Query psy16948
Match_columns 297
No_of_seqs 165 out of 259
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 17:46:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16948.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16948hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2264|consensus 100.0 8.8E-31 1.9E-35 258.7 14.0 173 65-246 173-349 (907)
2 KOG1022|consensus 100.0 1.1E-28 2.3E-33 243.0 13.1 197 67-279 79-283 (691)
3 PF03016 Exostosin: Exostosin 99.9 3.1E-24 6.8E-29 198.2 11.4 182 85-270 3-216 (302)
4 KOG1021|consensus 99.6 2.8E-15 6.1E-20 149.6 7.4 190 81-280 105-329 (464)
5 KOG1021|consensus 95.4 0.0059 1.3E-07 61.5 1.3 93 113-219 4-96 (464)
6 PF07172 GRP: Glycine rich pro 45.3 20 0.00044 28.7 2.6 20 1-21 1-20 (95)
7 KOG2630|consensus 25.2 32 0.00069 32.3 0.8 57 71-127 123-210 (254)
8 PF06092 DUF943: Enterobacteri 23.5 70 0.0015 28.1 2.6 22 1-22 1-23 (157)
9 PF15240 Pro-rich: Proline-ric 21.4 58 0.0013 29.2 1.7 13 8-20 2-14 (179)
10 TIGR03429 arom_pren_DMATS arom 20.8 69 0.0015 31.8 2.3 67 70-140 160-241 (406)
No 1
>KOG2264|consensus
Probab=99.97 E-value=8.8e-31 Score=258.75 Aligned_cols=173 Identities=25% Similarity=0.528 Sum_probs=138.6
Q ss_pred CCCCCCCcccccccccCcC-CCCCcEEEeCCCCCCCCCCccHHH--HHHHHHhhcCCccCCCCCCceEEEeeccCCCCCC
Q psy16948 65 LPNNQKCRMETCFDFTKCI-GDNFKVYIYPSNPDEEPNTISSLY--QKVLDVVKESRYYTDDPSQACIFILAIDTLDRDP 141 (297)
Q Consensus 65 ~~~~~~C~m~tCFD~sRC~-~~~fkVYVYp~~~~~~~~p~s~~y--~~il~~i~~S~y~T~dP~eACLFv~~id~l~~d~ 141 (297)
+.+.+.|+|++|||||||+ +++|+||||..+....|... .+| +.|.+.|..+-|.|+||+.|||+++.++++..-.
T Consensus 173 p~~~~~c~lhncfdySRCsltSgfPVYvyd~D~~~~G~~~-d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvge~q~P~ 251 (907)
T KOG2264|consen 173 PSQISPCQLHNCFDYSRCSLTSGFPVYVYDSDIITSGQSE-DEWLKQVFQETIPNNVYLVETPDKACIYIHLVGEIQSPV 251 (907)
T ss_pred ccccCcccchhccccccccccCCceeEEeccceeecccch-HHHHHHHHHHhcccceeEeeCCCccEEEEEEeccccCCC
Confidence 3566889999999999999 89999999998875544332 334 3456668889999999999999999999875432
Q ss_pred CCcccccchhhhhhcCCCCC-CCCCeEEEEccCCCCCCccccccCCCCCcEEEEeecCCccccccCCceeccCCCCCCCC
Q psy16948 142 LSSNYVHNVPSKLLKLKHWN-NGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPE 220 (297)
Q Consensus 142 l~~~yv~~~~~~l~~lPyWN-~GrNHlifnl~~~~~P~~~~~~l~~~~g~AIla~As~s~~~fRpgFDVSlPl~~~~~p~ 220 (297)
... --. .++|-+||||. +|+||+|||+.+. .+.++....+++|+||++|++|...+||||||..+|.+. |+
T Consensus 252 ~l~--p~e-leklyslp~w~~dg~Nhvl~Nl~r~--s~~~n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv~--h~- 323 (907)
T KOG2264|consen 252 VLT--PAE-LEKLYSLPHWRTDGFNHVLFNLGRP--SDTQNLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPVN--HI- 323 (907)
T ss_pred cCC--hHh-hhhhhcCccccCCCcceEEEEccCc--cccccceeEeccCceEEEeecceeeeeccCCCcccCccc--cc-
Confidence 111 011 25588999999 9999999999733 345555567899999999999999999999999997554 34
Q ss_pred CCCCCCccccCCCCCCcceEEEeecc
Q psy16948 221 RGGEPGAVISNNFPLRKKYILAFKGK 246 (297)
Q Consensus 221 ~gg~~~~~~~~~~P~~RkyLl~f~Gk 246 (297)
.++..+...+.+.|.+||||++|+||
T Consensus 324 ~~e~~~~e~~p~vP~~RkyL~t~qgk 349 (907)
T KOG2264|consen 324 AVEKNFVELTPLVPFQRKYLITLQGK 349 (907)
T ss_pred ccCccceecCcccchhhheeEEEEee
Confidence 56777888999999999999999996
No 2
>KOG1022|consensus
Probab=99.96 E-value=1.1e-28 Score=242.99 Aligned_cols=197 Identities=27% Similarity=0.386 Sum_probs=171.0
Q ss_pred CCCCCcccccccccCcCCCCCcEEEeCCCCCC------CCCCccHHHHHHHHHhhcCCccCCCCCCceEEEeeccCCCCC
Q psy16948 67 NNQKCRMETCFDFTKCIGDNFKVYIYPSNPDE------EPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRD 140 (297)
Q Consensus 67 ~~~~C~m~tCFD~sRC~~~~fkVYVYp~~~~~------~~~p~s~~y~~il~~i~~S~y~T~dP~eACLFv~~id~l~~d 140 (297)
..-+|+|++||+++||.....|||+|+.++.. .+...|.+|.+++.++..|.|||.|+++||+|++++|.++++
T Consensus 79 g~~sc~~~dcf~~y~c~~~~~KvyIy~l~~~vd~~s~~~~~T~s~ey~~lleA~~~S~yyt~n~N~aclf~Ps~d~lnQn 158 (691)
T KOG1022|consen 79 GLPSCFLADCFLYYQCLFFETKVYIYMLGDIVDAKSIDKGATWSPEYIALLEAWHLSFYYTFNYNGACLFMPSSDELNQN 158 (691)
T ss_pred CCccceehhhhhhhhccccccceeEEehhhhhhhhcccccccccHHHHHHHHHHHhccceecCCCceEEEecchhhhccC
Confidence 34679999999999998778999999999875 466789999999999999999999999999999999999999
Q ss_pred CCCcccccchhhhhhcCCCCCCCCCeEEEEccCCCCCCccccccCCCCCcEEEEeecCCccccccCCceeccCCCCCCCC
Q psy16948 141 PLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPE 220 (297)
Q Consensus 141 ~l~~~yv~~~~~~l~~lPyWN~GrNHlifnl~~~~~P~~~~~~l~~~~g~AIla~As~s~~~fRpgFDVSlPl~~~~~p~ 220 (297)
+++- +..+..|+++-.|..|.||++||+.+|.-|+|++. +++...+|++++++|.+|+||+|+||+||..++ .
T Consensus 159 ~l~~---kl~~~ala~l~~wdrg~nH~~fnmLpGg~p~ynta-ldv~~d~a~~~gggf~tW~yr~g~dv~ipv~Sp---~ 231 (691)
T KOG1022|consen 159 PLSW---KLEKVALAKLLVWDRGVNHEGFNMLPGGDPTYNTA-LDVGQDEAWYSGGGFGTWKYRKGNDVYIPVRSP---G 231 (691)
T ss_pred cchH---HHHHHHHhcccchhcccceeeEeeccCCCCCcccc-ccCCcceeEEecCCcCcccccCCCccccccccc---c
Confidence 8753 34456688889999999999999999999999988 889999999999999999999999999999984 2
Q ss_pred CCCCCCccccCCCCCCcceEEEeeccceeccCChHHHHhhhcc--cCCCceEEEeecCCCC
Q psy16948 221 RGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHL--HNGADMVLVTTCKHGK 279 (297)
Q Consensus 221 ~gg~~~~~~~~~~P~~RkyLl~f~Gkry~~gi~s~~Rn~L~~l--~ng~dvvv~~~C~~~~ 279 (297)
..+ ++-.-+..|++++.-.|. |+|.++|..|.++ +.++..+++..|-+..
T Consensus 232 ---~v~--~~~~~~g~r~~~l~~~q~----n~~pr~r~~l~el~~kh~e~~l~l~~c~nls 283 (691)
T KOG1022|consen 232 ---NVG--RAFLYDGSRYRVLQDCQE----NYGPRIRVSLIELLSKHEERELELPFCLNLS 283 (691)
T ss_pred ---ccC--ccccCCccceeeeecccc----ccchHhHHhHHHHHhhccceEEecchhcccc
Confidence 112 223457789999988874 8999999999976 5688899999997654
No 3
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=99.91 E-value=3.1e-24 Score=198.21 Aligned_cols=182 Identities=25% Similarity=0.352 Sum_probs=125.9
Q ss_pred CCCcEEEeCCCCC---------C------CCCCccHHHHHHHHHhhcCCccCCCCCCceEEEeeccCCCC------C---
Q psy16948 85 DNFKVYIYPSNPD---------E------EPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDR------D--- 140 (297)
Q Consensus 85 ~~fkVYVYp~~~~---------~------~~~p~s~~y~~il~~i~~S~y~T~dP~eACLFv~~id~l~~------d--- 140 (297)
++|||||||.... . ...........+.+.|+.|++.|.||+|||+|++++++... .
T Consensus 3 ~~lkVYVY~lp~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~~~~ 82 (302)
T PF03016_consen 3 RGLKVYVYPLPPKFNKDLLDPREDEQCSWYETSQYALEVILHEALLNSPFRTDDPEEADLFFVPFYSSCYFHHWWGSPNS 82 (302)
T ss_pred CCCEEEEEeCCccccccceeccccccCCCcccccchHHHHHHHHHHhCCcEeCCHHHCeEEEEEcccccccccccCCccc
Confidence 4899999998811 0 01112223345999999999999999999999999887433 1
Q ss_pred -CCCcccccchhhhhhcCCCCC--CCCCeEEEEccC-C-CCCCccccccCCCCCcEEEEeecCCccccccCCceeccCCC
Q psy16948 141 -PLSSNYVHNVPSKLLKLKHWN--NGKNHIVFNLFS-G-TWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQ 215 (297)
Q Consensus 141 -~l~~~yv~~~~~~l~~lPyWN--~GrNHlifnl~~-~-~~P~~~~~~l~~~~g~AIla~As~s~~~fRpgFDVSlPl~~ 215 (297)
.....+...+...++++|||| +|+|||+++++. | .++.+.. .+....+.+|++.+++....|||+|||++|.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~ 161 (302)
T PF03016_consen 83 GADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNP-RLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFV 161 (302)
T ss_pred hhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccH-hhhccchhheeccCCCCcCcccCCCCeeccccc
Confidence 012234455667788999999 599999999985 1 2233333 266778899888999999999999999999987
Q ss_pred CCCCCCCCCCCccccCCCCCCcceEEEeeccceeccC--ChHHHHhhhc-ccCCCceE
Q psy16948 216 KDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGI--GSEVRNSLYH-LHNGADMV 270 (297)
Q Consensus 216 ~~~p~~gg~~~~~~~~~~P~~RkyLl~f~Gkry~~gi--~s~~Rn~L~~-l~ng~dvv 270 (297)
..++... +.......+.+|++|++|+|..+..+. +..+|..|.. +++..+..
T Consensus 162 ~~~~~~~---~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~ 216 (302)
T PF03016_consen 162 PPSSLPD---WRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFR 216 (302)
T ss_pred cccccCC---ccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcce
Confidence 5433211 111134567899999999998654432 3567777663 44444433
No 4
>KOG1021|consensus
Probab=99.57 E-value=2.8e-15 Score=149.62 Aligned_cols=190 Identities=21% Similarity=0.275 Sum_probs=124.8
Q ss_pred CcC----CCCCcEEEeCCCCCC--CCC--CccHHHH---HHHHHh--hcCCccCCCCCCceEEEeeccC-CCC--C----
Q psy16948 81 KCI----GDNFKVYIYPSNPDE--EPN--TISSLYQ---KVLDVV--KESRYYTDDPSQACIFILAIDT-LDR--D---- 140 (297)
Q Consensus 81 RC~----~~~fkVYVYp~~~~~--~~~--p~s~~y~---~il~~i--~~S~y~T~dP~eACLFv~~id~-l~~--d---- 140 (297)
.|. ...+|||+|..++.+ +.+ .++..|. .+.+.+ ..+++.|.||+||.+|++|+.. ++. .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~ 184 (464)
T KOG1021|consen 105 MCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWP 184 (464)
T ss_pred hhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccC
Confidence 666 246999999988544 333 4455552 466666 5789999999999999998754 211 1
Q ss_pred ---------CCCcccccchhhhhhcCCCCC--CCCCeEEEEccCCCCCCccc--cccCCCCCcEEEEeecCCccccccC-
Q psy16948 141 ---------PLSSNYVHNVPSKLLKLKHWN--NGKNHIVFNLFSGTWPDYLE--EDLGFDTGQAILAKASMSVTHFRTG- 206 (297)
Q Consensus 141 ---------~l~~~yv~~~~~~l~~lPyWN--~GrNHlifnl~~~~~P~~~~--~~l~~~~g~AIla~As~s~~~fRpg- 206 (297)
....+||..+ ++++|+|| +|+||+++.+|.. |+.... .........++ ++-+..+..|++.
T Consensus 185 ~~~~~~~~~~~~~~~i~~~---~~~~p~W~Rs~G~DH~~v~~~~~-~~~~~~~~~~~~~~~i~~~-~n~a~ls~~~~~~~ 259 (464)
T KOG1021|consen 185 DERVNAILRSILQDYIVAL---LSKQPYWNRSSGRDHFFVACHDW-GDFRRRSDWGASISLIPEF-CNGALLSLEFFPWN 259 (464)
T ss_pred CcccchHHHHHHHHHHHHH---HhcCchhhccCCCceEEEeCCcc-hheeeccchhhHHHHHHhh-CCcceeecccccCC
Confidence 1223344444 67899999 9999999999842 443321 11222233332 3312356777888
Q ss_pred CceeccCCCCCCCCCCCCCCccccCCCCCCcceEEEeeccceeccCChHHHHhhhcc-cCCCceEEEeecCCCCC
Q psy16948 207 FDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHL-HNGADMVLVTTCKHGKN 280 (297)
Q Consensus 207 FDVSlPl~~~~~p~~gg~~~~~~~~~~P~~RkyLl~f~Gkry~~gi~s~~Rn~L~~l-~ng~dvvv~~~C~~~~~ 280 (297)
+||+||.+...||...... ..+......+|++|++|+|.+ .|+.+|..|.++ .++.++-+...|..|+.
T Consensus 260 ~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~----~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~ 329 (464)
T KOG1021|consen 260 KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP----AGGQIRSILLDLWKKDPDTEVFVNCPRGKV 329 (464)
T ss_pred CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc----cCCcHHHHHHHHhhcCcCccccccCCCCcc
Confidence 9999999976666543322 112233446899999999953 899999999965 44466667777877643
No 5
>KOG1021|consensus
Probab=95.44 E-value=0.0059 Score=61.51 Aligned_cols=93 Identities=52% Similarity=0.935 Sum_probs=72.6
Q ss_pred HhhcCCccCCCCCCceEEEeeccCCCCCCCCcccccchhhhhhcCCCCCCCCCeEEEEccCCCCCCccccccCCCCCcEE
Q psy16948 113 VVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAI 192 (297)
Q Consensus 113 ~i~~S~y~T~dP~eACLFv~~id~l~~d~l~~~yv~~~~~~l~~lPyWN~GrNHlifnl~~~~~P~~~~~~l~~~~g~AI 192 (297)
+++.+.++|.++..+|+++..+++...+..+..+. .+.+...|+.|.+|++++. .|++..+. +++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~ 69 (464)
T KOG1021|consen 4 AIENSRFYTSDPTIACLLVLSLSTLSRDSLSSDYV-----KLSSSILWNNGRNHFSFSL---SWPDQKPR------GQAI 69 (464)
T ss_pred cccCCcccccccchhhhhhhhhcccccccccccce-----eeeccccccccccceeccc---cccccCCc------chhc
Confidence 45678899999999999999888876655444443 3556678999999999987 46654432 7888
Q ss_pred EEeecCCccccccCCceeccCCCCCCC
Q psy16948 193 LAKASMSVTHFRTGFDVSIPLFQKDLP 219 (297)
Q Consensus 193 la~As~s~~~fRpgFDVSlPl~~~~~p 219 (297)
-+++.......|++||..|+...+.++
T Consensus 70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~ 96 (464)
T KOG1021|consen 70 CAGASVYVYNLPSGFDVSLLLFHKQIP 96 (464)
T ss_pred ccCcceeeeccchhhhhhhhccCcccc
Confidence 777887889999999999999986543
No 6
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=45.26 E-value=20 Score=28.70 Aligned_cols=20 Identities=40% Similarity=0.359 Sum_probs=11.2
Q ss_pred CCcchhHHHHHHHHHHHHHHH
Q psy16948 1 MQFKKRFLLVLLSCAFLAFCY 21 (297)
Q Consensus 1 mq~~~r~~~~~~~~~~l~~~~ 21 (297)
|= -|.+|||+|+.|.|||+-
T Consensus 1 Ma-SK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLIS 20 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHHH
Confidence 53 455676766655554443
No 7
>KOG2630|consensus
Probab=25.15 E-value=32 Score=32.27 Aligned_cols=57 Identities=25% Similarity=0.336 Sum_probs=37.0
Q ss_pred CcccccccccCcC-CCCCcEEEeCCCCCC-------------------------CCC-CccHHHHHHHHHhhcCC----c
Q psy16948 71 CRMETCFDFTKCI-GDNFKVYIYPSNPDE-------------------------EPN-TISSLYQKVLDVVKESR----Y 119 (297)
Q Consensus 71 C~m~tCFD~sRC~-~~~fkVYVYp~~~~~-------------------------~~~-p~s~~y~~il~~i~~S~----y 119 (297)
=.+.+..+.-+|- ..+++||||..+.-. .|. ..+.+|.+|...|..|+ |
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~eiLf 202 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREILF 202 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhheEE
Confidence 4567777778887 578999999866422 121 24567888888886654 4
Q ss_pred cCCCCCCc
Q psy16948 120 YTDDPSQA 127 (297)
Q Consensus 120 ~T~dP~eA 127 (297)
+|+.|.||
T Consensus 203 LTd~~~Ea 210 (254)
T KOG2630|consen 203 LTDVPREA 210 (254)
T ss_pred eccChHHH
Confidence 44444443
No 8
>PF06092 DUF943: Enterobacterial putative membrane protein (DUF943); InterPro: IPR010351 This family consists of several hypothetical proteins from Escherichia coli, Yersinia pestis and Salmonella typhi.
Probab=23.47 E-value=70 Score=28.08 Aligned_cols=22 Identities=18% Similarity=0.416 Sum_probs=12.8
Q ss_pred CCcchhHHHH-HHHHHHHHHHHH
Q psy16948 1 MQFKKRFLLV-LLSCAFLAFCYF 22 (297)
Q Consensus 1 mq~~~r~~~~-~~~~~~l~~~~~ 22 (297)
|++|++.+++ +++++.+++++|
T Consensus 1 mkkk~~~ii~~l~l~~~~~y~~W 23 (157)
T PF06092_consen 1 MKKKSKKIIIALFLLACILYFLW 23 (157)
T ss_pred CCchhhhhHHHHHHHHHHHHhhh
Confidence 8888775544 344344445665
No 9
>PF15240 Pro-rich: Proline-rich
Probab=21.41 E-value=58 Score=29.18 Aligned_cols=13 Identities=69% Similarity=0.884 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHH
Q psy16948 8 LLVLLSCAFLAFC 20 (297)
Q Consensus 8 ~~~~~~~~~l~~~ 20 (297)
|||+||||.|+|-
T Consensus 2 LlVLLSvALLALS 14 (179)
T PF15240_consen 2 LLVLLSVALLALS 14 (179)
T ss_pred hhHHHHHHHHHhh
Confidence 7888899888743
No 10
>TIGR03429 arom_pren_DMATS aromatic prenyltransferase, DMATS type. Members of this protein family are mostly fungal enzymes of secondary metabolite production. Characterized or partially characterized members include several examples of dimethylallyltryptophan synthase, a brevianamide F prenyltransferase, LtxC from lyngbyatoxin biosynthesis, and a probable dimethylallyl tyrosine synthase.
Probab=20.80 E-value=69 Score=31.78 Aligned_cols=67 Identities=30% Similarity=0.432 Sum_probs=39.8
Q ss_pred CCcccccccccCcCCCCCcEEEeCCCCCC-CCCCccHHHHHHHHHhhc---C-----------CccCCCCCCceEEEeec
Q psy16948 70 KCRMETCFDFTKCIGDNFKVYIYPSNPDE-EPNTISSLYQKVLDVVKE---S-----------RYYTDDPSQACIFILAI 134 (297)
Q Consensus 70 ~C~m~tCFD~sRC~~~~fkVYVYp~~~~~-~~~p~s~~y~~il~~i~~---S-----------~y~T~dP~eACLFv~~i 134 (297)
.-++.-.||+ +=..-.+|+|+||.-+.. .|.+..+. ++++|+. - .|.++.+...-++++++
T Consensus 160 ~~~~~~afdl-~~~~~~~K~Yf~P~~ka~~tg~~~~~l---~~~air~l~~~~~~~~al~~l~~y~~~~~~~~~~~~ls~ 235 (406)
T TIGR03429 160 RPQMWLAFDL-KGGGVVLKVYFYPRLKAAATGVPSSEL---VFEAIRRLDPKGDLLPALDLLEEYLASRPATLRPELLAI 235 (406)
T ss_pred ccceeEEEEe-CCCCEEEEEEecCchhhhhcCCCHHHH---HHHHHHhccccCcchHHHHHHHHHHhhCCCCCCCcEEEE
Confidence 3568889999 322235899999965321 12222222 3333321 1 26677777777888999
Q ss_pred cCCCCC
Q psy16948 135 DTLDRD 140 (297)
Q Consensus 135 d~l~~d 140 (297)
|.++..
T Consensus 236 D~v~p~ 241 (406)
T TIGR03429 236 DCVDPA 241 (406)
T ss_pred EcCChh
Confidence 987643
Done!