RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16945
(395 letters)
>gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch
2). The histidine phosphatase superfamily is so named
because catalysis centres on a conserved His residue
that is transiently phosphorylated during the catalytic
cycle. Other conserved residues contribute to a
'phosphate pocket' and interact with the phospho group
of substrate before, during and after its transfer to
the His residue. Structure and sequence analyses show
that different families contribute different additional
residues to the 'phosphate pocket' and, more
surprisingly, differ in the position, in sequence and in
three dimensions, of a catalytically essential acidic
residue. The superfamily may be divided into two main
branches.The smaller branch 2 contains predominantly
eukaryotic proteins. The catalytic functions in members
include phytase, glucose-1-phosphatase and multiple
inositol polyphosphate phosphatase. The in vivo roles of
the mammalian acid phosphatases in branch 2 are not
fully understood, although activity against
lysophosphatidic acid and tyrosine-phosphorylated
proteins has been demonstrated.
Length = 327
Score = 219 bits (560), Expect = 1e-68
Identities = 101/321 (31%), Positives = 158/321 (49%), Gaps = 35/321 (10%)
Query: 9 LYRHGDRTP--------------INFYPNDPYKNASYWPVGPGQLTNVGKLQHYKLGQWF 54
+ RHGDRTP + ++ + N WP+G GQLT G+ Q ++LG++
Sbjct: 8 VSRHGDRTPTKSLPKDPEAWPFKLLSEKHNDFLNKVQWPLGWGQLTPRGRAQAFELGRYL 67
Query: 55 GERYRDLIGDSYSKENVYVMSTDVDRTLMSAEANLAGFFPPKGDQVWDPKIKWQPIPVHT 114
+RY L+ D Y VY+ S+D +RTL SA+A LAG FPP+GD + + + WQPIPV T
Sbjct: 68 RQRYVGLLPDGYPPSEVYIRSSDSNRTLASAQAFLAGLFPPEGD-IDNDLLDWQPIPVVT 126
Query: 115 MPEKLDKV----LSMKKPCPQYDVEKRKYMNSPEIQQVLAKYRPLF-QYVSQHAGEPV-E 168
+PE + L CP +D + PE+ ++LA Y + +SQ
Sbjct: 127 LPEVKKALANLLLLGYDSCPAFDESLVEKRVDPELAKLLAVYLEPIAKRLSQLLPGETNL 186
Query: 169 TITDLEFIHNTLFIEEIN--NLTLPEW---THPIYPEPLRTVAAFSFAIPARTPALKRLK 223
T D+ + + E N P+ ++ E L + + + + P L +L
Sbjct: 187 TGLDVWALLDLCLFETNASDNSPFPDLFTGYDALHLEYLSDLEEY-YGLSGIGPELAKLI 245
Query: 224 AGPLVEDIVKHMVAKSKDKLKKK--KIWIYSAHDTTVANLLNTLNIFD------LHCPPY 275
GPL+ +++K + + K+++Y AHDTT+A LL+ L +FD PPY
Sbjct: 246 GGPLLNELLKRLTNALVPDQTRLDLKLYLYFAHDTTIAPLLSALGLFDQLPGLSSGEPPY 305
Query: 276 TAAVMIELHQKDDEYYVNILY 296
A ++ EL Q E+YV +LY
Sbjct: 306 AARLVFELWQDGKEFYVRLLY 326
>gnl|CDD|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in
histidine acid phosphatases and phytases; contains a His
residue which is phosphorylated during the reaction.
Catalytic domain of HAP (histidine acid phosphatases)
and phytases (myo-inositol hexakisphosphate
phosphohydrolases). The conserved catalytic core of this
domain contains a His residue which is phosphorylated in
the reaction. Functions in this subgroup include roles
in metabolism, signaling, or regulation, for example
Escherichia coli glucose-1-phosphatase functions to
scavenge glucose from glucose-1-phosphate and the
signaling molecules inositol 1,3,4,5,6-pentakisphosphate
(InsP5) and inositol hexakisphosphate (InsP6) are in
vivo substrates for eukaryotic multiple inositol
polyphosphate phosphatase 1 (Minpp1). Phytases scavenge
phosphate from extracellular sources and are added to
animal feed while prostatic acid phosphatase (PAP) has
been used for many years as a serum marker for prostate
cancer. Recently PAP has been shown in mouse models to
suppress pain by functioning as an
ecto-5prime-nucleotidase. In vivo it dephosphorylates
extracellular adenosine monophosphate (AMP) generating
adenosine,and leading to the activation of A1-adenosine
receptors in dorsal spinal cord.
Length = 242
Score = 143 bits (363), Expect = 1e-40
Identities = 81/309 (26%), Positives = 122/309 (39%), Gaps = 96/309 (31%)
Query: 9 LYRHGDRTPINFYPNDPYKNASYWPVGPGQLTNVGKLQHYKLGQWFGERYRDLIGD-SYS 67
L RHGDR P G+LT G+ Q ++LG++F +RY +L+ SY+
Sbjct: 8 LSRHGDRYP-------------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYN 48
Query: 68 KENVYVMSTDVDRTLMSAEANLAGFFPPKGDQVWDPKIKWQPIPVHTMPEKLDKVLSMKK 127
+ ++Y+ S+D RTL SA+A LAG FPP G WQPI VHT+PE+ D V ++
Sbjct: 49 RSDLYIRSSDSQRTLQSAQAFLAGLFPPDG---------WQPIAVHTIPEEEDDVSNL-- 97
Query: 128 PCPQYDVEKRKYMNSPEIQQVLAKYRPLFQYVSQHAGEPVETITDLEFIHNTLFIEEINN 187
L Y E + +
Sbjct: 98 -------------------FDLCAY---------------------ETVAKGYSAPFCDL 117
Query: 188 LTLPEWTHPIYPEPLRTVAAFSFAIPARTPALKRLKAGPLVEDIVKHMVAKSKDKLKKK- 246
T EW Y L+ + P L R + PL+ +++ +
Sbjct: 118 FTEEEWVKLEYLNDLKFYYGYGPGNP-----LARAQGSPLLNELLARLTNGPSGSQTFPL 172
Query: 247 --KIWIYSAHDTTVANLLNTLNIFD---------------LHCPPYTAAVMIELHQ--KD 287
K+++Y +HDTT+ LL L +FD PP+ A ++ EL + D
Sbjct: 173 DRKLYLYFSHDTTILPLLTALGLFDFAEPLPPDFLRGFSESDYPPFAARLVFELWRCPGD 232
Query: 288 DEYYVNILY 296
E YV +L
Sbjct: 233 GESYVRVLV 241
>gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally
diverse set of proteins, mostly phosphatases; contains a
His residue which is phosphorylated during the reaction.
Catalytic domain of a functionally diverse set of
proteins, most of which are phosphatases. The conserved
catalytic core of this domain contains a His residue
which is phosphorylated in the reaction. This set of
proteins includes cofactor-dependent and
cofactor-independent phosphoglycerate mutases (dPGM, and
BPGM respectively), fructose-2,6-bisphosphatase
(F26BP)ase, Sts-1, SixA, histidine acid phosphatases,
phytases, and related proteins. Functions include roles
in metabolism, signaling, or regulation, for example
F26BPase affects glycolysis and gluconeogenesis through
controlling the concentration of F26BP; BPGM controls
the concentration of 2,3-BPG (the main allosteric
effector of hemoglobin in human blood cells); human
Sts-1 is a T-cell regulator; Escherichia coli Six A
participates in the ArcB-dependent His-to-Asp
phosphorelay signaling system; phytases scavenge
phosphate from extracellular sources. Deficiency and
mutation in many of the human members result in disease,
for example erythrocyte BPGM deficiency is a disease
associated with a decrease in the concentration of
2,3-BPG. Clinical applications include the use of
prostatic acid phosphatase (PAP) as a serum marker for
prostate cancer. Agricultural applications include the
addition of phytases to animal feed.
Length = 153
Score = 57.4 bits (139), Expect = 5e-10
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 31/110 (28%)
Query: 9 LYRHGDRTPINFYPNDPYKNASYWPVGPGQLTNVGKLQHYKLGQWFGERYRDLIGDSYSK 68
L RHG+R PN + + G G LT G+ Q +LG+ ERY
Sbjct: 4 LVRHGER-----EPNAEGR---FTGWGDGPLTEKGRQQARELGKALRERYIKFD------ 49
Query: 69 ENVYVMSTDVDRTLMSAEANLAGFFPPKGDQVWDPKIKWQPIPVHTMPEK 118
+ S+ + R + +AE L G F +PV P
Sbjct: 50 ---RIYSSPLKRAIQTAEIILEGLFE--------------GLPVEVDPRA 82
Score = 35.5 bits (82), Expect = 0.018
Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 14/90 (15%)
Query: 206 AAFSFAIPARTPALKRLKAGPLVEDIVKHMVAKSKDKLKKKKIWIYSAHDTTVANLLNTL 265
+P R+ + +++ L K + +H T+ LL L
Sbjct: 68 EGLFEGLPVEVDPRARVL--NALLELLAR-------HLLDGKNVLIVSHGGTIRALLAAL 118
Query: 266 NIFDLHC-----PPYTAAVMIELHQKDDEY 290
P + +++EL + +Y
Sbjct: 119 LGLSDEEILSLNLPNGSILVLELDECGGKY 148
>gnl|CDD|182283 PRK10172, PRK10172, phosphoanhydride phosphorylase; Provisional.
Length = 436
Score = 42.4 bits (100), Expect = 3e-04
Identities = 81/410 (19%), Positives = 131/410 (31%), Gaps = 96/410 (23%)
Query: 11 RHGDRTPINFYP--ND--PYKNASYWPVGPGQLTNVGKLQHYKLGQWFGERYRDL----I 62
RHG R P D P WPV G LT G LG + +R
Sbjct: 42 RHGVRAPTKATQLMQDVTPDA-WPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAA 100
Query: 63 GDSYSKENVYVMSTDVD-RTLMSAEANLAGFFPPKGDQVWDPKIKWQPIPVHTMPEKLDK 121
V + DVD RT + EA LAG P V +P P+ P K
Sbjct: 101 KGCPQPGQVAAI-ADVDQRTRKTGEAFLAGLAPDCAITVHTQADTSKPDPLFN-PLKTG- 157
Query: 122 VLSMKKPCPQYDVEKRKYMNSPEIQQVLAKYRPLFQYVSQ-------------HAGEPVE 168
V + + R + I +Y+ F+ + + +
Sbjct: 158 VCQLDNANVTDAILSRAGGS---IADFTQRYQTAFRELERVLNFAQSPLCLSREKQDKSC 214
Query: 169 TITDLEFIHNTLFIEEINNLTL------------------------PEWTHPIYPEPLRT 204
++T + + + L + +N++L P W T
Sbjct: 215 SLT--QALPSELKVSA-DNVSLSGAVSLASMLTEIFLLQQAQGMPEPAWGRITDSHQWNT 271
Query: 205 VAAF---SFAIPARTPALKRLKAGPLVEDIVKHMVAKSKDKLK-----KKKIWIYSAHDT 256
+ + F + RTP + R +A PL++ I+ + K + + HDT
Sbjct: 272 LLSLHNAQFYLLQRTPEVARHRATPLLDLIMTALTPHPPQKQAYGITLPTSVLFIAGHDT 331
Query: 257 TVANLLNTLNI-FDL-----HCPPYTAAVMIELHQKDDEYY---VNILY----------K 297
+ANL L + + L + PP V + D V+++Y
Sbjct: 332 NLANLGGALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVYQTLQQMRDKTP 391
Query: 298 NSTSVPPYQ--LSIPGC-----DFDCPLDDFVSLTQDVVLTDTQWEVACH 340
S + PP + L++ GC C L F + + + AC
Sbjct: 392 LSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIP------ACS 435
>gnl|CDD|213027 cd10970, CE4_DAC_u1_6s, Putative catalytic NodB homology domain of
uncharacterized prokaryotic polysaccharide deacetylases
which consist of a 6-stranded beta/alpha barrel. This
family contains uncharacterized prokaryotic
polysaccharide deacetylases. Although their biological
functions remain unknown, all members of the family
contain a conserved domain with a 6-stranded beta/alpha
barrel, which is similar to the catalytic NodB homology
domain of rhizobial NodB-like proteins, belonging to the
larger carbohydrate esterase 4 (CE4) superfamily.
Length = 194
Score = 33.1 bits (76), Expect = 0.14
Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 306 QLSIPGCDFDCP----LDDFVSLTQDVVLTDTQWEVACHAHHFLDLIPTSDED 354
+ IP P ++L Q L D WE+A H DL S ++
Sbjct: 24 EYGIPATAAVIPDSIGSSGRLTLDQLRELQDAGWEIASHTLTHTDLTELSADE 76
>gnl|CDD|182284 PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase;
Provisional.
Length = 413
Score = 32.4 bits (74), Expect = 0.42
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 29/132 (21%)
Query: 216 TPALKRLKAGPLVEDIVKHMVAKSKDKLKKKKIWIYSAHDTTVANLLNTLNIFDLHCP-- 273
+P + R A PLV+ I K +V D+ K+ + HD+ +A+LL L+
Sbjct: 276 SPEVARNVAKPLVKYIDKALVT---DRASAPKVTVLVGHDSNIASLLTALDFKPYQLHDQ 332
Query: 274 ----PYTAAVMIE-LH-QKDDEYYVNILY--------KNST----SVPPYQ--LSIPGCD 313
P ++ + H K + + I Y +N+ PP + L + GC
Sbjct: 333 YERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPPQRVTLELKGCP 392
Query: 314 FD----CPLDDF 321
D CP+D F
Sbjct: 393 IDANGFCPMDKF 404
Score = 29.7 bits (67), Expect = 3.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 32 WPVGPGQLTNVGKLQHYKLGQWFGERYRD--LI--GDSYSKENVYVMSTDVDRTLMSAEA 87
W V GQLT G + +G + E L+ G+ + VY + + RT+ +A+
Sbjct: 64 WDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQF 123
Query: 88 NLAGFFP 94
+ G FP
Sbjct: 124 FITGAFP 130
>gnl|CDD|225040 COG2129, COG2129, Predicted phosphoesterases, related to the Icc
protein [General function prediction only].
Length = 226
Score = 31.2 bits (71), Expect = 0.82
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 250 IYSAHDTTVANLLNTLNIFDLHCPPY 275
IYS + V N +NI H PPY
Sbjct: 124 IYSKLKSLVKKADNPVNILLTHAPPY 149
>gnl|CDD|216236 pfam01003, Flavi_capsid, Flavivirus capsid protein C. Flaviviruses
are small enveloped viruses with virions comprised of 3
proteins called C, M and E. Multiple copies of the C
protein form the nucleocapsid, which contains the ssRNA
molecule.
Length = 117
Score = 29.6 bits (67), Expect = 1.0
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 22/71 (30%)
Query: 201 PLRTVAA----FSFAIPARTPALKRL-KAGPLVEDIVKHMVAKSKDKLKKKKIWIYSAHD 255
PLR V A F F A TP LK+ + P + I KH+ K KK
Sbjct: 37 PLRLVLAFLAFFRFTAIAPTPGLKKRWRTVPKRQAI-KHL-----RKFKK---------- 80
Query: 256 TTVANLLNTLN 266
V LL+ LN
Sbjct: 81 -EVGTLLDGLN 90
>gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor
(ARF-GEF); Provisional.
Length = 1780
Score = 30.9 bits (70), Expect = 1.3
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 229 EDIVKHMVAKSKDKLKKKKIWIYSAHDTTVANLLNTLNIFDLHCPPYTAAVMIELHQKDD 288
+D++KHM + K+K +K + Y+A D + + ++ P AA + L Q DD
Sbjct: 842 DDLIKHMQEQFKEKARKSESVYYAATDVVILRFM-----VEVCWAPMLAAFSVPLDQSDD 896
Query: 289 E 289
E
Sbjct: 897 E 897
>gnl|CDD|234042 TIGR02870, spore_II_D, stage II sporulation protein D. Stage II
sporulation protein D (SpoIID) is a protein of the
endospore formation program in a number of lineages in
the Firmicutes (low-GC Gram-positive bacteria). It is
expressed in the mother cell compartment, under control
of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one
of three major proteins involved in engulfment of the
forespore by the mother cell [Cellular processes,
Sporulation and germination].
Length = 338
Score = 30.5 bits (69), Expect = 1.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 211 AIPARTPALKRLKA-----------GPLVEDIVKHMVAKSKDKLKKK 246
A+ ART A++R+ G + D +SK++LKKK
Sbjct: 99 AVAARTFAVRRMLQFGGTGCGDHPGGDVCTDTTHCQAYQSKEELKKK 145
>gnl|CDD|216808 pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like
proteins are widely distributed throughout prokaryotes
and are frequently associated with genes encoding
stomatin-like proteins (slipins). There appear to be
three major groups: an ancestral group with only an
N-terminal serine protease domain and this C-terminal
beta sheet-rich domain which is structurally very
similar to the OB-fold domain, associated with its
neighboring slipin cluster; a second major group with an
additional middle, membrane-spanning domain, associated
in some species with eoslipin and in others with yqfA; a
final 'artificial' group which unites truncated forms
lacking the protease region and associated with their
ancestral gene partner, either yqfA or eoslipin. This
NefD, C-terminal, domain appears to be the major one for
relating to the associated protein. NfeD homologues are
clearly reliant on their conserved gene neighbor which
is assumed to be necessary for function, either through
direct physical interaction or by functioning in the
same pathway, possibly involve with lipid-rafts.
Length = 144
Score = 29.2 bits (66), Expect = 2.1
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 344 FLDLIPTSDEDNSFATIVLLTMGVLLTLLLVSLVFYVHKQWRHP 387
L L PT + ++L + ++ LL+ + F V+++
Sbjct: 34 ALLLFPTGAPGYGISWGLILVLAIVSFALLLFVAFAVYRRLLTR 77
>gnl|CDD|177443 PHA02653, PHA02653, RNA helicase NPH-II; Provisional.
Length = 675
Score = 29.2 bits (66), Expect = 4.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 172 DLEFIHNTLFIEEINNLTLPE--WTHPIYPEPLRTVAAF--SFAIP 213
D EF+HN + + NLTLPE + P + LR + SF I
Sbjct: 523 DSEFLHNYILYAKYFNLTLPEDLFVIPSNLDRLRKTEEYIDSFNIS 568
>gnl|CDD|236778 PRK10859, PRK10859, membrane-bound lytic transglycosylase F;
Provisional.
Length = 482
Score = 28.7 bits (65), Expect = 5.7
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Query: 134 VEKRKYMNSPEIQQVLAKYRPLFQYVSQHAGE 165
V+ R ++ + I L KY+PLF+ ++AGE
Sbjct: 274 VDTRTFLRA--IDNRLPKYQPLFE---KYAGE 300
>gnl|CDD|176805 cd08971, AcNei2_N, N-terminal domain of the actinomycetal Nei2 and
related DNA glycosylases. This family contains the
N-terminal domain of the actinomycetal Nei2 and related
DNA glycosylases. It belongs to the FpgNei_N,
[N-terminal domain of Fpg (formamidopyrimidine-DNA
glycosylase, MutM)_Nei (endonuclease VIII)] domain
superfamily. DNA glycosylases maintain genome integrity
by recognizing base lesions created by ionizing
radiation, alkylating or oxidizing agents, and
endogenous reactive oxygen species. They initiate the
base-excision repair process, which is completed with
the help of enzymes such as phosphodiesterases, AP
endonucleases, DNA polymerases and DNA ligases. DNA
glycosylases cleave the N-glycosyl bond between the
sugar and the damaged base, creating an AP
(apurinic/apyrimidinic) site. Most FpgNei DNA
glycosylases use their N-terminal proline residue as the
key catalytic nucleophile, and the reaction proceeds via
a Schiff base intermediate. This family contains mostly
actinomycetes and includes Mycobacterium tuberculosis
Nei2 (MtuNei2). Complementation experiments in
repair-deficient Escherichia coli (fpg mutY nei triple
and nei nth double mutants), support that MtuNei2 is
functionally active in vivo and recognizes both guanine
and cytosine oxidation products. In addition to this
AcNei2_N domain, enzymes belonging to this family
contain a helix-two turn-helix (H2TH) domain and a
zinc-finger motif.
Length = 114
Score = 27.2 bits (61), Expect = 6.9
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 328 VVLTDTQWEVACHAHHFLDLIPTS 351
VL W L+L+PT
Sbjct: 91 AVLATADWTAVGFRLGVLELVPTR 114
>gnl|CDD|216697 pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family
contains several NIF3 (NGG1p interacting factor 3)
protein homologues. NIF3 interacts with the yeast
transcriptional coactivator NGG1p which is part of the
ADA complex, the exact function of this interaction is
unknown.
Length = 237
Score = 28.0 bits (63), Expect = 7.0
Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 18/59 (30%)
Query: 219 LKRLKAGPLVEDIVKHMVAKSKDKLKKKKIWIYSAHD----------TTVANLLNTLNI 267
LKR+ + KL K I +YSAH +A LL +I
Sbjct: 68 LKRITGDDPKGRRIL--------KLIKNNISLYSAHTNLDAAPGGVNDWLAELLGLESI 118
>gnl|CDD|233603 TIGR01862, N2-ase-Ialpha, nitrogenase component I, alpha chain.
This model represents the alpha chain of all three
varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of
nitrogenase [Central intermediary metabolism, Nitrogen
fixation].
Length = 443
Score = 28.2 bits (63), Expect = 8.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 200 EPLRTVAAFSFAIPARTPAL--KRLKAGPLVEDIVKHMVAKSKDKLKKKKIWIYS 252
E LR +AAF F I R + + K + K++L+ K++ +Y
Sbjct: 278 ESLRAIAAF-FGIEKRAEEVIAEEKAK-------WKPELDYYKERLQGKRVCLYI 324
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.321 0.137 0.432
Gapped
Lambda K H
0.267 0.0775 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,495,910
Number of extensions: 1966541
Number of successful extensions: 1933
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1919
Number of HSP's successfully gapped: 30
Length of query: 395
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 296
Effective length of database: 6,546,556
Effective search space: 1937780576
Effective search space used: 1937780576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.8 bits)