BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1694
(247 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|443708149|gb|ELU03404.1| hypothetical protein CAPTEDRAFT_168452 [Capitella teleta]
Length = 348
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 129/222 (58%), Gaps = 14/222 (6%)
Query: 21 ITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHV 80
IT +++ I I+ A F I SKFL E+C D +++ + + L+ L +
Sbjct: 35 ITTGVASITAIGISTLAANFGS--IKSKFL------ESCDDNWLKK-DTQGLKNDLSTRL 85
Query: 81 HGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGT 140
HGQ L I ++ A++ H R+ +KAL +S HG G GKNYV FI + Y
Sbjct: 86 HGQHLVIENVVKAIQAH--KRHLPSKALVMSFHGWTGCGKNYVGRFIAEHL---YHQGMK 140
Query: 141 SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIP 200
S+FVH F + HFP+ + + Y+ Q+ +WI N+TAC +++FIFDEVDK P GLLD+I+P
Sbjct: 141 SKFVHLFVATHHFPHASRIETYKDQVRDWIKGNITACPQSMFIFDEVDKMPPGLLDIILP 200
Query: 201 FIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
FIDHH N + ++++IFLFLSN+GG I E G +
Sbjct: 201 FIDHHEEINGVDYRHSIFLFLSNTGGNLINRKTHEYWSQGRK 242
>gi|91076772|ref|XP_973777.1| PREDICTED: similar to Torsin family protein [Tribolium castaneum]
gi|270001920|gb|EEZ98367.1| hypothetical protein TcasGA2_TC000824 [Tribolium castaneum]
Length = 341
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 115/183 (62%), Gaps = 4/183 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C++ I + + LE+ LK+H++GQ L + + AL++H+ + + KAL +S HG P
Sbjct: 46 ECCSEHSIHA-DFDGLEDALKKHIYGQHLVLDIVTNALRSHWADNHKPQKALTLSFHGWP 104
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
G+GKNYVT FIV +++K Y K S+FVH F R+HF +EN V Y+ L WI N T
Sbjct: 105 GSGKNYVTKFIVENMYK-YGSK--SKFVHHFIGRMHFSSENKVKEYQENLQEWIKGNTTN 161
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C + +FIFDEVDK P +L++I P ID+ + + +++ +F+FLSN+G I LE+
Sbjct: 162 CGKQLFIFDEVDKMPSRVLNIIKPMIDYRDDVDGVDYRDCVFIFLSNTGADLINEHVLEM 221
Query: 237 RKS 239
K
Sbjct: 222 WKE 224
>gi|348570402|ref|XP_003470986.1| PREDICTED: torsin-1A-like [Cavia porcellus]
Length = 332
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C + +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQR--RSLSREALQKDLDNRLFGQHLAKKVILNAVTGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+
Sbjct: 105 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK P GL+D I PF+D++ V +++S+Q IF+FLSN+G IM+ L+
Sbjct: 162 ACARSIFIFDEMDKMPAGLIDAIKPFLDYYDVVDEVSYQRAIFIFLSNAGAERIMDVALD 221
Query: 236 LRKSGE 241
+SG
Sbjct: 222 FWRSGR 227
>gi|126297832|ref|XP_001369279.1| PREDICTED: torsin-1B-like [Monodelphis domestica]
Length = 338
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 30 GIAIAAG---IAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI A YFS + +F+ E C ++ Q N L+ L++ + GQ LA
Sbjct: 33 GIAIGAASVLTGYFSYPDLYCRFV------ECCREE--QPLNASALKLDLEEKLFGQHLA 84
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
I AL F+N + K L +SLHG GTGKN+V+ + ++ + + S FVH
Sbjct: 85 REVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAKNL---HPEGLKSNFVHL 140
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
F S +HFP+E + LY+ QL WI NV++C R++FIFDE+DK +GL+D I PF+D++
Sbjct: 141 FVSTLHFPHEQKIKLYQEQLQKWIRGNVSSCARSVFIFDEMDKLHRGLIDAIKPFLDYYE 200
Query: 207 VYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ IS++ IF+FLSN+GG I L+ K+G++ I
Sbjct: 201 QVDGISYRKAIFIFLSNAGGDLITRMALDFWKAGKKREDIQ 241
>gi|194033707|ref|XP_001929298.1| PREDICTED: torsin-1B-like [Sus scrofa]
Length = 336
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 126/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAG---IAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI Y S + + +F E C ++ Q N + +L++ + GQ LA
Sbjct: 31 GIAIGTASVLTGYLSYTELFCRF------AECCREE--QPLNASAFKLELEERLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
+ AL F+N + KAL +SLHG GTGKN+V+ + ++ + KG S FVH
Sbjct: 83 TEVLLKALTG-FRNNKNPKKALTLSLHGWAGTGKNFVSQIVAENLHR----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E HV LY+ QL WI NV+AC ++FIFDE+DK GL+D I PF+D++
Sbjct: 138 LFVSTLHFPHEQHVKLYQDQLQRWIRGNVSACANSVFIFDEMDKLHPGLIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G R I
Sbjct: 198 EQIDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRRREDIQ 239
>gi|324518625|gb|ADY47157.1| Torsin-1B [Ascaris suum]
Length = 296
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L ++Q ++GQ LA + AL++HF N + KAL IS HG G GKNY+T I ++
Sbjct: 6 LRRTMRQRLYGQHLAQETVLPALQSHFNNE-NPKKALVISFHGWTGCGKNYLTSMIAENM 64
Query: 132 FKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
FK KG S +VH F S +HF N N ++ Y+ L WI NV+ C+R++FIFDEVDK
Sbjct: 65 FK----KGMKSEYVHLFISTLHFANPNEIATYQQNLREWIHGNVSLCERSLFIFDEVDKM 120
Query: 191 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
P ++D I PFIDH+ + ++ +IF+FLSNSGG EI L ++G+
Sbjct: 121 PPKVMDAIKPFIDHYDNLEGVDYRKSIFIFLSNSGGNEITEKTLRHYQAGK 171
>gi|410979366|ref|XP_003996056.1| PREDICTED: torsin-1B [Felis catus]
Length = 327
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 127/222 (57%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIA+ A A Y S + + +F E C ++ Q N L+ +L++ + GQ LA
Sbjct: 22 GIALGAASALTGYLSYTDLYCRF------AECCREE--QRLNASALKLELEEKLFGQHLA 73
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 74 TEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL----HSKGLKSNFVH 128
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E H+ LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 129 LFVSTLHFPHEQHIKLYQDQLQGWIRGNVSACASSVFIFDEMDKLHPGVIDAIKPFLDYY 188
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 189 EQVDGVSYRKAIFMFLSNAGGDLITKTALDFWRAGRKREDIQ 230
>gi|344271670|ref|XP_003407660.1| PREDICTED: torsin-1B-like [Loxodonta africana]
Length = 336
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 138/252 (54%), Gaps = 18/252 (7%)
Query: 1 MHISLLYQHLIIYSIICISGITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGG 56
M ++ + + ++ + + F +S GIAI A A Y S + +F
Sbjct: 1 MQLAGRLAGVAVLRLLLAAQVVSAFEPISVGIAIGAASALTGYLSYTDFYCRF------A 54
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C + Q N L+ L++ + GQ LA I AL F+N + KAL +SLHG
Sbjct: 55 ECCRAE--QPLNASALKLDLEEKLFGQHLATEVILKALIG-FKNNKNPKKALTLSLHGWA 111
Query: 117 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ + +++ KG S FVH F S +HFP+E + LY+ QL NWI NV+
Sbjct: 112 GTGKNFVSQIVAENLYS----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQNWIRGNVS 167
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC ++FIFDE+DK GL+D I PF+D++ + +S++ IF+FLSN+GG I L+
Sbjct: 168 ACAGSVFIFDEMDKLHPGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKMALD 227
Query: 236 LRKSGERYITIH 247
++G++ I
Sbjct: 228 FWRAGKKREDIQ 239
>gi|348524336|ref|XP_003449679.1| PREDICTED: torsin-1B-like [Oreochromis niloticus]
Length = 337
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 134/233 (57%), Gaps = 9/233 (3%)
Query: 10 LIIYSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGG-GEACTDKFIQSSN 68
L+++ ++C SG T +S IA G+A I+ +++ N F E C ++I S N
Sbjct: 9 LLLWMLVC-SGTTQAIEPIS-TTIAVGMAAALTGIL-ARYQNIFYYFHECCRPEWI-SFN 64
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 128
L L + GQ +A I A+ N + K L +SLHG GTGKN+V+ I
Sbjct: 65 KTGLRNDLDTKLFGQHIASRIILKAVSGFMSNE-NPKKPLVLSLHGWTGTGKNFVSKLIA 123
Query: 129 SSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
+I+K D S FVH F S +HFP+++ + Y+ QL WI NVT C+R++FIFDE+D
Sbjct: 124 ENIYKEGMD---SSFVHVFTSTLHFPHQSQKATYKSQLQQWIKGNVTNCERSMFIFDEMD 180
Query: 189 KFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
K GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+ K G
Sbjct: 181 KMHPGLIDSIKPYLDYYDKLDGVSYRKSIFIFLSNAGGESIIQTVLDFWKQGR 233
>gi|359320466|ref|XP_003639349.1| PREDICTED: torsin-1B-like [Canis lupus familiaris]
Length = 336
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 126/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAIAA A Y S + + +F E C ++ Q N L+ +L++ + GQ LA
Sbjct: 31 GIAIAAASALTGYLSYTDLFCRF------AECCLEE--QRLNASALKLELEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL----HSKGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQQIKLYQDQLQAWIRGNVSACASSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +SF+ IF+FLSN+GG I L+ ++G + I
Sbjct: 198 EQVDGVSFRKAIFIFLSNAGGDLITKIALDFWRAGRKREDIQ 239
>gi|296191000|ref|XP_002743421.1| PREDICTED: torsin-1B [Callithrix jacchus]
Length = 336
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 135/241 (56%), Gaps = 18/241 (7%)
Query: 12 IYSIICISGITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSS 67
+ +++ + + F ++ GIAI A A Y + + I +F E C ++ +
Sbjct: 12 VLALLLATRVVAAFEPITVGIAIGAASAITGYLTYNDIYCRF------AECCREE--RPL 63
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ +
Sbjct: 64 NASALKLDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIV 122
Query: 128 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
++ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDE 178
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITI 246
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDI 238
Query: 247 H 247
H
Sbjct: 239 H 239
>gi|427794909|gb|JAA62906.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 364
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 12/239 (5%)
Query: 8 QHLIIYSIICISGITG------EFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTD 61
+ ++ S++CI G E T+S AIAAG A + E C
Sbjct: 22 EPVVCVSLVCIWLSLGWQCEGLEPVTVS-TAIAAGAALGVSVMYAGWNALKCKSSECCAA 80
Query: 62 KFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKN 121
++ + NV+ L+ LK +HGQ L I ALK+HFQN KAL +S HG G GKN
Sbjct: 81 PWV-TDNVKGLDNMLKFRLHGQPLVHRAIVRALKDHFQNPAPK-KALVLSFHGWTGGGKN 138
Query: 122 YVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
Y + I ++ YK+ S++V + S HFP+++ V YR L I + V C R++
Sbjct: 139 YASSMIAEAL---YKEGMNSKYVSLYVSTKHFPHQDEVPKYRKTLQKEIEAKVKECGRSL 195
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
FIFDE+DK P GL+D+I P++D H +++ ++ +IF+FLSN+ G I L+ K G
Sbjct: 196 FIFDEIDKMPNGLIDIIKPYLDFHEKLDEVDYRKSIFIFLSNTAGDVIARATLDAWKDG 254
>gi|297480795|ref|XP_002691721.1| PREDICTED: torsin-1B [Bos taurus]
gi|296482155|tpg|DAA24270.1| TPA: torsin family 1, member B (torsin B)-like [Bos taurus]
Length = 309
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 6/191 (3%)
Query: 58 ACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPG 117
+C K R L++ L++ + GQ LA I AL F+N + K L +SLHG G
Sbjct: 27 SCDPKGCALPRSRALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAG 85
Query: 118 TGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
TGKN+V+ + ++ KG S FVH F S +HFP+E H+ LY+ QL WI NV+A
Sbjct: 86 TGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQHIKLYQDQLQRWIRGNVSA 141
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 142 CAGSVFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDF 201
Query: 237 RKSGERYITIH 247
++G + I
Sbjct: 202 WRAGRKREDIQ 212
>gi|338720334|ref|XP_001499689.2| PREDICTED: torsin-1B-like [Equus caballus]
Length = 343
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 18/236 (7%)
Query: 12 IYSIICISGITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSS 67
+ ++ ++ + F +S G+ I A A Y S + + +F E C ++ Q
Sbjct: 12 VLRLLLVAHVAAAFDPVSVGLVIGAASALTGYLSYTDLYCRF------AECCREE--QPL 63
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ +
Sbjct: 64 NASALKLDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIV 122
Query: 128 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
++ KG S+FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENL----HSKGLKSKFVHLFVSTLHFPHEQQIKLYQDQLQKWIRGNVSACASSLFIFDE 178
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G +
Sbjct: 179 MDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRK 234
>gi|301758844|ref|XP_002915283.1| PREDICTED: torsin-1B-like [Ailuropoda melanoleuca]
Length = 357
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI A A Y S + + +F E C +K Q N L+ +L++ + GQ LA
Sbjct: 52 GIAIGAATALTGYLSYTDLYCRF------AECCREK--QPLNASALKLELEEKLFGQHLA 103
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + + KG S FVH
Sbjct: 104 TEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEHLHS----KGLRSNFVH 158
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 159 LFVSTLHFPHEQQIKLYQDQLQGWIRGNVSACASSVFIFDEMDKLHPGVIDAIKPFLDYY 218
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I L+ ++G + I
Sbjct: 219 EQVDGVSYRKAIFIFLSNAGGDLITKIALDFWRAGRKREDIQ 260
>gi|312069589|ref|XP_003137752.1| hypothetical protein LOAG_02166 [Loa loa]
gi|307767077|gb|EFO26311.1| hypothetical protein LOAG_02166 [Loa loa]
Length = 354
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 18/237 (7%)
Query: 11 IIYSIICISG---ITGEFFTL---SGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFI 64
II ++C+ + GE +L +G AIAA ++ FS F C D +
Sbjct: 7 IILLLLCLHTKDLVCGEPLSLLVGAGSAIAASLSIFSYYARCKLF--------ECCDSYW 58
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVT 124
+ L+ L+ ++GQ LA I A+ H++N + KAL +S HG G GKNY++
Sbjct: 59 VREDYTGLQHSLRTRLYGQHLAKETIITAVIAHWKNP-NPKKALVMSFHGWTGCGKNYLS 117
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
I ++ Y+ S +VH + S +HF N + LY++QL +WI NV+ C+R++F+F
Sbjct: 118 SIITENL---YRKGMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSKCERSLFVF 174
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
DEVDK P ++D + PFIDH+ + F+ +IF+FLSNSG EI L+ + G+
Sbjct: 175 DEVDKMPAKVIDAVKPFIDHYEYLEGVDFRKSIFIFLSNSGSNEITQKALQHYEDGK 231
>gi|170576026|ref|XP_001893475.1| Torsin family protein [Brugia malayi]
gi|158600510|gb|EDP37690.1| Torsin family protein [Brugia malayi]
Length = 354
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 15/224 (6%)
Query: 21 ITGEFFTL---SGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLK 77
I GE +L +G AIAA ++ FS K L E C +I+ + + L+ +
Sbjct: 20 IYGEPLSLLIGAGSAIAASLSIFS-YYARCKLL------ECCDSSWIRG-DYKGLQHSMH 71
Query: 78 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKD 137
++GQ LA I A H++N KAL +S HG G GKNY++ I+ ++ YK
Sbjct: 72 TRLYGQHLAKETIITAAIAHWKNP-SPKKALVMSFHGWTGCGKNYLSSMIIENL---YKK 127
Query: 138 KGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDV 197
S +VH + S +HF N + LY++QL +WI NV+ C+R++F+FDEVDK P ++D
Sbjct: 128 GMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSKCERSLFVFDEVDKMPAKVIDA 187
Query: 198 IIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
I PFIDH+ + F+ +IF+FLSNSG EI L+ + G+
Sbjct: 188 IKPFIDHYEYLEDVDFRKSIFIFLSNSGSNEIAQKALQHYEDGK 231
>gi|332230221|ref|XP_003264285.1| PREDICTED: LOW QUALITY PROTEIN: torsin-1B [Nomascus leucogenys]
Length = 336
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI SNV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRSNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>gi|85861170|ref|NP_001034286.1| torsin-1B precursor [Rattus norvegicus]
gi|85056989|gb|AAI11705.1| Torsin family 1, member B [Rattus norvegicus]
gi|149039067|gb|EDL93287.1| rCG45853 [Rattus norvegicus]
Length = 336
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 14/212 (6%)
Query: 32 AIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHIC 91
A++A Y S S +F E C ++ + N L+ L++ + GQ LA I
Sbjct: 36 AVSALTGYLSYSDFYCRFT------ECCHEE--RPLNTSALKLDLEEKLFGQHLATEVIL 87
Query: 92 GALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSR 150
AL F+N + K L +SLHG GTGKN+V+ + +++ KG S FVH F S
Sbjct: 88 KALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLYP----KGLKSNFVHLFVST 142
Query: 151 IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ 210
+HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++ +
Sbjct: 143 LHFPHEQKIKLYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDG 202
Query: 211 ISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
IS++ IF+FLSN+GG I T L+ ++G +
Sbjct: 203 ISYRKAIFIFLSNAGGDLITKTTLDFWRAGRK 234
>gi|291244635|ref|XP_002742201.1| PREDICTED: torsin family 1, member B (torsin B)-like [Saccoglossus
kowalevskii]
Length = 370
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 10 LIIYSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNV 69
L+++S+I + E FT +G++ + + + F E CT+K+I +N+
Sbjct: 23 LLVFSVIL--QVNSEPFT-AGLSAFGAAGLAAFYTVADRLWCNFK--ECCTEKYI-PANI 76
Query: 70 RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVS 129
L L+Q V+GQ L + + ++ H N + TK+L +S HG G GKN+V+ I
Sbjct: 77 TSLSMDLQQKVYGQHLVQTVVLNTIQGHVTNP-NPTKSLVLSFHGWTGGGKNFVSRIIAD 135
Query: 130 SIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+I+ D S++VH F + +HFP++ + Y+ QL +WI NVT C R +FIFDE+DK
Sbjct: 136 NIYMNGMD---SKYVHLFVATLHFPHKKDIDHYKDQLISWIKGNVTQCQRQLFIFDEMDK 192
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
GL+DV+ PF+DH+ + + ++ IF+FLSN+ G +I LE K G
Sbjct: 193 MHPGLIDVLKPFLDHYPEIDGVDYRKNIFIFLSNTAGNDITVKTLENWKQG 243
>gi|395844401|ref|XP_003794950.1| PREDICTED: torsin-1B [Otolemur garnettii]
Length = 338
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 122/217 (56%), Gaps = 14/217 (6%)
Query: 32 AIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHIC 91
A++A Y S + +F E C ++ Q N L+ L++ + GQ +A I
Sbjct: 38 AVSALTGYLSYKDVYCRF------AECCREE--QPLNASALKLDLEEKLFGQHVATEVIL 89
Query: 92 GALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSR 150
AL F+N K L +SLHG GTGKN+V+ + ++ + KG S FVH F S
Sbjct: 90 KALTG-FRNNKSPKKPLTLSLHGWAGTGKNFVSQIVAENLHR----KGLKSNFVHLFVST 144
Query: 151 IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ 210
+HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++ +
Sbjct: 145 LHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDG 204
Query: 211 ISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 205 VSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 241
>gi|354503908|ref|XP_003514022.1| PREDICTED: torsin-1A [Cricetulus griseus]
gi|344258465|gb|EGW14569.1| Torsin-1A [Cricetulus griseus]
Length = 333
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
KSG++
Sbjct: 222 FWKSGKQ 228
>gi|402896316|ref|XP_003911249.1| PREDICTED: torsin-1B [Papio anubis]
Length = 336
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>gi|383873079|ref|NP_001244677.1| torsin-1B precursor [Macaca mulatta]
gi|380787241|gb|AFE65496.1| torsin-1B precursor [Macaca mulatta]
gi|380787243|gb|AFE65497.1| torsin-1B precursor [Macaca mulatta]
gi|383414791|gb|AFH30609.1| torsin-1B precursor [Macaca mulatta]
gi|384946502|gb|AFI36856.1| torsin-1B precursor [Macaca mulatta]
Length = 336
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>gi|417399144|gb|JAA46602.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 335
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 122/218 (55%), Gaps = 10/218 (4%)
Query: 26 FTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQEL 85
F +A+A G+A + + F E C ++ + N L+ QL++ + GQ L
Sbjct: 25 FEPISVALAIGVASIYVAYRHPALYCRFA--ECCGEE--KPLNASALKLQLEEKLFGQHL 80
Query: 86 AISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFV 144
A I AL F+N K L +SLHG GTGKN+V+ + ++ KG S FV
Sbjct: 81 ATEVILKALTG-FKNNKEPKKPLTLSLHGWAGTGKNFVSQIVAENLHA----KGLKSNFV 135
Query: 145 HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH 204
H F S +HFP+E+ LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D+
Sbjct: 136 HLFVSTLHFPHEHQTKLYQDQLQEWIRGNVSACASSVFIFDEMDKLHPGIIDAIKPFLDY 195
Query: 205 HAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+ +S++ IF+FLSN+GG I T LE ++G +
Sbjct: 196 YEQVGGVSYRKAIFIFLSNAGGDLITETALEFWRAGRK 233
>gi|432884755|ref|XP_004074572.1| PREDICTED: torsin-1B-like isoform 2 [Oryzias latipes]
Length = 341
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 13/234 (5%)
Query: 10 LIIYSIICISGITGEFFTLS---GIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQS 66
L+++ ++C G+TG +S + +AA + F S N + E C ++I
Sbjct: 9 LLLWVLVCF-GVTGAIEPISTTIAVGMAAALTGFLASYQNIFYYFH----ECCRPEWI-G 62
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
N L+ L+ + GQ LA I A+ N + K L +SLHG GTGKN+V+
Sbjct: 63 FNKTGLKMDLENKLFGQHLASRIILKAVSGFMSND-NPKKPLVLSLHGWTGTGKNFVSQL 121
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
I ++ YK+ S+FVH F S +HFP+ + +S Y+ QL WI NV+ C+R++FIFDE
Sbjct: 122 IAENV---YKEGMHSKFVHVFTSTLHFPHPSLLSSYKSQLQQWIKGNVSNCERSMFIFDE 178
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+DK GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+ + G
Sbjct: 179 MDKMHPGLIDSIKPYLDYYEKLDGVSYRKSIFIFLSNAGGESIVETALDFWREG 232
>gi|10798612|emb|CAC12814.1| torsinB protein [Mus musculus]
Length = 336
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 18/227 (7%)
Query: 21 ITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQL 76
+ G F +S GIAI A A Y S + +F E C ++ + N L+ L
Sbjct: 21 VAGAFEPVSVGIAIGAVSALTGYLSYTDFYCRFT------ECCHEE--RPLNTSALKLDL 72
Query: 77 KQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYK 136
++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ + +++
Sbjct: 73 EEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIVAENLYP--- 128
Query: 137 DKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE+DK G++
Sbjct: 129 -KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGII 187
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++G +
Sbjct: 188 DAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRK 234
>gi|13878825|sp|Q9ERA9.1|TOR1A_CRICR RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A
gi|10798496|emb|CAC12784.1| torsinA protein [Cricetus cricetus]
Length = 273
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 1 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGW 57
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+
Sbjct: 58 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVS 114
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 115 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 174
Query: 236 LRKSGER 242
KSG++
Sbjct: 175 FWKSGKQ 181
>gi|14149653|ref|NP_055321.1| torsin-1B precursor [Homo sapiens]
gi|297685534|ref|XP_002820342.1| PREDICTED: torsin-1B [Pongo abelii]
gi|13878818|sp|O14657.2|TOR1B_HUMAN RecName: Full=Torsin-1B; AltName: Full=Torsin family 1 member B;
Flags: Precursor
gi|12276124|gb|AAG50271.1|AF317129_1 FKSG18 [Homo sapiens]
gi|15990430|gb|AAH15578.1| Torsin family 1, member B (torsin B) [Homo sapiens]
gi|119608312|gb|EAW87906.1| torsin family 1, member B (torsin B) [Homo sapiens]
gi|123993057|gb|ABM84130.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|123993059|gb|ABM84131.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|123994041|gb|ABM84622.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000045|gb|ABM87531.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000047|gb|ABM87532.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000715|gb|ABM87866.1| torsin family 1, member B (torsin B) [synthetic construct]
Length = 336
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>gi|31559990|ref|NP_598434.2| torsin-1B precursor [Mus musculus]
gi|342187060|sp|Q9ER41.2|TOR1B_MOUSE RecName: Full=Torsin-1B; AltName: Full=Torsin family 1 member B;
Flags: Precursor
gi|17391071|gb|AAH18456.1| Torsin family 1, member B [Mus musculus]
gi|74204705|dbj|BAE35421.1| unnamed protein product [Mus musculus]
gi|74207861|dbj|BAE29062.1| unnamed protein product [Mus musculus]
gi|148676549|gb|EDL08496.1| torsin family 1, member B, isoform CRA_b [Mus musculus]
Length = 336
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 18/227 (7%)
Query: 21 ITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQL 76
+ G F +S GIAI A A Y S + +F E C ++ + N L+ L
Sbjct: 21 VAGAFEPVSVGIAIGAVSALTGYLSYTDFYCRFT------ECCHEE--RPLNTSALKLDL 72
Query: 77 KQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYK 136
++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ + +++
Sbjct: 73 EEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIVAENLYP--- 128
Query: 137 DKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE+DK G++
Sbjct: 129 -KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGII 187
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++G +
Sbjct: 188 DAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRK 234
>gi|260800801|ref|XP_002595285.1| hypothetical protein BRAFLDRAFT_128102 [Branchiostoma floridae]
gi|229280530|gb|EEN51297.1| hypothetical protein BRAFLDRAFT_128102 [Branchiostoma floridae]
Length = 348
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 15/218 (6%)
Query: 29 SGIAIAAGIAYFSPSIINSKFLNGFGGGEA----CTDKFIQSSNVRVLEEQLKQHVHGQE 84
+G+A+ G+ S L GF + C D N+ L L+ +HGQ
Sbjct: 28 TGLAVGVGVTA-------SALLAGFNHFKCNVVECCDNNWFIPNITGLRTSLQDKLHGQH 80
Query: 85 LAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFV 144
L + + A+K H +N+ + +KAL +S HG G GKN+V+ I ++F + SR V
Sbjct: 81 LVVDTVAKAVKGHIRNK-NPSKALVLSFHGWTGGGKNFVSKMIAENLFVK---GMMSRHV 136
Query: 145 HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH 204
H F + +HFP+++ V Y+ QL WI N + C +IF+FDE+DK P+GLLD + P+IDH
Sbjct: 137 HLFVATLHFPHKDRVETYKDQLREWIKGNTSDCPHSIFVFDEMDKLPEGLLDAVKPYIDH 196
Query: 205 HAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+ N + ++ TIF+ LSN+ G I + + G +
Sbjct: 197 YTEINGVDYRKTIFILLSNTAGNTITQRTYQHWQEGRK 234
>gi|395506285|ref|XP_003757465.1| PREDICTED: torsin-1B [Sarcophilus harrisii]
Length = 560
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 291 ALKLDLEEKLFGQHLAREVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 349
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ KG S FVH F S +HFP+E + LY+ QL WI NV+AC+R++FIFDE+DK
Sbjct: 350 LHP----KGLKSNFVHLFVSTLHFPHEQEIKLYQEQLQKWIRGNVSACERSVFIFDEMDK 405
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+GL+D I PF+D++ + IS++ IF+FLSN+GG I L+ ++G++ I
Sbjct: 406 LHRGLIDSIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITRMALDFWRAGKKREDIQ 463
>gi|114627155|ref|XP_001164236.1| PREDICTED: torsin-1B [Pan troglodytes]
gi|397503607|ref|XP_003822412.1| PREDICTED: torsin-1B [Pan paniscus]
gi|410211328|gb|JAA02883.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410258156|gb|JAA17045.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410297250|gb|JAA27225.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410337923|gb|JAA37908.1| torsin family 1, member B (torsin B) [Pan troglodytes]
Length = 336
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C + + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCRED--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>gi|426226111|ref|XP_004007197.1| PREDICTED: torsin-1B [Ovis aries]
Length = 301
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L++ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 32 ALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 90
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ KG S FVH F S +HFP+E H+ LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 91 LHP----KGLKSNFVHLFVSTLHFPHEQHIKLYQDQLQRWIRGNVSACAGSVFIFDEMDK 146
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 147 LHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 204
>gi|156390841|ref|XP_001635478.1| predicted protein [Nematostella vectensis]
gi|156222572|gb|EDO43415.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 130/237 (54%), Gaps = 24/237 (10%)
Query: 15 IICISGITGEF---FTLSGIAIAAGIAYFSPSIINSKFLNGFGG-----GEACTDKFIQS 66
++ +S +F F ++G IAAGIA L G GG E CTD +I S
Sbjct: 9 VLTLSNFLADFVVSFVITGPVIAAGIAT----------LFGSGGLFYYKTEHCTDGWI-S 57
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
N+ L++ L + GQ L + A+K H N+ KALA+S +G G GKNYV+
Sbjct: 58 PNMTGLKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWTGCGKNYVSKI 116
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
I ++++ D S +VH + FP+++ V Y+ QL WI+ NVT C R++FIFDE
Sbjct: 117 IAEHLYRKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTKCGRSMFIFDE 173
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI-MNTFLELRKSGER 242
+DK P+GL+ V+ PF+DH+ I F+ IFLFLSN+G I T + ++ +R
Sbjct: 174 MDKMPEGLVGVLKPFLDHYPDVAGIDFRKCIFLFLSNTGAHSINEETLMNWQRGRKR 230
>gi|51491900|ref|NP_695215.2| torsin-1A precursor [Rattus norvegicus]
gi|51260628|gb|AAH78714.1| Dystonia 1 [Rattus norvegicus]
gi|149039066|gb|EDL93286.1| dystonia 1 [Rattus norvegicus]
Length = 333
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREALQKDLDNKLFGQHLAKRVILNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQMWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
+SG++
Sbjct: 222 FWRSGKQ 228
>gi|71897317|ref|NP_001025858.1| torsin-1A precursor [Gallus gallus]
gi|53135169|emb|CAG32402.1| hypothetical protein RCJMB04_24j12 [Gallus gallus]
Length = 344
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 5/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C + Q L+E L + + GQ L + A++ N K LA+SLHG
Sbjct: 59 ECCLQRHEQRVAA-ALQESLDRRLFGQHLVSKVVVRAVRGFLSNA-QAKKPLALSLHGWT 116
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I SI+KR S +VH+F + +HFP+ + ++LY+ QL +WI NV+
Sbjct: 117 GTGKNFVSKIIAESIYKR---GLKSNYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSI 173
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + + +S++ IF+FLSN+G +I L+
Sbjct: 174 CPRSIFIFDEMDKMHAGLIDAIKPFLDYYELLDGVSYRQAIFIFLSNAGAEKITEVALDF 233
Query: 237 RKSGE 241
++G+
Sbjct: 234 WRNGK 238
>gi|402589306|gb|EJW83238.1| torsin-1B, partial [Wuchereria bancrofti]
Length = 309
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 15/224 (6%)
Query: 21 ITGEFFTL---SGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLK 77
I GE +L G AIAA ++ F K L E C +++ + L+ +
Sbjct: 20 INGEPLSLLVGVGSAIAASLSIFG-YYARCKLL------ECCDSSWVRG-DYEGLQHSMH 71
Query: 78 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKD 137
++GQ LA I A H++N KAL +S HG G GKNY++ IV ++ YK
Sbjct: 72 TRLYGQHLAKETIITAAIAHWKNP-SPKKALVMSFHGWTGCGKNYLSSMIVENL---YKK 127
Query: 138 KGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDV 197
S +VH + S +HF N + LY++QL +WI NV+ C+R++F+FDEVDK P ++D
Sbjct: 128 GMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSKCERSLFVFDEVDKMPAKVIDA 187
Query: 198 IIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
I PFIDH+ + F+ +IF+FLSNSG EI L+ + G+
Sbjct: 188 IKPFIDHYEYLEDVDFRKSIFIFLSNSGSNEIAQKALQHYEDGK 231
>gi|149410292|ref|XP_001508626.1| PREDICTED: torsin-1A-like [Ornithorhynchus anatinus]
Length = 335
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K + L + L + + GQ LA I A+ N K L +SLHG
Sbjct: 51 ECCAPK--RGLGREALRKDLDRKLFGQHLAKKVILNAVSGFVSNP-KPKKPLTLSLHGWT 107
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+ + I +I Y S +VH+F + +HFP+ ++ Y+ QL WI NV+A
Sbjct: 108 GTGKNFASKIIAENI---YDGGPKSDYVHQFVATLHFPHAQNLDQYKDQLQLWIRGNVSA 164
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK P GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 165 CSRSIFIFDEMDKMPSGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 224
Query: 237 RKSGER 242
KSG
Sbjct: 225 WKSGRE 230
>gi|346465939|gb|AEO32814.1| hypothetical protein [Amblyomma maculatum]
Length = 385
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 5/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++ + N++ L+ LK +HGQ L + ALK+HFQN KAL +S HG
Sbjct: 97 ECCAAPWV-TDNIKGLDNTLKFQLHGQPLVHRAVVRALKDHFQNP-SPKKALVLSFHGWT 154
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
G GKNY + I ++ YK+ S++V + + HFP+++ V YR L I + V
Sbjct: 155 GGGKNYASSMIAEAL---YKEGMNSKYVSLYVANKHFPHQDEVPKYRKTLQKEIEAKVKE 211
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L+
Sbjct: 212 CGRSLFIFDEIDKMPNGLIDIIKPYLDFHEKLDGVDYRKSIFIFLSNTAGDVIARATLDA 271
Query: 237 RKSG 240
K G
Sbjct: 272 WKDG 275
>gi|432884753|ref|XP_004074571.1| PREDICTED: torsin-1B-like isoform 1 [Oryzias latipes]
Length = 335
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C +++ + N L+ L+ + GQ LA I A+ N + K L +SLHG
Sbjct: 48 ETCDSRWL-TYNSTGLKMDLENKLFGQHLASRIILKAVSGFMSND-NPKKPLVLSLHGWT 105
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I ++ YK+ S+FVH F S +HFP+ + +S Y+ QL WI NV+
Sbjct: 106 GTGKNFVSQLIAENV---YKEGMHSKFVHVFTSTLHFPHPSLLSSYKSQLQQWIKGNVSN 162
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C+R++FIFDE+DK GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+
Sbjct: 163 CERSMFIFDEMDKMHPGLIDSIKPYLDYYEKLDGVSYRKSIFIFLSNAGGESIVETALDF 222
Query: 237 RKSG 240
+ G
Sbjct: 223 WREG 226
>gi|348570412|ref|XP_003470991.1| PREDICTED: torsin-1B-like [Cavia porcellus]
Length = 338
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C + + N L++ LK+ + GQ LA I AL F+N + K L +SLHG
Sbjct: 56 AECCDAE--RPLNASALKQDLKEKLFGQHLATEVILKALIG-FKNNKNPKKPLTLSLHGW 112
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + + ++ R S FVH + S +HFP+E + LY+ QL WI NV+
Sbjct: 113 AGTGKNFASQIMAENLHPR---GLKSNFVHLYVSTLHFPHEQKIKLYQDQLQKWIRGNVS 169
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 170 ACPTSVFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRRAIFIFLSNAGGDLITRTALD 229
Query: 236 LRKSGER 242
++G +
Sbjct: 230 FWRAGRK 236
>gi|296191002|ref|XP_002743422.1| PREDICTED: torsin-1A [Callithrix jacchus]
Length = 364
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|440894376|gb|ELR46845.1| Torsin-1B, partial [Bos grunniens mutus]
Length = 337
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 23/223 (10%)
Query: 30 GIAIAAG---IAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI A Y S + +F E C + + N L++ L++ + GQ LA
Sbjct: 26 GIAIGAASVLTGYLSYKDLYCRF------AECCRSE--RPLNASALKQDLEEKLFGQHLA 77
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 78 TEVIVKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 132
Query: 146 KFNSRIHFPNENHVSLYRL------QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVII 199
F S +HFP+E H+ LY+ QL WI NV+AC ++FIFDE+DK G++D I
Sbjct: 133 LFVSTLHFPHEQHIKLYQARNCYPDQLQRWIRGNVSACAGSVFIFDEMDKLHPGVIDAIK 192
Query: 200 PFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
PF+D++ + +S++ IF+FLSN+GG I T L+ ++G +
Sbjct: 193 PFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRK 235
>gi|154707898|ref|NP_001092528.1| torsin-1A precursor [Bos taurus]
gi|148745001|gb|AAI42388.1| TOR1A protein [Bos taurus]
gi|296482065|tpg|DAA24180.1| TPA: torsin A [Bos taurus]
Length = 333
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C+ K +S + L++ L + GQ LA I AL N K L +SLHG
Sbjct: 48 AECCSPK--RSLSREALQKDLDSKLFGQHLAKKVILNALSGFISNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+
Sbjct: 105 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
+SG++
Sbjct: 222 FWRSGKQ 228
>gi|332230229|ref|XP_003264290.1| PREDICTED: torsin-1A [Nomascus leucogenys]
Length = 364
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|391329449|ref|XP_003739186.1| PREDICTED: torsin-1B-like [Metaseiulus occidentalis]
Length = 375
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 20/239 (8%)
Query: 18 ISGITGEFFTLSGIAIAA--GIAYFS------------PSIINSKFLNGFGGGEACTDK- 62
++ I + G+AIAA G+A+FS P I K GG+ D
Sbjct: 21 VAAIEPVSMAVGGVAIAASAGLAWFSAFKCRHEECCEEPWIRRIKCTGQGKGGKDVKDSN 80
Query: 63 -FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKN 121
++ ++ LE LKQ +HGQ L + + GA+ H N + KAL +S HG G GKN
Sbjct: 81 VTLEENDYHYLEHVLKQSLHGQPLVYASVPGAVAQHLCNP-NPKKALVMSFHGWTGGGKN 139
Query: 122 YVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
Y + + + ++K+ + S +V + S +HFP+ + + Y+ +L I+ V C R++
Sbjct: 140 YASMLLANYLYKKGLE---SDYVKLYVSTLHFPHSDEIGRYKRKLQKEIVDQVKKCPRSM 196
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
FIFDE+DK P GL+D+I PF+D H + + ++ IF+FLSN+ G I L K+G
Sbjct: 197 FIFDEIDKMPAGLIDIIKPFLDFHVALDGVDYRKCIFVFLSNTAGDLIARQALTYWKNG 255
>gi|402896314|ref|XP_003911248.1| PREDICTED: torsin-1A [Papio anubis]
Length = 364
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|22651450|gb|AAL05259.1| torsinA [Rattus norvegicus]
Length = 333
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREALQKDLDNKLFGQHLAKRVILNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQMWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK L+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHASLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
+SG++
Sbjct: 222 FWRSGKQ 228
>gi|119608313|gb|EAW87907.1| torsin family 1, member A (torsin A), isoform CRA_a [Homo sapiens]
gi|194378180|dbj|BAG57840.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|224073506|ref|XP_002195220.1| PREDICTED: torsin-1B [Taeniopygia guttata]
Length = 347
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
C + Q N L+ QL + GQ LA + A+ F N K L +SLHG GT
Sbjct: 54 CCPRAGQRLNASALKAQLDNRLFGQHLAKDVVLKAVLG-FSNNPSPKKPLMLSLHGWAGT 112
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GKN+++ + + + S+FVH F + +HFP+ + V LY+ QL NWI NV+AC
Sbjct: 113 GKNFLSQILAEQV---HPAGLRSKFVHLFLATLHFPHHDQVKLYKEQLQNWIRGNVSACP 169
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I L+
Sbjct: 170 SSVFIFDEMDKMHPGVIDAIKPFLDYYEEVDGVSYRKAIFIFLSNAGGDLINKAALDFWA 229
Query: 239 SGERYITIH 247
SG+R I
Sbjct: 230 SGKRREDIQ 238
>gi|21450255|ref|NP_659133.1| torsin-1A precursor [Mus musculus]
gi|13878823|sp|Q9ER39.1|TOR1A_MOUSE RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|10798614|emb|CAC12785.1| torsinA protein [Mus musculus]
gi|17389254|gb|AAH17683.1| Torsin family 1, member A (torsin A) [Mus musculus]
gi|74183918|dbj|BAE35758.1| unnamed protein product [Mus musculus]
gi|148676550|gb|EDL08497.1| torsin family 1, member A (torsin A), isoform CRA_a [Mus musculus]
Length = 333
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C ++S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQ--MRSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
KSG++
Sbjct: 222 FWKSGKQ 228
>gi|403298505|ref|XP_003940058.1| PREDICTED: torsin-1A [Saimiri boliviensis boliviensis]
Length = 332
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|4557541|ref|NP_000104.1| torsin-1A precursor [Homo sapiens]
gi|13878817|sp|O14656.1|TOR1A_HUMAN RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|2358279|gb|AAC51732.1| torsinA [Homo sapiens]
gi|189069439|dbj|BAG37105.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|62511202|sp|Q60HG2.1|TOR1A_MACFA RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|52782213|dbj|BAD51953.1| dystonia 1, torsion [Macaca fascicularis]
gi|380810294|gb|AFE77022.1| torsin-1A precursor [Macaca mulatta]
gi|383412207|gb|AFH29317.1| torsin-1A precursor [Macaca mulatta]
gi|384945660|gb|AFI36435.1| torsin-1A precursor [Macaca mulatta]
Length = 332
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|241148995|ref|XP_002405989.1| torsin, putative [Ixodes scapularis]
gi|215493787|gb|EEC03428.1| torsin, putative [Ixodes scapularis]
Length = 346
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C+ +++ NV+ LE L+ +HGQ L I A+K+H QN KAL +S HG
Sbjct: 57 AECCSPPWVKD-NVKGLENTLRARLHGQPLVHRAIVRAVKDHLQNPAPK-KALVLSFHGW 114
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GKNY + + +++ +KG S++V + S HFP+++ V YR L I + V
Sbjct: 115 TGGGKNYASSMLAEALY----EKGMNSKYVSLYVSTKHFPHQDEVPKYRKSLQKEIEAKV 170
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C R +FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L
Sbjct: 171 KECGRTLFIFDEIDKMPNGLIDIIKPYLDFHEKLDDVDYRKSIFIFLSNTAGDVIARATL 230
Query: 235 ELRKSG 240
+ K G
Sbjct: 231 DAWKDG 236
>gi|12653777|gb|AAH00674.1| Torsin family 1, member A (torsin A) [Homo sapiens]
gi|30582701|gb|AAP35577.1| dystonia 1, torsion (autosomal dominant; torsin A) [Homo sapiens]
gi|60655223|gb|AAX32175.1| dystonia 1 [synthetic construct]
gi|60655225|gb|AAX32176.1| dystonia 1 [synthetic construct]
gi|123984475|gb|ABM83583.1| torsin family 1, member A (torsin A) [synthetic construct]
gi|123998443|gb|ABM86823.1| torsin family 1, member A (torsin A) [synthetic construct]
gi|307685153|dbj|BAJ20507.1| torsin family 1, member A [synthetic construct]
Length = 332
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|30584107|gb|AAP36302.1| Homo sapiens dystonia 1, torsion (autosomal dominant; torsin A)
[synthetic construct]
gi|61372206|gb|AAX43801.1| dystonia 1 torsion [synthetic construct]
Length = 333
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|332833110|ref|XP_001164380.2| PREDICTED: torsin-1A isoform 3 [Pan troglodytes]
gi|426363282|ref|XP_004048772.1| PREDICTED: torsin-1A [Gorilla gorilla gorilla]
Length = 364
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|198413583|ref|XP_002125069.1| PREDICTED: similar to Torsin family protein [Ciona intestinalis]
Length = 343
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 4/182 (2%)
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
C DK N+ L+ L+ ++GQ L + A+K+H N + +KAL +S HG G+
Sbjct: 59 CCDKHNIKPNMTGLQHDLRTKLYGQHLVEKTVYRAVKHHLANP-NPSKALVMSFHGWTGS 117
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GKNYV IV +++++ + S FVH FN+ + F ++ +V +Y+ QL +W+ NV+ C
Sbjct: 118 GKNYVAQMIVKNLYRKNLE---SSFVHVFNAEVDFKHQQNVGVYKDQLQSWLHGNVSKCG 174
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
R+IFIFDE+D P GL+D + P++ + V + + ++ TIF+FLSN+GG EI E +
Sbjct: 175 RSIFIFDEIDHMPVGLVDALKPYMSNEPVVHGVDYRKTIFIFLSNTGGQEINKKCYETWQ 234
Query: 239 SG 240
G
Sbjct: 235 LG 236
>gi|395844399|ref|XP_003794949.1| PREDICTED: torsin-1A [Otolemur garnettii]
Length = 332
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVSG-FINNPKPKKPLTLSLHGWT 104
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFMFLSNAGAERITDVALDF 221
Query: 237 RKSGER 242
++G++
Sbjct: 222 WRNGKQ 227
>gi|345805957|ref|XP_548417.3| PREDICTED: torsin-1A [Canis lupus familiaris]
Length = 332
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 104
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI SNV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRSNVSA 161
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDF 221
Query: 237 RKSGER 242
+SG++
Sbjct: 222 WRSGKQ 227
>gi|410227204|gb|JAA10821.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410252330|gb|JAA14132.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410291796|gb|JAA24498.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410340071|gb|JAA38982.1| torsin family 1, member A (torsin A) [Pan troglodytes]
Length = 332
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>gi|442754385|gb|JAA69352.1| Hypothetical protein [Ixodes ricinus]
Length = 346
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C+ +++ NV+ LE L+ +HGQ L I A+K+H QN KAL +S HG
Sbjct: 57 AECCSPPWVKD-NVKGLENTLRARLHGQPLVHRAIVRAVKDHLQNPAPK-KALVLSFHGW 114
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GKNY + + +++ +KG S++V + S HFP+++ V YR L I + V
Sbjct: 115 TGGGKNYASSMLAEALY----EKGMNSKYVSLYVSTKHFPHQDEVPKYRKSLQKEIEAKV 170
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C R +FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L
Sbjct: 171 KECGRTLFIFDEIDKMPNGLIDIIKPYLDFHEKLDDVDYRKSIFIFLSNTAGDVIARATL 230
Query: 235 ELRKSG 240
+ K G
Sbjct: 231 DAWKDG 236
>gi|354503914|ref|XP_003514025.1| PREDICTED: torsin-1B-like [Cricetulus griseus]
Length = 493
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L+ L++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+V+ + +
Sbjct: 224 ALKLDLEKKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFVSQIVAEN 282
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
++ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 283 LYP----KGLKSNFVHLFVSTLHFPHEQQIKLYQNQLQKWIRGNVSACGLSVFIFDEMDK 338
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 339 LHPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEIQ 396
>gi|432885695|ref|XP_004074720.1| PREDICTED: torsin-1B-like [Oryzias latipes]
Length = 374
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 19/237 (8%)
Query: 10 LIIYSIICISGITGEFFTLSGIAIAAGIAY-------FSPSIINSKFLNGFGGGEACTDK 62
L+++ ++C G+TG I+ A GIA + I +K N + C
Sbjct: 9 LLLWVLVC-PGVTGAIVVPFSISSALGIAMGFIISFQLTQWCIFTKLHNDLQ--QECA-- 63
Query: 63 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
S N L+ L+ + GQ LA I A+ + F + + K L +SLHG GTGKN+
Sbjct: 64 ---SFNRTGLKMDLENKLFGQHLASRIILKAV-SEFMSNDNPKKPLVLSLHGPSGTGKNF 119
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
V+ I +I YK+ +S+FVH F S +HFPN + LY+ QL WI +V+ C+R++F
Sbjct: 120 VSQLIAENI---YKEGMSSKFVHVFTSTLHFPNPRLLPLYKYQLQQWIKDSVSNCERSMF 176
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
IFDE+DK GL+D I P+++++ +S++ +IF+FLSN+GG I+ T L+ ++
Sbjct: 177 IFDEMDKMHPGLIDSIQPYLEYYDKVVGVSYRKSIFIFLSNAGGEIIVQTALDFWRA 233
>gi|297685538|ref|XP_002820344.1| PREDICTED: torsin-1A isoform 1 [Pongo abelii]
Length = 364
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 192
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 193 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 252
Query: 236 LRKSGER 242
+SG++
Sbjct: 253 FWRSGKQ 259
>gi|417399099|gb|JAA46581.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 333
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + VL++ L + GQ LA I AL N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREVLQKDLDSKLFGQHLAKKVILNALSAFISNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D + PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAVKPFLDYYDHLDGVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
+SG +
Sbjct: 222 FWRSGRQ 228
>gi|410340073|gb|JAA38983.1| torsin family 1, member A (torsin A) [Pan troglodytes]
Length = 444
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 159 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 215
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 216 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 272
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 273 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 332
Query: 236 LRKSGER 242
+SG++
Sbjct: 333 FWRSGKQ 339
>gi|113931292|ref|NP_001039096.1| torsin family 1, member A (torsin A) precursor [Xenopus (Silurana)
tropicalis]
gi|89268975|emb|CAJ83533.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
gi|169642167|gb|AAI60421.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
Length = 341
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C + N L L+Q GQ LA I A+ F N + K LA+SLHG
Sbjct: 59 ECCEPEL--PLNQTALLADLRQKFFGQHLAQEVIYRAVLG-FMNNKNPKKPLALSLHGWT 115
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I YK S+FVH F + HFP+++ V Y+ QL WI NVT
Sbjct: 116 GTGKNFVSKIISDNI---YKQGFNSKFVHLFVATHHFPHDSKVQQYKDQLHMWIRGNVTL 172
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R +FIFDE+DK GL+D I PF+D++ + +S++N+IF+FLSN+GG I LE
Sbjct: 173 CPRNLFIFDEMDKMQPGLIDAIKPFLDYYDNIDGVSYRNSIFVFLSNAGGDLITRKVLEF 232
Query: 237 RKSGER 242
K+G++
Sbjct: 233 WKAGKQ 238
>gi|317108153|ref|NP_001186944.1| torsin family 1, member A-like precursor [Danio rerio]
Length = 336
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++I S N L+ L ++GQ +A I A+ F N K L +SLHG
Sbjct: 53 ECCRPEWI-SYNKTGLKYDLDTKLYGQHVAGQVILKAVTG-FMNNKKPKKPLVLSLHGWT 110
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ + +I+ + + S FVH F + HFP+E H+ Y+ QL +WI NV+
Sbjct: 111 GTGKNFVSQLLAENIYVKGME---SSFVHLFTATAHFPHEIHIDTYKTQLQDWIRGNVSI 167
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDE+DK GL+D I P++D + N +S++ IF+FLSN+GG I+ L+
Sbjct: 168 CPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFLSNAGGENIVQVALDF 227
Query: 237 RKSGER 242
K G+
Sbjct: 228 WKDGKE 233
>gi|344271658|ref|XP_003407654.1| PREDICTED: torsin-1A [Loxodonta africana]
Length = 333
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVFG-FLNNPKPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 105 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
++G++
Sbjct: 222 FWRNGKQ 228
>gi|426226109|ref|XP_004007196.1| PREDICTED: LOW QUALITY PROTEIN: torsin-1A, partial [Ovis aries]
Length = 326
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C+ K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 41 AECCSPK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGW 97
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+
Sbjct: 98 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVS 154
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 155 ACARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALD 214
Query: 236 LRKSGER 242
+SG++
Sbjct: 215 FWRSGKQ 221
>gi|198469973|ref|XP_001355173.2| GA15729 [Drosophila pseudoobscura pseudoobscura]
gi|198147122|gb|EAL32230.2| GA15729 [Drosophila pseudoobscura pseudoobscura]
Length = 313
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 30 GIAIAA---GIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G AI A GI+YF + E C D+ I +NV+ LE+ L++ V+GQ +A
Sbjct: 7 GAAIGAASVGISYFKGQTYCRLY-------ECCDDRSI-PANVQALEKSLQEKVYGQHIA 58
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
+ +I AL HF +R + K L +S HG PGTGK++V D I ++ Y S +V K
Sbjct: 59 VPNIISALSAHFSSRVKSRKPLVLSFHGGPGTGKSFVADQIAQAL---YLQGSKSEYVAK 115
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
F R +F HV+ Y+ + + +T C R++FIFDEV+K P G+ D + +D++
Sbjct: 116 FLGRANFAQAAHVATYKEHIDREVHKRLTNCPRSLFIFDEVEKMPSGVFDTLKALLDYNG 175
Query: 207 VYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
+ ++I IF+FLSN+GGT I K G+
Sbjct: 176 LDDEIDNTQAIFIFLSNNGGTHIAEHLGNRMKGGK 210
>gi|118099300|ref|XP_415473.2| PREDICTED: torsin-1B [Gallus gallus]
Length = 365
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N L EQL + GQ LA + A+ F N K L +SLHG GTGKN+++ +
Sbjct: 85 NATALREQLDGRLFGQHLAKEVVLRAVTG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQLL 143
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+ + S+FVH F + +HFP+ V LY+ QL NWI NV+AC ++FIFDE+
Sbjct: 144 ARHV---HPAGLRSKFVHLFLATLHFPHPQRVPLYQEQLQNWIRGNVSACAHSVFIFDEM 200
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK +GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ SG+R
Sbjct: 201 DKMHQGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTSGKR 255
>gi|380030331|ref|XP_003698802.1| PREDICTED: torsin-like protein-like [Apis florea]
Length = 342
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 117/196 (59%), Gaps = 11/196 (5%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E CT+++I S ++ L+E + ++GQE+A I AL+ H + + +KAL +S HG P
Sbjct: 44 ECCTNEYILS-DIDKLDEIFNKKLYGQEMAQHVIINALRAHLTSN-NPSKALVMSFHGPP 101
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK Y++ I + + YK S+F H FN R FP ++ V+ Y+ +L II ++
Sbjct: 102 GTGKTYISQMIANFL---YKKGDQSKFYHFFNGRNDFPLQDKVNEYKDELYKIIIGSLQK 158
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISF------QNTIFLFLSNSGGTEIM 230
C+R++F+FDEVDK P+GLL+V++PF+D++ F + I++FLSN+G I
Sbjct: 159 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTWVKSWRFTSYINARKAIYIFLSNTGSARIT 218
Query: 231 NTFLELRKSGERYITI 246
L L K G + TI
Sbjct: 219 QRLLTLWKEGRQRHTI 234
>gi|148676551|gb|EDL08498.1| torsin family 1, member A (torsin A), isoform CRA_b [Mus musculus]
Length = 296
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L++ L + GQ LA I A+ N K L +SLHG GTGKN+ + I +
Sbjct: 24 ALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWTGTGKNFASKIIAEN 82
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 83 I---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVSACARSIFIFDEMDKM 139
Query: 191 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+ KSG++
Sbjct: 140 HAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDFWKSGKQ 191
>gi|355725636|gb|AES08620.1| torsin family 1, member A [Mustela putorius furo]
Length = 343
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 60 ECCGQK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 116
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 117 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 173
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 174 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDHLDGVSYQKAIFIFLSNAGAERITDVALDF 233
Query: 237 RKSGER 242
+SG++
Sbjct: 234 WRSGKQ 239
>gi|326930342|ref|XP_003211306.1| PREDICTED: torsin-1B-like [Meleagris gallopavo]
Length = 337
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N L EQL + GQ LA + A+ F N K L +SLHG GTGKN+++ +
Sbjct: 57 NATALREQLDGRLFGQHLAKEVVLRAVTG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQLL 115
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+ + S+FVH F + +HFP+ V LY+ QL NWI NV+AC ++FIFDE+
Sbjct: 116 ARHV---HPAGLRSKFVHLFLATLHFPHPQRVPLYQEQLQNWIRGNVSACAHSVFIFDEM 172
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK +GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ SG+R
Sbjct: 173 DKMHQGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTSGKR 227
>gi|224073510|ref|XP_002195238.1| PREDICTED: torsin-1A [Taeniopygia guttata]
Length = 360
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 109/172 (63%), Gaps = 6/172 (3%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L+ L + GQ L + A++ F N + K LA+SLHG GTGKN+V+ + S
Sbjct: 88 ALQGNLDNRLFGQHLVSKVVVKAVRG-FLNNTNAKKPLALSLHGWTGTGKNFVSKIVAES 146
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
I+K KG S++VH+F + +HFP+ + ++LY+ QL +WI NV+ C R++FIFDE+DK
Sbjct: 147 IYK----KGLQSKYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSVCPRSLFIFDEMDK 202
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
GL+D I PF+D++ + + +S++ IF+FLSN+G +I L+ ++G
Sbjct: 203 MHAGLIDSIKPFLDYYELLDGVSYRQAIFIFLSNAGAEKITEVALDFWRNGR 254
>gi|126297839|ref|XP_001369302.1| PREDICTED: torsin-1A [Monodelphis domestica]
Length = 335
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+A
Sbjct: 106 GTGKNFVSKIIAEHI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQQWIRGNVSA 162
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + + IS+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGISYQKAIFIFLSNAGAERITDVALDF 222
Query: 237 RKSGER 242
+SG++
Sbjct: 223 WRSGKQ 228
>gi|186469992|gb|ACC85613.1| torsin A [Sus scrofa]
Length = 251
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 237 RKSGER 242
+SG++
Sbjct: 223 WRSGKQ 228
>gi|410903756|ref|XP_003965359.1| PREDICTED: torsin-1A-like [Takifugu rubripes]
Length = 306
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C +++ N LE L+ + GQ +A I A+ N + K L +SLHG
Sbjct: 23 ECCRPEWVYF-NRTGLEADLESKLFGQHIASRIILKAVSGFMSNE-NPKKPLVLSLHGWT 80
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V++ I +IFK+ D S++VH F S +HFP+ + Y+ QL WI NV+
Sbjct: 81 GTGKNFVSELIAENIFKKGMD---SKYVHVFTSELHFPHSSQSDTYKTQLQQWIKGNVSE 137
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++F+FD +DK GL+D I P++D++ + +S++ IF+FLSN+GG I++ L+
Sbjct: 138 CGRSMFVFDGMDKMHPGLIDSIKPYLDYYDKLDGVSYRKAIFIFLSNAGGESIVDIALDF 197
Query: 237 RKSG 240
K+G
Sbjct: 198 WKAG 201
>gi|355570052|gb|EHH25579.1| hypothetical protein EGK_21435, partial [Macaca mulatta]
gi|355753002|gb|EHH57048.1| hypothetical protein EGM_06608, partial [Macaca fascicularis]
Length = 271
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 107/178 (60%), Gaps = 6/178 (3%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 2 ALKLDLEEKLFGQHLATEVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 60
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 61 LHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDK 116
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 117 LHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 174
>gi|158288268|ref|XP_310142.4| AGAP009547-PA [Anopheles gambiae str. PEST]
gi|157019168|gb|EAA05928.4| AGAP009547-PA [Anopheles gambiae str. PEST]
Length = 347
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Query: 51 NGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAI 110
NG+ C ++ +++ L L+ ++GQ +A I A+ H N + K L +
Sbjct: 55 NGYCALTECCNEVHVRFDIQELRTALESSLYGQHIARQVIVNAIGGHLGNIEQSEKPLVM 114
Query: 111 SLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI 170
SLHGLPGTGKN+V + I +++KR S FVHKF RIHFP E+ V Y+
Sbjct: 115 SLHGLPGTGKNFVAEHITRALYKR---GAASNFVHKFLGRIHFPLESEVKKYK------- 164
Query: 171 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIM 230
V C A+FIFDEV+K P GL D I+ +D+HA + F+ IF+FLSN G EI
Sbjct: 165 ---VAKCPNALFIFDEVEKMPPGLFDSIVALLDNHAYTKALDFRKAIFIFLSNVAGPEIA 221
Query: 231 NTFLELRKSG 240
L SG
Sbjct: 222 VRLKSLVDSG 231
>gi|405958380|gb|EKC24513.1| Torsin-1B [Crassostrea gigas]
Length = 624
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 133/243 (54%), Gaps = 19/243 (7%)
Query: 3 ISLL-YQHLIIYSIICISGITGEFFTLS--GIAIAAGI-AYFSPSIINSKFLNGFGGGEA 58
+SLL + + Y + +S I F L G A+ AG+ F+P I +F E
Sbjct: 279 VSLLGKKRMAEYPFVRLSAIE-PFSALGAIGTAVVAGLYTVFTP--IKCQF------KEC 329
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
CT K+I S N L+E L++ ++GQ L I LK+H +KAL +S HG GT
Sbjct: 330 CTSKWI-SLNTTALQEDLRRRLYGQHLVTDVIIKHLKSHMTK--DPSKALTLSFHGGTGT 386
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GKNYV+ I SI YK+ S++VH ++ FP+++ V LY+ +L N + S+V C
Sbjct: 387 GKNYVSKIIAESI---YKEGMRSKYVHLISATKEFPHKDMVPLYKDKLRNLVESSVNECP 443
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
+++FIFDE+DK P G+LD + P+ D + ++ +F+FLSN+ G +I L +
Sbjct: 444 QSLFIFDEIDKMPAGILDTLKPYFDFYEQLGGTDYRRAMFIFLSNTAGEDISKHALNNWR 503
Query: 239 SGE 241
S E
Sbjct: 504 SKE 506
>gi|449266759|gb|EMC77775.1| Torsin-1A, partial [Columba livia]
Length = 272
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+E L + + GQ L + F N K LA+SLHG GTGKN+V+ I SI
Sbjct: 1 LQENLDKKLFGQHLVGKVVV-KAVKGFLNNTKAKKPLALSLHGWTGTGKNFVSKIIAESI 59
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
+KR S++VH+F + +HFP+ + ++LY+ QL +WI NV+ C R++FIFDE+DK
Sbjct: 60 YKR---GLQSKYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSICPRSLFIFDEMDKMH 116
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ + +S++ IF+FLSN+G +I L+ ++G R
Sbjct: 117 AGLIDSIKPFLDYYEFLDGVSYRQAIFIFLSNAGAEKITEVALDFWRNGRR 167
>gi|390464733|ref|XP_003733271.1| PREDICTED: torsin-1A-like [Callithrix jacchus]
Length = 367
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SL G
Sbjct: 82 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLRGW 138
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 139 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 195
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 196 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 255
Query: 236 LRKSGER 242
+SG++
Sbjct: 256 FWRSGKQ 262
>gi|126513481|gb|ABO15831.1| torsin A [Sus scrofa]
Length = 333
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 237 RKSGER 242
+SG++
Sbjct: 223 WRSGKQ 228
>gi|157427720|ref|NP_001098768.1| torsin-1A precursor [Sus scrofa]
gi|126513483|gb|ABO15832.1| torsin A [Sus scrofa]
Length = 333
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 237 RKSGER 242
+SG++
Sbjct: 223 WRSGKQ 228
>gi|440894377|gb|ELR46846.1| Torsin-1A, partial [Bos grunniens mutus]
Length = 357
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 17/224 (7%)
Query: 23 GEFFTLSGIAIAAGI--AYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHV 80
GE +L G+A A G+ Y S + F E C+ K +S + L++ L +
Sbjct: 42 GEPISL-GVAPAGGVLTGYISYPRLYCLF------AECCSPK--RSLSREALQKDLDSKL 92
Query: 81 HGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGT 140
GQ LA I AL N K L +SLHG GTGKN+V+ I +I Y+
Sbjct: 93 FGQHLAKKVILNALSGFISNP-KPKKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLN 148
Query: 141 SRFVHKFNSRIHFPNENHVSLY--RLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVI 198
S +VH F + +HFP+ ++++LY R QL +WI NV+AC R+IFIFDE+DK GL+D I
Sbjct: 149 SDYVHLFVATLHFPHISNITLYKARDQLQSWIRGNVSACARSIFIFDEMDKMHAGLIDAI 208
Query: 199 IPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
P++D++ + +S+Q IF+FLSN+G I + L+ +SG++
Sbjct: 209 KPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDFWRSGKQ 252
>gi|195439148|ref|XP_002067493.1| GK16456 [Drosophila willistoni]
gi|194163578|gb|EDW78479.1| GK16456 [Drosophila willistoni]
Length = 341
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 1 MHISLLYQHLIIYSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACT 60
+ +S LY +LI+ C GI E + + + + G Y ++ + F E C
Sbjct: 8 LFVSFLYIYLILCYTDCADGI--EPISTAAVVLGVGAGY---GLLKDQTYCRFY--ECCD 60
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
++ I R L+ L+ V+GQ + HI A+ HF N + K L IS G PGTGK
Sbjct: 61 ERSIPGLT-RSLQYNLETQVYGQHIVNKHIVQAISAHFNNLGTSRKPLVISFQGQPGTGK 119
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
N+V D I +++ R + S+FVHKF R FP V Y+ +++ + +++ AC R+
Sbjct: 120 NFVADHIAKALYTRGSE---SKFVHKFLGRADFPEAIRVDTYKQHISDVVRNSLKACPRS 176
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+FIFDEVDK P G+ + + +D++A + + IF+FLSN+ G + + L K G
Sbjct: 177 LFIFDEVDKMPSGIFETLASLVDYNAFNDGTDHKKAIFIFLSNTAGVHVSDHLGTLMKGG 236
Query: 241 E 241
+
Sbjct: 237 K 237
>gi|156349542|ref|XP_001622101.1| predicted protein [Nematostella vectensis]
gi|156208527|gb|EDO30001.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 25/218 (11%)
Query: 33 IAAGIAYFSPSIINSKFLNGFGGG-------EACTDKFIQSSNVRVLEEQLKQHVHGQEL 85
+AAGIA FG G E CTD +I S N+ L++ L + GQ L
Sbjct: 16 LAAGIATL------------FGSGGLFCYKTEHCTDGWI-SPNMTGLKKSLDNRLFGQHL 62
Query: 86 AISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVH 145
+ A+K H N+ + KALA+S +G G GKNYV+ I ++K+ D S +VH
Sbjct: 63 VKDIVYKAVKGHVTNKSPH-KALALSFNGWTGCGKNYVSKIIAEHLYKKGID---SSYVH 118
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
+ FP+++ V Y+ QL WI+ NVT C R++FIFDE+DK P+GL+ V+ PF+DH+
Sbjct: 119 VMIATHDFPHKSMVETYKEQLKRWIVGNVTKCGRSMFIFDEMDKMPEGLVGVLKPFLDHY 178
Query: 206 AVYNQISFQNTIFLFLSNSGGTEI-MNTFLELRKSGER 242
I F+ IFLFLSN+G I T + ++ +R
Sbjct: 179 PDVAGIDFRKCIFLFLSNTGAHSINEETLMNWQRGRKR 216
>gi|351697009|gb|EHA99927.1| Torsin-1A [Heterocephalus glaber]
Length = 345
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 18/199 (9%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA + A+ N K L +SLHG
Sbjct: 48 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKVVLNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL----------- 164
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+
Sbjct: 105 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKAGAAGQRGGGGW 161
Query: 165 -QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSN 223
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN
Sbjct: 162 DQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSN 221
Query: 224 SGGTEIMNTFLELRKSGER 242
+G I + L+ +SG R
Sbjct: 222 AGAERITDVALDFWRSGRR 240
>gi|62859007|ref|NP_001016237.1| torsin family 1, member B (torsin B) precursor [Xenopus (Silurana)
tropicalis]
gi|89268166|emb|CAJ82105.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
gi|170284863|gb|AAI61275.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
gi|213624224|gb|AAI70808.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
gi|213624467|gb|AAI71143.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N LE ++ GQ LA I + +N+ H K L +S HG GTGKNY++ +
Sbjct: 54 NSTALELDFDSNIFGQHLAKRVILKGVTGFMKNK-HPKKPLTLSFHGWTGTGKNYISQLL 112
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+I Y S+FVH+F + +HFP+ + + Y+ QL WI NV+ C+R+IFIFDEV
Sbjct: 113 ARNI---YGHGTESQFVHQFVATLHFPHASQIDKYKDQLQAWIKGNVSNCERSIFIFDEV 169
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK GL+D I PF+D++ IS++ IF+FLSN+GG I L+ K+G++
Sbjct: 170 DKMHPGLIDAIKPFLDYYEQLEGISYRKCIFIFLSNAGGEIISKLALDFWKNGKK 224
>gi|297270059|ref|XP_001118658.2| PREDICTED: torsin-1A, partial [Macaca mulatta]
Length = 279
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L++ L + GQ LA I A+ F N K L +SLHG GTGKN+V+ I +
Sbjct: 7 ALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWTGTGKNFVSKIIAEN 65
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 66 I---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKM 122
Query: 191 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+ +SG++
Sbjct: 123 HAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDFWRSGKQ 174
>gi|110769879|ref|XP_001120885.1| PREDICTED: torsin-like protein [Apis mellifera]
Length = 320
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 119/192 (61%), Gaps = 11/192 (5%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E CT+++I S++ L+E + ++GQE+A I AL+ H + + +KAL +S HG P
Sbjct: 22 ECCTNEYI-FSDIDKLDEIFNKELYGQEMAQHVIINALRAHLTSN-NPSKALVMSFHGPP 79
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK Y++ I + YK S+F H FN R FP ++ V+ Y+ +L II+++
Sbjct: 80 GTGKTYISQMIAKFL---YKKGDQSKFYHFFNGRNDFPLQDKVNEYKDELYKIIINSLQK 136
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHA------VYNQISFQNTIFLFLSNSGGTEIM 230
C+R++F+FDEVDK P+GLL+V++PF+D++ + + I+ + I++FLSN+G + I
Sbjct: 137 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTWIKSWRLASSINARKAIYIFLSNTGSSRIT 196
Query: 231 NTFLELRKSGER 242
L L + G +
Sbjct: 197 QRLLTLWEEGRQ 208
>gi|147905796|ref|NP_001087132.1| torsin family 1, member B (torsin B) precursor [Xenopus laevis]
gi|50603704|gb|AAH78046.1| MGC82811 protein [Xenopus laevis]
Length = 327
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N LE ++ GQ LA I + +N+ K L +S HG GTGKNY++ +
Sbjct: 54 NATALELDFDNNIFGQHLAKKVILKGVTGFLRNK-QPKKPLTLSFHGWTGTGKNYISQVL 112
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+I Y S FVH+F + +HFP+ N V Y+ QL WI NV+ C+R+IFIFDEV
Sbjct: 113 ARNI---YPQGMESHFVHQFVATLHFPHANQVDKYKDQLQAWIKGNVSNCERSIFIFDEV 169
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK GL+D I PF+D++ +S++ +IF+FLSN+GG I L+ K+G++
Sbjct: 170 DKMHPGLIDSIKPFLDYYEQLEGVSYRKSIFIFLSNAGGEIISKLALDFWKNGKK 224
>gi|2358281|gb|AAC51733.1| torsinB [Homo sapiens]
Length = 266
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 75 QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 134
L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + ++
Sbjct: 1 DLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP- 58
Query: 135 YKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKG 193
KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G
Sbjct: 59 ---KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPG 115
Query: 194 LLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 116 IIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 169
>gi|47228387|emb|CAG05207.1| unnamed protein product [Tetraodon nigroviridis]
Length = 334
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 5/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++I S N L L+ + GQ +A + I A+ N+ + K L +SLHG
Sbjct: 52 ECCRPEWI-SFNRTGLAVDLENKLFGQHIASNIILKAVSGFMSNK-NPKKPLVLSLHGWT 109
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V++ I +I+K D S++VH F S +HFP+ + Y+ QL WI NV+
Sbjct: 110 GTGKNFVSELIAENIYKEGMD---SKYVHVFTSELHFPHSSQFDTYKTQLQQWIKGNVSE 166
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C ++FIFDE+DK GL+D I P++D++ + +S++ IF+FLSN+G I+ L+
Sbjct: 167 CASSMFIFDEMDKMHPGLIDSIKPYLDYYDKLDGVSYRKAIFIFLSNAGAESIVEKALDF 226
Query: 237 RKSG 240
K+G
Sbjct: 227 HKAG 230
>gi|345487784|ref|XP_001606374.2| PREDICTED: torsin-like protein-like [Nasonia vitripennis]
Length = 335
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 24/228 (10%)
Query: 25 FFTLSGIAIAAGIAYFSPSIINSKFLNGFGGG---------EACTDKFIQSSNVRVLEEQ 75
FF LS A SP I S + G E C D I S +L
Sbjct: 10 FFVLSSYMQLA-----SPLIFESLVIGGGAAAAYYMRCKMYECCDDDTIPRSTYLLLH-N 63
Query: 76 LKQHVHGQELAISHICGALKNHFQNRYHNT--KALAISLHGLPGTGKNYVTDFIVSSIFK 133
+K ++GQ++A + A+ +H +H+ K L +S HGLPG+GKNYV I ++++K
Sbjct: 64 MKAKLYGQQIAKDLVFSAIHSHV---FHSNPRKPLVLSFHGLPGSGKNYVVSMIANALYK 120
Query: 134 RYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKG 193
+ + S H FN R FPN++ V+LYR +L I + ++AC R++F+FDEVDK P G
Sbjct: 121 KGE---KSSHYHFFNGRSDFPNDHKVALYRFELDQKIKNALSACPRSMFVFDEVDKMPVG 177
Query: 194 LLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
+LD ++PF+D+ + +N IF+FLSN+G +I+N L L +G+
Sbjct: 178 VLDTLVPFLDYTS-WNNKEKSKAIFIFLSNTGSDQIVNRMLHLWINGK 224
>gi|395824225|ref|XP_003785371.1| PREDICTED: torsin-2A [Otolemur garnettii]
Length = 321
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVKDPAPTKPLVLSLHGWTGTGKSYV-----SSL 105
Query: 132 FKRYKDKG--TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
RY +G S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 LARYLFQGGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACSRSLFLFDEMDK 165
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 166 MPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|350416061|ref|XP_003490831.1| PREDICTED: torsin-like protein-like [Bombus impatiens]
Length = 349
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 117/196 (59%), Gaps = 12/196 (6%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E CT ++I SS++ L++ L + + GQE+A I AL H + + KAL +S HG P
Sbjct: 50 ECCTTEYI-SSDIDKLDDILNKELFGQEIAHRVIINALYGHLTSS-NPPKALTMSFHGPP 107
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK Y++ I + YK+ S+F H FN R FP + V+ Y+ +L II+++
Sbjct: 108 GTGKTYISQLIAKVL---YKNGDQSKFYHFFNGRNDFPLQEKVNEYKEELYTIIINSLQK 164
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-------QISFQNTIFLFLSNSGGTEI 229
C+R++F+FDEVDK P+GLL+V++PF+D++A I+ + I++FLSN+G + I
Sbjct: 165 CERSMFVFDEVDKMPEGLLNVLVPFLDYNAWVKSWRLASISINTRKAIYIFLSNTGSSRI 224
Query: 230 MNTFLELRKSGERYIT 245
L L G++ T
Sbjct: 225 TQRLLTLWGEGKQRRT 240
>gi|395506287|ref|XP_003757466.1| PREDICTED: torsin-1A [Sarcophilus harrisii]
Length = 321
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 37 ECCGRK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KTKKPLTLSLHGWT 93
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V+ I I Y+ S +VH F + +HFP+ +++ Y+ QL WI NV+A
Sbjct: 94 GTGKNFVSKIIAEHI---YEGGLNSDYVHLFVATLHFPHAGNITQYKDQLQLWIRGNVSA 150
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 151 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLIDGVSYQKAIFIFLSNAGAERITDIALDF 210
Query: 237 RKSGER 242
+SG++
Sbjct: 211 WRSGKQ 216
>gi|195133768|ref|XP_002011311.1| GI16067 [Drosophila mojavensis]
gi|193907286|gb|EDW06153.1| GI16067 [Drosophila mojavensis]
Length = 333
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 27 TLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
++G AI GI + + + KF E C ++ + ++ L++ L + ++GQ +
Sbjct: 22 AITGTAIVTGI-FGASNFFYCKF------AECCDERSV-PGDIEKLKQSLSRTLYGQHIV 73
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
++ AL H Q+ + K L +S HG PGTGK++V D I ++ Y + S++VHK
Sbjct: 74 QQYVVSALSGHLQSTNPSRKPLVMSFHGTPGTGKSFVADKIAEAL---YLEGTKSKYVHK 130
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
F R F + ++ Y+ ++ N + ++ C R++FIFDEVDK P G+ D + FID+ A
Sbjct: 131 FLGRADFAHPGRLNEYKERINNEVRQSIKQCPRSLFIFDEVDKMPIGVFDTLTSFIDYAA 190
Query: 207 VYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+ IF+FLSN+ G EI + + L KSG+R
Sbjct: 191 NKGDADYTKAIFIFLSNTAGIEISDHLVRLMKSGKR 226
>gi|338720336|ref|XP_003364155.1| PREDICTED: torsin-1A-like [Equus caballus]
Length = 327
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L++ L + GQ LA I A+ F + K L +SLHG GTGKN+ + I +I
Sbjct: 56 LQKDLNSKLFGQHLAKKVILNAVSG-FMSNAKPKKPLTLSLHGWTGTGKNFASKIIAENI 114
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 115 ---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVSACARSIFIFDEMDKMH 171
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +SG++
Sbjct: 172 AGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRSGKQ 222
>gi|340711596|ref|XP_003394361.1| PREDICTED: torsin-like protein-like [Bombus terrestris]
Length = 349
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 116/196 (59%), Gaps = 12/196 (6%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E CT ++I SS++ L++ L + + GQE+A I AL H + KAL +S HG P
Sbjct: 50 ECCTTEYI-SSDIDKLDDILNKELFGQEIAHRVIINALYGHLTAS-NPPKALTMSFHGPP 107
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK Y++ I + YK+ S+F H FN R FP + V+ Y+ +L II+++
Sbjct: 108 GTGKTYISQLIAKVL---YKNGDQSKFYHFFNGRNDFPLQEKVNEYKEELYTIIINSLQK 164
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-------QISFQNTIFLFLSNSGGTEI 229
C+R++F+FDEVDK P+GLL+V++PF+D++A I+ + I++FLSN+G + I
Sbjct: 165 CERSMFVFDEVDKMPEGLLNVLVPFLDYNAWVKSWRLASISINTRKAIYIFLSNTGSSRI 224
Query: 230 MNTFLELRKSGERYIT 245
L L G++ T
Sbjct: 225 TQRLLTLWGEGKQRRT 240
>gi|307183367|gb|EFN70225.1| Torsin-like protein [Camponotus floridanus]
Length = 354
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E CT +I S++ LE L ++GQ++A I AL+ H N+ + KAL +S HG P
Sbjct: 55 ECCTYDYI-PSDLDKLEVMLAARLYGQQIAQETIINALRGHLGNK-DSPKALVMSFHGTP 112
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKNYV I + YK+ S++ + FN R FP + V Y+ +L + + +
Sbjct: 113 GTGKNYVAQMIAKAF---YKNGVQSQYYYFFNGRNDFPLQRKVDEYKEELYEAVSNALKK 169
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-----NQISFQN-TIFLFLSNSGGTEIM 230
C+R++F+FDEVDK P+GLL++++PF+D++ + ++I +QN IF+FLSN+G ++I+
Sbjct: 170 CERSLFVFDEVDKMPEGLLNILVPFLDYNMYHKPSKQSKIVYQNKAIFIFLSNTGSSQIV 229
Query: 231 NTFLELRKSGER 242
L + G++
Sbjct: 230 QHLKSLWEKGKK 241
>gi|426223008|ref|XP_004005671.1| PREDICTED: torsin-2A [Ovis aries]
Length = 321
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 6/184 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F +++ LE L QH+ GQ LA S + ALK Q+ TK L +SLHG
Sbjct: 38 GSFCECDF--RPDLQGLECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGW 94
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ + +F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T
Sbjct: 95 TGTGKSYVSSLLAQYLFR---DGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWVQGNLT 151
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
C R++F+FDE+DK GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 152 VCSRSLFLFDEMDKLAPGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLE 211
Query: 236 LRKS 239
+S
Sbjct: 212 AWRS 215
>gi|344271874|ref|XP_003407762.1| PREDICTED: torsin-2A-like [Loxodonta africana]
Length = 321
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK+ F + TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKS-FVHDPAPTKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPVIHFPHPSHIERYKKDLKSWIQGNLTACSRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQAVLE 211
>gi|195163926|ref|XP_002022800.1| GL14553 [Drosophila persimilis]
gi|194104823|gb|EDW26866.1| GL14553 [Drosophila persimilis]
Length = 313
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
C D +NV+ LE+ L++ V+GQ +A+ HI AL HF ++ + K L +S HG PGT
Sbjct: 31 CCDVRSIPANVQALEKSLQKKVYGQHIAVPHIISALSAHFSSQVKSRKPLVLSFHGGPGT 90
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GK++V D I ++ Y S +V KF R +F HV+ Y+ + + +T C
Sbjct: 91 GKSFVADQIAQAL---YLQGSKSAYVAKFLGRANFAQAAHVATYKEHIDREVHKRLTNCP 147
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
R++FIFDEV+K P G+ D + +D++ + ++I IF+FLSN+GGT I
Sbjct: 148 RSLFIFDEVEKMPSGVFDTLKALLDYNGLDDEIDNTQAIFIFLSNNGGTHI 198
>gi|322791335|gb|EFZ15825.1| hypothetical protein SINV_04568 [Solenopsis invicta]
Length = 350
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 19/230 (8%)
Query: 18 ISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLK 77
++ + E TL +G+ Y++ + E CTD++I R LE L
Sbjct: 17 LASVRCELITLGIAGALSGLGYYAYDKYKCAY------QECCTDEYIHPDLDR-LEYMLT 69
Query: 78 QHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGLPGTGKNYVTDFIVSSIFKRYK 136
+ GQ++A I AL+ H+++ HN+ KAL +S HG PGTGKNYV I + YK
Sbjct: 70 AKLFGQDIARETIINALRGHYES--HNSPKALVMSFHGTPGTGKNYVVQMIAKAF---YK 124
Query: 137 DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLD 196
+ S++ H FN R FP + + Y+ L I + CDR++F+FDEVDK P+ LL+
Sbjct: 125 NGMQSKYFHFFNGRNDFPLQRKLDEYKENLYKVISIALQQCDRSMFVFDEVDKMPEDLLN 184
Query: 197 VIIPFIDHHAVYNQIS-----FQN-TIFLFLSNSGGTEIMNTFLELRKSG 240
V++PF+D+++ + +QN +F+FLSN+G +I+ + + G
Sbjct: 185 VLVPFLDYNSYHKSTKHSESMYQNKAVFIFLSNTGSAQIVQYLTNMWERG 234
>gi|291414333|ref|XP_002723415.1| PREDICTED: torsin family 1, member B (torsin B) [Oryctolagus
cuniculus]
Length = 351
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 129/256 (50%), Gaps = 30/256 (11%)
Query: 18 ISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVR------- 70
++G GE ++S G S +++S +G G E+ + + + VR
Sbjct: 3 VAGRLGERRSMSADQTLGGATTRSSWLLSSLGSDGVAGDESLRPRVTRQTPVRPTEYVTS 62
Query: 71 ----------------VLEEQLKQHVH---GQELAISHICGALKNHFQNRYHNTKALAIS 111
V E L++ + GQ LA I AL NR + K L +S
Sbjct: 63 THGRPGYCCDLRQLSAVARESLQRDLEKLFGQHLATEVILKALTGFKSNR-NPKKPLTLS 121
Query: 112 LHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 171
LHG GTGKN+V+ + ++ R S FVH F S +HFP+E+ LY+ QL WI
Sbjct: 122 LHGWAGTGKNFVSQILAENLHPR---GLKSNFVHLFVSTLHFPHEHKTKLYQDQLQKWIH 178
Query: 172 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 231
NV+AC ++FIFDE+DK G++D + PF+D++ + +S++ IF+FLSN+GG I
Sbjct: 179 GNVSACASSVFIFDEMDKLHPGVIDAVKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITK 238
Query: 232 TFLELRKSGERYITIH 247
T L+ ++G + I
Sbjct: 239 TALDFWRAGRKREDIQ 254
>gi|134085667|ref|NP_001076945.1| torsin-2A precursor [Bos taurus]
gi|205831096|sp|A4FUH1.1|TOR2A_BOVIN RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|133777570|gb|AAI14886.1| TOR2A protein [Bos taurus]
gi|296482066|tpg|DAA24181.1| TPA: torsin family 2, member A precursor [Bos taurus]
Length = 321
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 12/207 (5%)
Query: 33 IAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICG 92
++A A + S + F G C F + + LE L QH+ GQ LA S +
Sbjct: 21 VSAAAASWDLSSLRCNF------GSFCECDF--QPDFQGLECDLAQHLAGQHLARSLVVK 72
Query: 93 ALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
ALK Q+ TK L +SLHG GTGK+YV+ + +F+ D S VH F+ IH
Sbjct: 73 ALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYLFR---DGLRSPHVHHFSPVIH 128
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
FP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK GL++V+ PF+ V +
Sbjct: 129 FPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLAPGLIEVLRPFLGSSWVVYGTN 188
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKS 239
++ IF+F+SN+GG +I LE +S
Sbjct: 189 YRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|326930358|ref|XP_003211314.1| PREDICTED: torsin-1A-like [Meleagris gallopavo]
Length = 267
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 94/136 (69%), Gaps = 3/136 (2%)
Query: 106 KALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQ 165
K LA+SLHG GTGKN+V+ I SI+KR S +VH+F + +HFP+ + ++LY+ Q
Sbjct: 29 KPLALSLHGWTGTGKNFVSRIIAESIYKR---GLKSNYVHQFVATLHFPHAHSINLYKDQ 85
Query: 166 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSG 225
L +WI NV+ C R+IFIFDE+DK GL+D I PF+D++ + + +S++ IF+FLSN+G
Sbjct: 86 LQSWIRGNVSICPRSIFIFDEMDKMHAGLIDAIKPFLDYYELLDGVSYRQAIFIFLSNAG 145
Query: 226 GTEIMNTFLELRKSGE 241
+I L+ ++G+
Sbjct: 146 AEKITEVALDFWRNGK 161
>gi|410979368|ref|XP_003996057.1| PREDICTED: torsin-1A [Felis catus]
Length = 287
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L++ L + GQ LA I A+ N K L +SLHG GTGKN+V+ I +I
Sbjct: 16 LQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWTGTGKNFVSKIIAENI 74
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+ C R+IFIFDE+DK
Sbjct: 75 ---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSTCARSIFIFDEMDKMH 131
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +SG++
Sbjct: 132 AGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRSGKQ 182
>gi|392901705|ref|NP_502684.2| Protein TOR-1 [Caenorhabditis elegans]
gi|211970666|emb|CAA19495.2| Protein TOR-1 [Caenorhabditis elegans]
Length = 310
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L L + ++GQ L I + ++K+H+ N H K L +S HG PGTGKNYVT+ I +
Sbjct: 22 LHRDLSRFIYGQHLVIDTVVRSIKSHWHNE-HPQKPLVLSFHGGPGTGKNYVTEIIAKNT 80
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S +V F + FPN H+ Y+L+L +I + CDR+IF+FDEVDK
Sbjct: 81 FR---SGLQSPYVKYFVATKDFPNNKHIEDYKLKLKEQLIQSADGCDRSIFVFDEVDKLQ 137
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
L+ I PF+D + ++ F+ T F+FLSN G +EI N LE R++
Sbjct: 138 SELVQTIKPFLDFYPAVFEVDFRKTTFIFLSNKGSSEIANIALEHRRN 185
>gi|355764024|gb|EHH62235.1| Torsin family 2 member A [Macaca fascicularis]
Length = 321
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +HV Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHVERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|156349540|ref|XP_001622100.1| predicted protein [Nematostella vectensis]
gi|156208526|gb|EDO30000.1| predicted protein [Nematostella vectensis]
Length = 281
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 5/184 (2%)
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
CTD +I S N+ L++ L + GQ L + A+K H N+ KALA+S +G G
Sbjct: 39 CTDGWI-SPNMTGLKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWTGC 96
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GK YV+ I ++++ D S +VH + FP+++ V Y+ QL WI+ NVT C
Sbjct: 97 GKTYVSKIIAEHLYRKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTKCG 153
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
R++FIFDE+DK P+GL+ V+ PF+DH+ I F+ IFLFLSN+G + L +
Sbjct: 154 RSMFIFDEMDKMPEGLVGVLKPFLDHYPHVAGIDFRKCIFLFLSNTGAHSFIEETLMNWQ 213
Query: 239 SGER 242
G R
Sbjct: 214 RGRR 217
>gi|354490153|ref|XP_003507224.1| PREDICTED: torsin-2A-like [Cricetulus griseus]
Length = 283
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + +LK F +K L +SLHG GTGK+YV+ + +
Sbjct: 14 LECDLAQHLAGQHLAKALVVKSLKA-FVQELAPSKPLVLSLHGWTGTGKSYVSSLLAQYL 72
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 73 FQ---GGLRSPHVHHFSPTIHFPHPSHIEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 129
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 130 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 177
>gi|296190880|ref|XP_002743382.1| PREDICTED: torsin-2A [Callithrix jacchus]
Length = 321
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK N TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKAFVWNPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|383873254|ref|NP_001244720.1| torsin family 2, member A precursor [Macaca mulatta]
gi|355567889|gb|EHH24230.1| Torsin family 2 member A [Macaca mulatta]
gi|380811858|gb|AFE77804.1| prosalusin isoform a [Macaca mulatta]
gi|383417613|gb|AFH32020.1| prosalusin isoform a [Macaca mulatta]
Length = 321
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +HV Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHVERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|440900952|gb|ELR51972.1| Torsin-2A, partial [Bos grunniens mutus]
Length = 304
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 12/207 (5%)
Query: 33 IAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICG 92
++A A + S + F G C F + + LE L QH+ GQ LA S +
Sbjct: 4 VSAAAASWDLSSLRCNF------GSFCECDF--QPDFQGLECDLAQHLAGQHLARSLVVK 55
Query: 93 ALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
ALK Q+ TK L +SLHG GTGK+YV+ + +F+ D S VH F+ IH
Sbjct: 56 ALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYLFR---DGLRSPHVHHFSPVIH 111
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
FP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK GL++V+ PF+ V +
Sbjct: 112 FPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLAPGLIEVLRPFLGSSWVVYGTN 171
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKS 239
++ IF+F+SN+GG +I LE +S
Sbjct: 172 YRKAIFIFISNTGGEQINQVVLEAWRS 198
>gi|74140370|dbj|BAE42340.1| unnamed protein product [Mus musculus]
Length = 254
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>gi|363740454|ref|XP_415474.3| PREDICTED: torsin-1A isoform 2 [Gallus gallus]
Length = 334
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 130/239 (54%), Gaps = 17/239 (7%)
Query: 9 HLIIYSIICISGITGEFFTLSGIAIAAGIA----YFSP-SIINSKFLNGFGGGEACTDKF 63
H + SI+ +T LS I G A FSP S + L E C K
Sbjct: 5 HAAVLSILA-PALTPAMDPLSAYLIVGGAAITWQLFSPHSWLRCSLL------ECCNAK- 56
Query: 64 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 123
++ N V++ L++ V GQ LA+ + AL + Q++ K L +S HG GTGK++V
Sbjct: 57 -ETLNFSVVKMDLERKVFGQHLAVQIVLRALSMNLQSK-RPKKPLVMSFHGWTGTGKSFV 114
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ I ++++ + FVH F++ +HF + +HV LY+ QL +WI NV+AC R++FI
Sbjct: 115 SSIIAENLYRL--NAWRRSFVHHFSTVLHFSHGSHVHLYKEQLQSWIRGNVSACPRSLFI 172
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
F E+D+ P GL+D I+PF+ + + + + IF+FL+N+GG +I L+ + +R
Sbjct: 173 FSEMDQMPHGLIDSILPFLGYRGEIDGVHYGKAIFIFLNNAGGDKITEVALDYWRRLKR 231
>gi|402897879|ref|XP_003911965.1| PREDICTED: torsin-2A [Papio anubis]
Length = 321
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|22779883|ref|NP_690013.1| torsin-2A precursor [Mus musculus]
gi|81878903|sp|Q8R1J9.1|TOR2A_MOUSE RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|19353775|gb|AAH24469.1| Torsin family 2, member A [Mus musculus]
gi|52632426|gb|AAH03466.1| Torsin family 2, member A [Mus musculus]
gi|74183981|dbj|BAE37036.1| unnamed protein product [Mus musculus]
gi|148676626|gb|EDL08573.1| torsin family 2, member A [Mus musculus]
Length = 321
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>gi|432116601|gb|ELK37394.1| Torsin-1A [Myotis davidii]
Length = 301
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 70 RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVS 129
+ L++ L + GQ LA I AL N K L +SLHG GTGKN+ + I
Sbjct: 28 QTLQKDLDHKLFGQHLAKKVILNALTGFISNP-KPKKPLTLSLHGWTGTGKNFASKIIAE 86
Query: 130 SIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 87 NI---YEGGLHSHYVHLFVATLHFPHASNLTLYKDQLQLWIRGNVSACARSIFIFDEMDK 143
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +SG +
Sbjct: 144 MHAGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRSGRQ 196
>gi|269973842|emb|CBE66807.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQD 170
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 237 RKSGE 241
K G+
Sbjct: 231 MKGGK 235
>gi|269972460|emb|CBE66810.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 170
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 237 RKSGE 241
K G+
Sbjct: 231 MKGGK 235
>gi|449266758|gb|EMC77774.1| Torsin-1B [Columba livia]
Length = 290
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S + L+ QL + GQ LA + A+ F N K L +SLHG GTGKN+++
Sbjct: 4 SPSPAALKAQLDTKLFGQHLAKDVVLKAVMG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQ 62
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ + + S+FVH F + +HFP+ V LY+ QL NWI NV+ C ++FIFD
Sbjct: 63 ILAERV---HPAGLRSKFVHLFLATLHFPHHEQVKLYKEQLQNWIRGNVSVCPHSVFIFD 119
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYIT 245
E+DK GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ SG++
Sbjct: 120 EMDKMHPGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTSGKQREE 179
Query: 246 IH 247
I
Sbjct: 180 IQ 181
>gi|269972456|emb|CBE66808.1| CG3024-PA [Drosophila ananassae]
gi|269972462|emb|CBE66811.1| CG3024-PA [Drosophila ananassae]
gi|269972464|emb|CBE66812.1| CG3024-PA [Drosophila ananassae]
gi|269972466|emb|CBE66813.1| CG3024-PA [Drosophila ananassae]
gi|269973838|emb|CBE66805.1| CG3024-PA [Drosophila ananassae]
gi|269973840|emb|CBE66806.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 170
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 237 RKSGE 241
K G+
Sbjct: 231 MKDGK 235
>gi|194764121|ref|XP_001964180.1| GF20855 [Drosophila ananassae]
gi|190619105|gb|EDV34629.1| GF20855 [Drosophila ananassae]
Length = 340
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 56 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 114
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 115 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 171
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 172 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 231
Query: 237 RKSGE 241
K G+
Sbjct: 232 MKGGK 236
>gi|348570036|ref|XP_003470803.1| PREDICTED: torsin-2A-like [Cavia porcellus]
Length = 321
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + +LK Q+ N K L +SLHGL GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVLKSLKAFVQDPAPN-KPLVLSLHGLSGTGKSYV-----SSL 105
Query: 132 FKRYKDKGT--SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+Y +G S VH F+ IHF + NH+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 LAKYLFRGGLHSPHVHHFSPIIHFSHPNHIERYKKDLKSWVQGNLTACGRSLFLFDEMDK 165
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 166 LPLGLMEVLRPFLGASWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|355725646|gb|AES08624.1| torsin family 1, member B [Mustela putorius furo]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI A A Y S + +F E C ++ Q N L+ +L++ + GQ LA
Sbjct: 2 GIAIGAASALTGYLSYKDLYCRF------AECCREE--QRLNASALKLELEKKLFGQHLA 53
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 54 TEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL----HSKGLKSNFVH 108
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 109 LFVSTLHFPHEQQIKLYQDQLQGWIRGNVSACASSVFIFDEMDKLHPGVIDAIKPFLDYY 168
Query: 206 AVYNQISFQNTIFLFLS 222
+ +S++ IF+FLS
Sbjct: 169 EQVDGVSYRKAIFIFLS 185
>gi|355753001|gb|EHH57047.1| hypothetical protein EGM_06607 [Macaca fascicularis]
Length = 308
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 20/190 (10%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 128
VR L++ L + GQ LA I A+ F N K L +SLHG GTGKN+V+ I
Sbjct: 18 VRALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWTGTGKNFVSKIIA 76
Query: 129 SSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL----------------QLTNWIIS 172
+I Y+ S +VH F + +HFP+ ++++LY+ QL WI
Sbjct: 77 ENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMGVWNPFLDVVGFGDQLQLWIRG 133
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
NV+AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I +
Sbjct: 134 NVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDV 193
Query: 233 FLELRKSGER 242
L+ +SG++
Sbjct: 194 ALDFWRSGKQ 203
>gi|74742272|sp|Q5JU69.1|TOR2A_HUMAN RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-related protein 1; Flags: Precursor
Length = 321
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRS 215
>gi|145386578|ref|NP_001078816.1| prosalusin isoform a precursor [Homo sapiens]
gi|37181468|gb|AAQ88547.1| TOR2A [Homo sapiens]
gi|119608099|gb|EAW87693.1| torsin family 2, member A, isoform CRA_d [Homo sapiens]
Length = 321
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|383865514|ref|XP_003708218.1| PREDICTED: torsin-like protein-like [Megachile rotundata]
Length = 357
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 12/192 (6%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++I S ++ L++ L + + GQE+A + AL+ H KAL +S HG P
Sbjct: 58 ECCNSEYI-SPDLDTLDDILSKELFGQEIAHHVVVNALRGHLITS-DPPKALTMSFHGPP 115
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK ++T I + YK S F H FN R FP E ++ Y+ +L N I++++
Sbjct: 116 GTGKTFMTQMIAKFL---YKKGDHSNFYHFFNGRNDFPLEKNLEQYKEELRNLIVNSLEK 172
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-------NQISFQNTIFLFLSNSGGTEI 229
C+R++F+FDEVDK P+GLL+V++PF+D++ + N I+ + I++FLSN+G + I
Sbjct: 173 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTLIKSWRFASNSINTRKAIYIFLSNTGSSRI 232
Query: 230 MNTFLELRKSGE 241
L L G+
Sbjct: 233 TQRLLNLWGEGK 244
>gi|114626928|ref|XP_520274.2| PREDICTED: prosalusin isoform 3 [Pan troglodytes]
gi|397503470|ref|XP_003822345.1| PREDICTED: torsin-2A [Pan paniscus]
gi|410225606|gb|JAA10022.1| torsin family 2, member A [Pan troglodytes]
gi|410259694|gb|JAA17813.1| torsin family 2, member A [Pan troglodytes]
gi|410294324|gb|JAA25762.1| torsin family 2, member A [Pan troglodytes]
gi|410337665|gb|JAA37779.1| torsin family 2, member A [Pan troglodytes]
Length = 321
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|348539316|ref|XP_003457135.1| PREDICTED: torsin-1B-like [Oreochromis niloticus]
Length = 326
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 10/216 (4%)
Query: 28 LSGIAIAAGIAYFSPSIIN-SKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
LS I A + S I N ++ N F G E+C +I S N L+ L+ + GQ +A
Sbjct: 15 LSSTVINAVEPFSSFKIPNFTETWNSFWG-ESCNSYWI-SFNQTGLKADLENKLFGQHIA 72
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGT-SRFVH 145
S I + F N + K L +SLHG GTGKN+V+ I +I+K KG S+FVH
Sbjct: 73 -SDIIFKSVSGFMNDDNPKKPLVLSLHGPTGTGKNFVSQLIADNIYK----KGYHSKFVH 127
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F++ +HFP+ + + Y+ QL WI + VT C+R++FIFDE+++ P G++D I P++D+
Sbjct: 128 VFSATLHFPHRSEIVTYKSQLQEWIKNGVTNCERSVFIFDEMNQIPPGVIDSIKPYLDYG 187
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
V + FQ +I +FLSN+G +I T ++ K+G+
Sbjct: 188 KV-EGVFFQKSIIIFLSNTGADQITKTAVDFWKNGK 222
>gi|426363099|ref|XP_004048683.1| PREDICTED: prosalusin isoform 1 [Gorilla gorilla gorilla]
Length = 321
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|332230081|ref|XP_003264216.1| PREDICTED: prosalusin isoform 1 [Nomascus leucogenys]
Length = 321
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|432095397|gb|ELK26596.1| Torsin-2A [Myotis davidii]
Length = 324
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK QN TK L +SLHG GTGK+YV+ + +
Sbjct: 55 LECDLAQHLAGQHLAKALVVKALKAFVQNPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 113
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S +VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 114 FR---GGLRSPYVHHFSPVIHFPHPSHMERYKKDLKSWVQGNLTVCGRSLFLFDEMDKLT 170
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 171 PGLMEVLQPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 218
>gi|345306122|ref|XP_003428423.1| PREDICTED: torsin-1B-like [Ornithorhynchus anatinus]
Length = 306
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI A A Y S +F+ E C D+ + N L+ L+ + GQ LA
Sbjct: 41 GIAIGAASALTGYLSYPDFYCRFV------ECCRDE--RPLNATALKSDLEDKLFGQHLA 92
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 93 KEVIHKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL----HSKGLKSSFVH 147
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E LY+ QL WI NV+ C ++FIFDE+DK GL+D I PF+D++
Sbjct: 148 LFVSTLHFPHEQQTKLYQDQLRKWIRGNVSTCASSVFIFDEMDKLHPGLIDAIKPFLDYY 207
Query: 206 AVYNQISFQNTIFLFLSNSGG 226
+ +S++N IF+FL +GG
Sbjct: 208 EQIDGVSYRNAIFIFLRLAGG 228
>gi|269972458|emb|CBE66809.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP +HV Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDTYKARLNYEVRKKLQN 170
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 237 RKSGE 241
K G+
Sbjct: 231 MKDGK 235
>gi|355725649|gb|AES08625.1| torsin family 2, member A [Mustela putorius furo]
Length = 270
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 1 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 59
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 60 FR---GGLRSPHVHHFSPVIHFPHNSHMERYKKDLKSWVQGNLTACSRSLFLFDEMDKLA 116
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V++PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 117 PGLMEVLLPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVALEAWRS 164
>gi|301761930|ref|XP_002916375.1| PREDICTED: torsin-2A-like [Ailuropoda melanoleuca]
gi|281340094|gb|EFB15678.1| hypothetical protein PANDA_004446 [Ailuropoda melanoleuca]
Length = 321
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ I +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLIAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 111 FR---GGLRSPHVHHFSPVIHFPHASHMERYKKDLKSWVQGNLTACSRSLFLFDEMDKLD 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGSSWVVFGTNYRKAIFMFISNTGGEQINQVALEAWRS 215
>gi|358338120|dbj|GAA28088.2| torsin-1B [Clonorchis sinensis]
Length = 332
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ L H+HGQ +A + L H +R + KALA+S HG G GKN+V++ I S +
Sbjct: 61 LKHVLTHHLHGQHIATERVFHHLSAHMLDR-NPPKALALSFHGYTGVGKNFVSNLIASHV 119
Query: 132 FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
FKR GT SRF H ++S IHF + V Y+++L + V+AC ++F+FDE+
Sbjct: 120 FKR----GTKSRFFHFYDSTIHFAHRQKVHEYKVRLHKELREAVSACPYSVFVFDEMHNM 175
Query: 191 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
P GLLDV+ P +D H + + F+ +IFLFLSN+GG I + K G++
Sbjct: 176 PSGLLDVLAPLLDFHESIDGVDFRRSIFLFLSNAGGNSINRRLYDHLKDGKK 227
>gi|156400166|ref|XP_001638871.1| predicted protein [Nematostella vectensis]
gi|156225995|gb|EDO46808.1| predicted protein [Nematostella vectensis]
Length = 294
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 12/184 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D+ S+N+ LE K+ +GQ LA + ++K H + + +K L +SLHG GTGK
Sbjct: 19 DRLSLSANLTGLEASFKREFYGQHLATRVLLSSIKGHLKTK--GSKPLVLSLHGWTGTGK 76
Query: 121 NYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR 179
N+ T+ I +FK G S F++KF +HFP+++ +LYR QL WI SNVT C +
Sbjct: 77 NFATELIAQHLFKH----GIHSNFIYKFIIPLHFPHQSLAALYRSQLQQWITSNVTRCSK 132
Query: 180 -AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
+F+FDE+DK P+G++DV+ PF+D + F IF+FLSN+G I LE K
Sbjct: 133 GGLFVFDEMDKIPQGIVDVLKPFLDARGNH----FCKMIFVFLSNTGAKLINQHALEHYK 188
Query: 239 SGER 242
G+
Sbjct: 189 LGDE 192
>gi|268572445|ref|XP_002648964.1| Hypothetical protein CBG21284 [Caenorhabditis briggsae]
Length = 331
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 34 AAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGA 93
A I Y + FL+ + C D LE ++K V GQ L + A
Sbjct: 16 ANWIDYLMNTTTEYDFLDLYCNVLTCCDDPNIHFKYHFLEREIKTLVFGQHLVSDVVLNA 75
Query: 94 LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHF 153
+K+H+ + + KAL +S HG G GKNYV + I + F + + N F
Sbjct: 76 IKSHWL-KENPQKALVLSFHGPTGCGKNYVAEIIARNAFSGGLRSNQVKHIVATND---F 131
Query: 154 PNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISF 213
P+ ++ YR+ L + IIS V C RA+FIFDE DK P LLD I PFID+H + ++ F
Sbjct: 132 PDVRKINEYRISLRDLIISTVKKCPRALFIFDETDKLPAKLLDTIKPFIDYHPLISRFDF 191
Query: 214 QNTIFLFLSNSGGTEIMNTFLELRKSG 240
+ TIF+FLSN GG+EI N LE ++G
Sbjct: 192 RKTIFIFLSNRGGSEIANITLENYENG 218
>gi|410979152|ref|XP_003995949.1| PREDICTED: torsin-2A [Felis catus]
Length = 321
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYV-----SSL 105
Query: 132 FKRYKDKG--TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
RY +G S VH F+ IHFP+ HV Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 VARYLFRGGLRSPHVHHFSPVIHFPHPGHVERYKKDLKSWVQGNLTACSRSLFLFDEMDK 165
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 166 LAPGLMEVLRPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVALE 211
>gi|109254998|gb|ABG26997.1| torsin A [Sistrurus catenatus edwardsi]
Length = 259
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 101/159 (63%), Gaps = 10/159 (6%)
Query: 85 LAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRF 143
L + + G L N + K LA+SLHG GTGKN+V+ + S + D+G S++
Sbjct: 5 LPVKAVTGFLTNP-----NPKKPLALSLHGWTGTGKNFVSKIVAESFY----DEGLKSKY 55
Query: 144 VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID 203
VH+F S +HFP++ ++S Y+ QL WI NV++C R+IFIFDE+DK GL+D I PF+
Sbjct: 56 VHQFVSTLHFPHQQNISQYKDQLQTWIRGNVSSCARSIFIFDEMDKMHAGLIDSIKPFLP 115
Query: 204 HHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
H+ + IS++ IF+FLSN+G +I ++ K+G++
Sbjct: 116 HYEEIDGISYRKAIFIFLSNAGAEKITEVAIDHWKNGKK 154
>gi|56090243|ref|NP_001007745.1| torsin-2A precursor [Rattus norvegicus]
gi|81884643|sp|Q6AYR4.1|TOR2A_RAT RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|50926149|gb|AAH78943.1| Torsin family 2, member A [Rattus norvegicus]
gi|149038991|gb|EDL93211.1| rCG45678, isoform CRA_c [Rattus norvegicus]
Length = 321
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|225713978|gb|ACO12835.1| Torsin-1B precursor [Lepeophtheirus salmonis]
Length = 333
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 128
R L L + + GQ L + +LK+H + KAL +S HG PGTGKNYV FI
Sbjct: 57 ARNLTFTLSKAIFGQHLVTKMVTNSLKSHLL-KETPRKALVLSFHGFPGTGKNYVAKFIA 115
Query: 129 SSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
++ Y D G + H S IHFP + Y+ Q+ NWI N+T C R++F+FDEV
Sbjct: 116 DAM---YPDTGLKNPHFHLIISTIHFPIPSQSYEYKSQVQNWIKGNITNCQRSVFVFDEV 172
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK P ++D I PFID H + I F+ IF+FL N+G +I EL G +
Sbjct: 173 DKMPPNVIDGIKPFIDFHEDIDGIDFRKAIFIFLGNTGAKKINERVNELSSQGTK 227
>gi|194353264|emb|CAQ53424.1| CG3024-PA [Drosophila melanogaster]
gi|255671997|gb|ACU26618.1| CG3024 [Drosophila melanogaster]
gi|255671999|gb|ACU26619.1| CG3024 [Drosophila melanogaster]
gi|255672001|gb|ACU26620.1| CG3024 [Drosophila melanogaster]
gi|255672005|gb|ACU26622.1| CG3024 [Drosophila melanogaster]
gi|255672009|gb|ACU26624.1| CG3024 [Drosophila melanogaster]
gi|255672019|gb|ACU26629.1| CG3024 [Drosophila melanogaster]
gi|255672025|gb|ACU26632.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|255672031|gb|ACU26635.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVKQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|194353260|emb|CAQ53422.1| CG3024-PA [Drosophila melanogaster]
gi|194353266|emb|CAQ53425.1| CG3024-PA [Drosophila melanogaster]
gi|194353268|emb|CAQ53426.1| CG3024-PA [Drosophila melanogaster]
gi|194353270|emb|CAQ53427.1| CG3024-PA [Drosophila melanogaster]
gi|194353272|emb|CAQ53428.1| CG3024-PA [Drosophila melanogaster]
gi|194353274|emb|CAQ53429.1| CG3024-PA [Drosophila melanogaster]
gi|194353278|emb|CAQ53431.1| CG3024-PA [Drosophila melanogaster]
gi|255672003|gb|ACU26621.1| CG3024 [Drosophila melanogaster]
gi|255672011|gb|ACU26625.1| CG3024 [Drosophila melanogaster]
gi|255672013|gb|ACU26626.1| CG3024 [Drosophila melanogaster]
gi|255672015|gb|ACU26627.1| CG3024 [Drosophila melanogaster]
gi|255672017|gb|ACU26628.1| CG3024 [Drosophila melanogaster]
gi|255672023|gb|ACU26631.1| CG3024 [Drosophila melanogaster]
gi|255672033|gb|ACU26636.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|242005695|ref|XP_002423698.1| Torsin B precursor, putative [Pediculus humanus corporis]
gi|212506874|gb|EEB10960.1| Torsin B precursor, putative [Pediculus humanus corporis]
Length = 307
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 21/188 (11%)
Query: 55 GGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G E C FI+ +++ L++ + ++GQ + I+ + LKN F KAL I +HG
Sbjct: 32 GYERCNSNFIKP-DIKKLKKDFNELLYGQNIVINKLISTLKNRFNETPR--KALVILMHG 88
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFP--NENHVSLYRLQLTNWIIS 172
G+GK + S+FVH FN RIHFP + +V Y++ + NWI
Sbjct: 89 WTGSGKTH----------------SKSKFVHFFNGRIHFPRNKKEYVDEYKINIQNWIKG 132
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
N++ C + FIFDEVDK P G+LD I P+ D++ + ++++N IF+F+SN GG+ I
Sbjct: 133 NISNCHLSTFIFDEVDKIPAGVLDGIKPYFDYNDEIDSVNYKNGIFIFISNKGGSAINRK 192
Query: 233 FLELRKSG 240
++ L K G
Sbjct: 193 YMNLWKQG 200
>gi|335308544|ref|XP_003122220.2| PREDICTED: torsin-2A-like, partial [Sus scrofa]
Length = 236
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 34 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 92
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+ AC R++F+FDE+DK
Sbjct: 93 FR---GGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWIQGNLPACSRSLFLFDEMDKLT 149
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 150 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 197
>gi|359320512|ref|XP_851500.3| PREDICTED: torsin-2A [Canis lupus familiaris]
Length = 321
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ +L +W+ N+TAC R++F+FDE+DK
Sbjct: 111 FR---GGLHSPHVHHFSPVIHFPHASHLERYKKELKSWVQGNLTACSRSLFLFDEMDKLA 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 168 PGLMEVLRPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVVLE 211
>gi|223968747|emb|CAR94104.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V KF + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|410903758|ref|XP_003965360.1| PREDICTED: torsin-1B-like, partial [Takifugu rubripes]
Length = 272
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 4/170 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L L+ + GQ +A I A+ +N H K L + L G GTGKN+V I ++I
Sbjct: 3 LRSDLENKLVGQHIASPIIFKAVAGFMKNP-HPRKPLVLFLQGPTGTGKNFVAQMIANNI 61
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
YK S+F H F ++ FP+++ + Y+ QL WI NV+ C +IF+FDEVDK
Sbjct: 62 ---YKKGNVSQFFHVFTYQLDFPHQSQIETYKSQLQQWIKGNVSRCAHSIFVFDEVDKLH 118
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
GL D I P++DHH +S++N IF+FLSN+G ++I L+ +SG
Sbjct: 119 PGLFDSIYPYLDHHNQLQGVSYKNAIFIFLSNAGASDITKIALDFWQSGR 168
>gi|395506185|ref|XP_003757416.1| PREDICTED: torsin-2A [Sarcophilus harrisii]
Length = 397
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
++R LE L QH+ GQ L + LK +N K L +S HG GTGK+YV+
Sbjct: 121 PDLRGLECDLAQHLAGQHLVRQLVMKGLKAFVENPA-PAKPLVMSFHGWTGTGKSYVSSM 179
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+V +F+ D S VH F+ IHFP+ + + Y+ L WI+ N+TAC R++F+FDE
Sbjct: 180 LVQYLFQ---DGMASPHVHHFSPVIHFPHADQIERYQSDLKQWILGNLTACGRSLFLFDE 236
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
VDK GLL V+ PF+ V +++ IF+FLSN+GG +I L+ ++
Sbjct: 237 VDKMHPGLLGVLRPFLGPSWVVYGTNYRKAIFIFLSNAGGEQINQVALDAWRA 289
>gi|223968759|emb|CAR94110.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSKYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|223968741|emb|CAR94101.1| CG3024-PA [Drosophila melanogaster]
gi|223968745|emb|CAR94103.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRNTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|18859501|ref|NP_572178.1| torsin [Drosophila melanogaster]
gi|27923997|sp|O77277.2|TORS_DROME RecName: Full=Torsin-like protein; Flags: Precursor
gi|22831692|gb|AAF45969.2| torsin [Drosophila melanogaster]
gi|28317077|gb|AAO39557.1| LP10386p [Drosophila melanogaster]
gi|194353262|emb|CAQ53423.1| CG3024-PA [Drosophila melanogaster]
gi|220944282|gb|ACL84684.1| CG3024-PA [synthetic construct]
gi|220954126|gb|ACL89606.1| torp4a-PA [synthetic construct]
gi|223968737|emb|CAR94099.1| CG3024-PA [Drosophila melanogaster]
gi|223968739|emb|CAR94100.1| CG3024-PA [Drosophila melanogaster]
gi|223968743|emb|CAR94102.1| CG3024-PA [Drosophila melanogaster]
gi|223968749|emb|CAR94105.1| CG3024-PA [Drosophila melanogaster]
gi|223968751|emb|CAR94106.1| CG3024-PA [Drosophila melanogaster]
gi|223968753|emb|CAR94107.1| CG3024-PA [Drosophila melanogaster]
gi|223968755|emb|CAR94108.1| CG3024-PA [Drosophila melanogaster]
gi|223968757|emb|CAR94109.1| CG3024-PA [Drosophila melanogaster]
gi|255672027|gb|ACU26633.1| CG3024 [Drosophila melanogaster]
gi|255672029|gb|ACU26634.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|7331205|gb|AAF60321.1|AF236156_1 torsin-like protein [Drosophila melanogaster]
gi|3676145|emb|CAA21132.1| EG:84H4.1 [Drosophila melanogaster]
Length = 339
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 50 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 108
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 109 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 165
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 166 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 225
Query: 236 LRKSGE 241
+ K+G
Sbjct: 226 VMKNGR 231
>gi|194353276|emb|CAQ53430.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|27819927|gb|AAL39737.2| LD34179p, partial [Drosophila melanogaster]
Length = 353
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 64 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 122
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 123 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 179
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 180 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 239
Query: 236 LRKSGE 241
+ K+G
Sbjct: 240 VMKNGR 245
>gi|255672007|gb|ACU26623.1| CG3024 [Drosophila melanogaster]
gi|255672035|gb|ACU26637.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|255672021|gb|ACU26630.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGN 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>gi|149738294|ref|XP_001501517.1| PREDICTED: prosalusin-like isoform 1 [Equus caballus]
Length = 321
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ + + Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSQMERYKKDLKSWVQGNLTTCGRSLFLFDEMDKLT 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|327281540|ref|XP_003225505.1| PREDICTED: torsin-3A-like [Anolis carolinensis]
Length = 380
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Query: 56 GEAC-TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G+ C T ++N+ LE L + +HGQ L + H+ F + KAL +S HG
Sbjct: 93 GKCCATGDCRVTNNITGLELDLSRRLHGQHL-VKHVVLKAVQGFLETPNPEKALTLSFHG 151
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V + + Y+D S V F S HFP+ +V +Y++QL I V
Sbjct: 152 WSGTGKNFVARMMAEHL---YRDGLKSNCVRVFISLFHFPHSKYVDIYKVQLAREISETV 208
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C++++FIFDE +K GLLDV+ P++DHH + ++++ +IFLFLSN+GG I L
Sbjct: 209 QGCEQSLFIFDEAEKLHAGLLDVLKPYVDHHDSIDMVNYRRSIFLFLSNTGGNIINEVAL 268
Query: 235 ELRKSG 240
+ ++G
Sbjct: 269 DFWRAG 274
>gi|195565097|ref|XP_002106142.1| GD16282 [Drosophila simulans]
gi|194203514|gb|EDX17090.1| GD16282 [Drosophila simulans]
Length = 340
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I + + LE+ L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRSI-PARIDELEKSLERTLIGQHIVRQHIVPALKAHIASSDKSRKPLVISFHGQP 110
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ +++ + + +
Sbjct: 111 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVDSYKAKISLEVRQTLRS 167
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDALTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAGHLGGM 227
Query: 237 RKSGE 241
K+G
Sbjct: 228 MKNGR 232
>gi|269972989|emb|CBE67039.1| CG3024-PA [Drosophila atripex]
Length = 339
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L+E L++ ++GQ + HI AL HF +R + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIEALKESLQRTLYGQHIVAQHIIPALTAHFSSRGTSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y + S +V K+ + FP ++V Y+ ++ + + + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASNVDSYKERINSEVRRKLQS 170
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLASLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 237 RKSGE 241
G+
Sbjct: 231 MNGGK 235
>gi|17542630|ref|NP_502683.1| Protein TOR-2 [Caenorhabditis elegans]
gi|3880770|emb|CAA19484.1| Protein TOR-2 [Caenorhabditis elegans]
Length = 412
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N L + + GQ L + ++K+H+ N H+ K L +S HG GTGKNYVT+ I
Sbjct: 120 NYHALYKDFDNKIFGQHLMAESVVHSIKSHWHNE-HSQKPLVLSFHGGTGTGKNYVTEII 178
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
V++ Y+ S FV+ F + +FPN+ ++ Y+L+L + +I + C R+IFIFDE
Sbjct: 179 VNNT---YRSGMHSPFVNYFVATNNFPNKKYIEDYKLELKDQLIRSARRCQRSIFIFDET 235
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
DK L+ VI PF+D++ + F+ TIF+FLSN G EI N LE ++G+
Sbjct: 236 DKLQSELIQVIKPFLDYYPAVFGVDFRKTIFIFLSNKGSKEIANIALEHHENGK 289
>gi|195340779|ref|XP_002036990.1| GM12675 [Drosophila sechellia]
gi|194131106|gb|EDW53149.1| GM12675 [Drosophila sechellia]
Length = 340
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I + + LE L+ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRSI-PARIHELERSLESTLIGQHIVKQHIVPALKAHIASSDKSRKPLVISFHGQP 110
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ ++ + + +
Sbjct: 111 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVGSYKAKINLEVRQTLRS 167
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDALTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAGHLGSM 227
Query: 237 RKSGE 241
K+G
Sbjct: 228 MKNGR 232
>gi|345318614|ref|XP_001520965.2| PREDICTED: torsin-2A-like [Ornithorhynchus anatinus]
Length = 292
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L H+ GQ LA + A+++ Q+ +K L +S HG GTGK+YV+ +V +
Sbjct: 23 LECDLALHLAGQPLARQLVTKAVRDFVQDPA-PSKPLVLSFHGWTGTGKSYVSSLLVRYL 81
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ + S VH F+ +HFP+ + + LY+ L WI N+TAC R++F+FDE+DK
Sbjct: 82 FQ---EGMRSPHVHYFSPIVHFPHPDRIDLYKEDLKGWIQGNLTACGRSLFLFDEMDKMH 138
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE---LRKSGE 241
GL+DV+ PF+ V +++ IF+F+SN+GG +I LE LRK E
Sbjct: 139 PGLIDVLRPFLGPSWVLFGTNYRKAIFIFISNAGGEQINQLALEYWRLRKDRE 191
>gi|321462182|gb|EFX73207.1| hypothetical protein DAPPUDRAFT_129381 [Daphnia pulex]
Length = 286
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Query: 80 VHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG 139
V GQ +A + + H +N + +K L +S HG G GKN++ I +S RYK
Sbjct: 6 VFGQHIATEIVARQISAHLENP-NPSKPLVMSFHGWTGNGKNHIAYLIANS---RYKKGT 61
Query: 140 TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVII 199
S+F H F + +HFP++ H LY+ Q+ +W+ NV+ C ++F+FDEVDK P G+LD I
Sbjct: 62 KSQFYHHFMATVHFPHQEHAQLYQDQIRSWVKGNVSHCPHSLFVFDEVDKMPSGVLDGIR 121
Query: 200 PFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
++D+ + + + ++ +IF+FLSN+GG EI
Sbjct: 122 AYLDYIDIVDGVDYRKSIFIFLSNTGGKEI 151
>gi|449687076|ref|XP_004211348.1| PREDICTED: torsin-1A-like, partial [Hydra magnipapillata]
Length = 283
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Query: 59 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 118
C D +I + +V ++ L + + GQ L I + A+++H + + K L +S HG G+
Sbjct: 2 CDDNWI-NHDVSGIQNSLNEKLFGQHLVIKMVGKAVESHTKEK-SPKKPLVMSFHGWTGS 59
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GK++V D + + YK+ S+F+HK + H+P+ + Y+ +L N+I N C+
Sbjct: 60 GKSFVADIVAKHL---YKNGLKSKFIHKKIATFHYPHGGDLQKYKTELKNFIEYNAKKCE 116
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 231
R++FIFDEVDK P+GL DV+ P++D+H ++ IF+FLSN+ G +I N
Sbjct: 117 RSLFIFDEVDKLPEGLADVLKPYLDYHHALEGTDYRKNIFIFLSNTAGNKINN 169
>gi|148223816|ref|NP_001090629.1| torsin family 2, member A precursor [Xenopus (Silurana) tropicalis]
gi|89266883|emb|CAJ83950.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
Length = 314
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
++ L+ L ++V GQ LA + ++K +N + +K L +SLHG GTGK +V+ +
Sbjct: 41 DLDALDCDLARNVFGQHLARELLFKSVKEFIEND-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+T C R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTTCSRSLFVFEEM 156
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 238
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ K
Sbjct: 157 DKMHPGLIDAIVPFLGSSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWK 207
>gi|363740456|ref|XP_003642336.1| PREDICTED: torsin-1A isoform 1 [Gallus gallus]
Length = 269
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 76 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 135
L++ V GQ LA+ + AL + Q++ K L +S HG GTGK++V+ I ++++
Sbjct: 3 LERKVFGQHLAVQIVLRALSMNLQSK-RPKKPLVMSFHGWTGTGKSFVSSIIAENLYRL- 60
Query: 136 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
+ FVH F++ +HF + +HV LY+ QL +WI NV+AC R++FIF E+D+ P GL+
Sbjct: 61 -NAWRRSFVHHFSTVLHFSHGSHVHLYKEQLQSWIRGNVSACPRSLFIFSEMDQMPHGLI 119
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
D I+PF+ + + + + IF+FL+N+GG +I L+ + +R
Sbjct: 120 DSILPFLGYRGEIDGVHYGKAIFIFLNNAGGDKITEVALDYWRRLKR 166
>gi|195398849|ref|XP_002058033.1| GJ15712 [Drosophila virilis]
gi|194150457|gb|EDW66141.1| GJ15712 [Drosophila virilis]
Length = 338
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I N+ L E L Q + GQ + H+ AL H ++ + K L +S HG P
Sbjct: 49 ECCDDRSI-PGNMTKLYESLSQTLFGQHMVQQHVMPALVAHLKSDSPSRKPLVMSFHGTP 107
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK++V D I ++ Y + S++VHK+ R F + ++ Y+ ++ + +
Sbjct: 108 GTGKSFVADQIAQAL---YVEGAKSKYVHKYLGRADFAHPGRINEYKERINREVREFIQD 164
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D + +D+ A + IF+FLSN+ G I + EL
Sbjct: 165 CPRSLFIFDEVDKMPIGVFDTLTSLVDYAANVKGTDYTKAIFIFLSNTAGVRISDHLAEL 224
Query: 237 RKSG 240
K G
Sbjct: 225 MKKG 228
>gi|148233034|ref|NP_001087470.1| torsin-2A precursor [Xenopus laevis]
gi|82181813|sp|Q68F68.1|TOR2A_XENLA RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|51261412|gb|AAH79976.1| Tor2a protein [Xenopus laevis]
Length = 314
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
++ L+ L ++V GQ LA + ++K ++ + +K L +SLHG GTGK +V+ +
Sbjct: 41 DIEALDCDLARNVFGQHLAQELLFKSVKEFIESD-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+TAC R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTACGRSLFVFEEM 156
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL-RKSGER 242
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ R+ +R
Sbjct: 157 DKMHPGLIDAIVPFLGTSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWRQRKDR 212
>gi|156390839|ref|XP_001635477.1| predicted protein [Nematostella vectensis]
gi|156222571|gb|EDO43414.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L++ L + GQ L + A+K H N+ KALA+S +G G GKNYV+ I +
Sbjct: 4 LKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWTGCGKNYVSKIIAEHL 62
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
+K+ D S +VH + FP+++ V Y+ QL WI+ NVT C ++FIFDE+DK P
Sbjct: 63 YKKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTKCGPSMFIFDEMDKMP 119
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG 226
+GL+ V+ PF+DH+ I F+ IFLFLSN+G
Sbjct: 120 EGLVGVLKPFLDHYPDVAGIDFRKCIFLFLSNTGA 154
>gi|126297648|ref|XP_001365811.1| PREDICTED: torsin-2A-like [Monodelphis domestica]
Length = 321
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F ++R LE L QH+ GQ L + LK F K L +S HG
Sbjct: 36 GAFCECDF--RPDLRGLECDLAQHLAGQHLVRQLVVKRLKA-FVEDPAPAKPLVMSFHGW 92
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ +V +F+ S VH F+ IHFP+ + + Y+ L WI+ N+T
Sbjct: 93 TGTGKSYVSSMLVQYLFRHGM---ASPHVHHFSPVIHFPHADQIGRYQGDLKQWILGNLT 149
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R++F+FDEVDK GLL V+ PF+ V +++ IF+FLSN+GG +I L+
Sbjct: 150 ACGRSLFLFDEVDKMHPGLLGVLRPFLGPSWVVYGTNYRKAIFIFLSNAGGEQINQLALD 209
Query: 236 LRKS 239
++
Sbjct: 210 AWRA 213
>gi|341879135|gb|EGT35070.1| hypothetical protein CAEBREN_17173 [Caenorhabditis brenneri]
Length = 347
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 127/238 (53%), Gaps = 14/238 (5%)
Query: 6 LYQHLIIYSIICISGITGEFFTL---SGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDK 62
+ H ++ ++ I G+ GE ++ + IAIA G + I + E C +
Sbjct: 1 MRAHYVLLLLLQIVGVNGELISVLTGTAIAIATGAFWGLKDKIKCQLY------ECCHEP 54
Query: 63 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
+ + N L+ + + GQ L + ALK H+ N + K L +S HG G+GKNY
Sbjct: 55 DV-NFNYHSLDADIANLLFGQHLVKDVVVNALKAHWHNE-NPKKPLVLSFHGYTGSGKNY 112
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
V + I ++ F++ G FV + FP+++ + Y+++L N I+S V C R++F
Sbjct: 113 VAEIIANNTFRQGLRSG---FVQHIVATNDFPDKSKIEDYQMELRNRILSTVQKCHRSLF 169
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
IFDE DK P+ LL I PF+D+++ + + F+ ++F+ LSN GG +I + L+ ++G
Sbjct: 170 IFDETDKLPEQLLGAIKPFLDYYSTISGVDFRRSVFILLSNKGGGKISDITLKQYENG 227
>gi|221101785|ref|XP_002161025.1| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 331
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 12/219 (5%)
Query: 18 ISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLK 77
+S I+ E T AIAA +A S I+ + E C +++I++ + + +L
Sbjct: 15 VSNISCEPIT----AIAASVAVIS--TISFFLFSPAKNNECCNNQWIKTPSFNPFKAKLD 68
Query: 78 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKD 137
+H+ GQ L + + + NH N + T LA+S HG GTGK+YV+ I ++ D
Sbjct: 69 EHIFGQHLVNNDVSSKVVNHITNE-NPTSPLALSFHGGTGTGKSYVSKIIAELLY----D 123
Query: 138 KGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLD 196
KG S FVH F+ HF ++ ++ Y+++LT I S++ C+R++FIFDE + P GL D
Sbjct: 124 KGVDSDFVHFFHPMKHFQIKSMLNQYKIELTQKIESSLKNCERSLFIFDEFQEMPIGLSD 183
Query: 197 VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
I+PF++H+ + ++ +IF+FLSN+G I N L+
Sbjct: 184 SIVPFLEHNFNIKGVDYRKSIFIFLSNTGADIINNHVLQ 222
>gi|269973043|emb|CBE67066.1| CG3024-PA [Drosophila phaeopleura]
Length = 339
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++ I N+ L+ L++ ++GQ + HI AL HF +R + K L IS HG P
Sbjct: 55 ECCDNRSI-PGNIPALKASLQRTLYGQHIVTQHIIPALTAHFSSRDTSRKPLVISFHGQP 113
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW-IISNVT 175
GTGKN+V + I ++ Y + S +V K+ + FP ++V Y+ ++ NW + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPIASNVDSYKTRI-NWEVRRQLQ 169
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 170 SCPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGSHIADHLGN 229
Query: 236 LRKSGE 241
L K G+
Sbjct: 230 LMKGGK 235
>gi|431898848|gb|ELK07218.1| Torsin-2A [Pteropus alecto]
Length = 322
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 53 LECDLAQHLAGQHLARALVVKALKAFAQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 111
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH ++ IHFP+ +++ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 112 FR---GGLRSPHVHHYSPVIHFPHPSNMERYKKDLKSWVQGNLTVCGRSLFLFDEMDKLA 168
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
GL++V+ PF+ +V +++ IF+F+SN+GG +I LE
Sbjct: 169 PGLMEVLRPFLGSSSVVFGTNYRKAIFIFISNTGGEQINQVALE 212
>gi|351707208|gb|EHB10127.1| Torsin-2A [Heterocephalus glaber]
Length = 321
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + LK Q+ N K L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVLKLLKAFVQDPAPN-KPLVLSLHGWTGTGKSYISSLLAQYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|326679265|ref|XP_684868.5| PREDICTED: torsin-1A-like [Danio rerio]
Length = 355
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 12/247 (4%)
Query: 2 HISLLYQHLIIYSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGG--EAC 59
H+SLL + + T+ I + S +S FL F +
Sbjct: 6 HVSLLLKECTLPETKHKKKPESFALTMKVQRILTALLLVSNITSSSCFLEAFTDALKHSA 65
Query: 60 TDKFIQSSNVRV-----LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
KF + ++ V LE+ L + GQ +A + I ++ + + N K L +SLHG
Sbjct: 66 VYKFFERDDLLVFDPKRLEKDLNDFLFGQHIASNVILKSVSSFMTDSKPN-KPLVLSLHG 124
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+VT + +I+K+ ++ S+ V + S +FP+ V LY QL WI NV
Sbjct: 125 TTGTGKNHVTKILARNIYKKGEE---SKHVQIYVSEYNFPDRGKVDLYTAQLRQWIYGNV 181
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
++ R++FIFDE+DK L+DV+ PF+D+ V N +SF N IF+FLSN+GG I + L
Sbjct: 182 SSFPRSMFIFDEMDKMQPQLIDVLKPFLDYSLV-NGVSFHNAIFIFLSNAGGKVIADLAL 240
Query: 235 ELRKSGE 241
+ + G+
Sbjct: 241 DFWREGK 247
>gi|225718326|gb|ACO15009.1| Torsin-1B precursor [Caligus clemensi]
Length = 336
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 35 AGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNV--RVLEEQLKQHVHGQELAISHICG 92
AGI +++ S + N G G C ++ ++N R L + L + + GQ L +
Sbjct: 26 AGIGAVGAAVVGSFWYN-RGSGNKCYERNPDNANAMARNLTKTLSEGIFGQHLVKKMVVR 84
Query: 93 ALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
++ +H + KAL +S HGL G GKNYV I ++++ + S V+ F S +H
Sbjct: 85 SIGSHLRVE-KPAKALVLSFHGLTGVGKNYVAKMIANAMYPM--EGMNSPHVNLFISTLH 141
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
FP + Y++ + WI S++T C ++FIFDE+DK P ++D I PFID H +
Sbjct: 142 FPIASQGPAYKVIVQEWIQSSITLCPNSLFIFDEIDKMPPDVIDGIKPFIDFHENVGGRN 201
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
++ IF+FLSN+GG +I N EL G +
Sbjct: 202 YRKAIFIFLSNTGGKQITNFVHELWLYGAK 231
>gi|326930287|ref|XP_003211279.1| PREDICTED: torsin-2A-like [Meleagris gallopavo]
Length = 486
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +L + GQ L + L+ + R K L +S HG GTGK +V+ +V +
Sbjct: 217 LECELAVTLVGQPLVRQQLMKGLRRFLEKRSPE-KPLVMSFHGSTGTGKTFVSSMLVRHL 275
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F + SR+VH+F+ +HFP+ HV Y+ L +WI N+T C R++F+F+E+DK
Sbjct: 276 FP---EGLRSRYVHQFSPIVHFPHAEHVERYKENLKHWIQGNLTNCGRSVFLFEEMDKMH 332
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL+DVI+PF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 333 PGLIDVIMPFLGPSWVVYGTNYRKAIFIFISNAGGEQINEMTLDLWRA 380
>gi|194578971|ref|NP_001124104.1| uncharacterized protein LOC100170794 precursor [Danio rerio]
gi|190338900|gb|AAI63643.1| Zgc:194342 protein [Danio rerio]
Length = 323
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 60 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTG 119
TD + + R L+ + ++GQ + +S + + F + K L +S HG GTG
Sbjct: 40 TDGLLPFNRTR-LQADFDKSLYGQHI-VSDVVPKSVSFFMTDKNPNKPLVLSFHGTAGTG 97
Query: 120 KNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR 179
KN+V I +++K+ + S+ VH F S+ HFP++ +V +Y QL WI NV++ R
Sbjct: 98 KNHVAKIIARNVYKKGE---KSKHVHTFISQFHFPHQENVHMYSAQLKQWIHGNVSSFPR 154
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
++FIFDE+DK L+D+I PF+D++ + +SF IF+FLSN+GG I++ L+ +
Sbjct: 155 SMFIFDEMDKMHPELIDIIKPFLDYNYNVDGVSFHTAIFIFLSNAGGNVIVDLALDFWRK 214
Query: 240 GE 241
G+
Sbjct: 215 GK 216
>gi|195477071|ref|XP_002100080.1| GE16843 [Drosophila yakuba]
gi|194187604|gb|EDX01188.1| GE16843 [Drosophila yakuba]
Length = 341
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I + + L+ L + GQ + H+ ALK H + K L IS HG P
Sbjct: 53 ECCDDRSI-PARINELKRSLDDTLFGQHIVKQHVIPALKAHIAAGNKSRKPLVISFHGQP 111
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V + I ++ Y S +V K+ + FPN + + Y++++ + +++ +
Sbjct: 112 GTGKNFVAEQIADAL---YLQGSKSSYVTKYLGQADFPNADQLGFYKMRINLEVRNSLRS 168
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R++FIFDEVDK P G+ D++ +D++A + IF+FLSN+ G+ I +
Sbjct: 169 CPRSLFIFDEVDKMPSGVFDMLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAGHLGTM 228
Query: 237 RKSG 240
K+G
Sbjct: 229 MKNG 232
>gi|17535353|ref|NP_495917.1| Protein OOC-5, isoform a [Caenorhabditis elegans]
gi|14787712|emb|CAC44293.1| Protein OOC-5, isoform a [Caenorhabditis elegans]
Length = 350
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 16/239 (6%)
Query: 2 HISLLYQHLIIYSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTD 61
++ LL HL + IS ITG + IAI+AG + + E C +
Sbjct: 5 YVLLLLFHLCFVNTELISVITG-----TTIAISAGAFWGLKDRLKCYLY------ECCHE 53
Query: 62 KFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKN 121
+ + N L+ + + GQ L + ++K+H+ N + K L +S HG G+GKN
Sbjct: 54 PDV-NFNYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGKN 111
Query: 122 YVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
YV + I ++ F+ S FV + FP++N + Y+++L N I++ V C R+I
Sbjct: 112 YVAEIIANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSI 168
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
FIFDE DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI E +SG
Sbjct: 169 FIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEIARITKEQYESG 227
>gi|348504994|ref|XP_003440046.1| PREDICTED: torsin-3A-like [Oreochromis niloticus]
Length = 367
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 56 GEACTDKFIQ-SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G+ C + ++N+ L L+ +HGQ LA S + A++ F N + K L +S HG
Sbjct: 81 GQCCESGDCRITNNITGLARDLQTKLHGQHLAESVVLKAIQG-FINNPESNKPLTLSFHG 139
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V I ++ Y+D S V F + HFP+ V Y+ QL I V
Sbjct: 140 WSGTGKNFVARIIADNL---YRDGVKSECVRLFIAPFHFPHARLVDTYKGQLREAIRDMV 196
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C + +FIFDE +K GL+D I PF+DH+ + +S++ IFLFLSN GG I + L
Sbjct: 197 LRCPQTLFIFDEAEKLHPGLIDAIKPFMDHYDNVDGVSYRRAIFLFLSNIGGATINDVAL 256
Query: 235 ELRKSGE 241
+ SG+
Sbjct: 257 DFWHSGQ 263
>gi|190194286|ref|NP_001121738.1| torsin-3A precursor [Danio rerio]
Length = 367
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 56 GEACTDKFIQ-SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G+ C + ++N+ LE L+ +HGQ LA S + A++ +N N K L +S HG
Sbjct: 81 GQCCDSGDCRITNNITGLERDLQLKLHGQHLAQSVVLKAIQGFIKNPESN-KPLTLSFHG 139
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V + ++ Y+D S V F + HFP+ V +Y+ QL I V
Sbjct: 140 WSGTGKNFVARIVADNL---YRDGIKSECVRLFIAPFHFPHARLVDVYKGQLREAIRDMV 196
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C + +FIFDE +K GL+D I P++DH+ + +S++ IFLFLSN GG I L
Sbjct: 197 LRCPQTLFIFDEAEKLHPGLIDAIKPYMDHYDNVDGVSYRRAIFLFLSNIGGGAINEVAL 256
Query: 235 ELRKSGE 241
+ SG+
Sbjct: 257 DFWHSGQ 263
>gi|449266474|gb|EMC77527.1| Torsin-3A, partial [Columba livia]
Length = 355
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 45 INSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN 104
I S + GFG D I +N+ LE L + +HGQ LA + A++ Q+
Sbjct: 59 ILSTWYCGFGKCCETGDCRI-VNNITGLEADLNRQLHGQHLAKEVVVQAVRGFLQSP-QP 116
Query: 105 TKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL 164
KAL +S HG GTGKN+V + S + Y+D S+ V F S HFP+ +V Y+
Sbjct: 117 QKALVLSFHGWSGTGKNFVARMLASHL---YRDGLKSKCVRVFISLFHFPHHTYVDSYKA 173
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
QL I V C +++FIFDE +K LLD I PF+ + +Q+ ++ +IFLFLSN
Sbjct: 174 QLKKQISETVQLCKQSLFIFDEAEKLHFSLLDAIKPFMARYDNKDQLDYRRSIFLFLSNL 233
Query: 225 GGTEIMNTFLELRKSG 240
GG I L+ ++G
Sbjct: 234 GGNAINEVALDFWRAG 249
>gi|206557850|sp|P0C7W1.1|TOR2X_BOVIN RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-alpha; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 242
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|157105996|ref|XP_001649118.1| torsin a [Aedes aegypti]
gi|108879944|gb|EAT44169.1| AAEL004448-PA [Aedes aegypti]
Length = 346
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C +I++ +V L+ LK ++GQ + + A+ H+ N ++ K L +S HG P
Sbjct: 60 ECCRKPYIKA-DVAALKASLKGSLYGQHIVQDVLVNAIGAHYDNIENSRKPLVMSFHGTP 118
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKNYV+DF+ +++ YK+ +S+FV+K+ + S L + V
Sbjct: 119 GTGKNYVSDFVAAAL---YKNGISSKFVYKYTA----------SDLDTDLAASVKQTVKN 165
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C ++FIFDE+++ P G+ D I+ +DHH+ F +IF+FLSNS G EI L
Sbjct: 166 CPYSLFIFDEIERMPTGVFDSIVSLLDHHSALKGFDFTKSIFIFLSNSAGIEIAKKLKSL 225
Query: 237 RKSG 240
G
Sbjct: 226 MDDG 229
>gi|17535351|ref|NP_495916.1| Protein OOC-5, isoform b [Caenorhabditis elegans]
gi|27923866|sp|Q95NU5.1|TORS_CAEEL RecName: Full=Torsin-like protein; AltName: Full=Abnormal oocyte
formation protein 5; Flags: Precursor
gi|14787713|emb|CAC44294.1| Protein OOC-5, isoform b [Caenorhabditis elegans]
Length = 356
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 126/240 (52%), Gaps = 12/240 (5%)
Query: 2 HISLLYQHLIIYSIICISGITGEFF-TLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACT 60
++ LL HL + IS ITG+ + + IAI+AG + + E C
Sbjct: 5 YVLLLLFHLCFVNTELISVITGKIKDSGTTIAISAGAFWGLKDRLKCYLY------ECCH 58
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
+ + + N L+ + + GQ L + ++K+H+ N + K L +S HG G+GK
Sbjct: 59 EPDV-NFNYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGK 116
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
NYV + I ++ F+ S FV + FP++N + Y+++L N I++ V C R+
Sbjct: 117 NYVAEIIANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRS 173
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
IFIFDE DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI E +SG
Sbjct: 174 IFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEIARITKEQYESG 233
>gi|291225280|ref|XP_002732628.1| PREDICTED: torsin family 1, member B (torsin B)-like [Saccoglossus
kowalevskii]
Length = 321
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 6/184 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C+ +I + + L L+++V GQ + + + ++ H NR + KAL +S HG
Sbjct: 28 ETCSKAWI-TLDTDGLAHDLEKNVFGQHIVRTVVLRSVSRHINNR-NPDKALVLSFHGWG 85
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
G GK YV+ F+ ++ YK+ S+FVH S +P+ + Y+ +L + I+
Sbjct: 86 GIGKTYVSQFLAKNL---YKEGTRSKFVHLITSS-DYPHSKKLDDYKDELRSRIMEAGKL 141
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
CDR +FIF+++DK P GL+DV+ PFID++ Y + ++ IF+F SNSGG I N E+
Sbjct: 142 CDRQLFIFEDMDKMPPGLIDVLKPFIDNYPEYFSVDYRKNIFVFTSNSGGHIINNKVFEM 201
Query: 237 RKSG 240
K G
Sbjct: 202 WKQG 205
>gi|410921496|ref|XP_003974219.1| PREDICTED: torsin-3A-like [Takifugu rubripes]
Length = 361
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 56 GEACTDKFIQ-SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G+ C + ++N+ L + L+ +HGQ LA S + A++ F N + K L +S HG
Sbjct: 75 GQCCESGDCRITNNITGLSKDLQTKLHGQHLAQSVVLKAIQG-FINNPESNKPLTLSFHG 133
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V I ++ Y+D S V F + HFP+ V Y+ QL I V
Sbjct: 134 WSGTGKNFVARMIADNL---YRDGVKSECVRLFIAPFHFPHTRLVDAYKGQLREAIRDMV 190
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C + +FIFDE +K GL+D I P++DH+ + +S++ IFLFLSN GG I + L
Sbjct: 191 LRCPQTLFIFDEAEKLHPGLIDAIKPYMDHYDNVDGVSYRTAIFLFLSNIGGATINDVAL 250
Query: 235 ELRKSGE 241
+ SG+
Sbjct: 251 DFWHSGQ 257
>gi|224058998|ref|XP_002191767.1| PREDICTED: torsin-3A [Taeniopygia guttata]
Length = 410
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+N+ LE L +HGQ LA + A++ Q+ KAL +S HG GTGKN+V
Sbjct: 135 NNITGLEADLSGQLHGQHLAKDVVVRAVQGFLQSP-RPRKALVLSFHGWSGTGKNFVARM 193
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ S + Y+D S V F S +HFP+ N+V Y+ QL I + C +A+ IFDE
Sbjct: 194 VASHL---YRDGLRSDCVRVFVSLLHFPHHNYVDSYKAQLQRQISETLQRCRQALLIFDE 250
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
+K LLD I PF+ H Q Q +IFLFLSN GG I L+ ++G
Sbjct: 251 AEKLHSNLLDAIKPFMAQHGSEGQADQQRSIFLFLSNLGGNTINEVALDFWRAGR 305
>gi|332833066|ref|XP_003312381.1| PREDICTED: prosalusin isoform 1 [Pan troglodytes]
Length = 242
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|449265765|gb|EMC76908.1| Torsin-2A, partial [Columba livia]
Length = 267
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 76 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 135
L +++ GQ L + L+ F + + K L +S HG GTGK YV+ +V +F+
Sbjct: 2 LARNLVGQPLVRQQVMKGLRE-FLEKQNPVKPLVMSFHGSTGTGKTYVSSMLVRYLFQ-- 58
Query: 136 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
S +VH+F+ +HFP+ H+ Y+ L WI N+T C R+ F+FDE+DK GL+
Sbjct: 59 -GGLQSPYVHQFSPLVHFPHAEHIEQYKENLKRWIQGNLTNCGRSAFLFDEMDKMHPGLI 117
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DVIIPF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 118 DVIIPFLGPSWVVYGNNYRKAIFIFISNAGGEQINEMTLDLWRA 161
>gi|224073396|ref|XP_002194162.1| PREDICTED: torsin-2A, partial [Taeniopygia guttata]
Length = 268
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 76 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 135
L +V GQ L + ++ +N + K L +S HG GTGK YV+ ++ +F+R
Sbjct: 3 LATNVVGQPLVRQQVMKGVREFLENP-NPVKPLVMSFHGSTGTGKTYVSSMLIRYLFQR- 60
Query: 136 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
S +VH F+ +HFP+ + Y+ L WI N+T C R+ F+FDE+DK GL+
Sbjct: 61 --GLQSPYVHHFSPIVHFPHAEQIEQYKESLKRWIQGNLTNCGRSAFLFDEMDKMHPGLI 118
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DVIIPF+ V +++ IF+F+SN+GG +I N L L ++
Sbjct: 119 DVIIPFLGPSWVVYGTNYRKAIFIFISNAGGEQINNVTLALWRA 162
>gi|197313700|ref|NP_001127902.1| prosalusin isoform c precursor [Homo sapiens]
gi|74750929|sp|Q8N2E6.1|TOR2X_HUMAN RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-alpha; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
gi|22761716|dbj|BAC11667.1| unnamed protein product [Homo sapiens]
gi|119608100|gb|EAW87694.1| torsin family 2, member A, isoform CRA_e [Homo sapiens]
Length = 242
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|205831098|sp|P0C7W3.1|TOR2X_MOUSE RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 231
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F ++ LE L QH+ GQ LA + + +LK Q+ +K L +SLHG
Sbjct: 38 GSFCECDFW--PDLPGLECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGW 94
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ + +F+ D S VH F+ IHFP+ + Y+ +L +W+ N+T
Sbjct: 95 TGTGKSYVSSLLAQHLFR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLT 151
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
AC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+
Sbjct: 152 ACGRSLFLFDEMDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFI 197
>gi|426363101|ref|XP_004048684.1| PREDICTED: prosalusin isoform 2 [Gorilla gorilla gorilla]
Length = 242
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|145386549|ref|NP_569726.2| prosalusin isoform b precursor [Homo sapiens]
gi|162318066|gb|AAI56919.1| Torsin family 2, member A [synthetic construct]
gi|162319250|gb|AAI56123.1| Torsin family 2, member A [synthetic construct]
gi|182888133|gb|AAI60144.1| Torsin family 2, member A [synthetic construct]
Length = 253
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|14042534|dbj|BAB55288.1| unnamed protein product [Homo sapiens]
gi|119608097|gb|EAW87691.1| torsin family 2, member A, isoform CRA_b [Homo sapiens]
Length = 253
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|332230083|ref|XP_003264217.1| PREDICTED: prosalusin isoform 2 [Nomascus leucogenys]
Length = 256
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|194888337|ref|XP_001976900.1| GG18527 [Drosophila erecta]
gi|190648549|gb|EDV45827.1| GG18527 [Drosophila erecta]
Length = 341
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I + + +L+ L + + GQ + H+ ALK H + K L IS HG P
Sbjct: 53 ECCDDRSI-PARIDLLKRSLDETLIGQHIVKQHVVSALKAHINANSKSRKPLVISFHGQP 111
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGKN+V++ I ++ Y S +V K+ + FPN++ V Y+ ++ + +++
Sbjct: 112 GTGKNFVSEQIADAL---YLLGSKSSYVTKYLGQADFPNQSMVDAYKNRINIEVRNSLRR 168
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 169 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 221
>gi|431898901|gb|ELK07271.1| Torsin-1A [Pteropus alecto]
Length = 382
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Query: 113 HGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL-------- 164
HG GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++V+LY+
Sbjct: 140 HGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKARAEFRNSS 196
Query: 165 ---QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FL
Sbjct: 197 WMDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDNLDGVSYQKAIFIFL 256
Query: 222 SNSGGTEIMNTFLELRKSGERYITIH 247
SN+G I + LE +SG++ I
Sbjct: 257 SNAGAERITDVALEFWRSGKQREEIQ 282
>gi|47225644|emb|CAG07987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 56 GEACTDKFIQ-SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
G+ C + ++N+ L L+ +HGQ LA S + A++ F N + K L +S HG
Sbjct: 61 GQCCESGDCRITNNITGLARDLQTKLHGQHLAQSVVLKAIQG-FINNPESNKPLTLSFHG 119
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V I ++ Y+D S V F + HFP+ V Y+ QL I V
Sbjct: 120 WSGTGKNFVARMIADNL---YRDGVKSECVRLFIAPFHFPHARLVDAYKGQLREAIRDLV 176
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C + + IFDE +K GL+D I P++DH+ + +S++ IFLFLSN GG I + L
Sbjct: 177 LRCPQTLLIFDEAEKLHPGLIDAIKPYMDHYDNVDGVSYRTAIFLFLSNIGGAAINDVAL 236
Query: 235 ELRKSGE 241
+ SG+
Sbjct: 237 DFWHSGQ 243
>gi|206557851|sp|P0C7W2.1|TOR2X_RAT RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 231
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F ++ LE L +H+ GQ LA + + +LK Q+ +K L +SLHG
Sbjct: 38 GSFCECDFW--PDLPGLECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGW 94
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ + +F+ S VH F+ IHFP+ +H Y+ +L +W+ N+T
Sbjct: 95 TGTGKSYVSSLLAQYLFR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLT 151
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
AC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+
Sbjct: 152 ACGRSLFLFDEMDKLPPGLMEVLKPFLGPSWVVYGTNYRKAIFIFI 197
>gi|210111770|gb|ACJ07156.1| torsin 2A [Sus scrofa]
Length = 146
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 1 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 59
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+TAC R++F+FDE+DK
Sbjct: 60 FR---GGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWIQGNLTACSRSLFLFDEMDKLT 116
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 117 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 146
>gi|363740424|ref|XP_415507.3| PREDICTED: torsin-2A-like [Gallus gallus]
Length = 324
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +L + GQ L + L+ + R K L +S HG GTGK +V+ +V +
Sbjct: 55 LECELAVTLVGQPLVRRQLMEGLRQFLEKRS-PEKPLVMSFHGSTGTGKTFVSAMLVRHL 113
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F + S VH+F+ +HFP+ HV Y+ L +WI N+T C R++F+F+E+DK
Sbjct: 114 FP---EGLQSPHVHQFSPIVHFPHAEHVERYKENLKHWIQGNLTNCGRSVFLFEEMDKMH 170
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL+DVI+PF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 171 PGLIDVIMPFLGPSWVVYGTNYRKAIFIFISNAGGEQINEMTLDLWRA 218
>gi|449684272|ref|XP_002171133.2| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 299
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 7/179 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C ++++Q+ ++ LE + V GQ L H+ A+ +H + + L +S HG
Sbjct: 13 NECCNNEWLQTPSLSDLENVISSKVFGQHLINKHVSTAVIHHIKTN-NPASPLVMSFHGG 71
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V+ I SIFK KG S+FV + HFPN+N + Y+ +L+ I ++
Sbjct: 72 TGTGKNFVSQIIAESIFK----KGLNSKFVRVIRATKHFPNKNKLEEYKNELSRLIENSA 127
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 233
C+R +FIFDE + P GL D I PF+D++ + I ++ IF+FLSN+ +I+N++
Sbjct: 128 KLCERTLFIFDEFHEMPIGLGDSIAPFLDYNNQLDGIDYRKNIFIFLSNTTA-DIINSY 185
>gi|195059693|ref|XP_001995684.1| GH17628 [Drosophila grimshawi]
gi|193896470|gb|EDV95336.1| GH17628 [Drosophila grimshawi]
Length = 271
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L L + GQ + H+ AL H ++ + K+L +S HG PGTGK++V D I ++
Sbjct: 4 LHHSLSTTLFGQHMVSQHVLPALVAHLKSNSPSRKSLVMSFHGTPGTGKSFVADQIAEAL 63
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y + S+FVHK+ R F + V Y+ ++ + ++ C R++FIFDEVDK P
Sbjct: 64 ---YLEGTKSKFVHKYLGRADFAHPARVHEYKNRINKEVRESIRDCPRSLFIFDEVDKMP 120
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
G+ D + +D+ I + IF+FLSN+ G I + +L K G R
Sbjct: 121 IGIFDTLTSLVDYAGNGGDIDYTKAIFIFLSNTAGIRISDHLADLMKKGTR 171
>gi|338720542|ref|XP_003364191.1| PREDICTED: prosalusin-like isoform 2 [Equus caballus]
Length = 242
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ + + Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSQMERYKKDLKSWVQGNLTTCGRSLFLFDEMDKLT 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|268532522|ref|XP_002631389.1| C. briggsae CBR-OOC-5 protein [Caenorhabditis briggsae]
Length = 350
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ + + GQ L + A+K H+ N + K L +S HG G+GKNYV + I ++
Sbjct: 63 LDADIANMLFGQHLVKDVVVNAIKAHWHNE-NPKKPLVLSFHGYTGSGKNYVAEIIANNT 121
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
FK+ S F+ + FP++N + Y+ +L N I++ C R+IFIFDE DK P
Sbjct: 122 FKQ---GLRSNFIQHIVATNDFPDKNKIEEYKTELRNRILTTAQKCHRSIFIFDETDKLP 178
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+ LL I PF+D+++ + + F+ +IF+ LSN GG +I L+ ++G
Sbjct: 179 EQLLGAIKPFLDYYSKISGVDFRRSIFILLSNKGGGKIAEITLKQYENG 227
>gi|308509242|ref|XP_003116804.1| CRE-OOC-5 protein [Caenorhabditis remanei]
gi|308241718|gb|EFO85670.1| CRE-OOC-5 protein [Caenorhabditis remanei]
Length = 367
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ + ++GQ L + A+K H+ N K L +S HG G+GKNYV + I ++
Sbjct: 80 LDADIANLLYGQHLVKDVVVNAIKAHWFNE-SPRKPLVLSFHGYTGSGKNYVAEIIANNT 138
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
FK+ S FV + FP+++ + Y+++L N I++ V C R+IFIFDE DK P
Sbjct: 139 FKQ---GLRSNFVQHIVATNDFPDKSKIEDYQMELRNRILTTVQKCHRSIFIFDETDKLP 195
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+ LL I PF+D+++ + + F+ +IF+ LSN GG +I L+ ++G
Sbjct: 196 EQLLGAIKPFLDYYSSVSGVDFRRSIFILLSNKGGGKIAEITLKQYENG 244
>gi|50751128|ref|XP_422270.1| PREDICTED: torsin-3A [Gallus gallus]
Length = 405
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+N+ LE L + +HGQ LA + A++ Q+ KAL +S HG GTGKN+V
Sbjct: 131 NNITGLELDLHEQLHGQHLAKEVVIQAVRGFLQSP-QPQKALVLSFHGWSGTGKNFVARM 189
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + + Y+D S V F + HFP+ +V Y++QL I V C++++FIFDE
Sbjct: 190 VAAHL---YRDGLKSECVRVFIALFHFPHHKYVDSYKVQLEKQISETVQLCEQSLFIFDE 246
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+K GLLDVI PF+ + Q + +IFLFLSN GG+ I L+ ++G
Sbjct: 247 AEKLHSGLLDVIKPFMA-RSDKGQQDNRRSIFLFLSNIGGSAINEVALDFWRAG 299
>gi|126306459|ref|XP_001374059.1| PREDICTED: torsin-3A-like [Monodelphis domestica]
Length = 400
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 57 EAC-TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D ++N+ LE L +HGQ LA I +++ F + K L +S HG
Sbjct: 115 ECCGRDDCRITNNITGLETDLSIRLHGQHLAQEVILKSVRG-FLSVPQPKKPLVLSFHGW 173
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+VT + + Y+D S V F S +HFP+ +V +Y+ +L + V
Sbjct: 174 TGTGKNFVTRILADHL---YRDGLESECVQVFISTLHFPHLRYVDMYKEKLKRQVRDTVK 230
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
C +A+F+FDE +K P LL+ + PF++ HA ++ ++ IFLFLSN GG I L
Sbjct: 231 NCGQALFVFDEAEKLPPSLLETLKPFLN-HATVGEVDYRRAIFLFLSNLGGNIINEVVLN 289
Query: 236 LRKSG 240
K+G
Sbjct: 290 WLKAG 294
>gi|449682277|ref|XP_002160115.2| PREDICTED: uncharacterized protein LOC100214659 [Hydra
magnipapillata]
Length = 643
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 106/174 (60%), Gaps = 9/174 (5%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++++ ++ LE++L + V GQ L + A+ +H +N+ + L +S HG
Sbjct: 60 ECCNNQWL-IQDLSGLEKELNEKVFGQHLVNKLVGKAVNSHIKNK-DSKSPLVMSFHGWT 117
Query: 117 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK +V+ + +S+FK KG S+FV++ FP+ H+ Y+++L +I +N+
Sbjct: 118 GTGKTFVSQIVANSLFK----KGINSKFVYQKIVTKDFPHNFHLEKYKIELNEYIKTNIG 173
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
C+R +FIFDE +K P+GL +V+ P++++ N ++ +IF+FLSN+ G +I
Sbjct: 174 KCERTLFIFDEFEKMPEGLANVMTPYLENQI--NSQDYRKSIFIFLSNTAGDKI 225
>gi|351697010|gb|EHA99928.1| Torsin-1B [Heterocephalus glaber]
Length = 306
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 20/177 (11%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
++ R L++ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+
Sbjct: 48 PADSRALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQ 106
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ + R S FVH ++ QL WI NV+ C ++FIFD
Sbjct: 107 IMADHLHPR---GLKSHFVHLYD----------------QLQKWIHGNVSKCANSMFIFD 147
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
E+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G +
Sbjct: 148 EMDKLHPGIIDAIKPFLDYYEQVDGVSYRRAIFIFLSNAGGDIITRTALDFWRAGRK 204
>gi|195059683|ref|XP_001995682.1| GH17629 [Drosophila grimshawi]
gi|193896468|gb|EDV95334.1| GH17629 [Drosophila grimshawi]
Length = 278
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L L + GQ + H+ AL H ++ + K+L +S HG PGTGK++V D I ++
Sbjct: 4 LHHSLSTTLFGQHMVSQHVLPALVAHLKSNSPSRKSLVMSFHGTPGTGKSFVADQIAEAL 63
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y + S+F HK+ R F + V Y+ ++ + ++ C R++FIFDEVDK P
Sbjct: 64 ---YLEGTKSKFFHKYFGRADFAHPARVHEYKERINKEVRESIRDCPRSLFIFDEVDKMP 120
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
G+ D + +D+ I + IF+FLSN+ G I + +L K G R
Sbjct: 121 IGVFDTLTSLVDYAGNGGDIDYTKAIFIFLSNTAGIRISDHLADLMKKGTR 171
>gi|432960950|ref|XP_004086508.1| PREDICTED: torsin-2A-like [Oryzias latipes]
Length = 311
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 8/219 (3%)
Query: 28 LSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAI 87
L+ + I +++ + K F ++C F N+R LE + ++V GQ L
Sbjct: 2 LAALCILVLLSFCPALCVFQKLYCSFS--DSCDCDF--RPNIRDLEWDIYKNVFGQHLVQ 57
Query: 88 SHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKF 147
+ + QN+ + + L +S HG GTGK V+ + + +F +S +VH+F
Sbjct: 58 DIVSEEVVKFLQNK-NPDRPLVLSFHGSSGTGKTLVSSMLGTHLFA---SAMSSPYVHQF 113
Query: 148 NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAV 207
+ +HFP + V YR +L +W+ N+T C +IFIFDE+++ P GL+DV+ PF+ V
Sbjct: 114 VATLHFPVPHRVQQYRRELKSWVQGNLTECAHSIFIFDEMERMPAGLVDVLEPFLGPSHV 173
Query: 208 YNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITI 246
+++ +++F+S++G I LE R+SG+ I
Sbjct: 174 VFYTNYRKAVYVFISSTGEEVINRAALENRQSGQEREAI 212
>gi|345802903|ref|XP_547446.3| PREDICTED: torsin-3A [Canis lupus familiaris]
Length = 601
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ LA + A+K + + + KALA+S HG GTGKN+V
Sbjct: 324 SNNFTGLESDLSIRLHGQHLARELVLTAVKGYLELPRPD-KALALSFHGWSGTGKNFVAR 382
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 383 LLAENL---YRDGQRSDCVKMFIATFHFPHPKYVDLYKEQLTTQIKKTQERCHQTLFIFD 439
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A N + + TIFLFLSN GG + L L ++G
Sbjct: 440 EAEKLHPGLLEVLRPHLERQAPENHRAKSRKTIFLFLSNLGGNIVNEAVLNLLQAG 495
>gi|432856699|ref|XP_004068494.1| PREDICTED: torsin-1A-like [Oryzias latipes]
Length = 272
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L + L +HGQ L S + A++ F N + K L +S HG GTGKN+V I ++
Sbjct: 3 LAKDLHTKLHGQHLVQSVVLKAIQG-FVNHPESNKPLTLSFHGWSGTGKNFVARIIAENL 61
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+D S V F + HFP+ V Y+ QL I V C + +FIFDE +K
Sbjct: 62 ---YRDGVKSECVRLFIAPFHFPHARLVDTYKGQLREAIRDMVLRCPQTLFIFDEAEKLH 118
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
G +D I P++DH+ + ++++ IFLFLSN GG I + L+ SG+
Sbjct: 119 PGFIDAIKPYMDHYDNVDGVTYRRAIFLFLSNIGGAAINDVALDFWHSGQ 168
>gi|357617375|gb|EHJ70752.1| putative Torsin family protein [Danaus plexippus]
Length = 346
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 8/187 (4%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELA--ISHICGALKNHFQNRYH-NTKALAISLH 113
E C D ++ + ++ LE+ LK + GQ L + I A K +++ N KAL +SLH
Sbjct: 50 ECCNDNYV-NFDIEKLEQSLKNQLFGQPLVNELPKILKAHKESLKDKTQKNKKALVLSLH 108
Query: 114 GLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISN 173
G G GKNY T FI +IFK+ S+FV F + F N R +L N + +
Sbjct: 109 GWSGVGKNYATTFIAEAIFKK---GMKSQFVKVFMGKKDFDCSNLQESQR-KLINEVNNI 164
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 233
V C ++ IFDE+ + +LD I P +DHH + + ++N IF+F+SN GG EI +
Sbjct: 165 VKKCSTSLIIFDEIHEMCPTILDSIKPMLDHHHEVDGVDYRNAIFIFISNIGGKEIATSL 224
Query: 234 LELRKSG 240
L+L G
Sbjct: 225 LDLYSQG 231
>gi|395530887|ref|XP_003767518.1| PREDICTED: torsin-3A [Sarcophilus harrisii]
Length = 536
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N+ LE L +HGQ L + +++ F + K L +S +G GTGKN+VT +
Sbjct: 263 NITGLEIDLSTRLHGQHLVQEVVLKSIRG-FLSMPQPEKPLVLSFNGWSGTGKNFVTRML 321
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+ Y+D S V F S +HFP+ +V +Y+ +L + V C +A+F+FDE
Sbjct: 322 ADQL---YRDGLESECVQVFISMLHFPHLKYVDVYKEKLMEQVSDTVQRCGQALFVFDEA 378
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+K P LL+ + P +DH+ ++ ++ IF+FLSN GG I L K+G
Sbjct: 379 EKLPPNLLETLKPILDHYDTIKEVDYRRAIFIFLSNFGGNTINEVVLSWLKAG 431
>gi|326924760|ref|XP_003208593.1| PREDICTED: torsin-3A-like [Meleagris gallopavo]
Length = 563
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
NV LE +H+HGQ LA + AL+ Q+ KAL +S HG GTGKN+V +
Sbjct: 290 NVTGLELDFHEHLHGQHLAKEIVIRALQGFLQSP-QPQKALVLSFHGWSGTGKNFVARMV 348
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
+ + Y+D S V F + HFP+ +V Y++QL I V C +++FIFDE
Sbjct: 349 AAHL---YRDGLKSECVRVFIALFHFPHYKYVDSYKVQLEKQISETVQLCKQSLFIFDEA 405
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+K GLLDVI PF + Q + +IFLFLSN GG+ I L+ ++G
Sbjct: 406 EKLHFGLLDVIKPFTA-RSDKGQQDNRRSIFLFLSNIGGSAINEVALDFWRAG 457
>gi|301761632|ref|XP_002916243.1| PREDICTED: torsin-3A-like [Ailuropoda melanoleuca]
Length = 321
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 57 EACTDKFIQSSNVRV------LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAI 110
+AC D S + R+ LE L +HGQ LA + ++ + + + KALA+
Sbjct: 33 QACCD----SGDCRISNNFTGLESDLSVQLHGQHLARELVLMTVRGYLELPRPD-KALAL 87
Query: 111 SLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI 170
S HG GTGKN+V + ++ Y+D S V F + +HFP+ +V LY+ +LT+ I
Sbjct: 88 SFHGWSGTGKNFVARLLAENL---YRDGLRSDCVKTFIATLHFPHLKYVDLYKEKLTSQI 144
Query: 171 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEI 229
C + +FIFDE +K GLL+ + P ++ A N ++ TIFLFLSN GG I
Sbjct: 145 KETQKRCRQTLFIFDEAEKLHPGLLEALRPHLERQAPENHRVESPKTIFLFLSNLGGNTI 204
Query: 230 MNTFLELRKSG 240
L L ++G
Sbjct: 205 NEAVLRLLQAG 215
>gi|281351290|gb|EFB26874.1| hypothetical protein PANDA_004302 [Ailuropoda melanoleuca]
Length = 310
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 57 EACTD--KFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
+AC D S+N LE L +HGQ LA + ++ + + + KALA+S HG
Sbjct: 23 QACCDSGDCRISNNFTGLESDLSVQLHGQHLARELVLMTVRGYLELPRPD-KALALSFHG 81
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGKN+V + ++ Y+D S V F + +HFP+ +V LY+ +LT+ I
Sbjct: 82 WSGTGKNFVARLLAENL---YRDGLRSDCVKTFIATLHFPHLKYVDLYKEKLTSQIKETQ 138
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTF 233
C + +FIFDE +K GLL+ + P ++ A N ++ TIFLFLSN GG I
Sbjct: 139 KRCRQTLFIFDEAEKLHPGLLEALRPHLERQAPENHRVESPKTIFLFLSNLGGNTINEAV 198
Query: 234 LELRKSG 240
L L ++G
Sbjct: 199 LRLLQAG 205
>gi|221109350|ref|XP_002168862.1| PREDICTED: torsin-1B-like, partial [Hydra magnipapillata]
Length = 275
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C + +++ + ++ L+EQLK + GQ L + + +H +N + + L +S HG
Sbjct: 5 SECCNNLWVRQNPLK-LKEQLKSKLFGQHLVEDLVIKPINDHIENN-NPSSPLVMSFHGW 62
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
G+GKN+ + I +S+FK+ + S+FVH + FP++ ++ Y+ +L+ I N
Sbjct: 63 TGSGKNFASQIIANSLFKKGMN---SKFVHIKVATKDFPHKKMLTEYKNELSKHIEKNAR 119
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 233
C+R +FIFDE + P+GL + I P++D++ + I ++ IF+FLSNS G EI+N +
Sbjct: 120 LCERTLFIFDEFHEMPEGLGNTIAPYLDYNVQLDGIDYRKNIFIFLSNSVG-EIINNY 176
>gi|260828917|ref|XP_002609409.1| hypothetical protein BRAFLDRAFT_86511 [Branchiostoma floridae]
gi|229294765|gb|EEN65419.1| hypothetical protein BRAFLDRAFT_86511 [Branchiostoma floridae]
Length = 429
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
+++ L++ +K+H+HGQ L + + +H + +AL +S HG PG GK+YV
Sbjct: 146 KPDIQRLDKTIKRHLHGQPLVHDIVVRYVTDHVDTKSPE-RALVMSFHGPPGVGKSYVGG 204
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSL--YRLQLTNWIISNVTACDRAIFI 183
I S+F D S V + H+P+ + S+ Y+ +L I + +C R +FI
Sbjct: 205 MIAESLFL---DGLNSPCVRLNIATKHYPHHDSHSIKGYKDKLHRLIPEAIRSCPRTLFI 261
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
FDE DK P+ L+D I P++D V Q +F +FLFLSN+ I + F+ELRK G
Sbjct: 262 FDETDKMPESLIDAIKPYVDGSPVDGQ-NFNKAMFLFLSNTAAGTITDKFVELRKGG 317
>gi|332024093|gb|EGI64310.1| Torsin-like protein [Acromyrmex echinatior]
Length = 249
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 9/139 (6%)
Query: 110 ISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 169
+S HG PGTGKNYV I + YK+ S + H FN R FP + V Y+ +L
Sbjct: 1 MSFHGTPGTGKNYVVQMIAKAF---YKNGVQSNYFHFFNGRNDFPLQRKVDDYQEELYKI 57
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID----HHAVYNQIS-FQN-TIFLFLSN 223
I + + C+R++F+FDEVDK P+GLL+V++PF+D H + N S +QN IF+FLSN
Sbjct: 58 IFNGLQQCERSMFVFDEVDKMPEGLLNVLVPFLDYNNYHKSTKNSKSVYQNKAIFIFLSN 117
Query: 224 SGGTEIMNTFLELRKSGER 242
+G T+I+ L + G++
Sbjct: 118 TGSTKIVQHLKNLWEKGKK 136
>gi|77681454|ref|NP_001029352.1| torsin family 2, member A precursor [Danio rerio]
gi|66910481|gb|AAH97170.1| Torsin family 2, member A [Danio rerio]
Length = 310
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 103/174 (59%), Gaps = 6/174 (3%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
+++ LE L ++++GQ +A + A+ N QN + + L +S HG GTGK+ V+ I
Sbjct: 37 DIKGLEWDLYKNLYGQHMAQDIVSEAVVNFLQNE-NPDRPLVLSFHGSSGTGKSLVSSMI 95
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
I Y S ++H+F +HFP+ + V YR L + ++TAC R+IFIFDE+
Sbjct: 96 GRHI---YGTAMGSPYIHQFIPTLHFPSADRVLQYRSDLKRRVEKSLTACARSIFIFDEM 152
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF-LELRKSG 240
+K P G++DV+ P + + + Q +++ I++F+S S G EI+N LE R++G
Sbjct: 153 EKMPPGVIDVLEPHLGPYHILFQTNYRKAIYIFIS-SAGEEIVNRIALESRRAG 205
>gi|440901223|gb|ELR52204.1| Torsin-3A [Bos grunniens mutus]
Length = 402
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V + ++
Sbjct: 129 LEADLRVRLHGQHLARELVLMAVRGYLE-KPRPDKALALSFHGWSGTGKNFVARMLAENL 187
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE +K
Sbjct: 188 ---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDEAEKLH 244
Query: 192 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
GLL+ + P ++ A N + + TIFLFLSN GG I L L K+G+
Sbjct: 245 PGLLEALRPHLERQAPNNHRAESKRTIFLFLSNLGGNIINEVVLNLLKAGQ 295
>gi|390352787|ref|XP_782768.3| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 391
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 5/185 (2%)
Query: 57 EACTDKFIQSSNVRV-LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C + +I +N+ L+ L +++ GQ + + AL+ H N + K L +S HG
Sbjct: 82 ECCDEPWINVNNISSGLDNVLNENLFGQHIVKETVSAALQGHLLNP-NPPKPLVLSFHGR 140
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I SI YK+ +S++VH + F + + Y+ L N + ++
Sbjct: 141 TGTGKNFVSRMIAESI---YKEGLSSKYVHLKIADRDFRHTTKFAEYKESLHNEVFNSAK 197
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
C R +FIFDEV+ P GLLD I PF+++ + + F IF+FLSN+ EI L
Sbjct: 198 NCPRQLFIFDEVENMPPGLLDTIRPFLEYRSHLEGVQFNKAIFIFLSNTAAREISEYALS 257
Query: 236 LRKSG 240
++G
Sbjct: 258 HMQAG 262
>gi|426239956|ref|XP_004013882.1| PREDICTED: torsin-3A [Ovis aries]
Length = 402
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V + ++
Sbjct: 129 LEADLRVRLHGQHLARELVLTAVRGYLEMPRPD-KALALSFHGWSGTGKNFVARMLAENL 187
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE +K
Sbjct: 188 ---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDEAEKLH 244
Query: 192 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
GLL+ + P ++ A N + + TIFLFLSN GG I L L K+G+
Sbjct: 245 PGLLEALRPHLERQAPSNRRAESKRTIFLFLSNLGGNIINEVVLNLLKAGQ 295
>gi|122692331|ref|NP_001073845.1| torsin-3A precursor [Bos taurus]
gi|119224063|gb|AAI26734.1| Torsin family 3, member A [Bos taurus]
gi|296479036|tpg|DAA21151.1| TPA: torsin family 3, member A [Bos taurus]
Length = 402
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ L+ +HGQ LA + A++++ + + KALA+S HG GTGKN+V + ++
Sbjct: 129 LKADLRVRLHGQHLARELVLTAVRDYLE-KPRPDKALALSFHGWSGTGKNFVARMLAENL 187
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE +K
Sbjct: 188 ---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDEAEKLH 244
Query: 192 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
GLL+ + P ++ A N + + TIFLFLSN GG I L L K+G+
Sbjct: 245 PGLLEALRPHLERQAPNNHRAESKRTIFLFLSNLGGNIINEVVLNLLKAGQ 295
>gi|47227661|emb|CAG09658.1| unnamed protein product [Tetraodon nigroviridis]
Length = 292
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
++C F N++ LE L ++++GQ L + + QN+ + + L +S HG
Sbjct: 10 DSCNCDF--KPNIQDLEWDLYKNLYGQHLVQDIVSEEVAKFLQNK-NPDRPLVLSFHGPS 66
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK V+ + + + Y +S VH+F +HFP+ + V Y+ L +W+ N+T
Sbjct: 67 GTGKTLVSQMLGNHL---YGSAMSSPHVHQFVPTLHFPSTDRVKEYKEDLKSWVQGNLTK 123
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
C R+IF FDE++K P GL+DV+ PF+ V +++ I++F+ +G I LE
Sbjct: 124 CARSIFFFDEMEKMPPGLIDVLEPFLGPSHVMFGTNYRKAIYVFIGTTGEEVITRVALEN 183
Query: 237 RKSG 240
R++G
Sbjct: 184 RQAG 187
>gi|410922511|ref|XP_003974726.1| PREDICTED: torsin-2A-like [Takifugu rubripes]
Length = 311
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
++C F N++ LE L ++++GQ L + + QN+ + + L +S +G
Sbjct: 28 ADSCNCDF--KPNIKGLEWDLYRNLYGQHLVQDIVSEEVAKFLQNK-NPDRPLVLSFNGP 84
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK V+ + + + Y +S +VH+F +HFP + V YR L +W+ N+T
Sbjct: 85 SGTGKTLVSSMLGNHL---YGSAMSSPYVHQFVPTLHFPLPDRVKQYREDLKSWVQGNLT 141
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
C R++F FDE++K P G++DV+ PF+ V + +++ I++F+ +G I LE
Sbjct: 142 ECARSVFFFDEMEKMPPGVVDVLEPFLGPSHVVFRTNYRKAIYVFIGTTGEEVITRVALE 201
Query: 236 LRKSGE 241
R++G
Sbjct: 202 NRQAGR 207
>gi|432116011|gb|ELK37150.1| Torsin-3A [Myotis davidii]
Length = 408
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N L+ L +HGQ LA + +K++ + + KALA+S HG GTGKN+V
Sbjct: 131 SNNFTGLQSDLSVRLHGQHLAQELVLTTVKSYLELPRPD-KALALSFHGWSGTGKNFVAR 189
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + IHFP+ +V LY+ QLT + C + +FIFD
Sbjct: 190 LLAENL---YRDGLRSDCVKVFITMIHFPHPQYVDLYKEQLTEQVRKTQEHCHQTLFIFD 246
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+ + P ++ + N + TIFLFLSN GG I L L K+G
Sbjct: 247 EAEKLHPGLLEALGPHLERQVLENHRAESSRTIFLFLSNLGGNVINEVVLGLLKAG 302
>gi|449690971|ref|XP_002164488.2| PREDICTED: torsin-1A-like, partial [Hydra magnipapillata]
Length = 345
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C + +++ S + L++QL + GQ L + + +H +N + + L +S HG
Sbjct: 62 SECCNNLWVRQSPI-YLKKQLNSKLFGQHLVEDLVVKPINDHIENN-NPSSPLVMSFHGW 119
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
G+GKN+V+ I +S+FK+ + S+FVH + FP++ ++ Y+ +L+ I N
Sbjct: 120 TGSGKNFVSQIIANSLFKKGMN---SKFVHIKVAAKDFPHKKLLTEYKNELSKHIEKNAR 176
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 233
C+R +FIFDE + P+GL + I P++D++ + I ++ IF+FLSNS G EI+N +
Sbjct: 177 LCERTLFIFDEFHEMPEGLGNTIAPYLDYNVQLDGIDYRKNIFIFLSNSVG-EIINNY 233
>gi|344278493|ref|XP_003411028.1| PREDICTED: torsin-3A-like [Loxodonta africana]
Length = 533
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ LA + A++++ + KALA+S HG GTGKN+V
Sbjct: 256 SNNFTGLESDLSVRLHGQHLAQELVLRAVRSYIET-PQPGKALALSFHGWSGTGKNFVAR 314
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ +V LY+ QL++ I C + +FIFD
Sbjct: 315 MLAENL---YRDGLRSDCVQVFIAMFHFPHPKYVDLYKEQLSSQIQETQQRCHQTLFIFD 371
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+ + P ++ A + TIFLFLSN GG I L L K+G
Sbjct: 372 EAEKLHPGLLEALEPHLERRAPKGHRAKTPRTIFLFLSNLGGNIINEVVLNLLKAG 427
>gi|354490764|ref|XP_003507526.1| PREDICTED: torsin-3A-like [Cricetulus griseus]
Length = 425
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N LE L+ +HGQ LA + A++ + + + KA
Sbjct: 134 RFQDCCTGGRHCRI----SNNFTGLESDLRVRLHGQHLASKLVPRAVRGYLEMPQVD-KA 188
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN+V + ++ Y+D S V F S HFP+ HV +Y+ +L
Sbjct: 189 LALSFHGWSGTGKNFVARMLAENL---YRDGMRSDCVKMFISTFHFPHTKHVDMYKEELR 245
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C +++FIFDE +K GLL+++ P ++ Q + IFLFLSN GG
Sbjct: 246 WQMQETWRRCHQSMFIFDEAEKLHPGLLELLGPHLEPRVPEAQDMEPPRPIFLFLSNLGG 305
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 306 SVISKEVLSLLKAG 319
>gi|156548696|ref|XP_001602655.1| PREDICTED: torsin-like protein-like isoform 1 [Nasonia vitripennis]
gi|345486835|ref|XP_003425565.1| PREDICTED: torsin-like protein-like isoform 2 [Nasonia vitripennis]
Length = 337
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C +K + N+ L+ + + GQ +A + + A+ +H + + K L +S HG
Sbjct: 34 ECCDNKRV-PYNLPKLKSMISMRLQGQHIAENVVLNAINSHVKK---SKKPLVMSFHGAN 89
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
G GK YV+ I + FK+ ++ SRF H + +FPN+ V Y+ QL + I + + +
Sbjct: 90 GVGKTYVSRMIAKAFFKKGEN---SRFFHFYYGLQNFPNKEKVLEYQTQLKSDIEAALHS 146
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
C+R++F+FD VD+ P LLD ++PFID ++ +IF+FL+N+G + I L
Sbjct: 147 CERSLFVFDGVDQMPSQLLDALMPFIDCPNCAGKLDKNKSIFIFLTNTGSSAIEKQLL 204
>gi|344239918|gb|EGV96021.1| Torsin-3A [Cricetulus griseus]
Length = 397
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N LE L+ +HGQ LA + A++ + + + KA
Sbjct: 106 RFQDCCTGGRHCRI----SNNFTGLESDLRVRLHGQHLASKLVPRAVRGYLEMPQVD-KA 160
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN+V + ++ Y+D S V F S HFP+ HV +Y+ +L
Sbjct: 161 LALSFHGWSGTGKNFVARMLAENL---YRDGMRSDCVKMFISTFHFPHTKHVDMYKEELR 217
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C +++FIFDE +K GLL+++ P ++ Q + IFLFLSN GG
Sbjct: 218 WQMQETWRRCHQSMFIFDEAEKLHPGLLELLGPHLEPRVPEAQDMEPPRPIFLFLSNLGG 277
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 278 SVISKEVLSLLKAG 291
>gi|256075662|ref|XP_002574136.1| torsin A [Schistosoma mansoni]
gi|360043438|emb|CCD78851.1| putative torsin A [Schistosoma mansoni]
Length = 296
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
N LE+ L +HGQ +A + L +H K LA+S HG G GKN+V++ I
Sbjct: 21 NKTSLEQSLSDELHGQHIAAERVYHHLVDHIAGG-SPQKPLALSFHGYTGVGKNFVSNII 79
Query: 128 VSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
V+++ + GT SRF H +++ IHF + + +S Y+ +L + + V+ C +IF+FDE
Sbjct: 80 VNNVLRL----GTRSRFYHFYDATIHFKHASRISEYKERLYQDLHTAVSECPTSIFVFDE 135
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
+ P G+LD++ P ++ + F+ +IF+FLSN+GG I
Sbjct: 136 MHNMPHGILDILSPLLEVRETVEGVDFRKSIFIFLSNAGGNYI 178
>gi|149636313|ref|XP_001515683.1| PREDICTED: torsin-3A-like [Ornithorhynchus anatinus]
Length = 397
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+N+ LE L +HGQ LA + A+++ F H KALA+S HG GTGKN+V
Sbjct: 122 NNITGLESDLSIRLHGQHLARHVVLKAVRD-FLALPHPEKALALSFHGWSGTGKNFVARM 180
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ ++ Y+D S V F S HFP+ +V LY+ QL I V C +A+F+FDE
Sbjct: 181 MADNL---YRDGLGSECVKVFISLFHFPHPRYVDLYQEQLKQHIGETVGRCRQALFVFDE 237
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG---TEIMNTFLELRKSGE 241
+K LLD + ++ H + + IFLFLSN GG E++ +FL++ + E
Sbjct: 238 AEKLHPSLLDTLKLYLHPHHSTKEQDCRRAIFLFLSNLGGNTINELVLSFLQMGQPRE 295
>gi|332219696|ref|XP_003258994.1| PREDICTED: torsin-3A [Nomascus leucogenys]
Length = 400
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 123 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 181
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V S+ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 182 MLVESL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLTGQIRGTQQLCRQTLFIFD 238
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 239 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 294
>gi|355746139|gb|EHH50764.1| hypothetical protein EGM_01639, partial [Macaca fascicularis]
Length = 309
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 33 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETSQPD-KALALSFHGWSGTGKNFVAR 91
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 92 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 148
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ F TIFLFLSN G I L+L K+G
Sbjct: 149 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKAG 204
>gi|355558986|gb|EHH15766.1| hypothetical protein EGK_01902, partial [Macaca mulatta]
Length = 403
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 126 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 184
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 185 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 241
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ F TIFLFLSN G I L+L K+G
Sbjct: 242 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKAG 297
>gi|380794437|gb|AFE69094.1| torsin-3A precursor, partial [Macaca mulatta]
Length = 375
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 98 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 156
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 157 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 213
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ F TIFLFLSN G I L+L K+G
Sbjct: 214 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKAG 269
>gi|388454480|ref|NP_001252599.1| torsin-3A precursor [Macaca mulatta]
gi|387542060|gb|AFJ71657.1| torsin-3A precursor [Macaca mulatta]
Length = 402
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 125 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 183
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 184 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 240
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ F TIFLFLSN G I L+L K+G
Sbjct: 241 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKAG 296
>gi|410985984|ref|XP_003999294.1| PREDICTED: uncharacterized protein LOC101084414 [Felis catus]
Length = 746
Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N+ L L +HGQ LA + A++ + + + KALA+S HG GTGKN+V
Sbjct: 469 SNNLTGLASDLSVRLHGQHLARELVLTAVRGYLEPPQPH-KALALSFHGWSGTGKNFVAR 527
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ +V LY+ QLT+ I C + +FIFD
Sbjct: 528 LLAENL---YRDGLRSDCVKVFIATFHFPHPKYVDLYQEQLTSQIRKTQERCPQTLFIFD 584
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+ + ++ A N ++ TIFLFLSN GG+ I L L +G
Sbjct: 585 EAEKLHPGLLEALRSHLEAQAPENHRVESPRTIFLFLSNLGGSVINEAVLNLLMAG 640
>gi|402857985|ref|XP_003893513.1| PREDICTED: torsin-3A [Papio anubis]
Length = 402
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 125 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 183
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 184 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 240
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ F TIFLFLSN G I L+L K+G
Sbjct: 241 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKAG 296
>gi|221112667|ref|XP_002158090.1| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 292
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C ++++Q+ ++ LE + V GQ L + A+ NH +N+ + L +S HG
Sbjct: 11 ECCNNQWLQTPSLSDLEHVINSEVFGQHLISKRVPAAIINHIENK-NPASPLVLSFHGGT 69
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 176
GTGK++V+ I +FK + S+FV + ++ N+N + Y+ QL+ I ++V
Sbjct: 70 GTGKSFVSQIIAEHLFK---NGVNSKFVRVIYATKNYTNKNMLEEYKNQLSKLIENSVKL 126
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 233
C+R +FI DE + P GL D I PF+D++ + + ++ +IF+FLSN+ +I+N +
Sbjct: 127 CERTLFIIDEFHEMPIGLGDSIAPFLDYNHQIDGVDYRKSIFIFLSNT-AEDIINNY 182
>gi|260824824|ref|XP_002607367.1| hypothetical protein BRAFLDRAFT_205107 [Branchiostoma floridae]
gi|229292714|gb|EEN63377.1| hypothetical protein BRAFLDRAFT_205107 [Branchiostoma floridae]
Length = 267
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S++++ L L + ++GQ L + A+++H + KALA+S HG G GK +VT
Sbjct: 2 SADLKTL---LTKRLYGQPLVRDVVIKAIQSHLTTPKPD-KALALSFHGSSGVGKTFVTT 57
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFP--NENHVSLYRLQLTNWIISNVTACDRAIFI 183
I SIF + S +VH +++ + F +E H Y+ QL + I + V C A+FI
Sbjct: 58 MIAKSIFTSGME---SPYVHYYSAEVDFKHTDEIHTREYKKQLRHDISTAVRRCQHAMFI 114
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELR 237
FD VD+ P+ L+D I PF++ + + I+F+ IF+ +S+S I+N ++LR
Sbjct: 115 FDHVDRMPRDLIDTIKPFLEEYTRVDGINFRKAIFILISHSASDAIINMTMKLR 168
>gi|297662628|ref|XP_002809799.1| PREDICTED: torsin-3A [Pongo abelii]
Length = 397
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMGQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++H A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLEHRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|335295791|ref|XP_003130388.2| PREDICTED: torsin-3A [Sus scrofa]
Length = 404
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L+ +HGQ LA + A++ + + KALA+S HG GTGKN++ + ++
Sbjct: 133 LEADLRVRLHGQHLARELVLAAVRGYLE-LPQPDKALALSFHGSSGTGKNFMARLLAENL 191
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S V F + +HFP+ +V Y+ QLT I C + +FI DE +K
Sbjct: 192 FR---DGLRSNCVQVFIATLHFPHPKYVDQYKEQLTGQIRKTQERCHQTLFILDEAEKLH 248
Query: 192 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
LL+V+ P +D + N + +IFLFLSN GG+ I L+L K G
Sbjct: 249 PELLEVLGPQLDRQTLENHRAKSPRSIFLFLSNLGGSVINEVVLDLLKGG 298
>gi|328701743|ref|XP_003241698.1| PREDICTED: torsin-like protein-like [Acyrthosiphon pisum]
Length = 341
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 13 YSIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEA------CTDKFIQS 66
Y ++CIS F L + I + + F+ G+ + C KF
Sbjct: 12 YFLLCISSF---LFFLKPTTVYGLIDPITVGVTAGAFMIGYLTDKVPYFNNDCPKKF--- 65
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
++ LE +K GQ +A + AL + N K + + G GTGKN+++D
Sbjct: 66 -EIKDLELDMKNSFFGQHIASKIVISALAGNLHRSKKNKKPIVMCFQGSSGTGKNFLSDL 124
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
I S +F K + + H N + FP ++ ++ Y+ +L + + S + +CD +F+FDE
Sbjct: 125 IASHMFNSTKSR--KKRYHVINGQTAFPLQSKINDYKEKLYSDVKSAIKSCDTNLFVFDE 182
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+ P G+LD++ P ++++ V I +N+IF+FL+N+G I+ +L+L +G
Sbjct: 183 IHYIPMGILDILGPILENNDV--SIDSRNSIFIFLTNTGYNPILQKYLDLWNNG 234
>gi|403266646|ref|XP_003925479.1| PREDICTED: torsin-3A [Saimiri boliviensis boliviensis]
Length = 495
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 218 SNNFTGLEWDLNVRLHGQHLVRQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 276
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 277 MLAENL---YRDGLRSDCVRMFIATIHFPHSKYVDLYKEQLKGQIRETQQLCHQTLFIFD 333
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K G
Sbjct: 334 EAEKLHPGLLEVLGPHLERRAPEDDRAESPWTIFLFLSNLRGDIINEVVLKLLKDG 389
>gi|296229692|ref|XP_002760440.1| PREDICTED: torsin-3A [Callithrix jacchus]
Length = 375
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 121 SNNFTGLEWDLNVRLHGQHLVQQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 179
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 180 MLAENL---YRDGLRSDCVRMFIATIHFPHPKYVDLYKEQLKGQIREMQQLCYQTLFIFD 236
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K G
Sbjct: 237 EAEKLHPGLLEVLGPPLERRAPEDDRADSPWTIFLFLSNLRGDRINEVVLKLLKDG 292
>gi|328701741|ref|XP_001946113.2| PREDICTED: torsin-like protein-like [Acyrthosiphon pisum]
Length = 339
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 104/188 (55%), Gaps = 11/188 (5%)
Query: 53 FGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL 112
FGG C F ++ LE +K+ GQ +A + AL + +N K L +S
Sbjct: 54 FGG---CPKTF----EIKDLEHDMKKSFFGQHIASKIVVSALAGNLHRSRNNKKPLVMSF 106
Query: 113 HGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIIS 172
HG G+GKN+++D I +F K K R+ H + R FP ++ ++ Y+ +L + + S
Sbjct: 107 HGSTGSGKNFLSDLIAKHMFNSEKVKEL-RY-HVIHGRSKFPLQSKINDYKEKLYSDVKS 164
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ +C +F+FDE+ P G+LD++ P ++++ V + +N+IF+FL+N+G I+
Sbjct: 165 AIKSCATNLFVFDEIHYIPMGILDILTPILENNDV--SVDSRNSIFIFLTNTGSDSIIKK 222
Query: 233 FLELRKSG 240
+L+L +G
Sbjct: 223 YLDLWVNG 230
>gi|403265630|ref|XP_003925027.1| PREDICTED: torsin-3A-like [Saimiri boliviensis boliviensis]
Length = 400
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 123 SNNFTGLEWDLNVRLHGQHLVRQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 181
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 182 MLAENL---YRDGLRSDCVRMFIATIHFPHSKYVDLYKEQLKGQIRETQQLCHQTLFIFD 238
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K G
Sbjct: 239 EAEKLHPGLLEVLGPHLERRAPEDDRAESPWTIFLFLSNLRGDIINEVVLKLLKDG 294
>gi|194210338|ref|XP_001494497.2| PREDICTED: torsin-3A-like [Equus caballus]
Length = 559
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 5/177 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N L+ L +HGQ LA + ++ + + KAL +S HG GTGKN+V
Sbjct: 282 SNNFTGLKSDLSVRLHGQHLAQELVLRTVRGYLEL-PRPEKALVLSFHGWSGTGKNFVAR 340
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ V LY+ QLT I C + +FIFD
Sbjct: 341 MLAENL---YRDGLRSDCVKVFIAMFHFPHPTSVDLYKEQLTGQIRKTQERCHQTLFIFD 397
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
E +K GLL+ + P + A N + +IFLFLSN GG+ I L L K+G
Sbjct: 398 EAEKLHPGLLEALRPHLGRQAPENHRAQSPRSIFLFLSNLGGSVINEVVLRLLKAGR 454
>gi|313231642|emb|CBY08755.1| unnamed protein product [Oikopleura dioica]
gi|313246883|emb|CBY35738.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 115
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNSRWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GKNY+T + +S+F +GT S F+H S +HF +++++ + QL +WI N
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKTHISQLQSWIEGNS 156
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
T C +F+FDE +FP GL D ++ F+ H + + +IF+FL G I++
Sbjct: 157 TICGEHLFVFDEARRFPSGLFDGLLHFMAHGSPAAK-RLGRSIFVFLY-EGDEPIVDWAQ 214
Query: 235 ELRKSGERYITI 246
+L ++GE TI
Sbjct: 215 DLYENGEDRETI 226
>gi|355725652|gb|AES08626.1| torsin family 3, member A [Mustela putorius furo]
Length = 342
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 13/214 (6%)
Query: 34 AAGIAYFSPSIINSKFLN----GFGGGEACT---DKFIQSSNVRVLEEQLKQHVHGQELA 86
AG+ +S ++ ++L+ + +AC D I S+N LE L +HGQ LA
Sbjct: 27 GAGLLGWSLPLLGQQYLDILTSWYCSFQACCNSGDCRI-SNNFTGLESDLSVRLHGQHLA 85
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
+ +K + + KALA+S HG GTGKN+V + ++ Y+D S V
Sbjct: 86 RELVLTTVKGYLEVP-QPGKALALSFHGWSGTGKNFVARLLAENL---YRDGLRSNCVKT 141
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
F + +HFP+ ++ LY +LT+ I C + +FIFDE +K GLL+ + P +
Sbjct: 142 FIATLHFPHPKYMDLYEEKLTSEIKETQEHCHQTLFIFDEAEKLHPGLLEALGPHLAQQT 201
Query: 207 VYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
N ++ TIFLFLSN GG I L L ++
Sbjct: 202 PKNHRVESPKTIFLFLSNLGGNTINAAVLNLLQA 235
>gi|426332882|ref|XP_004028021.1| PREDICTED: torsin-3A isoform 1 [Gorilla gorilla gorilla]
Length = 397
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|10438692|dbj|BAB15312.1| unnamed protein product [Homo sapiens]
gi|12654511|gb|AAH01085.1| Torsin family 3, member A [Homo sapiens]
gi|14043167|gb|AAH07571.1| Torsin family 3, member A [Homo sapiens]
gi|15079904|gb|AAH11746.1| Torsin family 3, member A [Homo sapiens]
gi|48146825|emb|CAG33635.1| TOR3A [Homo sapiens]
gi|119611444|gb|EAW91038.1| torsin family 3, member A, isoform CRA_b [Homo sapiens]
gi|119611445|gb|EAW91039.1| torsin family 3, member A, isoform CRA_b [Homo sapiens]
Length = 397
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|115647957|ref|NP_071766.2| torsin-3A precursor [Homo sapiens]
gi|74752636|sp|Q9H497.1|TOR3A_HUMAN RecName: Full=Torsin-3A; AltName: Full=ATP-dependent
interferon-responsive protein; AltName: Full=Torsin
family 3 member A; Flags: Precursor
gi|10862826|emb|CAC13973.1| ADIR1 [Homo sapiens]
gi|17921998|emb|CAC88129.1| ADIR1 [Homo sapiens]
Length = 397
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|114568181|ref|XP_514028.2| PREDICTED: torsin-3A isoform 4 [Pan troglodytes]
gi|410288304|gb|JAA22752.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|397508629|ref|XP_003824752.1| PREDICTED: torsin-3A [Pan paniscus]
Length = 403
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 126 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 184
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 185 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 241
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 242 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 297
>gi|17921999|emb|CAC88130.1| ADIR2 [Homo sapiens]
Length = 336
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|426332884|ref|XP_004028022.1| PREDICTED: torsin-3A isoform 2 [Gorilla gorilla gorilla]
Length = 336
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|410247796|gb|JAA11865.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ T+FLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTVFLFLSNLRGDIINEVVLKLLKAG 291
>gi|11061449|emb|CAC14461.1| ADIR2 [Homo sapiens]
Length = 336
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|119611443|gb|EAW91037.1| torsin family 3, member A, isoform CRA_a [Homo sapiens]
Length = 336
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>gi|313222418|emb|CBY39342.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 115
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNARWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GKNY+T + +S+F +GT S F+H S +HF +++++ ++ +L +WI N
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKVHISKLQSWIEGNS 156
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
T C +F+FDE +FP GL D ++ F+ H + + +IF+FL G I++
Sbjct: 157 TICGEHLFVFDEARRFPSGLFDGLLHFMAHGSPAAK-RLGRSIFVFLY-EGDEPIVDWAQ 214
Query: 235 ELRKSGERYITI 246
+L ++GE TI
Sbjct: 215 DLYENGEDRETI 226
>gi|431915974|gb|ELK16228.1| Torsin-3A [Pteropus alecto]
Length = 435
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL 108
F + GGG+ ++N LE L+ +HGQ LA + ++++ + + KAL
Sbjct: 146 FQDCCGGGDCRI-----TNNFTGLESDLRVCLHGQHLAQELVLTTVRSYLELPRPD-KAL 199
Query: 109 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN 168
A+S HG GTGKN+V + ++ Y+D S V F + +HFP+ + LY+ LT+
Sbjct: 200 ALSFHGWSGTGKNFVARMLAENL---YRDGLRSDCVKLFITTLHFPHSKDLDLYKEWLTD 256
Query: 169 WIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGT 227
+ C + +F+FDE +K GLL+ + P ++ A N + TIFLFLSN GG+
Sbjct: 257 QMRETQEHCHQTLFVFDEAEKLHPGLLEALGPHLELQAPDNLRAEPPRTIFLFLSNLGGS 316
Query: 228 EIMNTFLELRKSG 240
I L L ++G
Sbjct: 317 VINEVVLRLLEAG 329
>gi|410216688|gb|JAA05563.1| torsin family 3, member A [Pan troglodytes]
gi|410330083|gb|JAA33988.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ T+FLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTVFLFLSNLRGDIINEVVLKLIKAG 291
>gi|193786330|dbj|BAG51613.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 69/96 (71%)
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++
Sbjct: 101 FVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYD 160
Query: 207 VYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+ + +S+Q +F+FLSN+G I + L+ +SG++
Sbjct: 161 LVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQ 196
>gi|444730478|gb|ELW70860.1| Torsin-3A, partial [Tupaia chinensis]
Length = 375
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ LA + ++ + + +ALA+S HG GTGKN++
Sbjct: 34 SNNFAGLESDLSVRLHGQHLARELVLRTVRGYLETPL-PARALALSFHGWSGTGKNFMAR 92
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ +V LY+ +L I C + +FIFD
Sbjct: 93 MLAENL---YRDGLRSDCVKMFIATFHFPHPKYVDLYQERLAAQIQETRQRCHQTLFIFD 149
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ ++ + Q TIFLFLSN GG I L L K+G
Sbjct: 150 EAEKLHPGLLEVLGAHLERQVPKSHQTKASRTIFLFLSNLGGNAINEVVLNLLKAG 205
>gi|17390689|gb|AAH18292.1| Torsin family 3, member A [Homo sapiens]
gi|312151316|gb|ADQ32170.1| torsin family 3, member A [synthetic construct]
Length = 397
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLF SN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFPSNLRGDIINEVVLKLLKAG 291
>gi|348578439|ref|XP_003474990.1| PREDICTED: torsin-3A-like [Cavia porcellus]
Length = 433
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S++ L+ L +HGQ LA + ++ + + + KALA+S HG GTGKN+V
Sbjct: 156 SNDFSGLDSDLSVRLHGQHLARELVFRTVRGYLEMPQPD-KALALSFHGWSGTGKNFVAR 214
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + IHFP+ +V LY+ LT+ I C +++FIFD
Sbjct: 215 MVAENL---YRDGLKSDCVKVFITTIHFPHSKYVDLYKELLTDQIKQVQQRCHQSLFIFD 271
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K LL+++ P ++ A+ + IFLFLSN GG I L L K+G
Sbjct: 272 EAEKLHPELLELLGPHLERQALEGHRTKSPRAIFLFLSNLGGNVINKVVLNLLKAG 327
>gi|60551279|gb|AAH91041.1| MGC107954 protein [Xenopus (Silurana) tropicalis]
Length = 295
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
++N+ L L + +HGQ +A I L+ Q+ K LA+S HG GTGKN
Sbjct: 23 TNNLTGLRWDLGRRLHGQHVAEGLILTYLERFLQH-GEPLKPLALSFHGWTGTGKNLAAR 81
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
I ++ Y D SR + F ++HFP+ +HV Y++QL N I + C + +F+FD
Sbjct: 82 IIAENL---YLDSQRSRCIRVFIPQLHFPHLSHVEAYKVQLENQIREVSSRCPQPLFVFD 138
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYIT 245
E DK PKGLL I F+ + S ++IFLFLS+ G I L +G +
Sbjct: 139 EADKIPKGLLSSIRLFLSS----GKQSQSHSIFLFLSSMGSNAINELALSFWAAGRQRKE 194
Query: 246 I 246
I
Sbjct: 195 I 195
>gi|291397288|ref|XP_002715083.1| PREDICTED: torsin A-like [Oryctolagus cuniculus]
Length = 277
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ L +HGQ LA + +K + + + KALA+S HG GTGKN+V + ++
Sbjct: 6 LDSDLSGRLHGQHLARELVLRTVKGYLEVPRPD-KALALSFHGWSGTGKNFVARMLAENL 64
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
Y+D S V + IHFP+ +V LY+ QL I C + +FIFDE +K
Sbjct: 65 ---YRDGQRSACVRMLIATIHFPHPKYVDLYKEQLMAQIRETQQRCRQTLFIFDEAEKLH 121
Query: 192 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
LL+++ P ++ A + + +IF+FLSN GG I LE ++G
Sbjct: 122 PELLELLGPHLERRAPGDARAGPPRSIFVFLSNLGGNVINELVLEWLQAG 171
>gi|349732199|ref|NP_001025592.2| torsin-3A precursor [Xenopus (Silurana) tropicalis]
Length = 389
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
++N+ L L + +HGQ +A I L+ Q+ K LA+S HG GTGKN
Sbjct: 117 TNNLTGLRWDLGRRLHGQHVAEGLILTYLERFLQH-GEPLKPLALSFHGWTGTGKNLAAR 175
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
I ++ Y D SR + F ++HFP+ +HV Y++QL N I + C + +F+FD
Sbjct: 176 IIAENL---YLDSQRSRCIRVFIPQLHFPHLSHVEAYKVQLENQIREVSSRCPQPLFVFD 232
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYIT 245
E DK PKGLL I F+ + S ++IFLFLS+ G I L +G +
Sbjct: 233 EADKIPKGLLSSIRLFLSS----GKQSQSHSIFLFLSSMGSNAINELALSFWAAGRQRKE 288
Query: 246 I 246
I
Sbjct: 289 I 289
>gi|405968696|gb|EKC33742.1| Torsin-1A [Crassostrea gigas]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 103 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 162
+ +KAL +S HG GTGKNYV+ I SI YK+ S++VH ++ FP+++ V LY
Sbjct: 33 YPSKALTLSFHGGTGTGKNYVSKIIAESI---YKEGMRSKYVHLISATKEFPHKDMVPLY 89
Query: 163 RLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
+ +L N + S+V C +++FIFDE+DK P G+LD + P+ D +
Sbjct: 90 KDKLRNLVESSVNECPQSLFIFDEIDKMPAGILDTLKPYFDFY 132
>gi|41053623|ref|NP_957150.1| torsin A precursor [Danio rerio]
gi|38541235|gb|AAH62843.1| Zgc:77727 [Danio rerio]
Length = 328
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 64 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 123
+++ N L+ L Q + GQ + + A+ + F + K L +S HG GTGKN+V
Sbjct: 52 LRTFNPAGLKSDLGQALFGQHIVSDVVLKAVSS-FMADSNPNKPLVLSFHGTAGTGKNHV 110
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ I +++ + ++ S+ VH F PN Y + L +I ++V R+ FI
Sbjct: 111 SKIIARNLYTKGEN---SKHVHTFIYDNQDPNA-----YSVWLKQFIHTSVENFPRSTFI 162
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
FDE+DK ++DVI PF+D++A N +SF IF+FLSN+GG I + L+ + G +
Sbjct: 163 FDEMDKMQPQVIDVIKPFLDYNAHVNGVSFHKAIFIFLSNTGGKVIADLALDFWREGRK 221
>gi|351714590|gb|EHB17509.1| Torsin-3A, partial [Heterocephalus glaber]
Length = 384
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S++ L+ L +HGQ LA + + ++ + + + KALA+S HG GTGKN+V
Sbjct: 110 SNDFSGLDSDLSVRLHGQHLAQALVVRTVRGYLEMPQPD-KALALSFHGWSGTGKNFVAR 168
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ +L++ I C +++F+FD
Sbjct: 169 MLVENL---YQDGLKSDCVKVFIASFHFPHPKYVDLYK-RLSDQIQGTQQRCHQSLFMFD 224
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K LL+++ P ++ A ++ TIFLFLSN GG I L L K+G
Sbjct: 225 EAEKLHPELLELLGPHLERWAPEGHRTESPRTIFLFLSNLGGNVINEVVLNLLKAG 280
>gi|449682279|ref|XP_002159956.2| PREDICTED: torsin-1B-like [Hydra magnipapillata]
Length = 352
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 31/177 (17%)
Query: 55 GGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHG 114
E C D+++ ++ LE++L + V GQ LA I A+K+H +N+ + L +S HG
Sbjct: 92 NNECCNDQWL-IQDLSGLEKELNEKVFGQHLANKLISKAVKSHIKNKDPKS-PLVMSFHG 149
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
GTGK +V+ + +S+FK+ +L I N
Sbjct: 150 WTGTGKTFVSQIVANSLFKKD-----------------------------ELIELIQKNS 180
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 231
C R +F+FDE P+GL DV+ PF+D+HA + ++ IF+FLSN G I N
Sbjct: 181 EQCHRMLFVFDEFHFMPEGLSDVMTPFLDYHAAVDGRDYRKNIFIFLSNVAGDMINN 237
>gi|260811011|ref|XP_002600216.1| hypothetical protein BRAFLDRAFT_203955 [Branchiostoma floridae]
gi|229285502|gb|EEN56228.1| hypothetical protein BRAFLDRAFT_203955 [Branchiostoma floridae]
Length = 249
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
VL+ +++ +HGQ A + + +H ++ KA+ +S HG G GKNY++ I +
Sbjct: 12 VLDTTIQKKLHGQPFARKVVVDVITSHVKSS-DPRKAMVLSFHGPRGVGKNYLSTMIAQA 70
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFP--NENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
+ Y D TS V +++ HF + N+V Y L I S V C RA+ IFDE++
Sbjct: 71 L---YADGMTSSCVRGYSATRHFKHHDLNNVRNYMDMLHEEIPSLVRRCPRALIIFDEME 127
Query: 189 KFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELR--KSGER 242
K P L+D I PF++ + + ++ IF+ LSNS I L LR KS ER
Sbjct: 128 KMPGQLIDTIKPFVEESEAVDGVDYRKAIFILLSNSAQGLIEEQTLLLRRDKSLER 183
>gi|395825266|ref|XP_003785859.1| PREDICTED: torsin-3A [Otolemur garnettii]
Length = 402
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ LA + ++ + K LA+ HG GTGKN+V
Sbjct: 125 SNNFTGLESDLNVRLHGQHLARELVLRTVRGYLAMP-RPEKPLALLFHGWSGTGKNFVAR 183
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 184 MLAENL---YRDGLRSDCVRMFIAMFHFPHPKYVDLYKEQLTGQIQETQQLCPQTLFIFD 240
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K LL+V+ +++H ++ IFLFLSN G I L L KSG
Sbjct: 241 EAEKLHPELLEVLGQYLEHSVPEGHKAKPPRAIFLFLSNLRGNIINEVVLNLLKSG 296
>gi|292627322|ref|XP_001345255.3| PREDICTED: torsin-1A-like [Danio rerio]
Length = 263
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRV-----LEEQLKQHVHGQELAISHICGALKNHFQNRYH 103
FL F + F + ++ V LEE L + GQ +A + + ++ + +
Sbjct: 22 FLEVFTDAASAVYTFFEQDDLLVFDPKRLEEDLNDFLFGQHIASNVVLKSVSSFMTDSKP 81
Query: 104 NTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR 163
N K L +S HG GTGKN+VT + +I+K+ ++ S+ V ++ HFP + + LY
Sbjct: 82 N-KPLVLSFHGTTGTGKNHVTKILARNIYKKGEE---SKHVQIYDLEHHFPQRSKIDLYS 137
Query: 164 LQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH 204
QL WI NV++ R++FIFDE+++ L+DV+ PF+D+
Sbjct: 138 AQLKQWIHGNVSSFPRSMFIFDEMEEMQPELIDVLKPFLDY 178
>gi|74186394|dbj|BAE42964.1| unnamed protein product [Mus musculus]
Length = 385
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 94 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 148
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN+V ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 149 LALSFHGWSGTGKNFVARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 205
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 206 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 265
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 266 SVINEVVLSLLKAG 279
>gi|74213111|dbj|BAE41695.1| unnamed protein product [Mus musculus]
Length = 385
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 94 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 148
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN+V ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 149 LALSFHGWSGTGKNFVARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 205
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 206 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 265
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 266 SVINEVVLSLLKAG 279
>gi|339235107|ref|XP_003379108.1| torsin-1A [Trichinella spiralis]
gi|316978291|gb|EFV61298.1| torsin-1A [Trichinella spiralis]
Length = 291
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 22/141 (15%)
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
GKNYV+ FI SI+K Y K T FV F HFP+ V +Y+ QL WI NV+ C
Sbjct: 41 GKNYVSQFIAESIYK-YGMKST--FVRYFIGGYHFPDRKLVDVYKQQLREWIKGNVSTCQ 97
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDH------------------HAVYNQISFQNTIFLF 220
++FIFDEVD+ P G+LD I PF+++ H VY + + F
Sbjct: 98 YSLFIFDEVDRMPPGVLDAIKPFLEYTQMVDGVDFTKSSRCLVWHLVYRSLEYLLVWVKF 157
Query: 221 -LSNSGGTEIMNTFLELRKSG 240
SN GG++I ++ K G
Sbjct: 158 SYSNVGGSDIAKYVYDVWKQG 178
>gi|224809275|ref|NP_075630.2| torsin-3A precursor [Mus musculus]
gi|90101789|sp|Q9ER38.2|TOR3A_MOUSE RecName: Full=Torsin-3A; AltName: Full=ATP-dependent
interferon-responsive protein; AltName: Full=Torsin
family 3 member A; Flags: Precursor
gi|12841607|dbj|BAB25279.1| unnamed protein product [Mus musculus]
gi|12844645|dbj|BAB26443.1| unnamed protein product [Mus musculus]
gi|48734896|gb|AAH71216.1| Tor3a protein [Mus musculus]
gi|74214616|dbj|BAE31149.1| unnamed protein product [Mus musculus]
gi|74220137|dbj|BAE31256.1| unnamed protein product [Mus musculus]
Length = 385
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 94 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 148
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN++ ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 149 LALSFHGWSGTGKNFLARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 205
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 206 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 265
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 266 SVINEVVLSLLKAG 279
>gi|74212660|dbj|BAE31066.1| unnamed protein product [Mus musculus]
Length = 384
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 93 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 147
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN++ ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 148 LALSFHGWSGTGKNFLARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 204
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 205 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 264
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 265 SVINEVVLSLLKAG 278
>gi|74142399|dbj|BAE31955.1| unnamed protein product [Mus musculus]
gi|74181600|dbj|BAE30065.1| unnamed protein product [Mus musculus]
Length = 385
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 94 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 148
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN++ ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 149 LALSFHGWSGTGKNFLARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVGTYKEELQ 205
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 206 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 265
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 266 SVINEVVLSLLKAG 279
>gi|12857398|dbj|BAB30998.1| unnamed protein product [Mus musculus]
Length = 380
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 87 RFQDCCSGGGDCRI----SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 141
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN++ ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 142 LALSFHGWSGTGKNFLARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 198
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 199 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 258
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 259 SVINEVVLSLLKAG 272
>gi|57527353|ref|NP_001009683.1| torsin-3A precursor [Rattus norvegicus]
gi|81883141|sp|Q5M936.1|TOR3A_RAT RecName: Full=Torsin-3A; AltName: Full=Torsin family 3 member A;
Flags: Precursor
gi|56585058|gb|AAH87678.1| Torsin family 3, member A [Rattus norvegicus]
Length = 395
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 118 SNNFTGLESDLRVRLHGQHLASKLVLEAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 176
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F S HFP+ +V LY+ L + C ++ F+FD
Sbjct: 177 MLVDNL---YRDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFD 233
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+++ P+++ + IFL LSN GG+ I L L K+G
Sbjct: 234 EAEKLHPGLLELLEPYLEPRSPETHGAELPRAIFLLLSNLGGSVINEVVLGLLKAG 289
>gi|196016674|ref|XP_002118188.1| hypothetical protein TRIADDRAFT_33759 [Trichoplax adhaerens]
gi|190579237|gb|EDV19337.1| hypothetical protein TRIADDRAFT_33759 [Trichoplax adhaerens]
Length = 369
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 21 ITGEFFT--LSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQ 78
+ EFFT L G ++A Y +F A D I + L ++ KQ
Sbjct: 26 VNSEFFTAALVGWSVAIPFTYKVGEYAYCQFKECDNAEWAIHDPNIFKAK---LTKEWKQ 82
Query: 79 HVHGQELAISHICGALKNHFQ--NRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYK 136
HV GQ+LA+ I L +H ++ + KAL +S HG GTGK V + + YK
Sbjct: 83 HVFGQDLALKIIRNMLTSHLVRISKKTSKKALVLSFHGGVGTGKTLVAKLLAKVL---YK 139
Query: 137 DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLD 196
+ +S +V + + + N N + + +L I V +C R + +F+EVDK G++D
Sbjct: 140 NGLSSSYVRRIHLKDFLTNLN-MDGKKHKLKTEIKRFVQSCTRPLVLFEEVDKLEAGVID 198
Query: 197 VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
+ P+ D +V N +S+ NTIF+F SN EI
Sbjct: 199 ALSPYFDESSVDN-VSYANTIFIFTSNYASREI 230
>gi|10862867|emb|CAC13978.1| ADIR1 [Mus musculus]
Length = 385
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N+ LE L +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 108 SNNLTGLESDLCVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 166
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+++ P+++ + + + IFLFLSN GG+ I L L K+G
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKAG 279
>gi|390364077|ref|XP_781343.3| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 275
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 90 ICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG--TSRFVHKF 147
+ GA+ H N + K L +SLHG GTGKN+++ +V +++ + G T R
Sbjct: 3 VLGAIDGHVTNP-NPPKPLVLSLHGPAGTGKNHISRLVVENLYTNGMESGCVTVRM---- 57
Query: 148 NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAV 207
S + +P+ + + Y+ +L +I S V+ C +FIFDEV+ P GLLD + F+DHH
Sbjct: 58 -STMDYPHHDDIYHYKEKLVPFIKSKVSECHNHLFIFDEVENMPPGLLDSMRSFLDHHTK 116
Query: 208 YNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
+ + ++ I +F S I E + G
Sbjct: 117 VDGVDYRKVIVIFRSKLAAQAINKYMFESYEKG 149
>gi|444517775|gb|ELV11789.1| Torsin-1A [Tupaia chinensis]
Length = 194
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%)
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+
Sbjct: 12 QLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNA 71
Query: 225 GGTEIMNTFLELRKSGER 242
G I + L+ +SG++
Sbjct: 72 GAERITDVALDFWRSGKQ 89
>gi|74152778|dbj|BAE42653.1| unnamed protein product [Mus musculus]
Length = 230
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 159 VSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIF 218
+ L + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + IS++ IF
Sbjct: 45 LRLVQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGISYRRAIF 104
Query: 219 LFLSNSGGTEIMNTFLELRKSGERYITIH 247
+FLSN+GG I T L+ ++G + I
Sbjct: 105 IFLSNAGGDLITKTALDFWRAGRKREEIQ 133
>gi|148676548|gb|EDL08495.1| torsin family 1, member B, isoform CRA_a [Mus musculus]
Length = 185
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 161 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 220
L + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + IS++ IF+F
Sbjct: 2 LVQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIF 61
Query: 221 LSNSGGTEIMNTFLELRKSGERYITIH 247
LSN+GG I T L+ ++G + I
Sbjct: 62 LSNAGGDLITKTALDFWRAGRKREEIQ 88
>gi|431898900|gb|ELK07270.1| Torsin-1B [Pteropus alecto]
Length = 215
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+
Sbjct: 36 QLRRWIRGNVSACASSMFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNA 95
Query: 225 GGTEIMNTFLELRKSGER 242
GG I T LE ++G +
Sbjct: 96 GGDLITKTALEFWRAGRK 113
>gi|225712262|gb|ACO11977.1| Torsin-1B precursor [Lepeophtheirus salmonis]
Length = 209
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 151 IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ 210
IHFP + Y+ +L WI N+T C R++F+FDE+DK P ++D I PF+D H +
Sbjct: 11 IHFPIPSQNYEYKAKLQQWIKGNITICSRSVFVFDEIDKMPPHVIDGIKPFLDFHEDVDS 70
Query: 211 ISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
I + IF+F+SN+GG +I + G++
Sbjct: 71 IDCRKAIFIFISNTGGKKINEEVYKYLSEGKK 102
>gi|358414641|ref|XP_613495.5| PREDICTED: torsin-1B [Bos taurus]
Length = 204
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%)
Query: 161 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 220
L + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+F
Sbjct: 21 LVQDQLQRWIRGNVSACAGSVFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIF 80
Query: 221 LSNSGGTEIMNTFLELRKSGER 242
LSN+GG I T L+ ++G +
Sbjct: 81 LSNAGGDLITKTALDFWRAGRK 102
>gi|444517776|gb|ELV11790.1| Torsin-1B [Tupaia chinensis]
Length = 209
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 155 NENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQ 214
+E + + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++
Sbjct: 20 SETLLRTAKDQLQKWIRGNVSACASSLFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYR 79
Query: 215 NTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
IF+FLSN+GG I L+ ++G + I
Sbjct: 80 KAIFIFLSNAGGDLITKVALDFWRAGRKREDIQ 112
>gi|38383107|gb|AAH62340.1| TOR2A protein [Homo sapiens]
Length = 247
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
F N R L +W+ N+TAC R++F+FDE+DK P GL++V+ PF+ V +
Sbjct: 55 FANATSGPTCRKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTN 114
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKS 239
++ IF+F+SN+GG +I LE +S
Sbjct: 115 YRKAIFIFISNTGGEQINQVALEAWRS 141
>gi|426332886|ref|XP_004028023.1| PREDICTED: torsin-3A isoform 3 [Gorilla gorilla gorilla]
Length = 350
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC 177
TGKN+V +V ++ Y+D S V F + HFP+ +V LY+ QL + I C
Sbjct: 124 TGKNFVARMLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLC 180
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FIFDE +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L
Sbjct: 181 HQTLFIFDEAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKL 240
Query: 237 RKSG 240
K+G
Sbjct: 241 LKAG 244
>gi|255671995|gb|ACU26617.1| CG3024 [Drosophila simulans]
Length = 163
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C D+ I + V LE+ L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 53 ECCDDRSI-PARVHELEKSLERTLIGQHIVRQHIVPALKAHIASSDKSRKPLVISFHGQP 111
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ +++
Sbjct: 112 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVDSYKAKIS 159
>gi|449478098|ref|XP_002194186.2| PREDICTED: peptidyl-tRNA hydrolase-like [Taeniopygia guttata]
Length = 328
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 166 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSG 225
L WI N+T C R+ F+FDE+DK GL+DVIIPF+ V +++ IF+F+SN+G
Sbjct: 195 LKRWIQGNLTNCGRSAFLFDEMDKMHPGLIDVIIPFLGPSWVVYGTNYRKAIFIFISNAG 254
Query: 226 GTEIMNTFLELRKS 239
G +I N L L ++
Sbjct: 255 GEQINNVTLALWRA 268
>gi|147906933|ref|NP_001090348.1| torsin-4A-A [Xenopus laevis]
gi|123914278|sp|Q0IHC5.1|TO4AA_XENLA RecName: Full=Torsin-4A-A; AltName: Full=Torsin family 4 member A-A
gi|114107859|gb|AAI23215.1| MGC154455 protein [Xenopus laevis]
Length = 420
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ+ AI + L+++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQKRAIEKLMDHLQDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++ + K ++ + FV ++ + + PNEN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSIMDNDFVLQYYTMHNCPNENDVTQCQSEMSGLISEMISRAEIE 264
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+FIFDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDEVEVMPVALLDVLHRYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>gi|210111682|gb|ACJ07155.1| torsin 1B [Sus scrofa]
Length = 155
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 30 GIAIAAG---IAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
GIAI Y S + + +F E C ++ Q N + +L++ + GQ LA
Sbjct: 31 GIAIGTASVLTGYLSYTELFCRF------AECCREE--QPLNASAFKLELEERLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
+ AL F+N + KAL +SLHG GTGKN+V+ + ++ ++ S FVH
Sbjct: 83 TEVLLKALTG-FRNNKNPKKALTLSLHGWAGTGKNFVSQIVAENL---HRKGLKSNFVHL 138
Query: 147 FNSRIHFPNENHVSLYR 163
F S +HFP+E HV LY+
Sbjct: 139 FVSTLHFPHEQHVKLYQ 155
>gi|327290692|ref|XP_003230056.1| PREDICTED: torsin family protein C9orf167 homolog A-like [Anolis
carolinensis]
Length = 406
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+ +++ V GQ+LA+ + G LK++ HN K L IS HG G GK++V ++++
Sbjct: 148 LEKTMRREVFGQDLAVEGVMGLLKDYLATHIHN-KPLVISFHGPSGVGKSHV-GWLLAKH 205
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEV 187
F+ G +H F H P +L+L+ + VT + +FI DEV
Sbjct: 206 FRSI--MGHETVLHYFTQH-HCPEGVPAMSCQLELSKMVTEMVTQAEVEEKIPLFILDEV 262
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ P LL+ + F H N+ F N +++ +SN G E+ + L+
Sbjct: 263 ESMPPDLLETLGRFF-HTNQTNE--FLNAVYILISNLGAKEVTDVLLQ 307
>gi|260787437|ref|XP_002588759.1| hypothetical protein BRAFLDRAFT_125633 [Branchiostoma floridae]
gi|229273929|gb|EEN44770.1| hypothetical protein BRAFLDRAFT_125633 [Branchiostoma floridae]
Length = 465
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
++ LEE+L Q + GQ +A + A+ H H + L +S G G GK ++
Sbjct: 134 SISALEEELNQRLFGQHIAKRVVIEAMSGHLAG-THGSTPLVMSFVGPSGVGKTFL---- 188
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDE 186
S + R+ + VH+F HFP+ LYR Q+ +W+ NV+ DR +F+FDE
Sbjct: 189 -SRLLSRFLSQSCGVKVHEFIIPHHFPHPEEAQLYREQVRDWVQGNVSHSDRQHLFVFDE 247
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
++K L + + ++ + + NT+++F+
Sbjct: 248 MEKVYPDLAEGLQSLLEDNTL-------NTMYIFI 275
>gi|114627745|ref|XP_528518.2| PREDICTED: torsin-4A [Pan troglodytes]
gi|410217130|gb|JAA05784.1| chromosome 9 open reading frame 167 [Pan troglodytes]
gi|410250028|gb|JAA12981.1| chromosome 9 open reading frame 167 [Pan troglodytes]
gi|410331129|gb|JAA34511.1| chromosome 9 open reading frame 167 [Pan troglodytes]
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVAQAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI------- 229
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQN 314
Query: 230 MNTFLELRKSGER 242
+ L LR G R
Sbjct: 315 ASRALPLRPDGPR 327
>gi|426363738|ref|XP_004048991.1| PREDICTED: torsin-4A [Gorilla gorilla gorilla]
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVAQAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI------- 229
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQN 314
Query: 230 MNTFLELRKSGER 242
+ L LR G R
Sbjct: 315 ASRALPLRPDGSR 327
>gi|18606215|gb|AAH23085.1| Tor2a protein, partial [Mus musculus]
Length = 176
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
N+TAC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I
Sbjct: 4 NLTACGRSLFLFDEMDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQV 63
Query: 233 FLELRKS 239
LE +S
Sbjct: 64 ALEAWRS 70
>gi|390358220|ref|XP_796829.2| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 222
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
FP++ H+ Y+ +L + I S V++C +FIFDEV+ P GLLD I F+DHH
Sbjct: 15 FPHKAHLEKYKEELVSLIKSKVSSCPHHVFIFDEVENMPAGLLDNIKGFLDHHTKVEGTD 74
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKSG 240
++ IF+F SN I E + G
Sbjct: 75 YRKAIFIFRSNLAAQAINKYVWESYEKG 102
>gi|71896111|ref|NP_001025600.1| torsin-4A [Xenopus (Silurana) tropicalis]
gi|82178619|sp|Q5BKJ7.1|TOR4A_XENTR RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|60551288|gb|AAH91049.1| MGC108282 protein [Xenopus (Silurana) tropicalis]
Length = 420
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQRRAIDKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++ + K ++ + FV ++ + + P+EN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSVMDNDFVLQYYTMHNCPDENDVAKCQAEVSGMISEMISRAEIE 264
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+FIFDE++ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDELEVMPVALLDVLHGYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>gi|297685844|ref|XP_002820484.1| PREDICTED: torsin-4A [Pongo abelii]
Length = 422
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A++ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L ++ V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVVDVVARAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|431899056|gb|ELK07426.1| hypothetical protein PAL_GLEAN10012742 [Pteropus alecto]
Length = 478
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 202 DDNAQRYDLDGLEKALQRAVFGQSAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 260
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P R +L + V +
Sbjct: 261 SHVGRLLARH-FRAVLEDGAP--VLQYDARHHCPEPRSAEDCREELARRVADVVAQAEAE 317
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P LLD + F+ ++ F N I++ LS +GG EI L+
Sbjct: 318 EMTPLLVLDDVELMPPALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEITRFVLQ 373
>gi|351705286|gb|EHB08205.1| hypothetical protein GW7_03927 [Heterocephalus glaber]
Length = 415
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I L+++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V +++++ H P R +L + + V +
Sbjct: 201 SHVGRLLSRHFRAVLED---SALVLQYHAQHHCPEPRAAQGCREELARRVATVVAQAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH F N I++ LSN+GG E+
Sbjct: 258 EKTPLVVLDEAELLPPALLDELHGLLQPQRAHH-------FHNAIYVLLSNAGGAEVTRF 310
Query: 233 FLE 235
L+
Sbjct: 311 VLQ 313
>gi|116063568|ref|NP_060193.2| torsin-4A [Homo sapiens]
gi|147638588|sp|Q9NXH8.2|TOR4A_HUMAN RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
Length = 423
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|7020208|dbj|BAA91032.1| unnamed protein product [Homo sapiens]
Length = 423
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|31981884|ref|NP_666227.2| torsin-4A [Mus musculus]
gi|81896065|sp|Q8BH02.1|TOR4A_MOUSE RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|26335761|dbj|BAC31581.1| unnamed protein product [Mus musculus]
gi|26350075|dbj|BAC38677.1| unnamed protein product [Mus musculus]
gi|74143001|dbj|BAE42522.1| unnamed protein product [Mus musculus]
gi|74181873|dbj|BAE32638.1| unnamed protein product [Mus musculus]
gi|74207076|dbj|BAE33317.1| unnamed protein product [Mus musculus]
gi|148676260|gb|EDL08207.1| RIKEN cDNA A830007P12 [Mus musculus]
Length = 426
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 233 FLE 235
L+
Sbjct: 306 VLQ 308
>gi|395844196|ref|XP_003794848.1| PREDICTED: torsin-4A [Otolemur garnettii]
Length = 422
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ + ++++ H ++ L ++LHG G GK
Sbjct: 141 DDNAQRYDLDGLEKVLQRTVFGQPAAVGRVVALMRDYLATHVH-SRPLLLALHGPSGVGK 199
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P + R +L + V +
Sbjct: 200 SHVGRLLARHFRAVLED---SALVLQYHTRHHCPEQRATQDCREELARRVADVVARAEAE 256
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DEV+ P LLD + F+ ++ F N I++ LS +GG EI L+
Sbjct: 257 EKTPLLVLDEVELMPPALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEITRFVLQ 312
>gi|344308168|ref|XP_003422750.1| PREDICTED: torsin family protein C9orf167-like [Loxodonta africana]
Length = 419
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 139 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 197
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ D G V ++++R H P + V R +L + V +
Sbjct: 198 SHVGRLLARH-FRAVLDDGA--LVLQYHARHHCPEPSAVKACREELARRVADVVARAEAE 254
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DEV+ LLD + F+ + F + I++ LS++GG EI L+
Sbjct: 255 EKTPLLVLDEVEAMRPALLDEVHGFLQPQRSHQ---FHSAIYVLLSSTGGGEITRFVLQ 310
>gi|15341833|gb|AAH13092.1| A830007P12Rik protein [Mus musculus]
Length = 380
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 233 FLE 235
L+
Sbjct: 306 VLQ 308
>gi|157821971|ref|NP_001101286.1| torsin family 4, member A [Rattus norvegicus]
gi|149039416|gb|EDL93636.1| rCG45397 [Rattus norvegicus]
Length = 434
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVSRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARHHCPELRPVQDCRKELAQRVADVVAQAEAE 252
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 233 FLE 235
L+
Sbjct: 306 VLQ 308
>gi|296191261|ref|XP_002743543.1| PREDICTED: torsin-4A [Callithrix jacchus]
Length = 423
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P R +L + + V +
Sbjct: 201 SHVGRLLARH-FRAVLEDGA--LVLQYHARHHCPEARAARDCREELARRVANVVERAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI------- 229
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRPHH---FHNAIYVLLSGAGGAEVTRFVLQN 314
Query: 230 MNTFLELRKSGER 242
+ L LR G R
Sbjct: 315 ASRALPLRPDGAR 327
>gi|57092145|ref|XP_548350.1| PREDICTED: torsin family protein C9orf167 [Canis lupus familiaris]
Length = 424
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A++ I L+++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPEAVARIVALLRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++V + F+ + G V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARH-FRSVLEDGA--LVLQYHARHHCPEARAAQACREELAALVADVVARAEVE 257
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DE + P LLD + F+ + F N I++ LS GG EI L+
Sbjct: 258 EKTPLVVLDEAELMPPALLDELHGFLQPQRAH---PFHNAIYVLLSGVGGAEITRFVLQ 313
>gi|426363286|ref|XP_004048774.1| PREDICTED: torsin-1B isoform 1 [Gorilla gorilla gorilla]
Length = 159
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL----HPKGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLT 167
F S +HFP+E + LY+ L+
Sbjct: 138 LFVSTLHFPHEQKIKLYQSSLS 159
>gi|148231516|ref|NP_001089731.1| torsin-4A-B [Xenopus laevis]
gi|123900453|sp|Q3KQ18.1|TO4AB_XENLA RecName: Full=Torsin-4A-B; AltName: Full=Torsin family 4 member A-B
gi|76779557|gb|AAI06424.1| MGC131104 protein [Xenopus laevis]
Length = 418
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 148 DDNLQKYDLDGLEKTLQREVFGQTRAIEKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 206
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++ + K ++ + FV ++ + + PNE+ V + +++ I ++ +
Sbjct: 207 SHTGRLLA----KHFRSVVDNDFVLQYYTNHNCPNESDVIQCQAEVSAMISQMISRAEIE 262
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+F+FDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 263 EKIPVFLFDEVEAMPVALLDVLHSYFQ----LNQSNEYLNVVYILISNIGGHEITKFVLQ 318
>gi|211828947|gb|AAH80527.2| TOR2A protein [Homo sapiens]
Length = 155
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
F N R L +W+ N+TAC R++F+FDE+DK P GL++V+ PF+ V +
Sbjct: 42 FANATSGPTCRKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTN 101
Query: 213 FQNTIFLFL 221
++ IF+F+
Sbjct: 102 YRKAIFIFI 110
>gi|260811159|ref|XP_002600290.1| hypothetical protein BRAFLDRAFT_66793 [Branchiostoma floridae]
gi|229285576|gb|EEN56302.1| hypothetical protein BRAFLDRAFT_66793 [Branchiostoma floridae]
Length = 568
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 71 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LEE+L Q + GQ +A + A+ H + H + L +S +G G GK ++ S
Sbjct: 233 ALEEELNQRLIGQHIAKRVVLEAMSGHLAGK-HGSTPLVMSFYGPSGVGKTFL-----SR 286
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDEVDK 189
+ R+ + H+F HFP+ YR Q+ +W+ NV+ DR +F+FDE++
Sbjct: 287 LLSRFLSQSCGVRAHEFIIPHHFPHPGEAWQYREQVRDWVRGNVSHSDRQHLFVFDEMET 346
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
L + ++ ++ NT+F+F+
Sbjct: 347 VYPSLAEGLLSLLEEDTT-------NTMFIFI 371
>gi|444521173|gb|ELV13114.1| hypothetical protein TREES_T100011187 [Tupaia chinensis]
Length = 427
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L + V GQ A++ I L+++ HN + L ++LHG G GK
Sbjct: 146 DDNAQRYDLDGLEKALGRAVFGQPAAVARIVALLRDYLATHVHN-RPLLLALHGPSGVGK 204
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ G V +++ R H P R +L + V +
Sbjct: 205 SHVGRLLARH-FRAVLSGGVP--VLQYHVRHHCPQPRPAQECREELARRVADVVARAEAE 261
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DEV+ P LLD + F+ ++ F N I++ LS++GG E+ L+
Sbjct: 262 EKTPLVVLDEVELMPLALLDELQGFLQPQRSHH---FHNAIYVLLSSNGGAEVTRFVLQ 317
>gi|397492351|ref|XP_003817087.1| PREDICTED: torsin-4A, partial [Pan paniscus]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 89 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 147
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC--- 177
++V + +D S V ++++R H P R +L +
Sbjct: 148 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADXXAQAEAE 204
Query: 178 -DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI------- 229
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+
Sbjct: 205 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQN 261
Query: 230 MNTFLELRKSGER 242
+ L LR G R
Sbjct: 262 ASRALPLRPDGSR 274
>gi|354503370|ref|XP_003513754.1| PREDICTED: torsin family protein C9orf167 homolog [Cricetulus
griseus]
gi|344251303|gb|EGW07407.1| Torsin family protein C9orf167-like [Cricetulus griseus]
Length = 427
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALRRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D V ++++R H P + V R +L + V +
Sbjct: 196 SHVGRLLARHFHDVLEDGA---LVLQYHARHHCPEQRPVQECRKELAQRVADVVAQAEAE 252
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH N I++ LS GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHGLLQPQRSHH-------LHNAIYVLLSGVGGLEITHF 305
Query: 233 FLE 235
L+
Sbjct: 306 VLQ 308
>gi|313243743|emb|CBY42363.1| unnamed protein product [Oikopleura dioica]
Length = 153
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 115
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNSRWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWI 170
G GKNY+T + +S+F +GT S F+H S +HF +++++ + QL +WI
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKTHISQLQSWI 152
>gi|312370738|gb|EFR19069.1| hypothetical protein AND_23112 [Anopheles darlingi]
Length = 507
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
+L I C ++FIFDEV+K P GL D I+ +D+HA + +F+ +IF+FLSN
Sbjct: 314 RLVEDIKRATAKCPTSLFIFDEVEKMPAGLFDTIVSLLDNHAYTKEHNFRQSIFVFLSNV 373
Query: 225 GGTEIMN 231
G EI N
Sbjct: 374 AGPEIAN 380
>gi|15680258|gb|AAH14484.1| TOR1A protein [Homo sapiens]
Length = 197
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 169
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 154
>gi|119608314|gb|EAW87908.1| torsin family 1, member A (torsin A), isoform CRA_b [Homo sapiens]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 169
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 186
>gi|397503810|ref|XP_003822511.1| PREDICTED: torsin-1A [Pan paniscus]
Length = 318
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 79 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 135
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 169
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 136 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 186
>gi|194226094|ref|XP_001491173.2| PREDICTED: torsin family protein C9orf167-like [Equus caballus]
Length = 550
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 264 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 322
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V +++++ H P R +L + V +
Sbjct: 323 SHVGRLLARH-FRAVLEDGA--LVLQYHAQHHCPEPRAAQDCREELAQRVADVVARAEAE 379
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DEV+ P LLD + F+ + F N I++ LS +GG I L+
Sbjct: 380 EKTPLLVLDEVELMPAALLDELHGFLQPQRSH---PFHNAIYVLLSRTGGPHITRFVLQ 435
>gi|170054429|ref|XP_001863125.1| torsin a [Culex quinquefasciatus]
gi|167874731|gb|EDS38114.1| torsin a [Culex quinquefasciatus]
Length = 237
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 161 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 220
++ L I + C ++FIFDE++K G+ D I+ +DHH+ F IF+F
Sbjct: 1 MFPFSLAAGIKKAIKDCPYSLFIFDEIEKLKPGVFDAIVNLLDHHSSLKGYDFSKAIFIF 60
Query: 221 LSNSGGTEIMNTFLELRKSGE 241
LSNS GTEI + SG
Sbjct: 61 LSNSAGTEIAAKLKSITDSGR 81
>gi|291230660|ref|XP_002735284.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 666
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 78 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKD 137
+ V GQ+L + A+ + N TK L +S HG GTGK VT ++ +F ++
Sbjct: 398 KSVFGQDLVNQILPSAILKYMYNDV--TKPLVLSFHGWTGTGKTLVTSVLIEELFIKH-- 453
Query: 138 KGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDV 197
R H+F S + F +E++ +Y + N+I S V C + +FDE+D PK ++
Sbjct: 454 -NLDRCAHRFISSLDFASEDNYKVYNTAIMNFINSTV-KCKVRLLVFDEIDIIPKQMIPR 511
Query: 198 IIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
+ ++ +QI +I + SN G EI N F+
Sbjct: 512 LHALFSDNSHLSQIG--KSICILESNLFGHEI-NRFM 545
>gi|307205303|gb|EFN83661.1| Torsin-like protein [Harpegnathos saltator]
Length = 102
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGLPGTGKNYVTDFIVSS 130
L+ L +V+GQ++A I AL+ HF HN+ KAL +S HG PGTGKNYV I +
Sbjct: 10 LDYMLTANVYGQQIAHEAIINALRGHFYT--HNSPKALVMSFHGTPGTGKNYVAQMIAMA 67
Query: 131 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLT 167
++K KG S++ + FN R FP + + Y++ L
Sbjct: 68 LYK----KGIQSQYYYFFNGRNDFPLQRKLDDYKVCLN 101
>gi|224073045|ref|XP_002191722.1| PREDICTED: torsin-4A-A-like [Taeniopygia guttata]
Length = 549
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ + + V GQ++A+ I LK++ HN K L ISL+G G GK
Sbjct: 280 DDNLQKYDLDGLEKTMHREVFGQKVAVESIVELLKDYLATHIHN-KPLVISLNGPTGVGK 338
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++V ++++ F+ D + FV ++ H P+ + L+ I VT +
Sbjct: 339 SHVG-WVLAKHFRSVMD---NDFVLQYFVMHHCPSGVDPLTCEIDLSKKISDMVTRAEIE 394
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
+FI DEV+ LLD + F + + F N I++ +SN GG EI
Sbjct: 395 EKTPLFILDEVELMSPVLLDTLSRFFEPNQTNE---FLNAIYILISNLGGAEI 444
>gi|345320142|ref|XP_001521478.2| PREDICTED: torsin-3A-like, partial [Ornithorhynchus anatinus]
Length = 147
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+N+ LE L +HGQ LA + A+++ F H KALA+S HG GTGKN+V
Sbjct: 34 NNITGLESDLSIRLHGQHLARHVVLKAVRD-FLALPHPEKALALSFHGWSGTGKNFVARM 92
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQ 165
+ ++ Y+D S V F S HFP+ +V LY+++
Sbjct: 93 MADNL---YRDGLGSECVKVFISLFHFPHPRYVDLYQVR 128
>gi|449270257|gb|EMC80952.1| Torsin family protein C9orf167 like protein, partial [Columba
livia]
Length = 424
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ + + V GQ+LA+ + LK++ HN K L ISL+G G GK
Sbjct: 155 DDNLQKYDLDGLEKTMHREVFGQKLAVESMMELLKDYLATHIHN-KPLVISLNGPTGVGK 213
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V ++++ F+ D FV ++ H P+ + L+ I VT +
Sbjct: 214 SHV-GWLLAKHFRSVMDND---FVLQYFVMHHCPDGVAPLTCEIDLSEKISDMVTRAEVE 269
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI-SFQNTIFLFLSNSGGTEI 229
+FI DEV+ LLD + F + NQ F N I++ +SN GG EI
Sbjct: 270 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEI 319
>gi|334312269|ref|XP_001374726.2| PREDICTED: torsin family protein C9orf167 homolog [Monodelphis
domestica]
Length = 395
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ+ A I L+++ H ++ L ISL+G G GK
Sbjct: 127 DDNLQKYDLDGLEKALQRGVFGQKAATDSIMELLRDYLATHIH-SQPLVISLNGPSGVGK 185
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + K ++ FV ++ H P+ R L+ I VT +
Sbjct: 186 SHVGRLLA----KHFRSVMEGDFVFQYYVMHHCPDCQEGFTCRQDLSERITDMVTRAEVE 241
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+FI DEV+ GLLD + F+ F N I++ +S+ GG+EI L+
Sbjct: 242 EKIPVFILDEVEFMSPGLLDTLHGFLQPR---QSNEFLNAIYVLISSIGGSEITRFVLQ 297
>gi|292617967|ref|XP_002663514.1| PREDICTED: torsin family protein C9orf167 homolog [Danio rerio]
Length = 425
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE+ LK+ V GQ+ + G L+++ HN K L +S HG G GK
Sbjct: 156 DDHVLKYDLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPLVLSFHGPTGVGK 214
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + + ++ V ++ H P ++ + + L + I V+ +
Sbjct: 215 SHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLESHISEMVSQGEEE 270
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
+FIFDEV+ P+ L+D + I N + N I++ +SN G +I
Sbjct: 271 EKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNLGHEDI 320
>gi|62955091|ref|NP_001017561.1| torsin-4A [Danio rerio]
gi|82178190|sp|Q568B8.1|TOR4A_DANRE RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|62204430|gb|AAH92931.1| Zgc:110567 [Danio rerio]
Length = 409
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL 108
FL + E D ++ ++ LE+ LK+ V GQ+ + G L+++ HN K L
Sbjct: 129 FLQVYNAIENLDDHVLKY-DLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPL 186
Query: 109 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN 168
+S HG G GK++V + + ++ V ++ H P ++ + + L +
Sbjct: 187 VLSFHGPTGVGKSHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLES 242
Query: 169 WIISNVTACDR----AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
I V+ + +FIFDEV+ P+ L+D + I N + N I++ +SN
Sbjct: 243 HISEMVSQGEEEEKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNL 299
Query: 225 GGTEI 229
G +I
Sbjct: 300 GHEDI 304
>gi|363740304|ref|XP_415532.3| PREDICTED: torsin family protein C9orf167 homolog A [Gallus gallus]
Length = 531
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ + + V GQ+LA+ I LK++ HN K L +SL+G G GK
Sbjct: 262 DDNLQKYDLDGLEKTMHREVFGQKLAVESIMQLLKDYLATHIHN-KPLVLSLNGPTGVGK 320
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++V ++++ F+ D + FV ++ H P+ L+ I VT +
Sbjct: 321 SHVG-WLLAKHFRSVMD---NDFVLQYFVMHHCPSGAAPLTCETDLSKKISDMVTRAEIE 376
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI-SFQNTIFLFLSNSGGTEIMN---- 231
+FI DEV+ LLD + F + NQ F N I++ +SN GG EI
Sbjct: 377 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEITKFVIQ 432
Query: 232 ----TFLELRKSGERYITI 246
L+ R E +++
Sbjct: 433 NASAELLQQRSGAEELLSV 451
>gi|76631110|ref|XP_875868.1| PREDICTED: torsin family protein C9orf167 [Bos taurus]
gi|297480894|ref|XP_002691726.1| PREDICTED: torsin family protein C9orf167 [Bos taurus]
gi|296482005|tpg|DAA24120.1| TPA: hypothetical protein BOS_12245 [Bos taurus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+ L++ V GQ A+ + L+++ H ++ L ++LHG G GK++V +
Sbjct: 142 LEKTLQRAVFGQPAAVGRLVALLRDYLATHVH-SRPLLLALHGPSGVGKSHVGRLLARH- 199
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI---ISNVTACDR-AIFIFDEV 187
F+ + G V ++++R H P + R +L + ++ A ++ + + D+
Sbjct: 200 FRAVLEDGA--LVLQYHTRHHCPAPRAATGCREELARRVADVLARAEAEEKTPLLVLDDA 257
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ P LLD + + F N +++ LS +GG E+ L+
Sbjct: 258 ELLPPALLDELHGLLQPQ---RPPRFHNAVYVLLSGAGGAEVTRFVLQ 302
>gi|326930208|ref|XP_003211243.1| PREDICTED: torsin family protein C9orf167 homolog A-like [Meleagris
gallopavo]
Length = 326
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ + + V GQ+LA+ I LK++ HN K L +SL+G G GK
Sbjct: 57 DDNLQKYDLDGLEKTMHREVFGQKLAVESIMQLLKDYLATHIHN-KPLVLSLNGPTGVGK 115
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++V ++++ F+ D + FV ++ H P+ L+ I VT +
Sbjct: 116 SHV-GWLLAKHFRSVMD---NDFVLQYFVMHHCPSGVDPLTCETDLSKKISDMVTRAEIE 171
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI-SFQNTIFLFLSNSGGTEIMN---- 231
+FI DEV+ LLD + F + NQ F N I++ +SN GG EI
Sbjct: 172 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEITKFIIQ 227
Query: 232 ----TFLELRKSGERYITI 246
L+ R E +++
Sbjct: 228 NASAELLQQRSGAEELLSV 246
>gi|149038989|gb|EDL93209.1| rCG45678, isoform CRA_a [Rattus norvegicus]
Length = 310
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL 164
F + S VH F+ IHFP+ +H Y++
Sbjct: 111 F---RGGLRSPHVHHFSPIIHFPHPSHTEQYKV 140
>gi|348574448|ref|XP_003473002.1| PREDICTED: torsin family protein C9orf167-like [Cavia porcellus]
Length = 413
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I L+++ H ++ L ++LHG G GK
Sbjct: 140 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIMALLRDYLATHVH-SRPLLLALHGPSGVGK 198
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQL----TNWIISNVTA 176
++V + +D V +++++ H P + R +L +
Sbjct: 199 SHVGRLLARHFHAVLEDGA---LVLQYHAQHHCPEPHAAQGCREELARRVAAVVAQAEAE 255
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + DE + P LLD + + + F N I++ LS GG E+ L+
Sbjct: 256 EKTPLVVLDEAELLPPALLDELHGLLQPQRAHQ---FHNAIYVLLSGMGGAEVTRFVLQ 311
>gi|410903964|ref|XP_003965463.1| PREDICTED: torsin-4A-like [Takifugu rubripes]
Length = 444
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE+ L + V GQ+ A+ + L+++ Y ++K L +SLHG G GK
Sbjct: 168 DDHVLKYDLEGLEKTLMREVFGQQEAVDGLLSHLRDYLST-YAHSKPLVVSLHGPSGVGK 226
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
+++ + + ++ V ++ H P E HV L+ I V +
Sbjct: 227 SHLGRLLA----RHFRSVTGEAMVLQYYVLHHCPQEAHVPRCAHNLSAVISEMVRQAEEE 282
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
+ +FDE++ +LD++ + A + +QN I+L LSN G ++ L
Sbjct: 283 EKIPLLVFDEMEHMHGEILDMLWEAV---ASRDSNEYQNAIYLLLSNLGQEHVIKYML 337
>gi|326667655|ref|XP_003198645.1| PREDICTED: torsin family protein C9orf167 homolog [Danio rerio]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE L + V GQ+ A+ + L N + + Y + + LA+SLHG G GK
Sbjct: 111 DDHVVKYDLEGLERSLHREVFGQQEALEELMDHL-NDYLSTYAHQQPLALSLHGPSGVGK 169
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
+++ + DK ++ K + + ++ S ++T +
Sbjct: 170 SHLGRLLARHFRSIVDDKLVVHYISKHHCPLQEEAQHCASTIARRITEVVTQAEEEEQIP 229
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
FI DEV+ LLD + F+ F N +++FLS+ G +EI L+
Sbjct: 230 FFILDEVEAMAPPLLDTLQTFLQSDQTNE---FLNVVYVFLSSLGQSEITAYVLQ 281
>gi|157954512|ref|NP_001103331.1| uncharacterized protein LOC100126135 [Danio rerio]
gi|156230268|gb|AAI51942.1| Si:ch211-241p16.1 protein [Danio rerio]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE L + V GQ+ A+ + L N + + Y + + LA+SLHG G GK
Sbjct: 111 DDHVVKYDLEGLERSLHREVFGQQEALEELMDHL-NDYLSTYAHQQPLALSLHGPSGVGK 169
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
+++ + DK ++ K + + ++ S ++T +
Sbjct: 170 SHLGRLLARHFRSIVDDKLVVHYISKHHCPLQEEAQHCASTIARRITEVVTQAEEEEQIP 229
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
FI DEV+ LLD + F+ F N +++FLS+ G +EI L+
Sbjct: 230 FFILDEVEAMAPPLLDTLQTFLQSDQTNE---FLNVVYVFLSSLGQSEITAHVLQ 281
>gi|395506591|ref|XP_003757615.1| PREDICTED: torsin-4A [Sarcophilus harrisii]
Length = 422
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ+ A I L+++ H ++ L IS +G G GK
Sbjct: 154 DDNLQKYDLDGLEKALQRGVFGQKAATDSIMELLRDYLATHIH-SQPLVISFNGPSGVGK 212
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + K ++ FV ++ H P+ + L I VT +
Sbjct: 213 SHVGRLLA----KHFRSVMDGDFVLQYYVMHHCPDPQEGPACQQDLAERITDMVTRAEVE 268
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+FI DEV+ LLD + F+ F N I++ +S+ GG+E+ L+
Sbjct: 269 EKIPVFILDEVEFMSPALLDTLHGFLQPQ---QSNEFLNAIYVLISSIGGSEVTRLVLQ 324
>gi|345309623|ref|XP_001521765.2| PREDICTED: torsin family protein C9orf167 homolog A-like, partial
[Ornithorhynchus anatinus]
Length = 386
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q +V LE+ L++ V GQ A+ + L+++ H +K L +SL+G G GK
Sbjct: 118 DDNLQKYDVDGLEKTLRRGVFGQAAAVDGLVELLRDYLATHVH-SKPLVLSLNGPSGVGK 176
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI---ISNVTAC 177
++V + + ++ FV + P + R +L I ++ A
Sbjct: 177 SHVGRLLA----RHFRSVMDPDFVTHYYVLHRCPEREALPACRRELAARIADVVARAEAE 232
Query: 178 DR-AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+R +FI DEV+ LLD + ++ + N+ F N +++ +S+ GG+EI L+
Sbjct: 233 ERVPLFILDEVEFMAPDLLDTLHAYL-QPGLSNE--FLNAVYVLISSIGGSEITRFVLQ 288
>gi|301121360|ref|XP_002908407.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103438|gb|EEY61490.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 366
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 54 GGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKA-LAIS 111
G G CT F+ + VL+ L+ ++ GQE A+ + GA++ F +A L ++
Sbjct: 5 GLGYQCT--FVDKPSQTVLQ-HLQDNLKGQERAVEAVVGAIEAWEFSRSSTKDRAPLVLA 61
Query: 112 LHGLPGTGKNYVTDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQ 165
+ G GTGK +++ + ++FKR K +K + F N N ++ Y Q
Sbjct: 62 ITGPTGTGKTEMSNLVAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQ 121
Query: 166 LTNWIISNVTACD-RAIFIFDEVDKFPKGLLDVIIPFIDH--------HAVYNQISFQNT 216
+ + ++ C +AI + DEV K LDV++ + H V I N
Sbjct: 122 IKTRLAEHLHHCSGKAIVVIDEVQKVIPHTLDVLMEAVSESSQFSYYKHGVTKNIDTANV 181
Query: 217 IFLFLSNSGGTEIMNTFLELRKSGE 241
IF+ +S+ G E+ ++ E
Sbjct: 182 IFVLVSDIGVGEMEQVMIQYDTRDE 206
>gi|355567293|gb|EHH23634.1| hypothetical protein EGK_07139, partial [Macaca mulatta]
Length = 387
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ AI+ I ++++ H ++ L ++LHG G GK
Sbjct: 106 DDNAQRYDLDGLEKALQRAVFGQPAAIARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 164
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 165 SHVGRLLARHFRSVLED---SSLVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 221
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 222 EKTPLLVLDDVELLPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 277
>gi|311246904|ref|XP_003122389.1| PREDICTED: torsin family protein C9orf167-like [Sus scrofa]
Length = 415
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK++V +
Sbjct: 143 LEKALQRAVFGQPSAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGKSHVGRLLARHF 201
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEV 187
+D S V ++++R H P+ R +L + V + + + DEV
Sbjct: 202 RAVLED---SALVLQYDARHHCPDPRAAQDCREELAQRVADVVARAEAEEKTPLLVLDEV 258
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 259 ELLPQALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 303
>gi|302563875|ref|NP_001180736.1| torsin family protein C9orf167 [Macaca mulatta]
Length = 423
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ AI+ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAIARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SSLVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELLPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|156408431|ref|XP_001641860.1| predicted protein [Nematostella vectensis]
gi|156229000|gb|EDO49797.1| predicted protein [Nematostella vectensis]
Length = 454
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 130
LE++LK+H+ GQE I + GA++ +N +H+ L G G GK + +
Sbjct: 99 LEQRLKEHIVGQEGPILVVSGAIRRK-ENGWHDEDHPLVFLFLGSSGIGKTELAKQVAHY 157
Query: 131 IFKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
I K K D + H+ I P QLT + C A+ +F
Sbjct: 158 IHKDNKKGFIRLDMSEYQEKHEVAKMIGAPPGYIGYDQGGQLTK----KLKECPNAVVLF 213
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L V++ D + + I ++ IF+ SN EI N LELRK
Sbjct: 214 DEVDKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIANHALELRKEA 273
Query: 241 E 241
+
Sbjct: 274 D 274
>gi|348523708|ref|XP_003449365.1| PREDICTED: caseinolytic peptidase B protein homolog [Oreochromis
niloticus]
Length = 641
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 290 LERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 349
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDRA 180
K K D + H+ I P +E L +L + AC A
Sbjct: 350 HKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKL---------LRACPNA 400
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FDEVDK +L +++ D + + I ++ IF+ SN EI L+L
Sbjct: 401 VVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASDEIAQHALQL 460
Query: 237 RKSGER 242
R+ E+
Sbjct: 461 RQEAEQ 466
>gi|47228499|emb|CAG05319.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL 108
F+ + E D I+ ++ LE+ L + V GQ A+ + ++++ Y + K L
Sbjct: 147 FMQVYNAIENLDDHVIKY-DLEGLEKTLLREVVGQREAVDGLLSHMRDYLST-YAHRKPL 204
Query: 109 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN 168
+SLHG G GK+Y+ + + ++ V ++ H P + L+
Sbjct: 205 LVSLHGPTGVGKSYLGRLLA----RHFRSVAGEAMVLQYYVLHHCPQKADAPHCAHNLST 260
Query: 169 WIISNVTACDR----AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
I VT + +FIFDEV+ +LD + + A + +QN I+L LSN
Sbjct: 261 VITEMVTQAEEEEKIPLFIFDEVEHMHGEILDALWGAV---ASRDSNEYQNAIYLLLSNL 317
Query: 225 GGTEIMNTFL 234
G I+ L
Sbjct: 318 GHEHIVKFML 327
>gi|432892483|ref|XP_004075803.1| PREDICTED: caseinolytic peptidase B protein homolog [Oryzias
latipes]
Length = 675
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 324 LERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 383
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDRA 180
K K D + H+ I P +E L +L + AC A
Sbjct: 384 HKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKL---------LRACPNA 434
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FDEVDK +L +++ D + + I ++ IF+ SN EI L+L
Sbjct: 435 VVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASEEIAQHALQL 494
Query: 237 RKSGE 241
R+ E
Sbjct: 495 RQEAE 499
>gi|170284743|gb|AAI61411.1| LOC100145643 protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 311 LERRLKEHIVGQESAIATVAAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 363
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T+R++HK + F ++ V+ + ++ +
Sbjct: 364 ------KQTARYMHKDIKKGFIRLDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 417
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ N+G EI
Sbjct: 418 CPDAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTCNAGSDEIAQY 477
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 478 GLQLRQEA 485
>gi|322792402|gb|EFZ16386.1| hypothetical protein SINV_11479 [Solenopsis invicta]
Length = 642
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LKQH+ GQE IS + ++ L G G GK + + + I
Sbjct: 293 LEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 352
Query: 132 FKRYKDK----GTSRF--VHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDRA 180
K D S + H+ I P +++ L +L + C A
Sbjct: 353 HKNKLDAFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKL---------LKKCPSA 403
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FDEVDK +L V++ D + + I +N IF+ SN G EI L+L
Sbjct: 404 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAEHALQL 463
Query: 237 RKSGERYI 244
R ER +
Sbjct: 464 RAEAERLL 471
>gi|355679756|gb|AER96406.1| ClpB caseinolytic peptidase B-like protein [Mustela putorius furo]
Length = 326
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 25/188 (13%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 68 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 127
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 128 HK------TAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 181
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 182 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 241
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 242 ALQLRQEA 249
>gi|194378588|dbj|BAG63459.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 353
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + KF R I P QLT + C A+ +F
Sbjct: 354 HKDAK-KGFIRLDMSKFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 408
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 409 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 468
>gi|395521288|ref|XP_003764750.1| PREDICTED: caseinolytic peptidase B protein homolog [Sarcophilus
harrisii]
Length = 669
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 301 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 353
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 354 ------KQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 407
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 408 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 467
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 468 ALQLRQEA 475
>gi|432106670|gb|ELK32323.1| Caseinolytic peptidase B protein like protein [Myotis davidii]
Length = 596
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 228 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 280
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 281 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 334
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 335 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 394
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 395 ALQLRQEA 402
>gi|350588232|ref|XP_003129658.3| PREDICTED: caseinolytic peptidase B protein homolog [Sus scrofa]
Length = 504
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 136 LEQRLKEHIIGQESAIAAVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 188
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T+R++HK + F + V+ + ++ +
Sbjct: 189 ------KQTARYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 242
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 243 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 302
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 303 ALQLRQEA 310
>gi|196012549|ref|XP_002116137.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
gi|190581460|gb|EDV21537.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
Length = 613
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGLPGTGKNYVTDFIVSS 130
LE+++K+ + GQEL I+ + A++ +N +HN + + G G GK + +
Sbjct: 272 LEKRIKEQIIGQELPIAAVASAIRRK-ENGWHNEDRPMVFLFLGSSGIGKTELAKQVAKY 330
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
I K ++ ++ + I QLT + C A+ + DEVDK
Sbjct: 331 IHKDLEN--VAKMIGSPPGYIGHDEGG-------QLT----KRLKKCSNAVVLLDEVDKA 377
Query: 191 PKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
+L +++ D + + I ++ IF+ N G EI N +ELRK +
Sbjct: 378 HPDVLTILLQLFDEGRLTDGKGKTIDCKDAIFIMTCNLGNAEIANYAMELRKKAK 432
>gi|119608785|gb|EAW88379.1| hCG1806355 [Homo sapiens]
Length = 249
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 104 NTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR 163
+++ L ++LHG G GK++V + +D S V ++++R H P R
Sbjct: 10 HSRPLLLALHGPSGVGKSHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCR 66
Query: 164 LQLTNWIISNVTACDR----AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFL 219
+L + V + + + D+V+ P+ LLD + F+ ++ F N I++
Sbjct: 67 EELARRVADVVARAEAEEKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYV 123
Query: 220 FLSNSGGTEIMNTFLE 235
LS +GG E+ L+
Sbjct: 124 LLSGAGGAEVTRFVLQ 139
>gi|444731498|gb|ELW71851.1| Caseinolytic peptidase B protein like protein [Tupaia chinensis]
Length = 677
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAEH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|149068723|gb|EDM18275.1| rCG39494, isoform CRA_b [Rattus norvegicus]
gi|149068724|gb|EDM18276.1| rCG39494, isoform CRA_b [Rattus norvegicus]
Length = 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|354501326|ref|XP_003512743.1| PREDICTED: caseinolytic peptidase B protein homolog [Cricetulus
griseus]
Length = 677
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|344257982|gb|EGW14086.1| Caseinolytic peptidase B protein-like [Cricetulus griseus]
Length = 676
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 475 ALQLRQEA 482
>gi|148684570|gb|EDL16517.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a [Mus
musculus]
Length = 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|126327952|ref|XP_001369464.1| PREDICTED: caseinolytic peptidase B protein homolog [Monodelphis
domestica]
Length = 701
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 333 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 385
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 386 ------KQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 439
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 440 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 499
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 500 ALQLRQEA 507
>gi|426369657|ref|XP_004051801.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Gorilla gorilla gorilla]
Length = 707
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|47718016|gb|AAH70917.1| ClpB caseinolytic peptidase B homolog (E. coli) [Rattus norvegicus]
gi|149068722|gb|EDM18274.1| rCG39494, isoform CRA_a [Rattus norvegicus]
Length = 677
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|395814899|ref|XP_003780975.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Otolemur garnettii]
Length = 707
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEA 513
>gi|296217135|ref|XP_002754878.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Callithrix jacchus]
Length = 707
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLRQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|74192958|dbj|BAE34982.1| unnamed protein product [Mus musculus]
Length = 677
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|226501824|ref|NP_001141154.1| uncharacterized protein LOC100273240 [Zea mays]
gi|194702950|gb|ACF85559.1| unknown [Zea mays]
Length = 707
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 506 ALQLRQEA 513
>gi|345788351|ref|XP_003433059.1| PREDICTED: caseinolytic peptidase B protein homolog [Canis lupus
familiaris]
Length = 506
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|74185590|dbj|BAE32689.1| unnamed protein product [Mus musculus]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|402894552|ref|XP_003910418.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Papio anubis]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|148684573|gb|EDL16520.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_d [Mus
musculus]
Length = 563
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 195 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 247
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 248 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 301
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 302 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 361
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 362 ALQLRQEA 369
>gi|114639256|ref|XP_001174710.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
troglodytes]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|426369661|ref|XP_004051803.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4
[Gorilla gorilla gorilla]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|74188805|dbj|BAE28128.1| unnamed protein product [Mus musculus]
Length = 598
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 230 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 282
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 283 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 336
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 337 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 396
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 397 ALQLRQEA 404
>gi|6677983|ref|NP_033217.1| caseinolytic peptidase B protein homolog [Mus musculus]
gi|2493735|sp|Q60649.1|CLPB_MOUSE RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|563129|gb|AAA62869.1| SKD3 [Mus musculus]
gi|29165797|gb|AAH48175.1| ClpB caseinolytic peptidase B homolog (E. coli) [Mus musculus]
gi|74194260|dbj|BAE24667.1| unnamed protein product [Mus musculus]
gi|74216057|dbj|BAE23708.1| unnamed protein product [Mus musculus]
gi|148684572|gb|EDL16519.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c [Mus
musculus]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|410045552|ref|XP_003952017.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|355752436|gb|EHH56556.1| Suppressor of potassium transport defect 3 [Macaca fascicularis]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 513
>gi|386782123|ref|NP_001248231.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
gi|355566841|gb|EHH23220.1| Suppressor of potassium transport defect 3 [Macaca mulatta]
gi|383421895|gb|AFH34161.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 513
>gi|194378488|dbj|BAG63409.1| unnamed protein product [Homo sapiens]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|343961061|dbj|BAK62120.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|426369655|ref|XP_004051800.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Gorilla gorilla gorilla]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|62751534|ref|NP_001015625.1| caseinolytic peptidase B protein homolog [Bos taurus]
gi|75070048|sp|Q5E9N5.1|CLPB_BOVIN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|59858135|gb|AAX08902.1| suppressor of potassium transport defect 3 [Bos taurus]
gi|74268281|gb|AAI03470.1| ClpB caseinolytic peptidase B homolog (E. coli) [Bos taurus]
gi|296479834|tpg|DAA21949.1| TPA: caseinolytic peptidase B protein homolog [Bos taurus]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|13540606|ref|NP_110440.1| caseinolytic peptidase B protein homolog isoform 1 [Homo sapiens]
gi|25009267|sp|Q9H078.1|CLPB_HUMAN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|12053313|emb|CAB66843.1| hypothetical protein [Homo sapiens]
gi|13623579|gb|AAH06404.1| ClpB caseinolytic peptidase B homolog (E. coli) [Homo sapiens]
gi|119595264|gb|EAW74858.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a
[Homo sapiens]
gi|157928554|gb|ABW03573.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
construct]
gi|157929202|gb|ABW03886.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
construct]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|402894550|ref|XP_003910417.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Papio anubis]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|119595266|gb|EAW74860.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c
[Homo sapiens]
Length = 690
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|296217137|ref|XP_002754879.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Callithrix jacchus]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLRQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|12621118|ref|NP_075236.1| caseinolytic peptidase B protein homolog [Rattus norvegicus]
gi|25009257|sp|Q9WTT2.1|CLPB_RAT RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|4958935|dbj|BAA78095.1| SKD3 [Rattus norvegicus]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L+QH+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|410045547|ref|XP_003952015.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
gi|410045550|ref|XP_003952016.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
gi|410334181|gb|JAA36037.1| ClpB caseinolytic peptidase B homolog [Pan troglodytes]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|421877059|ref|ZP_16308610.1| Putative ATP-dependent Clp protease [Leuconostoc citreum LBAE C10]
gi|372557190|emb|CCF24730.1| Putative ATP-dependent Clp protease [Leuconostoc citreum LBAE C10]
Length = 632
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+S+ R+L +LK HV GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSHVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ ++F G ++ +F+ S F SL R + + + + V A+
Sbjct: 342 TAKQLALNLF------GNAQNFIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAV 390
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 391 LLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|338727038|ref|XP_003365425.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Equus caballus]
Length = 676
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 475 ALQLRQEA 482
>gi|426245077|ref|XP_004016341.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Ovis
aries]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|385719196|ref|NP_001245322.1| caseinolytic peptidase B protein homolog isoform 3 [Homo sapiens]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|194213476|ref|XP_001917508.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Equus caballus]
Length = 706
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 338 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 397
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 398 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 452
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 453 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 512
>gi|403262176|ref|XP_003923471.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Saimiri boliviensis boliviensis]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLRQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 513
>gi|385719194|ref|NP_001245321.1| caseinolytic peptidase B protein homolog isoform 2 [Homo sapiens]
gi|10435042|dbj|BAB14467.1| unnamed protein product [Homo sapiens]
gi|119595265|gb|EAW74859.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_b
[Homo sapiens]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|426245083|ref|XP_004016344.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Ovis
aries]
Length = 580
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 212 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 264
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 265 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 318
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 319 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 378
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 379 ALQLRQEA 386
>gi|395814897|ref|XP_003780974.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Otolemur garnettii]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEA 483
>gi|402894548|ref|XP_003910416.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Papio anubis]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|395814901|ref|XP_003780976.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Otolemur garnettii]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEA 454
>gi|440907877|gb|ELR57966.1| Caseinolytic peptidase B protein-like protein [Bos grunniens mutus]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 506 ALQLRQEA 513
>gi|67970204|dbj|BAE01446.1| unnamed protein product [Macaca fascicularis]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 513
>gi|26328241|dbj|BAC27861.1| unnamed protein product [Mus musculus]
Length = 678
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|426245079|ref|XP_004016342.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Ovis
aries]
Length = 707
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 506 ALQLRQEA 513
>gi|345788353|ref|XP_850367.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Canis lupus familiaris]
Length = 654
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 286 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 338
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 339 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 392
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 393 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 452
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 453 ALQLRQEA 460
>gi|67969551|dbj|BAE01124.1| unnamed protein product [Macaca fascicularis]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|344258466|gb|EGW14570.1| Torsin-1B [Cricetulus griseus]
Length = 158
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITI 246
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 1 MDKLHPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEI 60
Query: 247 H 247
Sbjct: 61 Q 61
>gi|343958262|dbj|BAK62986.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
Length = 410
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 42 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 94
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 95 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 148
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 149 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 208
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 209 ALQLRQEA 216
>gi|426245081|ref|XP_004016343.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Ovis
aries]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 386
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 447 ALQLRQEA 454
>gi|301783551|ref|XP_002927187.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Ailuropoda melanoleuca]
Length = 677
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>gi|197098332|ref|NP_001127139.1| caseinolytic peptidase B protein homolog [Pongo abelii]
gi|55725021|emb|CAH89378.1| hypothetical protein [Pongo abelii]
Length = 677
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|403262174|ref|XP_003923470.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Saimiri boliviensis boliviensis]
Length = 677
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLRQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|332211399|ref|XP_003254807.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Nomascus leucogenys]
Length = 506
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|301783549|ref|XP_002927186.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Ailuropoda melanoleuca]
gi|281340521|gb|EFB16105.1| hypothetical protein PANDA_016950 [Ailuropoda melanoleuca]
Length = 707
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 506 ALQLRQEA 513
>gi|410045554|ref|XP_003952018.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
Length = 536
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 168 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 220
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 221 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 274
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 275 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 334
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 335 ALQLRQEA 342
>gi|196009622|ref|XP_002114676.1| hypothetical protein TRIADDRAFT_58752 [Trichoplax adhaerens]
gi|190582738|gb|EDV22810.1| hypothetical protein TRIADDRAFT_58752 [Trichoplax adhaerens]
Length = 316
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNH--FQNRYHNTKALAISLHG 114
E CTD+ + E L++ + GQELA+ + K + QN + N K HG
Sbjct: 26 ECCTDRARYHYLTNTMIESLRRDIFGQELAVQTMGNIFKRYQMSQNSFKNNKIFL--FHG 83
Query: 115 LPGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFN-SRIHFPNENHVSLYRLQLTNWIIS 172
GTGK+Y + +F G SR V F+ I N + LTN I+
Sbjct: 84 DIGTGKSYAASLLAHHLFPL----GIHSRLVMNFDLVNILDDKNNDIFQANQWLTNQILK 139
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH-AVYNQISFQNTIFLFLSNSGGTEIMN 231
C + I + D+ +VI + + NQ+ F+ F+F+S G EI N
Sbjct: 140 LSRLCYAGVIILERWDEVNLCQFNVIDSIVGNRIGDPNQMKFRRMTFIFISTMGSAEINN 199
Query: 232 T 232
Sbjct: 200 A 200
>gi|403262178|ref|XP_003923472.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Saimiri boliviensis boliviensis]
Length = 648
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLRQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|345788349|ref|XP_861363.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Canis lupus familiaris]
Length = 713
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 345 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 397
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 398 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 451
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 452 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 511
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 512 ALQLRQEA 519
>gi|194378722|dbj|BAG63526.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|397568464|gb|EJK46150.1| hypothetical protein THAOC_35199 [Thalassiosira oceanica]
Length = 1060
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE + V GQE A+ + A++ TK +A + G G GK + + +
Sbjct: 606 LEADITNRVKGQESAVKSVAKAIRRARSGLRDQTKPVATLMFCGPTGVGKTELCKALAQT 665
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
F R KD S ++ +F+ SR+ +V QLT V ++ +FD
Sbjct: 666 YFGREKDIIRIDMSEYMERFSVSRLVGSPPGYVGFEEGGQLT----EAVRRKPHSVVLFD 721
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
E++K + +L++++ +D + + +SF+NTIF+ SN G EI+
Sbjct: 722 ELEKAHEDVLNILLQVMDEGTLTDGKGRTVSFKNTIFIMTSNVGSQEIL 770
>gi|332211401|ref|XP_003254808.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Nomascus leucogenys]
Length = 561
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 193 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 245
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 246 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 299
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 300 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 359
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 360 ALQLRQEA 367
>gi|431898077|gb|ELK06780.1| Caseinolytic peptidase B protein like protein [Pteropus alecto]
Length = 425
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 57 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 109
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 110 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 163
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 164 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 223
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 224 ALQLRQEA 231
>gi|344296832|ref|XP_003420106.1| PREDICTED: caseinolytic peptidase B protein homolog [Loxodonta
africana]
Length = 706
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 338 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 397
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 398 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 452
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 453 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 512
>gi|426369659|ref|XP_004051802.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Gorilla gorilla gorilla]
Length = 662
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 353
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 354 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 408
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 409 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 468
>gi|403298507|ref|XP_003940059.1| PREDICTED: torsin-1B [Saimiri boliviensis boliviensis]
Length = 158
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITI 246
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 1 MDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDI 60
Query: 247 H 247
Sbjct: 61 Q 61
>gi|296217139|ref|XP_002754880.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Callithrix jacchus]
Length = 562
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 194 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 246
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 247 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 300
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 301 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 360
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 361 ALQLRQEA 368
>gi|385719198|ref|NP_001245323.1| caseinolytic peptidase B protein homolog isoform 4 [Homo sapiens]
Length = 662
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 353
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 354 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 408
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 409 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 468
>gi|380798225|gb|AFE70988.1| caseinolytic peptidase B protein homolog, partial [Macaca mulatta]
Length = 461
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 93 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 145
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 146 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 199
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 200 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 259
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 260 ALQLRQEA 267
>gi|410972743|ref|XP_003992816.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Felis catus]
Length = 675
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 475 ALQLRQEA 482
>gi|417403825|gb|JAA48699.1| Putative caseinolytic peptidase b protein [Desmodus rotundus]
Length = 676
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 308 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 367
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 368 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 422
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 423 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 482
>gi|410972741|ref|XP_003992815.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Felis catus]
Length = 646
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 279 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 331
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 332 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 385
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 386 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 445
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 446 ALQLRQEA 453
>gi|410972745|ref|XP_003992817.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Felis catus]
Length = 705
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 505 ALQLRQEA 512
>gi|397489414|ref|XP_003815723.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Pan
paniscus]
Length = 707
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>gi|397489418|ref|XP_003815725.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Pan
paniscus]
Length = 648
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 280 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 339
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 340 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 394
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 395 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 454
>gi|397489412|ref|XP_003815722.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Pan
paniscus]
Length = 677
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 309 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 369 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 423
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 424 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 483
>gi|351698232|gb|EHB01151.1| Caseinolytic peptidase B protein-like protein [Heterocephalus
glaber]
Length = 726
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 360 LEQRLREHIIGQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 412
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 413 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 466
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 467 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 526
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 527 ALQLRQEA 534
>gi|348531106|ref|XP_003453051.1| PREDICTED: torsin family protein C9orf167 homolog [Oreochromis
niloticus]
Length = 456
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE+ L++ V GQ+ A+ + LK++ HN K L +SLHG G GK
Sbjct: 180 DDHVLRYDLEGLEKTLRREVFGQQGAVESLLSHLKDYLSTYVHN-KPLVVSLHGPTGVGK 238
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
+++ + D V ++ H P E + L+ I V +
Sbjct: 239 SHLGRLLAGHFRSVVGDT----LVLQYYVLHHCPQEANALQCASDLSALISEMVERAEEE 294
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI-SFQNTIFLFLSNSGGTEIMNTFL 234
+FIFDE + +LD ++ + NQ + N I+LFLSN G I L
Sbjct: 295 EKIPLFIFDEAEHMHHEILDTLLQLVSS----NQSNEYLNAIYLFLSNLGHAHITKHML 349
>gi|291384328|ref|XP_002708761.1| PREDICTED: caseinolytic peptidase B [Oryctolagus cuniculus]
Length = 706
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLREHIIGQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 505 ALQLRQEA 512
>gi|397489420|ref|XP_003815726.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 5 [Pan
paniscus]
Length = 506
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + ++ +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 244
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 305 ALQLRQEA 312
>gi|348555399|ref|XP_003463511.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Cavia porcellus]
Length = 704
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLREHIIGQENAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 505 ALQLRQEA 512
>gi|397489416|ref|XP_003815724.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
paniscus]
Length = 662
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 294 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 353
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 354 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 408
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 409 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEA 468
>gi|348555397|ref|XP_003463510.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Cavia porcellus]
Length = 674
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLREHIIGQENAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 475 ALQLRQEA 482
>gi|406923818|gb|EKD60811.1| hypothetical protein ACD_54C00541G0002 [uncultured bacterium]
Length = 341
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 124
+ +R LE+ LK+ V GQ+ A+ +C A+K K + L P G GK V
Sbjct: 24 AETLRDLEKTLKRVVFGQDKAVEALCSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVA 83
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ SS+ + S ++ K SR+ +V + + + C + +
Sbjct: 84 KQLASSLGVKLLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGVDQDPHC---VLL 140
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLEL 236
DE++K + ++++ +DH + + + F+N I + SN+G TE F
Sbjct: 141 LDEMEKAHPDVYNILLQVMDHGKLTDHNGRTVDFRNVILIMTSNAGATEQSKEAIGFGRA 200
Query: 237 RKSGERYITIH 247
R++GE I
Sbjct: 201 RRTGEDTAAIE 211
>gi|213512393|ref|NP_001133269.1| Torsin family protein C9orf167 homolog [Salmo salar]
gi|209148449|gb|ACI32938.1| Torsin family protein C9orf167 homolog [Salmo salar]
Length = 439
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+ L + V GQ+ A+ + L+++ Y ++K L +SLHG G GK++V +
Sbjct: 175 LEKTLCREVFGQQGAMDALLAQLRDYLST-YVHSKPLVLSLHGPSGVGKSHVGRLLAG-- 231
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEV 187
++ V ++ H P E+ L+ + V + +FIFDE
Sbjct: 232 --HFRSVVGEPLVLQYFVLHHCPLEDDAWRCARALSILVSETVLRAEEEEKIPLFIFDEA 289
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 229
+ LLD + + + + N ++LFLSN G T I
Sbjct: 290 EHLYPELLDALSDLVRSN---RSNEYLNAVYLFLSNQGHTHI 328
>gi|339452383|ref|ZP_08655753.1| hypothetical protein LlacK3_15184 [Leuconostoc lactis KCTC 3528]
gi|399517954|ref|ZP_10759488.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
gi|398647135|emb|CCJ67515.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
Length = 632
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+S+ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ ++F G ++ +F+ S F SL R + + + + V A+
Sbjct: 342 TAKQLALNLF------GNAQNFIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAV 390
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 391 LLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|432884578|ref|XP_004074500.1| PREDICTED: torsin-4A-like [Oryzias latipes]
Length = 431
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D + ++ LE+ L++ V+GQ+ A+ + L+++ HN K L +S++G G GK
Sbjct: 163 DDHVLRYDLEGLEKTLRREVYGQQGAVGGLLSHLQDYLSTYVHN-KPLVVSVNGPTGVGK 221
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
+++ + D V ++ H P E L+ I V +
Sbjct: 222 SHLGRLLAGHFRSVIGDA----LVLQYYVLHHCPQEADAPHCARNLSTRISDMVDRAEEE 277
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 234
+FIFDE + +LD + + + N I+LFLSN G + L
Sbjct: 278 EKIPLFIFDEAEHMHGEILDALWTLVTSRQANE---YMNAIYLFLSNLGQAHVTKHVL 332
>gi|296110154|ref|YP_003620535.1| hypothetical protein LKI_00115 [Leuconostoc kimchii IMSNU 11154]
gi|295831685|gb|ADG39566.1| hypothetical protein LKI_00115 [Leuconostoc kimchii IMSNU 11154]
Length = 632
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+S+ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ ++F G ++ +F+ S F SL R + + + + V A+
Sbjct: 342 TAKQLALNLF------GNAQNFIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAV 390
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 391 LLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|307180438|gb|EFN68464.1| Caseinolytic peptidase B protein-like protein [Camponotus
floridanus]
Length = 642
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 14/183 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LKQH+ GQE IS + ++ L G G GK + + + I
Sbjct: 290 LEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 349
Query: 132 FKRYKDK------GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
K +D + H+ I P QLT + +A + +FD
Sbjct: 350 HKDKRDSFIRLDMSEYQQKHEVAKLIGAPPGYVGHDDGGQLTKLLKKYPSA----VVLFD 405
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L +++ D + + I +N IF+ SN G EI ++LR E
Sbjct: 406 EVDKAHPDVLTILLQLFDEGRLTDGKGKTIECKNAIFVMTSNLGSEEIAEHAMQLRAEAE 465
Query: 242 RYI 244
R +
Sbjct: 466 RLL 468
>gi|71029588|ref|XP_764437.1| ATP-dependent Clp protease ATP-binding subunit [Theileria parva
strain Muguga]
gi|68351391|gb|EAN32154.1| ATP-dependent Clp protease ATP-binding subunit, putative [Theileria
parva]
Length = 900
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
+R +EE L + V GQE A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 564 IRNMEEDLHKMVIGQEEAVKNVCKAIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARAL 623
Query: 128 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + D H + + P QLT + SN ++ +
Sbjct: 624 TKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTEKVKSN----PYSVVM 679
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
FDE++K +L++++ ++ + + ISF+NTI + SN+G I +
Sbjct: 680 FDEIEKAHHDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRS 732
>gi|410909810|ref|XP_003968383.1| PREDICTED: caseinolytic peptidase B protein homolog [Takifugu
rubripes]
Length = 660
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 24/186 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 313 LERRLKEHIVGQEGAINTVASAIRRKQNGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 372
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDRA 180
K K D + H+ I P +E L +L + C A
Sbjct: 373 HKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGHLTKL---------LKECPNA 423
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FDEVDK +L +++ D + + I ++ +F+ SN EI L L
Sbjct: 424 VVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAVFIMTSNVASDEIAQHALHL 483
Query: 237 RKSGER 242
R+ E+
Sbjct: 484 RQETEQ 489
>gi|84997423|ref|XP_953433.1| endopeptidase (CLP homologue) ATP-binding chain [Theileria annulata
strain Ankara]
gi|65304429|emb|CAI76808.1| endopeptidase (CLP homologue) ATP-binding chain, putative
[Theileria annulata]
Length = 916
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
+R +EE L + V GQE A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 580 IRNMEEDLHKMVIGQEEAVKNVCKAIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARAL 639
Query: 128 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + D H + + P QLT + SN ++ +
Sbjct: 640 TKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTEKVKSN----PYSVVM 695
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
FDE++K +L++++ ++ + + ISF+NTI + SN+G I +
Sbjct: 696 FDEIEKAHHDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRS 748
>gi|339243907|ref|XP_003377879.1| chaperone protein ClpB [Trichinella spiralis]
gi|316973256|gb|EFV56876.1| chaperone protein ClpB [Trichinella spiralis]
Length = 408
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIF 132
EE++K+++ GQ+ AIS + A++ ++ L G G GK + + ++
Sbjct: 68 EERVKKNMIGQDGAISSVASAIRRRENGWTNDEHPLVFLFLGSSGVGKTELAKQVAQYLY 127
Query: 133 KRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
K K D + H+ I P Q + ++T C A+ +FDE
Sbjct: 128 KDNKKSFIRIDMSEYQEKHEVAKFIGSPP----GYVGHQQGGQLTKSLTECPNAVVLFDE 183
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
V+K +L +++ D + + + + IF+ SN EI + L+LRK
Sbjct: 184 VEKAHPDVLTIMLQLFDEGRLTDGMGKTVDCKEAIFIMTSNLAAEEIASHALKLRKE 240
>gi|449485970|ref|XP_002187730.2| PREDICTED: caseinolytic peptidase B protein homolog [Taeniopygia
guttata]
Length = 576
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G GK + I
Sbjct: 207 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSEKGKTELAKQTAKYI 266
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 267 HKDIK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLRQCPNAVVLF 321
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 322 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEA 381
>gi|406986498|gb|EKE07077.1| ATP-dependent Clp protease regulatory subunit [uncultured
bacterium]
Length = 918
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 45/253 (17%)
Query: 17 CISGITGEFF-----TLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFI------- 64
C++ +T +FF S I++ A + F+ N K N GE +
Sbjct: 557 CVT-LTDKFFFDQNLPASAISLLAEVGSFTR---NKKGQNSLVSGEDVAEVVAHKTGIPL 612
Query: 65 ------QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPG 117
+S + LE+++ + V GQ+LA+ + AL+ + +A L G G
Sbjct: 613 ASISENESQKLMRLEQEMHKRVIGQDLAVELVANALRRARAEMRSQKRPIANFLFLGPTG 672
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL------QLTNWII 171
GK +T I F G R + S N S+YRL Q T +
Sbjct: 673 VGKTELTKTIAEVYF-----GGEDRMIRMDMSEYQDTN----SIYRLIGQPGQQGTGLLT 723
Query: 172 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGT 227
V A+ + DE++K K +L++ + D +V I F NTI + SN+G +
Sbjct: 724 EAVRQNPFALVLLDELEKADKNVLNLFLQVFDDGRLTDSVGRVIDFTNTIIIATSNAGTS 783
Query: 228 EI---MNTFLELR 237
+ MN ++L
Sbjct: 784 YVQSQMNAGVDLE 796
>gi|348681222|gb|EGZ21038.1| hypothetical protein PHYSODRAFT_557277 [Phytophthora sojae]
Length = 366
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 54 GGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKA-LAIS 111
G G CT F+ + + + L+Q++ GQE A+ + GA++ F +A L ++
Sbjct: 5 GLGYQCT--FVDKPS-QAVRTHLQQNLKGQERAVESVVGAIEAWEFSRTSTKDRAPLVLA 61
Query: 112 LHGLPGTGKNYVTDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQ 165
+ G G GK +++ I ++FKR K +K + F N N ++ Y Q
Sbjct: 62 ITGPTGVGKTEMSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQ 121
Query: 166 LTNW--IISNVTACD-RAIFIFDEVDKFPKGLLDVIIPFIDH--------HAVYNQISFQ 214
+ + ++ C +A+ + DEV K LDV++ + H V I
Sbjct: 122 IKTRHELAEHLHHCSGKAVVVIDEVQKVIPHTLDVLMEAVSESSQFSYYKHGVTKNIDTA 181
Query: 215 NTIFLFLSNSGGTEIMNTFLELRKSGE 241
N IF+ +S+ G ++ ++ E
Sbjct: 182 NVIFVLVSDIGVADMEQVMIQYETREE 208
>gi|381336610|ref|YP_005174385.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356644576|gb|AET30419.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 632
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
+ ++F ++ F+ S F SL R + + + + V A+
Sbjct: 342 TAKQLALNLFGNKQN-----FIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAVL 391
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 444
>gi|421877587|ref|ZP_16309131.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C10]
gi|421879845|ref|ZP_16311299.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C11]
gi|372556601|emb|CCF25251.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C10]
gi|390446250|emb|CCF27419.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C11]
Length = 629
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 65 QSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+++ R+L QLK V GQ+ + I + N NTK + G G GK
Sbjct: 280 QTTDERLLNLSTQLKSRVIGQDHPLDKITMKITNREAGLGDNTKPESFLFLGPTGVGKTE 339
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ + +F G ++ +F+ S F SL R + N + + V A+
Sbjct: 340 TAKQLANLLF------GDAKSFIRFDMSEFKFAG---TSLERFK--NQLTTKVRHNPYAV 388
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG IMN
Sbjct: 389 LLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVIMTTNSGAKAIMN 442
>gi|332026312|gb|EGI66446.1| Caseinolytic peptidase B protein-like protein [Acromyrmex
echinatior]
Length = 609
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 14/183 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LKQH+ GQE +IS + ++ L G G GK + + + I
Sbjct: 256 LEQRLKQHIVGQEGSISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 315
Query: 132 FKRYKDK------GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ D + H+ I P QLT + +A + +FD
Sbjct: 316 HRNKSDSFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKLLKKYPSA----VVLFD 371
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L V++ D + + I +N IF+ SN G EI ++LR E
Sbjct: 372 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAEHAIQLRAEAE 431
Query: 242 RYI 244
R +
Sbjct: 432 RLL 434
>gi|116618213|ref|YP_818584.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097060|gb|ABJ62211.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 632
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
+ ++F ++ F+ S F SL R + + + + V A+
Sbjct: 342 TAKQLALNLFGNKQN-----FIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAVL 391
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 444
>gi|223993261|ref|XP_002286314.1| member of the clp superfamily, regulatory gamma subunit
[Thalassiosira pseudonana CCMP1335]
gi|220977629|gb|EED95955.1| member of the clp superfamily, regulatory gamma subunit
[Thalassiosira pseudonana CCMP1335]
Length = 782
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE + + V GQ+ A++ + A++ TK +A L G G GK + + +
Sbjct: 471 LEADIAKRVKGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPTGVGKTELCKALAQT 530
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
+ R KD S ++ +F+ SR+ +V QLT I ++ +FD
Sbjct: 531 YYGREKDIIRIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRK----PHSVVLFD 586
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
E++K + +L+V++ +D ++ + +SF+N IF+ SN G EI+
Sbjct: 587 ELEKAHEDVLNVLLQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEIL 635
>gi|339496405|ref|ZP_08657381.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc pseudomesenteroides KCTC 3652]
Length = 361
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 65 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 63 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 122
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ ++F G + +F+ S F SL R + + + + V A+
Sbjct: 123 TAKQLALNLF------GNKQNFIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAV 171
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 172 LLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 225
>gi|269114792|ref|YP_003302555.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
gi|268322417|emb|CAX37152.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
Length = 716
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 28/187 (14%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
Q + L E LK+ V GQ+ AI I A+K N + + L G G GK +
Sbjct: 416 QKQKILNLSETLKKRVKGQDQAIELISDAIKRSKANINDPNRPIGSFLFLGPTGVGKTEL 475
Query: 124 TDFIVSSIFK-----------RYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 171
+ ++F Y +K S+ + I + N QLT I
Sbjct: 476 AKSLAEALFDDENHIVRLDMSEYMEKHSVSKLIGSPPGYIGYDNGG-------QLTEKIR 528
Query: 172 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGT 227
N + I +FDE++K +L++++ +D+ + + ++F+NTI + SN G +
Sbjct: 529 QNPYS----IVLFDEIEKANSDVLNILLQILDNGTLTDSTGRVVNFKNTIIIMTSNIGSS 584
Query: 228 EIMNTFL 234
EI+N L
Sbjct: 585 EIINKSL 591
>gi|261752475|ref|ZP_05996184.1| ATP-dependent Clp protease [Brucella suis bv. 5 str. 513]
gi|261742228|gb|EEY30154.1| ATP-dependent Clp protease [Brucella suis bv. 5 str. 513]
Length = 651
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + C + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPHC---VLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|315453884|ref|YP_004074154.1| ATP-dependent CLP protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
gi|315132936|emb|CBY83564.1| ATP-dependent CLP protease ATP-binding subunit,Chaperone protein
clpB [Helicobacter felis ATCC 49179]
Length = 858
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K +Q RVL EE+L++ V GQE AI I A+K + +T+ + L G G
Sbjct: 553 KMLQEERERVLHIEEELRKSVVGQENAILAIAKAIKRNKAGLDDSTRPIGSFLFLGPTGV 612
Query: 119 GKNYVTDFIVSSIFKRYKD---KGTSRFVHKF-NSRIHFPNENHVSLYR-LQLTNWIISN 173
GK + +F K+ S ++ K SR+ +V QLT W
Sbjct: 613 GKTQSAKTLAKFLFDSQKNFIRLDMSEYMEKHAASRLVGAPPGYVGYEEGGQLTEW---- 668
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDH-HAVYN---QISFQNTIFLFLSNSGGTEI 229
V ++ +FDEV+K + ++++ +D H N ++ F+NTI + SN G +I
Sbjct: 669 VRRSPYSVILFDEVEKAHPDVFNLLLQVLDEGHLTDNKGVKVDFKNTIIILTSNIGSEKI 728
Query: 230 M 230
+
Sbjct: 729 I 729
>gi|56789242|gb|AAH88368.1| TOR3A protein [Homo sapiens]
gi|194389662|dbj|BAG61792.1| unnamed protein product [Homo sapiens]
gi|221040240|dbj|BAH14901.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLE 235
C + +FIFDE +K GLL+V+ P ++ A ++ TIFLFLSN G I L+
Sbjct: 11 CHQTLFIFDEAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLK 70
Query: 236 LRKSG 240
L K+G
Sbjct: 71 LLKAG 75
>gi|260811155|ref|XP_002600288.1| hypothetical protein BRAFLDRAFT_118278 [Branchiostoma floridae]
gi|229285574|gb|EEN56300.1| hypothetical protein BRAFLDRAFT_118278 [Branchiostoma floridae]
Length = 275
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 134 RYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDEVDKFPK 192
R +D+ HKF HFP+ YR Q+ +W+ NV+ DR +F+FDE++
Sbjct: 6 RKRDQSCGVRAHKFIILDHFPHPGEAWQYREQVRDWVRGNVSHSDRQHLFVFDEMETVYP 65
Query: 193 GLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
L + ++ ++ NT+F+F+
Sbjct: 66 SLAEGLLSLLEEDT-------SNTMFIFI 87
>gi|292621865|ref|XP_002664799.1| PREDICTED: caseinolytic peptidase B protein homolog, partial [Danio
rerio]
Length = 409
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
EA + + LE +LK+H+ GQE AI+ + A++ Y L G
Sbjct: 34 AEAQRKREAEERRKFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGS 93
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI----- 170
G GK + + + K K KG R F ++ V+ + ++
Sbjct: 94 SGIGKTELAKQVARYMHKDIK-KGFIRM-----DMSEFQEKHEVAKFIGSPPGYVGHDEG 147
Query: 171 ---ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 223
+ A+ +FDEV+K +L V++ D + + I ++ IF+ SN
Sbjct: 148 GQLTKQLKQSPSAVVLFDEVEKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAIFIMTSN 207
Query: 224 SGGTEIMNTFLELRKSGE 241
+ EI L+LR+ +
Sbjct: 208 AASDEIAQHALQLRQEAQ 225
>gi|345486795|ref|XP_001607140.2| PREDICTED: caseinolytic peptidase B protein homolog [Nasonia
vitripennis]
Length = 631
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LKQ + GQE AIS + ++ L G G GK + + + I
Sbjct: 279 LEQRLKQFIVGQEGAISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 338
Query: 132 FKRYKDK------GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ D + H+ I P QLT + + +A + +FD
Sbjct: 339 HRNKPDSFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKLLRKSPSA----VVLFD 394
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L V++ D + + I ++ IF+ SN EI ++LR+ E
Sbjct: 395 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFIMTSNLASEEIAEHAMQLREEAE 454
Query: 242 RYIT 245
R +T
Sbjct: 455 RLLT 458
>gi|261755133|ref|ZP_05998842.1| ATP-dependent Clp protease [Brucella suis bv. 3 str. 686]
gi|261744886|gb|EEY32812.1| ATP-dependent Clp protease [Brucella suis bv. 3 str. 686]
Length = 365
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 5 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 64
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + C + + DE++K
Sbjct: 65 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPHC---VLLLDEIEK 121
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 122 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGDD 181
Query: 243 YITIH 247
I+
Sbjct: 182 MEAIN 186
>gi|428171251|gb|EKX40169.1| hypothetical protein GUITHDRAFT_113649 [Guillardia theta CCMP2712]
Length = 403
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 102 YHNTKALA-----ISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKF-------NS 149
Y N +AL + G G GK+ D + SS+F R+ +R KF +S
Sbjct: 106 YENPQALKARPLFMHFSGPTGVGKSLTADIVASSMFNRHN--ADNRLCGKFILQMRAYSS 163
Query: 150 RIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID 203
R F H+ Y + + ++ C R++ IFDE+ + LLD II D
Sbjct: 164 RNPF----HLEKYEQDIRRKVGEQLSHCPRSVLIFDEIQSISEQLLDSIIEIFD 213
>gi|91080595|ref|XP_973935.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
(Suppressor of potassium transport defect 3) [Tribolium
castaneum]
gi|270005512|gb|EFA01960.1| hypothetical protein TcasGA2_TC007578 [Tribolium castaneum]
Length = 593
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 14/180 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LEE+LK + GQE AI+ + ++ + L G G GK + + + I
Sbjct: 240 LEERLKTRIVGQEGAITIVSATIRRKENGWGDDEHPLVFLFLGSSGIGKTELAKQLAAYI 299
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
K D + H+ I P QLT S + C A+ +FD
Sbjct: 300 HKEKPQAFIRLDMSEYQEKHEVAKLIGAPPGYIGHDEGGQLT----SRLKQCPNAVVLFD 355
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L V++ D + + I +N IF+ SN EI L+LR+ E
Sbjct: 356 EVDKAHPDVLTVLLQLFDEGRLTDGHGKTIECKNAIFIMTSNLASDEIAQHGLKLRQEIE 415
>gi|307107907|gb|EFN56148.1| hypothetical protein CHLNCDRAFT_51790 [Chlorella variabilis]
Length = 389
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L + GQELA+ I A+ +H + + L +SLHG PG GK+ ++
Sbjct: 35 LEPFLSSQMVGQELALRQISDAICDHLAQQ-EPRRPLVLSLHGPPGVGKSMFHHLAAQAL 93
Query: 132 FKR-----YKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ R + G +K + + E + L L ++ ++ ++ + +E
Sbjct: 94 YNRRIHDALRCPGLDCAGYKVLYGMDYTAEERQRQHTL-LRAALLEHLRQAPESLLVVEE 152
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
DK + +++ V N +S I + SN G TE+ + L ++G+R
Sbjct: 153 YDKLDCPMRGFFRQLLENGQVAN-VSLNKAIVVLESNLGYTELHDLLL---RAGDR 204
>gi|386338816|ref|YP_006034985.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334281452|dbj|BAK29026.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 610
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
L E+LK+ V GQ+ AIS I A+ K ++ L G G GK ++ + +
Sbjct: 289 LTEKLKRRVKGQDEAISAIVDAITIAQAGLQDENKPISSFLFLGPTGVGKTELSKAVAEA 348
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN---WIISNVTACDRAIFIFDEV 187
+F D T+ +F+ + E+ V + T + +V ++ + DEV
Sbjct: 349 LF----DDETAMI--RFDMSEYKQKEDVVKFIGDRATRTKGQLTESVKQKPYSVLLLDEV 402
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
+K ++D+ + +D + + ISF+NTI + +N G +I+N
Sbjct: 403 EKAHSEVMDIFLQVLDDGRLTDSTGRVISFKNTIVIMTTNIGAQKIIN 450
>gi|322378503|ref|ZP_08052953.1| ATP-dependent C1p protease (clpA) [Helicobacter suis HS1]
gi|321149064|gb|EFX43514.1| ATP-dependent C1p protease (clpA) [Helicobacter suis HS1]
Length = 741
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 63 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKN 121
F + ++++ LEEQ+K+ V QE+AIS + A+K H K +A L G G GK
Sbjct: 428 FEKKNHLKNLEEQIKKEVFAQEIAISKLVSAIKIHASGLIATKKPVASFLFVGPSGVGKT 487
Query: 122 YVTDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+ + + +R+ D + H + I P+ + +I+ +
Sbjct: 488 ELAKVLAKHMHLHLERF-DMSEYKEAHSISKLIGAPS----GYVGFEQGGLLINAIRKHP 542
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT-F 233
R + + DE++K + D+++ D+ ++ + + F + I + SN+G + F
Sbjct: 543 RCVLLLDEIEKAHPNIYDLLLQITDNASLTDNSGKKGDFSHAILILTSNAGSDALGQMGF 602
Query: 234 LE 235
LE
Sbjct: 603 LE 604
>gi|307212388|gb|EFN88178.1| Caseinolytic peptidase B protein-like protein [Harpegnathos
saltator]
Length = 502
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 36/194 (18%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LKQH+ GQE IS + ++ L G G GK + + + I
Sbjct: 193 LEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 252
Query: 132 FKRYKDKGTSRFVHKFNSRIHFP----NENHVSLYRL-------------QLTNWIISNV 174
K +K NS I E H + + QLT +
Sbjct: 253 HK-----------NKTNSFIRLDMSEYQEKHEAAKLIGAPPGYIGHDSGGQLTKLL---- 297
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
C A+ +FDEVDK +L V++ D + + I + IF+ SN G EI
Sbjct: 298 KQCPTAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKEAIFIMTSNLGNKEIA 357
Query: 231 NTFLELRKSGERYI 244
++LR + +
Sbjct: 358 EHAIQLRAESAKLL 371
>gi|74221355|dbj|BAE42156.1| unnamed protein product [Mus musculus]
Length = 159
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 53
>gi|322380162|ref|ZP_08054401.1| ATP-dependent C1p protease [Helicobacter suis HS5]
gi|321147413|gb|EFX42074.1| ATP-dependent C1p protease [Helicobacter suis HS5]
Length = 741
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 63 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKN 121
F + ++++ LEEQ+K+ V QE+AIS + A+K H K +A L G G GK
Sbjct: 428 FEKKNHLKNLEEQIKKEVFAQEIAISKLVSAIKIHASGLIATKKPVASFLFVGPSGVGKT 487
Query: 122 YVTDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+ + + +R+ D + H + I P+ + +I+ +
Sbjct: 488 ELAKVLAKHMHLHLERF-DMSEYKEAHSISKLIGAPS----GYVGFEQGGLLINAIRKHP 542
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT-F 233
R + + DE++K + D+++ D+ ++ + + F + I + SN+G + F
Sbjct: 543 RCVLLLDEIEKAHPNIYDLLLQITDNASLTDNSGKKGDFSHAILILTSNAGSDALGQMGF 602
Query: 234 LE 235
LE
Sbjct: 603 LE 604
>gi|297171835|gb|ADI22825.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Oceanospirillales bacterium HF0500_29K23]
Length = 735
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
+E+++ + V GQ A+ +C AL+ + + + A + G G GK + + +
Sbjct: 418 MEKEISKIVVGQSSAVETLCKALRRSRADLKDPARPIGAFMMLGPTGVGKTLLAKSLAVN 477
Query: 131 IFKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 185
+F K S ++ KFN SR+ +V QLT + N ++ +FD
Sbjct: 478 MFGDSKSLVQLDMSEYMEKFNVSRLVGSPPGYVGYEEGGQLTEKVRRNPY----SVVLFD 533
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
EV+K ++++++ ++ + + Q+ F+NTI L SN G +
Sbjct: 534 EVEKAHPDVMNMLLQILEEGKLTDSFGRQVDFRNTIILLTSNVGAERL 581
>gi|344251575|gb|EGW07679.1| Torsin-2A [Cricetulus griseus]
Length = 159
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 53
>gi|429329887|gb|AFZ81646.1| ATP-dependent Clp protease ATP-binding subunit, putative [Babesia
equi]
Length = 907
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGAL---KNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
+R +E +L + + GQ+ A+ +IC A+ K H +N + G PG GK+ V
Sbjct: 576 IRNMESELHKMIVGQDEAVKNICKAIRRAKTHIKNPQRPIGSFLFC--GPPGVGKSEVAK 633
Query: 126 FIVSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ IF + D H + + P QLT I N ++
Sbjct: 634 SLTKYIFAKENLIRVDMSEYSESHSISRILGSPPGYKGHDSGGQLTEKIRHN----PYSV 689
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG------GTEIMN 231
+FDE++K +L++++ ++ V + +SF+NTI + SN G +++ N
Sbjct: 690 IMFDEIEKAHSDILNILLQILEDGNVTDAKNQMVSFKNTIIIMTSNLGSNVIQRASKVSN 749
Query: 232 TF 233
TF
Sbjct: 750 TF 751
>gi|26386009|dbj|BAC25585.1| unnamed protein product [Mus musculus]
Length = 111
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 105 TKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR 163
+K L +SLHG GTGK+YV+ + +F +D S VH F+ IHFP+ + Y+
Sbjct: 56 SKPLVLSLHGWTGTGKSYVSSLLAQHLF---RDGLRSPHVHHFSPIIHFPHPSRTEQYK 111
>gi|354721138|ref|NP_001238947.1| prosalusin isoform f [Homo sapiens]
gi|354721147|ref|NP_001238950.1| prosalusin isoform f [Homo sapiens]
gi|395740999|ref|XP_002820288.2| PREDICTED: torsin-2A [Pongo abelii]
gi|410043203|ref|XP_003951579.1| PREDICTED: prosalusin [Pan troglodytes]
gi|441622996|ref|XP_004088877.1| PREDICTED: prosalusin [Nomascus leucogenys]
gi|119608096|gb|EAW87690.1| torsin family 2, member A, isoform CRA_a [Homo sapiens]
Length = 159
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 53
>gi|307194953|gb|EFN77059.1| Torsin-like protein [Harpegnathos saltator]
gi|307202047|gb|EFN81595.1| Torsin-like protein [Harpegnathos saltator]
Length = 174
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 190 FPKGLLDVIIPFIDHHAV-----YNQISFQN-TIFLFLSNSGGTEIMNTFLELRKSGER 242
P+GLL+V++PF+D+H+ Y++ QN IF+FLSN+G +I+ L + G++
Sbjct: 1 MPEGLLNVLVPFLDYHSYRKSSKYSESIHQNKAIFIFLSNTGSAQIVRHLFSLWERGKK 59
>gi|442760143|gb|JAA72230.1| Hypothetical protein [Ixodes ricinus]
Length = 609
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 25/189 (13%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+++KQ + GQE AI+ + ++ + + L G G GK + + +
Sbjct: 249 LEQRVKQVIVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQLAEYL 308
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL--------------QLTNWIISNVTAC 177
+ KGT + + + + E H + +L QLT + C
Sbjct: 309 HGDKRGKGTKKGFIRLDMSEY--QEKH-EVAKLIGSPPGYVGHDDGGQLTR----RLREC 361
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 233
A+ + DEVDK +L V++ D + + I ++ IF+ SN EI
Sbjct: 362 PTAVVLLDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIVCKDAIFVMTSNLASDEIAQHA 421
Query: 234 LELRKSGER 242
ELR+ ER
Sbjct: 422 TELRREVER 430
>gi|373489018|ref|ZP_09579681.1| ATPase AAA-2 domain protein [Holophaga foetida DSM 6591]
gi|372004494|gb|EHP05133.1| ATPase AAA-2 domain protein [Holophaga foetida DSM 6591]
Length = 816
Score = 44.7 bits (104), Expect = 0.039, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+ N+ +E +L + V GQE A+S + A++ + + + L G G GK +
Sbjct: 494 EKQNLVQMETRLNERVIGQEPAVSAVSRAVRRARTGLKNPNRPMGSFLFLGPTGVGKTEL 553
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVS--------LYRLQLTNWIISNVT 175
+ + +F G + +H+F+ F ++ VS + + V
Sbjct: 554 AKTLATFLF------GDPKKMHRFDMS-EFMEKHEVSKLLGAPPGYVGYEEGGLLTDRVR 606
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIM 230
+ +FDEV+K L+++++ D A NQ+ F+NTI + SN G E++
Sbjct: 607 RNPYCVLLFDEVEKAHPDLINILLQIFDDGIATDAFGNQVDFKNTIIIMTSNVGSRELL 665
>gi|241120636|ref|XP_002402954.1| suppressor of potassium transport defect, putative [Ixodes
scapularis]
gi|215493368|gb|EEC03009.1| suppressor of potassium transport defect, putative [Ixodes
scapularis]
Length = 609
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 25/189 (13%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE+++KQ + GQE AI+ + ++ + + L G G GK + + +
Sbjct: 249 LEQRVKQVIVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQLAEYL 308
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL--------------QLTNWIISNVTAC 177
+ KGT + + + + E H + +L QLT + C
Sbjct: 309 HGDKRGKGTKKGFIRLDMSEY--QEKH-EVAKLIGSPPGYVGHDDGGQLTR----RLREC 361
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 233
A+ + DEVDK +L V++ D + + I ++ IF+ SN EI
Sbjct: 362 PTAVVLLDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIVCKDAIFVMTSNLASDEIAQHA 421
Query: 234 LELRKSGER 242
ELR+ ER
Sbjct: 422 TELRREVER 430
>gi|17987099|ref|NP_539733.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
melitensis bv. 1 str. 16M]
gi|23502047|ref|NP_698174.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
1330]
gi|62290082|ref|YP_221875.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. 9-941]
gi|82700007|ref|YP_414581.1| chaperonin ClpA/B [Brucella melitensis biovar Abortus 2308]
gi|161619120|ref|YP_001593007.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
ATCC 23365]
gi|189024320|ref|YP_001935088.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus S19]
gi|225627637|ref|ZP_03785674.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella ceti
str. Cudo]
gi|225852666|ref|YP_002732899.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
melitensis ATCC 23457]
gi|237815588|ref|ZP_04594585.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus str. 2308 A]
gi|256263840|ref|ZP_05466372.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 2 str. 63/9]
gi|260546632|ref|ZP_05822371.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus NCTC 8038]
gi|260565576|ref|ZP_05836060.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 1 str. 16M]
gi|260566298|ref|ZP_05836768.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
bv. 4 str. 40]
gi|260754910|ref|ZP_05867258.1| ATP-dependent Clp protease [Brucella abortus bv. 6 str. 870]
gi|260758127|ref|ZP_05870475.1| ATP-dependent Clp protease [Brucella abortus bv. 4 str. 292]
gi|260761953|ref|ZP_05874296.1| ATP-dependent Clp protease [Brucella abortus bv. 2 str. 86/8/59]
gi|260883922|ref|ZP_05895536.1| ATP-dependent Clp protease [Brucella abortus bv. 9 str. C68]
gi|261214162|ref|ZP_05928443.1| ATP-dependent Clp protease [Brucella abortus bv. 3 str. Tulya]
gi|261222335|ref|ZP_05936616.1| ATP-dependent Clp protease [Brucella ceti B1/94]
gi|261314111|ref|ZP_05953308.1| ATP-dependent Clp protease [Brucella pinnipedialis M163/99/10]
gi|261317802|ref|ZP_05956999.1| ATP-dependent Clp protease [Brucella pinnipedialis B2/94]
gi|261758358|ref|ZP_06002067.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella sp.
F5/99]
gi|265988833|ref|ZP_06101390.1| ATP-dependent Clp protease [Brucella pinnipedialis M292/94/1]
gi|265991248|ref|ZP_06103805.1| ATP-dependent Clp protease [Brucella melitensis bv. 1 str. Rev.1]
gi|265995084|ref|ZP_06107641.1| ATP-dependent Clp protease [Brucella melitensis bv. 3 str. Ether]
gi|265998299|ref|ZP_06110856.1| ATP-dependent Clp protease [Brucella ceti M490/95/1]
gi|297248479|ref|ZP_06932197.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 5 str. B3196]
gi|340790786|ref|YP_004756251.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
pinnipedialis B2/94]
gi|376273103|ref|YP_005151681.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus A13334]
gi|376276222|ref|YP_005116661.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
HSK A52141]
gi|376280841|ref|YP_005154847.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
VBI22]
gi|384211534|ref|YP_005600616.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis M5-90]
gi|384224835|ref|YP_005615999.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|384408640|ref|YP_005597261.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis M28]
gi|384445225|ref|YP_005603944.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis NI]
gi|423166732|ref|ZP_17153435.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI435a]
gi|423170894|ref|ZP_17157569.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI474]
gi|423173024|ref|ZP_17159695.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI486]
gi|423178283|ref|ZP_17164927.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI488]
gi|423180324|ref|ZP_17166965.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI010]
gi|423183456|ref|ZP_17170093.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI016]
gi|423185604|ref|ZP_17172218.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI021]
gi|423188739|ref|ZP_17175349.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI259]
gi|9542862|emb|CAC00480.1| ClpA protein [Brucella suis]
gi|17982760|gb|AAL51997.1| ATP-dependent clp protease ATP-binding subunit clpa [Brucella
melitensis bv. 1 str. 16M]
gi|23348002|gb|AAN30089.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|62196214|gb|AAX74514.1| ClpA, ATP-dependent Clp protease, ATP-binding subunit ClpA
[Brucella abortus bv. 1 str. 9-941]
gi|82616108|emb|CAJ11147.1| Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):AAA
ATPase:AAA ATPase, central region:Clp, N terminal
[Brucella melitensis biovar Abortus 2308]
gi|161335931|gb|ABX62236.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
ATCC 23365]
gi|189019892|gb|ACD72614.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus S19]
gi|225617642|gb|EEH14687.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella ceti
str. Cudo]
gi|225641031|gb|ACO00945.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis ATCC 23457]
gi|237788886|gb|EEP63097.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus str. 2308 A]
gi|260095682|gb|EEW79559.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus NCTC 8038]
gi|260151644|gb|EEW86738.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 1 str. 16M]
gi|260155816|gb|EEW90896.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
bv. 4 str. 40]
gi|260668445|gb|EEX55385.1| ATP-dependent Clp protease [Brucella abortus bv. 4 str. 292]
gi|260672385|gb|EEX59206.1| ATP-dependent Clp protease [Brucella abortus bv. 2 str. 86/8/59]
gi|260675018|gb|EEX61839.1| ATP-dependent Clp protease [Brucella abortus bv. 6 str. 870]
gi|260873450|gb|EEX80519.1| ATP-dependent Clp protease [Brucella abortus bv. 9 str. C68]
gi|260915769|gb|EEX82630.1| ATP-dependent Clp protease [Brucella abortus bv. 3 str. Tulya]
gi|260920919|gb|EEX87572.1| ATP-dependent Clp protease [Brucella ceti B1/94]
gi|261297025|gb|EEY00522.1| ATP-dependent Clp protease [Brucella pinnipedialis B2/94]
gi|261303137|gb|EEY06634.1| ATP-dependent Clp protease [Brucella pinnipedialis M163/99/10]
gi|261738342|gb|EEY26338.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella sp.
F5/99]
gi|262552767|gb|EEZ08757.1| ATP-dependent Clp protease [Brucella ceti M490/95/1]
gi|262766197|gb|EEZ11986.1| ATP-dependent Clp protease [Brucella melitensis bv. 3 str. Ether]
gi|263002032|gb|EEZ14607.1| ATP-dependent Clp protease [Brucella melitensis bv. 1 str. Rev.1]
gi|263093971|gb|EEZ17905.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 2 str. 63/9]
gi|264661030|gb|EEZ31291.1| ATP-dependent Clp protease [Brucella pinnipedialis M292/94/1]
gi|297175648|gb|EFH34995.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 5 str. B3196]
gi|326409187|gb|ADZ66252.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis M28]
gi|326538897|gb|ADZ87112.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis M5-90]
gi|340559245|gb|AEK54483.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
pinnipedialis B2/94]
gi|343383015|gb|AEM18507.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|349743216|gb|AEQ08759.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis NI]
gi|358258440|gb|AEU06175.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
VBI22]
gi|363400709|gb|AEW17679.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus A13334]
gi|363404789|gb|AEW15084.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
HSK A52141]
gi|374539472|gb|EHR10976.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI474]
gi|374542963|gb|EHR14447.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI435a]
gi|374543579|gb|EHR15061.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI486]
gi|374545522|gb|EHR16983.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI488]
gi|374548888|gb|EHR20335.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI010]
gi|374549519|gb|EHR20962.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI016]
gi|374558397|gb|EHR29790.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI259]
gi|374559695|gb|EHR31080.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI021]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|407001910|gb|EKE18798.1| hypothetical protein ACD_9C00232G0001, partial [uncultured
bacterium]
Length = 436
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE L + V GQ+ AI + GAL+ ++ K + L G G GK T ++
Sbjct: 150 LEALLHRQVIGQDEAIKQVSGALRRARSGIGNSDKPVGSFLFLGPTGVGKTE-TAKALAK 208
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
I+ +DK + +F + P+ + + RL +++ + ++ + DE++
Sbjct: 209 IYFGSEDKMIRLDMSEFQT----PDSIDRLLGSSRLDQQGRLVTQIKDNPYSLLLLDEIE 264
Query: 189 KFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
K +LD+ + +D A N+ISF+NT+ + SN+G ++ ++ + S E
Sbjct: 265 KAYPEILDIFLQILDEGYVNDAFGNKISFRNTMIIATSNAGAA-VIKEMIQQKNSPE 320
>gi|306841892|ref|ZP_07474572.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
BO2]
gi|306288022|gb|EFM59424.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
BO2]
Length = 779
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 419 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 478
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 479 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 535
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 536 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 594
>gi|306844033|ref|ZP_07476628.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
inopinata BO1]
gi|306275788|gb|EFM57512.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
inopinata BO1]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|261325258|ref|ZP_05964455.1| ATP-dependent Clp protease [Brucella neotomae 5K33]
gi|261301238|gb|EEY04735.1| ATP-dependent Clp protease [Brucella neotomae 5K33]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|256369594|ref|YP_003107104.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
microti CCM 4915]
gi|255999756|gb|ACU48155.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
microti CCM 4915]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|265984226|ref|ZP_06096961.1| ATP-dependent Clp protease [Brucella sp. 83/13]
gi|306837980|ref|ZP_07470838.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
NF 2653]
gi|264662818|gb|EEZ33079.1| ATP-dependent Clp protease [Brucella sp. 83/13]
gi|306406904|gb|EFM63125.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
NF 2653]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|261219516|ref|ZP_05933797.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261322011|ref|ZP_05961208.1| ATP-dependent Clp protease [Brucella ceti M644/93/1]
gi|260924605|gb|EEX91173.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261294701|gb|EEX98197.1| ATP-dependent Clp protease [Brucella ceti M644/93/1]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|163843433|ref|YP_001627837.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella suis
ATCC 23445]
gi|163674156|gb|ABY38267.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella suis
ATCC 23445]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|148559573|ref|YP_001259087.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella ovis
ATCC 25840]
gi|148370830|gb|ABQ60809.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella ovis
ATCC 25840]
Length = 824
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L Q V GQ+ AIS I A+ +N R H + G G GK + + +
Sbjct: 505 LEKELHQRVIGQDEAISAISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNILLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|407003410|gb|EKE19983.1| ATPase AAA-2 protein [uncultured bacterium]
Length = 816
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 64 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNY 122
I+ + LE L + V GQ+ AIS + AL+ ++ K + L G G GK
Sbjct: 522 IERKKLMNLEALLHRQVIGQDEAISQVSSALRRARAGVGNSEKPVGSFLFLGPTGVGKTE 581
Query: 123 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW--IISNVTACDRA 180
+ F + + S PN L QL ++S + +
Sbjct: 582 TAKALAKVYFG-----SVDKMIRLDMSEFQTPNSIDRLLGSSQLNQQGRLVSQIKDNPYS 636
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEI 229
+ + DE++K +LD+ + +D A N+ISF+NT+ + SN+G + I
Sbjct: 637 LLLLDEIEKAYPEILDIFLQILDEGFVNDAFGNRISFRNTMIIATSNAGSSLI 689
>gi|328723476|ref|XP_001943960.2| PREDICTED: caseinolytic peptidase B protein homolog [Acyrthosiphon
pisum]
Length = 589
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 16/177 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LKQ + GQE AI+ + A++ + L G G GK + I S +
Sbjct: 259 LELRLKQKIIGQENAINEVSSAIRRKENGWTDDEHPLVFLFLGSSGIGKTELAKQIASYL 318
Query: 132 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K KD G R H+ I P ++ + A+ +F
Sbjct: 319 HKNNKD-GFIRLDMSEYQEKHEVAKMIGSP----PGYVGYDDGGYLTKQLAKNPNAVVLF 373
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 237
DEV+K +L +++ D + + I +N IF+ SN EI LELR
Sbjct: 374 DEVEKAHTDILTILLQLFDEGRITDGKGKTIVCKNAIFVMTSNLASEEIAEHALELR 430
>gi|410500555|ref|YP_006938879.1| hypothetical protein SAP020A_016 [Staphylococcus sp. CDC3]
gi|281334507|gb|ADA61591.1| hypothetical protein SAP020A_016 [Staphylococcus sp. CDC3]
Length = 618
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 57 EACTDKFIQSS---------NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
EA DK I SS N+ +E+ +++ V+GQ+LAI + L T+
Sbjct: 242 EALLDKRIYSSIGIDPKFRVNIDQIEKSMRERVYGQDLAIETLVDNLNVTVAGLSDPTRP 301
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
+ G G GK + + ++ G + +++ + E V + +++
Sbjct: 302 SSFMFLGPTGVGKTEIAKAMGEGLY------GDEEVLERYDMS-EYQTEADVEKFIHKIS 354
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 223
+ + + I +FDE++K +G++D+ + +D + N Q++F+N + SN
Sbjct: 355 DAVWNRPF----GIRLFDEIEKAHRGVMDLFLQILDDGRLENRYGRQVNFRNCYIIMTSN 410
Query: 224 SG 225
G
Sbjct: 411 IG 412
>gi|298713429|emb|CBJ33632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 484
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 74/191 (38%), Gaps = 22/191 (11%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
V L+ + Q LA+ + GAL + H+ + + L ++L G GTGK +
Sbjct: 64 VEAARRALQDGILAQPLALESLDGALSSWHYSRQSDRYEPLVVALTGSTGTGKTETAWVL 123
Query: 128 VSSIF-KRYKDKGTSRFVHK-------FNSRIHFPNENHVSLYRLQLTNWIISNVTAC-D 178
++ KR + G +R + + + + E + SL R +L + C
Sbjct: 124 ADALLTKRCRITGGTRDIPRGLLVLNGADYMVAAKVEEYQSLIRRKLGQ----RLEYCGG 179
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN--------QISFQNTIFLFLSNSGGTEIM 230
+ +FDE+ K G LD + + H + +FL +S+ G +
Sbjct: 180 NVVVLFDELQKAAPGTLDALAEAMSEHPRVTFERGGQNVSVDSSRVVFLLVSDVGAEGVN 239
Query: 231 NTFLELRKSGE 241
L RK +
Sbjct: 240 AAVLRYRKRSD 250
>gi|403223616|dbj|BAM41746.1| endopeptidase ATP-binding subunit [Theileria orientalis strain
Shintoku]
Length = 895
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
+R +E+ + + V GQ+ A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 550 IRHMEDDIHKMVIGQDEAVKNVCKAIRRAKTNIKNPHRPIGSFLFCGPPGVGKSEVARSL 609
Query: 128 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + D + H + + P QLT + +N ++ +
Sbjct: 610 TKYLFAKENLIRIDMSEYKEPHSISRILGSPPGYKGHDTGGQLTEKVKNNPY----SVVM 665
Query: 184 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNT 232
FDE++K +L++++ ++ A +SF+NTI + SN+G I +
Sbjct: 666 FDEIEKAHHDVLNILLQILEDGKLTDAKNQTVSFKNTIIIMTSNTGSNVIQRS 718
>gi|282860238|ref|ZP_06269309.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|424899253|ref|ZP_18322799.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
gi|282586971|gb|EFB92205.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|388593467|gb|EIM33705.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
Length = 863
Score = 43.9 bits (102), Expect = 0.065, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
+ +QS ++L E++L Q V GQE AI+ + A++ K +A + G GT
Sbjct: 549 RMMQSEREKLLHLEDELHQRVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGT 608
Query: 119 GKNYVTDFIVSSIFK---RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISN 173
GK + + +F S + KF+ SR+ +V QLT
Sbjct: 609 GKTELAKALADYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLT----EA 664
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
V ++ +FDE++K + ++++ +D + + ++F+NTI + SN G I
Sbjct: 665 VRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYI 724
Query: 230 MNTFLELRK 238
F ELR+
Sbjct: 725 QQQFQELRE 733
>gi|332653965|ref|ZP_08419709.1| Clp protease, ATP-binding subunit ClpC [Ruminococcaceae bacterium
D16]
gi|332517051|gb|EGJ46656.1| Clp protease, ATP-binding subunit ClpC [Ruminococcaceae bacterium
D16]
Length = 768
Score = 43.9 bits (102), Expect = 0.067, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LEE+LK+H+ GQ+ A+ + A++ K ++ G G GK + + +
Sbjct: 471 LEERLKKHIIGQDEAVKAVVAAIRRGRVGISPKHKPVSFIFVGSTGVGKTELVKQLAQDL 530
Query: 132 FKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 186
F + S F+ K+ SRI +V QLT I ++ +FDE
Sbjct: 531 FHAPESLIRLDMSEFMEKYAVSRIIGSPPGYVGYDEAGQLTEKIRRK----PYSVVLFDE 586
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
++K +L++++ +D + + +++F+NT+ + SN+G
Sbjct: 587 IEKAHPDVLNILLQILDDGHITDAHGRKVNFENTVIIMTSNAG 629
>gi|325179639|emb|CCA14037.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 434
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%)
Query: 76 LKQHVHGQELAISHICGALKN-HFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSSIFK 133
L +H+ Q LA+ I A++ F + L ++ G GTGK + + SIFK
Sbjct: 78 LTEHIIAQHLAVESIIAAIEAWEFARPTAKDRIPLVLAFTGPTGTGKTETSYVLARSIFK 137
Query: 134 RYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQLTNWIISNVTACD-RAIFIFDE 186
+ DK + + N N V+ Y + + ++ ++ C AI +FDE
Sbjct: 138 HTRNLYKSDKKVASGLLMIRGEDFSDNFTNPVTTYHRLIKSMLVDHLIHCSGNAIVVFDE 197
Query: 187 VDKFPKGLLDVIIPFIDHHA--------VYNQISFQNTIFLFLSNSGGTEIM 230
V K LDV++ + + A V + + N IF+ +S+ G +++M
Sbjct: 198 VQKVIPHTLDVLMEAMSNSAQLSYTVGGVTSTLDTSNVIFILISDIGVSQMM 249
>gi|88607130|ref|YP_505053.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Anaplasma
phagocytophilum HZ]
gi|88598193|gb|ABD43663.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Anaplasma
phagocytophilum HZ]
Length = 773
Score = 43.5 bits (101), Expect = 0.076, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
VR LE+ LK+ + GQ+ AI+H+ A++ + K LA L P G GK +
Sbjct: 463 VRDLEDNLKKVIFGQDEAITHVVDAIRIAKAGMRSSQKPLACYLFAGPTGVGKTELVRQF 522
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S +V SR+ +V + L + ++ ++ + DE
Sbjct: 523 AKCMGMKLIRFDMSEYVESHTVSRMIGSPPGYVGYEQGGL---LTDAISRNQYSVLLLDE 579
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K L ++++ +D+ + + ++SF+N + + +N+G E+
Sbjct: 580 IEKAHSSLYNILLQIMDYGYITDTYGKKVSFRNVVIILTTNAGAMEL 626
>gi|257064193|ref|YP_003143865.1| ATPase [Slackia heliotrinireducens DSM 20476]
gi|256791846|gb|ACV22516.1| ATPase family protein associated with various cellular activities
(AAA) [Slackia heliotrinireducens DSM 20476]
Length = 632
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 73 EEQLKQHVHGQELAISHICGALKNH---FQNRYHNTKALA---ISLHGLPGTGKNYVTDF 126
EE+L++ V GQ+ A+S I LK F H++ + + L G GTGK V
Sbjct: 309 EEKLRRRVKGQDRALSKIVTVLKRSVMGFSGMQHSSGSKPKGVLFLAGPTGTGKTEVVKA 368
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL-----------QLTNWIISNVT 175
+ +F G R +F+ + + L+ QLTN + +N
Sbjct: 369 VTELLF------GDERSYLRFDMSEYASENSDQKLFGAPPGYVGYEEGGQLTNAVKANPF 422
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 228
++ +FDEV+K ++D + ++ + N + F T+ F SN G +E
Sbjct: 423 ----SVLLFDEVEKAHPSIMDKFLQILEDGRMTDGQGNTVYFSETLIFFTSNVGISE 475
>gi|294852508|ref|ZP_06793181.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella sp.
NVSL 07-0026]
gi|294821097|gb|EFG38096.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella sp.
NVSL 07-0026]
Length = 824
Score = 43.5 bits (101), Expect = 0.083, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMESHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH A+ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|390333832|ref|XP_003723787.1| PREDICTED: uncharacterized protein LOC100892342 [Strongylocentrotus
purpuratus]
Length = 609
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ L+ HV+GQ + +S + L + + + + HG G GK +V + I +
Sbjct: 314 LQTILQSHVYGQPIVVSLLPQLLSGILAEDVSD-RTMVLMFHGQSGVGKTFVAELIGKKM 372
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT-----NWIISNVTACDRAIFIFDE 186
F ++ S+ VHKF + V+ Y + + SN C ++I ++
Sbjct: 373 F---PEQAQSQCVHKFLPSFLEVRDRLVTTYDYSIAFEDFIDQGKSNYRTCPVGLYIIED 429
Query: 187 VD-KFPKGLLDVI---IPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
+D + LL+ I +P I + Q IF ++N G + + L K G+R
Sbjct: 430 LDYESSSSLLEAIAFTLPSIRKRQAAQE---QKMIFFLMTNLQGEALGHYLLSHMKEGKR 486
>gi|392403803|ref|YP_006440415.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Turneriella
parva DSM 21527]
gi|390611757|gb|AFM12909.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Turneriella
parva DSM 21527]
Length = 771
Score = 43.1 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYV 123
+ + ++ + E LK ++GQ+ A+ I A+K H + K + L P GTGK +
Sbjct: 444 EGAGLKSIAENLKARIYGQDAAVEKIARAIKRHRAGLGNKQKPIGSFLFTGPTGTGKTEL 503
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAI 181
T I + S ++ K + SR+ +V + QLT+ I + R++
Sbjct: 504 TRAIAGELGVELIRFDMSEYMEKHSISRLLGSPPGYVGFDQGAQLTDAIRKH----PRSV 559
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ DE++K + ++ +D+ V + + F++ + + SN+G E+
Sbjct: 560 LLLDEIEKAHPDIFSTLLQVMDYATVTDATGKKADFRHVLLVMTSNAGSGEL 611
>gi|417005785|ref|ZP_11944378.1| hypothetical protein FSLSAGS3026_08390 [Streptococcus agalactiae
FSL S3-026]
gi|341577598|gb|EGS28006.1| hypothetical protein FSLSAGS3026_08390 [Streptococcus agalactiae
FSL S3-026]
Length = 613
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
L+E+L + V GQE AI I A+ K ++ L G G GK + I +
Sbjct: 292 LKEKLMRRVKGQEEAIEAIVDAVTIAQAGLQDENKPISSFLFLGPTGVGKTELAKAIAEA 351
Query: 131 IFKRYKDKGTS-RF---VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F D+G RF +K + N + + QLT + C + + DE
Sbjct: 352 LFD---DEGAMIRFDMSEYKQKDDVAKLIGNRATKTKGQLTEGV-KQKPYC---VLLLDE 404
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTF 233
V+K ++D+ + +D + + ISF+NTI + +N G +I+N +
Sbjct: 405 VEKAHGEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW 455
>gi|358341276|dbj|GAA48992.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Clonorchis
sinensis]
Length = 489
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 14/181 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 128
++ LE +L++ + GQE AI + A++ Y L G G GK + I
Sbjct: 125 LQPLESRLRKALVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQIA 184
Query: 129 SSIFKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
+ + K K D + H+ + I P QLT ++AC A+
Sbjct: 185 AYLHKDVKKGFIRIDMSEYQQKHEVSKFIGSPPGYIGHEQGGQLTQ----ALSACPNAVV 240
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 238
+FDE +K +L ++ D + + I ++ IF+ SN G I LR+
Sbjct: 241 LFDETEKAHPDVLTALLQLFDEGRLTDGRGHTIDCKDAIFIMTSNVGSQVIAEHAQALRQ 300
Query: 239 S 239
+
Sbjct: 301 A 301
>gi|160871902|ref|ZP_02062034.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rickettsiella
grylli]
gi|159120701|gb|EDP46039.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rickettsiella
grylli]
Length = 770
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S +R LE +LK V GQ+ AI ++C A+K K + L P G GK VT
Sbjct: 450 SRLRHLETKLKARVFGQDKAIKNLCAAMKLTRSGLRETNKTIGSFLFAGPTGVGKTEVTR 509
Query: 126 FIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ + S ++ + + SR+ ++ + L + VT A+ +
Sbjct: 510 QLAELMGIELLRFDMSEYMERHSVSRLIGAPPGYIGYDQGGL---LTEAVTKHPHAVLLL 566
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
DE++K + ++++ +DH ++ + + F + I + SN+G ++
Sbjct: 567 DEIEKAHPDIFNLLLQVMDHGSLTDTNGRKTDFSHIILVMTSNAGAEQL 615
>gi|443702035|gb|ELU00197.1| hypothetical protein CAPTEDRAFT_151350 [Capitella teleta]
Length = 620
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+++ GQ+ AI+ + A++ Y L G G GK + + +
Sbjct: 267 LELRLKENIIGQDGAITTVASAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVARYL 326
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
K K D + H+ I P QLT +T A+ +FD
Sbjct: 327 HKNPKKGFIRIDMSEYQEKHEVAKFIGSPPGYVGHDEGGQLT----KKLTEQPNAVVLFD 382
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L +++ D + + I ++ IF+ SN EI + + LR+ E
Sbjct: 383 EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNLASEEIADHAISLRREAE 442
>gi|340711024|ref|XP_003394082.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
terrestris]
Length = 643
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 24/203 (11%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E +K ++ LE++L+Q++ GQ AIS + ++ L G
Sbjct: 277 EIMKEKELEERRRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 336
Query: 117 GTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRLQ 165
G GK + + + I K + D + H+ I P +++ L +L
Sbjct: 337 GIGKTELAKQLAAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYIGHDDGGQLTKL- 395
Query: 166 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFL 221
+ C A+ +FDEVDK +L V++ D + + I +N IF+
Sbjct: 396 --------LRKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMT 447
Query: 222 SNSGGTEIMNTFLELRKSGERYI 244
SN I + + LR+ +R +
Sbjct: 448 SNLASEVIADHAVHLREEAQRVM 470
>gi|15888690|ref|NP_354371.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|15156428|gb|AAK87156.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
Length = 836
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|424910221|ref|ZP_18333598.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846252|gb|EJA98774.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 835
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|418406879|ref|ZP_12980198.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens 5A]
gi|358007372|gb|EHJ99695.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens 5A]
Length = 838
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|418296177|ref|ZP_12908021.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539609|gb|EHH08847.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens CCNWGS0286]
Length = 835
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|417860181|ref|ZP_12505237.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|338823245|gb|EGP57213.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
Length = 838
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|335034989|ref|ZP_08528332.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
gi|333793420|gb|EGL64774.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
Length = 836
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|325292724|ref|YP_004278588.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
sp. H13-3]
gi|325060577|gb|ADY64268.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Agrobacterium
sp. H13-3]
Length = 838
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F R++GE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGE 644
>gi|256078931|ref|XP_002575746.1| suppressor of potassium transport defect 3 (skd3 protein)
[Schistosoma mansoni]
Length = 506
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 24/197 (12%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E K + ++ LE +L++ + GQE AI + A++ Y L G
Sbjct: 147 AEEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGS 206
Query: 116 PGTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRL 164
G GK + + + + K K D + H+ + I P +E L R
Sbjct: 207 SGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTRA 266
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLF 220
+ AC A+ +FDE +K +L ++ D + + I+ ++ IF+
Sbjct: 267 ---------LAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGTTINCKDAIFIM 317
Query: 221 LSNSGGTEIMNTFLELR 237
SN G I +LR
Sbjct: 318 TSNVGSQVIAEHAQQLR 334
>gi|193216464|ref|YP_001999706.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma arthritidis
158L3-1]
gi|193001787|gb|ACF07002.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma arthritidis
158L3-1]
Length = 714
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 61 DKFIQSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPG 117
+K ++S ++ LE L V GQE AI + A++ N + + L G G
Sbjct: 405 NKLLESQKTKLMNLENVLGTRVKGQEQAIKVVSEAIQRAKANINDPNRPIGSFLFLGPTG 464
Query: 118 TGKNYVTDFIVSSIFK---RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIIS 172
GK + + +F R S ++ K + S++ ++ + QLT +
Sbjct: 465 VGKTELARTLADCLFDDENRIIRLDMSEYMEKHSVSKLIGSPPGYIGFEKGGQLTEKVRQ 524
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
N + I +FDE++K +L++++ +D+ A+ + +++F+NTI + SN G E
Sbjct: 525 NPYS----IVLFDEIEKANSDVLNLLLQIMDNGALTDSRGKKVNFRNTIIIMTSNIGSEE 580
Query: 229 IMNTFLELRKS 239
I+N L+ +++
Sbjct: 581 ILNKTLDEQRT 591
>gi|360042934|emb|CCD78344.1| putative suppressor of potassium transport defect 3 (skd3 protein)
[Schistosoma mansoni]
Length = 506
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 24/197 (12%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E K + ++ LE +L++ + GQE AI + A++ Y L G
Sbjct: 147 AEEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGS 206
Query: 116 PGTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRL 164
G GK + + + + K K D + H+ + I P +E L R
Sbjct: 207 SGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTRA 266
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLF 220
+ AC A+ +FDE +K +L ++ D + + I+ ++ IF+
Sbjct: 267 ---------LAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGTTINCKDAIFIM 317
Query: 221 LSNSGGTEIMNTFLELR 237
SN G I +LR
Sbjct: 318 TSNVGSQVIAEHAQQLR 334
>gi|262283594|ref|ZP_06061359.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
gi|262260651|gb|EEY79352.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
Length = 809
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LEE+L + V GQ+ AIS I A++ + N + + + G G GK + + +
Sbjct: 505 LEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFVASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|157150882|ref|YP_001451248.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
gi|157075676|gb|ABV10359.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
Length = 809
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LEE+L + V GQ+ AIS I A++ + N + + + G G GK + + +
Sbjct: 505 LEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|392330339|ref|ZP_10274954.1| hypothetical protein SCAZ3_00280 [Streptococcus canis FSL Z3-227]
gi|391418018|gb|EIQ80830.1| hypothetical protein SCAZ3_00280 [Streptococcus canis FSL Z3-227]
Length = 617
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL---KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 128
L+E+L V GQE AI I A+ + Q+ N + G G GK ++ +
Sbjct: 292 LKEKLMNRVKGQEDAIDAIVDAVTIAQAGLQD--ENKPISSFMFLGPTGVGKTELSKALA 349
Query: 129 SSIFKRYKDKGTSRF-VHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
++F + RF + +F + N + + QLT + C + + D
Sbjct: 350 EALFD--DENAMIRFDMSEFKEKEDAAKLIGNRATKTKGQLTQAV-KQKPYC---VVLLD 403
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
EV+K +LD+ + +D + + ISF+NTI + +N G +I+N + EL+ S
Sbjct: 404 EVEKADGEVLDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW-ELKGS 460
>gi|257460420|ref|ZP_05625521.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
gracilis RM3268]
gi|257441751|gb|EEV16893.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
gracilis RM3268]
Length = 793
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 31 IAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHI 90
++I+A IA S S+ N + L + LE +K+ + GQ+ A+S +
Sbjct: 462 LSISANIANLSSSVDNKQVL-------------------KNLEANIKREIFGQDEAVSSL 502
Query: 91 CGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFIVSSI---FKRYKDKGTSRFVHK 146
C AL + + + + L G G GK+ + + + + F+RY D H
Sbjct: 503 CKALLRSYAGLGGASSPIGVFLFAGSSGVGKSELAKVLAAQLGVHFERY-DMSEYMEAHS 561
Query: 147 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 206
+ I P + + +N+ ++ +FDEV+K + ++ + D+ +
Sbjct: 562 VSRLIGAP----PGYVGFENGGILTNNIKKHPYSVILFDEVEKAHPSMTNIFLGIFDNAS 617
Query: 207 VYNQ----ISFQNTIFLFLSNSGGTE 228
+ + F+NTI + SN G E
Sbjct: 618 LTDNNGVTTDFKNTIIIMSSNLGTKE 643
>gi|373849359|ref|ZP_09592160.1| ATPase AAA-2 domain protein [Opitutaceae bacterium TAV5]
gi|372475524|gb|EHP35533.1| ATPase AAA-2 domain protein [Opitutaceae bacterium TAV5]
Length = 302
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 74 EQLKQHVHGQELAISHICGALKN---HFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
E L++H+ GQ+ I IC L+ N Y +L ++ G G GK +T+ +
Sbjct: 17 EHLREHIRGQDHVIDPICSVLRRGELGLANPYRPRASLLLA--GPTGVGKTELTNVFTTY 74
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQ------------LTNWIISNVTACD 178
+F + G I F +S Y+LQ T + + +
Sbjct: 75 LFPSPDNPG-----EPAAKPIRF----DMSEYQLQSSVDKLIGGAPDETGLLGRALHSLQ 125
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMN 231
R +FDE++K +LD+ + +D ++ + S +F SN G +E M
Sbjct: 126 RGTLLFDEIEKAHPLVLDLFLQILDDASITLATGERKSLSAFYVVFTSNIGASETMR 182
>gi|198422963|ref|XP_002129983.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
(Suppressor of potassium transport defect 3) [Ciona
intestinalis]
Length = 644
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 47 SKFLNGFGGGEACTDKFIQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYH 103
+KFL G +A ++ ++ + R L E +LK+++ GQ+ AI+ + A++ Y
Sbjct: 250 AKFLAG-AKVQAEQNRKLEEARERTLYPLERRLKENIVGQDGAINCVASAIRRKQNGWYD 308
Query: 104 NTKALAISLHGLPGTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFPNEN 157
L G G GK + + + + K K D + H+ I P
Sbjct: 309 EDHPLVFLFLGSSGIGKTELAKQVANYLHKDNKKGFIRLDMSEYQEKHEVAKLIGSPPGY 368
Query: 158 HVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISF 213
QLT + A A+ +FDEVDK +L V++ D + + I
Sbjct: 369 IGHEQGGQLTK----KLKAMPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGRGKTIDC 424
Query: 214 QNTIFLFLSNSGGTEIMNTFLELR 237
++ +F+ SN EI LR
Sbjct: 425 KDAVFVMTSNLAADEIAEYGARLR 448
>gi|350400658|ref|XP_003485912.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
impatiens]
Length = 643
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 24/203 (11%)
Query: 57 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
E +K ++ LE++L+Q++ GQ AIS + ++ L G
Sbjct: 277 EIMKEKELEERRRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 336
Query: 117 GTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRLQ 165
G GK + + + I K + D + H+ I P +++ L +L
Sbjct: 337 GIGKTELAKQLAAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKL- 395
Query: 166 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFL 221
+ C A+ +FDEVDK +L V++ D + + I +N IF+
Sbjct: 396 --------LRKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMT 447
Query: 222 SNSGGTEIMNTFLELRKSGERYI 244
SN I + + LR+ +R +
Sbjct: 448 SNLASEVIADHAVHLREEAQRVM 470
>gi|282601158|ref|ZP_05980957.2| negative regulator of genetic competence ClpC/MecB [Subdoligranulum
variabile DSM 15176]
gi|282570064|gb|EFB75599.1| ATPase family associated with various cellular activities (AAA)
[Subdoligranulum variabile DSM 15176]
Length = 750
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LEE LK H+ GQ+ A+ + GA+K + + + G G GK + + + +
Sbjct: 454 LEEALKAHIIGQDEAVHAVAGAIKRARADLSGRHRPASFIFVGPTGVGKTELVKQLANQL 513
Query: 132 FKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 186
F S ++ K+ SR+ +V QLT V ++ +FDE
Sbjct: 514 FDTVDPLISIDMSEYMEKYAVSRLIGSPPGYVGYDEAGQLT----EKVRRHPYSVVLFDE 569
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++K ++++++ +D + + + F NT+ SN+G T+
Sbjct: 570 IEKAHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSTD 615
>gi|383853509|ref|XP_003702265.1| PREDICTED: caseinolytic peptidase B protein homolog [Megachile
rotundata]
Length = 670
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+++ GQ+ AIS + ++ L G G GK + + + I
Sbjct: 318 LEQRLKKYIVGQDGAISIVASTIRRKENGWIDEKHPLVFLFLGSSGIGKTELAKQLAAYI 377
Query: 132 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K +G R H+ I P QLT + C A+ +F
Sbjct: 378 HKN-KPEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTK----QLRKCPNAVVLF 432
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
DEVDK +L V++ D + + I +N IF+ SN I ++LR+
Sbjct: 433 DEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFVMTSNLASEVIAEHAVQLREET 492
Query: 241 ER 242
+R
Sbjct: 493 QR 494
>gi|398378656|ref|ZP_10536812.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
AP16]
gi|397724308|gb|EJK84779.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
AP16]
Length = 841
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + A+K K + + P G GK V + SS
Sbjct: 468 LEQELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGCYIFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSAKRTGE 643
>gi|222085851|ref|YP_002544382.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
gi|221723299|gb|ACM26455.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 843
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + A+K K + + P G GK V + SS
Sbjct: 470 LEQELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGCYIFSGPTGVGKTEVAKQLASS 529
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 530 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 586
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ F +++GE
Sbjct: 587 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSAKRTGE 645
>gi|114704885|ref|ZP_01437793.1| endopeptidase Clp ATP-binding chain A [Fulvimarina pelagi HTCC2506]
gi|114539670|gb|EAU42790.1| endopeptidase Clp ATP-binding chain A [Fulvimarina pelagi HTCC2506]
Length = 832
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ QLK+ V+GQ+ AI + A+K K + L P G GK V + S+
Sbjct: 462 LDTQLKRVVYGQDQAIEALASAIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLAST 521
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 LGVEILRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 578
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + QI F+N I + +N+G +E+
Sbjct: 579 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASEM 622
>gi|52841054|ref|YP_094853.1| ATP-binding protease component ClpA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628165|gb|AAU26906.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 757
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 454 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 513
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 514 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 570
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 571 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 618
>gi|54296839|ref|YP_123208.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Paris]
gi|397663378|ref|YP_006504916.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|397666495|ref|YP_006508032.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|53750624|emb|CAH12031.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Paris]
gi|395126789|emb|CCD04972.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|395129906|emb|CCD08139.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
Length = 755
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 616
>gi|378776767|ref|YP_005185204.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507581|gb|AEW51105.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 757
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 454 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 513
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 514 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 570
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 571 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 618
>gi|148360535|ref|YP_001251742.1| ATP binding protease component ClpA [Legionella pneumophila str.
Corby]
gi|296106399|ref|YP_003618099.1| ATP binding protease component [Legionella pneumophila 2300/99
Alcoy]
gi|148282308|gb|ABQ56396.1| ATP binding protease component ClpA [Legionella pneumophila str.
Corby]
gi|295648300|gb|ADG24147.1| ATP binding protease component [Legionella pneumophila 2300/99
Alcoy]
gi|307609612|emb|CBW99114.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila 130b]
Length = 755
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 616
>gi|297570431|ref|YP_003691775.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurivibrio alkaliphilus AHT2]
gi|296926346|gb|ADH87156.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurivibrio alkaliphilus AHT2]
Length = 764
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFI 127
+R+LE LK + GQ+ AIS + GA+K + A G G GK + +
Sbjct: 466 LRLLETMLKSQIFGQDQAISALTGAVKRSRAGIKRPEGPTGAFLFAGPTGVGKTELARQL 525
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+++ ++ S ++ K SR+ +V + L + + ++ +FDE
Sbjct: 526 AANLSIHFERFDMSEYMEKHAVSRLIGSPPGYVGFDQGGL---LTEAIRKHPHSVLLFDE 582
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K + +++ +DH ++ + + F+N I + +N+G E+
Sbjct: 583 LEKAHPDIFSILLQVMDHASLTDNSGRKADFRNVILIMTTNAGAREL 629
>gi|421766452|ref|ZP_16203226.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
garvieae DCC43]
gi|407625220|gb|EKF51935.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
garvieae DCC43]
Length = 816
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
+S + LE++L + V GQE AIS + A++ + + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADSRRPLGSFMFLGPTGVGKTEL 563
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 178
+ S+F + S ++ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEESMIRVDMSEYMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ +FDEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILFDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|384490395|gb|EIE81617.1| hypothetical protein RO3G_06322 [Rhizopus delemar RA 99-880]
Length = 951
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 130
LE+ LK + GQ I + A++ QN +H+ + L G G GK + + +
Sbjct: 259 LEDALKSRIVGQLGPIYALASAIRRK-QNGWHDEEHPLVFLFCGSSGVGKTELAKALAQN 317
Query: 131 IFKRYKDKG-----TSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFI 183
+ + DKG S F HK + SR +V QLT + C A+ +
Sbjct: 318 LHGKQMDKGFIRIDMSEFQHKHDVSRFIGSPPGYVGYDEGGQLTE----KLKECPNAVVL 373
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 237
DEV+K +L +++ D + + + ++ IF+ SN EI + LR
Sbjct: 374 LDEVEKAHPDVLTIMLQLFDEGRITDGKGTTVECKDAIFIMTSNLAQHEIADEAELLR 431
>gi|406998439|gb|EKE16371.1| ATPase AAA-2 protein [uncultured bacterium]
Length = 833
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE+ L Q + GQE A++ I AL+ ++ K + L G G GK +
Sbjct: 547 LEKNLHQQIIGQEEAVNQIAEALRRTRSGISNSKKPVGSFLFLGPTGVGKTETAKALAKI 606
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
F G + +F+ S P+ + + +L + + V ++ + DE+
Sbjct: 607 YF------GDEEKMIRFDMSEFQTPSSIDRLIGSSQLNQPGRLATQVKDNPYSLILLDEI 660
Query: 188 DKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
+K +LD+ + +D V + +I+F+NTI + SN+G I N
Sbjct: 661 EKAYPEILDIFLQILDEGYVTDAFGEKINFRNTIIIATSNAGAALIKN 708
>gi|429763453|ref|ZP_19295802.1| putative negative regulator of genetic competence ClpC/MecB
[Anaerostipes hadrus DSM 3319]
gi|429178647|gb|EKY19923.1| putative negative regulator of genetic competence ClpC/MecB
[Anaerostipes hadrus DSM 3319]
Length = 819
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
+R LE++L +HV GQ+ A++ + A+K + + N + G G GK ++ +
Sbjct: 507 LRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSKTL 566
Query: 128 VSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 182
++F R +D S ++ K + S+I +V QL+ I + ++
Sbjct: 567 AKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRH----PYSVL 622
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
+FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 623 LFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 674
>gi|167766277|ref|ZP_02438330.1| hypothetical protein CLOSS21_00781 [Clostridium sp. SS2/1]
gi|167711996|gb|EDS22575.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. SS2/1]
gi|291559090|emb|CBL37890.1| ATPases with chaperone activity, ATP-binding subunit
[butyrate-producing bacterium SSC/2]
Length = 819
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
+R LE++L +HV GQ+ A++ + A+K + + N + G G GK ++ +
Sbjct: 507 LRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSKTL 566
Query: 128 VSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 182
++F R +D S ++ K + S+I +V QL+ I + ++
Sbjct: 567 AKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRH----PYSVL 622
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
+FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 623 LFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 674
>gi|90419586|ref|ZP_01227496.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Aurantimonas
manganoxydans SI85-9A1]
gi|90336523|gb|EAS50264.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Aurantimonas
manganoxydans SI85-9A1]
Length = 820
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 62 KFIQSSNVRVLEE---QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 117
K + + VLE QLK+ V+GQ+ AI + A+K K + L P G
Sbjct: 450 KAVSKDDAEVLEHLDAQLKRVVYGQDAAIGSLASAIKLARAGLREPDKPIGSYLFSGPTG 509
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 176
GK V + +++ S ++ + SR+ +V + L + V
Sbjct: 510 VGKTEVARQLAAALGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 566
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ + DEV+K L ++++ +DH + + QI F+N I + +N+G +E+
Sbjct: 567 HPHCVLLLDEVEKAHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASEM 623
>gi|239635874|ref|ZP_04676897.1| ATPase AAA-2 domain protein [Staphylococcus warneri L37603]
gi|239598498|gb|EEQ80972.1| ATPase AAA-2 domain protein [Staphylococcus warneri L37603]
Length = 882
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 53 FGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAIS 111
F G E +D I+ + +R L+ +K + GQ+ AI+ I A ++ + HN
Sbjct: 561 FQGDEQFSD--IELNRLRSLKAVMKSQIIGQDDAINTIANAVIRKKLGFKQHNHPVGVFM 618
Query: 112 LHGLPGTGKNYVTDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQL 166
L G G GK + +++K D + H+ S++ P +V R
Sbjct: 619 LLGTTGVGKTETAKILNRTLYKDESNIIRFDMSEYQKDHEV-SKLIGPPPGYVGYGR--- 674
Query: 167 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLS 222
++ V A+ +FDEV+K + D+++ D + N + +F I L S
Sbjct: 675 DGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDDARLTNSLGEVANFSECIILLTS 734
Query: 223 NSGGTEI 229
N G ++I
Sbjct: 735 NIGTSDI 741
>gi|435856135|ref|YP_007316987.1| clp protease ATP binding subunit (chloroplast) [Nannochloropsis
gaditana]
gi|429126059|gb|AFZ64230.1| clp protease ATP binding subunit (chloroplast) [Nannochloropsis
gaditana]
Length = 449
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE+ L H+ GQE A++ + +L+ + + + + + L G G GK +T + +
Sbjct: 113 LEQDLGNHIIGQERALAVVAKSLRRYAAGLRNPKRPIGSFLLCGPTGVGKTELTKQLAEN 172
Query: 131 IFKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
+F K S ++ K +R+ +V QLT+ + S C I +FD
Sbjct: 173 LFGSQKALIRLDMSEYMEKHTVARLIGSPPGYVGFEEGGQLTDAVRSR-PYC---IVLFD 228
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 230
E++K + +V++ +D + + +SFQNT+ + SN G I+
Sbjct: 229 EIEKAHPDVYNVLLQILDDGILSDSTGRTVSFQNTLIMLTSNLGSQTIL 277
>gi|313230285|emb|CBY07989.1| unnamed protein product [Oikopleura dioica]
Length = 537
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 14/185 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +L +++ GQ+ AI + A++ + + + G G GK + + I
Sbjct: 208 LESRLSENIIGQKAAIKQVAAAIRRKENGWVDSDHPVVMIFLGSSGIGKTELAKQVAKYI 267
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
K D H+ I P QLT +T C A+ +FD
Sbjct: 268 HGNMKEGFVRIDMSEYSSQHEVARLIGAPPGYVGHDKGGQLTE----ALTKCPNAVVLFD 323
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
E++K L +++ D + + I ++ IF+ SN +I + + LR GE
Sbjct: 324 EIEKAHPDALPILLQLFDEGRMTDGQGKTIECKDAIFIMTSNLASGQIADYGVALRSKGE 383
Query: 242 RYITI 246
T+
Sbjct: 384 EKTTV 388
>gi|269958722|ref|YP_003328509.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma centrale
str. Israel]
gi|269848551|gb|ACZ49195.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma centrale
str. Israel]
Length = 781
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 59 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 116
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 462 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 521
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GK + + ++ + S ++ H I P +V + L + +
Sbjct: 522 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGL---LTDTI 577
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 578 ARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 635
>gi|407777623|ref|ZP_11124891.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor pacificus pht-3B]
gi|407300423|gb|EKF19547.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor pacificus pht-3B]
Length = 821
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++LK+ V+GQE AI+ + A+K K + L P G GK V + +S
Sbjct: 466 LEQELKRVVYGQETAITALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + I F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGAADL 626
>gi|304439880|ref|ZP_07399774.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371619|gb|EFM25231.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 819
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 123
+++ +R L+ L++ V GQ+ AI + A+K + N + G G GK Y+
Sbjct: 493 ENTKLRELDNNLRRSVKGQDEAIISLSKAIKRARVGLKDKNRPIGSFIFVGPTGVGKTYL 552
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 178
+ + +F + S ++ K + SR+ +V QLT + SN
Sbjct: 553 SKKLAEEVFGNESNMIRIDMSEYMEKHSVSRLVGSPPGYVGHEEGGQLTEIVRSN----P 608
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
++ +FDE++K + ++++ +D + + +SF++TI + SN+G T + N
Sbjct: 609 YSVILFDEIEKAHPDVFNILLQILDDGILTDSQGRTVSFKDTIIIMTSNAGATLLKN 665
>gi|56416863|ref|YP_153937.1| ATP-dependent Clp protease ATP-binding subunit [Anaplasma marginale
str. St. Maries]
gi|222475228|ref|YP_002563644.1| ATP-dependent clp protease ATP-binding subunit ClpA [Anaplasma
marginale str. Florida]
gi|56388095|gb|AAV86682.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma marginale
str. St. Maries]
gi|222419365|gb|ACM49388.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Florida]
Length = 781
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 59 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 116
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 462 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 521
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
G GK + + ++ + S ++ H I P +V + L + +
Sbjct: 522 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGL---LTDTI 577
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 578 ARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 635
>gi|417938004|ref|ZP_12581303.1| ATPase, AAA family [Streptococcus infantis SK970]
gi|343391645|gb|EGV04219.1| ATPase, AAA family [Streptococcus infantis SK970]
Length = 485
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 247 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 306
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 307 LFDDESALIRF---DMSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 360
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 361 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 412
>gi|385261014|ref|ZP_10039147.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
gi|385189600|gb|EIF37062.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
Length = 810
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|309799549|ref|ZP_07693778.1| ClpC [Streptococcus infantis SK1302]
gi|308116825|gb|EFO54272.1| ClpC [Streptococcus infantis SK1302]
Length = 810
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418196866|ref|ZP_12833336.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
gi|353858026|gb|EHE37987.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
Length = 327
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 64 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 123
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 124 LFDDESALIRF---DMSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 177
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 178 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 229
>gi|218675720|gb|AAI69269.2| hypothetical protein LOC54863 [synthetic construct]
Length = 113
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 20 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 78
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPN 155
++V + +D S V ++++R H P
Sbjct: 79 SHVGRLLARHFRSVLED---SALVLQYHARHHCPE 110
>gi|404319054|ref|ZP_10966987.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
anthropi CTS-325]
Length = 824
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|239832058|ref|ZP_04680387.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ochrobactrum
intermedium LMG 3301]
gi|444310396|ref|ZP_21146018.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
intermedium M86]
gi|239824325|gb|EEQ95893.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ochrobactrum
intermedium LMG 3301]
gi|443486204|gb|ELT48984.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
intermedium M86]
Length = 824
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|153009351|ref|YP_001370566.1| ATP-dependent Clp protease ATP-binding protein ClpA [Ochrobactrum
anthropi ATCC 49188]
gi|151561239|gb|ABS14737.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ochrobactrum
anthropi ATCC 49188]
Length = 824
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F R+ G+
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMAKAAIGFGSTRREGD 639
>gi|395791063|ref|ZP_10470521.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
alsatica IBS 382]
gi|395408426|gb|EJF75036.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
alsatica IBS 382]
Length = 787
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++LK ++GQ+ AI+ + ++K + K + L P G GK V + SS
Sbjct: 457 LEKELKHVIYGQDQAITSLVSSIKLARAGLRESEKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 I--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ Y ++ T +R + I F LT+ + N AI
Sbjct: 517 LGVELLRFDMSEYMERHTVARLIGAPPGYIGFDQGG-------LLTDAVDQN----PHAI 565
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FL 234
+ DE++K L ++++ +D+ + + +I F+N I + +N+G +++ + F
Sbjct: 566 LLLDEIEKAHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSVIGFS 625
Query: 235 ELRKSGE 241
++R+ G+
Sbjct: 626 KVRREGD 632
>gi|255003210|ref|ZP_05278174.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Puerto Rico]
gi|255004338|ref|ZP_05279139.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Virginia]
Length = 768
Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 59 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 116
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 449 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 508
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQ-LTNWIISN 173
G GK + + ++ + S ++ H I P +V + LT+ I N
Sbjct: 509 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGLLTDTIARN 567
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 568 ----QYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 622
>gi|254995051|ref|ZP_05277241.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Mississippi]
Length = 767
Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 59 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 116
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 448 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 507
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQ-LTNWIISN 173
G GK + + ++ + S ++ H I P +V + LT+ I N
Sbjct: 508 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGLLTDTIARN 566
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 567 ----QYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 621
>gi|440226535|ref|YP_007333626.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhizobium
tropici CIAT 899]
gi|440038046|gb|AGB71080.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhizobium
tropici CIAT 899]
Length = 844
Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + ++K K + + P G GK V + SS
Sbjct: 468 LEQELRSVVYGQDTAIEALSTSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH A+ + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|381179965|ref|ZP_09888810.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Treponema
saccharophilum DSM 2985]
gi|380768061|gb|EIC02055.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Treponema
saccharophilum DSM 2985]
Length = 764
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+ +R LE L+ + GQ+ A+S IC A+K TK A L G G GK +
Sbjct: 458 EKERLRDLEGALRSRIFGQDEAVSRICVAVKKARAGFRDETKPEASFLFVGPTGVGKTEL 517
Query: 124 TDFIVSSI--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 174
+ ++ Y++ T SR + + + N + + V
Sbjct: 518 AKSLGDTLGLPLVRFDMSEYQESYTVSRLIGSAPGYVGYDN-----------GGLLTAAV 566
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+I +FDE++K + + ++++ +D+ + + + F+N I +F SN+G ++
Sbjct: 567 KKSPHSIVLFDEIEKAHQDIYNILLQVLDYGTLTDNQGQKADFRNCIIIFTSNAGARDM 625
>gi|118357902|ref|XP_001012199.1| ATP-dependent protease La [Tetrahymena thermophila]
gi|89293966|gb|EAR91954.1| ATP-dependent protease La [Tetrahymena thermophila SB210]
Length = 1117
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 42/186 (22%)
Query: 76 LKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 134
L ++G E I + N +N + +K + L G PGTGK +
Sbjct: 509 LDDEIYGLEKVKERIIEMIAVNQMKNTHSKSKGFILLLQGPPGTGKTSIA---------- 558
Query: 135 YKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV---------TACDRAIFIFD 185
K ++ + K N I F + S ++ ++ S +FI D
Sbjct: 559 ---KAVAKALQKENRFISFAGISDPSFFKGHRRTYVDSQPGVFIKELIKAQTMNPVFILD 615
Query: 186 EVDKFPK---------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 231
E+DK K L++++ P F DH+ ++ F NTIF+ +N+ IMN
Sbjct: 616 EIDKISKSSMGADPYYSLMEILNPEENNNFTDHYMDI-KVDFSNTIFILTANN----IMN 670
Query: 232 TFLELR 237
L+
Sbjct: 671 MLEPLK 676
>gi|359406565|ref|ZP_09199243.1| putative ATP-dependent Clp protease ATP-binding subunit ClpA
[Prevotella stercorea DSM 18206]
gi|357555498|gb|EHJ37144.1| putative ATP-dependent Clp protease ATP-binding subunit ClpA
[Prevotella stercorea DSM 18206]
Length = 737
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
+R LE +K+ + GQ+ A++ + A++ +TK +A L G G GK V +
Sbjct: 442 LRTLESDIKKEIFGQDEAVARVVEAVQMSKAGLADDTKPMASLLFVGPTGVGKTEVARVL 501
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S + K +++ +V L + C + +FDE
Sbjct: 502 SERMGMKLVRFDMSEYAEKHAVAKLIGSPAGYVGYEDGGLLTAAVRKTPNC---VLLFDE 558
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 226
++K + ++ + +D+ A+ + + F+N + + SN+G
Sbjct: 559 IEKAHPDIFNIFLQMMDYAALTDNHGERADFRNAVIIMTSNAGA 602
>gi|420143743|ref|ZP_14651240.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856614|gb|EIT67154.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 816
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
+S + LE++L + V GQE AIS + A++ + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGSFMFLGPTGVGKTEL 563
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 178
+ S+F ++ S F+ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEENMIRVDMSEFMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ + DEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|347520959|ref|YP_004778530.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385832322|ref|YP_005870097.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343179527|dbj|BAK57866.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343181475|dbj|BAK59813.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 816
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
+S + LE++L + V GQE AIS + A++ + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGSFMFLGPTGVGKTEL 563
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 178
+ S+F ++ S F+ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEENMIRVDMSEFMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ + DEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|335042360|ref|ZP_08535387.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
gi|333788974|gb|EGL54856.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
Length = 754
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT-- 124
N+R LE+ LK+ + GQ+ AIS + A+K H K L P G GK VT
Sbjct: 447 NLRKLEDNLKRVIFGQDEAISALGSAIKMARSGLGHPEKPTGAFLFAGPTGVGKTEVTRQ 506
Query: 125 -------DFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC 177
D I + + + SR + + F LT+ II
Sbjct: 507 LAHNLGVDLIRFDMSEYMESHTVSRLIGAPPGYVGFDQGG-------LLTDAIIKQ---- 555
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
A+ + DE++K + ++++ +DH + + + F++ + + SN+G E+
Sbjct: 556 PHAVLLLDEIEKAHPDVFNLLLQVMDHGTLTDNNGRKADFRHVVLVMTSNAGAAEM 611
>gi|419443598|ref|ZP_13983618.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
gi|379549149|gb|EHZ14260.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
Length = 810
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEA 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|317496968|ref|ZP_07955298.1| ATPase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895980|gb|EFV18132.1| ATPase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 696
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTD 125
+R LE++L +HV GQ+ A++ + A+K + + L G G GK ++
Sbjct: 382 ERLRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSK 441
Query: 126 FIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRA 180
+ ++F R +D S ++ K + S+I +V QL+ I + +
Sbjct: 442 TLAKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRHPY----S 497
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
+ +FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 498 VLLFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 551
>gi|148998004|ref|ZP_01825517.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147756014|gb|EDK63057.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
Length = 726
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFKRYKDKGT------SRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F D+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LF---DDESALIRFDMSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 671
>gi|308163329|gb|EFO65679.1| ClpB protein [Giardia lamblia P15]
Length = 882
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE+ + V GQE A+ +C ++ T+ L L G G GK Y+ I
Sbjct: 576 LEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFLGSSGVGKTYLAKTIAEE 635
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFP----NENHVSLYRL----------QLTNWIISNVTA 176
++ +S IH E H S+ RL + + V+
Sbjct: 636 LYD------------SVDSMIHIDMSEYTEQH-SVSRLIGAPPGYVGYEQAGQLTEAVSR 682
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMNT 232
A+ +FDE++K +L +++ +D + N + F NT+ + SN G E++
Sbjct: 683 KRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRELLQC 742
Query: 233 F 233
+
Sbjct: 743 Y 743
>gi|159117563|ref|XP_001709001.1| ClpB protein [Giardia lamblia ATCC 50803]
gi|157437116|gb|EDO81327.1| ClpB protein [Giardia lamblia ATCC 50803]
Length = 882
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LE+ + V GQE A+ +C ++ T+ L L G G GK Y+ I
Sbjct: 576 LEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFLGSSGVGKTYLAKTIAEE 635
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFP----NENHVSLYRL----------QLTNWIISNVTA 176
++ +S IH E H S+ RL + + V+
Sbjct: 636 LYD------------SVDSMIHIDMSEYTEQH-SVSRLIGAPPGYVGYEQAGQLTEAVSR 682
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMNT 232
A+ +FDE++K +L +++ +D + N + F NT+ + SN G E++
Sbjct: 683 KRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRELLQC 742
Query: 233 F 233
+
Sbjct: 743 Y 743
>gi|407973259|ref|ZP_11154171.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor indicus C115]
gi|407431100|gb|EKF43772.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor indicus C115]
Length = 824
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQE AI + A+K K + L P G GK V + +S
Sbjct: 467 LETELKRVVYGQEAAIDALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH + + +I F+N I + +N+G +++ F R+ G+
Sbjct: 584 AHPDLFNILLQVMDHGQLTDHNGKKIDFRNVILIMTTNAGASDLAKPAIGFATSRREGD 642
>gi|415750498|ref|ZP_11478340.1| clpC [Streptococcus pneumoniae SV35]
gi|415753392|ref|ZP_11480374.1| clpC [Streptococcus pneumoniae SV36]
gi|381309039|gb|EIC49882.1| clpC [Streptococcus pneumoniae SV36]
gi|381316348|gb|EIC57098.1| clpC [Streptococcus pneumoniae SV35]
Length = 810
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ + +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGASPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|334316032|ref|YP_004548651.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti AK83]
gi|407720428|ref|YP_006840090.1| ClpA protein [Sinorhizobium meliloti Rm41]
gi|418404196|ref|ZP_12977664.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Sinorhizobium
meliloti CCNWSX0020]
gi|334095026|gb|AEG53037.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
meliloti AK83]
gi|359501851|gb|EHK74445.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Sinorhizobium
meliloti CCNWSX0020]
gi|407318660|emb|CCM67264.1| ClpA homolog protein [Sinorhizobium meliloti Rm41]
Length = 838
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F +++GE
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMARAAIGFGSSKRTGE 641
>gi|150396336|ref|YP_001326803.1| ATP-dependent Clp protease ATP-binding protein ClpA [Sinorhizobium
medicae WSM419]
gi|150027851|gb|ABR59968.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
medicae WSM419]
Length = 838
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F +++GE
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMARAAIGFGSSKRTGE 641
>gi|15965240|ref|NP_385593.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti 1021]
gi|384529200|ref|YP_005713288.1| ATP-dependent Clp protease ATP-binding protein ClpA [Sinorhizobium
meliloti BL225C]
gi|384536518|ref|YP_005720603.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti SM11]
gi|433613258|ref|YP_007190056.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti GR4]
gi|15074420|emb|CAC46066.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811376|gb|AEG04045.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
meliloti BL225C]
gi|336033410|gb|AEH79342.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti SM11]
gi|429551448|gb|AGA06457.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti GR4]
Length = 838
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F +++GE
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMARAAIGFGSSKRTGE 641
>gi|306826128|ref|ZP_07459463.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304431604|gb|EFM34585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 810
Score = 41.6 bits (96), Expect = 0.32, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
IF R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 IFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421299648|ref|ZP_15750329.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
gi|395898028|gb|EJH08977.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
Length = 685
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 381 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 440
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 441 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 494
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 495 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 546
>gi|357236003|ref|ZP_09123346.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
gi|356883985|gb|EHI74185.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
Length = 813
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 61 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPG 117
+K Q+ N R L E +L + V GQE A+S + A++ N R + G G
Sbjct: 496 EKMTQADNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNRSGIRTGKRPIGSFMFLGPTG 555
Query: 118 TGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 170
GK + + +F R+ S ++ KF SR++ +V + +
Sbjct: 556 VGKTELAKALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGEL 609
Query: 171 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 226
V ++ +FDEV+K + +V++ +D + + Q++F NTI + SN G
Sbjct: 610 TEKVRQKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRQVNFSNTIIIMTSNLGA 669
Query: 227 TEI 229
T +
Sbjct: 670 TAL 672
>gi|148261529|ref|YP_001235656.1| ATP-dependent Clp protease ATP-binding protein ClpA [Acidiphilium
cryptum JF-5]
gi|326405017|ref|YP_004285099.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidiphilium
multivorum AIU301]
gi|338983940|ref|ZP_08633078.1| ClpA protein [Acidiphilium sp. PM]
gi|146403210|gb|ABQ31737.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Acidiphilium
cryptum JF-5]
gi|325051879|dbj|BAJ82217.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidiphilium
multivorum AIU301]
gi|338207140|gb|EGO95139.1| ClpA protein [Acidiphilium sp. PM]
Length = 775
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRTLERDLKSMVFGQDSAIEALSAAIKLARAGLRDAEKPIGCYLFSGPTGVGKTEVARQL 514
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + +V + + DE
Sbjct: 515 ASTLGIELTRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDSVDQHPHCVLLLDE 571
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
++K L ++++ +DH + + + F+N I + +N+G ++ T
Sbjct: 572 IEKAHPDLFNILLQVMDHGKLTDHNGKTVDFRNVILIMTTNAGAADMAKT 621
>gi|185178951|ref|ZP_02964709.1| chaperone ClpB [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|184209225|gb|EDU06268.1| chaperone ClpB [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
Length = 347
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 230
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 169 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 228
Query: 231 NTFLELRKS 239
N +EL+K+
Sbjct: 229 NALMELQKT 237
>gi|54293795|ref|YP_126210.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Lens]
gi|53753627|emb|CAH15085.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Lens]
Length = 755
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +E++
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASELV 616
>gi|225551112|ref|ZP_03772058.1| chaperone ClpB [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|225378927|gb|EEH01292.1| chaperone ClpB [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
Length = 704
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 230
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 526 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 585
Query: 231 NTFLELRKS 239
N +EL+K+
Sbjct: 586 NALMELQKT 594
>gi|171920854|ref|ZP_02932019.1| chaperone ClpB [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|188024102|ref|ZP_02996842.1| chaperone ClpB [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518236|ref|ZP_03003770.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|188524403|ref|ZP_03004425.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867858|ref|ZP_03079857.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273810|ref|ZP_03206344.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554597|ref|YP_002284827.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225550792|ref|ZP_03771741.1| chaperone ClpB [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|171903058|gb|EDT49347.1| chaperone ClpB [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|188019151|gb|EDU57191.1| chaperone ClpB [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188998013|gb|EDU67110.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|195659991|gb|EDX53371.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660435|gb|EDX53693.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249565|gb|EDY74347.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209542098|gb|ACI60327.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225379946|gb|EEH02308.1| chaperone ClpB [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 704
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 230
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 526 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 585
Query: 231 NTFLELRKS 239
N +EL+K+
Sbjct: 586 NALMELQKT 594
>gi|430003976|emb|CCF19767.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium sp.]
Length = 839
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + ++K R N A G G GK V + SS
Sbjct: 466 LEKELRSVVYGQDKAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + +V ++ + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDSVDQHPHSVVLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ F +++GE
Sbjct: 583 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 641
>gi|73667083|ref|YP_303099.1| ATP-dependent Clp protease [Ehrlichia canis str. Jake]
gi|72394224|gb|AAZ68501.1| ATP-dependent clp protease [Ehrlichia canis str. Jake]
Length = 759
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
VR LE LKQ + GQ+ AISH+ ++K ++ K LA L P G GK + +
Sbjct: 455 VRNLESNLKQSIFGQDFAISHLVDSIKIAKAGLRNHNKPLASYLFAGPTGVGKTELAKQL 514
Query: 128 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ + S ++ H + I P +V + L + +++ ++ + D
Sbjct: 515 AEHMGMKLIRFDMSEYMEPHAISKIIGSP-PGYVGYDQGGL---LTDSISRHQYSVLLLD 570
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
E++K + ++++ +D+ V + +++F N + + +N+G E+
Sbjct: 571 EIEKAHNDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFEL 618
>gi|424894877|ref|ZP_18318451.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393179104|gb|EJC79143.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|424890537|ref|ZP_18314136.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393172755|gb|EJC72800.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|424870444|ref|ZP_18294106.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393166145|gb|EJC66192.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|424914143|ref|ZP_18337507.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392850319|gb|EJB02840.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|417108858|ref|ZP_11962961.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CNPAF512]
gi|327189212|gb|EGE56391.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CNPAF512]
Length = 814
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 452 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 511
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 512 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 568
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 569 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 627
>gi|190891597|ref|YP_001978139.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium etli
CIAT 652]
gi|190696876|gb|ACE90961.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
Length = 829
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 642
>gi|209549171|ref|YP_002281088.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534927|gb|ACI54862.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|241204497|ref|YP_002975593.1| ATP-dependent Clp protease ATP-binding protein ClpA [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858387|gb|ACS56054.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|116251969|ref|YP_767807.1| ATP-dependent Clp protease ATP-binding subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256617|emb|CAK07705.1| putative ATP-dependent Clp protease ATP-binding subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 830
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|374260383|ref|ZP_09618982.1| ATP binding protease component ClpA [Legionella drancourtii LLAP12]
gi|363539324|gb|EHL32719.1| ATP binding protease component ClpA [Legionella drancourtii LLAP12]
Length = 755
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALSSAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G +E++
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASELV 616
>gi|344172166|emb|CCA84794.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
syzygii R24]
Length = 762
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQE AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQEPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E+MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-EMMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|57239194|ref|YP_180330.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Welgevonden]
gi|58579152|ref|YP_197364.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ehrlichia
ruminantium str. Welgevonden]
gi|57161273|emb|CAH58194.1| ATP-dependent Clp protease, ATP-binding subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417778|emb|CAI26982.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Welgevonden]
Length = 764
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
V+ LE+ LKQH+ GQ+ AIS + ++K + K LA L P G GK + +
Sbjct: 460 VKNLEKNLKQHIFGQDFAISSLVDSIKIAKAGLRDHRKPLASYLFTGPTGVGKTELAKQL 519
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + + S ++ + S+I +V + L + +++ ++ + DE
Sbjct: 520 ANHMGMKLIRFDMSEYMESHSISKIIGSPPGYVGYDQGGL---LTDSISRHQYSVLLLDE 576
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K + ++++ +D+ V + ++SF N I + +N+G E+
Sbjct: 577 IEKAHSDIYNILLQIMDYGCVTDTYGRKVSFHNVIVILTTNAGAFEL 623
>gi|58617205|ref|YP_196404.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ehrlichia
ruminantium str. Gardel]
gi|58416817|emb|CAI27930.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Gardel]
Length = 764
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
V+ LE+ LKQH+ GQ+ AIS + ++K + K LA L P G GK + +
Sbjct: 460 VKNLEKNLKQHIFGQDFAISSLVDSIKIAKAGLRDHRKPLASYLFTGPTGVGKTELAKQL 519
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + + S ++ + S+I +V + L + +++ ++ + DE
Sbjct: 520 ANHMGMKLIRFDMSEYMESHSISKIIGSPPGYVGYDQGGL---LTDSISRHQYSVLLLDE 576
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K + ++++ +D+ V + ++SF N I + +N+G E+
Sbjct: 577 IEKAHSDIYNILLQIMDYGCVTDTYGRKVSFHNVIVILTTNAGAFEL 623
>gi|328543446|ref|YP_004303555.1| endopeptidase Clp ATP-binding chain A [Polymorphum gilvum
SL003B-26A1]
gi|326413190|gb|ADZ70253.1| Endopeptidase Clp ATP-binding chain A [Polymorphum gilvum
SL003B-26A1]
Length = 813
Score = 41.2 bits (95), Expect = 0.41, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L ++LK+ V+GQ+ AI + A+K K + L P G GK V + SS
Sbjct: 462 LGDELKRVVYGQDKAIDTLASAIKLARAGLREPDKPIGSYLFSGPTGVGKTEVARQLASS 521
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 578
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH + + Q+ F+N I + +N+G ++ F ++R+ G+
Sbjct: 579 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADMARAPIGFSQVRREGD 637
>gi|313885400|ref|ZP_07819150.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619130|gb|EFR30569.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
Length = 819
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 28/185 (15%)
Query: 62 KFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGK 120
K +S + LEE+L + V GQE A+S + A++ + + + + L G G GK
Sbjct: 503 KMTESKRLVHLEEELHERVIGQEEAVSSVSRAIRRAYSGLKNPNRPIGSFLFLGPTGVGK 562
Query: 121 NYVTDFIVSSIF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTN 168
+ + S++F Y +K T SR V + + QLT
Sbjct: 563 TELAKALASAMFGSQDNMIRVDMSEYMEKHTVSRLVGAPPGYVGYDEAG-------QLT- 614
Query: 169 WIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNS 224
V ++ + DEV+K + ++++ D + + ++ F+NTI + SN
Sbjct: 615 ---EQVRQKPYSVILLDEVEKAHPDVFNILLQVFDDGHLTDGKGRKVDFRNTIIIMTSNM 671
Query: 225 GGTEI 229
G T +
Sbjct: 672 GATAL 676
>gi|298291486|ref|YP_003693425.1| ATP-dependent Clp protease ATP-binding subunit clpA [Starkeya
novella DSM 506]
gi|296927997|gb|ADH88806.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Starkeya
novella DSM 506]
Length = 812
Score = 41.2 bits (95), Expect = 0.44, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK+ V+GQ+ AI + A+K K + L P G GK V + SS
Sbjct: 460 LETTLKRVVYGQDKAIEALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLASS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTISRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
L ++++ +DH + + Q+ F+N I + +N+G ++ + +S
Sbjct: 577 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADLTKSAFGFTRS 630
>gi|19552991|ref|NP_600993.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62390668|ref|YP_226070.1| Clp family ATP-binding protease [Corynebacterium glutamicum ATCC
13032]
gi|21324559|dbj|BAB99183.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326006|emb|CAF20169.1| PUTATIVE CLP-FAMILY ATP-BINDING PROTEASE [Corynebacterium
glutamicum ATCC 13032]
gi|385143897|emb|CCH24936.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 595
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFIVSS 130
++++L + V Q LA + + L+ + + ++ L+ L G G GK + +
Sbjct: 286 IKDKLDEKVMAQSLATTVVARRLQLVVADLHDKSRPLSNFLFTGPTGVGKTELVKQLARV 345
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 190
+F T R + +F+ F E+ + L+R +LT + AI + DEV+K
Sbjct: 346 LFG----DDTGRLI-RFDMS-EFALESSLDLFRSELTRRVADQ----GNAIVLLDEVEKA 395
Query: 191 PKGLLDVIIPFIDHHAV---YN-QISFQNTIFLFLSNSGGTEIMNTF 233
+ + +++ +D + YN ++SF NT ++ ++ + G+EI T
Sbjct: 396 DRAIARLLLQVLDDGRLSDDYNREVSFLNT-YIVMTTNAGSEIFETI 441
>gi|418619819|ref|ZP_13182631.1| ATPase, AAA family [Staphylococcus hominis VCU122]
gi|374823817|gb|EHR87809.1| ATPase, AAA family [Staphylococcus hominis VCU122]
Length = 881
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 73/185 (39%), Gaps = 28/185 (15%)
Query: 64 IQSSNVRVLEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNY 122
I+ + L++ +K + GQ+ AI I A ++ + N L G G GK
Sbjct: 568 IEIDRLSQLKDTMKSQIIGQDEAIETIANAVIRKKLGFKQSNRPVGVFMLLGTTGVGKTE 627
Query: 123 VTDFIVSSIFK------RY------KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI 170
+ ++++ RY K+ S+ + I F + +
Sbjct: 628 TAKILNKTLYRDEQNIIRYDMSEYQKEHEVSKLIGPPPGYIGFGQDGD-----------L 676
Query: 171 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGG 226
+ V RA+ +FDE++K + DV++ D + N + F +I L SN G
Sbjct: 677 VKTVLEHPRAVILFDEIEKAHPKIFDVLLQVFDDGRLTNSLGETADFSESIILLTSNIGA 736
Query: 227 TEIMN 231
++I N
Sbjct: 737 SDIQN 741
>gi|395778291|ref|ZP_10458803.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
elizabethae Re6043vi]
gi|423715452|ref|ZP_17689676.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
elizabethae F9251]
gi|395417499|gb|EJF83836.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
elizabethae Re6043vi]
gi|395429579|gb|EJF95640.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
elizabethae F9251]
Length = 783
Score = 40.8 bits (94), Expect = 0.46, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++R+ GE
Sbjct: 574 AHPELFNILLQVMDYGRLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKVRRDGE 632
>gi|313683053|ref|YP_004060791.1| ATP-dependent clp protease, ATP-binding subunit clpa [Sulfuricurvum
kujiense DSM 16994]
gi|313155913|gb|ADR34591.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sulfuricurvum
kujiense DSM 16994]
Length = 726
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK V GQ+ A++ + A+K + K +A L P G GK + + S
Sbjct: 436 LETDLKTLVIGQDQAVAQVVKAIKRSYAGLSAAQKPIASFLFSGPTGVGKTELAKSLASE 495
Query: 131 I---FKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ F+R+ S ++ K SR+ +V + ++ V + + DE
Sbjct: 496 LGIYFERFD---MSEYMEKHALSRLIGAPPGYVG---FEQGGLLVETVRKHPYMVLLLDE 549
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++K L++V++ +D + + + +F N + + SN G +E
Sbjct: 550 IEKAHPDLINVLLQVMDSATLTDNTGFKANFANVVLIMTSNIGASE 595
>gi|145517578|ref|XP_001444672.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412094|emb|CAK77275.1| unnamed protein product [Paramecium tetraurelia]
Length = 752
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 420 DIQYAKDVLNKEIEGLEKVKERIIEMISVNKLKNSGQKAKGFILLLNGPPGTGKTSIAKS 479
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 182
I ++ K TSRF+ + + P + H Y + I + + +F
Sbjct: 480 IAKAL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 531
Query: 183 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNS 224
I DE+DK K LL+++ P F DH+ + + F N IF+ SN
Sbjct: 532 ILDELDKVSKHHAGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSNVIFILTSND 587
>gi|373458267|ref|ZP_09550034.1| ATPase AAA-2 domain protein [Caldithrix abyssi DSM 13497]
gi|371719931|gb|EHO41702.1| ATPase AAA-2 domain protein [Caldithrix abyssi DSM 13497]
Length = 822
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 60 TDKFIQSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLP 116
TD+ S + ++L+ ++LK+ V GQ+ AI I A++ + + L G
Sbjct: 489 TDRIALSESEKLLKMNDELKKRVIGQDDAIETITRAIRRARAGLKDPNRPIGSFLFLGPT 548
Query: 117 GTGKNYVTDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIIS 172
G GK Y+ + +F+ S ++ KFN SR+ +V + +
Sbjct: 549 GVGKTYLAKQLAEYLFENPNTLIRVDMSEYMEKFNVSRLIGSPPGYVG---YEEGGILTE 605
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 228
V ++ +FDE++K + ++++ +D ++ +++ F+NTI + SN G
Sbjct: 606 QVRRHPYSVILFDEIEKAHPDIFNILLQVLDDGILTDSLGHRVDFKNTIIIMTSNVGVKN 665
Query: 229 IMNT 232
+ NT
Sbjct: 666 LKNT 669
>gi|390448093|ref|ZP_10233716.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor aquibiodomus RA22]
gi|389666732|gb|EIM78176.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor aquibiodomus RA22]
Length = 819
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 466 LEDELKRVVYGQDAAITALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGASDM 626
>gi|402487545|ref|ZP_10834363.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CCGE 510]
gi|401813414|gb|EJT05758.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CCGE 510]
Length = 830
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEKELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|421277771|ref|ZP_15728586.1| exopolyphosphatase [Streptococcus mitis SPAR10]
gi|395873595|gb|EJG84686.1| exopolyphosphatase [Streptococcus mitis SPAR10]
Length = 810
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|424881404|ref|ZP_18305036.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392517767|gb|EIW42499.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 830
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEKELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|417936448|ref|ZP_12579762.1| Clp amino terminal domain protein [Streptococcus infantis X]
gi|343400883|gb|EGV13392.1| Clp amino terminal domain protein [Streptococcus infantis X]
Length = 810
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|335030235|ref|ZP_08523729.1| chaperone protein ClpB [Streptococcus infantis SK1076]
gi|334266666|gb|EGL85140.1| chaperone protein ClpB [Streptococcus infantis SK1076]
Length = 810
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322391259|ref|ZP_08064730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
gi|321145863|gb|EFX41253.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
Length = 819
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 515 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 574
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 575 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 628
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 629 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 678
>gi|322387004|ref|ZP_08060617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|419844139|ref|ZP_14367439.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
gi|321142148|gb|EFX37640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|385702161|gb|EIG39311.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
Length = 810
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|395787521|ref|ZP_10467120.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
birtlesii LL-WM9]
gi|395411036|gb|EJF77571.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
birtlesii LL-WM9]
Length = 783
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+++KQ V+GQ+ AIS + +K K + L P G GK V + SS
Sbjct: 457 LEKEIKQAVYGQDQAISALVSCIKLARAGLREPNKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 I--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 181
+ Y ++ T +R + I F LT+ + N A+
Sbjct: 517 LSIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGG-------LLTDAVDQN----PHAV 565
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ DE++K L ++++ +D+ + + +I F N I + +N+G +E+
Sbjct: 566 LLLDEIEKAHPELFNILLQVMDYGKLTDHNGKKIDFSNIILIMTTNAGASEM 617
>gi|257095588|ref|YP_003169229.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257048112|gb|ACV37300.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 752
Score = 40.8 bits (94), Expect = 0.55, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
+N+R L+ LK V GQ++AI + A+K + TK + L P G GK V
Sbjct: 446 TNLRNLDRDLKAVVFGQDVAIDALARAIKMARSGLGNPTKPIGSFLFSGPTGVGKTEVAK 505
Query: 126 FIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ + S ++ + SR+ +V + L + VT ++ +
Sbjct: 506 QLAYCLGNELIRFDMSEYMERHAVSRLIGAPPGYVGFDQGGL---LTEAVTKKPYSVLLL 562
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELR 237
DE++K + ++++ +DH + + + F+N + + +N+G I T F R
Sbjct: 563 DEIEKAHPDIYNILLQVMDHGTLTDNNGRKADFRNVVIIMTTNAGQEAIQKTTMGFTPSR 622
Query: 238 KSGERYITI 246
++G+ + I
Sbjct: 623 QAGDEMVEI 631
>gi|238551757|gb|ACR44938.1| heat shock protein [Eimeria tenella]
Length = 484
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 14/181 (7%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTD 125
S V L + L V GQ+ A+ + AL K L L G G GK +
Sbjct: 104 SRVLRLADILSLRVVGQDRAVKAVADALAIQRAGLSPKNKPLGTFLFLGSSGVGKTELAK 163
Query: 126 FIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
+ +F K D + H + I P + QLT V +
Sbjct: 164 AVAEEMFDSEKNLIRLDMVEYQEAHSISRLIGPPPGYMGNDEGGQLT----EAVRQKPHS 219
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ +FDEV+ K L +++P +D + N++ F N + + SN G I++++ E+
Sbjct: 220 VVLFDEVENAHKNLWSLLLPMLDEGHLSDSKGNRVDFTNCLIILTSNIGQQYILDSYKEV 279
Query: 237 R 237
R
Sbjct: 280 R 280
>gi|378825801|ref|YP_005188533.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
fredii HH103]
gi|365178853|emb|CCE95708.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
fredii HH103]
Length = 830
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|227821889|ref|YP_002825859.1| ATP-dependent specificity subunit of ClpA-ClpP serine protease
[Sinorhizobium fredii NGR234]
gi|227340888|gb|ACP25106.1| ATP-dependent specificity subunit of ClpA-ClpP serine protease
[Sinorhizobium fredii NGR234]
Length = 830
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|210111849|gb|ACJ07157.1| torsin 3A [Sus scrofa]
Length = 196
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ L+ +HGQ LA + A++ + + KALA+S HG GTGKN+V + +
Sbjct: 134 LKADLRVRLHGQHLARELVLAAVRGYLEL-PQPDKALALSFHGSSGTGKNFVARLLAENC 192
>gi|154148486|ref|YP_001406413.1| chaperone ClpB [Campylobacter hominis ATCC BAA-381]
gi|153804495|gb|ABS51502.1| chaperone ClpB [Campylobacter hominis ATCC BAA-381]
Length = 858
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E LK+ V GQ++A+ I A+K + + + L G G GK +
Sbjct: 565 IENHLKESVVGQDMALGAIAKAVKRNRAGLNSENRPIGSFLFLGPTGVGKTESAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
+F K S ++ K N SR+ +V QLT V ++ +FD
Sbjct: 625 LFDDEKALIRFDMSEYMEKINVSRLLGAAPGYVGYEEGGQLT----EAVRRKPYSVLLFD 680
Query: 186 EVDKFPKGLLDVIIPFIDH-HAVYNQ---ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E++K K + ++++ +D A N+ + F+NTI + SN G IMN + R+S
Sbjct: 681 EIEKAHKDVFNILLGILDDGRATDNKGVTVDFKNTIIILTSNIGSDIIMNLDEKNRESA 739
>gi|148984497|ref|ZP_01817785.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|387758341|ref|YP_006065320.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|418233175|ref|ZP_12859758.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|418236302|ref|ZP_12862870.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|147923274|gb|EDK74388.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|301800930|emb|CBW33589.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|353884753|gb|EHE64548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|353892534|gb|EHE72282.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|429320308|emb|CCP33650.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034183]
gi|429322128|emb|CCP35624.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994039]
gi|429323948|emb|CCP31665.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994038]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFKRYKDK---GTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F S ++ KF SR++ +V + + V ++ +FDE
Sbjct: 566 LFDEESALIRFDMSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLLFDE 622
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
V+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 623 VEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|15904041|ref|NP_359591.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae R6]
gi|421267182|ref|ZP_15718059.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
gi|15459704|gb|AAL00802.1| Class III stress response-related ATPase, truncation [Streptococcus
pneumoniae R6]
gi|395865567|gb|EJG76706.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
Length = 762
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|414157618|ref|ZP_11413915.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
gi|410872054|gb|EKS19999.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|410477532|ref|YP_006744291.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444386653|ref|ZP_21184680.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444391106|ref|ZP_21189019.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444393488|ref|ZP_21191134.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444396370|ref|ZP_21193894.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444398480|ref|ZP_21195962.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444399614|ref|ZP_21197061.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444402695|ref|ZP_21199850.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444405756|ref|ZP_21202610.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444408097|ref|ZP_21204764.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444410598|ref|ZP_21207126.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444412498|ref|ZP_21208819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444415474|ref|ZP_21211711.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444418459|ref|ZP_21214438.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444421115|ref|ZP_21216869.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444422920|ref|ZP_21218556.1| ATPase family [Streptococcus pneumoniae PNI0446]
gi|406370477|gb|AFS44167.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444254404|gb|ELU60837.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444254806|gb|ELU61182.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444255264|gb|ELU61620.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444259209|gb|ELU65525.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444259527|gb|ELU65840.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444266016|gb|ELU71993.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444268475|gb|ELU74329.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444271693|gb|ELU77444.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444272352|gb|ELU78071.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444274460|gb|ELU80107.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444277063|gb|ELU82587.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444279857|gb|ELU85241.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444281422|gb|ELU86740.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444283212|gb|ELU88417.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444287731|gb|ELU92644.1| ATPase family [Streptococcus pneumoniae PNI0446]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419818004|ref|ZP_14342123.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
gi|404465173|gb|EKA10663.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|405761809|ref|YP_006702405.1| stress response-related Clp ATPase [Streptococcus pneumoniae
SPNA45]
gi|404278698|emb|CCM09331.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPNA45]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421489259|ref|ZP_15936642.1| ATPase, AAA family [Streptococcus oralis SK304]
gi|400366262|gb|EJP19297.1| ATPase, AAA family [Streptococcus oralis SK304]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|401683711|ref|ZP_10815596.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
gi|400186751|gb|EJO20956.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421310600|ref|ZP_15761222.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
gi|395908215|gb|EJH19098.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
Length = 795
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421312955|ref|ZP_15763552.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
gi|395907707|gb|EJH18597.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
Length = 795
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421290761|ref|ZP_15741508.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|421306157|ref|ZP_15756808.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
gi|395885665|gb|EJG96687.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|395903841|gb|EJH14764.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421282187|ref|ZP_15732980.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
gi|395878634|gb|EJG89697.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
Length = 804
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 500 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 559
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 560 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 613
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 614 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 663
>gi|421271635|ref|ZP_15722485.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
gi|395865774|gb|EJG76912.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
Length = 795
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421246491|ref|ZP_15702981.1| clpC [Streptococcus pneumoniae 2082170]
gi|395616101|gb|EJG76114.1| clpC [Streptococcus pneumoniae 2082170]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421235043|ref|ZP_15691657.1| clpC [Streptococcus pneumoniae 2061617]
gi|395599201|gb|EJG59381.1| clpC [Streptococcus pneumoniae 2061617]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421228460|ref|ZP_15685153.1| clpC [Streptococcus pneumoniae 2072047]
gi|395592354|gb|EJG52625.1| clpC [Streptococcus pneumoniae 2072047]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421226057|ref|ZP_15682790.1| clpC [Streptococcus pneumoniae 2070768]
gi|395587868|gb|EJG48207.1| clpC [Streptococcus pneumoniae 2070768]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421218984|ref|ZP_15675871.1| clpC [Streptococcus pneumoniae 2070335]
gi|395581581|gb|EJG42052.1| clpC [Streptococcus pneumoniae 2070335]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421209901|ref|ZP_15666910.1| clpC [Streptococcus pneumoniae 2070005]
gi|395572071|gb|EJG32672.1| clpC [Streptococcus pneumoniae 2070005]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|385261591|ref|ZP_10039711.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
gi|385192794|gb|EIF40189.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419767404|ref|ZP_14293559.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
gi|383353144|gb|EID30769.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418976927|ref|ZP_13524766.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
gi|383350654|gb|EID28517.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418968298|ref|ZP_13519916.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
gi|383340682|gb|EID18974.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419779161|ref|ZP_14305039.1| ATPase, AAA family [Streptococcus oralis SK10]
gi|383186528|gb|EIC78996.1| ATPase, AAA family [Streptococcus oralis SK10]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419780450|ref|ZP_14306299.1| ATPase, AAA family [Streptococcus oralis SK100]
gi|383185250|gb|EIC77747.1| ATPase, AAA family [Streptococcus oralis SK100]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419781955|ref|ZP_14307766.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183596|gb|EIC76131.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419509280|ref|ZP_14048928.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
gi|379609571|gb|EHZ74309.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419535697|ref|ZP_14075191.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
gi|379561837|gb|EHZ26852.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
Length = 795
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|419476591|ref|ZP_14016422.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
gi|379557307|gb|EHZ22353.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|358465211|ref|ZP_09175162.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065969|gb|EHI76139.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418203436|ref|ZP_12839859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|353864884|gb|EHE44794.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418201146|ref|ZP_12837585.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|419524681|ref|ZP_14064250.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|421243972|ref|ZP_15700481.1| clpC [Streptococcus pneumoniae 2081074]
gi|353862579|gb|EHE42510.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|379554905|gb|EHZ19977.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|395605648|gb|EJG65767.1| clpC [Streptococcus pneumoniae 2081074]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418199056|ref|ZP_12835508.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|419452127|ref|ZP_13992107.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|419519921|ref|ZP_14059524.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
gi|353859471|gb|EHE39422.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|379621346|gb|EHZ85994.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|379638075|gb|EIA02621.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
Length = 795
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|418196859|ref|ZP_12833330.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
gi|353858891|gb|EHE38850.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418194749|ref|ZP_12831235.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|418203447|ref|ZP_12839869.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|419456451|ref|ZP_13996405.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|421286520|ref|ZP_15737291.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
gi|353854888|gb|EHE34859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|353864578|gb|EHE44490.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|379626414|gb|EHZ91032.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|395884758|gb|EJG95794.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418172353|ref|ZP_12808970.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
gi|353833556|gb|EHE13666.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
Length = 804
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 500 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 559
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 560 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 613
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 614 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 663
>gi|418147450|ref|ZP_12784222.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|418190429|ref|ZP_12826938.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
gi|353810530|gb|EHD90781.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|353851688|gb|EHE31679.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418097329|ref|ZP_12734434.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
gi|353765952|gb|EHD46493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418077429|ref|ZP_12714658.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|419483214|ref|ZP_14022997.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
gi|353745603|gb|EHD26272.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|379577746|gb|EHZ42664.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417923255|ref|ZP_12566725.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
gi|342837188|gb|EGU71386.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417916971|ref|ZP_12560537.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
gi|342827718|gb|EGU62100.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417935180|ref|ZP_12578500.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
gi|340771750|gb|EGR94265.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417847729|ref|ZP_12493691.1| chaperone protein ClpB [Streptococcus mitis SK1073]
gi|339456563|gb|EGP69154.1| chaperone protein ClpB [Streptococcus mitis SK1073]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417793983|ref|ZP_12441246.1| chaperone protein ClpB [Streptococcus oralis SK255]
gi|334271093|gb|EGL89487.1| chaperone protein ClpB [Streptococcus oralis SK255]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417687654|ref|ZP_12336921.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|418160938|ref|ZP_12797634.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|419522151|ref|ZP_14061742.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|421237290|ref|ZP_15693881.1| clpC [Streptococcus pneumoniae 2071004]
gi|332071464|gb|EGI81958.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|353820203|gb|EHE00391.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|379536138|gb|EHZ01329.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|395599867|gb|EJG60028.1| clpC [Streptococcus pneumoniae 2071004]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322377948|ref|ZP_08052436.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
gi|321281124|gb|EFX58136.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322375169|ref|ZP_08049683.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
gi|321280669|gb|EFX57708.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|315612206|ref|ZP_07887120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
gi|315315599|gb|EFU63637.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307702569|ref|ZP_07639521.1| clpC [Streptococcus oralis ATCC 35037]
gi|307623685|gb|EFO02670.1| clpC [Streptococcus oralis ATCC 35037]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307705869|ref|ZP_07642707.1| chaperone clpB 1 [Streptococcus mitis SK597]
gi|307620530|gb|EFN99628.1| chaperone clpB 1 [Streptococcus mitis SK597]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307711182|ref|ZP_07647604.1| clpC [Streptococcus mitis SK321]
gi|307617144|gb|EFN96322.1| clpC [Streptococcus mitis SK321]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307707859|ref|ZP_07644336.1| ClpC [Streptococcus mitis NCTC 12261]
gi|307616119|gb|EFN95315.1| ClpC [Streptococcus mitis NCTC 12261]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307068805|ref|YP_003877771.1| ATPase [Streptococcus pneumoniae AP200]
gi|417699571|ref|ZP_12348739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|418103933|ref|ZP_12741001.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|418126846|ref|ZP_12763748.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|418149532|ref|ZP_12786291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|418167857|ref|ZP_12804507.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|418192642|ref|ZP_12829141.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|418215401|ref|ZP_12842132.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|419454288|ref|ZP_13994255.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419472072|ref|ZP_14011928.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|419485415|ref|ZP_14025186.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|419487741|ref|ZP_14027500.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|419494317|ref|ZP_14034039.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|419504919|ref|ZP_14044582.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|419507059|ref|ZP_14046717.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|421207704|ref|ZP_15664747.1| clpC [Streptococcus pneumoniae 2090008]
gi|421230746|ref|ZP_15687404.1| clpC [Streptococcus pneumoniae 2061376]
gi|421239519|ref|ZP_15696080.1| clpC [Streptococcus pneumoniae 2071247]
gi|421241666|ref|ZP_15698207.1| clpC [Streptococcus pneumoniae 2080913]
gi|421246020|ref|ZP_15702515.1| clpC [Streptococcus pneumoniae 2081685]
gi|421250464|ref|ZP_15706914.1| clpC [Streptococcus pneumoniae 2082239]
gi|421293004|ref|ZP_15743735.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|421300205|ref|ZP_15750876.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|421315048|ref|ZP_15765632.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
gi|306410342|gb|ADM85769.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
pneumoniae AP200]
gi|332198608|gb|EGJ12691.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|353773496|gb|EHD53993.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|353794382|gb|EHD74739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|353810334|gb|EHD90586.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|353827601|gb|EHE07752.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|353854476|gb|EHE34454.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|353867691|gb|EHE47582.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|379543461|gb|EHZ08611.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|379580188|gb|EHZ45083.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|379584633|gb|EHZ49499.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|379591579|gb|EHZ56403.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|379604105|gb|EHZ68867.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|379604506|gb|EHZ69265.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379622426|gb|EHZ87061.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|395571807|gb|EJG32411.1| clpC [Streptococcus pneumoniae 2090008]
gi|395592548|gb|EJG52813.1| clpC [Streptococcus pneumoniae 2061376]
gi|395599653|gb|EJG59818.1| clpC [Streptococcus pneumoniae 2071247]
gi|395605942|gb|EJG66053.1| clpC [Streptococcus pneumoniae 2080913]
gi|395606134|gb|EJG66243.1| clpC [Streptococcus pneumoniae 2081685]
gi|395612041|gb|EJG72087.1| clpC [Streptococcus pneumoniae 2082239]
gi|395891252|gb|EJH02254.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|395899629|gb|EJH10568.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|395911632|gb|EJH22497.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|306828654|ref|ZP_07461847.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
gi|304429160|gb|EFM32247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|387627321|ref|YP_006063497.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|417695067|ref|ZP_12344251.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444381647|ref|ZP_21179853.1| ATPase family [Streptococcus pneumoniae PCS8106]
gi|444385299|ref|ZP_21183378.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|301795107|emb|CBW37577.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|332199016|gb|EGJ13097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444250579|gb|ELU57058.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|444253899|gb|ELU60346.1| ATPase family [Streptococcus pneumoniae PCS8106]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|293364467|ref|ZP_06611193.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
gi|291317313|gb|EFE57740.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
Length = 776
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 472 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 531
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 532 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 585
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 586 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 635
>gi|289168872|ref|YP_003447141.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
gi|288908439|emb|CBJ23281.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|270291875|ref|ZP_06198090.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
gi|270279403|gb|EFA25245.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|225857764|ref|YP_002739275.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
gi|225726282|gb|ACO22134.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|225859966|ref|YP_002741476.1| ClpB protein [Streptococcus pneumoniae 70585]
gi|225721797|gb|ACO17651.1| ClpB protein [Streptococcus pneumoniae 70585]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|194398319|ref|YP_002038791.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|418122270|ref|ZP_12759210.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|419481010|ref|ZP_14020811.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|419492127|ref|ZP_14031858.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|419500710|ref|ZP_14040401.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|419533394|ref|ZP_14072906.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|421276047|ref|ZP_15726873.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|194357986|gb|ACF56434.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|353790599|gb|EHD70981.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|379569176|gb|EHZ34150.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|379591208|gb|EHZ56037.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|379597822|gb|EHZ62619.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|379604297|gb|EHZ69058.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|395871801|gb|EJG82903.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|429316957|emb|CCP36686.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034156]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|182685132|ref|YP_001836879.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|303254856|ref|ZP_07340941.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|303259682|ref|ZP_07345658.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262149|ref|ZP_07348094.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264584|ref|ZP_07350503.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|303266107|ref|ZP_07352001.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|303269948|ref|ZP_07355685.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|387760270|ref|YP_006067248.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|418140535|ref|ZP_12777356.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|418181561|ref|ZP_12818126.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|419515691|ref|ZP_14055313.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|421269378|ref|ZP_15720240.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|421296966|ref|ZP_15747669.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
gi|182630466|gb|ACB91414.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|301802859|emb|CBW35637.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|302598127|gb|EFL65188.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|302636789|gb|EFL67279.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302639234|gb|EFL69693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640513|gb|EFL70923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|302644411|gb|EFL74664.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|302645954|gb|EFL76182.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|353841277|gb|EHE21334.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|353904381|gb|EHE79858.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|379634007|gb|EHZ98573.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|395866297|gb|EJG77428.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|395892540|gb|EJH03530.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|169834204|ref|YP_001695552.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
gi|168996706|gb|ACA37318.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168576066|ref|ZP_02721971.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|307128461|ref|YP_003880492.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|418075045|ref|ZP_12712291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|418087821|ref|ZP_12724986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|418133653|ref|ZP_12770519.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|418183745|ref|ZP_12820299.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|418217654|ref|ZP_12844329.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419432590|ref|ZP_13972715.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|419469997|ref|ZP_14009861.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|419496392|ref|ZP_14036106.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|419498572|ref|ZP_14038274.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|421303890|ref|ZP_15754551.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|421308397|ref|ZP_15759035.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
gi|183578054|gb|EDT98582.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|306485523|gb|ADM92392.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|353745219|gb|EHD25890.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|353755498|gb|EHD36101.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|353803889|gb|EHD84179.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|353846763|gb|EHE26791.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|353868467|gb|EHE48354.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|379542707|gb|EHZ07862.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|379591892|gb|EHZ56712.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|379597636|gb|EHZ62434.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|379626623|gb|EHZ91240.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|395898307|gb|EJH09252.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|395905200|gb|EJH16106.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168494045|ref|ZP_02718188.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|418079648|ref|ZP_12716867.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|418081852|ref|ZP_12719058.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|418090572|ref|ZP_12727722.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|418099535|ref|ZP_12736628.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|418106335|ref|ZP_12743385.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|418115713|ref|ZP_12752696.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|418117883|ref|ZP_12754849.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|418135979|ref|ZP_12772828.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|418174625|ref|ZP_12811231.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|419434821|ref|ZP_13974935.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|419441395|ref|ZP_13981435.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
gi|419465504|ref|ZP_14005392.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|183575907|gb|EDT96435.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|353745391|gb|EHD26061.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|353750174|gb|EHD30816.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|353759572|gb|EHD40156.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|353767755|gb|EHD48287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|353774297|gb|EHD54790.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|353783676|gb|EHD64103.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|353787084|gb|EHD67493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|353834711|gb|EHE14809.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|353899826|gb|EHE75393.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|379535630|gb|EHZ00828.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|379575063|gb|EHZ40000.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|379576052|gb|EHZ40981.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168489268|ref|ZP_02713467.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|221232896|ref|YP_002512050.1| stress response-related Clp ATPase [Streptococcus pneumoniae ATCC
700669]
gi|415701482|ref|ZP_11458391.1| clpC [Streptococcus pneumoniae 459-5]
gi|417680172|ref|ZP_12329565.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|418124567|ref|ZP_12761494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|418129107|ref|ZP_12765996.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|418138308|ref|ZP_12775142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|418179340|ref|ZP_12815917.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|418235382|ref|ZP_12861955.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|419474282|ref|ZP_14014127.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|421279960|ref|ZP_15730763.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|421295104|ref|ZP_15745822.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
gi|183572254|gb|EDT92782.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|220675358|emb|CAR69957.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae ATCC 700669]
gi|332071637|gb|EGI82130.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|353794179|gb|EHD74537.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|353797157|gb|EHD77494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|353840854|gb|EHE20916.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|353885105|gb|EHE64895.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|353899665|gb|EHE75234.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|379549351|gb|EHZ14461.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|381312670|gb|EIC53465.1| clpC [Streptococcus pneumoniae 459-5]
gi|395877188|gb|EJG88258.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|395891461|gb|EJH02456.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168486303|ref|ZP_02710811.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|418185965|ref|ZP_12822500.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|419511380|ref|ZP_14051018.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|419531233|ref|ZP_14070756.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|421214175|ref|ZP_15671125.1| clpC [Streptococcus pneumoniae 2070108]
gi|421216257|ref|ZP_15673174.1| clpC [Streptococcus pneumoniae 2070109]
gi|183570676|gb|EDT91204.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|353846558|gb|EHE26587.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|379570061|gb|EHZ35026.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|379630460|gb|EHZ95046.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|395577921|gb|EJG38450.1| clpC [Streptococcus pneumoniae 2070108]
gi|395578646|gb|EJG39160.1| clpC [Streptococcus pneumoniae 2070109]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168484349|ref|ZP_02709301.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|168491727|ref|ZP_02715870.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225855688|ref|YP_002737200.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225862011|ref|YP_002743520.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298229669|ref|ZP_06963350.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255666|ref|ZP_06979252.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501710|ref|YP_003723650.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|387789235|ref|YP_006254303.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|417313663|ref|ZP_12100372.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|417697393|ref|ZP_12346568.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|418084021|ref|ZP_12721213.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|418086183|ref|ZP_12723358.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|418092818|ref|ZP_12729954.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|418095001|ref|ZP_12732124.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|418101678|ref|ZP_12738757.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|418108864|ref|ZP_12745897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|418111192|ref|ZP_12748207.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|418119692|ref|ZP_12756643.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|418142741|ref|ZP_12779548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|418151709|ref|ZP_12788451.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|418153979|ref|ZP_12790713.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|418158568|ref|ZP_12795277.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|418163308|ref|ZP_12799986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|418165520|ref|ZP_12802182.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|418168216|ref|ZP_12804862.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|418177016|ref|ZP_12813603.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|418219962|ref|ZP_12846623.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|418222255|ref|ZP_12848904.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|418224411|ref|ZP_12851046.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|418228695|ref|ZP_12855308.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|418239748|ref|ZP_12866294.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419424061|ref|ZP_13964269.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|419426151|ref|ZP_13966342.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|419428262|ref|ZP_13968439.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|419437016|ref|ZP_13977097.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|419439187|ref|ZP_13979250.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|419445722|ref|ZP_13985733.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|419447883|ref|ZP_13987884.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|419449982|ref|ZP_13989975.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|419461040|ref|ZP_14000962.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|419463359|ref|ZP_14003258.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|419490013|ref|ZP_14029758.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|419502861|ref|ZP_14042539.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|419526960|ref|ZP_14066511.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|419529168|ref|ZP_14068705.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|421212045|ref|ZP_15669022.1| clpC [Streptococcus pneumoniae 2070035]
gi|421232890|ref|ZP_15689526.1| clpC [Streptococcus pneumoniae 2080076]
gi|421271771|ref|ZP_15722618.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|421288605|ref|ZP_15739363.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
gi|172042451|gb|EDT50497.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|183574069|gb|EDT94597.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225723084|gb|ACO18937.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225726430|gb|ACO22281.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298237305|gb|ADI68436.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|327388939|gb|EGE87287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|332198820|gb|EGJ12902.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|353753545|gb|EHD34168.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|353755023|gb|EHD35633.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|353761488|gb|EHD42055.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|353762538|gb|EHD43097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|353768777|gb|EHD49300.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|353775321|gb|EHD55802.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|353780303|gb|EHD60762.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|353788805|gb|EHD69201.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|353802442|gb|EHD82737.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|353812032|gb|EHD92268.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|353815305|gb|EHD95525.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|353819750|gb|EHD99939.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|353825443|gb|EHE05608.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|353827300|gb|EHE07453.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|353836135|gb|EHE16223.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|353838975|gb|EHE19051.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|353872028|gb|EHE51897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|353872650|gb|EHE52514.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|353876943|gb|EHE56788.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|353879004|gb|EHE58832.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|353890783|gb|EHE70543.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|379138977|gb|AFC95768.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|379528913|gb|EHY94166.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|379529082|gb|EHY94334.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|379535532|gb|EHZ00733.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|379555566|gb|EHZ20633.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|379562812|gb|EHZ27821.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|379569542|gb|EHZ34512.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|379584483|gb|EHZ49351.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|379584999|gb|EHZ49862.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|379598076|gb|EHZ62871.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|379611303|gb|EHZ76030.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|379611623|gb|EHZ76346.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|379616138|gb|EHZ80838.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|379616557|gb|EHZ81252.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|379620926|gb|EHZ85576.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|395571524|gb|EJG32143.1| clpC [Streptococcus pneumoniae 2070035]
gi|395593125|gb|EJG53377.1| clpC [Streptococcus pneumoniae 2080076]
gi|395877330|gb|EJG88399.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|395885237|gb|EJG96264.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|148991946|ref|ZP_01821720.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|421221379|ref|ZP_15678210.1| clpC [Streptococcus pneumoniae 2070425]
gi|421223635|ref|ZP_15680412.1| clpC [Streptococcus pneumoniae 2070531]
gi|147928995|gb|EDK80006.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|395584367|gb|EJG44760.1| clpC [Streptococcus pneumoniae 2070425]
gi|395586094|gb|EJG46472.1| clpC [Streptococcus pneumoniae 2070531]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|148988840|ref|ZP_01820255.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147925651|gb|EDK76727.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|149012833|ref|ZP_01833778.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147763264|gb|EDK70203.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|149003057|ref|ZP_01827966.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149020113|ref|ZP_01835087.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|237650487|ref|ZP_04524739.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822387|ref|ZP_04598232.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974M2]
gi|418144802|ref|ZP_12781597.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|419458740|ref|ZP_13998679.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
gi|147758798|gb|EDK65794.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147930791|gb|EDK81772.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|353807268|gb|EHD87540.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|379528736|gb|EHY93990.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|116516069|ref|YP_817407.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
gi|116076645|gb|ABJ54365.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|15902001|ref|NP_346605.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|111657990|ref|ZP_01408696.1| hypothetical protein SpneT_02000846 [Streptococcus pneumoniae
TIGR4]
gi|418131364|ref|ZP_12768244.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|418188194|ref|ZP_12824712.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|418231032|ref|ZP_12857626.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|419478855|ref|ZP_14018674.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
gi|14973705|gb|AAK76245.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|353800779|gb|EHD81088.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|353848003|gb|EHE28022.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|353884342|gb|EHE64142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|379563127|gb|EHZ28132.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
Length = 810
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|300690671|ref|YP_003751666.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum PSI07]
gi|299077731|emb|CBJ50369.2| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum PSI07]
gi|344170275|emb|CCA82674.1| ATP-dependent Clp protease ATP-binding subunit clpA [blood disease
bacterium R229]
Length = 762
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQE AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQEPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|321475126|gb|EFX86089.1| hypothetical protein DAPPUDRAFT_313073 [Daphnia pulex]
Length = 587
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE +LK+ + GQE AI+ + A++ L G G GK + + + +
Sbjct: 223 LELRLKEKIIGQEAAIATVASAIRRKEGGWIDEEHPLVFLFLGSSGIGKTELAKQVSNYL 282
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDRAIFI 183
K + F+ S + N++ V+ ++ + C A+ +
Sbjct: 283 ----NPKSSEGFIRLDMS--EYQNKHEVAKLIGSPPGYVGYEEGGQLTKKLKKCPNAVVL 336
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L V++ D + + I ++ IF+ SN EI + L+LR
Sbjct: 337 LDEVDKAHPDVLTVLLQLFDEGRITDGRGKTIFCKDAIFIMTSNLANDEIADHALQLRHE 396
Query: 240 GE 241
E
Sbjct: 397 AE 398
>gi|223940419|ref|ZP_03632272.1| ATPase AAA-2 domain protein [bacterium Ellin514]
gi|223890914|gb|EEF57422.1| ATPase AAA-2 domain protein [bacterium Ellin514]
Length = 835
Score = 40.4 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA-ISLHGLPGTGKNYVTDFIVSS 130
+E+Q+ + V GQ A+S +C AL+ + + + +L G G GK + +
Sbjct: 522 VEDQMSKVVIGQREAVSAMCKALRRSRADLKDPKRPIGTFALLGPTGVGKTLLAKTLAEQ 581
Query: 131 IF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 185
+F K S ++ KFN SR+ +V QLT V ++ +FD
Sbjct: 582 MFGDSKSLIQLDMSEYMEKFNVSRLVGSPPGYVGYEEGGQLT----EQVRRKPYSVVLFD 637
Query: 186 EVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEI 229
E++K + ++++ ++ +V ++F+NTI L SN G I
Sbjct: 638 EIEKAHPDVWNMLLQILEEGKLTDSVGRVVNFRNTIILMTSNVGSETI 685
>gi|223040429|ref|ZP_03610703.1| chaperone protein ClpB [Campylobacter rectus RM3267]
gi|222878279|gb|EEF13386.1| chaperone protein ClpB [Campylobacter rectus RM3267]
Length = 718
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYV 123
++N++ L ++LK + GQ+ A+ + A+K + + NT G G GK+ +
Sbjct: 418 DTANLKNLAQKLKSEIFGQDEAVDTLVAAIKRSYAGLKQPNTPVGVFLFTGPSGVGKSEL 477
Query: 124 TDFIVSSI---FKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACD 178
+ + ++ F+R+ S ++ K + SR+ +V I++N V
Sbjct: 478 SAALARNLGVHFERFD---MSEYMEKHSVSRLIGAPPGYVGFEE----GGILTNAVKKHP 530
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ +FDE++K +++V + D+ ++ + + F+N + + SN G E
Sbjct: 531 YSVILFDEIEKADDDMINVFLQIFDNASLTDNTGAKSDFRNAVIIMSSNLGSKE 584
>gi|365920722|ref|ZP_09445044.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Cardiobacterium valvarum F0432]
gi|364577705|gb|EHM54959.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Cardiobacterium valvarum F0432]
Length = 761
Score = 40.4 bits (93), Expect = 0.69, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
+ ++ LE LK V GQ+ AI H+ A+K N K + L P G GK V
Sbjct: 444 NQLKTLERDLKTVVFGQDDAIEHLAAAIKLSRAGLRDNEKPIGSFLFTGPTGVGKTEVCR 503
Query: 126 FIVSSIFKRYKDKGTSRFV--HKFNSRIHFP----NENHVSLYRLQLTNWIISNVTACDR 179
+ + + S ++ H + I P L LTN I N
Sbjct: 504 QLAHVLGIKLLRFDMSEYMEAHTVSRLIGAPPGYVGHEQAGL----LTNQIQKN----PH 555
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
A+ + DE++K ++++++ +DH V + +I+ +N I + SN G E+
Sbjct: 556 AVLLLDEIEKAHPDIMNLLLQIMDHGMVTDATGREINCRNLILILTSNVGAFEM 609
>gi|398353379|ref|YP_006398843.1| ClpA protein [Sinorhizobium fredii USDA 257]
gi|390128705|gb|AFL52086.1| ClpA protein [Sinorhizobium fredii USDA 257]
Length = 829
Score = 40.4 bits (93), Expect = 0.72, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFTGPTGVGKTEVAKQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH ++ + +I F+N I + +N+G +++ F +++GE
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDMARPAIGFGSSKRTGE 641
>gi|294678496|ref|YP_003579111.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhodobacter
capsulatus SB 1003]
gi|294477316|gb|ADE86704.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Rhodobacter
capsulatus SB 1003]
Length = 773
Score = 40.4 bits (93), Expect = 0.72, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE+ LK+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 459 LRDLEKTLKRVVFGQDKAIETLASAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQL 518
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+++ S ++ K SR+ +V + L + V + + DE
Sbjct: 519 ANTLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDE 575
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K + ++++ +DH + + Q+ F+N I + SN+G E + F R+
Sbjct: 576 IEKAHSDVFNILLQVMDHGKLTDHNGRQVDFRNVILIMTSNAGAAEQAKSAIGFGRERRE 635
Query: 240 GE 241
GE
Sbjct: 636 GE 637
>gi|268680245|ref|YP_003304676.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
gi|268618276|gb|ACZ12641.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
Length = 732
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK + GQ+ AI +C A+K + T + L P G GK V +
Sbjct: 439 LEAHLKAKIFGQDRAIEALCKAIKRSRAGLGNPTSPIGSFLFAGPTGVGKTEVAKQLAYE 498
Query: 131 I---FKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ F+RY S ++ K SR+ +V + I C + + DE
Sbjct: 499 LGVHFERYD---MSEYMEKHTVSRLIGAPPGYVGYDEGGQLSEAIKKHPYC---VLLLDE 552
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++K +L++++ D + + +I F+N I + SN G E
Sbjct: 553 IEKAHPDMLNILLQIFDSATLTDNNGTKIDFRNVIIIMTSNLGTKE 598
>gi|386748764|ref|YP_006221971.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Helicobacter
cetorum MIT 00-7128]
gi|384555007|gb|AFI03341.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Helicobacter
cetorum MIT 00-7128]
Length = 734
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK + QE AI I A+K + N K + L P G GK + +
Sbjct: 432 LRNLETTLKNKIFSQERAIEAISNAIKIQYCGLSQNNKPMGSFLFAGPSGVGKTQLAKEL 491
Query: 128 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
++ F+R+ D + H I PN +V + +++ + + +
Sbjct: 492 AKALDLHFERF-DMSEYKEPHSIAKLIGSPN-GYVGFEQ---GGLLVNALKKHPHCVLLL 546
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 228
DE++K + D+++ +D+ + N+ SF++ I + SN G +
Sbjct: 547 DEIEKAHADVYDLLLQVMDNATLSDNLGNKASFKHAILIMTSNIGSQD 594
>gi|418938712|ref|ZP_13492186.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium sp.
PDO1-076]
gi|375054568|gb|EHS50918.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium sp.
PDO1-076]
Length = 824
Score = 40.0 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + A+K R N + G G GK V + +S
Sbjct: 466 LEKELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 526 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F +++GE
Sbjct: 583 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSKRTGE 641
>gi|357384661|ref|YP_004899385.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Pelagibacterium halotolerans B2]
gi|351593298|gb|AEQ51635.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Pelagibacterium halotolerans B2]
Length = 794
Score = 40.0 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK+ V GQ+ AI + A+K K + + P G GK V + +
Sbjct: 465 LEANLKRVVFGQDKAIDALSSAIKLARAGLREPEKPIGSYMFTGPTGVGKTEVAKQLADT 524
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 525 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---MTDGVDQHPHSVLLLDEIEK 581
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH + + Q+ F+N I + SN G TE+ + F +R+ G+
Sbjct: 582 AHPDLFNILLQVMDHGKLTDHSGKQVDFRNVILIMTSNVGATELAKSPIGFGRVRQEGD 640
>gi|146301025|ref|YP_001195616.1| ATPase [Flavobacterium johnsoniae UW101]
gi|146155443|gb|ABQ06297.1| ATPase AAA-2 domain protein [Flavobacterium johnsoniae UW101]
Length = 819
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA----LAISLHGLPGTGKNYVTDFI 127
+EE L + V GQ+ I+ + G++ + R +KA + G GTGK + +
Sbjct: 517 IEEVLNRRVIGQDHCIATVAGSI---LEARSGLSKAGQPIASFFFLGPTGTGKTELAKSL 573
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDR 179
+F+ + RF F E+ +L ++ ++ +
Sbjct: 574 AEFLFQ--DENAIIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPY 626
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMNTF 233
+I +FDE++K + DV + +D +++++ F N I LF SN G I+NTF
Sbjct: 627 SIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTF 684
>gi|167519455|ref|XP_001744067.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777153|gb|EDQ90770.1| predicted protein [Monosiga brevicollis MX1]
Length = 486
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 130
LE++L +++ GQ+ I + A++ +N +HN L G G GK + I
Sbjct: 165 LEDRLHRYIVGQDGPIMSVAAAIRRK-ENGWHNEDHPLVFLFLGSSGVGKTELAKRIAQY 223
Query: 131 IFKRYKDKGTSRFVHKFNSRI-----HFPNENHVSL-------YRLQLTNWIISN-VTAC 177
I D + R F + F ++ VS Y +++N ++ C
Sbjct: 224 IH----DDESPRVPASFEGFVRLDMSEFQEKHEVSKLIGSPAGYVGHEDGGVLTNALSKC 279
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 233
A+ +FDEV+K +L V++ D + + + ++ +F+ SN I
Sbjct: 280 KNAVVLFDEVEKAHPDVLTVLLQLFDEGRITDGRGQTVECKDAVFIMTSNLASDVIAQHA 339
Query: 234 LELRKS--GERYIT 245
ELR++ R IT
Sbjct: 340 WELRQATCARRLIT 353
>gi|156089233|ref|XP_001612023.1| Clp amino terminal domain containing protein [Babesia bovis]
gi|154799277|gb|EDO08455.1| Clp amino terminal domain containing protein [Babesia bovis]
Length = 1005
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 33/176 (18%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
+R LE++L + V G E A+ +I A++ N + + + L G PG GK+ + +
Sbjct: 650 IRNLEQELHKSVVGHEEAVKNIAKAIRRAKTNIKNPERPIGSFLFCGPPGVGKSEIAKTL 709
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL--------------QLTNWIISN 173
+F T + K + + NE H S+ R+ QLT + N
Sbjct: 710 TKLMF-------TEDNLIKLDMSEY--NEPH-SISRILGSPPGYKGHDSGGQLTEKLRKN 759
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSG 225
++ +FDE++K + +L++++ ++ + + +SF+NTI + SN G
Sbjct: 760 PY----SVVMFDEIEKAHRNVLNILLQILEDGKLTDSKNQTVSFKNTIIIMTSNVG 811
>gi|409400667|ref|ZP_11250672.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidocella sp.
MX-AZ02]
gi|409130395|gb|EKN00165.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidocella sp.
MX-AZ02]
Length = 780
Score = 40.0 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 458 LRHLERDLKGMVFGQDAAIEALSAAMKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVARQL 517
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + + I C + + DE
Sbjct: 518 ASTLGIELTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGMLTDAIDQHPHC---VLLLDE 574
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 575 IEKAHPDLFNILLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADM 621
>gi|417677915|ref|ZP_12327318.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|418156168|ref|ZP_12792889.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|418226569|ref|ZP_12853193.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
gi|332071276|gb|EGI81771.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|353818357|gb|EHD98556.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|353879209|gb|EHE59036.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
Length = 810
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 227
FDEV+K + +V++ +D + + ++ F NTI + SN G T
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGAT 667
>gi|312623528|ref|YP_004025141.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203995|gb|ADQ47322.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 608
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQN-------RYHNTKALAISLHGLPGTGKNYVTD 125
EE LK+ V GQE AI L+ F N RY N + G G GK +
Sbjct: 286 EEFLKRRVMGQEKAIKQAATILRRAFFNLSGSQFSRYSNRPKGVLFFAGPTGVGKTELAK 345
Query: 126 FIVSSIFKR---YKDKGTSRFVHKF-NSRIHFPNENHVSLYRL--QLTNWIISNVTACDR 179
I IF Y S F H+ + R+ +V Y + +LTN + N +
Sbjct: 346 AITELIFGSEHHYIRFDMSEFSHEHSDQRLIGAPPGYVG-YDVGGELTNAVKQNPFS--- 401
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ +FDE++K +LD+ + +D + + + F ++ +F SN G E+
Sbjct: 402 -VILFDEIEKAHPKILDIFLQILDDGRLTSGRGETVYFSESLIIFTSNLGVFEV 454
>gi|149007762|ref|ZP_01831371.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|418113531|ref|ZP_12750527.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|419467871|ref|ZP_14007749.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|419513586|ref|ZP_14053216.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|419517799|ref|ZP_14057411.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|421284339|ref|ZP_15735121.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
gi|147760757|gb|EDK67729.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|353781742|gb|EHD62183.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|379542293|gb|EHZ07451.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|379632873|gb|EHZ97443.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|379637449|gb|EIA02005.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|395879353|gb|EJG90413.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
Length = 810
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 227
FDEV+K + +V++ +D + + ++ F NTI + SN G T
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGAT 667
>gi|296446321|ref|ZP_06888267.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylosinus
trichosporium OB3b]
gi|296256222|gb|EFH03303.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylosinus
trichosporium OB3b]
Length = 820
Score = 40.0 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+E LK+ V+GQ+ A++ + A+K K + L P G GK + +S
Sbjct: 466 LDETLKRVVYGQDKAVTALTSAIKLARAGLRDPEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDSIDQHPHC---VLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +DH + + QI F+N I + +N+G ++ T
Sbjct: 583 AHSDLYNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGAADLART 629
>gi|222530641|ref|YP_002574523.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222457488|gb|ACM61750.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 608
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQN-------RYHNTKALAISLHGLPGTGKNYVTD 125
EE LK+ V GQE AI L+ F N RY N + G G GK +
Sbjct: 286 EEFLKRRVMGQEKAIKQAATILRRAFFNLSGSQFSRYSNRPKGVLFFAGPTGVGKTELAK 345
Query: 126 FIVSSIFKR---YKDKGTSRFVHKF-NSRIHFPNENHVSLYRL--QLTNWIISNVTACDR 179
I IF Y S F H+ + R+ +V Y + +LTN + N +
Sbjct: 346 AITELIFGSEHHYIRFDMSEFSHEHSDQRLIGAPPGYVG-YDVGGELTNAVKQNPFS--- 401
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ +FDE++K +LD+ + +D + + + F ++ +F SN G E+
Sbjct: 402 -VILFDEIEKAHPKILDIFLQILDDGRLTSGRGETVYFSESLIIFTSNLGVFEV 454
>gi|424918228|ref|ZP_18341592.1| type VI secretion ATPase, ClpV1 family [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854404|gb|EJB06925.1| type VI secretion ATPase, ClpV1 family [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 920
Score = 40.0 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
Q V+ L+ +LK+ V GQE AI I A++ + A+ L G+ GTGK
Sbjct: 574 QIETVKTLDIRLKERVLGQEAAIERIASAMRAARAGLSDPRRPPAVFLLVGMSGTGKTET 633
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY--------RLQLTNWIISNVT 175
+ ++ G SR++ N F E+ +S+ + V
Sbjct: 634 ALSLADMLY------GGSRYLTTINMS-EFKEEHKISMLLGSPPGYVGYGEGGVLTEAVR 686
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ + DE+DK G+ ++ D + + I F+NT + +N+G I
Sbjct: 687 RRPYGVLLLDEIDKAHPGVQEIFYQVFDKGTLRDGEGRDIDFKNTTIVMTANTGSEMI 744
>gi|255084637|ref|XP_002508893.1| predicted protein [Micromonas sp. RCC299]
gi|226524170|gb|ACO70151.1| predicted protein [Micromonas sp. RCC299]
Length = 493
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 63 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 122
F + + L ++HGQ+ A++ + A+ +H + N K L SLHG PG GK+Y
Sbjct: 34 FCREGACERVRAHLAANLHGQDTAVNLLADAVCDHVASPRPN-KPLVASLHGSPGIGKSY 92
Query: 123 VTDFIVSSIFKRYKD 137
+ +++ D
Sbjct: 93 FHQLLAQALYNATGD 107
>gi|86357528|ref|YP_469420.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|86281630|gb|ABC90693.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
Length = 829
Score = 40.0 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + +S
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 642
>gi|421599133|ref|ZP_16042403.1| ClpA-like protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404268754|gb|EJZ33164.1| ClpA-like protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 623
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + ++
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAT 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + C + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPHC---VVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L +V++ +DH + + Q++F+N I + +N+G ++
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADL 620
>gi|25011044|ref|NP_735439.1| hypothetical protein gbs0991 [Streptococcus agalactiae NEM316]
gi|23095444|emb|CAD46650.1| unknown [Streptococcus agalactiae NEM316]
Length = 639
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSSI 131
+E+L V GQE AI + A+ + + LA L G G GK + I ++
Sbjct: 319 KERLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLASFLFLGPTGVGKTELAKAIAEAL 378
Query: 132 FKRYKDKGTSRF---VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
F + RF +K + N + + QLT + C + + DE++
Sbjct: 379 FD--DEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQLTEGV-KQKPYC---VLLLDEIE 432
Query: 189 KFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTF 233
K ++D+ + +D + + ISF+NTI + +N G +I+N +
Sbjct: 433 KAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW 481
>gi|421589152|ref|ZP_16034339.1| ATP-dependent Clp protease, ATP-binding subunit protein, partial
[Rhizobium sp. Pop5]
gi|403705968|gb|EJZ21380.1| ATP-dependent Clp protease, ATP-binding subunit protein, partial
[Rhizobium sp. Pop5]
Length = 794
Score = 40.0 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N + G G GK V + SS
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 642
>gi|319946100|ref|ZP_08020348.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|417919257|ref|ZP_12562792.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
gi|319747746|gb|EFV99991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|342833947|gb|EGU68226.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
Length = 809
Score = 40.0 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 505 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKALAEV 564
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 668
>gi|226483493|emb|CAX74047.1| ClpB caseinolytic peptidase B homolog [Schistosoma japonicum]
Length = 597
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 24/199 (12%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E K + ++ LE +L++ + GQE AI + A++ Y L G
Sbjct: 228 AEEMAVKEREERRLQPLESRLRKVIVGQEAAILTVSAAIRRKENGWYDEDHPLVFLFLGS 287
Query: 116 PGTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFP-----NENHVSLYRL 164
G GK + + + + K K D + H+ + I P +E L R
Sbjct: 288 SGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTRA 347
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLF 220
T C A+ +FDE +K +L ++ D + + I+ ++ IF+
Sbjct: 348 LAT---------CPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGATINCKDAIFIM 398
Query: 221 LSNSGGTEIMNTFLELRKS 239
SN G I +LR S
Sbjct: 399 TSNVGSQVIAEHAQDLRHS 417
>gi|392331182|ref|ZP_10275797.1| hypothetical protein SCAZ3_04635 [Streptococcus canis FSL Z3-227]
gi|391418861|gb|EIQ81673.1| hypothetical protein SCAZ3_04635 [Streptococcus canis FSL Z3-227]
Length = 613
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSSI 131
+E+L V GQE AI + A+ + + LA L G G GK + I ++
Sbjct: 293 KEKLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLASFLFLGPTGVGKTELAKAIAEAL 352
Query: 132 FKRYKDKGTSRF---VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
F + RF +K + N + + QLT + C + + DE++
Sbjct: 353 FD--DEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQLTEGV-KQKPYC---VLLLDEIE 406
Query: 189 KFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTF 233
K ++D+ + +D + + ISF+NTI + +N G +I+N +
Sbjct: 407 KAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW 455
>gi|25010461|ref|NP_734856.1| hypothetical protein gbs0388 [Streptococcus agalactiae NEM316]
gi|25010773|ref|NP_735168.1| hypothetical protein gbs0718 [Streptococcus agalactiae NEM316]
gi|23094814|emb|CAD46032.1| unknown [Streptococcus agalactiae NEM316]
gi|23095127|emb|CAD46362.1| unknown [Streptococcus agalactiae NEM316]
Length = 610
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 73 EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSSI 131
+E+L V GQE AI + A+ + + LA L G G GK + I ++
Sbjct: 290 KERLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLASFLFLGPTGVGKTELAKAIAEAL 349
Query: 132 FKRYKDKGTSRF---VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
F + RF +K + N + + QLT + C + + DE++
Sbjct: 350 FD--DEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQLTEGV-KQKPYC---VLLLDEIE 403
Query: 189 KFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTF 233
K ++D+ + +D + + ISF+NTI + +N G +I+N +
Sbjct: 404 KAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW 452
>gi|418975472|ref|ZP_13523376.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
gi|383347455|gb|EID25433.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
Length = 810
Score = 40.0 bits (92), Expect = 0.93, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNILLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|294084617|ref|YP_003551375.1| ATPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664190|gb|ADE39291.1| ATPase with chaperone activity, ATP-binding subunit [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 764
Score = 40.0 bits (92), Expect = 0.94, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AIS + A+K K + L P G GK V + +
Sbjct: 450 LEDDLKRLVFGQDAAISALSSAIKLSRAGLREVEKPVGNYLFSGPTGVGKTEVARQLAEA 509
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ + S ++ + SR+ +V + L + V A+ + DE++K
Sbjct: 510 LGIKLIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDAVDQTPHAVLLLDEIEK 566
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + + F+N I + +N+G E+
Sbjct: 567 AHPDLFNILLQVMDHGKLTDNNGKSVDFRNVILIMTTNAGAQEL 610
>gi|383937727|ref|ZP_09990969.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
gi|418973172|ref|ZP_13521195.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383350169|gb|EID28063.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715378|gb|EID71342.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
Length = 810
Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|342164860|ref|YP_004769499.1| ATPase [Streptococcus pseudopneumoniae IS7493]
gi|341934742|gb|AEL11639.1| ATPase [Streptococcus pseudopneumoniae IS7493]
Length = 810
Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307710307|ref|ZP_07646748.1| clpC [Streptococcus mitis SK564]
gi|307618899|gb|EFN98034.1| clpC [Streptococcus mitis SK564]
Length = 810
Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|393769259|ref|ZP_10357787.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium sp. GXF4]
gi|392725500|gb|EIZ82837.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium sp. GXF4]
Length = 831
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L E LK+ V+GQ AI + A+K K + L P G GK + +S
Sbjct: 467 LTENLKRVVYGQPSAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 527 LGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH + + Q+ F+N I + SN+G +++ + F + +++G+
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKSAYGFTQAKRTGD 642
>gi|388456892|ref|ZP_10139187.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Fluoribacter
dumoffii Tex-KL]
Length = 754
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 451 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLRDPQKPVGCFLFAGPTGVGKTEVTRQL 510
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 511 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 567
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G E++
Sbjct: 568 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGAGELV 615
>gi|403530581|ref|YP_006665110.1| endopeptidase Clp ATP-binding subunit A [Bartonella quintana RM-11]
gi|403232652|gb|AFR26395.1| endopeptidase Clp ATP-binding chain a [Bartonella quintana RM-11]
Length = 783
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQRPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L ++++ +D+ + + +I F+N I + +N+G +++ + F +++ G+
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGNVQRDGDD 633
Query: 243 YITIH 247
TI+
Sbjct: 634 IETIN 638
>gi|417850359|ref|ZP_12496268.1| chaperone protein ClpB [Streptococcus mitis SK1080]
gi|339452754|gb|EGP65376.1| chaperone protein ClpB [Streptococcus mitis SK1080]
Length = 810
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ A+S I A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQNQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|420240527|ref|ZP_14744744.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF080]
gi|398076181|gb|EJL67260.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF080]
Length = 843
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 467 LEKELRSVVYGQDVAIEALSTAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVEILRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ F +++GE
Sbjct: 584 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 642
>gi|10442010|gb|AAG17282.1|AF254897_1 ClpA-like protein [Bradyrhizobium japonicum USDA 110]
Length = 802
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HDAIN 641
>gi|405383435|ref|ZP_11037198.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF142]
gi|397320104|gb|EJJ24549.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF142]
Length = 830
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ++AI + ++K R N A G G GK V + +S
Sbjct: 468 LEQELRSVVYGQDVAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLAAS 527
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVEILRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 643
>gi|386402343|ref|ZP_10087121.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM1253]
gi|385742969|gb|EIG63165.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM1253]
Length = 801
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HEAIN 641
>gi|383771310|ref|YP_005450375.1| ClpA-like protein [Bradyrhizobium sp. S23321]
gi|381359433|dbj|BAL76263.1| ClpA-like protein [Bradyrhizobium sp. S23321]
Length = 799
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HEAIN 641
>gi|374576052|ref|ZP_09649148.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM471]
gi|374424373|gb|EHR03906.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM471]
Length = 801
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HEAIN 641
>gi|384218246|ref|YP_005609412.1| hypothetical protein BJ6T_45570 [Bradyrhizobium japonicum USDA 6]
gi|354957145|dbj|BAL09824.1| hypothetical protein BJ6T_45570 [Bradyrhizobium japonicum USDA 6]
Length = 804
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HEAIN 641
>gi|27380264|ref|NP_771793.1| ClpA-like protein [Bradyrhizobium japonicum USDA 110]
gi|27353428|dbj|BAC50418.1| ClpA-like protein [Bradyrhizobium japonicum USDA 110]
Length = 802
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSKREGDD 636
Query: 243 YITIH 247
+ I+
Sbjct: 637 HEAIN 641
>gi|385232942|ref|YP_005794284.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Ketogulonicigenium vulgare WSH-001]
gi|343461853|gb|AEM40288.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Ketogulonicigenium vulgare WSH-001]
Length = 717
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 124
++ ++ LE LK+ V GQ+ AI + A+K K + L P G GK V
Sbjct: 402 AATLKDLEPSLKRVVFGQDKAIEALASAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVA 461
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ ++ S ++ K SR+ +V + L + + ++ +
Sbjct: 462 KQLADTLGVEMLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL---LTDGIDQHPHSVLL 518
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL---EL 236
DE++K + ++++ +DH + + Q+ F+N I + SN+G + L
Sbjct: 519 LDEIEKAHPDVFNILLQVMDHGKLTDHNGRQVDFRNVILIMTSNAGAADQAREALGFGRD 578
Query: 237 RKSGERYITIH 247
R+ GE I
Sbjct: 579 RREGEDTAAIE 589
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
+S ++ LE+ L Q V GQ A+ + A+K + + + G G GK +
Sbjct: 499 ESEKLKKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKDPRRPIGSFMFLGPTGVGKTEL 558
Query: 124 TDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDR 179
+ + +F D S ++ K++ S++ +V + V
Sbjct: 559 SKALAELMFGSENDLIRVDMSEYMEKYSVSKMIGSPPGYVGY---DEGGQLSEKVRRRPY 615
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
++ +FDE++K +L++++ +D + + +ISF+NTI + SN+G I+N
Sbjct: 616 SVVLFDEIEKAHPDVLNILLQVLDDGHITDAQGRKISFKNTIIIMTSNAGAESIVN 671
>gi|270159872|ref|ZP_06188528.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae D-4968]
gi|289165374|ref|YP_003455512.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae NSW150]
gi|269988211|gb|EEZ94466.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae D-4968]
gi|288858547|emb|CBJ12428.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae NSW150]
Length = 754
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 451 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLRDPQKPVGCFLFAGPTGVGKTEVTRQL 510
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 511 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 567
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
++K + ++++ +DH + + Q F++ I + SN+G E++
Sbjct: 568 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGAGEMV 615
>gi|331086971|ref|ZP_08336046.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409421|gb|EGG88864.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 814
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYV 123
+S+ +R LE+ L++ V GQE A++ + A+K + N + G G GK +
Sbjct: 497 ESARLRKLEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRPIGSFLFLGPTGVGKTEL 556
Query: 124 TDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+ + ++F + D H + I P QL+ + N
Sbjct: 557 SKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRN----P 612
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
A+ +FDE++K + ++++ +D + + +I F+NT+ + SN+G I+
Sbjct: 613 YAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNTVIIMTSNAGAKAIV 668
>gi|325663437|ref|ZP_08151847.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470336|gb|EGC73567.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 814
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYV 123
+S+ +R LE+ L++ V GQE A++ + A+K + N + G G GK +
Sbjct: 497 ESARLRKLEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRPIGSFLFLGPTGVGKTEL 556
Query: 124 TDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+ + ++F + D H + I P QL+ + N
Sbjct: 557 SKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRN----P 612
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
A+ +FDE++K + ++++ +D + + +I F+NT+ + SN+G I+
Sbjct: 613 YAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNTVIIMTSNAGAKAIV 668
>gi|114569836|ref|YP_756516.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Maricaulis
maris MCS10]
gi|114340298|gb|ABI65578.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Maricaulis
maris MCS10]
Length = 770
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDF 126
++R LE +LK V GQ+ AIS + A+K K + L P G GK VT
Sbjct: 451 SLRNLETELKHVVFGQDEAISQLSTAIKLSRAGLREPNKPIGCYLFSGPTGVGKTEVTKQ 510
Query: 127 IVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ ++ + S ++ + SR+ +V + L I C + + D
Sbjct: 511 LADTMGVELQRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLD 567
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
E++K L ++++ +D+ + + ++ F+N I + +N+G ++
Sbjct: 568 EIEKAHPDLFNILLQVMDNGTLTDTNGKKVDFRNVILVMTTNAGASD 614
>gi|390941056|ref|YP_006404793.1| ATP-dependent Zn protease [Sulfurospirillum barnesii SES-3]
gi|390194163|gb|AFL69218.1| ATP-dependent Zn protease [Sulfurospirillum barnesii SES-3]
Length = 806
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 65 QSSNVRVL----EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
+ N RVL EE+LK+ + Q+ AI +C L H + + +AL ++ G P GK
Sbjct: 3 EEKNYRVLNISLEERLKEVLFDQDFAIEMLCKTL-GHMRLFHSKIRAL-LTFIGPPNCGK 60
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
Y+ + + ++D F + F + N L L N I+ V R+
Sbjct: 61 RYLAELL------PHEDSAIEHF-YAFQMDQYTEAYNPEEGLSLSLFNTIVDCVRKYPRS 113
Query: 181 IFIFDEVDK 189
+ F+++DK
Sbjct: 114 VLFFEDIDK 122
>gi|357028499|ref|ZP_09090533.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
amorphae CCNWGS0123]
gi|355538476|gb|EHH07721.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
amorphae CCNWGS0123]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|433775265|ref|YP_007305732.1| ATP-dependent Clp protease ATP-binding subunit clpA [Mesorhizobium
australicum WSM2073]
gi|433667280|gb|AGB46356.1| ATP-dependent Clp protease ATP-binding subunit clpA [Mesorhizobium
australicum WSM2073]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|319783683|ref|YP_004143159.1| ATP-dependent Clp protease ATP-binding protein ClpA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169571|gb|ADV13109.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|337268713|ref|YP_004612768.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
opportunistum WSM2075]
gi|336029023|gb|AEH88674.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
opportunistum WSM2075]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|13470854|ref|NP_102423.1| endopeptidase Clp ATP-binding protein subunit A [Mesorhizobium loti
MAFF303099]
gi|14021597|dbj|BAB48209.1| endopeptidase Clp ATP-binding chain A [Mesorhizobium loti
MAFF303099]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|326802961|ref|YP_004320779.1| negative regulator of genetic competence ClpC/MecB [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651240|gb|AEA01423.1| negative regulator of genetic competence ClpC/MecB [Aerococcus
urinae ACS-120-V-Col10a]
Length = 839
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 65 QSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKN 121
QS N R+ LE++L V GQ+ A++ + A+K + + + G G GK
Sbjct: 505 QSDNERLIHLEDRLHDRVKGQDEAVNAVARAIKRSRSGLGQRNRPIGSFMFLGPTGVGKT 564
Query: 122 YVTDFIVSSIFKRYK---DKGTSRFVHKFNSRIHFPNENHVSLYRL--QLTNWIISNVTA 176
+ ++F + S ++ K++S + Y QLT I +
Sbjct: 565 ELAKTFAETLFGSEEALIRLDMSEYMEKYSSSRMIGSAPGYVGYEEGGQLTEKIRQH--- 621
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
+I +FDE++K + D+++ +D + + + F+NT+ + SN G TE+
Sbjct: 622 -PYSIVLFDEIEKAHPDVFDLLLQVLDDGYITDSKGRMVDFRNTVVIMTSNIGATEL 677
>gi|402773715|ref|YP_006593252.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Methylocystis
sp. SC2]
gi|401775735|emb|CCJ08601.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Methylocystis
sp. SC2]
Length = 811
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+E L++ V+GQ+ AIS + A+K K + L P G GK + +S
Sbjct: 466 LDETLRRVVYGQDKAISALTSAIKLARAGLRDQEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAIDQHPHC---VLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +DH + + I F+N I + +N+G ++ T
Sbjct: 583 AHPDLYNILLQVMDHGKLTDHNGKTIDFRNVILIMTTNAGAQDLART 629
>gi|375091049|ref|ZP_09737352.1| hypothetical protein HMPREF9709_00214 [Helcococcus kunzii ATCC
51366]
gi|374564567|gb|EHR35855.1| hypothetical protein HMPREF9709_00214 [Helcococcus kunzii ATCC
51366]
Length = 796
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 123
++ R L++ LK V GQ+ A+ + A+K + N+ G G GK Y+
Sbjct: 480 ENEKYRDLDKNLKGVVIGQDDAVEKVAKAIKRARVGLKDENSPIGTFIFVGPTGVGKTYL 539
Query: 124 TDFIVSSIF-----------KRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIIS 172
I S+IF Y +K H + I P QLT + S
Sbjct: 540 AKQIASNIFDSDDSLIRIDMSEYMEK------HSISKLIGSPPGYVGYDEGGQLTEKVRS 593
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
N ++ +FDE++K + ++++ +D + + ++ F NTI + SN+G ++
Sbjct: 594 N----PYSVILFDEIEKAHPDVFNMLLQILDEGRLTDSQGREVDFTNTIIILTSNAGASQ 649
Query: 229 I 229
+
Sbjct: 650 L 650
>gi|68171591|ref|ZP_00544963.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis
str. Sapulpa]
gi|88658335|ref|YP_507379.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Ehrlichia
chaffeensis str. Arkansas]
gi|67998986|gb|EAM85665.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599792|gb|ABD45261.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Ehrlichia
chaffeensis str. Arkansas]
Length = 765
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
V+ LEE LK+ + GQ+ AISH+ ++K + K LA L P G GK + +
Sbjct: 461 VKNLEENLKKDIFGQDFAISHLVDSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELARQL 520
Query: 128 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ + + S ++ H + I P +V + L + +++ ++ + D
Sbjct: 521 ANHMGMKLIRFDMSEYMESHAISKIIGSP-PGYVGYDQGGL---LTDSISRHQYSVLLLD 576
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
E++K + ++++ +D+ V + +++F N + + +N+G E+
Sbjct: 577 EIEKAHSDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFEL 624
>gi|84500106|ref|ZP_00998372.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Oceanicola
batsensis HTCC2597]
gi|84392040|gb|EAQ04308.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Oceanicola
batsensis HTCC2597]
Length = 776
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+LAI + A+K K + L P G GK V + S
Sbjct: 465 LEQTLKRVVFGQDLAIESLSSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLADS 524
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ K SR+ +V + L + V + + DE++K
Sbjct: 525 LGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 581
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +D+ + + ++F+N I + SN+G +E+ + F R+ GE
Sbjct: 582 AHPDVYNILLQVMDNGQLTDHNGRTVNFRNVILIMTSNAGASELAKSAIGFGRDRREGE 640
>gi|260437577|ref|ZP_05791393.1| chaperone ClpB [Butyrivibrio crossotus DSM 2876]
gi|292809930|gb|EFF69135.1| chaperone ClpB [Butyrivibrio crossotus DSM 2876]
Length = 607
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 42/217 (19%)
Query: 53 FGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNH------FQNRYHNTK 106
+G E+ DK + ++ +EE L + V GQE AI L Q ++
Sbjct: 267 YGETESHWDK-LDLEKIKHVEEFLSKRVKGQEAAIKKASSVLSRACLGMSGIQGGSNSRP 325
Query: 107 ALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL- 164
+ G GTGK + I IF G FV +F+ S P+ + L
Sbjct: 326 KGVLFFAGPTGTGKTELAKTIAEFIF------GDESFVTRFDMSEYQQPHSDQKLLGAPP 379
Query: 165 ---------QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----I 211
QLTN I A + +FDE+DK +LD + ++ + + +
Sbjct: 380 GYIGYSDGGQLTNAI----KAKPFCVLLFDEIDKAHPSILDKFLQILEDGRITDSAGETM 435
Query: 212 SFQNTIFLFLSNSG--GTEIMNTFLELRKSGERYITI 246
F + +F SN G G E ++G+RY TI
Sbjct: 436 YFSEALIIFTSNLGVVGQEA--------ETGKRYQTI 464
>gi|383458524|ref|YP_005372513.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Corallococcus
coralloides DSM 2259]
gi|380732358|gb|AFE08360.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Corallococcus
coralloides DSM 2259]
Length = 760
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
++ L+++LK ++GQ+ AI + GA+K K + L P G GK + +
Sbjct: 454 IQNLDKELKGVIYGQDKAIEEMVGAIKLSRSGLRAPEKPIGSFLFSGPTGVGKTELAKQL 513
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S+ + S + K SR+ +V + L + V A+ + DE
Sbjct: 514 AQSLGVEFLRFDMSEYSEKHTVSRLIGAPPGYVGFDQGGL---LTDAVRKHPYAVLVLDE 570
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++K L ++++ +DH + + + F+N I + +N+G E+
Sbjct: 571 IEKAHPDLFNILLQVMDHATLTDNNGRKADFRNIILILTTNAGAQEM 617
>gi|170747221|ref|YP_001753481.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium radiotolerans JCM 2831]
gi|170653743|gb|ACB22798.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium radiotolerans JCM 2831]
Length = 828
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L E LK+ V+GQ AI + A+K K + L P G GK + +S
Sbjct: 466 LTENLKRVVYGQPNAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +DH + + Q+ F+N I + SN+G +++ F + ++SG+
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKAAYGFTQSKRSGD 641
>gi|414156400|ref|ZP_11412702.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
gi|410870047|gb|EKS18006.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|419799744|ref|ZP_14325072.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
gi|385697244|gb|EIG27681.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|417918051|ref|ZP_12561604.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
gi|342829042|gb|EGU63403.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|322390400|ref|ZP_08063922.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
gi|321142911|gb|EFX38367.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|312866922|ref|ZP_07727135.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
gi|311097705|gb|EFQ55936.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|337282845|ref|YP_004622316.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|387880440|ref|YP_006310743.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
gi|335370438|gb|AEH56388.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|386793888|gb|AFJ26923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
Length = 809
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 60 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 116
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 117 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 169
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 170 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 226 GTEI 229
T +
Sbjct: 665 ATAL 668
>gi|92117937|ref|YP_577666.1| ATPase [Nitrobacter hamburgensis X14]
gi|91800831|gb|ABE63206.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Nitrobacter
hamburgensis X14]
Length = 799
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+LAI + A+K K + L P G GK V + ++
Sbjct: 462 LEQTLKRVVFGQDLAIEALTAAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAA 521
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 MGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 578
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
+ +V++ +DH + + Q++F+N I + +N+G +++ F ++ G+
Sbjct: 579 AHPDVYNVLLQIMDHGRLTDHHGKQVNFRNVILIMTTNAGASDMAKAAFGFTRSKREGDD 638
Query: 243 YITIH 247
+ I+
Sbjct: 639 HEAIN 643
>gi|395780029|ref|ZP_10460496.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
washoensis 085-0475]
gi|395419296|gb|EJF85596.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
washoensis 085-0475]
Length = 783
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRELDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++R+ G+
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKVRRDGDD 633
Query: 243 YITIH 247
I+
Sbjct: 634 IAAIN 638
>gi|423711355|ref|ZP_17685675.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
washoensis Sb944nv]
gi|395415269|gb|EJF81704.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
washoensis Sb944nv]
Length = 783
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRELDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++R+ G+
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKVRRDGDD 633
Query: 243 YITIH 247
I+
Sbjct: 634 IAAIN 638
>gi|224024704|ref|ZP_03643070.1| hypothetical protein BACCOPRO_01432, partial [Bacteroides
coprophilus DSM 18228]
gi|224017926|gb|EEF75938.1| hypothetical protein BACCOPRO_01432 [Bacteroides coprophilus DSM
18228]
Length = 731
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
+E +L++ V GQ+ AIS + A+ K + + G GTGK +T +
Sbjct: 435 IESKLRERVKGQDKAISTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAEL 494
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDRAIF 182
+F + RF F E+ +L ++ ++ + ++
Sbjct: 495 LFD--NESAMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTQIRQKPYSVV 547
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMN 231
+FDE++K + DV + +D +++++ F N+I +F SN G I++
Sbjct: 548 LFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSNIGSQWIVD 600
>gi|317051276|ref|YP_004112392.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurispirillum indicum S5]
gi|316946360|gb|ADU65836.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurispirillum indicum S5]
Length = 747
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 60 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GT 118
T + +R LEE + + + GQ AI+ + ++K + K + L P G
Sbjct: 443 TATLSEKQRLRTLEEDMLRRIFGQGNAITQLSRSIKRSRAGLGNPRKPMGSFLFTGPTGV 502
Query: 119 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTAC 177
GK V+ + + ++ S ++ K +R+ +V + L I C
Sbjct: 503 GKTEVSRQLAELLGVHFQRFDMSEYMEKHAVARLIGSPPGYVGFEQGGLLTETIRRHPHC 562
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTE 228
+ + DEV+K + ++++++ +DH + + F+N I + SN G TE
Sbjct: 563 ---VLLLDEVEKAHQDIMNILLQVMDHATLTDNTGATADFRNVILIMTSNCGVTE 614
>gi|227891941|ref|ZP_04009746.1| ATP-dependent Clp protease [Lactobacillus salivarius ATCC 11741]
gi|227866275|gb|EEJ73696.1| ATP-dependent Clp protease [Lactobacillus salivarius ATCC 11741]
Length = 636
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+ ++ +E +L + V GQE A+ + A+ TK L L G G GK +
Sbjct: 308 EEDRLKNIESRLSKRVKGQEFAVKEVSDAVTISRAGLQDETKPLGTFLFLGTTGVGKTEL 367
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISN-VTACDRAIF 182
+ +F + + S P + + L + T +++ V +I
Sbjct: 368 AKSLAEVVFD-----DENAMIRLDMSEFSQPG-SSLKLIGTRKTKGVLTEAVKHRPYSIV 421
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
+FDE++K + + D+++ +D + + ISF+NTI + +N G +I
Sbjct: 422 LFDELEKADREVHDLLLQILDDGRLTDGTGRLISFKNTIVIMTTNIGADKI 472
>gi|340504263|gb|EGR30721.1| hypothetical protein IMG5_124880 [Ichthyophthirius multifiliis]
Length = 660
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 46/185 (24%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
++ ++ LK+ ++G + I + N +N +K + L G PGTGK +
Sbjct: 125 DINYAQQVLKEEIYGLQKVKERIIQMIAINQIRNCQLKSKGFVLLLQGPPGTGKTSIAKT 184
Query: 127 IVSSIFKRYKDKGTSRFVH----------KFNSRIHFPNENHV---SLYRLQLTNWIISN 173
I ++ K SRF+ K + R + ++ + L + Q N
Sbjct: 185 IAKAL------KKESRFISFAGISDKSFFKGHKRTYIDSQPGIFIKELIKAQTMN----- 233
Query: 174 VTACDRAIFIFDEVDKFPK---------GLLDVIIP-----FIDHHAVYNQISFQNTIFL 219
+FI DEVDK + LL+++ P F DH+ ++ F N IF+
Sbjct: 234 ------PVFILDEVDKISRSNSGADPYYSLLEILNPEENGNFQDHYLDI-KVDFSNVIFI 286
Query: 220 FLSNS 224
SN+
Sbjct: 287 LTSNN 291
>gi|451343578|ref|ZP_21912649.1| ATP-dependent chaperone ClpB [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337675|gb|EMD16832.1| ATP-dependent chaperone ClpB [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 856
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGT 118
K +QS ++L E +K+ V GQ++A+S + A L++ N + G G
Sbjct: 551 KLVQSEKEKLLGLEAAIKERVIGQDMAVSKVADAILRSRAGINDVNRPIGSFLFLGPTGV 610
Query: 119 GKNYVTDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISN 173
GK V + +F K+ S ++ KF+ SR+ +V + QLT
Sbjct: 611 GKTEVAKSLAEQLFDSEKNIVRIDMSEYMEKFSVSRLIGAPPGYVGYDQGGQLT----EA 666
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEI 229
V +I + DE++K + ++++ +D + N +SF+NTI + SN G +
Sbjct: 667 VRRAPYSIVLLDEIEKAHPDVFNILLQLLDDGRLTDSKGNVVSFKNTIIIMTSNIGSQYL 726
Query: 230 M 230
+
Sbjct: 727 L 727
>gi|331267290|ref|YP_004326920.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
gi|326683962|emb|CBZ01580.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
Length = 810
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 131 IFK------RYKDKGTSRFVHKFNS-RIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF + R++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAANRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|255527632|ref|ZP_05394493.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
carboxidivorans P7]
gi|296185310|ref|ZP_06853720.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Clostridium
carboxidivorans P7]
gi|255508674|gb|EET85053.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
carboxidivorans P7]
gi|296050144|gb|EFG89568.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Clostridium
carboxidivorans P7]
Length = 739
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
L+E +K+ + GQE AI I A+K K +A L G G GK + + +
Sbjct: 447 LDETIKKEIFGQEKAIESIVTAIKKSRAGFNDENKTVANLLFVGPTGVGKTEICKQVSKA 506
Query: 131 I--------FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
+ Y++K T +R+ +V L + C +
Sbjct: 507 LNIPLIRFDMSEYQEKHTV-------ARLIGAPPGYVGYEEGGLLTDAVRKNPYC---VL 556
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 234
+ DE++K +L+V++ +D+ + + ++ F+N I + SN+G I +
Sbjct: 557 LLDEIEKVHPDVLNVLLQLMDYATLTDSTGKKVDFRNVILIMTSNAGARSIGKPLM 612
>gi|414563081|ref|YP_006042042.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus ATCC 35246]
gi|338846146|gb|AEJ24358.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus ATCC 35246]
Length = 806
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 502 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 561
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 562 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 615
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 616 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 665
>gi|225869671|ref|YP_002745618.1| stress response-related Clp ATPase [Streptococcus equi subsp. equi
4047]
gi|225699075|emb|CAW92217.1| putative stress response-related Clp ATPase [Streptococcus equi
subsp. equi 4047]
Length = 813
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 509 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 568
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 622
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFNILLQVLDDGMLTDSRGCKVDFSNTIIIMTSNLGATAL 672
>gi|195977287|ref|YP_002122531.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195973992|gb|ACG61518.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 806
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 502 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 561
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 562 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 615
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 616 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 665
>gi|315636271|ref|ZP_07891521.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Arcobacter
butzleri JV22]
gi|315479360|gb|EFU70043.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Arcobacter
butzleri JV22]
Length = 737
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFI 127
++ LE+ +++ V GQ+ AIS I A+K + + K + L G G GK V +
Sbjct: 443 LKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGLDKKPIGSFLFTGPTGVGKTEVAKEL 502
Query: 128 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ F+R+ D H + I P + + + + +
Sbjct: 503 SLQMGIHFERF-DMSEYMEAHTVSRLIGAP----AGYVGFEQGGLLTEAIRKHPHTVLLL 557
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 228
DE++K L+ +++ +D+ + N+ FQN + + SN G TE
Sbjct: 558 DEIEKAHPDLMSILLQVMDNAQLTDNSGNKADFQNVVLIMTSNLGATE 605
>gi|357030473|ref|ZP_09092417.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
morbifer G707]
gi|356415167|gb|EHH68810.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
morbifer G707]
Length = 771
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVARQL 514
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L +V++ +DH + + + F+N I + +N+G ++ F +S
Sbjct: 572 IEKAHPDLFNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLSKEAIGFARTVRS 631
Query: 240 GE 241
GE
Sbjct: 632 GE 633
>gi|349699430|ref|ZP_08901059.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter europaeus LMG 18494]
Length = 776
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|349685903|ref|ZP_08897045.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter oboediens 174Bp2]
Length = 776
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|347760342|ref|YP_004867903.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579312|dbj|BAK83533.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 776
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|330993781|ref|ZP_08317713.1| ClpA-like protein [Gluconacetobacter sp. SXCC-1]
gi|329759049|gb|EGG75561.1| ClpA-like protein [Gluconacetobacter sp. SXCC-1]
Length = 775
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 456 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 515
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 516 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 572
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 573 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 619
>gi|299144517|ref|ZP_07037596.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517605|gb|EFI41345.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 812
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
Q+ + LE LK++V GQ+ AI+ + A+K K + + G G GK Y+
Sbjct: 488 QNKKLLHLEGNLKKNVKGQDDAIASVSKAIKRARIGLKDPNKPIGSFIFVGPTGVGKTYL 547
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 178
+ +F ++ S ++ K + S++ +V QLT+ + +N
Sbjct: 548 AKMLAKELFGSEENLLRIDMSEYMEKHSVSKLVGSPPGYVGYDEPGQLTDAVRTN----P 603
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
++ +FDE++K + ++++ +D + + +SF++T+ + SN+G + + N
Sbjct: 604 YSVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVSFKDTLIIMTSNAGASFLKN 660
>gi|401682711|ref|ZP_10814601.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
gi|400183951|gb|EJO18198.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422880952|ref|ZP_16927408.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
gi|332365652|gb|EGJ43411.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422879819|ref|ZP_16926284.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|422929663|ref|ZP_16962604.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|422932631|ref|ZP_16965562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
gi|332365230|gb|EGJ42993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|339614467|gb|EGQ19166.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|339618382|gb|EGQ22980.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422885168|ref|ZP_16931616.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
gi|332358139|gb|EGJ35971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422872444|ref|ZP_16918937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|422877466|ref|ZP_16923936.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
gi|328944694|gb|EGG38855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|332360105|gb|EGJ37919.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422863571|ref|ZP_16910202.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
gi|327472148|gb|EGF17585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422861654|ref|ZP_16908294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
gi|327467887|gb|EGF13377.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422857455|ref|ZP_16904105.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
gi|327463506|gb|EGF09825.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422853305|ref|ZP_16899969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
gi|325697317|gb|EGD39203.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422850628|ref|ZP_16897298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
gi|325695376|gb|EGD37276.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422849964|ref|ZP_16896640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
gi|325688852|gb|EGD30860.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422847700|ref|ZP_16894383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
gi|325686698|gb|EGD28724.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422825369|ref|ZP_16873548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|422856643|ref|ZP_16903299.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|422866483|ref|ZP_16913108.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
gi|324995871|gb|EGC27782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|327460002|gb|EGF06341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|327488592|gb|EGF20392.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422824550|ref|ZP_16872737.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
gi|324992599|gb|EGC24520.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422822606|ref|ZP_16870799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
gi|324989876|gb|EGC21819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|323350649|ref|ZP_08086310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
gi|322123069|gb|EFX94760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|125718981|ref|YP_001036114.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
sanguinis SK36]
gi|125498898|gb|ABN45564.1| ATP-dependent Clp protease, ATP-binding subunit, putative
[Streptococcus sanguinis SK36]
Length = 809
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|182678641|ref|YP_001832787.1| ATP-dependent Clp protease ATP-binding protein ClpA [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182634524|gb|ACB95298.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 829
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 62 KFIQSSNVRVLE---EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 117
K + + VLE E L++ V+GQ AI + A+K K + L P G
Sbjct: 453 KTVSKDDAEVLEHLTETLERVVYGQNSAIEALTAAIKLARAGLRDGEKPIGSYLFSGPTG 512
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 176
GK V + +S+ S ++ + SR+ +V + L I
Sbjct: 513 VGKTEVARQLATSLGVELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDSIDQHPH 572
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C + + DE++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 573 C---VLLLDEIEKAHPDLYNILLQVMDHGKLTDHSGKQVDFRNVILIMTTNAGAADMQRA 629
Query: 233 ---FLELRKSGE 241
F + ++ GE
Sbjct: 630 AYGFTQNKREGE 641
>gi|390351646|ref|XP_786389.2| PREDICTED: caseinolytic peptidase B protein homolog
[Strongylocentrotus purpuratus]
Length = 544
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 14/180 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L + + GQ+ AI+ + A++ L G G GK + I +
Sbjct: 179 LEQRLTEFIIGQDGAIATVAAAVRRKENGWMDEDHPLVFLFLGSSGIGKTELAKQIARYM 238
Query: 132 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
K K D + H+ I P QLT + N A+ +FD
Sbjct: 239 HKDVKNGFIRMDMSEYQEKHEVAKFIGAPPGYVGHDQGGQLTKKLKQNPN----AVVLFD 294
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
EVDK +L +++ D + + I ++ IF+ SN EI + L+LR+ +
Sbjct: 295 EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFVMTSNIASDEIASHALQLRREAK 354
>gi|399155722|ref|ZP_10755789.1| ATP-dependent Clp protease ATP-binding protein ClpA [SAR324 cluster
bacterium SCGC AAA001-C10]
Length = 748
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 60 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GT 118
TDK +R L+++L+ V GQ+ AI + A+K +H + L P G
Sbjct: 447 TDK----DKLRELKKELQMQVFGQDEAIGTLVQAIKRSRAGLHHPDHPIGSFLFTGPTGV 502
Query: 119 GKNYVTD---FIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 174
GK + FI+ F+R+ S ++ K SR+ +V + + +
Sbjct: 503 GKTELAKQLAFIMGINFERFD---MSEYMEKHTVSRLIGAPPGYVGFDQGGMLTDAVRKN 559
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
C + + DE++K + ++++ +DH + + + F+N + + SN G E+
Sbjct: 560 PHC---VVLLDEIEKAHPDIFNILLQVMDHATLTDNNGREADFRNVVLVMTSNVGAKEMG 616
Query: 231 NT 232
+T
Sbjct: 617 ST 618
>gi|427393507|ref|ZP_18887285.1| hypothetical protein HMPREF9698_01091 [Alloiococcus otitis ATCC
51267]
gi|425730508|gb|EKU93343.1| hypothetical protein HMPREF9698_01091 [Alloiococcus otitis ATCC
51267]
Length = 836
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 123
+S + LE+ L + V GQE A+ + A++ + + + G G GK +
Sbjct: 514 ESQRLLQLEDNLHERVVGQEEAVKAVSKAIRRARSGLKDPNRPIGSFIFLGPTGVGKTEL 573
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 178
+ +++F D S F+ K + SR+ +V QLT I +N
Sbjct: 574 AKTVAATLFGSEDDLIRIDMSEFMEKHSTSRLAGSPPGYVGYDEGGQLTEKIRNN----P 629
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ +FDEV+K + ++++ +D + + Q+ F+NT+ + +N G T +
Sbjct: 630 YSVVLFDEVEKAHPDVFNMLLQVLDDGQLTDGKGRQVDFKNTVLIMTTNIGATSL 684
>gi|379706161|ref|YP_005204620.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682860|gb|AEZ63149.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 808
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVT 124
S LE++L + V GQ+ AIS I A+ +N R + G G GK +
Sbjct: 498 SKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIRTGKRPIASFMFLGPTGVGKTELA 557
Query: 125 DFIVSSIFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTAC 177
+ +F R+ S ++ KF SR++ +V + + V
Sbjct: 558 KALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNK 611
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ +FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 612 PYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 667
>gi|171777589|ref|ZP_02919277.1| hypothetical protein STRINF_00112 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283198|gb|EDT48622.1| ATPase family associated with various cellular activities (AAA)
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
Length = 813
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVT 124
S LE++L + V GQ+ AIS I A+ +N R + G G GK +
Sbjct: 503 SKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIRTGKRPIASFMFLGPTGVGKTELA 562
Query: 125 DFIVSSIFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTAC 177
+ +F R+ S ++ KF SR++ +V + + V
Sbjct: 563 KALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNK 616
Query: 178 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ +FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 617 PYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 672
>gi|410996691|gb|AFV98156.1| hypothetical protein B649_09220 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 726
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 18/188 (9%)
Query: 50 LNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA 109
+ G + TD + + LE +LK V GQ+ AI + ++K F K +A
Sbjct: 417 MTGMPTSKMGTD---EREKLASLESELKALVIGQDQAIEQVVKSIKRSFAGLSAVHKPIA 473
Query: 110 ISLHGLP-GTGKNYVTDFIVSSI---FKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL 164
L P G GK + + ++ F+R+ S ++ K SR+ +V
Sbjct: 474 SFLFSGPTGVGKTELAKSLAETMGIYFERFD---MSEYMEKHALSRLIGAPPGYVG---F 527
Query: 165 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLF 220
+ ++ V + + DE++K L++V++ +D + + + +F N + +
Sbjct: 528 EQGGLLVETVRKHPYMVLLLDEIEKAHPDLINVLLQVMDSATLTDNTGFKANFANVVLVM 587
Query: 221 LSNSGGTE 228
SN G +E
Sbjct: 588 TSNIGASE 595
>gi|359792115|ref|ZP_09294938.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359251799|gb|EHK55125.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 820
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+ +L++ V+GQ+ AIS + A+K K + L P G GK V + +S
Sbjct: 467 LDTELRRVVYGQDTAISALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + I F+N I + +N+G +++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGASDM 627
>gi|240141658|ref|YP_002966138.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Methylobacterium
extorquens AM1]
gi|418060438|ref|ZP_12698350.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium extorquens DSM 13060]
gi|240011635|gb|ACS42861.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Methylobacterium
extorquens AM1]
gi|373566018|gb|EHP92035.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium extorquens DSM 13060]
Length = 827
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
++ L E LK+ V+GQ AI + A+K K + L P G GK +
Sbjct: 463 LKNLTENLKRVVYGQTNAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQL 522
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+S+ S ++ + SR+ +V + L I C + + DE
Sbjct: 523 AASLGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDE 579
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L ++++ +DH + + Q+ F+N I + SN+G +++ + F + +++
Sbjct: 580 IEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKSAYGFTQSKRT 639
Query: 240 GE 241
G+
Sbjct: 640 GD 641
>gi|188584528|ref|YP_001927973.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium populi BJ001]
gi|179348026|gb|ACB83438.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium populi BJ001]
Length = 832
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
++ L E LK+ V+GQ AI + A+K K + L P G GK +
Sbjct: 463 LKNLTENLKRVVYGQTNAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQL 522
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+S+ S ++ + SR+ +V + L I C + + DE
Sbjct: 523 AASLGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDE 579
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L ++++ +DH + + Q+ F+N I + SN+G +++ + F + +++
Sbjct: 580 IEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKSAYGFTQSKRT 639
Query: 240 GE 241
G+
Sbjct: 640 GD 641
>gi|163854198|ref|YP_001642241.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium extorquens PA1]
gi|218533143|ref|YP_002423959.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Methylobacterium extorquens CM4]
gi|254564166|ref|YP_003071261.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Methylobacterium
extorquens DM4]
gi|163665803|gb|ABY33170.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium extorquens PA1]
gi|218525446|gb|ACK86031.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Methylobacterium extorquens CM4]
gi|254271444|emb|CAX27459.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Methylobacterium
extorquens DM4]
Length = 827
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
++ L E LK+ V+GQ AI + A+K K + L P G GK +
Sbjct: 463 LKNLTENLKRVVYGQTNAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQL 522
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+S+ S ++ + SR+ +V + L I C + + DE
Sbjct: 523 AASLGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDE 579
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L ++++ +DH + + Q+ F+N I + SN+G +++ + F + +++
Sbjct: 580 IEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKSAYGFTQSKRT 639
Query: 240 GE 241
G+
Sbjct: 640 GD 641
>gi|395781529|ref|ZP_10461947.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
rattimassiliensis 15908]
gi|395420962|gb|EJF87220.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
rattimassiliensis 15908]
Length = 783
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK ++GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVIYGQDQAISVLVSSIKLSRAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ + S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIKLLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
LL++++ +D+ + + +I F+N I + +N+G +++ +
Sbjct: 574 AHPELLNILLQIMDYGRLTDNNGKKIDFRNIILIMTTNAGASDMAKS 620
>gi|395766773|ref|ZP_10447311.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
doshiae NCTC 12862]
gi|395415385|gb|EJF81819.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
doshiae NCTC 12862]
Length = 783
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE++LK+ ++GQ+ AIS + ++K + K + L P G GK V + S
Sbjct: 457 LEKELKRVIYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVVKQLASF 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ +V + L + V A+ + DE++K
Sbjct: 517 LGVELLRFDMSEYMERHTVARLIGAPPGYVGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++R+ G+
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKVRRDGD 632
>gi|323138621|ref|ZP_08073688.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylocystis
sp. ATCC 49242]
gi|322396109|gb|EFX98643.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylocystis
sp. ATCC 49242]
Length = 813
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L+E L++ V+GQ+ AIS + A+K K + L P G GK + +S
Sbjct: 466 LDETLRRVVYGQDKAISALTSAIKLARAGLRDQEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDSIDQHPHC---VLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +DH + + I F+N I + +N+G ++ T
Sbjct: 583 AHPDLYNILLQVMDHGKLTDHNGKTIDFRNVILIMTTNAGAQDLART 629
>gi|315638012|ref|ZP_07893197.1| chaperone protein ClpB [Campylobacter upsaliensis JV21]
gi|315481860|gb|EFU72479.1| chaperone protein ClpB [Campylobacter upsaliensis JV21]
Length = 857
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 62 KFIQSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K ++S + LE + LK+ V GQ+ A++ + A+K + +K + L G G
Sbjct: 553 KMLKSEKQKFLEVEKHLKESVIGQDRALNALAKAIKRNKAGLNEGSKPIGSFLFLGPTGV 612
Query: 119 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 174
GK + +F K S F+ K + SR+ ++ + + V
Sbjct: 613 GKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSISRLLGAPPGYIGH---EEGGELTEAV 669
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 230
++ +FDEV+K K + ++++ +D + + F+NTI + SN T IM
Sbjct: 670 RRKPYSVILFDEVEKAHKDVFNILLGILDDARATDSKGVSVDFKNTIIILTSNIASTAIM 729
Query: 231 N 231
N
Sbjct: 730 N 730
>gi|225867735|ref|YP_002743683.1| stress response-related Clp ATPase [Streptococcus equi subsp.
zooepidemicus]
gi|225701011|emb|CAW97772.1| putative stress response-related Clp ATPase [Streptococcus equi
subsp. zooepidemicus]
Length = 812
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 508 LEKKLHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 567
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 568 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 621
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 622 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 671
>gi|315452923|ref|YP_004073193.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
gi|315131975|emb|CBY82603.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
Length = 735
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 127
++ LEEQLK+ V Q+ AI H+ A+K H K +A L G G GK + +
Sbjct: 432 LKNLEEQLKKEVVAQDGAIEHLVKAIKIHASGLVGEQKPIASFLFVGPSGVGKTELAKAL 491
Query: 128 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ +R+ D + H + I P+ +V + L I C + +
Sbjct: 492 AKHMHLHLERF-DMSEYKEAHSISKLIGAPS-GYVGFDQGGLLVNAIRKHPHC---VLLL 546
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT-FLELR 237
DE++K + D+++ D+ + + + F++ I + SN+G + + FLE R
Sbjct: 547 DEIEKAHPNIYDLLLQITDNATLTDNSGRKGDFKHAILILTSNAGSDALGSLGFLEDR 604
>gi|386332649|ref|YP_006028818.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum Po82]
gi|334195097|gb|AEG68282.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum Po82]
Length = 762
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|316933621|ref|YP_004108603.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Rhodopseudomonas palustris DX-1]
gi|315601335|gb|ADU43870.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Rhodopseudomonas palustris DX-1]
Length = 795
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + SS
Sbjct: 460 LEQTLKRVVFGQDKAIEALSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLASS 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L +V++ +DH + + Q++F+N I + +N+G ++
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADL 620
>gi|83746256|ref|ZP_00943309.1| Hypothetical Protein RRSL_03844 [Ralstonia solanacearum UW551]
gi|207742559|ref|YP_002258951.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum IPO1609]
gi|300703255|ref|YP_003744857.1| ATP-dependent clp protease ATP-binding subunit Clpa [Ralstonia
solanacearum CFBP2957]
gi|421891031|ref|ZP_16321861.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum K60-1]
gi|421897593|ref|ZP_16327961.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum MolK2]
gi|83727006|gb|EAP74131.1| Hypothetical Protein RRSL_03844 [Ralstonia solanacearum UW551]
gi|206588799|emb|CAQ35762.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum MolK2]
gi|206593952|emb|CAQ60879.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum IPO1609]
gi|299070918|emb|CBJ42222.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum CFBP2957]
gi|378963617|emb|CCF98609.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum K60-1]
Length = 762
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|350270494|ref|YP_004881802.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Oscillibacter
valericigenes Sjm18-20]
gi|348595336|dbj|BAK99296.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Oscillibacter
valericigenes Sjm18-20]
Length = 772
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
L+ +L+ H+ GQ+ A+ + A++ + K ++ G G GK + + +
Sbjct: 475 LDIRLESHIVGQDEAVEAVTAAVRRNRVGISPKHKPVSFIFVGPTGVGKTELVKQLAKDL 534
Query: 132 FKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 186
F S F+ K++ SRI +V QLT I A+ +FDE
Sbjct: 535 FNTPDALIRLDMSEFMEKYSVSRIVGSPPGYVGYDEAGQLTEKIRRK----PYAVILFDE 590
Query: 187 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 225
++K +L++++ +D + + +++F+NT+ + SN+G
Sbjct: 591 IEKAHPDVLNILLQILDDGEITDSHGRKVNFENTVIVMTSNAG 633
>gi|330836209|ref|YP_004410850.1| ATP-dependent chaperone ClpB [Sphaerochaeta coccoides DSM 17374]
gi|329748112|gb|AEC01468.1| ATP-dependent chaperone ClpB [Sphaerochaeta coccoides DSM 17374]
Length = 868
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 70 RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIV 128
R LE+ L + V GQ+ AIS + A++ + + L L P G GK + +
Sbjct: 563 RNLEKILSEKVIGQDAAISAVAHAIRRNKAGIGDEHRPLGTFLFAGPTGVGKTELAKVLA 622
Query: 129 SSIF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFI 183
S +F K S ++ K++ SR+ +V + QLT + ++ +
Sbjct: 623 SFLFDDEKALTRIDMSEYMEKYSVSRLIGAPPGYVGYDQGGQLTEIVRRR----PYSVIL 678
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
FDEV+K + +V++ D + + + F NTI + SN G +I LE R +
Sbjct: 679 FDEVEKAHPDVFNVLLQVFDDGRLTDGQGRVVDFTNTIIIMTSNLGSQQI----LEARSA 734
Query: 240 GERYITI 246
E I +
Sbjct: 735 EESRIAV 741
>gi|49475406|ref|YP_033447.1| endopeptidase Clp ATP-binding chain a [Bartonella henselae str.
Houston-1]
gi|49238212|emb|CAF27422.1| Endopeptidase clp ATP-binding chain a [Bartonella henselae str.
Houston-1]
Length = 783
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK VT + SS
Sbjct: 457 LERELKHVVYGQDQAISVLVSSIKLARAGLRDADKPIGSYLFSGPTGVGKTEVTKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +D+ + + +I F+N I + +N+G +++ +
Sbjct: 574 AHSELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKS 620
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LEE L + V GQ+ AI+ I A++ + + + L G G GK + +
Sbjct: 509 LEEALHERVVGQDEAINAISRAIRRARSGLKDPRRPVGVFLFLGPTGVGKTELAKALAEY 568
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S ++ KF+ SR+ +V + + V ++ +FDE
Sbjct: 569 LFGDEKALIRFDMSEYMEKFSVSRLIGAPPGYVGY---EEGGTLTEKVRRRPFSVILFDE 625
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 232
++K + ++++ +D + + + F+NTI + SN GG EI+ +
Sbjct: 626 IEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNIGGAEIVTS 675
>gi|95930478|ref|ZP_01313214.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
gi|95133518|gb|EAT15181.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
Length = 754
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +L+Q V GQ+ AI + ++ H + L P G GK V +
Sbjct: 452 LERKLRQQVFGQDPAIHQVVRSILRARAGLGHPEHPIGSFLFAGPTGVGKTEVARQLAQQ 511
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ + S ++ K + +R+ +V + L + V + + DE++K
Sbjct: 512 LGVAFTRFDMSEYMEKHSVARLIGAPPGYVGFDQGGL---LTDAVIKKPHTVLLLDEIEK 568
Query: 190 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
L ++++ +DH ++ + F+N I + SN+G E+ T + +G
Sbjct: 569 AHPDLFNILLQIMDHGSLTDNNGKVADFRNVILIMTSNAGARELSTTPIGFNAAG 623
>gi|408380401|ref|ZP_11177985.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium
albertimagni AOL15]
gi|407745614|gb|EKF57146.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium
albertimagni AOL15]
Length = 825
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + ++K R N + G G GK V + SS
Sbjct: 466 LEKELRSVVYGQDKAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ + F +++GE
Sbjct: 583 AHPDIYNILLQVMDHGQLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSKRTGE 641
>gi|386580851|ref|YP_006077256.1| ATPase [Streptococcus suis JS14]
gi|319759043|gb|ADV70985.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis JS14]
Length = 817
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE AIS + A+ +N R + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKTELAKALAEI 569
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFATSRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT------F 233
FDEV+K + +V++ +D + + ++ F NT+ + SN G T + +
Sbjct: 624 FDEVEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGA 683
Query: 234 LELRKSGE 241
L+L KS E
Sbjct: 684 LDLSKSQE 691
>gi|262341344|ref|YP_003284199.1| ATP-dependent Clp protease, ATP-binding subunit [Blattabacterium
sp. (Blattella germanica) str. Bge]
gi|262272681|gb|ACY40589.1| ATP-dependent Clp protease, ATP-binding subunit [Blattabacterium
sp. (Blattella germanica) str. Bge]
Length = 704
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 76 LKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 134
LK+ + GQ+ A+ I A+ +N + N+ + G G GK Y+ +F
Sbjct: 400 LKEKIIGQDEAVEKIVKAVQRNRTGLKDPNSPIGSFIFLGQTGVGKTYLAKIFAKELFDS 459
Query: 135 YKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ KF+ SR+ +V QLT I ++ + DE++K
Sbjct: 460 EESLIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEII----RRKPYSVILLDEIEK 515
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ ++++ +D+ V + +I+F+NT+ +F SN+G ++
Sbjct: 516 AHHEVFNILLQMLDYGCVTDSIGRKINFKNTVIIFTSNTGTQQL 559
>gi|90409457|ref|ZP_01217518.1| negative regulator of genetic competence clpc/mecb, partial
[Psychromonas sp. CNPT3]
gi|90309437|gb|EAS37661.1| negative regulator of genetic competence clpc/mecb [Psychromonas
sp. CNPT3]
Length = 701
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 72 LEEQLKQHVHGQELAISHIC-GALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
+++ L V GQELA+ +C G L + + L ++ G G GK Y+ +
Sbjct: 318 IQQSLNNKVIGQELAVEGLCQGYLTSSIE--AQQGPRLILTFAGPSGVGKTYLASLLQEE 375
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQL------TNWIISNVTACDRAIFIF 184
+ K T + FN + + + L+ + + S V A R I +F
Sbjct: 376 LNNFEK---TGYVFNIFNMENYSDERDGMKLFGTGVQYSGGSAGMLTSEVRAQPRQIILF 432
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYNQ-----ISFQNTIFLFLSNSGGTEIMN 231
DE++K ++ ++ +D V +Q I F I +F +N G + N
Sbjct: 433 DEIEKAHSVVIQSLLSILDSGTVKDQTSQEEIDFSQCIIIFTTNLGQDVLKN 484
>gi|374107854|gb|AEY96761.1| FAEL223Cp [Ashbya gossypii FDAG1]
Length = 803
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ L + V GQ+ AIS IC A++ + + +A + G GTGK +T +
Sbjct: 484 MEQSLTKRVVGQDEAISAICQAVRLQRAGLTSSKRPIASFMFLGPTGTGKTELTKALSEF 543
Query: 131 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + RF H + I P +S QLT V A+ +
Sbjct: 544 LFD--NESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 597
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDE +K + V++ +D + + + F+NTI + SN G ++N
Sbjct: 598 FDEFEKAHPDVCKVLLQVLDDGKLTDSQGHHVDFRNTIIVMTSNVGQDILLN 649
>gi|302307871|ref|NP_984638.2| AEL223Cp [Ashbya gossypii ATCC 10895]
gi|299789209|gb|AAS52462.2| AEL223Cp [Ashbya gossypii ATCC 10895]
Length = 803
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ L + V GQ+ AIS IC A++ + + +A + G GTGK +T +
Sbjct: 484 MEQSLTKRVVGQDEAISAICQAVRLQRAGLTSSKRPIASFMFLGPTGTGKTELTKALSEF 543
Query: 131 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + RF H + I P +S QLT V A+ +
Sbjct: 544 LFD--NESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 597
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
FDE +K + V++ +D + + + F+NTI + SN G ++N
Sbjct: 598 FDEFEKAHPDVCKVLLQVLDDGKLTDSQGHHVDFRNTIIVMTSNVGQDILLN 649
>gi|270157268|ref|ZP_06185925.1| putative helicase [Legionella longbeachae D-4968]
gi|289164339|ref|YP_003454477.1| hypothetical protein LLO_0997 [Legionella longbeachae NSW150]
gi|269989293|gb|EEZ95547.1| putative helicase [Legionella longbeachae D-4968]
gi|288857512|emb|CBJ11349.1| hypothetical protein LLO_0997 [Legionella longbeachae NSW150]
Length = 1133
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL 108
F NG A D F+ S R+ K H GQ +A SH N N
Sbjct: 698 FANGMLAQTAIVD-FLGKSIPRI-----KDHTSGQAIAPSHDPERRLNEIIKAVVNLDNS 751
Query: 109 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
+++ G PG GK Y +++ + K+ K G S HK
Sbjct: 752 YLTIQGPPGAGKTYTGKHLIAELIKKGKKVGVSSNSHK 789
>gi|350566578|ref|ZP_08935234.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Peptoniphilus
indolicus ATCC 29427]
gi|348662563|gb|EGY79222.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Peptoniphilus
indolicus ATCC 29427]
Length = 815
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 32/193 (16%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
L+ LK V GQ+ AI+ + A+K K + + G G GK Y+ + +
Sbjct: 497 LDANLKSRVKGQDEAINSVSKAIKRARIGLKDPNKPIGSFIFVGPTGVGKTYLAKSLSNE 556
Query: 131 IF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+F Y +K T ++ V + + QLTN + SN
Sbjct: 557 LFGSEDNLLRIDMSEYMEKHTVAKLVGSPPGYVGYDEGG-------QLTNAVRSN----P 605
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT-- 232
+ +FDE++K + ++++ +D + + +SF++T+ + SN G + + N
Sbjct: 606 YTVVLFDEIEKAHPDVFNILLQILDEGRLTDSKGRTVSFKDTVIIMTSNVGASRLRNKSS 665
Query: 233 --FLELRKSGERY 243
F KS E Y
Sbjct: 666 MGFSTGDKSKEEY 678
>gi|453329787|dbj|GAC88035.1| Clp protease ATP-binding subunit ClpA [Gluconobacter thailandicus
NBRC 3255]
Length = 770
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L +V++ +DH + + + F+N I + +N+G ++ F +S
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLSKEAIGFGRTSRS 631
Query: 240 GE 241
GE
Sbjct: 632 GE 633
>gi|414341665|ref|YP_006983186.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
oxydans H24]
gi|411027000|gb|AFW00255.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
oxydans H24]
Length = 769
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L +V++ +DH + + + F+N I + +N+G ++ F +S
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLSKEAIGFGRTSRS 631
Query: 240 GE 241
GE
Sbjct: 632 GE 633
>gi|49474300|ref|YP_032342.1| endopeptidase Clp ATP-binding chain a [Bartonella quintana str.
Toulouse]
gi|49239804|emb|CAF26194.1| Endopeptidase clp ATP-binding chain a [Bartonella quintana str.
Toulouse]
Length = 783
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQRPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGER 242
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++ G+
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGNAQRDGDD 633
Query: 243 YITIH 247
TI+
Sbjct: 634 IETIN 638
>gi|419610085|ref|ZP_14144157.1| ATP-dependent chaperone protein ClpB [Campylobacter coli H8]
gi|380590646|gb|EIB11650.1| ATP-dependent chaperone protein ClpB [Campylobacter coli H8]
Length = 857
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419603938|ref|ZP_14138414.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9853]
gi|380581217|gb|EIB02945.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9853]
Length = 857
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419555661|ref|ZP_14093673.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
84-2]
gi|419561873|ref|ZP_14099401.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1091]
gi|419565907|ref|ZP_14103175.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1148]
gi|419573045|ref|ZP_14109856.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1891]
gi|419593019|ref|ZP_14128255.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9854]
gi|380535939|gb|EIA60610.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
84-2]
gi|380542514|gb|EIA66747.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1091]
gi|380547899|gb|EIA71813.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1148]
gi|380552317|gb|EIA75878.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1891]
gi|380571421|gb|EIA93811.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9854]
Length = 857
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419548162|ref|ZP_14086793.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2685]
gi|380527789|gb|EIA53138.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2685]
Length = 857
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419536439|ref|ZP_14075920.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
111-3]
gi|419540609|ref|ZP_14079843.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z163]
gi|419542751|ref|ZP_14081865.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2548]
gi|419568320|ref|ZP_14105460.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1417]
gi|419569871|ref|ZP_14106927.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
7--1]
gi|419571785|ref|ZP_14108728.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
132-6]
gi|419577800|ref|ZP_14114344.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
59-2]
gi|419580523|ref|ZP_14116845.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1957]
gi|419582752|ref|ZP_14118946.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1961]
gi|419585073|ref|ZP_14121136.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
202/04]
gi|419587000|ref|ZP_14122953.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
67-8]
gi|419606590|ref|ZP_14140950.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9860]
gi|419616514|ref|ZP_14150161.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z156]
gi|380516375|gb|EIA42508.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z163]
gi|380518207|gb|EIA44306.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
111-3]
gi|380522090|gb|EIA47783.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2548]
gi|380545878|gb|EIA69844.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1417]
gi|380548686|gb|EIA72585.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
7--1]
gi|380552909|gb|EIA76451.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
132-6]
gi|380556453|gb|EIA79704.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
59-2]
gi|380560564|gb|EIA83634.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1957]
gi|380562981|gb|EIA85828.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
202/04]
gi|380564533|gb|EIA87337.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1961]
gi|380565452|gb|EIA88188.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
67-8]
gi|380586748|gb|EIB08021.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9860]
gi|380595552|gb|EIB16282.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z156]
Length = 857
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|449676249|ref|XP_002157935.2| PREDICTED: caseinolytic peptidase B protein homolog [Hydra
magnipapillata]
Length = 527
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 50/195 (25%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++ ++ + GQ+ AI + A++ + L G G GK +
Sbjct: 171 LEQRFREVIVGQQGAIQAVSSAIRRRQNGWVDDQHPLVFLFLGSSGIGKTELA------- 223
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW---------------------- 169
K +RF+HK + S RL ++ +
Sbjct: 224 ------KQLARFLHK---------DVEKSFIRLDMSEYQEKHEVSKLIGSPPGYVGYEQG 268
Query: 170 --IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 223
+ + + A +A+ +FDEV+K +L V++ D + + + ++ IF+ SN
Sbjct: 269 GQLTTKLKAFPKAVVLFDEVEKAHPDVLTVMLQLFDEGRLTDGHGKTVECKDAIFVMTSN 328
Query: 224 SGGTEIMNTFLELRK 238
EI + LELR+
Sbjct: 329 LASEEIADHALELRQ 343
>gi|333984716|ref|YP_004513926.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Methylomonas
methanica MC09]
gi|333808757|gb|AEG01427.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylomonas
methanica MC09]
Length = 759
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK V GQ+ AIS + A+K TK + L P G GK VT +
Sbjct: 453 LEKNLKMLVFGQDEAISELASAIKLSRAGLRDTTKTIGSFLFAGPTGVGKTEVTRQLAKV 512
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + +T ++ + DE++K
Sbjct: 513 LGIELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEAITKHPHSVLLLDELEK 569
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
+ ++++ +DH + + + F+N I + +N+G E
Sbjct: 570 AHPDVFNLLLQVMDHGTLTDNNGRKADFRNVILIMTTNAGAEE 612
>gi|57238288|ref|YP_178631.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
gi|57167092|gb|AAW35871.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
Length = 857
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDSRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|284040482|ref|YP_003390412.1| Glu/Leu/Phe/Val dehydrogenase [Spirosoma linguale DSM 74]
gi|283819775|gb|ADB41613.1| Glu/Leu/Phe/Val dehydrogenase [Spirosoma linguale DSM 74]
Length = 424
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 14 SIICISGITGEFFTLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLE 73
+++ IS I+G ++ SGI I A +AY + N L GF G E +++ + S V VL
Sbjct: 244 TVVAISDISGGYYNKSGIDITAAVAYRNK---NKGTLEGFDGAEKISNEELLSLAVDVLV 300
Query: 74 EQLKQHVHGQELAIS 88
K+ V ++ A S
Sbjct: 301 PAAKEDVITEDNAAS 315
>gi|157738128|ref|YP_001490812.1| ATP-dependent Clp protease, ATP-binding subunit [Arcobacter
butzleri RM4018]
gi|157699982|gb|ABV68142.1| ATP-dependent Clp protease, ATP-binding subunit [Arcobacter
butzleri RM4018]
Length = 737
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFI 127
++ LE+ +++ V GQ+ AIS I A+K + + K + L G G GK V +
Sbjct: 443 LKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGLDKKPIGSFLFTGPTGVGKTEVAREL 502
Query: 128 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ F+R+ D H + I P + + + + +
Sbjct: 503 SLQMGIHFERF-DMSEYMEAHTVSRLIGAP----AGYVGFEQGGLLTEAIRKHPHTVLLL 557
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 228
DE++K L+ +++ +D+ + N+ FQN + + SN G TE
Sbjct: 558 DEIEKAHPDLMSILLQVMDNAQLTDNSGNKADFQNVVLIMTSNLGATE 605
>gi|88798704|ref|ZP_01114287.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
gi|88778467|gb|EAR09659.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
Length = 756
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK V GQ+ AI +I A+K K + L P G GK VT + S
Sbjct: 457 LERNLKMTVFGQDEAIENIASAIKLARAGLKSADKPIGSFLFAGPTGVGKTEVTKQLAES 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 517 LGVELLRFDMSEYMERHTASRLIGAPPGYVGFDQGGL---LTDGVNRHPHCVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ ++++ +DH + + + F+N I + SN+G E+
Sbjct: 574 AHPDVFNLLLQVMDHGTLTDNNGRKTDFRNVILILTSNAGAQEM 617
>gi|206889441|ref|YP_002248100.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741379|gb|ACI20436.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 816
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYV 123
+S + +EE L Q + GQ+ AI +C A++ + N + G G GK +
Sbjct: 496 ESEKLLQMEEILHQRIVGQDEAIKSVCKAIRRSRAGLKTKNRPIGSFFFLGPTGVGKTEL 555
Query: 124 TDFIVSSIFKRYKDKGT------SRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVT 175
+ +F D+ S ++ KFN S++ +V QLT I
Sbjct: 556 AKVLAEFMF---NDENALIKFDMSEYMEKFNVSKLIGAPPGYVGYEEGGQLTEKIRKR-- 610
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI-M 230
++ +FDE++K + ++++ +D + + ++ F+NTI + SN G I
Sbjct: 611 --PYSVVLFDEIEKAHPDVFNLLLQILDEGVLTDSFGRKVDFRNTIIIMTSNIGARLIEK 668
Query: 231 NTFLELRKS 239
+T L RKS
Sbjct: 669 STPLGFRKS 677
>gi|284504072|ref|YP_003406787.1| highly derived D5-like helicase-primase [Marseillevirus]
gi|282935510|gb|ADB03825.1| highly derived D5-like helicase-primase [Marseillevirus]
Length = 806
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 26 FTLSGIAIAAGIAYFSPSIINSK----FLNGFGGGEA-CTDKFIQSSNVRVLEEQLKQ-H 79
FT+ G+ FSP +S+ ++N F G +A D+ + +R L + L +
Sbjct: 466 FTVHGLCFFP----FSPEEDDSRLPIEYINTFEGFKAQPVDEGVDREKIRPLLDHLFEIW 521
Query: 80 VHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDK- 138
G + +I L + +N T + L G GK +TDF++ +F R K
Sbjct: 522 ADGSKENFDYIISWLSHIIKNPREKTGVALVILSEAQGAGKGIITDFLLDKVFGRKLGKC 581
Query: 139 --GTSRFVHKFNS 149
R VH+FNS
Sbjct: 582 IGDIERVVHRFNS 594
>gi|395792163|ref|ZP_10471601.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423714168|ref|ZP_17688427.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395421315|gb|EJF87571.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432677|gb|EJF98652.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 783
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESEKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +D+ + + +I F N I + +N+G +E+ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFCNIILIMTTNAGASELAKS 620
>gi|296116797|ref|ZP_06835403.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter hansenii ATCC 23769]
gi|295976598|gb|EFG83370.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter hansenii ATCC 23769]
Length = 779
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 9/178 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 459 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 518
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 519 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 575
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
++K L +V++ +DH + + + F+N + + +N+G ++ + ++G
Sbjct: 576 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVMLIMTTNAGAADLSKESIGFARNG 633
>gi|424782879|ref|ZP_18209724.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Campylobacter
showae CSUNSWCD]
gi|421959325|gb|EKU10935.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Campylobacter
showae CSUNSWCD]
Length = 721
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVT 124
++N++ L ++LK + GQ+ AI + A+K + + + L G G GK+ ++
Sbjct: 422 AANLKNLAQRLKSEIFGQDEAIDALVAAIKRSYAGLKQPNAPVGVFLFTGSSGVGKSELS 481
Query: 125 DFIVSSI---FKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDR 179
+ ++ F+R+ S ++ K + SR+ +V I++N V
Sbjct: 482 AALARNLGVHFERFD---MSEYMEKHSVSRLIGAPPGYVGFEE----GGILTNAVKKHPY 534
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
++ +FDE++K +++V + D ++ + + F+N + + SN G E
Sbjct: 535 SVILFDEIEKASDEMINVFLQIFDSASLTDNTGAKSDFRNAVIIMSSNLGSKE 587
>gi|291336465|gb|ADD96019.1| ATP dependent Clp protease ATP binding subunit ClpA [uncultured
organism MedDCM-OCT-S04-C138]
Length = 535
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYV 123
+ ++ L++ L++ ++GQ+ AIS + A++ + + + L P G GK +
Sbjct: 235 EKEKLKTLDDDLRRVIYGQDEAISRVVEAIRVSRAGLGQPLRPIGVFLFSGPTGVGKTEL 294
Query: 124 TDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
I ++ F R+ D H + I P +V + L + + A
Sbjct: 295 ARQIAETLGIEFIRF-DMSEYSEPHTVSRLIGSP-PGYVGFDQGGL---LTEAILRTPHA 349
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL 236
+ + DE++K L ++++ +D + + + F+N I + +N+G E+ + +
Sbjct: 350 VLVLDEIEKAHPNLFNLLLQVMDTATLTDNNGKKADFRNIILIMTTNAGARELSSGGVGF 409
Query: 237 RKSGE 241
R S E
Sbjct: 410 RNSSE 414
>gi|110633726|ref|YP_673934.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chelativorans
sp. BNC1]
gi|110284710|gb|ABG62769.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chelativorans
sp. BNC1]
Length = 819
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+ AI + A+K K + L P G GK V + +S
Sbjct: 466 LETELKRVVYGQDKAIEALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + +I F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKRIDFRNVILIMTTNAGAADM 626
>gi|158423219|ref|YP_001524511.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
gi|158330108|dbj|BAF87593.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
Length = 817
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK+ V+GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LETTLKRVVYGQDKAIEALASSIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAST 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVNLLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQTPHCVLLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 577 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADL 620
>gi|410944560|ref|ZP_11376301.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
frateurii NBRC 101659]
Length = 770
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDMEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K L +V++ +DH + + + F+N I + +N+G ++ F +S
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLSKEAIGFGRTSRS 631
Query: 240 GE 241
GE
Sbjct: 632 GE 633
>gi|222824062|ref|YP_002575636.1| ATP-dependent ClpAP protease, ATP-binding subunit ClpA
[Campylobacter lari RM2100]
gi|222539284|gb|ACM64385.1| ATP-dependent ClpAP protease, ATP-binding subunit ClpA
[Campylobacter lari RM2100]
Length = 709
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYV 123
QS ++ LE+ LKQ++ GQ+ AI +C LK + + NT G G GK +
Sbjct: 414 QSKILKNLEQNLKQNIFGQDEAIKALCSILKQSYAGLKAKNTPKGVFLFTGSSGVGKTEL 473
Query: 124 TDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDRAI 181
+ + + S + K + S++ + +V ++SN + ++
Sbjct: 474 AKNLAQILNLNLERFDMSEYSQKHDVSKLIGTSAGYVGYE----DGGLLSNSIRKNPFSV 529
Query: 182 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
+FDE++K L + + D+ ++ + + F+NTI + SN G E
Sbjct: 530 ILFDEIEKAHPDLTNTFLQIFDNASLTDNSGLKADFKNTIIIMTSNLGLKE 580
>gi|332522720|ref|ZP_08398972.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
gi|332313984|gb|EGJ26969.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
Length = 813
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LEE+L + V GQ+ AIS I A+ +N R + G G GK + +
Sbjct: 509 LEEELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEV 568
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF+ SR++ +V + V ++ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFSASRLNGAPPGYVG---YDEGGELTEKVRNRPYSVLL 622
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFTNTIIIMTSNLGATAL 672
>gi|118591080|ref|ZP_01548479.1| endopeptidase Clp ATP-binding chain A [Stappia aggregata IAM 12614]
gi|118436156|gb|EAV42798.1| endopeptidase Clp ATP-binding chain A [Stappia aggregata IAM 12614]
Length = 815
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 62 KFIQSSNVRVLE---EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 117
K + + VLE + LK+ V+GQ+ AI + A+K K + L P G
Sbjct: 450 KSVSKDDAEVLENLGKDLKRVVYGQDEAIGTLASAIKLARAGLREPDKPIGSYLFSGPTG 509
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 176
GK V + SS+ S ++ + SR+ +V + L + V
Sbjct: 510 VGKTEVARQLASSLGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 566
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
+ + DE++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 567 HPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADMAKM 626
Query: 233 ---FLELRKSGE 241
F +++ G+
Sbjct: 627 PVGFNRIKREGD 638
>gi|163815425|ref|ZP_02206798.1| hypothetical protein COPEUT_01588 [Coprococcus eutactus ATCC 27759]
gi|158449062|gb|EDP26057.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus eutactus ATCC 27759]
Length = 825
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+S + LE +L + V GQE A+S + A+K + + L G G GK +
Sbjct: 497 ESKRLEKLETELHKRVVGQEEAVSAVAKAIKRSRVGLKDPRRPIGTFLFLGPTGVGKTEL 556
Query: 124 TDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 171
+ + +F Y +K S+ + + F +S
Sbjct: 557 SKALADVVFGSEDALIRVDMSEYMEKHSVSKLIGSPPGYVGFEEGGQLS----------- 605
Query: 172 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 227
V ++ +FDE++K + ++++ +D + + ++ F+NTI + SN+G
Sbjct: 606 EKVRTNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNTGAQ 665
Query: 228 EIMN 231
I++
Sbjct: 666 RIID 669
>gi|409437269|ref|ZP_11264388.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium mesoamericanum STM3625]
gi|408750993|emb|CCM75544.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium mesoamericanum STM3625]
Length = 833
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + ++K R N + G G GK V + SS
Sbjct: 470 LEKELRSVVYGQDTAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 529
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 530 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 586
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 587 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 645
>gi|47192384|emb|CAG13880.1| unnamed protein product [Tetraodon nigroviridis]
Length = 109
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ +F+ SN EI
Sbjct: 27 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAVFIMTSNVASDEIAQH 86
Query: 233 FLELRKSGER 242
L LR+ E+
Sbjct: 87 ALRLRQEAEQ 96
>gi|329889201|ref|ZP_08267544.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
diminuta ATCC 11568]
gi|328844502|gb|EGF94066.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
diminuta ATCC 11568]
Length = 767
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVT 124
+ ++R LE LK+ V GQE AI + A+K R N A G G GK V
Sbjct: 453 TESLRELETDLKRVVFGQEQAIDQVSAAMKLARAGLRDPNKPIGAFLFSGPTGVGKTEVA 512
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ + +++ + S ++ + SR+ +V + L + V ++ +
Sbjct: 513 NQLAATLGIEMQRFDMSEYMERHTVSRLIGAPPGYVGHDQGGL---LTDAVDQHPHSVVL 569
Query: 184 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 228
DE++K + ++++ +D+ AV ++ F+N I + +N+G +
Sbjct: 570 LDEIEKAHPDVYNILLQVMDNGTLTDAVGKKVDFRNVILIMTTNAGAAD 618
>gi|270157739|ref|ZP_06186396.1| putative helicase [Legionella longbeachae D-4968]
gi|269989764|gb|EEZ96018.1| putative helicase [Legionella longbeachae D-4968]
Length = 1132
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 60 TDKFIQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 116
T K Q++ V L ++K H GQ +A SH N N +++ G P
Sbjct: 699 TGKLAQTAIVDFLGKSTPRIKGHTSGQAIAPSHEPKQRLNEIIQAVINLDNSYLTIQGPP 758
Query: 117 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 146
G GK Y +++ + KR K G S HK
Sbjct: 759 GAGKTYTGKHLIAELVKRGKKVGISSNSHK 788
>gi|218779932|ref|YP_002431250.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Desulfatibacillum alkenivorans AK-01]
gi|218761316|gb|ACL03782.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfatibacillum alkenivorans AK-01]
Length = 744
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE LK+ V GQ+ A+ + A+K + + L P G GK V + +
Sbjct: 450 LESDLKKMVFGQDEAVQTVATAIKRSRAGLASQERPVGSFLFTGPTGVGKTEVAKQLAQT 509
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ + S ++ K SR+ +V + L + C + + DE++K
Sbjct: 510 LGIAFLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGLLTDAVRRTPHC---VLLLDEIEK 566
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ + +V++ +DH + + + F+N I + SN+G E+
Sbjct: 567 AHEDIFNVLLQVMDHATLTDNNGKKADFRNAILIMTSNAGAREM 610
>gi|365858035|ref|ZP_09397995.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Acetobacteraceae bacterium AT-5844]
gi|363714818|gb|EHL98297.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Acetobacteraceae bacterium AT-5844]
Length = 782
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 462 LRTLERDLKSMVFGQDKAIEALSAAIKLARAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 521
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
++ S ++ + + SR+ +V + L + ++ A+ + DE
Sbjct: 522 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDSIDQHPHAVLLLDE 578
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L ++++ +DH + + + F+N I + +N+G ++
Sbjct: 579 IEKAHQDLYNILLQVMDHGKLTDHNGKTVDFRNVILIMTTNAGAADM 625
>gi|345880320|ref|ZP_08831874.1| hypothetical protein HMPREF9431_00538 [Prevotella oulorum F0390]
gi|343923518|gb|EGV34205.1| hypothetical protein HMPREF9431_00538 [Prevotella oulorum F0390]
Length = 853
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTG 119
D++++ +R + EQLKQ+V Q+ AI + A+ +N + N A G G G
Sbjct: 525 DEYVR---LRQMPEQLKQYVIAQDTAIEKMAKAIQRNRVGIKDPNHPIGAFMFLGPTGVG 581
Query: 120 KNYVTDFIVSSIFKRYKDKG-----TSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIIS 172
K Y+ + +F D S + FN SR+ +V QLT
Sbjct: 582 KTYLAKQLAHYMFG--SDDALIRIDMSEYAESFNASRLIGAPPGYVGYEEGGQLT----E 635
Query: 173 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
V +I + DE++K + ++++ +D + + ++ F+NT+ + SN+G +
Sbjct: 636 RVRRHPYSIVLLDEIEKAHASIYNLLLQVLDEGRLTDGNGRKVDFRNTVIIMTSNTGTRQ 695
Query: 229 I 229
+
Sbjct: 696 L 696
>gi|309781482|ref|ZP_07676218.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp.
5_7_47FAA]
gi|404396857|ref|ZP_10988651.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp.
5_2_56FAA]
gi|308919895|gb|EFP65556.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp.
5_7_47FAA]
gi|348616878|gb|EGY66370.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp.
5_2_56FAA]
Length = 762
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L ++ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAVTKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|241663929|ref|YP_002982289.1| ATP-dependent Clp protease ATP-binding protein ClpA [Ralstonia
pickettii 12D]
gi|240865956|gb|ACS63617.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia
pickettii 12D]
Length = 762
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L ++ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAVTKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|146341454|ref|YP_001206502.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Bradyrhizobium sp. ORS 278]
gi|146194260|emb|CAL78282.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Bradyrhizobium sp. ORS 278]
Length = 795
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LEQTLKRVVFGQDKAIDSLSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAST 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
L +V++ +DH + + Q++F+N I + +N+G ++ +S
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADLAKQAFGFHRS 630
>gi|145500508|ref|XP_001436237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403376|emb|CAK68840.1| unnamed protein product [Paramecium tetraurelia]
Length = 946
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 418 DIQFAKDVLDKEIEGLEKVKERIVEMISVNKLKNAGEKAKGFILLLNGPPGTGKTSIAKS 477
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 182
I ++ K TSRF+ + + P + H Y + I + + +F
Sbjct: 478 IAKAL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 529
Query: 183 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNS 224
I DE+DK K LL+++ P F DH+ + + F + IF+ SN
Sbjct: 530 ILDELDKVSKHHSGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSHVIFILTSND 585
>gi|187929803|ref|YP_001900290.1| ATP-dependent Clp protease ATP-binding protein ClpA [Ralstonia
pickettii 12J]
gi|187726693|gb|ACD27858.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia
pickettii 12J]
Length = 762
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 67 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 125
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 126 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 182
FI+ R+ D H + I P +V + L ++ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAVTKKPHC---VL 562
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT----FL 234
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN F
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMNKATIGFT 621
Query: 235 ELRKSGERYITI 246
R+ G+ I
Sbjct: 622 TAREQGDEMADI 633
>gi|326793262|ref|YP_004311083.1| ATPase AAA [Clostridium lentocellum DSM 5427]
gi|326544026|gb|ADZ85885.1| ATPase AAA-2 domain protein [Clostridium lentocellum DSM 5427]
Length = 737
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 64 IQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTG 119
I+ + V+VL E+ LK+ V GQ+ AI + ++K K +A L G G G
Sbjct: 432 IEKNEVQVLGQLEQNLKKQVFGQDKAIEQVVMSIKLSRAGLSEMNKPIASLLFVGPTGVG 491
Query: 120 KNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACD 178
K + + + + + S + K S++ ++ L I C
Sbjct: 492 KTEIAKCLANELGIKLIRFDMSEYTEKHTASKLIGSPPGYIGYEEGGLLTDAIRKSPYC- 550
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 234
+ + DE++K + + ++++ +D+ + + + F+N I + SN+G + I +
Sbjct: 551 --VLLLDEIEKAHQDIYNILLQVMDYATLTDNKGRKADFRNVILIMTSNAGASRIGKNLV 608
Query: 235 ELRKSGERYI 244
GER I
Sbjct: 609 GF---GERKI 615
>gi|312864373|ref|ZP_07724606.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
gi|311100094|gb|EFQ58305.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
Length = 815
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 61 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPG 117
+K Q+ N R L E++L + V GQ+ A+S + A++ N R + G G
Sbjct: 497 EKMTQADNQRYLNLEKELHKRVIGQDDAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTG 556
Query: 118 TGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 170
GK + + +F R+ S ++ KF SR++ +V + +
Sbjct: 557 VGKTELAKALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGEL 610
Query: 171 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 226
V ++ +FDEV+K + +V++ +D + + ++ F NTI + SN G
Sbjct: 611 TEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGA 670
Query: 227 TEI 229
T +
Sbjct: 671 TAL 673
>gi|148239084|ref|YP_001224471.1| chaperone ClpB [Synechococcus sp. WH 7803]
gi|147847623|emb|CAK23174.1| Chaperone ClpB [Synechococcus sp. WH 7803]
Length = 722
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K +QS ++L E +L + V GQ+ A++ + A++ + +A L G G
Sbjct: 408 KLVQSEMAKLLSLETELHERVVGQQQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGV 467
Query: 119 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 174
GK ++ + + +F + S ++ K SR+ +V + + V
Sbjct: 468 GKTELSKALAAQLFDSEEAMVRIDMSEYMEKHTVSRLIGAPPGYVGY---EAGGQLTEAV 524
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
A+ +FDEV+K + +V++ +D V + + F N + + SN G I+
Sbjct: 525 RRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLILTSNIGSQSIL 584
Query: 231 N 231
+
Sbjct: 585 D 585
>gi|34556772|ref|NP_906587.1| endopeptidase Clp ATP-binding chain A [Wolinella succinogenes DSM
1740]
gi|34482486|emb|CAE09487.1| ENDOPEPTIDASE CLP ATP-BINDING CHAIN A [Wolinella succinogenes]
Length = 738
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 11/164 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQ--NRYHNTKALAISLHGLPGTGKNYVTDFIVS 129
LE++L+ + GQ+ AIS I A+K N H I G G GK + +
Sbjct: 440 LEKRLQGRIFGQDSAISQIVSAIKRSRAGLNAPHRPVGSFI-FAGPTGVGKTELAKELAR 498
Query: 130 SIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 188
++ ++ S ++ K SR+ +V + + + A+ + DE++
Sbjct: 499 AMGVHFERMDMSEYMEKHTVSRLIGAPAGYVG---FEQGGLLTETIRKHPHALLLLDEIE 555
Query: 189 KFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
K LL++++ +D + + + F+N I + SN G E
Sbjct: 556 KAHPDLLNILLQVMDSATLTDNNGQKADFRNVILIMTSNVGSKE 599
>gi|344940385|ref|ZP_08779673.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylobacter
tundripaludum SV96]
gi|344261577|gb|EGW21848.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylobacter
tundripaludum SV96]
Length = 757
Score = 38.5 bits (88), Expect = 2.9, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK V GQ+ AIS + A+K K + L P G GK VT +
Sbjct: 453 LEKNLKMLVFGQDEAISALASAIKLSRAGLRDTQKTIGSFLFAGPTGVGKTEVTRQLAKV 512
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + VT A+ + DE++K
Sbjct: 513 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEQVTKHPHAVLLLDELEK 569
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
+ ++++ +DH ++ + + F+N I + +N+G E
Sbjct: 570 AHPDVFNLLLQVMDHGSLTDNNGRKADFRNIILVMTTNAGAEE 612
>gi|119476168|ref|ZP_01616520.1| ATP-binding protease component ClpA [marine gamma proteobacterium
HTCC2143]
gi|119450795|gb|EAW32029.1| ATP-binding protease component ClpA [marine gamma proteobacterium
HTCC2143]
Length = 759
Score = 38.5 bits (88), Expect = 2.9, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDF 126
+++ LE+ LK V GQ+ AIS + A+K K + + L G G GK VT+
Sbjct: 453 SLKKLEDNLKMVVFGQDKAISTLATAIKMARAGLKAVEKPIGSFLLAGPTGVGKTEVTNQ 512
Query: 127 IVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+ + S ++ + SR+ +V + L + +VT ++ + D
Sbjct: 513 LAKILGLELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTESVTKHPHSVVLLD 569
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
E++K + ++++ +DH + + + F+N IF+ +N+G +
Sbjct: 570 EIEKAHPEVFNLLLQVMDHGTLTDNNGRKADFRNVIFIMTTNAGAESV 617
>gi|403388385|ref|ZP_10930442.1| ATPase AAA-2 domain-containing protein [Clostridium sp. JC122]
Length = 867
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LEE+L++ V GQE A + + A L+ + N + G G GK + + +
Sbjct: 569 LEEELQKRVVGQEEATNAVSNAVLRARAGLKDPNRPIGSFIFLGPTGVGKTELAKTLARN 628
Query: 131 IFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 185
+F ++ S ++ K++ SR+ P +V QLT + N ++ +FD
Sbjct: 629 LFDSEENIVRIDMSEYMEKYSVSRLIGPPPGYVGYEEGGQLTEAVRRN----PYSVILFD 684
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 230
E++K + + ++ + +D + + + F+NTI + SN G + ++
Sbjct: 685 EIEKAHEDVFNIFLQILDDGRLTDNKGKTVDFKNTIIIMTSNLGSSYLL 733
>gi|209545020|ref|YP_002277249.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532697|gb|ACI52634.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
Length = 778
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 460 LRTLERDLKGMVYGQDRAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 519
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 520 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 576
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 577 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 623
>gi|162149244|ref|YP_001603705.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787821|emb|CAP57419.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
Length = 778
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 460 LRTLERDLKGMVYGQDRAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 519
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 520 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 576
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 577 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 623
>gi|406879045|gb|EKD27779.1| hypothetical protein ACD_79C00582G0001, partial [uncultured
bacterium]
Length = 502
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E L V GQ+ A+ ++ A+K N + + L L G G GK Y+ +
Sbjct: 195 MESDLSNAVVGQKEAVLNVSRAIKRSRANLQNPNRPLGSFLFLGPTGVGKTYLAKKLAEF 254
Query: 131 IFKRYKDK----GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+F +D S F KF SR+ +V + + V +I +FD
Sbjct: 255 MFGN-RDALITIDMSEFAEKFAVSRLTGSPPGYVGH---EEGGQLTEKVRRKPYSIVLFD 310
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
E++K ++D+ + ++ + + + F+NTI + SN G +IM
Sbjct: 311 EIEKAHPDIMDIFLQILEDGKLTDSLGRAVDFRNTILIMTSNIGSHKIMQ 360
>gi|363900249|ref|ZP_09326755.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|395209804|ref|ZP_10398832.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
gi|361957103|gb|EHL10415.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|394704789|gb|EJF12321.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
Length = 863
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+ S V L+E++ + + GQE A+ +C A+ TK + L G G GK +
Sbjct: 556 ERSKVLHLDEEIHKRLIGQEEAVEKVCEAILRSKAGIKDPTKPIGSFLFLGPTGVGKTEL 615
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 178
+ ++F S ++ K++ SR+ +V QLT V
Sbjct: 616 AKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGYVGYEEGGQLT----EAVRRKP 671
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFL 234
A+ +FDE++K + ++++ +D + + I F+NTI + SN G +++
Sbjct: 672 YAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTIDFKNTIIILTSNIGAQSLLDGIK 731
Query: 235 E 235
E
Sbjct: 732 E 732
>gi|146319629|ref|YP_001199341.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|253752626|ref|YP_003025767.1| stress response-related Clp ATPase [Streptococcus suis SC84]
gi|253754452|ref|YP_003027593.1| stress response-related Clp ATPase [Streptococcus suis P1/7]
gi|253756385|ref|YP_003029525.1| stress response-related Clp ATPase [Streptococcus suis BM407]
gi|386578782|ref|YP_006075188.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|386582931|ref|YP_006079335.1| ATPase [Streptococcus suis SS12]
gi|386589054|ref|YP_006085455.1| ATPase [Streptococcus suis A7]
gi|389857491|ref|YP_006359734.1| ATPase [Streptococcus suis ST1]
gi|403062391|ref|YP_006650607.1| ATPase [Streptococcus suis S735]
gi|145690435|gb|ABP90941.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|251816915|emb|CAZ52564.1| putative stress response-related Clp ATPase [Streptococcus suis
SC84]
gi|251818849|emb|CAZ56692.1| putative stress response-related Clp ATPase [Streptococcus suis
BM407]
gi|251820698|emb|CAR47460.1| putative stress response-related Clp ATPase [Streptococcus suis
P1/7]
gi|292559245|gb|ADE32246.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|353735077|gb|AER16087.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis SS12]
gi|353741209|gb|AER22216.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis ST1]
gi|354986215|gb|AER45113.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis A7]
gi|402809717|gb|AFR01209.1| ATPase [Streptococcus suis S735]
Length = 817
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE AIS + A+ +N R + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKTELAKALAEI 569
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT------F 233
FDEV+K + +V++ +D + + ++ F NT+ + SN G T + +
Sbjct: 624 FDEVEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGA 683
Query: 234 LELRKSGE 241
L+L KS E
Sbjct: 684 LDLSKSQE 691
>gi|419694075|ref|ZP_14222048.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|380671372|gb|EIB86588.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419665686|ref|ZP_14195747.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|419681645|ref|ZP_14210468.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|419686483|ref|ZP_14214915.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1798]
gi|380642775|gb|EIB60025.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|380657487|gb|EIB73553.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|380664417|gb|EIB80019.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1798]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419658027|ref|ZP_14188666.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|380633944|gb|EIB51863.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-1]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419641014|ref|ZP_14172926.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23357]
gi|380618345|gb|EIB37476.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23357]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419622189|ref|ZP_14155429.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23216]
gi|380600168|gb|EIB20512.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23216]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMVRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419613300|ref|ZP_14147148.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H9]
gi|380588218|gb|EIB09357.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H9]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419588426|ref|ZP_14124248.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
317/04]
gi|380570129|gb|EIA92559.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
317/04]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419564351|ref|ZP_14101734.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1098]
gi|419574831|ref|ZP_14111531.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1909]
gi|419579218|ref|ZP_14115635.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1948]
gi|419602342|ref|ZP_14136921.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
151-9]
gi|380542958|gb|EIA67184.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1098]
gi|380554496|gb|EIA77958.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1909]
gi|380557787|gb|EIA80985.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1948]
gi|380581332|gb|EIB03059.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
151-9]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|424846956|ref|ZP_18271540.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni NW]
gi|356485553|gb|EHI15545.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni NW]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|315124037|ref|YP_004066041.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315017759|gb|ADT65852.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|384447792|ref|YP_005655843.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|284925775|gb|ADC28127.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni IA3902]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|283955934|ref|ZP_06373424.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792594|gb|EFC31373.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1336]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|205355368|ref|ZP_03222139.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|384442843|ref|YP_005659095.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni S3]
gi|205346602|gb|EDZ33234.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|315057930|gb|ADT72259.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni S3]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|157414793|ref|YP_001482049.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81116]
gi|384441148|ref|YP_005657451.1| Chaperone protein clpB [Campylobacter jejuni subsp. jejuni M1]
gi|415746145|ref|ZP_11475300.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 327]
gi|157385757|gb|ABV52072.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|307747431|gb|ADN90701.1| Chaperone protein clpB [Campylobacter jejuni subsp. jejuni M1]
gi|315931705|gb|EFV10660.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 327]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|148925882|ref|ZP_01809569.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|145844868|gb|EDK21972.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8486]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|121613623|ref|YP_001000212.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005168|ref|ZP_02270926.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87250327|gb|EAQ73285.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|86151601|ref|ZP_01069815.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153521|ref|ZP_01071725.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85841230|gb|EAQ58478.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843247|gb|EAQ60458.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
coli RM2228]
gi|305433063|ref|ZP_07402219.1| chaperone protein ClpB [Campylobacter coli JV20]
gi|419537768|ref|ZP_14077136.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
90-3]
gi|419544161|ref|ZP_14083126.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2553]
gi|419546573|ref|ZP_14085326.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2680]
gi|419551120|ref|ZP_14089588.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2688]
gi|419552412|ref|ZP_14090718.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2692]
gi|419554346|ref|ZP_14092490.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2698]
gi|419558055|ref|ZP_14095941.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
80352]
gi|419560848|ref|ZP_14098482.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
86119]
gi|419590798|ref|ZP_14126161.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
37/05]
gi|419594938|ref|ZP_14130055.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23336]
gi|419599893|ref|ZP_14134672.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23344]
gi|419608594|ref|ZP_14142781.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H6]
gi|419614324|ref|ZP_14148110.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H56]
gi|57019101|gb|EAL55816.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
coli RM2228]
gi|304443764|gb|EFM36421.1| chaperone protein ClpB [Campylobacter coli JV20]
gi|380519654|gb|EIA45720.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
90-3]
gi|380522249|gb|EIA47941.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2680]
gi|380525483|gb|EIA50999.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2553]
gi|380529141|gb|EIA54332.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2688]
gi|380531453|gb|EIA56475.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2692]
gi|380533096|gb|EIA58056.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2698]
gi|380536577|gb|EIA61195.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
86119]
gi|380540310|gb|EIA64622.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
80352]
gi|380569941|gb|EIA92373.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
37/05]
gi|380574808|gb|EIA96901.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23336]
gi|380583871|gb|EIB05380.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23344]
gi|380585220|gb|EIB06585.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H6]
gi|380592935|gb|EIB13787.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H56]
Length = 857
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|222148870|ref|YP_002549827.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
gi|221735856|gb|ACM36819.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 830
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
L+++L+ V+GQ+ AI + A+K R N + G G GK V + +S
Sbjct: 469 LDKELRSVVYGQDDAIEALSTAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 585
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH ++ + +I F+N I + +N+G +E+ + F ++SGE
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSKRSGE 644
>gi|240850300|ref|YP_002971693.1| endopeptidase Clp ATP-binding chain A [Bartonella grahamii as4aup]
gi|240267423|gb|ACS51011.1| endopeptidase Clp ATP-binding chain A [Bartonella grahamii as4aup]
Length = 783
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISVLVSSIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++ + GE
Sbjct: 574 AHPELFNILLQVMDYGRLTDHNGKKIDFRNVILIMTTNAGASDMAKSAIGFGKVHRDGE 632
>gi|114328415|ref|YP_745572.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Granulibacter
bethesdensis CGDNIH1]
gi|114316589|gb|ABI62649.1| ATP-dependent clp protease ATP-binding subunit clpA [Granulibacter
bethesdensis CGDNIH1]
Length = 851
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 530 LRTLERDLKAMVFGQDKAIEALSAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVARQL 589
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 590 ATTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 646
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
V+K L ++++ +DH + + + F+N I + +N+G +++
Sbjct: 647 VEKAHPDLYNILLQVMDHGKLTDHNGKIVDFRNVILIMTTNAGASDM 693
>gi|357639453|ref|ZP_09137326.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|418417014|ref|ZP_12990212.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
gi|357587907|gb|EHJ57315.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|410873070|gb|EKS21006.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
Length = 813
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQ+ A+S I A++ N R + G G GK + +
Sbjct: 510 LEKELHKRVIGQDDAVSAISKAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEV 569
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIF 182
+F R+ S ++ KF SR++ +V +LT + +N ++
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNN----PYSVL 622
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+FDEV+K + +V++ +D + + ++ F NTI + SN G T I
Sbjct: 623 LFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAI 673
>gi|405377270|ref|ZP_11031214.1| DNA-binding domain-containing protein, AraC-type [Rhizobium sp.
CF142]
gi|397326233|gb|EJJ30554.1| DNA-binding domain-containing protein, AraC-type [Rhizobium sp.
CF142]
Length = 262
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 36 GIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALK 95
G++ FS S F NG G+ D +Q + +L L Q H L I HI AL+
Sbjct: 79 GLSDFSYEAGRSGF-NGLDCGQGQLDPVVQGLAMALLPA-LSQPAHASALFIDHILLALQ 136
Query: 96 NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVS 129
H RY A GL G N T F+ S
Sbjct: 137 AHLVTRYGKVNLPAERSGGLSGRQLNMATAFLAS 170
>gi|339017693|ref|ZP_08643843.1| Clp protease ATP-binding subunit ClpA [Acetobacter tropicalis NBRC
101654]
gi|338753239|dbj|GAA07147.1| Clp protease ATP-binding subunit ClpA [Acetobacter tropicalis NBRC
101654]
Length = 785
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 464 LRALERDLKGMVFGQDQAIETLSAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVARQL 523
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 524 ASTLGIELIRFDMSEYMERHSISRLLGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 580
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 229
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 581 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 627
>gi|189095390|ref|YP_001936403.1| Clp protease ATP binding subunit [Heterosigma akashiwo]
gi|157694733|gb|ABV66009.1| ATP-dependent clp protease ATP binding subunit [Heterosigma
akashiwo]
gi|157777964|gb|ABV70150.1| ATP-dependent clp protease ATP binding subunit [Heterosigma
akashiwo]
Length = 1118
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 50 LNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA 109
LN G EA DK I+ +E +L Q V GQE A++ I A+K + + +A
Sbjct: 596 LNKLGAAEA--DKLIR------MERELHQRVIGQEEAVTKISNAVKRSRVGISNPDRPIA 647
Query: 110 ISLH-GLPGTGKNYVT-----------DFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNE 156
L G G GK +T D IV Y +K T +R + + + NE
Sbjct: 648 SFLFCGPTGVGKTELTKALGDYFFGSADTIVRLDMSEYMEKHTVARLIGSPPGYVGY-NE 706
Query: 157 NHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----IS 212
QLT V ++ +FDEV+K + ++++ +D + + I
Sbjct: 707 GG------QLT----EAVRRRPFSLVLFDEVEKAHPDIFNLLLQVLDDGRLTDSQGKVID 756
Query: 213 FQNTIFLFLSNSGGTEIMNTF 233
F NTI + SN G + + F
Sbjct: 757 FTNTIIVMTSNLGSKHLDSHF 777
>gi|254502453|ref|ZP_05114604.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Labrenzia
alexandrii DFL-11]
gi|222438524|gb|EEE45203.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Labrenzia
alexandrii DFL-11]
Length = 799
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 62 KFIQSSNVRVLE---EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 117
K + + VLE + LK+ V+GQ+ AI + A+K K + L P G
Sbjct: 435 KSVSKDDAEVLENLGKDLKRVVYGQDNAIETLASAIKLARAGLREPDKPIGSYLFSGPTG 494
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 176
GK V + SS+ S ++ + SR+ +V + L + V
Sbjct: 495 VGKTEVARQLASSMGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 551
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
+ + DE++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 552 HPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADMAKM 611
Query: 233 ---FLELRKSGE 241
F +++ G+
Sbjct: 612 PVGFNRIKREGD 623
>gi|386814542|ref|ZP_10101760.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thiothrix
nivea DSM 5205]
gi|386419118|gb|EIJ32953.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thiothrix
nivea DSM 5205]
Length = 762
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 62 KFIQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 117
K + +S+++VL E LK + GQ+ AI + A+K ++K + + P G
Sbjct: 449 KSVSTSDMQVLRNLERDLKMVIFGQDKAIDQLTTAIKMARSGLRDDSKPIGSFMFAGPTG 508
Query: 118 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 176
GK V+ + + S ++ + SR+ +V L + V
Sbjct: 509 VGKTEVSKQLAQRLGIELLRFDMSEYMERHTVSRLIGAPPGYVGYDEGGL---LTDAVNK 565
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
A+ + DE++K + ++++ +DH + + +I F+N I + SN+G I
Sbjct: 566 HPHAVLLLDEIEKAHPDVFNILLQVMDHGTLTDANGRKIDFRNVILIMTSNAGAENI 622
>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
Length = 872
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLE 235
++ +FDE++K + ++++ +D + + ++FQNTI + SN G +M LE
Sbjct: 676 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFQNTIIIMTSNIGSHYVME--LE 733
Query: 236 LRKSGERYI 244
RK ER +
Sbjct: 734 DRKDAERLV 742
>gi|325298216|ref|YP_004258133.1| ATPase AAA-2 domain-containing protein [Bacteroides salanitronis
DSM 18170]
gi|324317769|gb|ADY35660.1| ATPase AAA-2 domain protein [Bacteroides salanitronis DSM 18170]
Length = 826
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
+EE L++ V GQ+ A+ + A+ + + + L G GTGK + + +
Sbjct: 529 MEEYLRRRVVGQDRALKTLTDAILESRSGMNKPGQPIGSFFLLGPTGTGKTELAKALAET 588
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR--------LQLTNWIISNVTACDRAIF 182
+F +K RF F E+ +L + +++ + A+
Sbjct: 589 LFN--DEKSMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGMLVNKIRQQPYAVV 641
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSG 225
+FDE++K + D+ + +D +++++ F N+I LF SN G
Sbjct: 642 LFDEIEKAHPSVYDIFLQIMDEGKLHDRLGKEGDFSNSIILFTSNVG 688
>gi|163868097|ref|YP_001609301.1| Clp protease subunit [Bartonella tribocorum CIP 105476]
gi|161017748|emb|CAK01306.1| Clp protease subunit [Bartonella tribocorum CIP 105476]
Length = 783
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISVLVSSIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
L ++++ +D+ + + +I F+N I + +N+G +++ + F ++ + GE
Sbjct: 574 AHPELFNILLQVMDYGRLTDHNGKKIDFRNIILILTTNAGASDMAKSAIGFGKVHRDGE 632
>gi|386827843|ref|ZP_10114950.1| ATP-dependent Clp protease ATP-binding subunit clpA [Beggiatoa alba
B18LD]
gi|386428727|gb|EIJ42555.1| ATP-dependent Clp protease ATP-binding subunit clpA [Beggiatoa alba
B18LD]
Length = 764
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE LK V GQ+ AIS + A+K H K + + L G G GK VT +
Sbjct: 455 LERDLKMVVFGQDEAISTLSAAIKMSRSGLGHQEKPIGSYLLAGPTGVGKTEVTRQLARI 514
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + + A+ + DE++K
Sbjct: 515 LGIELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEAINKHPHAVLLLDEIEK 571
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
+ ++++ +DH A+ + + F+N + + +N+G ++
Sbjct: 572 AHPDVFNLLLQVMDHGALTDTNGRKTDFRNVMIIMTTNAGAEQV 615
>gi|3063758|emb|CAA73776.1| heat shock protein [Campylobacter jejuni]
Length = 857
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGKLLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|145526785|ref|XP_001449198.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416775|emb|CAK81801.1| unnamed protein product [Paramecium tetraurelia]
Length = 716
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 126
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 426 DIQFAKDVLDKEIEGLEKVKERIIEMISVNKLKNAGSKAKGFILLLNGPPGTGKTSIAKS 485
Query: 127 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 182
I S+ K TSRF+ + + P + H Y + I + + +F
Sbjct: 486 IAKSL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 537
Query: 183 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNS 224
I DE+DK K LL+++ P F DH+ + + F + IF+ SN
Sbjct: 538 ILDELDKVSKHHSGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSHVIFILTSND 593
>gi|365851807|ref|ZP_09392222.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
gi|363715748|gb|EHL99171.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
Length = 830
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE+ L Q V GQE AIS + +++ + + + L G G GK + + +
Sbjct: 514 LEKVLHQRVVGQEEAISAVSRSIRRARSGLKDPNRPIGSFMLLGPTGVGKTELAKAVAEA 573
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
+F D S ++ K++ SR+ +V QLT V ++ +FD
Sbjct: 574 VFGSEDDMIRVDMSEYMEKYSTSRLIGSAPGYVGYDEGGQLT----EKVRQKPYSVVLFD 629
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
EV+K + ++++ +D + + +I F+NT+ + SN G T +
Sbjct: 630 EVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNLGATTL 677
>gi|424848399|ref|ZP_18272885.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni D2600]
gi|356488186|gb|EHI18119.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni D2600]
Length = 857
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALSRAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|340504783|gb|EGR31198.1| hypothetical protein IMG5_116250 [Ichthyophthirius multifiliis]
Length = 546
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 45/156 (28%)
Query: 96 NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVH---------- 145
N +N + +K + L G PGTGK + + ++ K SRF+
Sbjct: 5 NQIKNTHARSKGFILLLQGPPGTGKTSIAKAVAKALQKE------SRFISFAGISDPSFF 58
Query: 146 KFNSRIHFPNENHV---SLYRLQLTNWIISNVTACDRAIFIFDEVDKFPK---------G 193
K + R + ++ V L + Q N +FI DE+DK +
Sbjct: 59 KGHRRTYVDSQPGVFVKELIKAQTMN-----------PVFILDEIDKISRSGMGADPYYS 107
Query: 194 LLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNS 224
L++++ P F DH+ +I F N+IF+ +N+
Sbjct: 108 LMEILNPEENSNFTDHYMDI-KIDFSNSIFILTANN 142
>gi|146321826|ref|YP_001201537.1| ATPases with chaperone activity, ATP-binding protein [Streptococcus
suis 98HAH33]
gi|145692632|gb|ABP93137.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 98HAH33]
Length = 817
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 72 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L + V GQE AIS + A+ +N R + + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEI 569
Query: 131 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT------F 233
FDE++K + +V++ +D + + ++ F NT+ + SN G T + +
Sbjct: 624 FDELEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGA 683
Query: 234 LELRKSGE 241
L+L KS E
Sbjct: 684 LDLSKSQE 691
>gi|30249695|ref|NP_841765.1| ClpA, ATP dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
gi|30180732|emb|CAD85644.1| ClpA, ATP dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
Length = 756
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 33 IAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICG 92
+ AGIA P ++S N ++ L+ LK V GQ+ AI +
Sbjct: 428 VIAGIARIPPQNVSSDDRN----------------KLKTLDRDLKAIVFGQDAAIDALTS 471
Query: 93 ALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SR 150
A+K + K + L P G GK V + ++ S ++ + SR
Sbjct: 472 AIKMARSGLGNTCKPIGSFLFSGPTGVGKTEVARQLAYTLGIPLHRFDMSEYMERHAVSR 531
Query: 151 IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN- 209
+ +V + L + + A+ +FDE++K + +V++ +D+ + +
Sbjct: 532 LIGAPPGYVGFDQGGL---LTETIIKQPHAVLLFDEIEKAHPDIFNVMLQIMDYGTLTDN 588
Query: 210 ---QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGERYITI 246
+ F+N I + +N+G + T F E KSG+ + I
Sbjct: 589 SGRKADFRNVIIVMTTNAGADVLTRTSIGFTEHTKSGDEMVEI 631
>gi|399037071|ref|ZP_10733981.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF122]
gi|398065358|gb|EJL56996.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF122]
Length = 831
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE++L+ V+GQ+ AI + ++K R N + G G GK V + SS
Sbjct: 470 LEQELRSVVYGQDNAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 529
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 530 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 586
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT---FLELRKSGE 241
+ ++++ +DH + + +I F+N I + +N+G +E+ F +++GE
Sbjct: 587 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEMAKAAIGFGSSKRTGE 645
>gi|384173167|ref|YP_005554544.1| ATP-dependent Clp protease ATP-binding subunit [Arcobacter sp. L]
gi|345472777|dbj|BAK74227.1| ATP-dependent Clp protease ATP-binding subunit [Arcobacter sp. L]
Length = 742
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
++ LE+ +++ V GQ+ AI+ I ++K + + K + L P G GK V +
Sbjct: 448 LKSLEKNMQKRVFGQDKAITTIVQSIKRNKAGLGLDKKPIGSFLFSGPTGVGKTEVAKEL 507
Query: 128 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
+ + F+R+ D H + I P +V + L + + + +
Sbjct: 508 STQLGIHFERF-DMSEYMEAHTVSRLIGAP-AGYVGFEQGGL---LTEAIRKHPHTVLLL 562
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 228
DE++K L+ +++ +D+ + N+ FQN + + SN G TE
Sbjct: 563 DEIEKAHPDLMSILLQVMDNAELTDNSGNKADFQNVVLIMTSNLGATE 610
>gi|300813508|ref|ZP_07093849.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512380|gb|EFK39539.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 449
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 123
++ ++ L+E LK+ V GQ+ AI + A+K + N + G G GK ++
Sbjct: 193 ETERLKTLDEDLKKKVKGQDQAIDVLARAVKRARIGLKTPNKPIGSFIFVGPTGVGKTFL 252
Query: 124 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 178
T + +F ++ S ++ K+ SR+ +V QLT V
Sbjct: 253 TKTLAEELFGSPENMIRIDMSEYMEKYTVSRLVGSPPGYVGYDEGGQLTEA----VRTKP 308
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIM 230
++ +FDE++K + ++++ +D A ++F++T+ + SN G ++
Sbjct: 309 YSVILFDEIEKAHPDVFNILLQILDEGRLTDAQGRTVNFKDTVIVMTSNVGANSLV 364
>gi|389695647|ref|ZP_10183289.1| ATP-dependent Clp protease ATP-binding subunit clpA [Microvirga sp.
WSM3557]
gi|388584453|gb|EIM24748.1| ATP-dependent Clp protease ATP-binding subunit clpA [Microvirga sp.
WSM3557]
Length = 821
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
L++ LK+ V+GQ+ AI + A+K K + L P G GK V + +S
Sbjct: 466 LQDTLKRVVYGQDKAIEALSSAIKLARAGLRDAEKPIGSYLFAGPTGVGKTEVAKQLAAS 525
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTTNAGAADM 626
>gi|160895376|ref|ZP_02076146.1| hypothetical protein CLOL250_02934 [Clostridium sp. L2-50]
gi|156862947|gb|EDO56378.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. L2-50]
Length = 817
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 65 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 123
+S + LEE+L + V GQ A+ + A+K + + L G G GK +
Sbjct: 499 ESKRLERLEEELHKRVVGQNEAVDAVAKAIKRSRVGLKDPKRPVGSFLFLGPTGVGKTEL 558
Query: 124 TDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 171
+ + ++F Y +K S+ + + F QL+ +
Sbjct: 559 SKALAEAVFGSEDALIRVDMSEYMEKHSVSKLIGSPPGYVGFEEGG-------QLSEKVR 611
Query: 172 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 227
SN ++ +FDE++K + ++++ +D + + ++ F+NTI + SN+G
Sbjct: 612 SN----PYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNTGAQ 667
Query: 228 EIMN 231
I++
Sbjct: 668 RIID 671
>gi|388455547|ref|ZP_10137842.1| hypothetical protein FdumT_03178 [Fluoribacter dumoffii Tex-KL]
Length = 1132
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 75 QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 134
++K H+ GQ +A SH N N +++ G PG GK Y +++ + K+
Sbjct: 718 RIKGHMSGQAIAPSHDPNQRLNEIIEAVTNLNNSYLTIQGPPGAGKTYTGKHLIAELIKK 777
Query: 135 YKDKGTSRFVHK 146
K G S HK
Sbjct: 778 GKKIGISSNSHK 789
>gi|219113211|ref|XP_002186189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583039|gb|ACI65659.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 997
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMN 231
A+ +FDE++K + +V++ +D + N ++F+NTI +F SN G EI++
Sbjct: 785 AVLLFDEMEKAHPDVFNVMLQLLDDGRLTDSKGNTVNFRNTICIFTSNVGSQEILD 840
>gi|39936210|ref|NP_948486.1| endopeptidase Clp ATP-binding subunit A [Rhodopseudomonas palustris
CGA009]
gi|192291926|ref|YP_001992531.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Rhodopseudomonas palustris TIE-1]
gi|39650065|emb|CAE28588.1| endopeptidase Clp: ATP-binding chain A [Rhodopseudomonas palustris
CGA009]
gi|192285675|gb|ACF02056.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Rhodopseudomonas palustris TIE-1]
Length = 794
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LEQTLKRVVFGQDKAIEALSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAST 519
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
L +V++ +DH + + Q++F+N I + +N+G ++
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADL 620
>gi|254420804|ref|ZP_05034528.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
sp. BAL3]
gi|196186981|gb|EDX81957.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
sp. BAL3]
Length = 767
Score = 37.7 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 124
+ ++R LE LK+ V GQE AI + A+K K + L P G GK V
Sbjct: 453 TESLRELEVDLKRAVFGQEQAIEQVSAAMKLARAGLRDPNKPIGSFLFSGPTGVGKTEVA 512
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ S++ + S ++ + SR+ +V + L + V ++ +
Sbjct: 513 KQLASTLGIEMQRFDMSEYMERHTVSRLIGAPPGYVGHDQGGL---LTDAVDQHPHSVVL 569
Query: 184 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 228
DE++K + ++++ +D+ AV ++ F+N I + +N+G +
Sbjct: 570 LDEIEKAHPDVYNILLQVMDNGMLTDAVGKKVDFRNVILIMTTNAGAAD 618
>gi|398831773|ref|ZP_10589949.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Phyllobacterium sp. YR531]
gi|398211475|gb|EJM98093.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Phyllobacterium sp. YR531]
Length = 822
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + +S
Sbjct: 464 LEAELKRVVYGQDLAIEALSSSIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 523
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 223
L ++++ +DH + + QI F+N I + +N
Sbjct: 581 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTN 618
>gi|332665301|ref|YP_004448089.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332334115|gb|AEE51216.1| ATPase AAA-2 domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 898
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 61 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPG 117
DK QS ++L E+++ Q + GQ+ A+ + A++ + + + G G
Sbjct: 548 DKMTQSEKDKLLSLEKEIGQRLIGQDEAVKAVSDAIRRSRAGLQDADRPIGSFIFLGPTG 607
Query: 118 TGKNYVTDFIVSSIF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQ 165
GK + I +F Y++K T SR V + + Q
Sbjct: 608 VGKTELAKTIAEVLFDDEKAMTRIDMSEYQEKHTVSRLVGAPPGYVGYDEGG-------Q 660
Query: 166 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFL 221
LT V +I + DE++K ++++ +D + + +F+NTI +
Sbjct: 661 LT----EAVRRRPYSIILLDEIEKAHPDTFNILLQVLDDGRLTDNKGRVANFKNTIIIMT 716
Query: 222 SNSGGTEIMNTFLELRKSGERYIT 245
SN G IM F +L + GE++ T
Sbjct: 717 SNMGSDLIMENFDDLEEMGEKHRT 740
>gi|119945376|ref|YP_943056.1| recombination factor protein RarA [Psychromonas ingrahamii 37]
gi|119863980|gb|ABM03457.1| Recombination protein MgsA [Psychromonas ingrahamii 37]
Length = 442
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 28/122 (22%)
Query: 88 SHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRF---- 143
+HI GA K +N N A ++ L G PGTGK + + I S Y D R
Sbjct: 30 AHIIGAGK-PLRNALENGAAHSMILWGPPGTGKTTLAELIAS-----YCDAHVERLSAVT 83
Query: 144 --VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPF 201
+ + + I +N TN I R + DEV +F K D +P+
Sbjct: 84 SGIKEIRAAIEIAQQNR--------TNGI--------RTLLFVDEVHRFNKAQQDAFLPY 127
Query: 202 ID 203
I+
Sbjct: 128 IE 129
>gi|301312189|ref|ZP_07218108.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
gi|300829864|gb|EFK60515.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
Length = 827
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
+EE L++ V GQ+ A+ + A+ + + + L G GTGK + + +
Sbjct: 530 MEEYLRRRVVGQDQALKTLTDAILESRSGMNKPGQPIGSFFLLGPTGTGKTELAKALAEA 589
Query: 131 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR--------LQLTNWIISNVTACDRAIF 182
+F +K RF F E+ +L + +++ + A+
Sbjct: 590 LFN--DEKSMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGMLVNKIRQQPYAVV 642
Query: 183 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSG 225
+FDE++K + D+ + +D +++++ F N+I LF SN G
Sbjct: 643 LFDEIEKAHPSVYDIFLQIMDEGKLHDRLGKEGDFSNSIVLFTSNVG 689
>gi|332557735|ref|ZP_08412057.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhodobacter
sphaeroides WS8N]
gi|332275447|gb|EGJ20762.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhodobacter
sphaeroides WS8N]
Length = 771
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE+ LK+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 458 LRDLEKTLKRVVFGQDRAIEALSSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQL 517
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S + S ++ K SR+ +V + + + V + + DE
Sbjct: 518 ASILGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGM---LTDGVDQHPHCVLLLDE 574
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K + ++++ +DH + + + F+N I + SN+G E+ + F R+
Sbjct: 575 IEKAHPDVYNILLQVMDHGKLTDHNGRSVDFRNVILIMTSNAGAAELAKSAIGFGRDRRE 634
Query: 240 GE 241
GE
Sbjct: 635 GE 636
>gi|221638713|ref|YP_002524975.1| ATP-dependent Clp protease ATP-binding protein ClpA [Rhodobacter
sphaeroides KD131]
gi|429208581|ref|ZP_19199828.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhodobacter
sp. AKP1]
gi|221159494|gb|ACM00474.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhodobacter
sphaeroides KD131]
gi|428188344|gb|EKX56909.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhodobacter
sp. AKP1]
Length = 771
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE+ LK+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 458 LRDLEKTLKRVVFGQDRAIEALSSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQL 517
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S + S ++ K SR+ +V + + + V + + DE
Sbjct: 518 ASILGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGM---LTDGVDQHPHCVLLLDE 574
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K + ++++ +DH + + + F+N I + SN+G E+ + F R+
Sbjct: 575 IEKAHPDVYNILLQVMDHGKLTDHNGRSVDFRNVILIMTSNAGAAELAKSAIGFGRDRRE 634
Query: 240 GE 241
GE
Sbjct: 635 GE 636
>gi|77462844|ref|YP_352348.1| chaperonin clpA/B [Rhodobacter sphaeroides 2.4.1]
gi|126461737|ref|YP_001042851.1| ATP-dependent Clp protease ATP-binding protein ClpA [Rhodobacter
sphaeroides ATCC 17029]
gi|77387262|gb|ABA78447.1| Chaperonin clpA/B [Rhodobacter sphaeroides 2.4.1]
gi|126103401|gb|ABN76079.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhodobacter
sphaeroides ATCC 17029]
Length = 771
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 69 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 127
+R LE+ LK+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 458 LRDLEKTLKRVVFGQDRAIEALSSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQL 517
Query: 128 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
S + S ++ K SR+ +V + + + V + + DE
Sbjct: 518 ASILGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGM---LTDGVDQHPHCVLLLDE 574
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRKS 239
++K + ++++ +DH + + + F+N I + SN+G E+ + F R+
Sbjct: 575 IEKAHPDVYNILLQVMDHGKLTDHNGRSVDFRNVILIMTSNAGAAELAKSAIGFGRDRRE 634
Query: 240 GE 241
GE
Sbjct: 635 GE 636
>gi|304311207|ref|YP_003810805.1| ATP-dependent clp protease, ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301796940|emb|CBL45153.1| ATP-dependent clp protease, ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 763
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 32 AIAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHIC 91
A+ A IA P ++S DK + +R LE L+ V GQ+ AI +
Sbjct: 440 AVVAKIARIPPKTVSSD------------DKEM----LRNLERDLRLAVFGQDEAIGVLS 483
Query: 92 GALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-S 149
A+K H K + L P G GK VT + ++ S ++ + S
Sbjct: 484 NAIKMSRAGLSHPDKPIGSFLFAGPTGVGKTEVTRQLAKTMGMELIRFDMSEYMERHTVS 543
Query: 150 RIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN 209
R+ +V + L I+ C + + DEV+K + ++++ +DH + +
Sbjct: 544 RLIGAPPGYVGFDQGGLLTEAITKSPHC---VLLLDEVEKAHPDVFNLLLQVMDHGTLTD 600
Query: 210 ----QISFQNTIFLFLSNSGGTEI 229
+ F+N I + +N+G +
Sbjct: 601 NNGRKADFRNVIIVMTTNAGAETV 624
>gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
upsaliensis RM3195]
gi|57015882|gb|EAL52671.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
upsaliensis RM3195]
Length = 857
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 62 KFIQSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K ++S + LE + LK+ V GQ+ A++ + A+K + ++K + L G G
Sbjct: 553 KMLKSEKQKFLEVEKHLKESVIGQDKALNALAKAIKRNKAGLNEDSKPIGSFLFLGPTGV 612
Query: 119 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 174
GK + +F K S F+ K + SR+ ++ + + V
Sbjct: 613 GKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAV 669
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 230
++ +FDE++K K + ++++ +D + + F+NTI + SN + IM
Sbjct: 670 RRKPYSVILFDEIEKAHKDVFNILLGILDDARATDSKGVSVDFKNTIIILTSNIASSAIM 729
Query: 231 N 231
N
Sbjct: 730 N 730
>gi|450062481|ref|ZP_21844366.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
gi|449205821|gb|EMC06551.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
Length = 813
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 130
LE +L + V GQ+ A+S I A++ N R + G G GK + +
Sbjct: 509 LERELHKRVIGQDDAVSSISRAIRRNQSGIRVGKRPIGSFMFLGPTGVGKTELAKALAEV 568
Query: 131 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 622
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
FDEV+K + D+++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFDILLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 672
>gi|408794281|ref|ZP_11205886.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408461516|gb|EKJ85246.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 755
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
L+ ++K V GQ+ AI + A+ K + L G G GK V +
Sbjct: 457 LDSEIKSIVFGQDHAIEQVVDAIHYSRSGLSDEGKPIGSFLFVGPTGVGKTEVAKTLAEK 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDEVD 188
+ + S ++ K + SR+ +V + QLT+ I N + +FDE++
Sbjct: 517 MGVEFLRFDMSEYMEKHSVSRLIGSPPGYVGYDQGGQLTDAITKN----PHCVLLFDEIE 572
Query: 189 KFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 228
K + + ++++ +DH + + + F+N I + +N+G E
Sbjct: 573 KAHEDIYNILLQVMDHATLTDSTGKKADFRNVILILTTNTGAQE 616
>gi|407009871|gb|EKE24919.1| hypothetical protein ACD_5C00356G0006 [uncultured bacterium]
Length = 824
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
LEE L + V GQE A+ + AL+ + K + L G G GK + +
Sbjct: 538 LEEHLHKLVIGQEEAVRQVSEALRRARSGIGNANKPVGSFLFLGPTGVGKTETAKALAKT 597
Query: 131 IFKRYKDKGTSRF-VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
F DK R + +F S + + L +L + + + + + DE++K
Sbjct: 598 YFG--DDKHLVRLDMSEFKSPSSI--DRLLGLSQLGEQGRLTTMIKDNPYCLLLLDEIEK 653
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSGE 241
+LD+ + +D V + +I+F+NT+ + SN+G + ++ +E + GE
Sbjct: 654 ANPEILDIFLQILDEGYVTDAFGEKINFRNTLIIATSNAGAS-LIKRMVENKSKGE 708
>gi|451941663|ref|YP_007462300.1| endopeptidase Clp ATP-binding chain a [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901050|gb|AGF75512.1| endopeptidase Clp ATP-binding chain a [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 781
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 130
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LEGELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 131 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 189
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 190 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
L ++++ +D+ + + +I F N I + +N+G +E+ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFCNIILIMTTNAGASELAKS 620
>gi|390354394|ref|XP_001181741.2| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 172
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 190 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
P GLLD + F+DHH + + ++ I +F SN I LE ++G
Sbjct: 1 MPPGLLDSMRSFLDHHTKVDGVDYRKVIVIFRSNLAAQAIKKHMLESYENG 51
>gi|419661051|ref|ZP_14191390.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-979]
gi|380633267|gb|EIB51249.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-979]
Length = 578
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.141 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,902,265,651
Number of Sequences: 23463169
Number of extensions: 160960916
Number of successful extensions: 510286
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 1293
Number of HSP's that attempted gapping in prelim test: 507840
Number of HSP's gapped (non-prelim): 1766
length of query: 247
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 108
effective length of database: 9,097,814,876
effective search space: 982564006608
effective search space used: 982564006608
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)