BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1694
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ERA9|TOR1A_CRICR Torsin-1A (Fragment) OS=Cricetus cricetus GN=TOR1A PE=2 SV=1
Length = 273
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 1 AECCGQK--RSLSREALQKDLDDKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGW 57
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+
Sbjct: 58 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVS 114
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 115 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 174
Query: 236 LRKSGER 242
KSG++
Sbjct: 175 FWKSGKQ 181
>sp|Q9ER41|TOR1B_MOUSE Torsin-1B OS=Mus musculus GN=Tor1b PE=2 SV=2
Length = 336
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 18/227 (7%)
Query: 21 ITGEFFTLS-GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQL 76
+ G F +S GIAI A A Y S + +F E C ++ + N L+ L
Sbjct: 21 VAGAFEPVSVGIAIGAVSALTGYLSYTDFYCRFT------ECCHEE--RPLNTSALKLDL 72
Query: 77 KQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYK 136
++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ + +++
Sbjct: 73 EEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIVAENLYP--- 128
Query: 137 DKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 195
KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE+DK G++
Sbjct: 129 -KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGII 187
Query: 196 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGER 242
D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++G +
Sbjct: 188 DAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRK 234
>sp|O14657|TOR1B_HUMAN Torsin-1B OS=Homo sapiens GN=TOR1B PE=1 SV=2
Length = 336
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 30 GIAIAAGIA---YFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELA 86
G+AI A A Y S + I +F E C ++ + N L+ L++ + GQ LA
Sbjct: 31 GLAIGAASAITGYLSYNDIYCRF------AECCREE--RPLNASALKLDLEEKLFGQHLA 82
Query: 87 ISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRFVH 145
I AL F+N + K L +SLHG GTGKN+V+ + ++ KG S FVH
Sbjct: 83 TEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP----KGLKSNFVH 137
Query: 146 KFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 205
F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G++D I PF+D++
Sbjct: 138 LFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDYY 197
Query: 206 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSGERYITIH 247
+ +S++ IF+FLSN+GG I T L+ ++G + I
Sbjct: 198 EQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQ 239
>sp|Q9ER39|TOR1A_MOUSE Torsin-1A OS=Mus musculus GN=Tor1a PE=1 SV=1
Length = 333
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C ++S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 AECCGQ--MRSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGW 104
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+
Sbjct: 105 TGTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVS 161
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 162 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALD 221
Query: 236 LRKSGER 242
KSG++
Sbjct: 222 FWKSGKQ 228
>sp|O14656|TOR1A_HUMAN Torsin-1A OS=Homo sapiens GN=TOR1A PE=1 SV=1
Length = 332
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A PE=2 SV=1
Length = 332
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 47 AECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGW 103
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+
Sbjct: 104 TGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALD 220
Query: 236 LRKSGER 242
+SG++
Sbjct: 221 FWRSGKQ 227
>sp|A4FUH1|TOR2A_BOVIN Torsin-2A OS=Bos taurus GN=TOR2A PE=2 SV=1
Length = 321
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 12/207 (5%)
Query: 33 IAAGIAYFSPSIINSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICG 92
++A A + S + F G C F + + LE L QH+ GQ LA S +
Sbjct: 21 VSAAAASWDLSSLRCNF------GSFCECDF--QPDFQGLECDLAQHLAGQHLARSLVVK 72
Query: 93 ALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
ALK Q+ TK L +SLHG GTGK+YV+ + +F+ D S VH F+ IH
Sbjct: 73 ALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYLFR---DGLRSPHVHHFSPVIH 128
Query: 153 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 212
FP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK GL++V+ PF+ V +
Sbjct: 129 FPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLAPGLIEVLRPFLGSSWVVYGTN 188
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELRKS 239
++ IF+F+SN+GG +I LE +S
Sbjct: 189 YRKAIFIFISNTGGEQINQVVLEAWRS 215
>sp|Q8R1J9|TOR2A_MOUSE Torsin-2A OS=Mus musculus GN=Tor2a PE=2 SV=1
Length = 321
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>sp|Q5JU69|TOR2A_HUMAN Torsin-2A OS=Homo sapiens GN=TOR2A PE=2 SV=1
Length = 321
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRS 215
>sp|Q6AYR4|TOR2A_RAT Torsin-2A OS=Rattus norvegicus GN=Tor2a PE=2 SV=1
Length = 321
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>sp|O77277|TORS_DROME Torsin-like protein OS=Drosophila melanogaster GN=torp4a PE=2 SV=2
Length = 340
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG
Sbjct: 51 AECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQ 109
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
PGTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + +
Sbjct: 110 PGTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLR 166
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 SCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGS 226
Query: 236 LRKSGE 241
+ K+G
Sbjct: 227 VMKNGR 232
>sp|Q68F68|TOR2A_XENLA Torsin-2A OS=Xenopus laevis GN=tor2a PE=2 SV=1
Length = 314
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 68 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 127
++ L+ L ++V GQ LA + ++K ++ + +K L +SLHG GTGK +V+ +
Sbjct: 41 DIEALDCDLARNVFGQHLAQELLFKSVKEFIESD-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 128 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 187
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+TAC R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTACGRSLFVFEEM 156
Query: 188 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL-RKSGER 242
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ R+ +R
Sbjct: 157 DKMHPGLIDAIVPFLGTSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWRQRKDR 212
>sp|P0C7W1|TOR2X_BOVIN Prosalusin OS=Bos taurus GN=TOR2A PE=3 SV=1
Length = 242
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>sp|Q95NU5|TORS_CAEEL Torsin-like protein OS=Caenorhabditis elegans GN=ooc-5 PE=1 SV=1
Length = 356
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 126/240 (52%), Gaps = 12/240 (5%)
Query: 2 HISLLYQHLIIYSIICISGITGEFF-TLSGIAIAAGIAYFSPSIINSKFLNGFGGGEACT 60
++ LL HL + IS ITG+ + + IAI+AG + + E C
Sbjct: 5 YVLLLLFHLCFVNTELISVITGKIKDSGTTIAISAGAFWGLKDRLKCYLY------ECCH 58
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
+ + + N L+ + + GQ L + ++K+H+ N + K L +S HG G+GK
Sbjct: 59 EPDV-NFNYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGK 116
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 180
NYV + I ++ F+ S FV + FP++N + Y+++L N I++ V C R+
Sbjct: 117 NYVAEIIANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRS 173
Query: 181 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
IFIFDE DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI E +SG
Sbjct: 174 IFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEIARITKEQYESG 233
>sp|Q8N2E6|TOR2X_HUMAN Prosalusin OS=Homo sapiens GN=TOR2A PE=1 SV=1
Length = 242
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 132 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 191
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 192 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>sp|P0C7W3|TOR2X_MOUSE Prosalusin OS=Mus musculus GN=Tor2a PE=2 SV=1
Length = 231
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F ++ LE L QH+ GQ LA + + +LK Q+ +K L +SLHG
Sbjct: 38 GSFCECDFW--PDLPGLECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGW 94
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ + +F+ D S VH F+ IHFP+ + Y+ +L +W+ N+T
Sbjct: 95 TGTGKSYVSSLLAQHLFR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLT 151
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
AC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+
Sbjct: 152 ACGRSLFLFDEMDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFI 197
>sp|P0C7W2|TOR2X_RAT Prosalusin OS=Rattus norvegicus GN=Tor2a PE=2 SV=1
Length = 231
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 56 GEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 115
G C F ++ LE L +H+ GQ LA + + +LK Q+ +K L +SLHG
Sbjct: 38 GSFCECDFW--PDLPGLECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGW 94
Query: 116 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 175
GTGK+YV+ + +F+ S VH F+ IHFP+ +H Y+ +L +W+ N+T
Sbjct: 95 TGTGKSYVSSLLAQYLFR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLT 151
Query: 176 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 221
AC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+
Sbjct: 152 ACGRSLFLFDEMDKLPPGLMEVLKPFLGPSWVVYGTNYRKAIFIFI 197
>sp|Q9H497|TOR3A_HUMAN Torsin-3A OS=Homo sapiens GN=TOR3A PE=1 SV=1
Length = 397
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 186 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K+G
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAG 291
>sp|Q9ER38|TOR3A_MOUSE Torsin-3A OS=Mus musculus GN=Tor3a PE=1 SV=2
Length = 385
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 48 KFLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 107
+F + GG C S+N+ LE L+ +HGQ LA + A+K + + KA
Sbjct: 94 RFQDCCSGGGDCR----ISNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKA 148
Query: 108 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 167
LA+S HG GTGKN++ ++ ++ Y+D S V F S HFP+ +V Y+ +L
Sbjct: 149 LALSFHGWSGTGKNFLARILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQ 205
Query: 168 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGG 226
+ C ++ F+FDE +K GLL+++ P+++ + + + IFLFLSN GG
Sbjct: 206 RQMQETQWRCHQSTFVFDEAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGG 265
Query: 227 TEIMNTFLELRKSG 240
+ I L L K+G
Sbjct: 266 SVINEVVLSLLKAG 279
>sp|Q5M936|TOR3A_RAT Torsin-3A OS=Rattus norvegicus GN=Tor3a PE=2 SV=1
Length = 395
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 125
S+N LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 118 SNNFTGLESDLRVRLHGQHLASKLVLEAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 176
Query: 126 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 185
+V ++ Y+D S V F S HFP+ +V LY+ L + C ++ F+FD
Sbjct: 177 MLVDNL---YRDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFD 233
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGGTEIMNTFLELRKSG 240
E +K GLL+++ P+++ + IFL LSN GG+ I L L K+G
Sbjct: 234 EAEKLHPGLLELLEPYLEPRSPETHGAELPRAIFLLLSNLGGSVINEVVLGLLKAG 289
>sp|Q0IHC5|TO4AA_XENLA Torsin-4A-A OS=Xenopus laevis GN=tor4a-a PE=2 SV=1
Length = 420
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ+ AI + L+++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQKRAIEKLMDHLQDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++ + K ++ + FV ++ + + PNEN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSIMDNDFVLQYYTMHNCPNENDVTQCQSEMSGLISEMISRAEIE 264
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+FIFDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDEVEVMPVALLDVLHRYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>sp|Q5BKJ7|TOR4A_XENTR Torsin-4A OS=Xenopus tropicalis GN=tor4a PE=2 SV=1
Length = 420
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQRRAIDKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 178
++ + K ++ + FV ++ + + P+EN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSVMDNDFVLQYYTMHNCPDENDVAKCQAEVSGMISEMISRAEIE 264
Query: 179 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+FIFDE++ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDELEVMPVALLDVLHGYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>sp|Q9NXH8|TOR4A_HUMAN Torsin-4A OS=Homo sapiens GN=TOR4A PE=1 SV=2
Length = 423
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 235
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>sp|Q8BH02|TOR4A_MOUSE Torsin-4A OS=Mus musculus GN=Tor4a PE=2 SV=1
Length = 426
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 180 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 232
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 233 FLE 235
L+
Sbjct: 306 VLQ 308
>sp|Q3KQ18|TO4AB_XENLA Torsin-4A-B OS=Xenopus laevis GN=tor4a-b PE=2 SV=1
Length = 418
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 61 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 120
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 148 DDNLQKYDLDGLEKTLQREVFGQTRAIEKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 206
Query: 121 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 179
++ + K ++ + FV ++ + + PNE+ V + +++ I ++ +
Sbjct: 207 SHTGRLLA----KHFRSVVDNDFVLQYYTNHNCPNESDVIQCQAEVSAMISQMISRAEIE 262
Query: 180 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 235
+F+FDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 263 EKIPVFLFDEVEAMPVALLDVLHSYFQ----LNQSNEYLNVVYILISNIGGHEITKFVLQ 318
>sp|Q568B8|TOR4A_DANRE Torsin-4A OS=Danio rerio GN=tor4a PE=2 SV=1
Length = 409
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 49 FLNGFGGGEACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL 108
FL + E D ++ ++ LE+ LK+ V GQ+ + G L+++ HN K L
Sbjct: 129 FLQVYNAIENLDDHVLKY-DLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPL 186
Query: 109 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN 168
+S HG G GK++V + + ++ V ++ H P ++ + + L +
Sbjct: 187 VLSFHGPTGVGKSHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLES 242
Query: 169 WIISNVTACDR----AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 224
I V+ + +FIFDEV+ P+ L+D + I N + N I++ +SN
Sbjct: 243 HISEMVSQGEEEEKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNL 299
Query: 225 GGTEI 229
G +I
Sbjct: 300 GHEDI 304
>sp|Q60649|CLPB_MOUSE Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb
PE=1 SV=1
Length = 677
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>sp|Q9H078|CLPB_HUMAN Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB
PE=1 SV=1
Length = 707
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 398
Query: 132 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 184
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 399 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 453
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 239
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 454 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 512
>sp|Q5E9N5|CLPB_BOVIN Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2
SV=1
Length = 677
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>sp|Q9WTT2|CLPB_RAT Caseinolytic peptidase B protein homolog OS=Rattus norvegicus
GN=Clpb PE=2 SV=1
Length = 677
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 131
LE++L+QH+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 132 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 176
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 177 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 232
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 233 FLELRKSG 240
L+LR+
Sbjct: 476 ALQLRQEA 483
>sp|Q7V8B1|CLPB_PROMM Chaperone protein ClpB OS=Prochlorococcus marinus (strain MIT 9313)
GN=clpB PE=3 SV=1
Length = 865
Score = 39.7 bits (91), Expect = 0.018, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K +QS ++L E +L Q V GQE A+ + A++ + +A L G G
Sbjct: 556 KLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGV 615
Query: 119 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 174
GK ++ + S +F S ++ K + SR+ +V + + V
Sbjct: 616 GKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGY---EAGGQLTEAV 672
Query: 175 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
A+ +FDEV+K + + +V++ +D V + + F NT+ + SN G I+
Sbjct: 673 RRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSIL 732
Query: 231 N 231
+
Sbjct: 733 D 733
>sp|Q9PI02|CLPB_CAMJE Chaperone protein ClpB OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=clpB PE=3 SV=1
Length = 857
Score = 37.7 bits (86), Expect = 0.081, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 186
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 187 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
V+K K + +V++ +D + + F+NTI + SN IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMN 730
>sp|Q7VBL0|CLPB_PROMA Chaperone protein ClpB OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=clpB PE=3 SV=1
Length = 864
Score = 35.0 bits (79), Expect = 0.44, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 130
LE++L V GQ+ A+ + +++ ++ + + L G G GK ++ +
Sbjct: 569 LEDKLNSKVIGQKQAVQAVADSIQRSRTGLSDPSRPMGSFLLLGPTGVGKTELSKSLAKE 628
Query: 131 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 185
+F K S ++ K + SR+ +V QL+ + N ++ +FD
Sbjct: 629 LFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRN----PYSVILFD 684
Query: 186 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 230
EV+K +L++++ +D + + I+F+NTI + SN G I+
Sbjct: 685 EVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESII 733
>sp|Q54316|HLYB_TREHY Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1
Length = 828
Score = 35.0 bits (79), Expect = 0.47, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 62 KFIQSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGT 118
+ + S + R+ +EE+L Q V GQ+ AIS I A++ + + L + G G
Sbjct: 499 RLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGV 558
Query: 119 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SR-IHFPNENHVSLYRLQLTNWIISN 173
GK + + +F S F+ KF SR I P LT
Sbjct: 559 GKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLT----EK 614
Query: 174 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
V ++ +FDE++K + ++++ ++ + + ++ F NTI + SN G +I
Sbjct: 615 VRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDI 674
Query: 230 M 230
+
Sbjct: 675 V 675
>sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2
SV=2
Length = 1024
Score = 34.7 bits (78), Expect = 0.63, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 47 SKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQ----HVHGQELAISHICGALKNHFQNRY 102
S F F GG+ C D+ +S + E L+ H+ Q L H CG L + +
Sbjct: 658 SDFHEKFAGGDICVDRSSESVTCQTFELTLRSCLYPHIDKQYL---HCCGNLMQTLKRDF 714
Query: 103 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
+ L + G + + DF +SIF + ++K T + V N ++
Sbjct: 715 RLVEYLQAMRNFFLMEGGDTMYDF-YTSIFDKIREKETWQNVSFLNVQLQ 763
>sp|A8Y3E2|LONP2_CAEBR Lon protease homolog 2, peroxisomal OS=Caenorhabditis briggsae
GN=CBG23035 PE=3 SV=2
Length = 773
Score = 34.7 bits (78), Expect = 0.63, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 103 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 162
++ K + + G PG GK + I S+ ++++ + + R H Y
Sbjct: 325 NSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIR------GHRRTY 378
Query: 163 RLQLTNWIISNVTAC--DRAIFIFDEVDKFPKG--------LLDVIIP-----FIDHHAV 207
+ II + C + +F+ DEVDK G LL+++ P F DH
Sbjct: 379 VAAMPGRIIEALKHCKSNNPVFLLDEVDKLYSGNQGSPSAALLELLDPEQNSTFHDH--- 435
Query: 208 YNQISFQNTIFLFLSNSGGTEIMNTFLELR 237
Y I F + +F++ + E + L+ R
Sbjct: 436 YLNIPFDVSKIMFIATANDVERLEPALKDR 465
>sp|Q7U637|CLPB1_SYNPX Chaperone protein ClpB 1 OS=Synechococcus sp. (strain WH8102)
GN=clpB1 PE=3 SV=2
Length = 862
Score = 34.3 bits (77), Expect = 0.80, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 30/188 (15%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
+ +QS ++L E+ L Q V GQ A++ + A++ + +A L G G
Sbjct: 555 RLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGV 614
Query: 119 GKNYVTDFIVSSIF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQL 166
GK ++ + + +F Y +K T SR + + + QL
Sbjct: 615 GKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGG-------QL 667
Query: 167 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLS 222
T V A+ +FDEV+K + +V++ +D V + + F NT+ + S
Sbjct: 668 T----EAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTS 723
Query: 223 NSGGTEIM 230
N G I+
Sbjct: 724 NIGSQSIL 731
>sp|Q8EW28|CLPB_MYCPE Chaperone protein ClpB OS=Mycoplasma penetrans (strain HF-2)
GN=clpB PE=3 SV=1
Length = 705
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
Query: 76 LKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 134
LK+ V GQ+ A+ + LKN N + G G GK V + ++F
Sbjct: 420 LKKRVKGQDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLF-- 477
Query: 135 YKDKGTSRFVHKFNSRIHFPNENHVSLYRL----------QLTNWIISNVTACDRAIFIF 184
T + + + N + E H S+ RL + + + ++ +
Sbjct: 478 ----NTEKAIVRINMSEYM--EKH-SISRLIGAPPGYIGYEQAGELSEQIRRKPYSVVLL 530
Query: 185 DEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 230
DE++K +L+V++ +D + + I+F+NTI + SN G +M
Sbjct: 531 DEIEKAHPDILNVLLQVLDEGTLKDNQGRNINFKNTIIIMTSNVGALYLM 580
>sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana
GN=CLPB3 PE=1 SV=1
Length = 968
Score = 34.3 bits (77), Expect = 0.93, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 28/177 (15%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA-ISLHGLPGTGKNYVTDFIVSS 130
LEE+L + V GQ A++ + A++ + +A G G GK + + S
Sbjct: 642 LEEELHKRVVGQNPAVTAVAEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASY 701
Query: 131 IFK-----------RYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 178
+F Y +K SR + + + QLT V
Sbjct: 702 MFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGG-------QLT----ETVRRRP 750
Query: 179 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 231
++ +FDE++K + +V + +D V + +SF NT+ + SN G I+N
Sbjct: 751 YSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQFILN 807
>sp|P33416|HSP78_YEAST Heat shock protein 78, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HSP78 PE=1 SV=2
Length = 811
Score = 34.3 bits (77), Expect = 0.94, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 72 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 130
+E LK+ V GQ+ AI+ I A++ + +A + G GTGK +T +
Sbjct: 498 MENSLKERVVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTELTKALAEF 557
Query: 131 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+F + RF H + I P +S QLT V A+ +
Sbjct: 558 LFD--DESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 611
Query: 184 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMN 231
FDE +K + +++ +D ++ + + F+NTI + SN G ++N
Sbjct: 612 FDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLN 663
>sp|Q03F27|CLPX_PEDPA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pediococcus
pentosaceus (strain ATCC 25745 / 183-1w) GN=clpX PE=3
SV=1
Length = 418
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 76 LKQHVHGQELAISHICGALKNHFQ--NRYHNTKALA---------ISLHGLPGTGKNYVT 124
L Q+V GQE A + A+ NH++ N+ TKA ISL G G+GK ++
Sbjct: 72 LNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEPELQKSNISLIGPTGSGKTFLA 131
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNEN--HVSLYRLQLTNWIISNVTACDRAIF 182
+ + + + + + E+ ++ L LQ ++ NV A +R I
Sbjct: 132 QSLAKILNVPFAIADATTL-----TEAGYVGEDVENILLKLLQNADY---NVEAAERGII 183
Query: 183 IFDEVDKFPK 192
DE+DK K
Sbjct: 184 YIDEIDKIAK 193
>sp|Q7V2A3|CLPB_PROMP Chaperone protein ClpB OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=clpB PE=3 SV=1
Length = 860
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 229
++ + DE++K K +LDV++ +D + + ISF+N+I + SN G I
Sbjct: 675 SLILLDEIEKAHKDVLDVLLQVLDDGIITDGQGRTISFKNSIIVLTSNLGSQSI 728
>sp|Q8DJ40|CLPB1_THEEB Chaperone protein ClpB 1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=clpB1 PE=3 SV=1
Length = 871
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 118
K ++S ++L EE+L + V GQ+ A+S + A++ + +A + G G
Sbjct: 555 KLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGV 614
Query: 119 GKNYVTDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQL 166
GK + + + +F Y +K SR + + + QL
Sbjct: 615 GKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGG-------QL 667
Query: 167 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLS 222
T I A+ +FDE++K + +V + +D V + + F+NTI + S
Sbjct: 668 TEAIRRR----PYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFKNTIIIMTS 723
Query: 223 NSGGTEIMNTFLELRKSGERY 243
N G I++ + + E Y
Sbjct: 724 NIGSQYILDVAGDDSRYSEMY 744
>sp|P05444|CLPA_RHOBL ClpA homolog protein OS=Rhodopseudomonas blastica PE=3 SV=1
Length = 793
Score = 33.9 bits (76), Expect = 1.2, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 66 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 124
+ +R LE LK+ V GQ+ AI + ++K K + L P G GK V
Sbjct: 476 AETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREPEKPIGNYLFTGPTGVGKTEVA 535
Query: 125 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 183
+ +++ S ++ K SR+ +V + + + V + +
Sbjct: 536 KQLAATLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGM---LTDGVDQHPHCVLL 592
Query: 184 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLEL 236
DE++K + ++++ +DH + + + F+N I + SN G ++ F
Sbjct: 593 LDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGAADMAKEAIGFGRE 652
Query: 237 RKSGE 241
R++GE
Sbjct: 653 RRTGE 657
>sp|Q11QT1|LON_CYTH3 Lon protease OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=lon PE=3 SV=1
Length = 813
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 56 GEACTDKFIQSSNVRVLEE------QLKQHVHGQELAISHICGALKNHFQNRYHNTKALA 109
GE TD F +L+E ++KQ + + LA+ LKN N KA
Sbjct: 324 GENSTDNFDLVRAKEILDEDHFGLTKVKQRIL-EYLAVLK----LKN-------NMKAPI 371
Query: 110 ISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNE--NHVSLYRLQLT 167
+ L+G PG GK + I ++ ++Y + +H +E H Y +
Sbjct: 372 LCLYGPPGVGKTSLGKSIAKALDRKY--------IRMSLGGVHDESEIRGHRKTYIGAMP 423
Query: 168 NWIISNVTACDRA--IFIFDEVDKFPK--------GLLDVIIP-----FIDHHAVYNQIS 212
II + + + +FI DE+DK K LL+V+ P F+D+ + ++
Sbjct: 424 GKIIQGIKRSETSNPVFILDEIDKISKDFRGDPSSALLEVLDPEQNSSFMDN---FLEVE 480
Query: 213 FQNTIFLFLSNSGGTEIMNTFLELR 237
+ + LF++ S + + L R
Sbjct: 481 YDLSKVLFIATSNALDTIQPALRDR 505
>sp|Q95K09|GCP5_MACFA Gamma-tubulin complex component 5 (Fragment) OS=Macaca fascicularis
GN=TUBGCP5 PE=2 SV=2
Length = 725
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 46 NSKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQ----HVHGQELAISHICGALKNHFQNR 101
S F F GG+ C D+ +S + E L+ H+ Q L CG L +
Sbjct: 358 QSDFHEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYL---DCCGNLMQTLKKD 414
Query: 102 YHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
Y + L + G + + DF +SIF + ++K T + V N ++
Sbjct: 415 YRLVEYLQAMRNFFLMEGGDTMYDF-YTSIFDKIREKETWQNVSFLNVQLQ 464
>sp|Q75GT3|CLPB2_ORYSJ Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPB2 PE=2 SV=1
Length = 978
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 180 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 231
+I +FDE++K + +V + +D V + ++SF N+I + SN G I+N
Sbjct: 759 SIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMTSNVGSQFILN 814
>sp|Q9XW87|LONP2_CAEEL Lon protease homolog 2, peroxisomal OS=Caenorhabditis elegans
GN=Y75B8A.4 PE=3 SV=1
Length = 773
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 103 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 162
++ K + + G PG GK + I S+ ++++ + + R H Y
Sbjct: 325 NSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIR------GHRRTY 378
Query: 163 RLQLTNWIISNVTAC--DRAIFIFDEVDKFPKG--------LLDVIIP-----FIDHHAV 207
+ II + C + +F+ DEVDK G LL+++ P F DH
Sbjct: 379 VAAMPGRIIEALKTCKTNNPVFLLDEVDKLYSGNQGSPSAALLELLDPEQNSTFHDH--- 435
Query: 208 YNQISFQNTIFLFLSNSGGTEIMNTFLELR 237
Y I F + +F++ + + + L R
Sbjct: 436 YLNIPFDVSKIMFIATANDIDRLEPALRDR 465
>sp|Q89YY3|CLPB_BACTN Chaperone protein ClpB OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=clpB
PE=3 SV=1
Length = 862
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 62 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGT 118
K +QS ++L E++L Q V GQ+ AI + A++ + + + G G
Sbjct: 548 KMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGV 607
Query: 119 GKNYVTDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQL 166
GK + + +F Y++K SR V + + QL
Sbjct: 608 GKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGG-------QL 660
Query: 167 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLS 222
T I ++ +FDE++K + ++++ +D + + ++F+NTI + S
Sbjct: 661 TEAIRRK----PYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTS 716
Query: 223 NSGGTEIMNTFLELRKSGERYI 244
N G + I + +L S + +
Sbjct: 717 NMGSSYIQSQMEKLSGSNKEEV 738
>sp|Q96RT8|GCP5_HUMAN Gamma-tubulin complex component 5 OS=Homo sapiens GN=TUBGCP5 PE=1
SV=1
Length = 1024
Score = 33.1 bits (74), Expect = 1.8, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 47 SKFLNGFGGGEACTDKFIQSSNVRVLEEQLKQ----HVHGQELAISHICGALKNHFQNRY 102
S F F GG+ C D+ +S + E L+ H+ Q L CG L + Y
Sbjct: 658 SDFHEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYL---DCCGNLMQTLKKDY 714
Query: 103 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIH 152
+ L + G + + DF +SIF + ++K T + V N ++
Sbjct: 715 RLVEYLQAMRNFFLMEGGDTMYDF-YTSIFDKIREKETWQNVSFLNVQLQ 763
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,025,638
Number of Sequences: 539616
Number of extensions: 3849152
Number of successful extensions: 13297
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 13193
Number of HSP's gapped (non-prelim): 120
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)