BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16949
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 345 bits (885), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 159/223 (71%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
Q+EE YVCIY++R D +LFHH+GGVD+GDVDAKA KL + V + + E + LL++
Sbjct: 115 QEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEK-LNPEDIKKHLLVHA 173
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KK ++A F++ L+N Y +LYFTYLEINPLVVT D +YILDLAAK+D+TAD+IC+ +W
Sbjct: 174 PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKW 233
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++PPPFGR+AYPEEAYIADLD+KSGASLKLT+LN KGRIWTMVAGGGASVVYSDTIC
Sbjct: 234 GDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTIC 293
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLGG +ELANYGEYSGAPSEQQTY+YAKTILSLMT+EKHP GK
Sbjct: 294 DLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGK 336
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 344 bits (883), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 158/223 (70%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
Q+EE YVCIY++R D +LFHH+GGVD+GDVDAKA KL + V + + E + LL++
Sbjct: 115 QEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEK-LNPEDIKKHLLVHA 173
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KK ++A F++ L+N Y +LYFTYLEINPLVVT D +Y+LDLAAK+D+TAD+IC+ +W
Sbjct: 174 PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKW 233
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++PPPFGR+AYPEEAYIADLD+KSGASLKLT+LN KGRIWTMVAGGGASVVYSDTIC
Sbjct: 234 GDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTIC 293
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLGG +ELANYGEYSGAPSEQQTY+YAKTILSLMT+EKHP GK
Sbjct: 294 DLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGK 336
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 344 bits (883), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 159/223 (71%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
Q EE YVCIY++R D +LFHH+GGVD+GDVDAKA KL + V + + E + LL++
Sbjct: 115 QAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEK-LNTEDIKRHLLVHA 173
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KK ++A F++ L+N Y +LYFTYLEINPLVVT D +YILDLAAK+D+TAD+IC+ +W
Sbjct: 174 PEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKW 233
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++PPPFGR+AYPEEAYIADLD+KSGASLKLT+LN KGRIWTMVAGGGASVVYSDTIC
Sbjct: 234 GDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTIC 293
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLGG +ELANYGEYSGAPSEQQTY+YAKTILSLMT+EKHP+GK
Sbjct: 294 DLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGK 336
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 343 bits (879), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 158/223 (70%), Positives = 191/223 (85%), Gaps = 1/223 (0%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
Q EE YVCIY++R D +LFHH+GGVD+GDVDAKA KL + V + + E + LL++
Sbjct: 115 QAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEK-LNPEDIKKHLLVHA 173
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KK ++A F++ L+N Y +LYFTYLEINPLVVT D +Y+LDLAAK+D+TAD+IC+ +W
Sbjct: 174 PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKW 233
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++PPPFGR+AYPEEAYIADLD+KSGASLKLT+LN KGRIWTMVAGGGASVVYSDTIC
Sbjct: 234 GDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTIC 293
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLGG +ELANYGEYSGAPSEQQTY+YAKTILSLMT+EKHP GK
Sbjct: 294 DLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGK 336
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/223 (70%), Positives = 190/223 (85%), Gaps = 1/223 (0%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
Q EE YVCIY++R D +LFHH+GGVD+GDVD KA KL + V + + E + LL++
Sbjct: 115 QAEEFYVCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEK-LNAEDIKRHLLVHA 173
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KK ++A F++ L+N Y +LYFTYLEINPLVVT D +YILDLAAK+D+TAD+IC+ +W
Sbjct: 174 PEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKW 233
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++PPPFGR+AYPEEAYIADLD+KSGASLKLT+LN KGRIWTMVAGGGASVVYSDTIC
Sbjct: 234 GDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTIC 293
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLGG +ELANYGEYSGAPSEQQTY+YAKTILSLMT+EKHP GK
Sbjct: 294 DLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGK 336
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 176/239 (73%), Gaps = 20/239 (8%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPV--GQTGVT--EEQVTSKL 65
+ +E Y+ IYS R D I+F+ QGGVDIGDV+ KA + +PV + +T +E++T+ L
Sbjct: 114 EKDEMYIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQLNENAMTPSDEELTTLL 173
Query: 66 LINVAPAKKA-MVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFI 124
P K + +V +FV LY Y +L+FTYLEINP V+ N+ I++LDLAA+LD TA+F+
Sbjct: 174 ----GPLKDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFL 229
Query: 125 CRAQW----------GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTM 174
C +W ++++P PFGRD EE YI+++D+K+GASLKLTILN+KGR+WTM
Sbjct: 230 CADKWKSRLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTM 289
Query: 175 VAGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQ-EKHPQGK 232
VAGGGASVV++DT+CDLGGASELANYGEYSG PSE QTYEYAKT+LS+MT+ P GK
Sbjct: 290 VAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDGK 348
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 220 bits (561), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 159/254 (62%), Gaps = 32/254 (12%)
Query: 11 DEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGV-TEEQVTSKLLINV 69
+ E Y+ I S R D ILF ++GGVD+GDVDAKA KL +PV + + + S LL ++
Sbjct: 144 NTEYYININSVREGDWILFCNEGGVDVGDVDAKARKLLVPVRLSEFPSRATIASTLLSDI 203
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDT----IYILDLAAKLDSTADFIC 125
+ + F+ LY++YV+ FTYLEINPLVV ++ LDLAAKLD TA+F C
Sbjct: 204 PVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPTAKGADVFYLDLAAKLDQTAEFEC 263
Query: 126 RAQWG--------------------NID------YPPPFGRDAYPEEAYIADLDSKSGAS 159
A+W N D +P PFGR+ EEAY+ LD+K+GAS
Sbjct: 264 GAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPAPFGRELSKEEAYVQGLDAKTGAS 323
Query: 160 LKLTILNKKGRIWTMVAGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTI 219
LKLTILN +GR+W +VAGGGASVVY+D + G A ELANYGEYSGAP++ QTYEYAKT+
Sbjct: 324 LKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYEYAKTV 383
Query: 220 LSLMTQ-EKHPQGK 232
L LMT+ E GK
Sbjct: 384 LDLMTRGEPRADGK 397
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 141/227 (62%), Gaps = 12/227 (5%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVT----SKL 65
D+E Y+ I S R TI F GG++I + K + +P TE+ +T + L
Sbjct: 113 HDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTVFLP------TEKAMTPDACAPL 166
Query: 66 LINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFIC 125
+ + + + F+ +Y+++ +L F++LE+NP + N Y LD+ +LD TA F
Sbjct: 167 IATLPLEVRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKN 226
Query: 126 RAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYS 185
+WGNI +P PFGR P E++I +LD K+ +SLK T+LN KGRIWTMVAGGGASV+Y+
Sbjct: 227 FKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYA 286
Query: 186 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DT+ DLG ASEL NY EYSGAP+E++ +YA+ +L T + P G+
Sbjct: 287 DTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATAD--PDGR 331
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
+EE Y+ + S R +I F GG++I + K + +P G + E + + L+ +
Sbjct: 113 HNEEYYLNVVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTPE--ICAPLVATL 170
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
KA + +F+ ++ ++ +L FT+LE+NP + + + Y LD+ +LD TA F +W
Sbjct: 171 PLEIKAEIEEFIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKW 230
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++P PFGR P E++I LD K+ ASLK T+LN KGRIWTMVAGGGASV+Y+DT+
Sbjct: 231 GDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVG 290
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLG ASEL NY EYSGAP E + +YA+ ++ T +P GK
Sbjct: 291 DLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATA--NPDGK 331
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 139/227 (61%), Gaps = 12/227 (5%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVT----SKL 65
D+E Y+ I S R TI F GG++I + K + +P TE+ +T + L
Sbjct: 113 HDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLP------TEKPMTPDACAPL 166
Query: 66 LINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFIC 125
+ + + + F+ ++ ++ +L F++LE+NP + N Y LD+ +LD TA F
Sbjct: 167 IATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKN 226
Query: 126 RAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYS 185
+WGNI++P PFGR E +I DLD K+ ASLK T+LN KGRIWTMVAGGGASV+Y+
Sbjct: 227 FKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYA 286
Query: 186 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DT+ DLG ASEL NY EYSGAP+E++ +YA+ +L T + P G+
Sbjct: 287 DTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATAD--PDGR 331
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
+EE Y+ I S R +I F GG+DI + K + IP G + E + + L+ +
Sbjct: 113 HNEEFYLNIVSDRLGCSISFSECGGIDIEENWDKVKTITIPTGASLTFE--ICAPLVATL 170
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
K + F+ ++ ++ +L FT+LE+NP + + Y LD+ +LD TA F +W
Sbjct: 171 PLEIKGELEDFIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKW 230
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++P PFGR E++I LD K+ ASLK T+LN KGRIWTMVAGGGASV+Y+DT+
Sbjct: 231 GDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVG 290
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLG ASEL NY EYSGAP E + +YA+ ++ T +P GK
Sbjct: 291 DLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATA--NPDGK 331
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 177 bits (448), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGDVDAKALKLEIPVGQTGVTEEQVTSKLLINV 69
D+E Y+ I S R TI F GG++I + K + +P ++ E V + L+ +
Sbjct: 113 HDQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPAEKSMTLE--VCAPLIATL 170
Query: 70 APAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADFICRAQW 129
+A + F+ + ++ +L F+++E+NP + + + LD+ +LD TA F +W
Sbjct: 171 PLEVRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKW 230
Query: 130 GNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTIC 189
G+I++P PFGR E +I LD K+ ASLK T+LN KGRIWTMVAGGGASV+Y+DT+
Sbjct: 231 GDIEFPLPFGRVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVG 290
Query: 190 DLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
DLG ASEL NY EYSGAP+E++ +YA+ ++ T + P G+
Sbjct: 291 DLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATTD--PDGR 331
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 122/228 (53%), Gaps = 30/228 (13%)
Query: 10 QDEEAYVCIYSSRNSDTILFHHQGGVDIGD----VDAKALKLEIPVGQTGVTEEQVTSKL 65
D+E Y+ I S R TI F GG++I + V L E P+ + L
Sbjct: 113 HDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLSTEKPM------TPDACAPL 166
Query: 66 LINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTADF-I 124
+ + + + F+ ++ ++ +L F++LE+NP + N Y LD+ +LD TA F
Sbjct: 167 IATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKT 226
Query: 125 CRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVY 184
R++WGNI++P PFGR E +I DLD K+ ASLK T+LN KGRIWTMVAGG
Sbjct: 227 SRSKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG------ 280
Query: 185 SDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGK 232
EL NY EYSGAP+E++ +YA+ +L T + P G+
Sbjct: 281 -----------ELENYAEYSGAPNEEEVLQYARVVLDCATAD--PDGR 315
>sp|B8FLW6|SUCC_DESAA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum
alkenivorans (strain AK-01) GN=sucC PE=3 SV=1
Length = 386
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 8 FDQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKALK--LEIPV----GQTGVTEE 59
D +E Y I R + I+ GG+DI +V A + +++PV G G
Sbjct: 102 LDIAKELYFSIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCR 161
Query: 60 QVTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVT-NDTIYILDLAAKLD 118
Q +L N+ PA K V LY M+++ + LEINPLV+T +D I LD D
Sbjct: 162 QAAYRL--NLPPAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFD 219
Query: 119 STADFICR--AQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVA 176
+A + + ++ ++D P +A + L + G + MV
Sbjct: 220 DSALYRHKDIQEYRDLDEEEPLEVEA---------------SKFNLNYIKMDGNVGNMVN 264
Query: 177 GGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D I G +E AN+ + G + +Q + ILS
Sbjct: 265 GAGLAMATMDIIKQAG--AEPANFLDVGGGANAEQVENGFRIILS 307
>sp|A8FD73|SUCC_BACP2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus
(strain SAFR-032) GN=sucC PE=3 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKA------LKLEIPVGQTGVTEEQ 60
D +E YV + R + I+ +GG +I +V K + ++ +G G +
Sbjct: 103 DIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQARE 162
Query: 61 VTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
V K IN+ KF+T+LYN ++ + EINPLVVT D ++ L AKL+
Sbjct: 163 VAFK--INIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDG-KVMALDAKLNFD 219
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGA 180
++ + R Q ++Y D P+E + D L+ ++ G I MV G G
Sbjct: 220 SNALYR-QKDILEYRDLDEED--PKEIEASKYD--------LSYISLDGNIGCMVNGAGL 268
Query: 181 SVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ D I GG + AN+ + G + ++ E K ILS
Sbjct: 269 AMSTMDIIKHYGG--DPANFLDVGGGATAEKVTEAFKIILS 307
>sp|Q3B5J6|SUCC_PELLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon
luteolum (strain DSM 273) GN=sucC PE=3 SV=1
Length = 391
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 11 DEEAYVCIYSSR--NSDTILFHHQGGVDIGDV--DAKALKLEIPV----GQTGVTEEQVT 62
D E YV I R +++ ++ +GG++I V + L L+I V G G +
Sbjct: 109 DREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQGFQAREAA 168
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
L + + A+ F+TALYN Y ++ EINPLVVT + + LD DS A
Sbjct: 169 FFLGLEGEQFRNAV--SFITALYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNA 226
Query: 122 -----DFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVA 176
DFI + +I PF +A SKS L + G + MV
Sbjct: 227 LYRHKDFI---ELRDISEEDPFEVEA-----------SKS----NLNYVRLDGNVGCMVN 268
Query: 177 GGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D I GG AN+ + G S Q E K ILS
Sbjct: 269 GAGLAMATMDMIQLAGGRP--ANFLDVGGGASPQTVEEGFKIILS 311
>sp|A1BE51|SUCC_CHLPD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium
phaeobacteroides (strain DSM 266) GN=sucC PE=3 SV=1
Length = 392
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 11 DEEAYVCIYSSRNS--DTILFHHQGGVDIGDV----DAKALKLEI-PV-GQTGVTEEQVT 62
D+E YV I R++ + ++ +GG++I V K LK+++ P+ G Q
Sbjct: 109 DKEFYVGITLDRSTSQNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPLFGLQAFQARQAA 168
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
L + K + KF+TALYN Y ++ EINPLVVT + + LD DS A
Sbjct: 169 FFLELEGEQFKNTV--KFITALYNAYTSIDAAIAEINPLVVTKEGRVLALDAKINFDSNA 226
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGG 179
F + + +I PF +A SKS L + G + MV G G
Sbjct: 227 LFRHKDFLELRDISEEDPFEVEA-----------SKS----NLNYVRLDGNVGCMVNGAG 271
Query: 180 ASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ D I GG AN+ + G S Q E K ILS
Sbjct: 272 LAMGTMDMIQLAGGRP--ANFLDVGGGASPQTVEEGFKIILS 311
>sp|B3EN95|SUCC_CHLPB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium
phaeobacteroides (strain BS1) GN=sucC PE=3 SV=1
Length = 391
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 11 DEEAYVCIYSSR--NSDTILFHHQGGVDIGDVDA----KALKLEI-PV-GQTGVTEEQVT 62
++E YV I R +++ ++ +GG++I V K LK++I P+ G G Q
Sbjct: 109 EKEFYVGITLDRATSNNVLMVSTEGGMEIEKVAEETPDKILKIQIDPLHGLLGFQARQAA 168
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
L ++ K + KF+TALYN YV++ + EINPLVVT + + LD DS A
Sbjct: 169 FFLELDGERFKNGV--KFITALYNAYVSIDASLAEINPLVVTAEGRVLALDAKINFDSNA 226
Query: 122 -----DFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVA 176
DF+ G D PF +A SKS L + G + MV
Sbjct: 227 LYRHKDFLELRDTGEED---PFEVEA-----------SKS----NLNYVRLDGNVGCMVN 268
Query: 177 GGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D I GG AN+ + G S + E K I+S
Sbjct: 269 GAGLAMGTMDMIQLAGGKP--ANFLDVGGTASPETVTEGFKIIMS 311
>sp|Q2YXM1|SUCC_STAAB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=sucC PE=3 SV=1
Length = 388
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + +LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLVLDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|B9DPG0|SUCC_STACT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
carnosus (strain TM300) GN=sucC PE=3 SV=1
Length = 388
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 9 DQDEEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQV 61
D +E YV R +D T++ +GG +I +V AK+ K I PV G+ Q
Sbjct: 103 DIKKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETIDPV--VGLAPFQ- 159
Query: 62 TSKLLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDS 119
++ N+ K+++ AKF+ ALYN+++ + +EINPLV+T + D+ A LD+
Sbjct: 160 ARRIAFNINIPKESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEG----DVLA-LDA 214
Query: 120 TADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGG 179
+F A + + D RD E D + L+ + G I MV G G
Sbjct: 215 KINFDDNALFRHKDILEL--RDLEEE-----DPKEIEASKYDLSYIALDGDIGCMVNGAG 267
Query: 180 ASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ DTI GG AN+ + G ++++ E K IL
Sbjct: 268 LAMATMDTINHFGGNP--ANFLDVGGGATKEKVTEAFKIILG 307
>sp|Q8CPH5|SUCC_STAES Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sucC PE=3 SV=1
Length = 388
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 28/223 (12%)
Query: 9 DQDEEAYVCIYSSRNSD--TILFHHQGGVDIGDVDA----KALKLEI-PVGQTGVTEEQV 61
D +E YV R +D T++ +GG +I +V A K K I PV G++ Q
Sbjct: 103 DIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPV--VGLSPYQA 160
Query: 62 TSKLL-INVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
IN+ KF+ ALYN+++ + +EINPLV T D +L L AKL
Sbjct: 161 RRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDG-QVLALDAKL--- 216
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK--LTILNKKGRIWTMVAGG 178
N D F E + + D K + K L+ + G I MV G
Sbjct: 217 ----------NFDDNALFRHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G ++ DTI GG AN+ + G ++++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDVGGGATKEKVTEAFKIILG 307
>sp|Q5HPU5|SUCC_STAEQ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sucC PE=3
SV=1
Length = 388
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 28/223 (12%)
Query: 9 DQDEEAYVCIYSSRNSD--TILFHHQGGVDIGDVDA----KALKLEI-PVGQTGVTEEQV 61
D +E YV R +D T++ +GG +I +V A K K I PV G++ Q
Sbjct: 103 DIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPV--VGLSPYQA 160
Query: 62 TSKLL-INVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
IN+ KF+ ALYN+++ + +EINPLV T D +L L AKL
Sbjct: 161 RRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDG-QVLALDAKL--- 216
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK--LTILNKKGRIWTMVAGG 178
N D F E + + D K + K L+ + G I MV G
Sbjct: 217 ----------NFDDNALFRHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G ++ DTI GG AN+ + G ++++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDVGGGATKEKVTEAFKIILG 307
>sp|Q0KE75|SUCC_CUPNH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Cupriavidus
necator (strain ATCC 17699 / H16 / DSM 428 / Stanier
337) GN=sucC PE=3 SV=1
Length = 388
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 42/230 (18%)
Query: 9 DQDEEAYVCIYSSRNSDTI--LFHHQGGVDIGDVDAKA------LKLEIPVGQTGVTEEQ 60
D +E YV + R S + + +GG+DI +V A + L +E VG T +
Sbjct: 103 DIKKELYVSLVVDRVSQKVALMASSEGGMDIEEVAAHSPEKIHTLIIEPSVGLTDAEADD 162
Query: 61 VTSKLLI---NVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAK 116
+ K+ + +VA A++A+ LY + + EINPL++T D + LD
Sbjct: 163 IARKIGVPDTSVAQARQAL-----QGLYKAFYETDASLAEINPLILTGDGKVIALDAKFN 217
Query: 117 LDSTADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK-----LTILNKKGRI 171
DS A F +PE DLD + ++ L ++ G I
Sbjct: 218 FDSNALF------------------RHPEIVAYRDLDEEDANEIEASKFDLAYISLDGNI 259
Query: 172 WTMVAGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
+V G G ++ DTI GG E AN+ + G + ++ E K +LS
Sbjct: 260 GCLVNGAGLAMATMDTIKLFGG--EPANFLDVGGGATTEKVTEAFKLMLS 307
>sp|C0ZFB3|SUCC_BREBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brevibacillus
brevis (strain 47 / JCM 6285 / NBRC 100599) GN=sucC PE=3
SV=1
Length = 386
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDA----KALKLEI-PV-GQTGVTEEQ 60
D +E YV + R + +++ +GG+DI +V A K K + PV G G +
Sbjct: 103 DIKKEYYVGVVVDRATGSVVMMASEEGGMDIEEVAANNPEKIFKEVVDPVTGLNGFQARR 162
Query: 61 VT-----SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAA 115
+ K LIN A AKF+ +LY +V+ + EINPLVVT D ++ L A
Sbjct: 163 LAYAINIPKELINKA-------AKFMMSLYQAFVDKDASIAEINPLVVTGDG-EVMALDA 214
Query: 116 KLDSTADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSK-----SGASLKLTILNKKGR 170
KL+ ++ + R +P+ + DLD + + L+ + G
Sbjct: 215 KLNFDSNALYR----------------HPDIVALRDLDEEDEKEIEASKFDLSYIALDGN 258
Query: 171 IWTMVAGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
I MV G G ++ D + GG + AN+ + G +E++ E K IL
Sbjct: 259 IGCMVNGAGLAMATMDIVKFYGG--DPANFLDVGGGATEEKVTEAFKIIL 306
>sp|Q6GHJ0|SUCC_STAAR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=sucC PE=3 SV=1
Length = 388
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|P66872|SUCC_STAAW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MW2) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|A8Z3S5|SUCC_STAAT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|Q6G9W8|SUCC_STAAS Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|P99071|SUCC_STAAN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain N315) GN=sucC PE=1 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|P66871|SUCC_STAAM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sucC PE=1 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|A6QGE5|SUCC_STAAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Newman) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|Q5HGI7|SUCC_STAAC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain COL) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|A5ISD0|SUCC_STAA9 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH9) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|Q2FZ37|SUCC_STAA8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain NCTC 8325) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|Q2FHJ3|SUCC_STAA3 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|A6U164|SUCC_STAA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH1) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|A7X1L8|SUCC_STAA1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 12 EEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQVTSK 64
+E YV R +D T++ +GG +I +V AK K I PV G++ Q +
Sbjct: 106 KEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--IGLSPFQ-ARR 162
Query: 65 LLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ N+ K+++ AKF+ ALYN+++ + +EINPLV T D + LD D A
Sbjct: 163 IAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNA 222
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEE-AYIADLDSKSGASLKLTILNKKGRIWTMVAGG 178
F + + +++ P +A + +YIA LD G I MV G
Sbjct: 223 LFRHKDVVELRDLEEEDPKEIEASKHDLSYIA-LD---------------GDIGCMVNGA 266
Query: 179 GASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G+ + ++ E K IL
Sbjct: 267 GLAMATMDTINHFGGNP--ANFLDAGGSATREKVTEAFKIIL 306
>sp|Q4L5U8|SUCC_STAHJ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sucC PE=3 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 9 DQDEEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQV 61
D +E YV R +D T++ +GG +I +V AK K I PV G++ Q
Sbjct: 103 DIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPV--VGLSPYQ- 159
Query: 62 TSKLLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDS 119
++ N+ K+++ AKF+ +LYN+++ + +EINPLV T + +L L AK+
Sbjct: 160 ARRIAFNINIPKESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGEG-EVLALDAKI-- 216
Query: 120 TADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK--LTILNKKGRIWTMVAG 177
N D F E + + D K + K L+ + G I MV G
Sbjct: 217 -----------NFDDNALFRHKDIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNG 265
Query: 178 GGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G ++++ E K IL
Sbjct: 266 AGLAMATMDTINHFGGNP--ANFLDVGGGATKEKVTEAFKIIL 306
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 11 DEEAYVCIY--SSRNSDTILFHHQGGVDIGDVDAK------ALKLEIPVGQTGVTEEQVT 62
D+E YV I S++ I+ GG++I +V A +E +G ++
Sbjct: 105 DKEFYVAITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITQTIEPFIGLRSYHARELA 164
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
KL + KA A T LY +Y+ L + +EINPLV+T D I ILD + D
Sbjct: 165 LKLGLPKNLLNKA--ASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNG 222
Query: 122 DFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGAS 181
F +P D P + ++++K L + G I MV G G +
Sbjct: 223 LF---------RHPEIMEMDD-PTQISPLEVEAK---KFNLNYIKLDGNIACMVNGAGLA 269
Query: 182 VVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
+ DTI GG E AN+ + G+ + Q K ILS
Sbjct: 270 MSTMDTIKLAGG--EPANFLDVGGSANATQIANAFKIILS 307
>sp|B4S612|SUCC_PROA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris
aestuarii (strain DSM 271 / SK 413) GN=sucC PE=3 SV=1
Length = 390
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 11 DEEAYVCIYSSR--NSDTILFHHQGGVDIGDV----DAKALKLEI-PV-GQTGVTEEQVT 62
++E YV I R + + ++ +GG++I V K LK++I P+ G G Q
Sbjct: 109 EKEFYVGITLDRATSQNVLMVSTEGGMEIETVAEETPEKLLKIQIHPLQGLQGFQARQ-- 166
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
+ + + K KF+TALY Y + + EINPLV+T + + LD DS A
Sbjct: 167 AAFFLGLEGDKFKNTVKFITALYKAYTAIDASIAEINPLVITKEGKVMALDAKINFDSNA 226
Query: 122 DFICR--AQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGG 179
F + + +I PF +A SKS L + G + MV G G
Sbjct: 227 LFRHKDFLELRDISEEDPFEVEA-----------SKS----NLNYVRLDGNVGCMVNGAG 271
Query: 180 ASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ D I GG AN+ + G+ S + E K I+S
Sbjct: 272 LAMATMDMIQLAGGKP--ANFLDVGGSASPETVEEGFKIIMS 311
>sp|A7Z4M9|SUCC_BACA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1
Length = 385
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKALK------LEIPVGQTGVTEEQ 60
D +E YV + R + I+ +GG +I +V K + ++ VG G +
Sbjct: 103 DIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQARE 162
Query: 61 VTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
+ IN+ AKF+ LY +V + EINPLVVT D ++ L AKL+
Sbjct: 163 IA--FAINIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDG-NVMALDAKLNFD 219
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGA 180
++ + R Q ++Y D P+E + D L+ ++ G I MV G G
Sbjct: 220 SNALYR-QKDIMEYRDLDEED--PKEIEASKYD--------LSYISLDGNIGCMVNGAGL 268
Query: 181 SVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ D I GG E AN+ + G + ++ E K ILS
Sbjct: 269 AMSTMDIIKHYGG--EPANFLDVGGGATAEKVTEAFKIILS 307
>sp|Q3IGW5|SUCC_PSEHT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=sucC PE=3 SV=1
Length = 388
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 6 STFDQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKALKL----EIP--VGQTGVT 57
S D E Y+ R S ++F +GGV+I V + +L EI VG
Sbjct: 100 SCTDIANELYLGAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQ 159
Query: 58 EEQVTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAK 116
++ KL +N P + K L M+ + F LEINPLV+T++ ++ LD
Sbjct: 160 ARELGFKLGLN--PVQMKQFVKIFMGLGKMFTDFDFALLEINPLVITDEGNLHCLDGKIG 217
Query: 117 LDSTADFICRAQWGNIDYPPPFGRDAY-PEEAYIADLDSKSGASLKLTILNKKGRIWTMV 175
+D GN Y P R+ + P + D AS +L + G + MV
Sbjct: 218 ID-----------GNALYRQPKIREFHDPSQ---EDSREAHAASFELNYVALDGNVGCMV 263
Query: 176 AGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D + GG AN+ + G ++++ E K ILS
Sbjct: 264 NGAGLAMGTMDIVNLHGGKP--ANFLDVGGGATKERVSEAFKIILS 307
>sp|B4SEH6|SUCC_PELPB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=sucC
PE=3 SV=1
Length = 392
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 11 DEEAYVCIYSSRNS--DTILFHHQGGVDIGDV----DAKALKLEI-PV-GQTGVTEEQVT 62
++E YV I R++ + ++ +GG++I V + LK++I P+ G G +
Sbjct: 109 EKEFYVGITLDRSTSKNVLMVSTEGGMEIEKVAEETPERLLKIQIDPLFGMQGFQAREAA 168
Query: 63 SKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTA 121
L + + A+ F+TALYN Y+++ EINPLVVT + + LD D A
Sbjct: 169 FFLGLKGEQFRNAV--NFITALYNAYISIDAALAEINPLVVTKEGKVLALDAKINFDDNA 226
Query: 122 DFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGAS 181
F + ++ + RD E+ + + SKS L + G + MV G G +
Sbjct: 227 LFRHK-EFHEL-------RDTNEEDPFEVEA-SKS----NLNYVRLDGNVGCMVNGAGLA 273
Query: 182 VVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
+ D I GG AN+ + G+ S Q E K ILS
Sbjct: 274 MGTMDMIQLAGGKP--ANFLDVGGSASPQTVEEGFKIILS 311
>sp|Q2SD35|SUCC_HAHCH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hahella
chejuensis (strain KCTC 2396) GN=sucC PE=3 SV=1
Length = 388
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 6 STFDQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDV----DAKALKLEIP--VGQTGVT 57
S D D+E Y+ R + I+F +GGV+I V K LK I VG
Sbjct: 100 SCTDIDQELYLGAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAVIDPLVGAQPYQ 159
Query: 58 EEQVTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTN-DTIYILDLAAK 116
++ L +N K+ K L ++ +L LE+NPLV+T ++ LD
Sbjct: 160 ARELAFALGLNSDQVKQ--FTKIFLGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVV 217
Query: 117 LDSTADFICRAQWGNIDYPPPFGRDAY------PEEAYIADLDSKSGASLKLTILNKKGR 170
+D GN Y P RD + P EA+ A +L + +G
Sbjct: 218 VD-----------GNALYRQPRIRDMHDPSQEDPREAH--------AAKWELNYVALEGN 258
Query: 171 IWTMVAGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
I MV G G ++ D + GGA AN+ + G ++++ E K ILS
Sbjct: 259 IGCMVNGAGLAMGTMDIVKLHGGAP--ANFLDVGGGATKERVTEAFKIILS 307
>sp|P80886|SUCC_BACSU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis
(strain 168) GN=sucC PE=1 SV=2
Length = 385
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKALK------LEIPVGQTGVTEEQ 60
D +E Y+ + R + I+ +GG +I +V K + ++ VG G +
Sbjct: 103 DIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQARE 162
Query: 61 VTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
+ IN+ AKF+ LY +V + EINPLVVT D ++ L AKL+
Sbjct: 163 IA--FAINIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDG-NVMALDAKLNFD 219
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGA 180
++ + R Q ++Y D P+E + D L+ ++ G I MV G G
Sbjct: 220 SNALYR-QKDIMEYRDLDEED--PKEIEASKYD--------LSYISLDGNIGCMVNGAGL 268
Query: 181 SVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
++ D I GG E AN+ + G + ++ E K ILS
Sbjct: 269 AMSTMDIIKHYGG--EPANFLDVGGGATAEKVTEAFKIILS 307
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 9 DQDEEAYVCIYSSRNSD--TILFHHQGGVDIGDVDAKA----LKLEI-PVGQTGVTEEQV 61
D +E YV R +D T++ +GG +I +V AK K I PV G+ Q
Sbjct: 103 DIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPV--VGLAPYQ- 159
Query: 62 TSKLLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDS 119
++ N+ K+++ AKF+ +LYN+++ + +EINPLV T + +L L AK+
Sbjct: 160 ARRIAFNINIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEG-EVLALDAKV-- 216
Query: 120 TADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK--LTILNKKGRIWTMVAG 177
N D F E + + D K + K L+ + G I MV G
Sbjct: 217 -----------NFDDNALFKHKDIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNG 265
Query: 178 GGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTIL 220
G ++ DTI GG AN+ + G ++++ E K IL
Sbjct: 266 AGLAMATMDTINHFGGNP--ANFLDVGGGATKEKVTEAFKIIL 306
>sp|A4IM83|SUCC_GEOTN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1
Length = 386
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKA---LKLEIPVGQTGVTEEQVTS 63
D +E Y+ + R + ++ +GG +I +V AK + E G+ Q
Sbjct: 103 DIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQ-AR 161
Query: 64 KLLINVAPAKKAM--VAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDSTA 121
+L N+ KK + KF+ LY ++V+ + EINPLVVT D ++ L AKL+ +
Sbjct: 162 RLAFNINIPKKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDG-KVMALDAKLNFDS 220
Query: 122 DFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK-----LTILNKKGRIWTMVA 176
+ + R +P+ DLD + ++ L + G I MV
Sbjct: 221 NALYR----------------HPDIMEYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVN 264
Query: 177 GGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D I GG E AN+ + G SE++ E K ILS
Sbjct: 265 GAGLAMATMDIIKYYGG--EPANFLDVGGGASEEKVTEAFKIILS 307
>sp|P53594|MTKA_METEA Malate--CoA ligase subunit beta OS=Methylobacterium extorquens
(strain ATCC 14718 / DSM 1338 / AM1) GN=mtkA PE=3 SV=2
Length = 390
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 26/203 (12%)
Query: 27 ILFHHQGGVDIGDVDAK------ALKLEIPVGQTGVTEEQVTSKLLINVAPAKKAMVAKF 80
++ +GG+DI ++ AK + +E VG ++ +L +N+ A+ K
Sbjct: 123 VIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLNIKQVSAAV--KT 180
Query: 81 VTALYNMYVNLYFTYLEINPLVVT-NDTIYILDLAAKLDSTADFICRAQWGNI-DYPPPF 138
+ Y + + T LEINPLVVT +D + LD D A F R NI D P
Sbjct: 181 IMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRR----NIADMHDPS 236
Query: 139 GRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASVVYSDTICDLGGASELA 198
D P EA A+ + L+ + +G I +V G G ++ D I GG E A
Sbjct: 237 QGD--PREAQAAEHN--------LSYIGLEGEIGCIVNGAGLAMATMDMIKHAGG--EPA 284
Query: 199 NYGEYSGAPSEQQTYEYAKTILS 221
N+ + G S + + +LS
Sbjct: 285 NFLDVGGGASPDRVATAFRLVLS 307
>sp|Q5L0N7|SUCC_GEOKA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
kaustophilus (strain HTA426) GN=sucC PE=3 SV=1
Length = 386
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 9 DQDEEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAKALK------LEIPVGQTGVTEEQ 60
D +E Y+ + R + ++ +GG +I +V AK + ++ VG +
Sbjct: 103 DIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARR 162
Query: 61 VTSKLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTNDTIYILDLAAKLDST 120
+ IN+ KF+ LY ++V+ + EINPLVVT D ++ L AKL+
Sbjct: 163 LAFN--INIPKHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDG-KVMALDAKLNFD 219
Query: 121 ADFICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLK-----LTILNKKGRIWTMV 175
++ + R +P+ DLD + ++ L + G I MV
Sbjct: 220 SNALYR----------------HPDILEYRDLDEEDPKEVEASKYDLNYIALDGNIGCMV 263
Query: 176 AGGGASVVYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
G G ++ D I GG E AN+ + G SE++ E K ILS
Sbjct: 264 NGAGLAMATMDIIKYYGG--EPANFLDVGGGASEEKVREAFKIILS 307
>sp|Q8P676|SUCC_XANCP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=sucC PE=3 SV=1
Length = 389
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 12 EEAYVCIYSSRNSDTILF--HHQGGVDIGDVDAK------ALKLEIPVGQTGVTEEQVTS 63
+E Y+ I R + TI + +GGV+I V A+ +L ++ G G
Sbjct: 106 KELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGF 165
Query: 64 KLLINVAPAKKAMVAKFVTALYNMYVNLYFTYLEINPLVVTND-TIYILDLAAKLDSTAD 122
KL +N A + A + LY ++ + +EINPL + +D +Y LD D A
Sbjct: 166 KLGLNAKQAGQ--FASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAA 223
Query: 123 FICRAQWGNIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWTMVAGGGASV 182
F +A RD E D + + L + + G I MV G G ++
Sbjct: 224 FRQKALVAM--------RDKTQE-----DETEVTASELDINYVTMDGNIGCMVNGAGLAM 270
Query: 183 VYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILS 221
D I GG E AN+ + G ++Q+ E K ILS
Sbjct: 271 ATMDVIKLNGG--EPANFLDVGGGANKQRVIEAFKLILS 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,401,145
Number of Sequences: 539616
Number of extensions: 3622694
Number of successful extensions: 8198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 7938
Number of HSP's gapped (non-prelim): 542
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)