677777888888 77775544433221111 23445666664 4433222 1 222222 2
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
.+|+|++-...+.. ......+.|+--.+. +.++.++|..++++++..
T Consensus 87 ~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 87 TVPLIAVSDELTSE-QTRVLVRMNASDWLH-KPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp TCCEEEEESCCCHH-HHHHHHHTTCSEEEE-SSCCHHHHHHHHHHTC--
T ss_pred CCcEEEEeCCCCHH-HHHHHHHcCcHhhcc-CCCCHHHHHHHHHHHhcc
Confidence 68888886544433 334455677766664 357899999999998764
No 156
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=39.17 E-value=10 Score=25.87 Aligned_cols=91 Identities=12% Similarity=0.061 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCcCCCCCCHH-HHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee-cCCchhhhcCCCccEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEE-TKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK-WYPQTDILAHPNLRLFI 109 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~-~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~-~~p~~~~l~~~~~~~~I 109 (174)
+..||++..-... .... .++++.+.|+..+ .++ ......+............-.. +......+ .+||++|
T Consensus 11 ~~kVYLAGp~~~~---~~~~~~~~~i~~~l~~~G-~V~--~~~~~~p~~~~~g~~~~~~~~~i~~~d~~~i--~~aD~vv 82 (165)
T 2khz_A 11 PCSVYFCGSIRGG---REDQALYARIVSRLRRYG-KVL--TEHVADAELEPLGEEAAGGDQFIHEQDLNWL--QQADVVV 82 (165)
T ss_dssp CCEEEEECCCSSC---SHHHHHHHHHHHHHHHHS-EES--GGGTTTTSSSCCSTTSTTCHHHHHHHHHHHH--HHCSEEE
T ss_pred CeEEEEECCCCCc---HHHHHHHHHHHHHHHhcC-Ccc--cccccCchhhccccccccCHHHHHHHHHHHH--HhCCEEE
Confidence 4578887655432 1223 5788999999888 654 2221112100000000000000 11122334 6799987
Q ss_pred ecC---ChhhHHHH---HHcCCCeEec
Q psy16939 110 THG---GISSLMEA---SSLGVPVLGV 130 (174)
Q Consensus 110 ~hg---G~~t~~ea---l~~g~P~i~v 130 (174)
--. ..||..|. .+.|+|++++
T Consensus 83 a~~~~~d~Gt~~EiGyA~algKPVi~l 109 (165)
T 2khz_A 83 AEVTQPSLGVGYELGRAVALGKPILCL 109 (165)
T ss_dssp EECSSCCHHHHHHHHHHHHTCSSEEEE
T ss_pred EECCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 655 78999996 7789999998
No 157
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=39.09 E-value=66 Score=20.51 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=26.3
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
-||+.|.|. ++.+.++...+.+.|.++++.+...
T Consensus 3 qifvvfssd-------peilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSSD-------PEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEESC-------HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecCC-------HHHHHHHHHHHHhCCeEEEEEecCc
Confidence 356666544 7789999999999999988887653
No 158
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=38.77 E-value=83 Score=21.98 Aligned_cols=36 Identities=14% Similarity=-0.024 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
-|.|.|-+||.. .....++....|+..+.++-+.+-
T Consensus 13 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~ 48 (183)
T 1o4v_A 13 VPRVGIIMGSDS-----DLPVMKQAAEILEEFGIDYEITIV 48 (183)
T ss_dssp -CEEEEEESCGG-----GHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEeccHH-----HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 477888888874 578899999999999886544443
No 159
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=38.38 E-value=49 Score=22.61 Aligned_cols=68 Identities=12% Similarity=0.001 Sum_probs=38.9
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe--ecCC-chhhhcCCCccEEEe
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ--KWYP-QTDILAHPNLRLFIT 110 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~--~~~p-~~~~l~~~~~~~~I~ 110 (174)
.|+|+.||... -..+++.|.+.+++++...+...... ....++.+. +..+ ....+ ..+|++|+
T Consensus 2 kvlVtGatG~i--------G~~l~~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~~~D~~d~~~~~~--~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIGATGRA--------GSRILEEAKNRGHEVTAIVRNAGKIT----QTHKDINILQKDIFDLTLSDL--SDQNVVVD 67 (221)
T ss_dssp EEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESCSHHHH----HHCSSSEEEECCGGGCCHHHH--TTCSEEEE
T ss_pred eEEEEcCCchh--------HHHHHHHHHhCCCEEEEEEcCchhhh----hccCCCeEEeccccChhhhhh--cCCCEEEE
Confidence 47787777643 45566667777888877766432110 111233332 2222 22455 67999999
Q ss_pred cCChh
Q psy16939 111 HGGIS 115 (174)
Q Consensus 111 hgG~~ 115 (174)
-+|..
T Consensus 68 ~ag~~ 72 (221)
T 3ew7_A 68 AYGIS 72 (221)
T ss_dssp CCCSS
T ss_pred CCcCC
Confidence 99863
No 160
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=37.52 E-value=82 Score=20.94 Aligned_cols=50 Identities=14% Similarity=0.085 Sum_probs=27.3
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCC----HHHHHHHHHHHhhCCCcEEEEe
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLS----EETKLGFLEVFKQLKLPIFWKI 71 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~----~~~~~~i~~~l~~~~~~~i~~~ 71 (174)
.+.+.+...+..+|++.+|+-......+ .+.++++++.+...+.++++..
T Consensus 53 ~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 53 RLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3444443322367888888765421122 2346666677766666666543
No 161
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=36.46 E-value=71 Score=23.07 Aligned_cols=33 Identities=3% Similarity=-0.143 Sum_probs=24.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
.++++|+.||.+. -..+.+.|.+.+++++....
T Consensus 28 gk~vlVTGas~gI--------G~aia~~la~~G~~V~~~~r 60 (266)
T 3uxy_A 28 GKVALVTGAAGGI--------GGAVVTALRAAGARVAVADR 60 (266)
T ss_dssp TCEEEESSTTSHH--------HHHHHHHHHHTTCEEEECSS
T ss_pred CCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEeC
Confidence 4789999888753 55677777888988776544
No 162
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=36.37 E-value=21 Score=26.51 Aligned_cols=35 Identities=11% Similarity=-0.066 Sum_probs=26.1
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
..++++|+.||.+. -..+++.|.+.++++++....
T Consensus 30 ~gk~vlVTGas~gI--------G~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 30 DGRAAVVTGGASGI--------GLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TTCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 35789999988753 556777777889988776654
No 163
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=36.32 E-value=59 Score=24.59 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=60.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCC--CccccccCCCCCEEEeecCCchhhhcCCCccEE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITN--DPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLF 108 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~--~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~ 108 (174)
++.+|..|.++. ..+.++.+. +.+++..+.... ..++.+ .. ++ ..+-+..+++..+.+|++
T Consensus 15 rvgiiG~G~~g~----------~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~-~~--~~--~~~~~~~~ll~~~~~D~V 79 (354)
T 3q2i_A 15 RFALVGCGRIAN----------NHFGALEKHADRAELIDVCDIDPAALKAAVE-RT--GA--RGHASLTDMLAQTDADIV 79 (354)
T ss_dssp EEEEECCSTTHH----------HHHHHHHHTTTTEEEEEEECSSHHHHHHHHH-HH--CC--EEESCHHHHHHHCCCSEE
T ss_pred eEEEEcCcHHHH----------HHHHHHHhCCCCeEEEEEEcCCHHHHHHHHH-Hc--CC--ceeCCHHHHhcCCCCCEE
Confidence 577888887742 344556655 345555554321 111111 11 22 334566777765689988
Q ss_pred EecCCh----hhHHHHHHcCCCeEec-cccc---hHHHHHHHHHHcCceeEec
Q psy16939 109 ITHGGI----SSLMEASSLGVPVLGV-PFFG---DQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 109 I~hgG~----~t~~eal~~g~P~i~v-P~~~---dQ~~na~~l~~~G~g~~l~ 153 (174)
+----. ..+.+++.+|+++++= |... |-.......++.|.-+.+.
T Consensus 80 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 80 ILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 864443 3467789999998875 7532 3333445556677766654
No 164
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=36.06 E-value=83 Score=19.94 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=33.0
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEE
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFW 69 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~ 69 (174)
.+++.+++....-..|+++.++. .....+++++.+...+.++.+
T Consensus 54 ~~~l~~~~~~~~id~viia~~~~------~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 54 PKYLERLIKKHCISTVLLAVPSA------SQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp GGGHHHHHHHHTCCEEEECCTTS------CHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC------CHHHHHHHHHHHHHcCCeEEE
Confidence 45788887765535788888765 456788999999999988665
No 165
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=35.30 E-value=51 Score=24.62 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=29.9
Q ss_pred HHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHH---HhhCCCcEEEEecC
Q psy16939 24 QQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEV---FKQLKLPIFWKIDI 73 (174)
Q Consensus 24 ~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~---l~~~~~~~i~~~~~ 73 (174)
..|+.....+.+++-+|+.... ..+.+..+++. +.+.+.++++++++
T Consensus 28 ~pyi~~~~~k~iVIKlGGs~l~---~~~~~~~~~~~i~~l~~~G~~vViVhGg 77 (298)
T 2rd5_A 28 LPFIQKFRGKTIVVKYGGAAMT---SPELKSSVVSDLVLLACVGLRPILVHGG 77 (298)
T ss_dssp HHHHHHTTTCEEEEEECTHHHH---CHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhcCCEEEEEECchhhC---ChhHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 3345555557899999998652 34444555544 44567888887776
No 166
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.26 E-value=99 Score=20.62 Aligned_cols=69 Identities=10% Similarity=-0.041 Sum_probs=39.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEe--ecCCch---hhhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQ--KWYPQT---DILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~--~~~p~~---~~l~~~~~~ 106 (174)
+.|+|+.||... -..+++.|.+.+++++...+... ... ....++.+. +..+.. ..+ ..+|
T Consensus 4 ~~ilVtGatG~i--------G~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~--~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQT--------GLTTLAQAVQAGYEVTVLVRDSSRLPS----EGPRPAHVVVGDVLQAADVDKTV--AGQD 69 (206)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESCGGGSCS----SSCCCSEEEESCTTSHHHHHHHH--TTCS
T ss_pred CEEEEEcCCcHH--------HHHHHHHHHHCCCeEEEEEeChhhccc----ccCCceEEEEecCCCHHHHHHHH--cCCC
Confidence 468888776643 45556666667888777665432 111 112344333 223322 334 5789
Q ss_pred EEEecCChh
Q psy16939 107 LFITHGGIS 115 (174)
Q Consensus 107 ~~I~hgG~~ 115 (174)
.+|+-+|..
T Consensus 70 ~vi~~a~~~ 78 (206)
T 1hdo_A 70 AVIVLLGTR 78 (206)
T ss_dssp EEEECCCCT
T ss_pred EEEECccCC
Confidence 999998854
No 167
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=35.05 E-value=98 Score=20.50 Aligned_cols=104 Identities=12% Similarity=0.003 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHH---HcC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEAS---SLG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal---~~g 124 (174)
.......+...|...++.+.....+...-+... ..+..+.+.++ +|..+ |.. +.+.+ ...
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvl~D~~lp~~~--------------g~~-~~~~l~~~~~~ 79 (184)
T 3rqi_A 16 NEVFAGTLARGLERRGYAVRQAHNKDEALKLAG-AEKFEFITVXLHLGNDS--------------GLS-LIAPLCDLQPD 79 (184)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHT-TSCCSEEEECSEETTEE--------------SHH-HHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHh-hCCCCEEEEeccCCCcc--------------HHH-HHHHHHhcCCC
Confidence 455566677777777877654433322111111 23345666654 33221 222 22222 235
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
+|+|++.-..+... ....-+.|+--.+. +.++.++|..++++++
T Consensus 80 ~~ii~lt~~~~~~~-~~~a~~~Ga~~~l~-KP~~~~~L~~~i~~~~ 123 (184)
T 3rqi_A 80 ARILVLTGYASIAT-AVQAVKDGADNYLA-KPANVESILAALQTNA 123 (184)
T ss_dssp CEEEEEESSCCHHH-HHHHHHHTCSEEEE-SSCCHHHHHHHTSTTH
T ss_pred CCEEEEeCCCCHHH-HHHHHHhCHHHhee-CCCCHHHHHHHHHHHH
Confidence 66666654433322 33334555544443 3456777777766544
No 168
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=34.27 E-value=54 Score=23.55 Aligned_cols=90 Identities=10% Similarity=-0.016 Sum_probs=47.9
Q ss_pred HhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCcc
Q psy16939 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLR 106 (174)
Q Consensus 27 ~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~ 106 (174)
++..++++++|..|.. ....+..|.+.+..+.+...... +++.+.....++.+..---....| ..+|
T Consensus 27 l~L~gk~VLVVGgG~v----------a~~ka~~Ll~~GA~VtVvap~~~-~~l~~l~~~~~i~~i~~~~~~~dL--~~ad 93 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTI----------ATRRIKGFLQEGAAITVVAPTVS-AEINEWEAKGQLRVKRKKVGEEDL--LNVF 93 (223)
T ss_dssp ECCTTCCEEEECCSHH----------HHHHHHHHGGGCCCEEEECSSCC-HHHHHHHHTTSCEEECSCCCGGGS--SSCS
T ss_pred EEcCCCEEEEECCCHH----------HHHHHHHHHHCCCEEEEECCCCC-HHHHHHHHcCCcEEEECCCCHhHh--CCCC
Confidence 3344466777766654 33445667777888777654321 211100011234443322223335 6799
Q ss_pred EEEecCChhhHHHHHHc----CCCeEe
Q psy16939 107 LFITHGGISSLMEASSL----GVPVLG 129 (174)
Q Consensus 107 ~~I~hgG~~t~~eal~~----g~P~i~ 129 (174)
++|.--|...+.+.++. |+|+-+
T Consensus 94 LVIaAT~d~~~N~~I~~~ak~gi~VNv 120 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQHIKNDQLVNM 120 (223)
T ss_dssp EEEECCCCTHHHHHHHHHSCTTCEEEC
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence 99999887766665553 555433
No 169
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=33.98 E-value=1.1e+02 Score=20.81 Aligned_cols=47 Identities=9% Similarity=0.074 Sum_probs=29.1
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|+|++--..+.........+.|+--.+.+ .++ +|..+|++++..
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K-P~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQAGMDAFLDK-SLN--QLANVIREIESK 196 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHHTCSEEEET-TCT--THHHHHHHHC--
T ss_pred CCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC-cHH--HHHHHHHHHHhh
Confidence 46899988765523344455556777655543 344 888888888754
No 170
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.95 E-value=46 Score=24.01 Aligned_cols=35 Identities=6% Similarity=-0.126 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
.++++|+.||.+. -..+.+.|.+.+++++......
T Consensus 27 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 27 SAPILITGASQRV--------GLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCCEEESSTTSHH--------HHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCCh
Confidence 4789999888753 5567777888899988776653
No 171
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=33.81 E-value=1.4e+02 Score=22.09 Aligned_cols=105 Identities=8% Similarity=0.021 Sum_probs=59.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC--CccccccCCCCCEEEeecCCchhhhcCCCccEEE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN--DPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFI 109 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~--~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I 109 (174)
++.+|..|.++ ...+..+.+. +.+++..+.... ..++.+ .. ++. +-+..+++..+.+|+++
T Consensus 5 ~vgiiG~G~~g----------~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~-~~--~~~---~~~~~~~l~~~~~D~V~ 68 (331)
T 4hkt_A 5 RFGLLGAGRIG----------KVHAKAVSGNADARLVAVADAFPAAAEAIAG-AY--GCE---VRTIDAIEAAADIDAVV 68 (331)
T ss_dssp EEEEECCSHHH----------HHHHHHHHHCTTEEEEEEECSSHHHHHHHHH-HT--TCE---ECCHHHHHHCTTCCEEE
T ss_pred EEEEECCCHHH----------HHHHHHHhhCCCcEEEEEECCCHHHHHHHHH-Hh--CCC---cCCHHHHhcCCCCCEEE
Confidence 45667776653 2345556655 345554444321 111111 11 232 55677788666899998
Q ss_pred ecCC----hhhHHHHHHcCCCeEec-ccc--chH-HHHHHHHHHcCceeEec
Q psy16939 110 THGG----ISSLMEASSLGVPVLGV-PFF--GDQ-YRNMVLLRHRGYALIEP 153 (174)
Q Consensus 110 ~hgG----~~t~~eal~~g~P~i~v-P~~--~dQ-~~na~~l~~~G~g~~l~ 153 (174)
.--- ...+.+++.+|+++++= |.. .++ ..-....++.|.-+.+.
T Consensus 69 i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 69 ICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 6443 34467889999998874 753 233 33445556678777654
No 172
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=33.23 E-value=1.2e+02 Score=23.11 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=39.7
Q ss_pred cCCchhhhcCCCccEEEecCC----hhhHHHHHHcCCCeEec-cccc--hHH-HHHHHHHHcCceeEec
Q psy16939 93 WYPQTDILAHPNLRLFITHGG----ISSLMEASSLGVPVLGV-PFFG--DQY-RNMVLLRHRGYALIEP 153 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG----~~t~~eal~~g~P~i~v-P~~~--dQ~-~na~~l~~~G~g~~l~ 153 (174)
|-+..+++..+..|+++--.. ...+.+|+.+|+++++= |... ++. .-....++.|.-+.+.
T Consensus 72 ~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~ 140 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTV 140 (383)
T ss_dssp ESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 356778887778998875333 55678999999998753 7632 333 3344455677765553
No 173
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=33.14 E-value=84 Score=19.17 Aligned_cols=48 Identities=13% Similarity=0.192 Sum_probs=32.2
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+|++++....+... .....+.|+--.+. +.++.++|..++++++...
T Consensus 81 ~~pii~~s~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~L~~~l~~~l~~~ 128 (129)
T 3h1g_A 81 EIPIIMITAEGGKAE-VITALKAGVNNYIV-KPFTPQVLKEKLEVVLGTN 128 (129)
T ss_dssp TCCEEEEESCCSHHH-HHHHHHHTCCEEEE-SCCCHHHHHHHHHHHHCCC
T ss_pred CCeEEEEeCCCChHH-HHHHHHcCccEEEe-CCCCHHHHHHHHHHHhccC
Confidence 578888865444433 33444567655554 4578999999999998653
No 174
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=33.02 E-value=56 Score=24.77 Aligned_cols=47 Identities=13% Similarity=0.028 Sum_probs=30.1
Q ss_pred HHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHH---HhhCCCcEEEEecC
Q psy16939 24 QQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEV---FKQLKLPIFWKIDI 73 (174)
Q Consensus 24 ~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~---l~~~~~~~i~~~~~ 73 (174)
..|+.....+.++|-+|+... ...+.+..+++. +.+.+.+++++.++
T Consensus 41 ~pyi~~~~~k~iVIKlGGs~l---~~~~~~~~l~~~i~~l~~~G~~vVlVhGg 90 (321)
T 2v5h_A 41 LPYLQQFAGRTVVVKYGGAAM---KQEELKEAVMRDIVFLACVGMRPVVVHGG 90 (321)
T ss_dssp HHHHHHTTTCEEEEEECTHHH---HSHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhCCCeEEEEECchhh---CCchHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 334555555789999999865 234445555544 44567888888776
No 175
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=32.91 E-value=1.6e+02 Score=22.25 Aligned_cols=69 Identities=3% Similarity=-0.253 Sum_probs=38.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEE--eecCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFI--QKWYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~--~~~~p~~---~~l~~~~~~~ 107 (174)
+.|+|+.||... -..+++.|.+.+++++........... ....++.+ .+..+.. .++ ..+|+
T Consensus 30 ~~vlVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~ 96 (379)
T 2c5a_A 30 LKISITGAGGFI--------ASHIARRLKHEGHYVIASDWKKNEHMT---EDMFCDEFHLVDLRVMENCLKVT--EGVDH 96 (379)
T ss_dssp CEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSCCSSSC---GGGTCSEEEECCTTSHHHHHHHH--TTCSE
T ss_pred CeEEEECCccHH--------HHHHHHHHHHCCCeEEEEECCCccchh---hccCCceEEECCCCCHHHHHHHh--CCCCE
Confidence 579999887653 344555566668887776654321110 11123332 2333322 344 57999
Q ss_pred EEecCCh
Q psy16939 108 FITHGGI 114 (174)
Q Consensus 108 ~I~hgG~ 114 (174)
+||-+|.
T Consensus 97 Vih~A~~ 103 (379)
T 2c5a_A 97 VFNLAAD 103 (379)
T ss_dssp EEECCCC
T ss_pred EEECcee
Confidence 9999884
No 176
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=32.90 E-value=90 Score=19.41 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHhhCCCcE--EEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---
Q psy16939 49 SEETKLGFLEVFKQLKLPI--FWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS--- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~--i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~--- 122 (174)
.......+...|...++.+ ..........+... ..+..+.+.++ +|... |. .+.+.+.
T Consensus 14 ~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~-~~~~dlii~D~~l~~~~--------------g~-~~~~~lr~~~ 77 (144)
T 3kht_A 14 NPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQ-QAKYDLIILDIGLPIAN--------------GF-EVMSAVRKPG 77 (144)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHT-TCCCSEEEECTTCGGGC--------------HH-HHHHHHHSSS
T ss_pred CHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhh-cCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcc
Confidence 3455667777788888763 33222221111111 23345555554 22211 11 3344444
Q ss_pred --cCCCeEeccccchHHHHHHHHHHcCceeEecCCCC-CHHHHHHHHHHhhc
Q psy16939 123 --LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL-TKQSFLKNAQTMLN 171 (174)
Q Consensus 123 --~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~-~~~~l~~al~~ll~ 171 (174)
..+|+|++-...+... .....+.|+--.+.+ .. +.++|..+|++++.
T Consensus 78 ~~~~~pii~~s~~~~~~~-~~~~~~~ga~~~l~K-p~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 78 ANQHTPIVILTDNVSDDR-AKQCMAAGASSVVDK-SSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTTTCCEEEEETTCCHHH-HHHHHHTTCSEEEEC-CTTSHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHH-HHHHHHcCCCEEEEC-CCCcHHHHHHHHHHHHH
Confidence 3688888865444333 344456777766653 45 88999999988763
No 177
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=32.83 E-value=1.1e+02 Score=23.25 Aligned_cols=48 Identities=13% Similarity=0.005 Sum_probs=30.6
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+-++..++..-+++|+-++|+... +..+...+.++..+.+..++....
T Consensus 230 ~~l~~~~~~g~~GiVle~~G~Gn~----p~~~~~~l~~a~~~~gi~VV~~Sr 277 (331)
T 1agx_A 230 DAYQAFAKAGVKAIIHAGTGNGSM----ANYLVPEVRKLHDEQGLQIVRSSR 277 (331)
T ss_dssp HHHHHHHTTTCSEEEEEEBTTTBC----CTTHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHhCCCCEEEEeeECCCCC----CHHHHHHHHHHHHcCCCEEEEECC
Confidence 334454443238999999999875 566666666665255666666554
No 178
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=32.77 E-value=89 Score=19.32 Aligned_cols=106 Identities=8% Similarity=0.079 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHH---HcCC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEAS---SLGV 125 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal---~~g~ 125 (174)
.......+...|+..++.+..........+... .....+.+.++.|...- . .+.+.+ ...+
T Consensus 13 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~d~~~~~~g--------------~-~~~~~l~~~~~~~ 76 (142)
T 2qxy_A 13 SRITFLAVKNALEKDGFNVIWAKNEQEAFTFLR-REKIDLVFVDVFEGEES--------------L-NLIRRIREEFPDT 76 (142)
T ss_dssp CHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHT-TSCCSEEEEECTTTHHH--------------H-HHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHh-ccCCCEEEEeCCCCCcH--------------H-HHHHHHHHHCCCC
Confidence 355566777778777887765433222111111 22345555554322211 1 122222 2368
Q ss_pred CeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 126 PVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 126 P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|+|++-...+ ........+.|+--.+. +.++.++|..++++++..
T Consensus 77 pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 77 KVAVLSAYVD-KDLIINSVKAGAVDYIL-KPFRLDYLLERVKKIISS 121 (142)
T ss_dssp EEEEEESCCC-HHHHHHHHHHTCSCEEE-SSCCHHHHHHHHHHHHHC
T ss_pred CEEEEECCCC-HHHHHHHHHCCcceeEe-CCCCHHHHHHHHHHHHhh
Confidence 8888855444 33344555667665554 356889999999988754
No 179
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=32.50 E-value=1.1e+02 Score=21.84 Aligned_cols=58 Identities=9% Similarity=0.112 Sum_probs=41.9
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEee
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~ 92 (174)
.++++++++..+-..++++..|.. .+++.+.+...|.+-||-..+..+. .|+++.+..
T Consensus 137 ~~dL~~~v~~~~Id~vIIAvPs~~---------aq~v~d~lv~~GIk~I~nFap~~l~------vp~~v~v~~ 194 (212)
T 3keo_A 137 ISTINDHLIDSDIETAILTVPSTE---------AQEVADILVKAGIKGILSFSPVHLT------LPKDIIVQY 194 (212)
T ss_dssp GGGHHHHC-CCSCCEEEECSCGGG---------HHHHHHHHHHHTCCEEEECSSSCCC------CCTTSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchh---------HHHHHHHHHHcCCCEEEEcCCcccC------CCCCcEEEE
Confidence 467888888766568888886652 4678888888999999988766543 566655543
No 180
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.19 E-value=97 Score=19.57 Aligned_cols=105 Identities=11% Similarity=0.091 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHH---HcC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEAS---SLG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal---~~g 124 (174)
.......+...|...++.+.............. ..+..+.+.++ +|... |. .+.+.+ ...
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~d~~l~~~~--------------g~-~~~~~l~~~~~~ 79 (154)
T 2rjn_A 16 EQPILNSLKRLIKRLGCNIITFTSPLDALEALK-GTSVQLVISDMRMPEMG--------------GE-VFLEQVAKSYPD 79 (154)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHT-TSCCSEEEEESSCSSSC--------------HH-HHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHh-cCCCCEEEEecCCCCCC--------------HH-HHHHHHHHhCCC
Confidence 345566677777777877664333222111111 22345555554 22211 11 223333 236
Q ss_pred CCeEeccccchHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRG-YALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G-~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+|++-...+. .......+.| +--.+. +.++.++|..++++++.
T Consensus 80 ~~ii~ls~~~~~-~~~~~~~~~g~~~~~l~-kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 80 IERVVISGYADA-QATIDAVNRGKISRFLL-KPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp SEEEEEECGGGH-HHHHHHHHTTCCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCH-HHHHHHHhccchheeee-CCCCHHHHHHHHHHHHH
Confidence 788877544443 3333444455 544443 34678888888887753
No 181
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.99 E-value=49 Score=23.72 Aligned_cols=35 Identities=9% Similarity=-0.068 Sum_probs=25.3
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
..++++|+.|+.+. -..+++.|.+.+++++.....
T Consensus 28 ~~k~vlITGas~gI--------G~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 28 SGQVAVVTGASRGI--------GAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TTCEEEESSTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChH--------HHHHHHHHHHCCCEEEEEECC
Confidence 34789999888753 456677777789987776554
No 182
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=31.96 E-value=94 Score=21.73 Aligned_cols=130 Identities=17% Similarity=0.123 Sum_probs=69.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--CC--cc-ccccCCCCCEEEeec-C-----Cchhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--ND--PV-LNAKTLPDNVFIQKW-Y-----PQTDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--~~--~~-~~~~~~~~nv~~~~~-~-----p~~~~l 100 (174)
+++++.-.||...- ...++++.|.+.+..+-+..... .+ ++ + + .+..+ .+.+. - .+-.+.
T Consensus 9 k~IllgvTGs~aa~------k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~-~-~l~~~-v~~~~~~~~~~~~hi~l~ 79 (194)
T 1p3y_1 9 KKLLIGICGSISSV------GISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTV-S-YFCDH-VYSEHGENGKRHSHVEIG 79 (194)
T ss_dssp CEEEEEECSCGGGG------GTHHHHHHHTTTSSEEEEEECHHHHHHSCHHHH-G-GGSSE-EECTTCSSSCCCCHHHHH
T ss_pred CEEEEEEECHHHHH------HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHH-H-HhcCC-EeccccccCCCcCccccc
Confidence 35666666776541 13456666666676554443321 11 00 1 1 23444 23332 1 122222
Q ss_pred cCCCccE-EEecCChhhHHH-------------HHHcCCCeEeccccc----h---HHHHHHHHHHcCceeEec-CC---
Q psy16939 101 AHPNLRL-FITHGGISSLME-------------ASSLGVPVLGVPFFG----D---QYRNMVLLRHRGYALIEP-IQ--- 155 (174)
Q Consensus 101 ~~~~~~~-~I~hgG~~t~~e-------------al~~g~P~i~vP~~~----d---Q~~na~~l~~~G~g~~l~-~~--- 155 (174)
..+|+ +|.-+-+||+.. ++..++|++++|... . ...|-..+.+.|+-++=. ..
T Consensus 80 --~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f 157 (194)
T 1p3y_1 80 --RWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAF 157 (194)
T ss_dssp --HHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC--
T ss_pred --ccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccc
Confidence 34664 555566665543 255789999999632 1 356788888888754411 11
Q ss_pred ------------CCCHHHHHHHHHHhhcC
Q psy16939 156 ------------TLTKQSFLKNAQTMLND 172 (174)
Q Consensus 156 ------------~~~~~~l~~al~~ll~~ 172 (174)
-.+.+++.+.+.+.+.+
T Consensus 158 ~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 158 EIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp ----------CBCCCHHHHHHHHHHHCC-
T ss_pred ccccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 13678888888877654
No 183
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=31.51 E-value=1.7e+02 Score=22.14 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=40.2
Q ss_pred cCCchhhhcCCCccEEEecCChh----hHHHHHHcCCCeEec-ccc--chHH-HHHHHHHHcCceeEec
Q psy16939 93 WYPQTDILAHPNLRLFITHGGIS----SLMEASSLGVPVLGV-PFF--GDQY-RNMVLLRHRGYALIEP 153 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~----t~~eal~~g~P~i~v-P~~--~dQ~-~na~~l~~~G~g~~l~ 153 (174)
|-+..+++..+.+|+++----.. .+.+|+.+|+++++= |+. .++. .-....++.|.-+.+.
T Consensus 54 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 54 VRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp ESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 35678888767799988755433 477899999998874 753 2333 3334445567766554
No 184
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=31.47 E-value=1.1e+02 Score=19.93 Aligned_cols=113 Identities=8% Similarity=-0.025 Sum_probs=62.3
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
...+..++.... .+.+|..|... ...-..+++.|.+.+++ +|-.++.. .+ . .++..++. ..++
T Consensus 12 ~~~l~~ll~~p~-~iaVVGas~~~------g~~G~~~~~~l~~~G~~-v~~Vnp~~-~~-----i-~G~~~y~s--l~~l 74 (144)
T 2d59_A 12 DEDIREILTRYK-KIALVGASPKP------ERDANIVMKYLLEHGYD-VYPVNPKY-EE-----V-LGRKCYPS--VLDI 74 (144)
T ss_dssp HHHHHHHHHHCC-EEEEETCCSCT------TSHHHHHHHHHHHTTCE-EEEECTTC-SE-----E-TTEECBSS--GGGC
T ss_pred HHHHHHHHcCCC-EEEEEccCCCC------CchHHHHHHHHHHCCCE-EEEECCCC-Ce-----E-CCeeccCC--HHHc
Confidence 456778775443 77777665432 22344555667778887 55554432 21 1 12222221 2222
Q ss_pred hcCCCccEEEecCCh----hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE
Q psy16939 100 LAHPNLRLFITHGGI----SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151 (174)
Q Consensus 100 l~~~~~~~~I~hgG~----~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~ 151 (174)
- ..+|++|--=-. ..+-|++..|++.+++-....+..-++.+++.|+-++
T Consensus 75 ~--~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 75 P--DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIV 128 (144)
T ss_dssp S--SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred C--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEEE
Confidence 2 246655543332 3355677889998876444456677777888887644
No 185
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=30.93 E-value=2.1e+02 Score=23.33 Aligned_cols=78 Identities=6% Similarity=-0.014 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCch-hhh-------cCCCccEEEecCChhh------
Q psy16939 52 TKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQT-DIL-------AHPNLRLFITHGGISS------ 116 (174)
Q Consensus 52 ~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~-~~l-------~~~~~~~~I~hgG~~t------ 116 (174)
..+.+++.|.+.|.+.++.+.+.. ...+.. .+.+ ++++.-.... ..+ ...+..++++|.|.|.
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~-al~~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~ 91 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAASILFD-EVEG-IDFVLTRHEFTAGVAADVLARITGRPQACWATLGPGMTNLSTG 91 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGGTCCSC-SSTT-CEEEECSSHHHHHHHHHHHHHHHCSCEEEEECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcchhHHHH-HHcC-CeEEeeCCHHHHHHHHHHHHHHHCCCEEEEEccCchHHHHHHH
Confidence 478889999999998777776644 322222 2222 5555433211 110 0156778999999654
Q ss_pred HHHHHHcCCCeEecc
Q psy16939 117 LMEASSLGVPVLGVP 131 (174)
Q Consensus 117 ~~eal~~g~P~i~vP 131 (174)
+.||-+.++|+|++.
T Consensus 92 v~~A~~~~~Pll~it 106 (573)
T 2iht_A 92 IATSVLDRSPVIALA 106 (573)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHhhCCCEEEEc
Confidence 779999999999994
No 186
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.79 E-value=1e+02 Score=19.44 Aligned_cols=105 Identities=16% Similarity=0.103 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHH---HcC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEAS---SLG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal---~~g 124 (174)
.......+...|...++.+.......+..+... ..+..+.+.++ +|... |. .+.+.+ ...
T Consensus 23 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~ 86 (153)
T 3hv2_A 23 QEVILQRLQQLLSPLPYTLHFARDATQALQLLA-SREVDLVISAAHLPQMD--------------GP-TLLARIHQQYPS 86 (153)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHH-HSCCSEEEEESCCSSSC--------------HH-HHHHHHHHHCTT
T ss_pred CHHHHHHHHHHhcccCcEEEEECCHHHHHHHHH-cCCCCEEEEeCCCCcCc--------------HH-HHHHHHHhHCCC
Confidence 455567777788877777665433322111111 22345666654 33221 11 222222 346
Q ss_pred CCeEeccccchHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRG-YALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G-~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+|++-...+... .....+.| +--.+. +.++.++|..++++++.
T Consensus 87 ~~ii~~s~~~~~~~-~~~~~~~g~~~~~l~-KP~~~~~l~~~i~~~l~ 132 (153)
T 3hv2_A 87 TTRILLTGDPDLKL-IAKAINEGEIYRYLS-KPWDDQELLLALRQALE 132 (153)
T ss_dssp SEEEEECCCCCHHH-HHHHHHTTCCSEEEC-SSCCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCHHH-HHHHHhCCCcceEEe-CCCCHHHHHHHHHHHHH
Confidence 78887765444433 34445566 544553 45688999999988764
No 187
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.68 E-value=89 Score=18.68 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=32.0
Q ss_pred HcCCCeEeccccchHHHHHH---HHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 122 SLGVPVLGVPFFGDQYRNMV---LLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 122 ~~g~P~i~vP~~~dQ~~na~---~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
-.|+|.++.-..+.|...-. ...+.|+..-+.+ ...+++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlk-stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK-STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE-CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc-cCCHHHHHHHHHHHHH
Confidence 46999998876665554322 2234577765543 3478999988888764
No 188
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=30.57 E-value=1.3e+02 Score=20.55 Aligned_cols=71 Identities=7% Similarity=-0.079 Sum_probs=41.4
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hCCCcEEEEecCCC--CccccccCCCCCEEEee--cCCch---hhhcCCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFK-QLKLPIFWKIDITN--DPVLNAKTLPDNVFIQK--WYPQT---DILAHPN 104 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~~~~~i~~~~~~~--~~~~~~~~~~~nv~~~~--~~p~~---~~l~~~~ 104 (174)
+.|+|+.||... -..+++.|. +.+++++....... ..++. ....++.... ..+.. ..+ ..
T Consensus 6 k~vlVtGasg~i--------G~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~--~~ 73 (221)
T 3r6d_A 6 XYITILGAAGQI--------AQXLTATLLTYTDMHITLYGRQLKTRIPPEI--IDHERVTVIEGSFQNPGXLEQAV--TN 73 (221)
T ss_dssp SEEEEESTTSHH--------HHHHHHHHHHHCCCEEEEEESSHHHHSCHHH--HTSTTEEEEECCTTCHHHHHHHH--TT
T ss_pred EEEEEEeCCcHH--------HHHHHHHHHhcCCceEEEEecCccccchhhc--cCCCceEEEECCCCCHHHHHHHH--cC
Confidence 568888877753 445566666 67888877665422 22110 0234444443 33322 344 67
Q ss_pred ccEEEecCChh
Q psy16939 105 LRLFITHGGIS 115 (174)
Q Consensus 105 ~~~~I~hgG~~ 115 (174)
+|++|+.+|..
T Consensus 74 ~d~vv~~ag~~ 84 (221)
T 3r6d_A 74 AEVVFVGAMES 84 (221)
T ss_dssp CSEEEESCCCC
T ss_pred CCEEEEcCCCC
Confidence 99999999864
No 189
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=30.48 E-value=1.8e+02 Score=22.11 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=31.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+-++.+++..-+++|+-++|+... +..+++.+.++. +.+..++....
T Consensus 232 ~~l~~~~~~g~~GiVle~~G~Gn~----p~~~~~~l~~a~-~~Gi~VV~~Sr 278 (327)
T 1o7j_A 232 YLYDAAIQHGVKGIVYAGMGAGSV----SVRGIAGMRKAL-EKGVVVMRSTR 278 (327)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBC----CHHHHHHHHHHH-HTTCEEEEEES
T ss_pred HHHHHHHhCCCCEEEEeeECCCCC----CHHHHHHHHHHH-HCCceEEEECC
Confidence 334455543338999999999875 677777666665 45666666554
No 190
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=30.28 E-value=81 Score=18.38 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...+...++++..........+... ..+..+.+.++ .+.. .| -.+.+.+.
T Consensus 10 ~~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~l~-~~~~dlii~d~~~~~~--------------~~-~~~~~~l~~~~~~ 73 (119)
T 2j48_A 10 EDEAATVVCEMLTAAGFKVIWLVDGSTALDQLD-LLQPIVILMAWPPPDQ--------------SC-LLLLQHLREHQAD 73 (119)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHH-HHCCSEEEEECSTTCC--------------TH-HHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHhCCcEEEEecCHHHHHHHHH-hcCCCEEEEecCCCCC--------------CH-HHHHHHHHhcccc
Confidence 345566677777777777654332222111000 11234555543 2211 11 12344443
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++++-...+.. ...+.|+--.+. +.++.+++...+++++..
T Consensus 74 ~~~~ii~~~~~~~~~----~~~~~g~~~~l~-kp~~~~~l~~~l~~~~~~ 118 (119)
T 2j48_A 74 PHPPLVLFLGEPPVD----PLLTAQASAILS-KPLDPQLLLTTLQGLCPP 118 (119)
T ss_dssp SSCCCEEEESSCCSS----HHHHHHCSEECS-SCSTTHHHHHHHHTTCCC
T ss_pred CCCCEEEEeCCCCch----hhhhcCHHHhcc-CCCCHHHHHHHHHHHhcC
Confidence 467888774433322 344556655554 356788999999887653
No 191
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=30.14 E-value=78 Score=22.97 Aligned_cols=33 Identities=3% Similarity=-0.089 Sum_probs=24.2
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||.+. -..+.+.|.+.+++++.....
T Consensus 22 k~vlVTGas~gI--------G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATSGF--------GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTTSS--------HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 689999888764 455667777788888776554
No 192
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=30.03 E-value=1.8e+02 Score=22.10 Aligned_cols=47 Identities=17% Similarity=0.075 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+-++..++..-+++|+-++|+... +..+++.+.++. +.+..++....
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~----p~~~~~~l~~a~-~~Gi~VV~~Sr 279 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNV----SAGFLKAMQEAS-QMGVVIVRSSR 279 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBC----CHHHHHHHHHHH-HTTCEEEEEES
T ss_pred HHHHHHHhCCCCEEEEeeECCCCC----CHHHHHHHHHHH-HCCCEEEEECC
Confidence 334455543338999999999864 677666666665 45666666554
No 193
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=30.02 E-value=1.1e+02 Score=21.41 Aligned_cols=69 Identities=14% Similarity=0.024 Sum_probs=38.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh-CCCcEEEEecCCCCccccccCCCCCEEEe--ecCCchh------hhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ-LKLPIFWKIDITNDPVLNAKTLPDNVFIQ--KWYPQTD------ILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~nv~~~--~~~p~~~------~l~~ 102 (174)
.++++|+.||.+. -..+.+.|.+ .+..++......... ..++... +..+... .+.+
T Consensus 4 ~k~vlITGas~gI--------G~~~a~~l~~~~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 68 (244)
T 4e4y_A 4 MANYLVTGGSKGI--------GKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIKN 68 (244)
T ss_dssp CEEEEEETTTSHH--------HHHHHHHHTTSTTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTTT
T ss_pred CCeEEEeCCCChH--------HHHHHHHHHhcCCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHHh
Confidence 3689999988754 4566777776 566666654433211 1222222 2222111 1112
Q ss_pred CCccEEEecCChh
Q psy16939 103 PNLRLFITHGGIS 115 (174)
Q Consensus 103 ~~~~~~I~hgG~~ 115 (174)
...|++|+.+|..
T Consensus 69 ~~id~lv~nAg~~ 81 (244)
T 4e4y_A 69 VSFDGIFLNAGIL 81 (244)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 4789999999963
No 194
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=29.89 E-value=37 Score=25.58 Aligned_cols=48 Identities=19% Similarity=0.158 Sum_probs=33.2
Q ss_pred hhhHHHHHHcCCCeEecccc--chHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy16939 114 ISSLMEASSLGVPVLGVPFF--GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNA 166 (174)
Q Consensus 114 ~~t~~eal~~g~P~i~vP~~--~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al 166 (174)
..|...|+..|+|+.++|-. ..+-.-...+-+.|+.++. +.+++.+.+
T Consensus 231 liTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~-----~~~Dil~el 280 (288)
T 3uqz_A 231 LITCERAMEEGRDVFAIPGSILDGLSDGCHHLIQEGAKLVT-----SGQDVLAEF 280 (288)
T ss_dssp HHHHHHHHHTTCEEEECCCCSSSSTTHHHHHHHHTTCEECS-----SHHHHHHHC
T ss_pred HHHHHHHHHcCCeEEEECCCCCCccchHHHHHHHCCCEEEC-----CHHHHHHHh
Confidence 55788999999999999853 3444555667778955543 566665543
No 195
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=29.69 E-value=97 Score=24.97 Aligned_cols=78 Identities=9% Similarity=0.041 Sum_probs=46.7
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch-hhhc-------CCCccEEEecCChh------hHH
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT-DILA-------HPNLRLFITHGGIS------SLM 118 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~~l~-------~~~~~~~I~hgG~~------t~~ 118 (174)
.+.+++.|.+.|.+.++.+.+.....+.. .+.++++++.-.... ..++ ..+..+++++.|.| .+.
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~-al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~ 83 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGSNALPFLK-DFPEDFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGALS 83 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGHHHHT-TCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcchHHHHH-HHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHH
Confidence 46678888888887777766543222211 122345544433211 1110 14567777887744 478
Q ss_pred HHHHcCCCeEecc
Q psy16939 119 EASSLGVPVLGVP 131 (174)
Q Consensus 119 eal~~g~P~i~vP 131 (174)
||-+.++|+|++.
T Consensus 84 ~A~~~~~Pll~it 96 (528)
T 1q6z_A 84 NAWNSHSPLIVTA 96 (528)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHhhcCCCEEEEe
Confidence 9999999999993
No 196
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=29.68 E-value=1.8e+02 Score=22.13 Aligned_cols=47 Identities=9% Similarity=-0.012 Sum_probs=31.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+-++..++..-+++|+-++|+... +..+++.+.++. +.+..++....
T Consensus 230 ~~l~~~~~~g~~GiVle~~G~Gn~----p~~~~~~l~~a~-~~gi~VV~~Sr 276 (330)
T 1wsa_A 230 VLVNAALQAGAKGIIHAGMGNGNP----FPLTQNALEKAA-KSGVVVARSSR 276 (330)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBC----CHHHHHHHHHHH-HTTCEEEEEES
T ss_pred HHHHHHHhCCCCEEEEeeECCCCC----CHHHHHHHHHHH-HCCCEEEEECC
Confidence 345555543338999999999875 677666666665 45666666554
No 197
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.58 E-value=1.2e+02 Score=19.68 Aligned_cols=109 Identities=6% Similarity=-0.053 Sum_probs=49.8
Q ss_pred HHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc---CCCccEEEecCChhhHHH----HHH--c
Q psy16939 54 LGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA---HPNLRLFITHGGISSLME----ASS--L 123 (174)
Q Consensus 54 ~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~---~~~~~~~I~hgG~~t~~e----al~--~ 123 (174)
..++..|...+.++++...... ...+. .......+.......+.+. ...+|++|.--+...... .+. .
T Consensus 32 ~~la~~L~~~g~~V~vid~~~~~~~~~~--~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~ 109 (155)
T 2g1u_A 32 SLIANLASSSGHSVVVVDKNEYAFHRLN--SEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMF 109 (155)
T ss_dssp HHHHHHHHHTTCEEEEEESCGGGGGGSC--TTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCCeEEEEECCHHHHHHHH--hcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHC
Confidence 3456666777887766554322 22111 0111122222222222221 146888887766543322 222 3
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+...++.-..... +...+.+.|+- ++.+ .+.....+.+.+.
T Consensus 110 ~~~~iv~~~~~~~--~~~~l~~~G~~-vi~p----~~~~a~~l~~~l~ 150 (155)
T 2g1u_A 110 NVENVIARVYDPE--KIKIFEENGIK-TICP----AVLMIEKVKEFII 150 (155)
T ss_dssp CCSEEEEECSSGG--GHHHHHTTTCE-EECH----HHHHHHHHHHHHH
T ss_pred CCCeEEEEECCHH--HHHHHHHCCCc-EEcH----HHHHHHHHHHHHh
Confidence 4444444322222 34567778888 6643 2334444444443
No 198
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=29.46 E-value=1e+02 Score=18.89 Aligned_cols=107 Identities=10% Similarity=0.043 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH----c
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----L 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~ 123 (174)
.......+...|++.++.+.................+..+.+.++ +|... |. .+.+.+. .
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~ 80 (136)
T 3hdv_A 16 NAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPES--------------GL-DLIRTIRASERA 80 (136)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCSSSC--------------HH-HHHHHHHTSTTT
T ss_pred CHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccCCCCC--------------HH-HHHHHHHhcCCC
Confidence 344566667777777887766443322111000011134444443 22111 11 3344443 3
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
.+|+|++....+. .......+.|+--.+. +.++.++|..++++++..
T Consensus 81 ~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 81 ALSIIVVSGDTDV-EEAVDVMHLGVVDFLL-KPVDLGKLLELVNKELKI 127 (136)
T ss_dssp TCEEEEEESSCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC-
T ss_pred CCCEEEEeCCCCh-HHHHHHHhCCcceEEe-CCCCHHHHHHHHHHHhcC
Confidence 4677777554443 3344555677766654 457899999999998764
No 199
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.44 E-value=1.6e+02 Score=21.36 Aligned_cols=72 Identities=8% Similarity=0.064 Sum_probs=38.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Ccc-ccc-cCCCCCEEEeecCCch---hhhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPV-LNA-KTLPDNVFIQKWYPQT---DILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~-~~~-~~~~~nv~~~~~~p~~---~~l~~~~~~ 106 (174)
+.|+|+.||... -..+++.|.+.+++++...+... ... +.. ....-.+...+..+.. ..+ ..+|
T Consensus 12 ~~ilVtGatG~i--------G~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~--~~~d 81 (318)
T 2r6j_A 12 SKILIFGGTGYI--------GNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM--KKVD 81 (318)
T ss_dssp CCEEEETTTSTT--------HHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH--TTCS
T ss_pred CeEEEECCCchH--------HHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH--cCCC
Confidence 578888877654 34455556666888777666543 110 000 0011123333443322 344 5799
Q ss_pred EEEecCCh
Q psy16939 107 LFITHGGI 114 (174)
Q Consensus 107 ~~I~hgG~ 114 (174)
.+|+-+|.
T Consensus 82 ~vi~~a~~ 89 (318)
T 2r6j_A 82 VVISALAF 89 (318)
T ss_dssp EEEECCCG
T ss_pred EEEECCch
Confidence 99998875
No 200
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=29.40 E-value=1.8e+02 Score=22.08 Aligned_cols=47 Identities=11% Similarity=-0.033 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
+-++..++..-+++|+-++|+... +..+++.+.++. +.+..++....
T Consensus 226 ~~l~~~~~~g~~GiVl~~~G~Gn~----p~~~~~~l~~a~-~~gi~VV~~Sr 272 (326)
T 1nns_A 226 LPAKALVDAGYDGIVSAGVGNGNL----YKSVFDTLATAA-KTGTAVVRSSR 272 (326)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBC----CHHHHHHHHHHH-HTTCEEEEEES
T ss_pred HHHHHHHhCCCCEEEEeeECCCCC----CHHHHHHHHHHH-HCCCEEEEECC
Confidence 345555543338999999999875 677666666665 45666666554
No 201
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=29.25 E-value=1.6e+02 Score=23.57 Aligned_cols=65 Identities=11% Similarity=0.081 Sum_probs=37.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHG 112 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hg 112 (174)
..|+|+.||... -..+++.|.+.+++|+.........+ .+....--.....+ ..+|++||-+
T Consensus 148 m~VLVTGatG~I--------G~~l~~~L~~~G~~V~~l~R~~~~~~--------~v~~d~~~~~~~~l--~~~D~Vih~A 209 (516)
T 3oh8_A 148 LTVAITGSRGLV--------GRALTAQLQTGGHEVIQLVRKEPKPG--------KRFWDPLNPASDLL--DGADVLVHLA 209 (516)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESSSCCTT--------CEECCTTSCCTTTT--TTCSEEEECC
T ss_pred CEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECCCCCcc--------ceeecccchhHHhc--CCCCEEEECC
Confidence 479998888753 34566666667888887776533211 11000001123444 6799999988
Q ss_pred Chh
Q psy16939 113 GIS 115 (174)
Q Consensus 113 G~~ 115 (174)
|..
T Consensus 210 ~~~ 212 (516)
T 3oh8_A 210 GEP 212 (516)
T ss_dssp CC-
T ss_pred CCc
Confidence 853
No 202
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=29.21 E-value=98 Score=23.50 Aligned_cols=98 Identities=9% Similarity=0.032 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+.+-+|.+|.++ ..++..+...+.+++.........+ .. .. ...+.+..+++ +.+|+++.|
T Consensus 138 ktvGIiGlG~IG----------~~vA~~l~~~G~~V~~~dr~~~~~~----~~-~~--~~~~~~l~ell--~~aDvV~l~ 198 (324)
T 3evt_A 138 QQLLIYGTGQIG----------QSLAAKASALGMHVIGVNTTGHPAD----HF-HE--TVAFTATADAL--ATANFIVNA 198 (324)
T ss_dssp CEEEEECCSHHH----------HHHHHHHHHTTCEEEEEESSCCCCT----TC-SE--EEEGGGCHHHH--HHCSEEEEC
T ss_pred CeEEEECcCHHH----------HHHHHHHHhCCCEEEEECCCcchhH----hH-hh--ccccCCHHHHH--hhCCEEEEc
Confidence 567788888774 3456666777888776544322111 11 11 23445667788 679999999
Q ss_pred CChh-----hH-HHHHHcCCC-eEecc--c--cchHHHHHHHHHHcCc
Q psy16939 112 GGIS-----SL-MEASSLGVP-VLGVP--F--FGDQYRNMVLLRHRGY 148 (174)
Q Consensus 112 gG~~-----t~-~eal~~g~P-~i~vP--~--~~dQ~~na~~l~~~G~ 148 (174)
.-.+ .+ .+.+..=+| .+++= . ..|+..-...+++.++
T Consensus 199 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i 246 (324)
T 3evt_A 199 LPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQL 246 (324)
T ss_dssp CCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSC
T ss_pred CCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCc
Confidence 7532 12 223333233 23332 1 2466666677766443
No 203
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=29.14 E-value=97 Score=20.71 Aligned_cols=51 Identities=8% Similarity=-0.000 Sum_probs=29.1
Q ss_pred CChHHHHHHHhc-----CC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEE
Q psy16939 18 DGLSDLQQRADA-----AK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIF 68 (174)
Q Consensus 18 ~~~~~~~~~~~~-----~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i 68 (174)
.+|+.+..|++. .. +++++++.|....-...-...+..+.+.+...+.+++
T Consensus 60 ~~p~~~~~f~~~l~~~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v 116 (175)
T 1ag9_A 60 EAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIV 116 (175)
T ss_dssp EECHHHHHHHHHHTTCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEEC
T ss_pred cChHHHHHHHhhhhhcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEE
Confidence 556666666542 22 5666666665431000114567788888887777655
No 204
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=29.12 E-value=1.5e+02 Score=24.12 Aligned_cols=29 Identities=10% Similarity=0.085 Sum_probs=19.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFW 69 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~ 69 (174)
.+++++-+|+.. .+.+.+.++..+....+
T Consensus 11 ~~I~IlD~g~~~---------~~~i~r~lr~~Gv~~~i 39 (527)
T 3tqi_A 11 HRILILDFGSQY---------AQLIARRVREIGVYCEL 39 (527)
T ss_dssp SEEEEEECSCTT---------HHHHHHHHHHHTCEEEE
T ss_pred CeEEEEECCCcc---------HHHHHHHHHHCCCeEEE
Confidence 468999999884 34566677777765443
No 205
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=29.12 E-value=1.9e+02 Score=22.07 Aligned_cols=49 Identities=14% Similarity=0.034 Sum_probs=31.8
Q ss_pred ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 19 GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 19 ~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
++.++-+.+-..+ +++|+-++|+... +..+++.+.++. +.+..++....
T Consensus 233 ~~~~~l~a~~~~g~~GiVle~~G~Gn~----p~~~~~~l~~a~-~~Gi~VV~~Sr 282 (334)
T 3nxk_A 233 GSGVAAKALFEHGTKGIVVAGSGAGSI----HKNQKDVLKELL-KKGLKVVVSSR 282 (334)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEBTTTBC----CHHHHHHHHHHH-TTTCEEEEEES
T ss_pred CCHHHHHHHHhCCCCEEEEeeECCCCC----cHHHHHHHHHHH-HCCCEEEEeCC
Confidence 4445444333355 8999999998864 677666666665 44666666553
No 206
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=28.90 E-value=57 Score=23.82 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=43.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Cccccc--cCCCCCEEEeec-C-Cchhh-------
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNA--KTLPDNVFIQKW-Y-PQTDI------- 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~--~~~~~nv~~~~~-~-p~~~~------- 99 (174)
.++++||.||.+. -..+...|++.+.+++......+ ..+..+ +....++..... + +..++
T Consensus 7 gKvalVTGas~GI--------G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 7 NKVVIVTGAGSGI--------GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3799999988864 56678888888998877654421 111000 012334443331 2 21111
Q ss_pred h-cCCCccEEEecCCh
Q psy16939 100 L-AHPNLRLFITHGGI 114 (174)
Q Consensus 100 l-~~~~~~~~I~hgG~ 114 (174)
. .+...|++|+.+|.
T Consensus 79 ~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 0 12679999999985
No 207
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=28.81 E-value=80 Score=22.41 Aligned_cols=35 Identities=11% Similarity=-0.128 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
.++++|+.|+.+. -..+.+.|.+.+++++......
T Consensus 22 ~k~vlITGas~gI--------G~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 22 SKNILVLGGSGAL--------GAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCCc
Confidence 3789999988753 5667778888899977766543
No 208
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=28.66 E-value=97 Score=18.47 Aligned_cols=106 Identities=12% Similarity=0.193 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...++..++.+.............. .....+.+.++ +|... |. .+.+.+.
T Consensus 10 ~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~~~-~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~ 73 (124)
T 1mb3_A 10 NELNMKLFHDLLEAQGYETLQTREGLSALSIAR-ENKPDLILMDIQLPEIS--------------GL-EVTKWLKEDDDL 73 (124)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHH-HHCCSEEEEESBCSSSB--------------HH-HHHHHHHHSTTT
T ss_pred CHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHh-cCCCCEEEEeCCCCCCC--------------HH-HHHHHHHcCccc
Confidence 344566666677777777654322211111000 12234555554 22211 22 2344443
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++++-...+. .......+.|+--.+. +.++.+++..++++++..
T Consensus 74 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 74 AHIPVVAVTAFAMK-GDEERIREGGCEAYIS-KPISVVHFLETIKRLLER 121 (124)
T ss_dssp TTSCEEEEC-------CHHHHHHHTCSEEEC-SSCCHHHHHHHHHHHHSC
T ss_pred cCCcEEEEECCCCH-HHHHHHHhCCCCEEEe-CCCCHHHHHHHHHHHHhc
Confidence 25788887543332 2334444567755554 457899999999988754
No 209
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=28.61 E-value=1.6e+02 Score=22.99 Aligned_cols=114 Identities=12% Similarity=0.146 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCC--CccccccCCCCCEEEe-------ecCCchhhhcC---CCccEEEecCChh----
Q psy16939 52 TKLGFLEVFKQLKLPIFWKIDITN--DPVLNAKTLPDNVFIQ-------KWYPQTDILAH---PNLRLFITHGGIS---- 115 (174)
Q Consensus 52 ~~~~i~~~l~~~~~~~i~~~~~~~--~~~~~~~~~~~nv~~~-------~~~p~~~~l~~---~~~~~~I~hgG~~---- 115 (174)
....++.++.+.|++++....... .+.. ...+..... +|.+...++.. ..+|+++.--|.-
T Consensus 17 ~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~---~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~g~~~e~~ 93 (446)
T 3ouz_A 17 IALRALRTIKEMGKKAICVYSEADKDALYL---KYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGYGFLSENQ 93 (446)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEGGGTTCTHH---HHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCSSTTTTCH
T ss_pred HHHHHHHHHHHcCCEEEEEEcCcccccchH---hhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECCcccccCH
Confidence 356788999999998877654322 1110 123344433 44444444321 2577776533321
Q ss_pred hHH-HHHHcCCCeEeccc-----cchHHHHHHHHHHcCceeEecC--CCCCHHHHHHHHHH
Q psy16939 116 SLM-EASSLGVPVLGVPF-----FGDQYRNMVLLRHRGYALIEPI--QTLTKQSFLKNAQT 168 (174)
Q Consensus 116 t~~-eal~~g~P~i~vP~-----~~dQ~~na~~l~~~G~g~~l~~--~~~~~~~l~~al~~ 168 (174)
.+. .+-..|+|.+.-+. ..|-..--+.++++|+-+.-.. .-.+.+++.++.++
T Consensus 94 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~ 154 (446)
T 3ouz_A 94 NFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKE 154 (446)
T ss_dssp HHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHH
Confidence 122 33357888755432 2344444455666776543221 11255666665554
No 210
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=28.32 E-value=94 Score=19.27 Aligned_cols=106 Identities=9% Similarity=0.004 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCc-hhhhcCCCccEEEecCChhhHHHHHH--cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQ-TDILAHPNLRLFITHGGISSLMEASS--LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~-~~~l~~~~~~~~I~hgG~~t~~eal~--~g 124 (174)
.......+...|...++.+.+.....+..+.........+.+.++ +|. .. | -.+.+.+. ..
T Consensus 14 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~--------------g-~~~~~~l~~~~~ 78 (140)
T 3h5i_A 14 SKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMD--------------G-VQTALAIQQISE 78 (140)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCC--------------H-HHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCC--------------H-HHHHHHHHhCCC
Confidence 455566777777777887765443322111111012345555554 221 11 1 12222222 47
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+|++-...+.. ......+.|+--.+. +.++.++|..++++++.
T Consensus 79 ~~ii~ls~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 79 LPVVFLTAHTEPA-VVEKIRSVTAYGYVM-KSATEQVLITIVEMALR 123 (140)
T ss_dssp CCEEEEESSSSCC-CCGGGGGSCEEEEEE-TTCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHH-HHHHHHhCCCcEEEe-CCCCHHHHHHHHHHHHH
Confidence 8888885443322 123344567665664 45789999999988764
No 211
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.24 E-value=51 Score=22.63 Aligned_cols=69 Identities=4% Similarity=-0.090 Sum_probs=39.3
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe--ecCC-chhhhcCCCccEEEe
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ--KWYP-QTDILAHPNLRLFIT 110 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~--~~~p-~~~~l~~~~~~~~I~ 110 (174)
.|+|+.||... -..+++.|.+.+++++...+...... . ..+.++.+. +..+ ....+ ..+|++|+
T Consensus 2 kilVtGatG~i--------G~~l~~~L~~~g~~V~~~~R~~~~~~--~-~~~~~~~~~~~D~~d~~~~~~--~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGATGRA--------GSAIVAEARRRGHEVLAVVRDPQKAA--D-RLGATVATLVKEPLVLTEADL--DSVDAVVD 68 (224)
T ss_dssp EEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESCHHHHH--H-HTCTTSEEEECCGGGCCHHHH--TTCSEEEE
T ss_pred EEEEEcCCCHH--------HHHHHHHHHHCCCEEEEEEecccccc--c-ccCCCceEEecccccccHhhc--ccCCEEEE
Confidence 37788777653 45566666667888877766422110 0 112233333 3322 22455 67999999
Q ss_pred cCChh
Q psy16939 111 HGGIS 115 (174)
Q Consensus 111 hgG~~ 115 (174)
-+|..
T Consensus 69 ~ag~~ 73 (224)
T 3h2s_A 69 ALSVP 73 (224)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 99873
No 212
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=28.21 E-value=78 Score=23.10 Aligned_cols=75 Identities=4% Similarity=-0.102 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Cccccc--cCCCCCEEEeec-C-Cchh---hhc--
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNA--KTLPDNVFIQKW-Y-PQTD---ILA-- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~--~~~~~nv~~~~~-~-p~~~---~l~-- 101 (174)
.++++|+.|+.+. -..+...|.+.+++++....... ..+..+ .....++..... + +... ++.
T Consensus 28 ~k~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALITGAGSGI--------GRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEESCSSHH--------HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4789999988764 56677778888998887665421 111000 012234443332 2 2211 111
Q ss_pred ---CCCccEEEecCCh
Q psy16939 102 ---HPNLRLFITHGGI 114 (174)
Q Consensus 102 ---~~~~~~~I~hgG~ 114 (174)
+...|++|+.+|.
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1479999999986
No 213
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=28.16 E-value=87 Score=24.58 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=38.3
Q ss_pred CCccEEEec----CChhhHHHHHHcCCCeEeccc--cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHH
Q psy16939 103 PNLRLFITH----GGISSLMEASSLGVPVLGVPF--FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQ 167 (174)
Q Consensus 103 ~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~--~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~ 167 (174)
..+-++|.. |...|...|+..|+|+..+|- +..+..-+..+-+.|+.++- +.+++.+.+.
T Consensus 237 S~~vvVvEA~~kSGsliTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~-----~~~Dil~~l~ 302 (382)
T 3maj_A 237 SVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLIT-----SASDIVEAVA 302 (382)
T ss_dssp CSCEEECCCCTTCTHHHHHHHHHHHTCCEEECCCCTTCGGGHHHHHHHHTTCEECS-----SHHHHHHHHT
T ss_pred CCceEEEecCCCCcHHHHHHHHHHhCCcEEEEcCCCCCcccccHHHHHHCCCEEEC-----CHHHHHHHhh
Confidence 444455543 335677788999999999984 33455556677777865543 4566665553
No 214
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=28.05 E-value=1.1e+02 Score=22.19 Aligned_cols=60 Identities=8% Similarity=-0.025 Sum_probs=35.0
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGG 113 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG 113 (174)
.|+|+.||... -..+++.|.+.|++|....+..... .+.. +-. ....+ ..+|.+||-+|
T Consensus 2 kILVTGatGfI--------G~~L~~~L~~~G~~V~~l~R~~~~~---------~~~~-~~~-~~~~l--~~~d~vihla~ 60 (298)
T 4b4o_A 2 RVLVGGGTGFI--------GTALTQLLNARGHEVTLVSRKPGPG---------RITW-DEL-AASGL--PSCDAAVNLAG 60 (298)
T ss_dssp EEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSCCTT---------EEEH-HHH-HHHCC--CSCSEEEECCC
T ss_pred EEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECCCCcC---------eeec-chh-hHhhc--cCCCEEEEecc
Confidence 48898887753 4456677777899888776543211 1111 001 11223 67899998776
Q ss_pred h
Q psy16939 114 I 114 (174)
Q Consensus 114 ~ 114 (174)
.
T Consensus 61 ~ 61 (298)
T 4b4o_A 61 E 61 (298)
T ss_dssp C
T ss_pred C
Confidence 3
No 215
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=27.69 E-value=1.4e+02 Score=20.01 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=28.5
Q ss_pred cCChHHHHHHHhcC----C-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcE
Q psy16939 17 IDGLSDLQQRADAA----K-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPI 67 (174)
Q Consensus 17 ~~~~~~~~~~~~~~----~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~ 67 (174)
..+|..+..|++.. . |++++++.|+.. .......+...+...+..+
T Consensus 97 ~~~p~~lK~~iD~~~~~l~gK~~~~~~~G~~~-----~~~~~~~l~~~l~~~G~~~ 147 (191)
T 1t0i_A 97 WGYPAALKNAIDRLYHEWHGKPALVVSYGGHG-----GSKCNDQLQEVLHGLKMNV 147 (191)
T ss_dssp TBCCHHHHHHHHTCSTTTTTCEEEEEEEETTT-----THHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEEeCCcc-----hhhHHHHHHHHHHHCCCEE
Confidence 35778888888863 2 667777665532 2344556666666666643
No 216
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.40 E-value=1.1e+02 Score=18.55 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~g 124 (174)
.......+...+.+.++.+.+.....+..+..+ ..+..+.+.++ .|.. .|.. +.+.+. ..
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlvi~d~~l~~~--------------~g~~-~~~~l~~~~~~ 79 (130)
T 3eod_A 16 EQVFRSLLDSWFSSLGATTVLAADGVDALELLG-GFTPDLMICDIAMPRM--------------NGLK-LLEHIRNRGDQ 79 (130)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHT-TCCCSEEEECCC-------------------CHH-HHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHh-cCCCCEEEEecCCCCC--------------CHHH-HHHHHHhcCCC
Confidence 345566777778888887665433222111111 22345555554 2211 1222 223332 35
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCC-CHHHHHHHHHHhhcC
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL-TKQSFLKNAQTMLND 172 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~-~~~~l~~al~~ll~~ 172 (174)
.|++++-...+... .....+.|+--.+.+ .+ +.+.|..++++++..
T Consensus 80 ~~ii~~t~~~~~~~-~~~~~~~g~~~~l~K-P~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 80 TPVLVISATENMAD-IAKALRLGVEDVLLK-PVKDLNRLREMVFACLYP 126 (130)
T ss_dssp CCEEEEECCCCHHH-HHHHHHHCCSEEEES-CC---CHHHHHHHHHHC-
T ss_pred CCEEEEEcCCCHHH-HHHHHHcCCCEEEeC-CCCcHHHHHHHHHHHhch
Confidence 78887755444333 344446677666643 34 678999999988764
No 217
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=27.03 E-value=16 Score=16.52 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=12.2
Q ss_pred ChhhHHHHHHcCCCeEe
Q psy16939 113 GISSLMEASSLGVPVLG 129 (174)
Q Consensus 113 G~~t~~eal~~g~P~i~ 129 (174)
|.|++...++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 55677778888887654
No 218
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=27.01 E-value=1.6e+02 Score=20.53 Aligned_cols=105 Identities=9% Similarity=0.037 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~g 124 (174)
.......+...|+..++.+.......+..+... ..+..+.+.++ +|..+ |. .+.+.+. ..
T Consensus 32 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvllD~~lp~~~--------------g~-~~~~~lr~~~~~ 95 (250)
T 3r0j_A 32 EANIVELLSVSLKFQGFEVYTATNGAQALDRAR-ETRPDAVILDVXMPGMD--------------GF-GVLRRLRADGID 95 (250)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHH-HHCCSEEEEESCCSSSC--------------HH-HHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH-hCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcCCC
Confidence 455566677777777887664433222111111 12345666654 33221 22 2333333 35
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+|++-...+.. .....-+.|+--.+. +.++.++|..+++.++.
T Consensus 96 ~~ii~lt~~~~~~-~~~~~~~~Ga~~yl~-Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 96 APALFLTARDSLQ-DKIAGLTLGGDDYVT-KPFSLEEVVARLRVILR 140 (250)
T ss_dssp CCEEEEECSTTHH-HHHHHHTSTTCEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHH-HHHHHHHcCCcEEEe-CCCCHHHHHHHHHHHHH
Confidence 7888776544433 334445567665554 35688999999888763
No 219
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=26.96 E-value=1.6e+02 Score=21.19 Aligned_cols=35 Identities=6% Similarity=-0.144 Sum_probs=24.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
.+.|+|+.||... -..+++.|.+.+++++......
T Consensus 7 ~~~vlVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILITGGAGFI--------GGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEECCCChH--------HHHHHHHHHHCCCEEEEEecCC
Confidence 4689999887753 4456666666788887776543
No 220
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=26.94 E-value=1.3e+02 Score=24.63 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=24.8
Q ss_pred CCccEEEecCCh------hhHHHHHHcCCCeEecc
Q psy16939 103 PNLRLFITHGGI------SSLMEASSLGVPVLGVP 131 (174)
Q Consensus 103 ~~~~~~I~hgG~------~t~~eal~~g~P~i~vP 131 (174)
.+..+++++.|. +.+.||-+.++|+|++.
T Consensus 72 g~p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 72 GKAGVALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp SSCEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 557788999986 67889999999999994
No 221
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=26.73 E-value=81 Score=22.85 Aligned_cols=73 Identities=7% Similarity=-0.069 Sum_probs=43.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEee-cCC-chhh-------h-c
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQK-WYP-QTDI-------L-A 101 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~-~~p-~~~~-------l-~ 101 (174)
++|+||.||.+. -.++...|.+.|.++++....++ ..++.+ +. .++.... -+. ..++ . .
T Consensus 3 K~vlVTGas~GI--------G~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGHGI--------GKQICLDFLEAGDKVCFIDIDEKRSADFAK-ER-PNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TC-TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hc-CCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 689999988864 56788888999999887765422 111111 22 2333322 122 1111 1 1
Q ss_pred CCCccEEEecCChh
Q psy16939 102 HPNLRLFITHGGIS 115 (174)
Q Consensus 102 ~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|.+
T Consensus 73 ~g~iDiLVNNAG~~ 86 (247)
T 3ged_A 73 LQRIDVLVNNACRG 86 (247)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 26799999999864
No 222
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=26.57 E-value=1.9e+02 Score=21.17 Aligned_cols=69 Identities=7% Similarity=-0.144 Sum_probs=36.4
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCC-CCEEE--eecCCch---hhhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLP-DNVFI--QKWYPQT---DILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~nv~~--~~~~p~~---~~l~~~~~~ 106 (174)
..|+|+.||... -..+++.|.+.+++++.........+ .+. .++.+ .+..+.. .++ ..+|
T Consensus 14 M~ilVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~~----~l~~~~~~~~~~Dl~d~~~~~~~~--~~~d 79 (342)
T 2x4g_A 14 VKYAVLGATGLL--------GHHAARAIRAAGHDLVLIHRPSSQIQ----RLAYLEPECRVAEMLDHAGLERAL--RGLD 79 (342)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEECTTSCGG----GGGGGCCEEEECCTTCHHHHHHHT--TTCS
T ss_pred CEEEEECCCcHH--------HHHHHHHHHHCCCEEEEEecChHhhh----hhccCCeEEEEecCCCHHHHHHHH--cCCC
Confidence 368999887753 34455566667888877665433211 111 13332 2333322 234 5799
Q ss_pred EEEecCChh
Q psy16939 107 LFITHGGIS 115 (174)
Q Consensus 107 ~~I~hgG~~ 115 (174)
++||-+|..
T Consensus 80 ~vih~a~~~ 88 (342)
T 2x4g_A 80 GVIFSAGYY 88 (342)
T ss_dssp EEEEC----
T ss_pred EEEECCccC
Confidence 999998853
No 223
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=26.54 E-value=1.1e+02 Score=20.40 Aligned_cols=49 Identities=8% Similarity=-0.038 Sum_probs=28.0
Q ss_pred hHHHHHHH-hc-----CC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEE
Q psy16939 20 LSDLQQRA-DA-----AK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIF 68 (174)
Q Consensus 20 ~~~~~~~~-~~-----~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i 68 (174)
|..+.+|+ +. .. +++.+++.|....-..........+.+.|...+.+++
T Consensus 66 p~~~~~fl~~~l~~~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~ 121 (173)
T 2fcr_A 66 GTSWDEFLYDKLPEVDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPV 121 (173)
T ss_dssp CSTHHHHHHHTGGGCCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHhhccccccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEE
Confidence 67788888 52 12 4555555554321001123557777788887787655
No 224
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.42 E-value=1.2e+02 Score=18.95 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=32.8
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|+|++-...+... .....+.|+--.+. +.++.++|..++++++...
T Consensus 93 ~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~ 141 (150)
T 4e7p_A 93 LETKVVVVTTFKRAGY-FERAVKAGVDAYVL-KERSIADLMQTLHTVLEGR 141 (150)
T ss_dssp CSCEEEEEESCCCHHH-HHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCCCHHH-HHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHcCC
Confidence 3678887765544433 34445667765554 4568999999999998653
No 225
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=26.34 E-value=1.2e+02 Score=20.48 Aligned_cols=48 Identities=10% Similarity=-0.057 Sum_probs=27.7
Q ss_pred cCChHHHHHHHhcC--------C-CCeEEEEc-CCCcCCCCCCHHHHHHHHHHHhhCCCcE
Q psy16939 17 IDGLSDLQQRADAA--------K-GGFVYMSF-GSVVDPTKLSEETKLGFLEVFKQLKLPI 67 (174)
Q Consensus 17 ~~~~~~~~~~~~~~--------~-~~~v~vs~-Gs~~~~~~~~~~~~~~i~~~l~~~~~~~ 67 (174)
..+|..+..|++.. . ++.++++. |+... .....+.++...+...+..+
T Consensus 65 g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t~g~~~g---~~~~~l~~l~~~l~~~g~~~ 122 (188)
T 2ark_A 65 GLVSWKMKRFFDDVLGDLWGEIDGKIACAFSSSGGWGG---GNEVACMSILTMLMNFGFLV 122 (188)
T ss_dssp TBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEEESSBTS---SHHHHHHHHHHHHHHTTCEE
T ss_pred CcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEECCCCCC---CHHHHHHHHHHHHHHCCcEE
Confidence 46777888888742 2 45554444 44432 12345677777777666543
No 226
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=26.26 E-value=57 Score=19.98 Aligned_cols=46 Identities=9% Similarity=0.056 Sum_probs=29.1
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
.+|++++....+... ....+.|+--.+. +.++.++|..++++++..
T Consensus 77 ~~pii~~s~~~~~~~--~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPADQPVPDAYLV-KPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TCCEEEEESCCC-------TTSCCCSEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHhH--HHHhhcCCceEEe-ccCCHHHHHHHHHHHHhh
Confidence 788888865544433 3444556554554 457899999999998753
No 227
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.25 E-value=65 Score=20.09 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=33.2
Q ss_pred CCccEEEecCChhhHHH-----HHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITHGGISSLME-----ASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~e-----al~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++|.--+...... +-..+...+++-... ..+...+++.|+..++.+ .......+.+.+..
T Consensus 68 ~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~--~~~~~~l~~~g~~~v~~p----~~~~~~~~~~~~~~ 136 (140)
T 1lss_A 68 EDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISE--IEYKDVFERLGVDVVVSP----ELIAANYIEKLIER 136 (140)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSS--TTHHHHHHHTTCSEEECH----HHHHHHHHHHHHTC
T ss_pred ccCCEEEEeeCCchHHHHHHHHHHHcCCCEEEEEecC--HhHHHHHHHcCCCEEECH----HHHHHHHHHHHhcc
Confidence 57898888766543222 223454444432222 233567788888777643 23344444444443
No 228
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=26.01 E-value=85 Score=22.36 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Cccccc--cCCCCCEEEee--cCCchh---hhc--
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNA--KTLPDNVFIQK--WYPQTD---ILA-- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~--~~~~~nv~~~~--~~p~~~---~l~-- 101 (174)
.++++|+.||.+. -..+.+.|.+.|++++....... ..+..+ .....++.... ..+... ++.
T Consensus 7 ~k~vlVTGas~GI--------G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVAVIGAGDYI--------GAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEEEECCSSHH--------HHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHH
Confidence 4789999888754 56677778888998877665432 111100 01133444433 222221 111
Q ss_pred --CCCccEEEecCCh
Q psy16939 102 --HPNLRLFITHGGI 114 (174)
Q Consensus 102 --~~~~~~~I~hgG~ 114 (174)
....|++|+.+|.
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 0257999999995
No 229
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=25.92 E-value=84 Score=23.84 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=36.0
Q ss_pred CchhhhcCCCccEEEecCChh--------hHHHHHHcCCCeEec---cccchHHHHHHHHHHcCceeEe
Q psy16939 95 PQTDILAHPNLRLFITHGGIS--------SLMEASSLGVPVLGV---PFFGDQYRNMVLLRHRGYALIE 152 (174)
Q Consensus 95 p~~~~l~~~~~~~~I~hgG~~--------t~~eal~~g~P~i~v---P~~~dQ~~na~~l~~~G~g~~l 152 (174)
+..+++ .+..|++|---+.. -+.+++.+|+.+++. |...+-..-....++.|+-+..
T Consensus 78 d~~~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ 145 (331)
T 3c8m_A 78 SASEAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRY 145 (331)
T ss_dssp CHHHHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred CHHHHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEE
Confidence 556666 68899988765542 466799999999983 5432222333334456655443
No 230
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=25.82 E-value=71 Score=21.76 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=50.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCC-EEEeec---C--CchhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDN-VFIQKW---Y--PQTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~n-v~~~~~---~--p~~~~l~~~~ 104 (174)
.+.||++.. .... ......+++.+.|++.+..+-+..+..... .......+.. ..-..| + -....+ .+
T Consensus 7 ~~kIYLAGP-~F~~--~~~~~~~~~~~~L~~~~~g~~v~~P~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~D~~~i--~~ 81 (167)
T 1s2d_A 7 TGKIYLGSP-FYSD--AQRERAAKAKELLAKNPSIAHVFFPFDDGFTDPDEKNPEIGGIRSMVWRDATYQNDLTGI--SN 81 (167)
T ss_dssp CEEEEEECC-CSSH--HHHHHHHHHHHHHTTCTTEEEEECTTC-CCCCTTCC-CCTTSCCCHHHHHHHHHHHHHHH--HH
T ss_pred CcEEEEECC-CCCH--HHHHHHHHHHHHHHhCCCcCEEECCccccccccccccccccccCChHHHHHHHHHHHHHH--Hh
Confidence 457888776 3321 123567888888887743333333322110 0000000100 000001 1 112233 67
Q ss_pred ccEEEe-----cCChhhHHHH---HHcCCCeEecc
Q psy16939 105 LRLFIT-----HGGISSLMEA---SSLGVPVLGVP 131 (174)
Q Consensus 105 ~~~~I~-----hgG~~t~~ea---l~~g~P~i~vP 131 (174)
||++|- ....||..|. .+.|+|++++.
T Consensus 82 aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 82 ATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 999987 6779999995 78899999995
No 231
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=25.77 E-value=46 Score=24.28 Aligned_cols=34 Identities=6% Similarity=-0.135 Sum_probs=26.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 32 gk~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 32 GKRALITGASTGI--------GKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp TCEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988754 456777788889998877654
No 232
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=25.75 E-value=1.3e+02 Score=22.58 Aligned_cols=70 Identities=7% Similarity=-0.100 Sum_probs=39.1
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCC-ccccccCCCCCEEEee--cC-Cch---hhhcCCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITND-PVLNAKTLPDNVFIQK--WY-PQT---DILAHPN 104 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~-~~~~~~~~~~nv~~~~--~~-p~~---~~l~~~~ 104 (174)
+.|+|+.||... . ..+++.|.+. +++|+........ ..+ ....++.+.. .. +.. .++ ..
T Consensus 25 ~~vlVtGatG~i----G----~~l~~~L~~~~g~~V~~~~r~~~~~~~~---~~~~~v~~~~~Dl~~d~~~~~~~~--~~ 91 (372)
T 3slg_A 25 KKVLILGVNGFI----G----HHLSKRILETTDWEVFGMDMQTDRLGDL---VKHERMHFFEGDITINKEWVEYHV--KK 91 (372)
T ss_dssp CEEEEESCSSHH----H----HHHHHHHHHHSSCEEEEEESCCTTTGGG---GGSTTEEEEECCTTTCHHHHHHHH--HH
T ss_pred CEEEEECCCChH----H----HHHHHHHHhCCCCEEEEEeCChhhhhhh---ccCCCeEEEeCccCCCHHHHHHHh--cc
Confidence 679999888754 3 3445555554 7787777665332 211 1123454443 23 222 234 46
Q ss_pred ccEEEecCChh
Q psy16939 105 LRLFITHGGIS 115 (174)
Q Consensus 105 ~~~~I~hgG~~ 115 (174)
+|++||-+|..
T Consensus 92 ~d~Vih~A~~~ 102 (372)
T 3slg_A 92 CDVILPLVAIA 102 (372)
T ss_dssp CSEEEECBCCC
T ss_pred CCEEEEcCccc
Confidence 89999977743
No 233
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=25.69 E-value=48 Score=24.03 Aligned_cols=34 Identities=12% Similarity=-0.133 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.||.+. -..+.+.|.+.+++++.....
T Consensus 30 ~k~vlVTGas~GI--------G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGGL--------GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999888753 456777777789988776554
No 234
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=25.61 E-value=1.4e+02 Score=19.44 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK 70 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~ 70 (174)
++ |++|.+.. .++.+..++..+...++.++-.
T Consensus 25 ~g-vliSv~d~------dK~~l~~~a~~l~~lGf~i~AT 56 (143)
T 2yvq_A 25 KG-ILIGIQQS------FRPRFLGVAEQLHNEGFKLFAT 56 (143)
T ss_dssp SE-EEEECCGG------GHHHHHHHHHHHHTTTCEEEEE
T ss_pred CC-EEEEeccc------chHHHHHHHHHHHHCCCEEEEC
Confidence 56 89988764 4566777888999999885543
No 235
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=25.52 E-value=91 Score=22.47 Aligned_cols=72 Identities=8% Similarity=-0.006 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEee--cCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQK--WYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~--~~p~~~---~l~---- 101 (174)
.++++|+.|+.+. -..+.+.|.+.+++++....... ..+ ....++.... ..+... ++.
T Consensus 16 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 16 KKLVVITGASSGI--------GEAIARRFSEEGHPLLLLARRVERLKA----LNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp CCEEEEESTTSHH--------HHHHHHHHHHTTCCEEEEESCHHHHHT----TCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECCHHHHHH----hhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 4789999988754 55677788888999887765421 111 1122333332 222211 111
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 84 ~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 84 IYGPADAIVNNAGMM 98 (266)
T ss_dssp HHCSEEEEEECCCCC
T ss_pred HCCCCCEEEECCCcC
Confidence 14789999999964
No 236
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=25.46 E-value=71 Score=23.19 Aligned_cols=75 Identities=8% Similarity=0.103 Sum_probs=43.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-----ccccccCCCCCEEEee--cCCc-hh---hh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-----PVLNAKTLPDNVFIQK--WYPQ-TD---IL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~nv~~~~--~~p~-~~---~l 100 (174)
.++++|+.|+.+. -..+++.|.+.+++++...+.... .++.+ ..+.++.+.. ..+. .. +.
T Consensus 12 ~k~vlITGas~GI--------G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~v~~~~ 82 (311)
T 3o26_A 12 RRCAVVTGGNKGI--------GFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN-SNHENVVFHQLDVTDPIATMSSLA 82 (311)
T ss_dssp CCEEEESSCSSHH--------HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TTCCSEEEEECCTTSCHHHHHHHH
T ss_pred CcEEEEecCCchH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCceEEEEccCCCcHHHHHHHH
Confidence 4789999888753 456677777789988887654221 11111 2233454443 2232 11 11
Q ss_pred c-----CCCccEEEecCChh
Q psy16939 101 A-----HPNLRLFITHGGIS 115 (174)
Q Consensus 101 ~-----~~~~~~~I~hgG~~ 115 (174)
. +...|++|+.+|..
T Consensus 83 ~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 83 DFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccc
Confidence 0 15799999999964
No 237
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=25.45 E-value=89 Score=23.74 Aligned_cols=57 Identities=12% Similarity=0.024 Sum_probs=37.1
Q ss_pred HHHHHHHhc---CCCCeEEEEcCCCcCCC----------CCCHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q psy16939 21 SDLQQRADA---AKGGFVYMSFGSVVDPT----------KLSEETKLGFLEVFKQLKLPIFWKIDITNDP 77 (174)
Q Consensus 21 ~~~~~~~~~---~~~~~v~vs~Gs~~~~~----------~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~ 77 (174)
..+.+|+.. .++++|+||.|...-+- .-+..+-..+++++...|+.|++.+++..++
T Consensus 23 ~~i~~~~~~~~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~ 92 (313)
T 1p9o_A 23 EVMARFAARLGAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAF 92 (313)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCC
T ss_pred HHHHHHhhhhhhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcC
Confidence 445556543 23566888888873210 0013466788899999999999998875544
No 238
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.43 E-value=1.3e+02 Score=18.80 Aligned_cols=106 Identities=8% Similarity=0.060 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...++..++.+..........+... .....+.+.++ +|..+ | -.+.+.+.
T Consensus 23 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvl~D~~mp~~~--------------g-~~~~~~lr~~~~~ 86 (143)
T 3m6m_D 23 HEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA-EEDYDAVIVDLHMPGMN--------------G-LDMLKQLRVMQAS 86 (143)
T ss_dssp SHHHHHHHHHHHHC--CEEEEESSHHHHHHHHH-HSCCSEEEEESCCSSSC--------------H-HHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHh-cCCCCEEEEeCCCCCCC--------------H-HHHHHHHHhchhc
Confidence 344566666677777777665433222111111 12334555543 23211 1 13344443
Q ss_pred --cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 --LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 --~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
...|++++....+. .......+.|+--.+. +.++.++|.++++++...
T Consensus 87 ~~~~~pii~~s~~~~~-~~~~~~~~~Ga~~~l~-KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 87 GMRYTPVVVLSADVTP-EAIRACEQAGARAFLA-KPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp TCCCCCEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHC--
T ss_pred cCCCCeEEEEeCCCCH-HHHHHHHHcChhheee-CCCCHHHHHHHHHHHHHh
Confidence 23788888654443 3345566778766654 456899999999988643
No 239
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=25.36 E-value=2.3e+02 Score=22.12 Aligned_cols=118 Identities=11% Similarity=0.008 Sum_probs=60.9
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc---CCCccEE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA---HPNLRLF 108 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~---~~~~~~~ 108 (174)
.+|++.+|.. -..+.+.|...+.+|++.-.... ...+. ...-.+...+- ...++|. ...++++
T Consensus 6 ~viIiG~Gr~----------G~~va~~L~~~g~~vvvId~d~~~v~~~~--~~g~~vi~GDa-t~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 6 RVIIAGFGRF----------GQITGRLLLSSGVKMVVLDHDPDHIETLR--KFGMKVFYGDA-TRMDLLESAGAAKAEVL 72 (413)
T ss_dssp SEEEECCSHH----------HHHHHHHHHHTTCCEEEEECCHHHHHHHH--HTTCCCEESCT-TCHHHHHHTTTTTCSEE
T ss_pred eEEEECCCHH----------HHHHHHHHHHCCCCEEEEECCHHHHHHHH--hCCCeEEEcCC-CCHHHHHhcCCCccCEE
Confidence 5677766655 34567777778888777654422 11111 12223333333 3333332 1568887
Q ss_pred EecCChhhHHHH-----HHcC--CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy16939 109 ITHGGISSLMEA-----SSLG--VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNA 166 (174)
Q Consensus 109 I~hgG~~t~~ea-----l~~g--~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al 166 (174)
|.--+....... -..+ +++++. ..-..++..+.+.|+-.++.........+...+
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiar---a~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~ 134 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIAR---ARDVDHYIRLRQAGVEKPERETFEGALKTGRLA 134 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEE---ESSHHHHHHHHHTTCSSCEETTHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHCCCCEEECccHHHHHHHHHHH
Confidence 766553322211 1222 233332 333567788899999988865433334444433
No 240
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.20 E-value=85 Score=23.17 Aligned_cols=34 Identities=9% Similarity=-0.081 Sum_probs=27.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++||.||.+. -..+.+.|.+.|.+|++....
T Consensus 29 gKvalVTGas~GI--------G~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSGI--------GLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 4899999988864 577888899999998877654
No 241
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=24.98 E-value=1e+02 Score=21.93 Aligned_cols=48 Identities=19% Similarity=0.334 Sum_probs=29.2
Q ss_pred CCCeEeccccc----hH---HHHHHHHHHcCceeEecC------------CCCCHHHHHHHHHHhhc
Q psy16939 124 GVPVLGVPFFG----DQ---YRNMVLLRHRGYALIEPI------------QTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 124 g~P~i~vP~~~----dQ---~~na~~l~~~G~g~~l~~------------~~~~~~~l~~al~~ll~ 171 (174)
++|++++|... +. ..|-+.+.+.|+-++=.. .-.+.++|.+.+.+.+.
T Consensus 132 ~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~lacg~~G~gr~~~~~~Iv~~v~~~l~ 198 (209)
T 1mvl_A 132 TKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLASGDYGNGAMAEPSLIYSTVRLFWE 198 (209)
T ss_dssp TSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC---------CCBCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCccccccCCCcCCCCCCCHHHHHHHHHHHhC
Confidence 68999999733 22 224445566776544111 12367888888877664
No 242
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=24.77 E-value=1.9e+02 Score=20.58 Aligned_cols=67 Identities=6% Similarity=-0.056 Sum_probs=37.7
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC-CccccccCCCCCEEE--eecCCch---hhhcCCCcc
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN-DPVLNAKTLPDNVFI--QKWYPQT---DILAHPNLR 106 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~-~~~~~~~~~~~nv~~--~~~~p~~---~~l~~~~~~ 106 (174)
.|+|+.||... -..+++.|.+. +++++...+... ...+ .+.++.+ .++.+.. ..+ ..+|
T Consensus 2 ~ilVtGatG~i--------G~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~~~v~~~~~D~~d~~~l~~~~--~~~d 67 (289)
T 3e48_A 2 NIMLTGATGHL--------GTHITNQAIANHIDHFHIGVRNVEKVPDD----WRGKVSVRQLDYFNQESMVEAF--KGMD 67 (289)
T ss_dssp CEEEETTTSHH--------HHHHHHHHHHTTCTTEEEEESSGGGSCGG----GBTTBEEEECCTTCHHHHHHHT--TTCS
T ss_pred EEEEEcCCchH--------HHHHHHHHhhCCCCcEEEEECCHHHHHHh----hhCCCEEEEcCCCCHHHHHHHH--hCCC
Confidence 37788777643 33455556665 778887766532 1111 1233333 3343322 234 6799
Q ss_pred EEEecCCh
Q psy16939 107 LFITHGGI 114 (174)
Q Consensus 107 ~~I~hgG~ 114 (174)
.+|+-+|.
T Consensus 68 ~vi~~a~~ 75 (289)
T 3e48_A 68 TVVFIPSI 75 (289)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998885
No 243
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=24.65 E-value=92 Score=22.11 Aligned_cols=34 Identities=3% Similarity=-0.174 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 12 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTGASDGI--------GREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988753 456777778889998776654
No 244
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=24.59 E-value=1e+02 Score=22.95 Aligned_cols=34 Identities=9% Similarity=0.014 Sum_probs=25.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++|+|+.||.+. -..++..|.+.+++++.....
T Consensus 8 ~k~vlVTGas~gI--------G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGANGV--------GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTSTH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCchHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 4689999988764 456777777789988776654
No 245
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.54 E-value=1.2e+02 Score=18.31 Aligned_cols=107 Identities=11% Similarity=0.065 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEe-cCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---c
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKI-DITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---L 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~ 123 (174)
.......+...+.+.++.++... ......+... ..+..+.+.++ +|... |. .+.+.+. .
T Consensus 10 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~-~~~~dlii~d~~l~~~~--------------g~-~~~~~l~~~~~ 73 (134)
T 3f6c_A 10 HPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVE-TLKPDIVIIDVDIPGVN--------------GI-QVLETLRKRQY 73 (134)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHH-HHCCSEEEEETTCSSSC--------------HH-HHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHH-hcCCCEEEEecCCCCCC--------------hH-HHHHHHHhcCC
Confidence 45556677777887887776333 3333211111 12345555554 23211 11 2223332 3
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..|++++-...+.. ......+.|+--.+.+ .++.++|..++++++...
T Consensus 74 ~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~k-p~~~~~l~~~i~~~~~~~ 121 (134)
T 3f6c_A 74 SGIIIIVSAKNDHF-YGKHCADAGANGFVSK-KEGMNNIIAAIEAAKNGY 121 (134)
T ss_dssp CSEEEEEECC---C-THHHHHHTTCSEEEEG-GGCTHHHHHHHHHHHTTC
T ss_pred CCeEEEEeCCCChH-HHHHHHHhCCCEEEeC-CCCHHHHHHHHHHHHCCC
Confidence 56776664433322 2334446676655543 467899999999887653
No 246
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=24.46 E-value=1.4e+02 Score=20.00 Aligned_cols=48 Identities=15% Similarity=-0.003 Sum_probs=25.9
Q ss_pred cCChHHHHHHHhcC---------C-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCc
Q psy16939 17 IDGLSDLQQRADAA---------K-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLP 66 (174)
Q Consensus 17 ~~~~~~~~~~~~~~---------~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~ 66 (174)
..+|..+..|++.. . +++.+++.++.... .....+..+...+...+..
T Consensus 84 ~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~--~~~~~~~~l~~~l~~~g~~ 141 (200)
T 2a5l_A 84 GNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHG--GQETTQLSMLLPLLHHGML 141 (200)
T ss_dssp TBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSCSSC--CHHHHHHHHHHHHHHTTCE
T ss_pred cCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCCCCC--CHHHHHHHHHHHHHHCCCE
Confidence 35777788887753 2 45544443332210 1234566677777666644
No 247
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=24.38 E-value=55 Score=21.07 Aligned_cols=48 Identities=13% Similarity=-0.034 Sum_probs=28.4
Q ss_pred CChHHHHHHHhc-----CC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcE
Q psy16939 18 DGLSDLQQRADA-----AK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPI 67 (174)
Q Consensus 18 ~~~~~~~~~~~~-----~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~ 67 (174)
.+|+.+..|++. .. +++.+++.|.... .........+.+.|+..+..+
T Consensus 66 ~~p~~~~~fl~~l~~~~l~~k~~~vfg~G~~~y--~~~~~a~~~l~~~l~~~G~~~ 119 (148)
T 3f6r_A 66 EMQDDFLSLFEEFDRIGLAGRKVAAFASGDQEY--EHFCGAVPAIEERAKELGATI 119 (148)
T ss_dssp EECHHHHHHHTTGGGTCCTTCEEEEEEEECTTS--SSTTTHHHHHHHHHHHTTCEE
T ss_pred CCcHHHHHHHHHhhccCCCCCEEEEEEeCCCCH--HHHHHHHHHHHHHHHHcCCEE
Confidence 467778888775 12 5566666654432 123445666777777777643
No 248
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.26 E-value=1.4e+02 Score=20.14 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=23.8
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL 65 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~ 65 (174)
.+|+++||-.. .+...++..++.|++.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLA---MPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSS---SCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchh---hHHHHHHHHHHHHhcCCC
Confidence 58999999875 478889999999988753
No 249
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=24.25 E-value=1.1e+02 Score=22.29 Aligned_cols=75 Identities=7% Similarity=-0.059 Sum_probs=43.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccc--cCCCCCEEEee--cCCchh---hh----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA--KTLPDNVFIQK--WYPQTD---IL---- 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~--~~p~~~---~l---- 100 (174)
.++++||.||.+. =..+...|.+.+.++++.....+..+..+ .....++.... -.+..+ +.
T Consensus 7 gKvalVTGas~GI--------G~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 7 DKVVIVTGGASGI--------GGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 4899999988864 56678888889998888766543211000 01122222222 222111 11
Q ss_pred -cCCCccEEEecCCh
Q psy16939 101 -AHPNLRLFITHGGI 114 (174)
Q Consensus 101 -~~~~~~~~I~hgG~ 114 (174)
.+.+.|++|+.+|.
T Consensus 79 ~~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGV 93 (258)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 12679999999995
No 250
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=24.25 E-value=1.4e+02 Score=22.47 Aligned_cols=98 Identities=10% Similarity=-0.059 Sum_probs=53.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+.+-++.+|.++ ..+.+.+...+.+++......... ..-.......+..+++ +.+|+++.|
T Consensus 140 ~tvGIiG~G~IG----------~~vA~~l~~~G~~V~~~dr~~~~~-------~~~~~~~~~~~l~ell--~~aDiV~l~ 200 (315)
T 3pp8_A 140 FSVGIMGAGVLG----------AKVAESLQAWGFPLRCWSRSRKSW-------PGVESYVGREELRAFL--NQTRVLINL 200 (315)
T ss_dssp CCEEEECCSHHH----------HHHHHHHHTTTCCEEEEESSCCCC-------TTCEEEESHHHHHHHH--HTCSEEEEC
T ss_pred CEEEEEeeCHHH----------HHHHHHHHHCCCEEEEEcCCchhh-------hhhhhhcccCCHHHHH--hhCCEEEEe
Confidence 567788888874 345677777888877654332211 1111122223456677 679999999
Q ss_pred CChh-----hH-HHHHHcCCC-eEeccc----cchHHHHHHHHHHcCc
Q psy16939 112 GGIS-----SL-MEASSLGVP-VLGVPF----FGDQYRNMVLLRHRGY 148 (174)
Q Consensus 112 gG~~-----t~-~eal~~g~P-~i~vP~----~~dQ~~na~~l~~~G~ 148 (174)
.-.+ .+ .+.+..=+| .+++=. ..|+..-...+++-.+
T Consensus 201 ~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i 248 (315)
T 3pp8_A 201 LPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKL 248 (315)
T ss_dssp CCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE
T ss_pred cCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCc
Confidence 7533 22 222332232 333321 2466666677766443
No 251
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=24.17 E-value=1.1e+02 Score=20.02 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=29.5
Q ss_pred CChHHHHHHHhc-----CC-CCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhCCCcEE
Q psy16939 18 DGLSDLQQRADA-----AK-GGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIF 68 (174)
Q Consensus 18 ~~~~~~~~~~~~-----~~-~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~~~~~i 68 (174)
.+|..+.+|++. .. +++.+++.|... .. .........+.+.+...+..++
T Consensus 61 ~~p~~~~~f~~~l~~~~l~gk~~~~f~t~~~~~~~-~~~~~a~~~l~~~l~~~g~~~~ 117 (169)
T 1czn_A 61 ELQSDWEGIYDDLDSVNFQGKKVAYFGAGDQVGYS-DNFQDAMGILEEKISSLGSQTV 117 (169)
T ss_dssp EECHHHHHHGGGGGGSCCTTCEEEEEEECCTTTTT-TSTTHHHHHHHHHHHHTTCEEC
T ss_pred cCCHHHHHHHHHhhhhccCCCEEEEEEECCCchhh-HHHHHHHHHHHHHHHHCCCEEE
Confidence 467767777662 22 566666666442 11 1134567777778877776554
No 252
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=24.04 E-value=31 Score=23.83 Aligned_cols=22 Identities=23% Similarity=0.495 Sum_probs=18.5
Q ss_pred cEEEecCChhhHHHHHHcCCCe
Q psy16939 106 RLFITHGGISSLMEASSLGVPV 127 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~ 127 (174)
-++|+|||...+.=+...|.|.
T Consensus 138 vlvVsHg~~ir~ll~~llg~~~ 159 (202)
T 3mxo_A 138 EIFICHANVIRYIVCRALQFPP 159 (202)
T ss_dssp EEEEECHHHHHHHHHHHTTCCG
T ss_pred EEEEeCHHHHHHHHHHHhCCCH
Confidence 5899999988888888888875
No 253
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=24.03 E-value=2.1e+02 Score=20.76 Aligned_cols=73 Identities=11% Similarity=0.047 Sum_probs=38.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CC--c-ccc--ccCCCCCE--EEeecCCch---hhhc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-ND--P-VLN--AKTLPDNV--FIQKWYPQT---DILA 101 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~--~-~~~--~~~~~~nv--~~~~~~p~~---~~l~ 101 (174)
+.|+|+.||... . ..+++.|.+.+++++...+.. .. + ... ......++ ...++.+.. ..+
T Consensus 5 ~~ilVtGatG~i----G----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~- 75 (321)
T 3c1o_A 5 EKIIIYGGTGYI----G----KFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL- 75 (321)
T ss_dssp CCEEEETTTSTT----H----HHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH-
T ss_pred cEEEEEcCCchh----H----HHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH-
Confidence 568888877653 3 345555555678877766653 11 1 000 00001233 333443322 344
Q ss_pred CCCccEEEecCChh
Q psy16939 102 HPNLRLFITHGGIS 115 (174)
Q Consensus 102 ~~~~~~~I~hgG~~ 115 (174)
..+|.+|+-+|..
T Consensus 76 -~~~d~vi~~a~~~ 88 (321)
T 3c1o_A 76 -KQVDIVISALPFP 88 (321)
T ss_dssp -TTCSEEEECCCGG
T ss_pred -cCCCEEEECCCcc
Confidence 6799999988753
No 254
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=24.01 E-value=1.2e+02 Score=18.09 Aligned_cols=106 Identities=8% Similarity=0.080 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH--cCC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS--LGV 125 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~--~g~ 125 (174)
.......+...+...++.+.......+.-+..+ ..+..+.+.++ +|...-+ .+.+.+. ...
T Consensus 11 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlii~D~~~p~~~g~---------------~~~~~lr~~~~~ 74 (120)
T 3f6p_A 11 EKPIADILEFNLRKEGYEVHCAHDGNEAVEMVE-ELQPDLILLDIMLPNKDGV---------------EVCREVRKKYDM 74 (120)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHH-TTCCSEEEEETTSTTTHHH---------------HHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHh-hCCCCEEEEeCCCCCCCHH---------------HHHHHHHhcCCC
Confidence 345566666777777887665433222111111 23445666665 3433211 1222222 357
Q ss_pred CeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 126 PVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 126 P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|++++-...+.. ......+.|+--.+. +.++.+++..++++++..
T Consensus 75 ~ii~~t~~~~~~-~~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~l~~ 119 (120)
T 3f6p_A 75 PIIMLTAKDSEI-DKVIGLEIGADDYVT-KPFSTRELLARVKANLRR 119 (120)
T ss_dssp CEEEEEESSCHH-HHHHHHHTTCCEEEE-ESCCHHHHHHHHHHHHTC
T ss_pred CEEEEECCCChH-HHHHHHhCCcceeEc-CCCCHHHHHHHHHHHHhc
Confidence 877775544443 334455677765554 356889999999988753
No 255
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=24.00 E-value=2e+02 Score=20.65 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCc-hhhhcCCCccEEEecCChh-----hHHHHH
Q psy16939 48 LSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQ-TDILAHPNLRLFITHGGIS-----SLMEAS 121 (174)
Q Consensus 48 ~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~-~~~l~~~~~~~~I~hgG~~-----t~~eal 121 (174)
.-..+...+.+++++.++.+++.......... ... ..+.. ..+|.+|..+... .+.++.
T Consensus 16 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~--------------~~~i~~l~~-~~vdgiIi~~~~~~~~~~~~~~~~ 80 (313)
T 3m9w_A 16 RWQKDRDIFVKKAESLGAKVFVQSANGNEETQ--------------MSQIENMIN-RGVDVLVIIPYNGQVLSNVVKEAK 80 (313)
T ss_dssp TTHHHHHHHHHHHHHTSCEEEEEECTTCHHHH--------------HHHHHHHHH-TTCSEEEEECSSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECCCCCHHHH--------------HHHHHHHHH-cCCCEEEEeCCChhhhHHHHHHHH
Confidence 35778888888888899988776543222100 000 11121 4566666555322 244445
Q ss_pred HcCCCeEec
Q psy16939 122 SLGVPVLGV 130 (174)
Q Consensus 122 ~~g~P~i~v 130 (174)
..|+|++.+
T Consensus 81 ~~~iPvV~~ 89 (313)
T 3m9w_A 81 QEGIKVLAY 89 (313)
T ss_dssp TTTCEEEEE
T ss_pred HCCCeEEEE
Confidence 578888877
No 256
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=23.85 E-value=1.7e+02 Score=19.57 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~g 124 (174)
.......+...|...++.+..........+... ..+..+.+.++ +|..+ |. .+.+.+. .+
T Consensus 13 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvl~D~~lp~~~--------------g~-~~~~~l~~~~~~ 76 (208)
T 1yio_A 13 DMSVREGLRNLLRSAGFEVETFDCASTFLEHRR-PEQHGCLVLDMRMPGMS--------------GI-ELQEQLTAISDG 76 (208)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHCC-TTSCEEEEEESCCSSSC--------------HH-HHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhCCceEEEcCCHHHHHHhhh-ccCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcCCC
Confidence 455566667777777777664332221111101 22345555554 33211 11 2233332 35
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
+|+|++--..+.. .....-+.|+--.+. +.++.++|..+++.++
T Consensus 77 ~~ii~ls~~~~~~-~~~~a~~~Ga~~~l~-Kp~~~~~L~~~i~~~~ 120 (208)
T 1yio_A 77 IPIVFITAHGDIP-MTVRAMKAGAIEFLP-KPFEEQALLDAIEQGL 120 (208)
T ss_dssp CCEEEEESCTTSC-CCHHHHHTTEEEEEE-SSCCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHH-HHHHHHHCCCcEEEe-CCCCHHHHHHHHHHHH
Confidence 7777774433322 223334566655553 3457777777777665
No 257
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=23.83 E-value=2.3e+02 Score=21.07 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=40.3
Q ss_pred cCCchhhhcCCCccEEEecCChhh----HHHHHHcCCCeEec-cccc--hH-HHHHHHHHHcCceeEec
Q psy16939 93 WYPQTDILAHPNLRLFITHGGISS----LMEASSLGVPVLGV-PFFG--DQ-YRNMVLLRHRGYALIEP 153 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~t----~~eal~~g~P~i~v-P~~~--dQ-~~na~~l~~~G~g~~l~ 153 (174)
+-+..+++..+.+|+++.---... +.+++.+|+++++= |... ++ ..-....++.|.-+.+.
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 56 YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 446677886668999887655444 67889999998875 7532 33 33344555677766654
No 258
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=23.61 E-value=1.7e+02 Score=19.53 Aligned_cols=47 Identities=13% Similarity=0.097 Sum_probs=28.5
Q ss_pred HHHHHHHhc-----CC-CCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhCCCcEE
Q psy16939 21 SDLQQRADA-----AK-GGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIF 68 (174)
Q Consensus 21 ~~~~~~~~~-----~~-~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~~~~~i 68 (174)
+.+..|++. .. +++.+++.|... .. .........+.+.+...+.+++
T Consensus 72 ~~~~~fl~~l~~~~l~gk~~a~fg~g~~~~y~-~~~~~a~~~l~~~l~~~G~~~~ 125 (179)
T 1yob_A 72 ESWEEFLPKIEGLDFSGKTVALFGLGDQVGYP-ENYLDALGELYSFFKDRGAKIV 125 (179)
T ss_dssp CCHHHHHHHHTTCCCTTCEEEEEEECCTTTCT-TTTTHHHHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHhhhcccCCCEEEEEEECCCcchh-HHHHHHHHHHHHHHHHCCCEEE
Confidence 667777752 22 566666665543 11 1134567788888888887765
No 259
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=23.50 E-value=1.1e+02 Score=21.81 Aligned_cols=34 Identities=6% Similarity=-0.170 Sum_probs=25.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 8 ~k~vlVTGas~GI--------G~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 8 NRTIVVAGAGRDI--------GRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCchH--------HHHHHHHHHHCCCEEEEEcCC
Confidence 4789999888753 456777788889998876443
No 260
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=23.43 E-value=49 Score=24.40 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=29.8
Q ss_pred HHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHH---HhhCCCcEEEEecC
Q psy16939 23 LQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEV---FKQLKLPIFWKIDI 73 (174)
Q Consensus 23 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~---l~~~~~~~i~~~~~ 73 (174)
...|+.....+.+++-+|+.... ..+.+..+.+. +.+.+.++++++++
T Consensus 12 ~~pyi~~~~~~~iViKlGGs~l~---~~~~~~~~~~~i~~l~~~G~~vVlVhGg 62 (282)
T 2bty_A 12 ALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGG 62 (282)
T ss_dssp HHHHHHHHTTCEEEEEECSHHHH---SHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHhcCCeEEEEECchhhC---ChhHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 34455554457899999998652 34444445443 44557788877775
No 261
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=23.13 E-value=92 Score=21.64 Aligned_cols=33 Identities=3% Similarity=-0.045 Sum_probs=23.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||.+. -..+...|.+.+++++.....
T Consensus 2 k~vlVTGas~gI--------G~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASSGL--------GAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp -CEEEESTTSHH--------HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEecCCchH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 478898888753 456677777788888776654
No 262
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=23.03 E-value=2e+02 Score=20.75 Aligned_cols=42 Identities=5% Similarity=-0.103 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCcCCC----CCCHHHHHHHHHHHhh--CCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPT----KLSEETKLGFLEVFKQ--LKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~----~~~~~~~~~i~~~l~~--~~~~~i~~~~~ 73 (174)
.+.++|-+|+..... ....+.+..+++.++. .+.+++++.++
T Consensus 24 ~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~~g~~vVlVhGg 71 (256)
T 2va1_A 24 KQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGG 71 (256)
T ss_dssp CSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred cCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 367999999887642 1235667777776665 57788888864
No 263
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=23.03 E-value=1.2e+02 Score=22.11 Aligned_cols=35 Identities=14% Similarity=0.010 Sum_probs=26.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
.++++|+.||.+. -..+.+.|.+.+++++......
T Consensus 9 ~k~vlVTGas~GI--------G~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 9 GKTMFISGGSRGI--------GLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TCEEEEESCSSHH--------HHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECCh
Confidence 4789999988753 5667788888899888776653
No 264
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=23.01 E-value=1.3e+02 Score=21.68 Aligned_cols=56 Identities=11% Similarity=-0.024 Sum_probs=36.0
Q ss_pred hHHHHHHcCCCeEeccccch--HH--HHHHHHHHc---------CceeEecC-CCCCHHHHHHHHHHhhc
Q psy16939 116 SLMEASSLGVPVLGVPFFGD--QY--RNMVLLRHR---------GYALIEPI-QTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 116 t~~eal~~g~P~i~vP~~~d--Q~--~na~~l~~~---------G~g~~l~~-~~~~~~~l~~al~~ll~ 171 (174)
.+..++.+++.+...-...| .. .|....+.+ |+|.+-.. ...+.+++.+.+++.+.
T Consensus 82 ~i~~li~~~I~ly~~HtnlD~~~~~G~n~~La~~Lgl~~~~~~~g~G~ig~l~~~~t~~~l~~~vk~~l~ 151 (247)
T 1nmo_A 82 RLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLG 151 (247)
T ss_dssp HHHHHHHTTCEEEECCHHHHHCTTTSHHHHHHHHHTEEEEEEEETTEEEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEeeechhhCCCCCHHHHHHHHcCCCCccccCCeEEEEEeCCCCcHHHHHHHHHHHcC
Confidence 47778889999888844333 32 455554555 45554222 24688999999988774
No 265
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=22.99 E-value=1e+02 Score=22.25 Aligned_cols=34 Identities=9% Similarity=0.035 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 27 ~k~~lVTGas~GI--------G~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 27 DKVAFITGGGSGI--------GFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEeCCCchH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988753 566778888889988876654
No 266
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=22.97 E-value=1.1e+02 Score=21.97 Aligned_cols=75 Identities=8% Similarity=-0.031 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-ccccccCCCCCEEEe--ecCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-PVLNAKTLPDNVFIQ--KWYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~nv~~~--~~~p~~~---~l~---- 101 (174)
.++++|+.||.+. -..+.+.|.+.+++++........ .+..+ ....++... +..+... ++.
T Consensus 11 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 11 NKVAIITGACGGI--------GLETSRVLARAGARVVLADLPETDLAGAAA-SVGRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEECTTSCHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHH--------HHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 4789999988754 556777888889988776654331 11111 112222222 2222211 111
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 82 ~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 82 TFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 14689999999864
No 267
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.94 E-value=1.5e+02 Score=18.81 Aligned_cols=37 Identities=14% Similarity=-0.088 Sum_probs=27.4
Q ss_pred hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE
Q psy16939 115 SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151 (174)
Q Consensus 115 ~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~ 151 (174)
..+-|+...|++.+.+-...+|..-.+..++.|+-++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp GGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEE
Confidence 4578889999998766444567777788888887654
No 268
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=22.80 E-value=1e+02 Score=22.36 Aligned_cols=75 Identities=9% Similarity=0.029 Sum_probs=43.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeec--CCchh---hhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKW--YPQTD---ILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~--~p~~~---~l~~-~~ 104 (174)
.++++|+.||.+. -..+++.|.+.+++++....... ..+..+ ....++..... .+... +... ..
T Consensus 16 gk~vlVTGas~gI--------G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 86 (291)
T 3rd5_A 16 QRTVVITGANSGL--------GAVTARELARRGATVIMAVRDTRKGEAAAR-TMAGQVEVRELDLQDLSSVRRFADGVSG 86 (291)
T ss_dssp TCEEEEECCSSHH--------HHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TSSSEEEEEECCTTCHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCChH--------HHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhcCCeeEEEcCCCCHHHHHHHHHhcCC
Confidence 4789999988753 45677777888998887765422 111111 23344444432 22222 2211 36
Q ss_pred ccEEEecCChh
Q psy16939 105 LRLFITHGGIS 115 (174)
Q Consensus 105 ~~~~I~hgG~~ 115 (174)
.|++|+.+|..
T Consensus 87 iD~lv~nAg~~ 97 (291)
T 3rd5_A 87 ADVLINNAGIM 97 (291)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCcCC
Confidence 79999999963
No 269
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=22.75 E-value=1.2e+02 Score=21.13 Aligned_cols=34 Identities=9% Similarity=-0.132 Sum_probs=25.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.||... -..+.+.|.+.+++++.....
T Consensus 7 ~k~vlVTGas~gI--------G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGAL--------GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcHH--------HHHHHHHHHhCCCEEEEEeCC
Confidence 4689999888753 566777788889988776654
No 270
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=22.75 E-value=1.1e+02 Score=21.51 Aligned_cols=33 Identities=3% Similarity=-0.213 Sum_probs=24.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||.+. -..+...|.+.+++++.....
T Consensus 4 k~vlVTGas~GI--------G~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 4 GHIIVTGAGSGL--------GRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 688999888754 556777777889988776654
No 271
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=22.54 E-value=2.3e+02 Score=20.77 Aligned_cols=73 Identities=3% Similarity=-0.128 Sum_probs=39.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Ccc-ccccCCCCCEEEeec-CCchhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPV-LNAKTLPDNVFIQKW-YPQTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~-~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~ 108 (174)
.+.|+|+.||... -..+++.|.+.+++++....... ..+ +.......++.+..- +-. ..+ ..+|++
T Consensus 27 ~~~vlVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~--~~~d~v 95 (343)
T 2b69_A 27 RKRILITGGAGFV--------GSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-PLY--IEVDQI 95 (343)
T ss_dssp CCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-CCC--CCCSEE
T ss_pred CCEEEEEcCccHH--------HHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCC-hhh--cCCCEE
Confidence 4689999887753 34555566666888777654321 110 100011234444332 111 123 569999
Q ss_pred EecCChh
Q psy16939 109 ITHGGIS 115 (174)
Q Consensus 109 I~hgG~~ 115 (174)
||-+|..
T Consensus 96 ih~A~~~ 102 (343)
T 2b69_A 96 YHLASPA 102 (343)
T ss_dssp EECCSCC
T ss_pred EECcccc
Confidence 9998854
No 272
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=22.48 E-value=2.6e+02 Score=21.26 Aligned_cols=110 Identities=7% Similarity=-0.061 Sum_probs=54.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEecCCh---hhHHHHHHcCCCeE
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFITHGGI---SSLMEASSLGVPVL 128 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~hgG~---~t~~eal~~g~P~i 128 (174)
-..++.++.+.|++++........+.. ...+.....++.+...+... ..+|++....+. ..+......|.
T Consensus 26 g~~la~aa~~~G~~vi~~d~~~~~~~~---~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~e~~~~~~~~~l~~~g~--- 99 (389)
T 3q2o_A 26 GRMMALAAKEMGYKIAVLDPTKNSPCA---QVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAY--- 99 (389)
T ss_dssp HHHHHHHHHHTTCEEEEEESSTTCTTT---TTCSEEEECCTTCHHHHHHHHHTCSEEEESCCCCCHHHHHHHHHHSC---
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCCchH---HhCCceEecCcCCHHHHHHHHHhCCEeeeccccccHHHHHHHHhhCc---
Confidence 566788888999998877544332211 33445555666653332211 457876544332 22333333443
Q ss_pred eccc------cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHH
Q psy16939 129 GVPF------FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 129 ~vP~------~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ 168 (174)
+.|. ..|-..-...++++|+-..-...-.+.+++.+++++
T Consensus 100 ~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~ 145 (389)
T 3q2o_A 100 LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAE 145 (389)
T ss_dssp CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHH
T ss_pred cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHh
Confidence 2232 234444455666677654311111145555555544
No 273
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=22.46 E-value=1.2e+02 Score=20.56 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=22.5
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLK 64 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~ 64 (174)
.+|+++||-.. .+...++..++.|++.+
T Consensus 2 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCcc---CHHHHHHHHHHHHhcCC
Confidence 58999999864 36778888888888765
No 274
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=22.39 E-value=1.4e+02 Score=18.17 Aligned_cols=105 Identities=10% Similarity=0.153 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH---cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS---LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~g 124 (174)
.......+.+.|.+.++.+..........+..+ ..+..+.+.++ .|... |. .+.+.+. ..
T Consensus 16 ~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~-~~~~dlvi~d~~l~~~~--------------g~-~~~~~l~~~~~~ 79 (137)
T 3hdg_A 16 DTDAREWLSTIISNHFPEVWSAGDGEEGERLFG-LHAPDVIITDIRMPKLG--------------GL-EMLDRIKAGGAK 79 (137)
T ss_dssp CHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHH-HHCCSEEEECSSCSSSC--------------HH-HHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHh-ccCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcCCC
Confidence 344566666677765666555443322111111 12344555554 22211 11 2333333 36
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.|++++....+... .....+.|+--.+. +.++.++|..++++++.
T Consensus 80 ~~ii~~s~~~~~~~-~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 80 PYVIVISAFSEMKY-FIKAIELGVHLFLP-KPIEPGRLMETLEDFRH 124 (137)
T ss_dssp CEEEECCCCCCHHH-HHHHHHHCCSEECC-SSCCHHHHHHHHHHHHH
T ss_pred CcEEEEecCcChHH-HHHHHhCCcceeEc-CCCCHHHHHHHHHHHHH
Confidence 77777755444333 34445667766664 45789999999998875
No 275
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=22.29 E-value=1.5e+02 Score=22.54 Aligned_cols=98 Identities=8% Similarity=-0.011 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+.+-+|.+|.++. .+...+...+.+++......... .... ....+.+..+++ +.+|+++.|
T Consensus 141 ~tvGIIGlG~IG~----------~vA~~l~~~G~~V~~~dr~~~~~-----~~~~--~~~~~~~l~ell--~~aDvV~l~ 201 (324)
T 3hg7_A 141 RTLLILGTGSIGQ----------HIAHTGKHFGMKVLGVSRSGRER-----AGFD--QVYQLPALNKML--AQADVIVSV 201 (324)
T ss_dssp CEEEEECCSHHHH----------HHHHHHHHTTCEEEEECSSCCCC-----TTCS--EEECGGGHHHHH--HTCSEEEEC
T ss_pred ceEEEEEECHHHH----------HHHHHHHhCCCEEEEEcCChHHh-----hhhh--cccccCCHHHHH--hhCCEEEEe
Confidence 5677888888743 45666677788876543322111 1111 123345566777 779999999
Q ss_pred CChhhHHHH------HHcCCC-eEecc--c--cchHHHHHHHHHHcCc
Q psy16939 112 GGISSLMEA------SSLGVP-VLGVP--F--FGDQYRNMVLLRHRGY 148 (174)
Q Consensus 112 gG~~t~~ea------l~~g~P-~i~vP--~--~~dQ~~na~~l~~~G~ 148 (174)
.-.+.-.+. +..=+| .++|- . ..|+..-+..+++.++
T Consensus 202 lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i 249 (324)
T 3hg7_A 202 LPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKL 249 (324)
T ss_dssp CCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSS
T ss_pred CCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCc
Confidence 764321111 111112 23321 1 2467777777776544
No 276
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=22.25 E-value=1.3e+02 Score=17.88 Aligned_cols=106 Identities=11% Similarity=0.127 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH-----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS----- 122 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~----- 122 (174)
.......+...+...++.+..........+... .....+.+.++ .|... |. .+.+.+.
T Consensus 11 ~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~-~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~ 74 (127)
T 2jba_A 11 EAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLN-EPWPDLILLAWMLPGGS--------------GI-QFIKHLRRESMT 74 (127)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHTTCS-SSCCSEEEEESEETTEE--------------HH-HHHHHHHTSTTT
T ss_pred CHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHh-ccCCCEEEEecCCCCCC--------------HH-HHHHHHHhCccc
Confidence 344556666677777777654433221111101 22334555543 22111 22 2344443
Q ss_pred cCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 123 LGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 123 ~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++++-...+. .......+.|+--.+. +.++.+++..++++++..
T Consensus 75 ~~~~ii~~s~~~~~-~~~~~~~~~ga~~~l~-Kp~~~~~l~~~i~~~~~~ 122 (127)
T 2jba_A 75 RDIPVVMLTARGEE-EDRVRGLETGADDCIT-KPFSPKELVARIKAVMRR 122 (127)
T ss_dssp TTSCEEEEEETTHH-HHHHTTCCCSCSEEEE-ESCCHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCH-HHHHHHHhcCCCeEEe-CCCCHHHHHHHHHHHHhc
Confidence 36788887544332 2333333456544443 346889999999888753
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=22.15 E-value=1.5e+02 Score=18.35 Aligned_cols=109 Identities=10% Similarity=0.039 Sum_probs=51.1
Q ss_pred HHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEeecCCchhhhc--CCCccEEEecCChh-hH-----HHHHHcC
Q psy16939 54 LGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILA--HPNLRLFITHGGIS-SL-----MEASSLG 124 (174)
Q Consensus 54 ~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~--~~~~~~~I~hgG~~-t~-----~eal~~g 124 (174)
..+++.|...+++++....... ...+. .....+...+..+...+.. ...+|++|.-.|.. .. ..+-..|
T Consensus 19 ~~~a~~l~~~g~~v~~~d~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 19 GSIVKELHRMGHEVLAVDINEEKVNAYA--SYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp HHHHHHHHHTTCCCEEEESCHHHHHTTT--TTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH--HhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcC
Confidence 3456666777877666544321 11110 1112222223222222211 14689999887753 21 2233456
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNA 166 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al 166 (174)
.+.++.-.... .+...+.+.|+..++.+.......+.+.+
T Consensus 97 ~~~ii~~~~~~--~~~~~l~~~g~~~vi~p~~~~~~~l~~~~ 136 (144)
T 2hmt_A 97 IPNIWVKAQNY--YHHKVLEKIGADRIIHPEKDMGVKIAQSL 136 (144)
T ss_dssp CSEEEEECCSH--HHHHHHHHHTCSEEECHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCH--HHHHHHHHcCCCEEECccHHHHHHHHHHH
Confidence 66444332222 22456778898877754433334444433
No 278
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.12 E-value=1.4e+02 Score=18.01 Aligned_cols=105 Identities=10% Similarity=0.125 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHHc----
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASSL---- 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~~---- 123 (174)
.......+...|.+.++.+.......+..+... ..+..+.+.++ .|... | -.+.+.+..
T Consensus 15 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~-~~~~dlii~d~~l~~~~--------------g-~~~~~~l~~~~~~ 78 (132)
T 3lte_A 15 DQAMAAAIERVLKRDHWQVEIAHNGFDAGIKLS-TFEPAIMTLDLSMPKLD--------------G-LDVIRSLRQNKVA 78 (132)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHH-HTCCSEEEEESCBTTBC--------------H-HHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHH-hcCCCEEEEecCCCCCC--------------H-HHHHHHHHhcCcc
Confidence 345566667777777777665433322111111 22345555554 22211 1 234444442
Q ss_pred -CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 124 -GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 124 -g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..|++++....+. ......+.|+--.+. +.++.++|..+|++....
T Consensus 79 ~~~~ii~~~~~~~~--~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 79 NQPKILVVSGLDKA--KLQQAVTEGADDYLE-KPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp SCCEEEEECCSCSH--HHHHHHHHTCCEEEC-SSCCHHHHHHHHHHHHC-
T ss_pred CCCeEEEEeCCChH--HHHHHHHhChHHHhh-CCCCHHHHHHHHHHHcCC
Confidence 2333444333333 344555667766664 457899999999988754
No 279
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=22.12 E-value=1.2e+02 Score=21.84 Aligned_cols=35 Identities=9% Similarity=-0.095 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
.++++|+.|+.+. -..+...|.+.+++++......
T Consensus 6 ~k~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 6 GKTLFITGASRGI--------GLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESCC
T ss_pred CcEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeccc
Confidence 4789999988753 5567777888899888776543
No 280
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=22.08 E-value=54 Score=24.44 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=29.0
Q ss_pred HHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHH---hhCCCcEEEEecC
Q psy16939 24 QQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVF---KQLKLPIFWKIDI 73 (174)
Q Consensus 24 ~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l---~~~~~~~i~~~~~ 73 (174)
..|+.....+.+++-+|+.... ..+.+..+++.+ .+.+.++++++++
T Consensus 17 ~pyi~~~~~k~iViKlGGs~l~---~~~~~~~~~~~i~~l~~~G~~vViVhGg 66 (299)
T 2ap9_A 17 LPWLKQLHGKVVVVKYGGNAMT---DDTLRRAFAADMAFLRNCGIHPVVVHGG 66 (299)
T ss_dssp HHHHHHHTTCEEEEEECTHHHH---SHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHhCCCeEEEEECchhhC---CchHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 3355444446899999998652 344454555443 4457788877775
No 281
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=22.07 E-value=1.4e+02 Score=21.21 Aligned_cols=82 Identities=12% Similarity=0.076 Sum_probs=44.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCc-hhhhcCCCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQ-TDILAHPNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~-~~~l~~~~~~~~I~ 110 (174)
...|-+.+.+... ..-..+...+.+++++.++.+++.......... ... ..+.. ..+|.+|.
T Consensus 8 ~~~Ig~i~~~~~~--~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~--------------~~~~~~l~~-~~vdgiI~ 70 (293)
T 3l6u_A 8 RNIVGFTIVNDKH--EFAQRLINAFKAEAKANKYEALVATSQNSRISE--------------REQILEFVH-LKVDAIFI 70 (293)
T ss_dssp -CEEEEEESCSCS--HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHH--------------HHHHHHHHH-TTCSEEEE
T ss_pred CcEEEEEEecCCc--HHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHH--------------HHHHHHHHH-cCCCEEEE
Confidence 3455555544422 123566777778888889988876543322110 000 11122 45676666
Q ss_pred cCChhh-----HHHHHHcCCCeEec
Q psy16939 111 HGGISS-----LMEASSLGVPVLGV 130 (174)
Q Consensus 111 hgG~~t-----~~eal~~g~P~i~v 130 (174)
.+.... +.++...|+|++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 71 TTLDDVYIGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp ECSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred ecCChHHHHHHHHHHHHcCCCEEEe
Confidence 544222 34455679999987
No 282
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=22.06 E-value=2e+02 Score=19.82 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH--cCC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS--LGV 125 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~--~g~ 125 (174)
.......+...|...++.+.......+..+... .....+.+.++ +|... |. .+.+.+. ..+
T Consensus 14 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~-~~~~dlvilD~~l~~~~--------------g~-~~~~~lr~~~~~ 77 (238)
T 2gwr_A 14 DASLAEMLTIVLRGEGFDTAVIGDGTQALTAVR-ELRPDLVLLDLMLPGMN--------------GI-DVCRVLRADSGV 77 (238)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH-HHCCSEEEEESSCSSSC--------------HH-HHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH-hCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhCCCC
Confidence 345566666677777777654433322111111 12345555554 23211 11 2333333 267
Q ss_pred CeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 126 PVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 126 P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|+|++-...+... ....-+.|+--.+. +.++.++|..+++.++..
T Consensus 78 ~ii~lt~~~~~~~-~~~~~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~ 122 (238)
T 2gwr_A 78 PIVMLTAKTDTVD-VVLGLESGADDYIM-KPFKPKELVARVRARLRR 122 (238)
T ss_dssp CEEEEEETTCCSC-HHHHHHTTCCEEEE-ESCCHHHHHHHHHHHCCC
T ss_pred cEEEEeCCCCHHH-HHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHhh
Confidence 8887754333222 23334566655553 346889999999888754
No 283
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=21.95 E-value=2.2e+02 Score=20.25 Aligned_cols=65 Identities=9% Similarity=0.042 Sum_probs=35.2
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEE--eecCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFI--QKWYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~--~~~~p~~---~~l~~~~~~~ 107 (174)
..|+|+ |+ +. +-..+++.|.+.+++++........ .+.++.+ .+..+.. .++. ..+|+
T Consensus 4 ~~ilVt-Ga-G~-------iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~ 66 (286)
T 3gpi_A 4 SKILIA-GC-GD-------LGLELARRLTAQGHEVTGLRRSAQP-------MPAGVQTLIADVTRPDTLASIVH-LRPEI 66 (286)
T ss_dssp CCEEEE-CC-SH-------HHHHHHHHHHHTTCCEEEEECTTSC-------CCTTCCEEECCTTCGGGCTTGGG-GCCSE
T ss_pred CcEEEE-CC-CH-------HHHHHHHHHHHCCCEEEEEeCCccc-------cccCCceEEccCCChHHHHHhhc-CCCCE
Confidence 457777 45 33 2445666666678888777664321 1223322 2332222 2331 24999
Q ss_pred EEecCCh
Q psy16939 108 FITHGGI 114 (174)
Q Consensus 108 ~I~hgG~ 114 (174)
+||-+|.
T Consensus 67 vih~a~~ 73 (286)
T 3gpi_A 67 LVYCVAA 73 (286)
T ss_dssp EEECHHH
T ss_pred EEEeCCC
Confidence 9998875
No 284
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=21.82 E-value=2.3e+02 Score=20.44 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=37.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCch---hhhcCCCccEE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQT---DILAHPNLRLF 108 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~---~~l~~~~~~~~ 108 (174)
+.|+|+.||... -..+++.|.+.+++++...+..... .. .++.+... +... .++ ..+|++
T Consensus 3 ~~vlVtGatG~i--------G~~l~~~L~~~g~~V~~~~r~~~~~-----~~-~~~~~~~~Dl~~~~~~~~~--~~~d~V 66 (311)
T 3m2p_A 3 LKIAVTGGTGFL--------GQYVVESIKNDGNTPIILTRSIGNK-----AI-NDYEYRVSDYTLEDLINQL--NDVDAV 66 (311)
T ss_dssp CEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCCHHHHHHHT--TTCSEE
T ss_pred CEEEEECCCcHH--------HHHHHHHHHhCCCEEEEEeCCCCcc-----cC-CceEEEEccccHHHHHHhh--cCCCEE
Confidence 578888877753 4455666666788887777652221 11 13332221 2222 234 579999
Q ss_pred EecCCh
Q psy16939 109 ITHGGI 114 (174)
Q Consensus 109 I~hgG~ 114 (174)
||-+|.
T Consensus 67 ih~a~~ 72 (311)
T 3m2p_A 67 VHLAAT 72 (311)
T ss_dssp EECCCC
T ss_pred EEcccc
Confidence 998885
No 285
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=21.78 E-value=2.3e+02 Score=21.67 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=41.2
Q ss_pred cCCchhhhcCCCccEEEecCChh----hHHHHHHcCCCeEec-cccc---hHHHHHHHHHHcCceeEec
Q psy16939 93 WYPQTDILAHPNLRLFITHGGIS----SLMEASSLGVPVLGV-PFFG---DQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~----t~~eal~~g~P~i~v-P~~~---dQ~~na~~l~~~G~g~~l~ 153 (174)
|-+..+++..+.+|+++.---.. .+.+++.+|+++++= |+.. |-..-....++.|.-+.+.
T Consensus 53 ~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 121 (387)
T 3moi_A 53 FATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVG 121 (387)
T ss_dssp ESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred ECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEE
Confidence 45667787667799998755543 477899999999875 7532 3333445556677766654
No 286
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=21.78 E-value=1.1e+02 Score=24.98 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=24.1
Q ss_pred CCccEEEecCCh------hhHHHHHHcCCCeEecc
Q psy16939 103 PNLRLFITHGGI------SSLMEASSLGVPVLGVP 131 (174)
Q Consensus 103 ~~~~~~I~hgG~------~t~~eal~~g~P~i~vP 131 (174)
.+..+++++.|. +.+.||-+.++|+|++.
T Consensus 71 g~pgv~~~TsGpG~~N~~~~i~~A~~~~vPll~it 105 (568)
T 2c31_A 71 GKPGVCLTVSAPGFLNGVTSLAHATTNCFPMILLS 105 (568)
T ss_dssp SSCEEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 456788999996 55679999999999994
No 287
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.78 E-value=1.3e+02 Score=21.46 Aligned_cols=34 Identities=6% Similarity=-0.154 Sum_probs=25.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 11 ~k~vlVTGas~gI--------G~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPAL--------GTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTTH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcHH--------HHHHHHHHHHCcCEEEEEeCC
Confidence 4789999988753 456777777889988776654
No 288
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.76 E-value=1.1e+02 Score=22.26 Aligned_cols=33 Identities=6% Similarity=-0.151 Sum_probs=25.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
.++++|+.||.+. -..+...|.+.++++++...
T Consensus 25 ~k~~lVTGas~GI--------G~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSGI--------GLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSHH--------HHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEeC
Confidence 4789999988764 55677778888998877654
No 289
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.70 E-value=1.3e+02 Score=21.24 Aligned_cols=70 Identities=9% Similarity=-0.023 Sum_probs=39.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe-ecCCc-hhhhc-CCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ-KWYPQ-TDILA-HPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~-~~~p~-~~~l~-~~~~~~~ 108 (174)
.++++|+.||.+. -..+.+.|.+.+++++........ .. ... ++... +.... ..+.. ....|++
T Consensus 19 ~k~vlVTGas~gI--------G~~~a~~l~~~G~~V~~~~r~~~~--~~--~~~-~~~~~~D~~~~~~~~~~~~~~iD~l 85 (249)
T 1o5i_A 19 DKGVLVLAASRGI--------GRAVADVLSQEGAEVTICARNEEL--LK--RSG-HRYVVCDLRKDLDLLFEKVKEVDIL 85 (249)
T ss_dssp TCEEEEESCSSHH--------HHHHHHHHHHTTCEEEEEESCHHH--HH--HTC-SEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEcCCHHH--HH--hhC-CeEEEeeHHHHHHHHHHHhcCCCEE
Confidence 5789999988764 455677777788887776554211 11 122 33332 22111 11221 1268999
Q ss_pred EecCCh
Q psy16939 109 ITHGGI 114 (174)
Q Consensus 109 I~hgG~ 114 (174)
|+.+|.
T Consensus 86 v~~Ag~ 91 (249)
T 1o5i_A 86 VLNAGG 91 (249)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
No 290
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=21.69 E-value=86 Score=22.30 Aligned_cols=34 Identities=6% Similarity=-0.156 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.+++++.....
T Consensus 7 ~k~~lVTGas~GI--------G~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 7 KGLAIITGASQGI--------GAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CCEEEEESTTSHH--------HHHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCcHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 4789999988764 456666777778888776654
No 291
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.68 E-value=93 Score=22.47 Aligned_cols=33 Identities=9% Similarity=-0.096 Sum_probs=24.1
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||.+. -..+.+.|.+.|+++++....
T Consensus 5 k~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGASGGI--------GEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCccHH--------HHHHHHHHHHCCCEEEEEECC
Confidence 688888888753 456777777788887776554
No 292
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=21.44 E-value=1.1e+02 Score=22.19 Aligned_cols=34 Identities=6% Similarity=-0.100 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.||.+. -..+.+.|.+.+++++.....
T Consensus 24 ~k~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSGI--------GLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988764 556777777889998776654
No 293
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=21.36 E-value=2.1e+02 Score=20.35 Aligned_cols=42 Identities=2% Similarity=-0.098 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCcCCC----CCCHHHHHHHHHHHh---hCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPT----KLSEETKLGFLEVFK---QLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~----~~~~~~~~~i~~~l~---~~~~~~i~~~~~ 73 (174)
.+.+++-+|+..... ....+.+..+++.++ +.+.+++++.++
T Consensus 8 ~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGg 56 (247)
T 2a1f_A 8 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGG 56 (247)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999987632 124566777766655 446788888765
No 294
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.35 E-value=1.2e+02 Score=21.72 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.+++++.....
T Consensus 8 ~k~~lVTGas~GI--------G~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSGI--------GLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999888753 556777777889987776554
No 295
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=21.35 E-value=90 Score=23.09 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=34.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecCCC-CccccccCCCCCEEEeecCCchhhhcCCCccEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDITN-DPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFI 109 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~~~-~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I 109 (174)
+.++++..|.. -..++.+|.+.+. ++.+..+... .. .+...+....+-.....+ ..+|++|
T Consensus 118 k~vlvlGaGg~----------g~aia~~L~~~G~~~v~v~~R~~~~a~-----~la~~~~~~~~~~~~~~~--~~aDiVI 180 (277)
T 3don_A 118 AYILILGAGGA----------SKGIANELYKIVRPTLTVANRTMSRFN-----NWSLNINKINLSHAESHL--DEFDIII 180 (277)
T ss_dssp CCEEEECCSHH----------HHHHHHHHHTTCCSCCEEECSCGGGGT-----TCCSCCEEECHHHHHHTG--GGCSEEE
T ss_pred CEEEEECCcHH----------HHHHHHHHHHCCCCEEEEEeCCHHHHH-----HHHHhcccccHhhHHHHh--cCCCEEE
Confidence 45666655543 5567778888887 5555433321 12 222333333332233334 6799999
Q ss_pred ecCChh
Q psy16939 110 THGGIS 115 (174)
Q Consensus 110 ~hgG~~ 115 (174)
+--..|
T Consensus 181 naTp~G 186 (277)
T 3don_A 181 NTTPAG 186 (277)
T ss_dssp ECCC--
T ss_pred ECccCC
Confidence 654433
No 296
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.33 E-value=1.2e+02 Score=20.96 Aligned_cols=33 Identities=3% Similarity=-0.185 Sum_probs=23.9
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.|+.+. -..+.+.|.+.+++++.....
T Consensus 3 k~vlITGas~gI--------G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 3 KVAVITGASRGI--------GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CEEEEESCSSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 678898888753 456677777788887776554
No 297
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=21.28 E-value=1.9e+02 Score=20.74 Aligned_cols=42 Identities=2% Similarity=-0.132 Sum_probs=29.1
Q ss_pred CCeEEEEcCCCcCCCC----CCHHHHHHHHHHHhh---CCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTK----LSEETKLGFLEVFKQ---LKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~----~~~~~~~~i~~~l~~---~~~~~i~~~~~ 73 (174)
.++|++-+|+.....+ +..+.++.+.+.++. .+.++++++++
T Consensus 9 ~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gG 57 (243)
T 3ek6_A 9 YRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGG 57 (243)
T ss_dssp CSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 4689999988776431 346777777776554 47788888764
No 298
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.09 E-value=98 Score=21.65 Aligned_cols=34 Identities=3% Similarity=-0.094 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.+++++.....
T Consensus 14 ~k~vlITGas~gI--------G~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGI--------GAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChH--------HHHHHHHHHHCCCEEEEEecC
Confidence 4789998888753 456777777889988776654
No 299
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=21.08 E-value=1.5e+02 Score=22.61 Aligned_cols=48 Identities=10% Similarity=0.120 Sum_probs=28.1
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
-++..++..-+++|+-++|+...+. ....+++.+.++.++ ..++....
T Consensus 215 ~l~~~~~~g~~GiVle~~G~Gn~p~-~~~~~~~~l~~a~~~--i~VV~~Sq 262 (328)
T 1wls_A 215 IVREALRLGYKGIILEGYGVGGIPY-RGTDLFEVVSSISKR--IPVVLTTQ 262 (328)
T ss_dssp HHHHHHHTTCSEEEEEESSSCCCCC-SSSSHHHHHHHHTTT--SCEEEEES
T ss_pred HHHHHHhCCCCEEEEeeeCCCCCCC-CcHHHHHHHHHHhcC--CeEEEecC
Confidence 3444444333799999999987521 015566666666543 55555543
No 300
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=21.04 E-value=96 Score=22.25 Aligned_cols=34 Identities=9% Similarity=-0.132 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+++.|.+.++++++....
T Consensus 26 ~k~vlITGas~gI--------G~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 26 TPVVLVTGGSRGI--------GAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp SCEEEETTTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchH--------HHHHHHHHHHCCCEEEEEcCC
Confidence 5789998888754 556777778889988776443
No 301
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.04 E-value=1.2e+02 Score=21.81 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.||.+. -..+.+.|.+.+++++.....
T Consensus 21 ~k~~lVTGas~gI--------G~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGSRGL--------GFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999888753 556777777789887776554
No 302
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=21.04 E-value=24 Score=26.17 Aligned_cols=106 Identities=6% Similarity=0.040 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHhhCCCcEE-EEecCCCCccccccCCCCCEEEeec-CC-chhhhcCCCccEEEecCChhhHHHHHHcC
Q psy16939 48 LSEETKLGFLEVFKQLKLPIF-WKIDITNDPVLNAKTLPDNVFIQKW-YP-QTDILAHPNLRLFITHGGISSLMEASSLG 124 (174)
Q Consensus 48 ~~~~~~~~i~~~l~~~~~~~i-~~~~~~~~~~~~~~~~~~nv~~~~~-~p-~~~~l~~~~~~~~I~hgG~~t~~eal~~g 124 (174)
........+...|+..|+.++ .+..+.+.-+... ..+..+.+.++ +| .++-+. -+ ..+-+ .. .
T Consensus 168 D~~~~~~~l~~~L~~~g~~v~~~a~~g~eAl~~~~-~~~~dlvl~D~~MPd~mdG~e--~~---------~~ir~-~~-~ 233 (286)
T 3n0r_A 168 DEPVIAADIEALVRELGHDVTDIAATRGEALEAVT-RRTPGLVLADIQLADGSSGID--AV---------KDILG-RM-D 233 (286)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HCCCSEEEEESCCTTSCCTTT--TT---------HHHHH-HT-T
T ss_pred CCHHHHHHHHHHhhccCceEEEEeCCHHHHHHHHH-hCCCCEEEEcCCCCCCCCHHH--HH---------HHHHh-cC-C
Confidence 356667777777888888887 5544432111111 23456777776 56 343221 11 11111 22 8
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+|++--..+. .....+.|+--.+. +-++.++|...|++++.
T Consensus 234 ~piI~lT~~~~~---~~~~~~~G~~~~l~-KP~~~~~L~~~i~~~l~ 276 (286)
T 3n0r_A 234 VPVIFITAFPER---LLTGERPEPTFLIT-KPFQPETVKAAIGQALF 276 (286)
T ss_dssp CCEEEEESCGGG---GCCSSSCCCSSEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCHHH---HHHHHhCCCcEEEe-CCCCHHHHHHHHHHHHH
Confidence 999999655442 12222456555554 45789999999999885
No 303
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=20.95 E-value=90 Score=22.55 Aligned_cols=40 Identities=10% Similarity=0.016 Sum_probs=29.1
Q ss_pred CeEEEEcCCCcCCCC-----CCHHHHHHHHHHHhhCCCcEE-EEecC
Q psy16939 33 GFVYMSFGSVVDPTK-----LSEETKLGFLEVFKQLKLPIF-WKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~-----~~~~~~~~i~~~l~~~~~~~i-~~~~~ 73 (174)
+++++-+|+...... +..+.++.+++.++. +.+++ +++++
T Consensus 4 k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~-G~~vv~lVhGG 49 (249)
T 3ll5_A 4 TMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSG-IEDLVCVVHGG 49 (249)
T ss_dssp CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHT-CTTEEEEEECC
T ss_pred eEEEEEECccEEecCcccccchHHHHHHHHHHHhc-CCceEEEEECc
Confidence 567888887665321 344689999998887 88888 77776
No 304
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=20.94 E-value=2.4e+02 Score=20.32 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=36.0
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeec-C-C--chhhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKW-Y-P--QTDILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~-~-p--~~~~l~~~~~~~ 107 (174)
+.|+|+.||... -..+++.|.+.+ .++..... ....+ ....++.+... + + ...++ ..+|.
T Consensus 2 ~~vlVTGatG~i--------G~~l~~~L~~~g-~~v~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~--~~~d~ 66 (313)
T 3ehe_A 2 SLIVVTGGAGFI--------GSHVVDKLSESN-EIVVIDNLSSGNEE----FVNEAARLVKADLAADDIKDYL--KGAEE 66 (313)
T ss_dssp -CEEEETTTSHH--------HHHHHHHHTTTS-CEEEECCCSSCCGG----GSCTTEEEECCCTTTSCCHHHH--TTCSE
T ss_pred CEEEEECCCchH--------HHHHHHHHHhCC-CEEEEEcCCCCChh----hcCCCcEEEECcCChHHHHHHh--cCCCE
Confidence 368888887753 455667777777 43333322 22111 22334443332 2 1 23345 57999
Q ss_pred EEecCCh
Q psy16939 108 FITHGGI 114 (174)
Q Consensus 108 ~I~hgG~ 114 (174)
+||-+|.
T Consensus 67 vih~a~~ 73 (313)
T 3ehe_A 67 VWHIAAN 73 (313)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998874
No 305
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=20.93 E-value=2.7e+02 Score=20.93 Aligned_cols=107 Identities=13% Similarity=0.095 Sum_probs=58.9
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
++.+|.+|.++. ...+..+...+ .+++..+.... .++.+ ..+ ++.. |-+..+++..+.+|+++--
T Consensus 7 rvgiiG~G~~g~---------~~~~~~l~~~~~~~l~av~d~~~-~~~~~-~~~-~~~~--~~~~~~ll~~~~vD~V~i~ 72 (358)
T 3gdo_A 7 KVGILGYGLSGS---------VFHGPLLDVLDEYQISKIMTSRT-EEVKR-DFP-DAEV--VHELEEITNDPAIELVIVT 72 (358)
T ss_dssp EEEEECCSHHHH---------HTTHHHHTTCTTEEEEEEECSCH-HHHHH-HCT-TSEE--ESSTHHHHTCTTCCEEEEC
T ss_pred eEEEEccCHHHH---------HHHHHHHhhCCCeEEEEEEcCCH-HHHHh-hCC-CCce--ECCHHHHhcCCCCCEEEEc
Confidence 466777776642 01244555553 45554444322 21111 122 2222 3466788866789998865
Q ss_pred CCh----hhHHHHHHcCCCeEec-ccc--chHH-HHHHHHHHcCceeEec
Q psy16939 112 GGI----SSLMEASSLGVPVLGV-PFF--GDQY-RNMVLLRHRGYALIEP 153 (174)
Q Consensus 112 gG~----~t~~eal~~g~P~i~v-P~~--~dQ~-~na~~l~~~G~g~~l~ 153 (174)
-.. ..+.+++.+|+++++= |+. .++. .-....++.|.-+.+.
T Consensus 73 tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 122 (358)
T 3gdo_A 73 TPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVY 122 (358)
T ss_dssp SCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 543 3477889999999874 753 2333 3344445567666554
No 306
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=20.90 E-value=1.2e+02 Score=21.20 Aligned_cols=33 Identities=9% Similarity=-0.200 Sum_probs=22.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||... -..+++.|.+.+++++.....
T Consensus 2 k~vlVTGas~gI--------G~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 2 SIIVISGCATGI--------GAATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 468888887753 455666677778887776553
No 307
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=20.90 E-value=1.2e+02 Score=21.98 Aligned_cols=75 Identities=8% Similarity=0.049 Sum_probs=42.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEee--cCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQK--WYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~--~~p~~~---~l~---- 101 (174)
.++++|+.||.+. -..+.+.|.+.+++++....... ..+..+ ....++.... ..+... ++.
T Consensus 27 ~k~vlVTGas~GI--------G~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 27 QRVCIVTGGGSGI--------GRATAELFAKNGAYVVVADVNEDAAVRVAN-EIGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHH--------HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4789999988764 56677778888998877665421 111111 1223343332 222111 111
Q ss_pred -CCCccEEEecCChh
Q psy16939 102 -HPNLRLFITHGGIS 115 (174)
Q Consensus 102 -~~~~~~~I~hgG~~ 115 (174)
+...|++|+.+|..
T Consensus 98 ~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 14689999999953
No 308
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=20.81 E-value=1e+02 Score=22.27 Aligned_cols=75 Identities=7% Similarity=-0.045 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Cccccc--cCCCCCEEEeec-C-Cch---hhh---
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNA--KTLPDNVFIQKW-Y-PQT---DIL--- 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~--~~~~~nv~~~~~-~-p~~---~~l--- 100 (174)
.++++|+.|+.+. -..+...|.+.++++++...... ..+..+ .....++..... + +.. .++
T Consensus 33 gk~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 33 GRTALVTGSSRGI--------GAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TCEEEETTCSSHH--------HHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4789999888753 56677788888999887765432 111100 011334443332 2 211 111
Q ss_pred -cCCCccEEEecCCh
Q psy16939 101 -AHPNLRLFITHGGI 114 (174)
Q Consensus 101 -~~~~~~~~I~hgG~ 114 (174)
.....|++|+.+|.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 11368999999985
No 309
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=20.67 E-value=1.2e+02 Score=21.38 Aligned_cols=34 Identities=9% Similarity=-0.067 Sum_probs=25.2
Q ss_pred CCeEEEEcCC--CcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGS--VVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs--~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.+.|+|+.|+ .+. -..+.+.|.+.++++++....
T Consensus 14 ~k~vlITGa~~~~gi--------G~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 14 GKRILLTGLLSNRSI--------AYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TCEEEECCCCSTTSH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCCCcH--------HHHHHHHHHHcCCCEEEEecc
Confidence 5889999987 432 456777778889988877654
No 310
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=20.67 E-value=1.3e+02 Score=21.97 Aligned_cols=34 Identities=15% Similarity=-0.102 Sum_probs=25.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.|+.+. -..+.+.|.+.++++++....
T Consensus 47 gk~vlVTGas~GI--------G~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 47 GKNVLITGGDSGI--------GRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TCEEEEETTTSHH--------HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988754 556777888889988877654
No 311
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.61 E-value=84 Score=22.21 Aligned_cols=33 Identities=6% Similarity=-0.054 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID 72 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 72 (174)
.+.|+|+.|+.+. -..+.+.|.+.+++++...+
T Consensus 13 ~k~vlITGas~gi--------G~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 13 QRIAYVTGGMGGI--------GTSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp CEEEEETTTTSHH--------HHHHHHHHHHTTEEEEEEEC
T ss_pred CCEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeC
Confidence 5889999888754 45677777788988877663
No 312
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=20.52 E-value=2.7e+02 Score=20.72 Aligned_cols=61 Identities=11% Similarity=0.167 Sum_probs=40.1
Q ss_pred cCCchhhhcCCCccEEEecCChh----hHHHHHHcCCCeEec-cccc---hHHHHHHHHHHcCceeEec
Q psy16939 93 WYPQTDILAHPNLRLFITHGGIS----SLMEASSLGVPVLGV-PFFG---DQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~----t~~eal~~g~P~i~v-P~~~---dQ~~na~~l~~~G~g~~l~ 153 (174)
|-+..+++..+.+|+++.---.. .+.+++.+|+++++= |... +-..-....++.|.-+.+.
T Consensus 53 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 53 YKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred eCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 45667788666899999766544 367789999998865 7532 3333444555667766654
No 313
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=20.48 E-value=2.8e+02 Score=20.89 Aligned_cols=106 Identities=13% Similarity=0.141 Sum_probs=59.2
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCc-cccccCCCCCEEEeecCCchhhhcCCCccEEEe
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDP-VLNAKTLPDNVFIQKWYPQTDILAHPNLRLFIT 110 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~ 110 (174)
++.+|.+|.++. ..+.++...+ .+++..+....-. +..+ . .++ ..|-+..+++..+.+|+++-
T Consensus 7 ~vgiiG~G~~g~----------~~~~~l~~~~~~~l~av~d~~~~~~~~a~-~--~g~--~~~~~~~~ll~~~~~D~V~i 71 (359)
T 3e18_A 7 QLVIVGYGGMGS----------YHVTLASAADNLEVHGVFDILAEKREAAA-Q--KGL--KIYESYEAVLADEKVDAVLI 71 (359)
T ss_dssp EEEEECCSHHHH----------HHHHHHHTSTTEEEEEEECSSHHHHHHHH-T--TTC--CBCSCHHHHHHCTTCCEEEE
T ss_pred cEEEECcCHHHH----------HHHHHHHhCCCcEEEEEEcCCHHHHHHHH-h--cCC--ceeCCHHHHhcCCCCCEEEE
Confidence 467777776632 2345555554 4555444432110 1111 1 122 23456778887678999987
Q ss_pred cCChhh----HHHHHHcCCCeEec-cccc--hHH-HHHHHHHHcCceeEec
Q psy16939 111 HGGISS----LMEASSLGVPVLGV-PFFG--DQY-RNMVLLRHRGYALIEP 153 (174)
Q Consensus 111 hgG~~t----~~eal~~g~P~i~v-P~~~--dQ~-~na~~l~~~G~g~~l~ 153 (174)
---..+ +.+++.+|+++++= |+.. ++. .-....++.|.-+.+.
T Consensus 72 ~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (359)
T 3e18_A 72 ATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVH 122 (359)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 665443 67889999998874 7532 333 3334445567766553
No 314
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=20.47 E-value=2.1e+02 Score=22.29 Aligned_cols=97 Identities=13% Similarity=0.315 Sum_probs=47.3
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe------ecCCchhhhc---CCCccEEEecCCh----hhHHH
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ------KWYPQTDILA---HPNLRLFITHGGI----SSLME 119 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~------~~~p~~~~l~---~~~~~~~I~hgG~----~t~~e 119 (174)
...++.++.+.|++++............. ...+..... +|.+...++. ...+|+++.-.|. ..+.+
T Consensus 14 ~~~~~~a~~~~G~~vv~v~~~~~~~~~~~-~~ad~~~~~~p~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~ 92 (451)
T 1ulz_A 14 AVRIIRACKELGIPTVAIYNEVESTARHV-KLADEAYMIGTDPLDTYLNKQRIINLALEVGADAIHPGYGFLAENAEFAK 92 (451)
T ss_dssp HHHHHHHHHHHTCCEEEEECGGGTTCHHH-HHSSEEEECCSSTTHHHHCHHHHHHHHHHTTCCEEECCSSTTTTCHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEechhhcccchh-hhCcEEEEcCCCcccccCCHHHHHHHHHHcCCCEEEECCCccccCHHHHH
Confidence 45678888888998887654322110000 122333333 3333333332 1457887764332 22333
Q ss_pred HH-HcCCCeEeccc-----cchHHHHHHHHHHcCcee
Q psy16939 120 AS-SLGVPVLGVPF-----FGDQYRNMVLLRHRGYAL 150 (174)
Q Consensus 120 al-~~g~P~i~vP~-----~~dQ~~na~~l~~~G~g~ 150 (174)
.+ ..|+|.+.-+. ..|-..--..+++.|+-.
T Consensus 93 ~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~ 129 (451)
T 1ulz_A 93 MCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPV 129 (451)
T ss_dssp HHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCB
T ss_pred HHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCC
Confidence 33 46888765432 234444445556666543
No 315
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.38 E-value=1.3e+02 Score=21.24 Aligned_cols=33 Identities=9% Similarity=-0.259 Sum_probs=24.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
++++|+.||.+. -..+.+.|.+.+.+++.....
T Consensus 3 k~vlVTGas~gI--------G~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGHGI--------GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 678999988754 556777777889988776554
No 316
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=20.38 E-value=2.1e+02 Score=19.42 Aligned_cols=106 Identities=10% Similarity=0.069 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHH--cCC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASS--LGV 125 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~--~g~ 125 (174)
.......+...|...++.+.......+..+... .....+.+.+. +|... |. .+.+.+. ..+
T Consensus 13 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~-~~~~dlvllD~~l~~~~--------------g~-~~~~~l~~~~~~ 76 (230)
T 2oqr_A 13 EESLADPLAFLLRKEGFEATVVTDGPAALAEFD-RAGADIVLLDLMLPGMS--------------GT-DVCKQLRARSSV 76 (230)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHH-HHCCSEEEEESSCSSSC--------------HH-HHHHHHHHHCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHh-ccCCCEEEEECCCCCCC--------------HH-HHHHHHHcCCCC
Confidence 344566666677777777654332222111001 12345555554 23211 11 2233332 478
Q ss_pred CeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 126 PVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 126 P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|++++-...+.. .....-+.|+--.+. +.++.++|..+++.++..
T Consensus 77 ~ii~lt~~~~~~-~~~~~~~~ga~~~l~-Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 77 PVIMVTARDSEI-DKVVGLELGADDYVT-KPYSARELIARIRAVLRR 121 (230)
T ss_dssp SEEEEECCHHHH-HHHHHHHHCCSCCCC-SSCCHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCcHH-HHHHHHHcCCCEEEe-CCCCHHHHHHHHHHHHhh
Confidence 888885544433 334444566655553 456889999999988754
No 317
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=20.35 E-value=2e+02 Score=22.95 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=47.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC-CCCccccccCCCCCEEEeecCCchhhhcCCCc-cEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI-TNDPVLNAKTLPDNVFIQKWYPQTDILAHPNL-RLFI 109 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~-~~~I 109 (174)
.+.|.|-+||.. ....+++....|+..+.++-+.+-+ .+.++ .. ..+. .-.....+ +++|
T Consensus 265 ~~~V~Ii~gs~S-----D~~~~~~a~~~l~~~gi~~~v~V~saHR~p~----~~------~~~~---~~~~~~g~~~viI 326 (425)
T 2h31_A 265 QCRVVVLMGSTS-----DLGHCEKIKKACGNFGIPCELRVTSAHKGPD----ET------LRIK---AEYEGDGIPTVFV 326 (425)
T ss_dssp CCEEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTCHH----HH------HHHH---HHHHTTCCCEEEE
T ss_pred CCeEEEEecCcc-----cHHHHHHHHHHHHHcCCceEEeeeeccCCHH----HH------HHHH---HHHHHCCCCeEEE
Confidence 466777777774 5778999999999998865444333 33331 00 0000 00111235 5777
Q ss_pred ecCChh----hHHHHHHcCCCeEecccc
Q psy16939 110 THGGIS----SLMEASSLGVPVLGVPFF 133 (174)
Q Consensus 110 ~hgG~~----t~~eal~~g~P~i~vP~~ 133 (174)
.-+|.. ++..++ .-+|+|.+|..
T Consensus 327 a~AG~~a~Lpgvva~~-t~~PVIgvP~~ 353 (425)
T 2h31_A 327 AVAGRSNGLGPVMSGN-TAYPVISCPPL 353 (425)
T ss_dssp EECCSSCCHHHHHHHH-CSSCEEECCCC
T ss_pred EEcCcccchHhHHhcc-CCCCEEEeeCc
Confidence 777752 333333 57899999863
No 318
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=20.33 E-value=1.4e+02 Score=20.18 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL 65 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~ 65 (174)
+.|+++||-.. .+...++..++.|++.+.
T Consensus 2 iAyi~lGSNlG---d~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchh---hHHHHHHHHHHHHHcCCC
Confidence 57999999864 356778888888877643
No 319
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.31 E-value=1.3e+02 Score=21.43 Aligned_cols=36 Identities=11% Similarity=0.042 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++||.++... ..-..+...|.+.|.++++....
T Consensus 6 gK~alVTGaa~~~------GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIMGIANKR------SIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEECCCSTT------CHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCCc------hHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999865421 13567888889999998887765
No 320
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=20.31 E-value=1.3e+02 Score=21.85 Aligned_cols=74 Identities=12% Similarity=0.025 Sum_probs=42.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEEee--cCCchh---hhc----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFIQK--WYPQTD---ILA---- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~~~--~~p~~~---~l~---- 101 (174)
.++++|+.||.+. -..+.+.|.+.++++++...... ..++.. ....++.... ..+... ++.
T Consensus 5 gk~~lVTGas~GI--------G~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 5 GEVALITGGASGL--------GRALVDRFVAEGARVAVLDKSAERLRELEV-AHGGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp TCEEEEETCSSHH--------HHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHH--------HHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-HcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3789999988754 56677788888998887665421 111111 2233444333 222211 110
Q ss_pred -CCCccEEEecCCh
Q psy16939 102 -HPNLRLFITHGGI 114 (174)
Q Consensus 102 -~~~~~~~I~hgG~ 114 (174)
+...|++|+.+|.
T Consensus 76 ~~g~iD~lvnnAg~ 89 (281)
T 3zv4_A 76 AFGKIDTLIPNAGI 89 (281)
T ss_dssp HHSCCCEEECCCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1468999999986
No 321
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.29 E-value=1.3e+02 Score=21.42 Aligned_cols=34 Identities=9% Similarity=-0.104 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDI 73 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 73 (174)
.++++|+.||.+. -..+.+.|.+.+++++.....
T Consensus 8 gk~~lVTGas~gI--------G~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHGM--------GLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSHH--------HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHH--------HHHHHHHHHHCCCEEEEEeCC
Confidence 4789999988754 556777778889988776654
No 322
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.26 E-value=1.4e+02 Score=20.24 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=22.9
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL 65 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~ 65 (174)
.+|+++||-.. .+...++..++.|++.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLN---TPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccch---HHHHHHHHHHHHHhhCCC
Confidence 58999999875 467788888888888653
No 323
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=20.14 E-value=2.6e+02 Score=20.44 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=37.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC--CcEEEEecCCC---CccccccCCCCCEEEeec-C-Cch---hhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK--LPIFWKIDITN---DPVLNAKTLPDNVFIQKW-Y-PQT---DILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~---~~~~~~~~~~~nv~~~~~-~-p~~---~~l~ 101 (174)
...|+|+.||... -..+++.|.+.+ ++++....... ...+.......++.+... + +.. .++.
T Consensus 24 ~~~vlVtGatG~i--------G~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 24 AMNILVTGGAGFI--------GSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK 95 (346)
T ss_dssp CEEEEEETTTSHH--------HHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCeEEEECCccHH--------HHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHh
Confidence 3679999888753 344555555556 45555443321 111111011235544432 2 222 2231
Q ss_pred CCCccEEEecCChh
Q psy16939 102 HPNLRLFITHGGIS 115 (174)
Q Consensus 102 ~~~~~~~I~hgG~~ 115 (174)
...+|++||-+|..
T Consensus 96 ~~~~d~Vih~A~~~ 109 (346)
T 4egb_A 96 ERDVQVIVNFAAES 109 (346)
T ss_dssp HHTCCEEEECCCCC
T ss_pred hcCCCEEEECCccc
Confidence 12389999998843
No 324
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=20.00 E-value=1.1e+02 Score=21.76 Aligned_cols=76 Identities=11% Similarity=-0.041 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC--Cccccc--cCCCCCEEEeec--CCchh---hhc-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN--DPVLNA--KTLPDNVFIQKW--YPQTD---ILA- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~--~~~~~~--~~~~~nv~~~~~--~p~~~---~l~- 101 (174)
.++++|+.|+.+. -..+++.|.+.++++++...... ..+..+ .....++.+... .+... ++.
T Consensus 26 ~k~vlVTGas~gI--------G~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 26 SRSVLVTGASKGI--------GRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp CCEEEETTTTSHH--------HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCChH--------HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4789999888754 45677777888998876554321 110000 012234444432 22221 111
Q ss_pred ----CCCccEEEecCChh
Q psy16939 102 ----HPNLRLFITHGGIS 115 (174)
Q Consensus 102 ----~~~~~~~I~hgG~~ 115 (174)
+...|.+|+.+|..
T Consensus 98 ~~~~~g~id~li~nAg~~ 115 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIA 115 (267)
T ss_dssp HHHHHCCCSEEEECCCCC
T ss_pred HHHHhCCccEEEECCCCC
Confidence 14789999999853
Done!