BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1695
(202 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91076772|ref|XP_973777.1| PREDICTED: similar to Torsin family protein [Tribolium castaneum]
gi|270001920|gb|EEZ98367.1| hypothetical protein TcasGA2_TC000824 [Tribolium castaneum]
Length = 341
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 118/187 (63%), Gaps = 4/187 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C++ I + + LE+ LK+H++GQ L + + AL++H+ + + KAL +S HG P
Sbjct: 46 ECCSEHSIHA-DFDGLEDALKKHIYGQHLVLDIVTNALRSHWADNHKPQKALTLSFHGWP 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G+GKNYVT FIV +++K Y K S+FVH F R+HF +EN V Y+ L WI N T
Sbjct: 105 GSGKNYVTKFIVENMYK-YGSK--SKFVHHFIGRMHFSSENKVKEYQENLQEWIKGNTTN 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C + +FIFDEVDK P +L++I P ID+ + + +++ +F+FLSN+G I LE+
Sbjct: 162 CGKQLFIFDEVDKMPSRVLNIIKPMIDYRDDVDGVDYRDCVFIFLSNTGADLINEHVLEM 221
Query: 181 RKSECIE 187
K + ++
Sbjct: 222 WKEDGVK 228
>gi|443708149|gb|ELU03404.1| hypothetical protein CAPTEDRAFT_168452 [Capitella teleta]
Length = 348
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 6/173 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E+C D +++ + + L+ L +HGQ L I ++ A++ H R+ +KAL +S HG
Sbjct: 63 ESCDDNWLKK-DTQGLKNDLSTRLHGQHLVIENVVKAIQAH--KRHLPSKALVMSFHGWT 119
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNYV FI + Y S+FVH F + HFP+ + + Y+ Q+ +WI N+TA
Sbjct: 120 GCGKNYVGRFIAEHL---YHQGMKSKFVHLFVATHHFPHASRIETYKDQVRDWIKGNITA 176
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C +++FIFDEVDK P GLLD+I+PFIDHH N + ++++IFLFLSN+GG I
Sbjct: 177 CPQSMFIFDEVDKMPPGLLDIILPFIDHHEEINGVDYRHSIFLFLSNTGGNLI 229
>gi|348570402|ref|XP_003470986.1| PREDICTED: torsin-1A-like [Cavia porcellus]
Length = 332
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C + +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQR--RSLSREALQKDLDNRLFGQHLAKKVILNAVTGFLSNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK P GL+D I PF+D++ V +++S+Q IF+FLSN+G IM+ L+
Sbjct: 163 CARSIFIFDEMDKMPAGLIDAIKPFLDYYDVVDEVSYQRAIFIFLSNAGAERIMDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|324518625|gb|ADY47157.1| Torsin-1B [Ascaris suum]
Length = 296
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L ++Q ++GQ LA + AL++HF N + KAL IS HG G GKNY+T I ++
Sbjct: 6 LRRTMRQRLYGQHLAQETVLPALQSHFNNE-NPKKALVISFHGWTGCGKNYLTSMIAENM 64
Query: 76 FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
FK KG S +VH F S +HF N N ++ Y+ L WI NV+ C+R++FIFDEVDK
Sbjct: 65 FK----KGMKSEYVHLFISTLHFANPNEIATYQQNLREWIHGNVSLCERSLFIFDEVDKM 120
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
P ++D I PFIDH+ + ++ +IF+FLSNSGG EI L
Sbjct: 121 PPKVMDAIKPFIDHYDNLEGVDYRKSIFIFLSNSGGNEITEKTL 164
>gi|194033707|ref|XP_001929298.1| PREDICTED: torsin-1B-like [Sus scrofa]
Length = 336
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N + +L++ + GQ LA + AL F+N + KAL +SLHG
Sbjct: 55 ECCREE--QPLNASAFKLELEERLFGQHLATEVLLKALTG-FRNNKNPKKALTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ + KG S FVH F S +HFP+E HV LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHR----KGLKSNFVHLFVSTLHFPHEQHVKLYQDQLQRWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK GL+D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGLIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 LRKS 183
++
Sbjct: 228 FWRA 231
>gi|410979366|ref|XP_003996056.1| PREDICTED: torsin-1B [Felis catus]
Length = 327
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 115/193 (59%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ +L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 46 ECCREE--QRLNASALKLELEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 102
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E H+ LY+ QL WI NV+
Sbjct: 103 GTGKNFVSQIVAENL----HSKGLKSNFVHLFVSTLHFPHEQHIKLYQDQLQGWIRGNVS 158
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 159 ACASSVFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFMFLSNAGGDLITKTALD 218
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 219 FWRAGRKREDIQL 231
>gi|297480795|ref|XP_002691721.1| PREDICTED: torsin-1B [Bos taurus]
gi|296482155|tpg|DAA24270.1| TPA: torsin family 1, member B (torsin B)-like [Bos taurus]
Length = 309
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 10/192 (5%)
Query: 2 ACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPG 61
+C K R L++ L++ + GQ LA I AL F+N + K L +SLHG G
Sbjct: 27 SCDPKGCALPRSRALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAG 85
Query: 62 TGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
TGKN+V+ + ++ KG S FVH F S +HFP+E H+ LY+ QL WI NV+A
Sbjct: 86 TGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQHIKLYQDQLQRWIRGNVSA 141
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 142 CAGSVFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDF 201
Query: 181 ----RKSECIEF 188
RK E I+
Sbjct: 202 WRAGRKREDIQL 213
>gi|344271670|ref|XP_003407660.1| PREDICTED: torsin-1B-like [Loxodonta africana]
Length = 336
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVT 68
Q N L+ L++ + GQ LA I AL F+N + KAL +SLHG GTGKN+V+
Sbjct: 61 QPLNASALKLDLEEKLFGQHLATEVILKALIG-FKNNKNPKKALTLSLHGWAGTGKNFVS 119
Query: 69 DFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ +++ KG S FVH F S +HFP+E + LY+ QL NWI NV+AC ++FI
Sbjct: 120 QIVAENLYS----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQNWIRGNVSACAGSVFI 175
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
FDE+DK GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ ++
Sbjct: 176 FDEMDKLHPGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKMALDFWRA 231
>gi|291244635|ref|XP_002742201.1| PREDICTED: torsin family 1, member B (torsin B)-like [Saccoglossus
kowalevskii]
Length = 370
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 110/179 (61%), Gaps = 5/179 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT+K+I +N+ L L+Q V+GQ L + + ++ H N + TK+L +S HG
Sbjct: 65 ECCTEKYI-PANITSLSMDLQQKVYGQHLVQTVVLNTIQGHVTNP-NPTKSLVLSFHGWT 122
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKN+V+ I +I+ D S++VH F + +HFP++ + Y+ QL +WI NVT
Sbjct: 123 GGGKNFVSRIIADNIYMNGMD---SKYVHLFVATLHFPHKKDIDHYKDQLISWIKGNVTQ 179
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C R +FIFDE+DK GL+DV+ PF+DH+ + + ++ IF+FLSN+ G +I LE
Sbjct: 180 CQRQLFIFDEMDKMHPGLIDVLKPFLDHYPEIDGVDYRKNIFIFLSNTAGNDITVKTLE 238
>gi|338720334|ref|XP_001499689.2| PREDICTED: torsin-1B-like [Equus caballus]
Length = 343
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--QPLNASALKLDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S+FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENL----HSKGLKSKFVHLFVSTLHFPHEQQIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACASSLFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E IE
Sbjct: 228 FWRAGRKREDIEL 240
>gi|126297832|ref|XP_001369279.1| PREDICTED: torsin-1B-like [Monodelphis domestica]
Length = 338
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 57 ECCREE--QPLNASALKLDLEEKLFGQHLAREVILKALTG-FRNNKNPKKPLTLSLHGWA 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ + ++ + + S FVH F S +HFP+E + LY+ QL WI NV++
Sbjct: 114 GTGKNFVSQIVAKNL---HPEGLKSNFVHLFVSTLHFPHEQKIKLYQEQLQKWIRGNVSS 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDE+DK +GL+D I PF+D++ + IS++ IF+FLSN+GG I L+
Sbjct: 171 CARSVFIFDEMDKLHRGLIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITRMALDF 230
Query: 181 RKS 183
K+
Sbjct: 231 WKA 233
>gi|260800801|ref|XP_002595285.1| hypothetical protein BRAFLDRAFT_128102 [Branchiostoma floridae]
gi|229280530|gb|EEN51297.1| hypothetical protein BRAFLDRAFT_128102 [Branchiostoma floridae]
Length = 348
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 8/190 (4%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D N+ L L+ +HGQ L + + A+K H +N+ + +KAL +S HG G
Sbjct: 55 CCDNNWFIPNITGLRTSLQDKLHGQHLVVDTVAKAVKGHIRNK-NPSKALVLSFHGWTGG 113
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKN+V+ I ++F + SR VH F + +HFP+++ V Y+ QL WI N + C
Sbjct: 114 GKNFVSKMIAENLFVKGM---MSRHVHLFVATLHFPHKDRVETYKDQLREWIKGNTSDCP 170
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT----FL 178
+IF+FDE+DK P+GLLD + P+IDH+ N + ++ TIF+ LSN+ G I +
Sbjct: 171 HSIFVFDEMDKLPEGLLDAVKPYIDHYTEINGVDYRKTIFILLSNTAGNTITQRTYQHWQ 230
Query: 179 ELRKSECIEF 188
E RK E I
Sbjct: 231 EGRKREDISL 240
>gi|354503908|ref|XP_003514022.1| PREDICTED: torsin-1A [Cricetulus griseus]
gi|344258465|gb|EGW14569.1| Torsin-1A [Cricetulus griseus]
Length = 333
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+A
Sbjct: 106 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
KS
Sbjct: 223 WKS 225
>gi|348524336|ref|XP_003449679.1| PREDICTED: torsin-1B-like [Oreochromis niloticus]
Length = 337
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 109/182 (59%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++I S N L L + GQ +A I A+ N + K L +SLHG
Sbjct: 54 ECCRPEWI-SFNKTGLRNDLDTKLFGQHIASRIILKAVSGFMSNE-NPKKPLVLSLHGWT 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I+K D S FVH F S +HFP+++ + Y+ QL WI NVT
Sbjct: 112 GTGKNFVSKLIAENIYKEGMD---SSFVHVFTSTLHFPHQSQKATYKSQLQQWIKGNVTN 168
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C+R++FIFDE+DK GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+
Sbjct: 169 CERSMFIFDEMDKMHPGLIDSIKPYLDYYDKLDGVSYRKSIFIFLSNAGGESIIQTVLDF 228
Query: 181 RK 182
K
Sbjct: 229 WK 230
>gi|427794909|gb|JAA62906.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 364
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + NV+ L+ LK +HGQ L I ALK+HFQN KAL +S HG
Sbjct: 76 ECCAAPWV-TDNVKGLDNMLKFRLHGQPLVHRAIVRALKDHFQNPAPK-KALVLSFHGWT 133
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNY + I ++ YK+ S++V + S HFP+++ V YR L I + V
Sbjct: 134 GGGKNYASSMIAEAL---YKEGMNSKYVSLYVSTKHFPHQDEVPKYRKTLQKEIEAKVKE 190
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDE+DK P GL+D+I P++D H +++ ++ +IF+FLSN+ G I L+
Sbjct: 191 CGRSLFIFDEIDKMPNGLIDIIKPYLDFHEKLDEVDYRKSIFIFLSNTAGDVIARATLDA 250
Query: 181 RK 182
K
Sbjct: 251 WK 252
>gi|13878825|sp|Q9ERA9.1|TOR1A_CRICR RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A
gi|10798496|emb|CAC12784.1| torsinA protein [Cricetus cricetus]
Length = 273
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 2 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWT 58
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+A
Sbjct: 59 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVSA 115
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 116 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDF 175
Query: 181 RKS 183
KS
Sbjct: 176 WKS 178
>gi|312069589|ref|XP_003137752.1| hypothetical protein LOAG_02166 [Loa loa]
gi|307767077|gb|EFO26311.1| hypothetical protein LOAG_02166 [Loa loa]
Length = 354
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D + + L+ L+ ++GQ LA I A+ H++N + KAL +S HG G
Sbjct: 53 CCDSYWVREDYTGLQHSLRTRLYGQHLAKETIITAVIAHWKNP-NPKKALVMSFHGWTGC 111
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKNY++ I ++ Y+ S +VH + S +HF N + LY++QL +WI NV+ C+
Sbjct: 112 GKNYLSSIITENL---YRKGMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSKCE 168
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
R++F+FDEVDK P ++D + PFIDH+ + F+ +IF+FLSNSG EI L+
Sbjct: 169 RSLFVFDEVDKMPAKVIDAVKPFIDHYEYLEGVDFRKSIFIFLSNSGSNEITQKALQ 225
>gi|71897317|ref|NP_001025858.1| torsin-1A precursor [Gallus gallus]
gi|53135169|emb|CAG32402.1| hypothetical protein RCJMB04_24j12 [Gallus gallus]
Length = 344
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 4/169 (2%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L+E L + + GQ L + A++ N K LA+SLHG GTGKN+V+ I S
Sbjct: 72 ALQESLDRRLFGQHLVSKVVVRAVRGFLSNA-QAKKPLALSLHGWTGTGKNFVSKIIAES 130
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
I+KR S +VH+F + +HFP+ + ++LY+ QL +WI NV+ C R+IFIFDE+DK
Sbjct: 131 IYKR---GLKSNYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSICPRSIFIFDEMDKM 187
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ + + +S++ IF+FLSN+G +I L+ ++
Sbjct: 188 HAGLIDAIKPFLDYYELLDGVSYRQAIFIFLSNAGAEKITEVALDFWRN 236
>gi|170576026|ref|XP_001893475.1| Torsin family protein [Brugia malayi]
gi|158600510|gb|EDP37690.1| Torsin family protein [Brugia malayi]
Length = 354
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +I+ + + L+ + ++GQ LA I A H++N KAL +S HG
Sbjct: 52 ECCDSSWIRG-DYKGLQHSMHTRLYGQHLAKETIITAAIAHWKNP-SPKKALVMSFHGWT 109
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNY++ I+ ++ YK S +VH + S +HF N + LY++QL +WI NV+
Sbjct: 110 GCGKNYLSSMIIENL---YKKGMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSK 166
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C+R++F+FDEVDK P ++D I PFIDH+ + F+ +IF+FLSNSG EI L+
Sbjct: 167 CERSLFVFDEVDKMPAKVIDAIKPFIDHYEYLEDVDFRKSIFIFLSNSGSNEIAQKALQ 225
>gi|417399144|gb|JAA46602.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 335
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ QL++ + GQ LA I AL F+N K L +SLHG
Sbjct: 54 ECCGEE--KPLNASALKLQLEEKLFGQHLATEVILKALTG-FKNNKEPKKPLTLSLHGWA 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E+ LY+ QL WI NV+
Sbjct: 111 GTGKNFVSQIVAENLHA----KGLKSNFVHLFVSTLHFPHEHQTKLYQDQLQEWIRGNVS 166
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ +S++ IF+FLSN+GG I T LE
Sbjct: 167 ACASSVFIFDEMDKLHPGIIDAIKPFLDYYEQVGGVSYRKAIFIFLSNAGGDLITETALE 226
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 227 FWRAGRKREDIQL 239
>gi|198413583|ref|XP_002125069.1| PREDICTED: similar to Torsin family protein [Ciona intestinalis]
Length = 343
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C DK N+ L+ L+ ++GQ L + A+K+H N + +KAL +S HG G+
Sbjct: 59 CCDKHNIKPNMTGLQHDLRTKLYGQHLVEKTVYRAVKHHLANP-NPSKALVMSFHGWTGS 117
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKNYV IV +++++ + S FVH FN+ + F ++ +V +Y+ QL +W+ NV+ C
Sbjct: 118 GKNYVAQMIVKNLYRKNLE---SSFVHVFNAEVDFKHQQNVGVYKDQLQSWLHGNVSKCG 174
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
R+IFIFDE+D P GL+D + P++ + V + + ++ TIF+FLSN+GG EI
Sbjct: 175 RSIFIFDEIDHMPVGLVDALKPYMSNEPVVHGVDYRKTIFIFLSNTGGQEI 225
>gi|426226111|ref|XP_004007197.1| PREDICTED: torsin-1B [Ovis aries]
Length = 301
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 109/179 (60%), Gaps = 10/179 (5%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L++ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 32 ALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 90
Query: 75 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ KG S FVH F S +HFP+E H+ LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 91 LHP----KGLKSNFVHLFVSTLHFPHEQHIKLYQDQLQRWIRGNVSACAGSVFIFDEMDK 146
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECIEF 188
G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ RK E I+
Sbjct: 147 LHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQL 205
>gi|85861170|ref|NP_001034286.1| torsin-1B precursor [Rattus norvegicus]
gi|85056989|gb|AAI11705.1| Torsin family 1, member B [Rattus norvegicus]
gi|149039067|gb|EDL93287.1| rCG45853 [Rattus norvegicus]
Length = 336
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ +
Sbjct: 64 NTSALKLDLEEKLFGQHLATEVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIV 122
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLYP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACGSSVFIFDE 178
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ RK E I
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEI 238
Query: 187 EF 188
+
Sbjct: 239 QL 240
>gi|51491900|ref|NP_695215.2| torsin-1A precursor [Rattus norvegicus]
gi|51260628|gb|AAH78714.1| Dystonia 1 [Rattus norvegicus]
gi|149039066|gb|EDL93286.1| dystonia 1 [Rattus norvegicus]
Length = 333
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKRVILNAVSGFLSNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 106 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQMWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|359320466|ref|XP_003639349.1| PREDICTED: torsin-1B-like [Canis lupus familiaris]
Length = 336
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ +L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCLEE--QRLNASALKLELEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENL----HSKGLKSNFVHLFVSTLHFPHEQQIKLYQDQLQAWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +SF+ IF+FLSN+GG I L+
Sbjct: 168 ACASSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSFRKAIFIFLSNAGGDLITKIALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>gi|395844401|ref|XP_003794950.1| PREDICTED: torsin-1B [Otolemur garnettii]
Length = 338
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ L++ + GQ +A I AL F+N K L +SLHG
Sbjct: 57 ECCREE--QPLNASALKLDLEEKLFGQHVATEVILKALTG-FRNNKSPKKPLTLSLHGWA 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ + KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 114 GTGKNFVSQIVAENLHR----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 169
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 170 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 229
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 230 FWRAGRKREDIQL 242
>gi|31559990|ref|NP_598434.2| torsin-1B precursor [Mus musculus]
gi|342187060|sp|Q9ER41.2|TOR1B_MOUSE RecName: Full=Torsin-1B; AltName: Full=Torsin family 1 member B;
Flags: Precursor
gi|17391071|gb|AAH18456.1| Torsin family 1, member B [Mus musculus]
gi|74204705|dbj|BAE35421.1| unnamed protein product [Mus musculus]
gi|74207861|dbj|BAE29062.1| unnamed protein product [Mus musculus]
gi|148676549|gb|EDL08496.1| torsin family 1, member B, isoform CRA_b [Mus musculus]
Length = 336
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ +
Sbjct: 64 NTSALKLDLEEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIV 122
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLYP----KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDE 178
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ RK E I
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRKREEI 238
Query: 187 EF 188
+
Sbjct: 239 QL 240
>gi|301758844|ref|XP_002915283.1| PREDICTED: torsin-1B-like [Ailuropoda melanoleuca]
Length = 357
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +K Q N L+ +L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 76 ECCREK--QPLNASALKLELEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 132
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + + KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 133 GTGKNFVSQIVAEHL----HSKGLRSNFVHLFVSTLHFPHEQQIKLYQDQLQGWIRGNVS 188
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I L+
Sbjct: 189 ACASSVFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKIALD 248
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 249 FWRAGRKREDIQL 261
>gi|149410292|ref|XP_001508626.1| PREDICTED: torsin-1A-like [Ornithorhynchus anatinus]
Length = 335
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K + L + L + + GQ LA I A+ N K L +SLHG
Sbjct: 51 ECCAPK--RGLGREALRKDLDRKLFGQHLAKKVILNAVSGFVSNP-KPKKPLTLSLHGWT 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y S +VH+F + +HFP+ ++ Y+ QL WI NV+A
Sbjct: 108 GTGKNFASKIIAENI---YDGGPKSDYVHQFVATLHFPHAQNLDQYKDQLQLWIRGNVSA 164
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK P GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 165 CSRSIFIFDEMDKMPSGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 224
Query: 181 RKS 183
KS
Sbjct: 225 WKS 227
>gi|402589306|gb|EJW83238.1| torsin-1B, partial [Wuchereria bancrofti]
Length = 309
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D + L+ + ++GQ LA I A H++N KAL +S HG G
Sbjct: 53 CCDSSWVRGDYEGLQHSMHTRLYGQHLAKETIITAAIAHWKNP-SPKKALVMSFHGWTGC 111
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKNY++ IV ++ YK S +VH + S +HF N + LY++QL +WI NV+ C+
Sbjct: 112 GKNYLSSMIVENL---YKKGMKSDYVHVYVSTLHFSNYLEIPLYQVQLRSWIQGNVSKCE 168
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
R++F+FDEVDK P ++D I PFIDH+ + F+ +IF+FLSNSG EI L+
Sbjct: 169 RSLFVFDEVDKMPAKVIDAIKPFIDHYEYLEDVDFRKSIFIFLSNSGSNEIAQKALQ 225
>gi|432884753|ref|XP_004074571.1| PREDICTED: torsin-1B-like isoform 1 [Oryzias latipes]
Length = 335
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +++ + N L+ L+ + GQ LA I A+ N + K L +SLHG
Sbjct: 48 ETCDSRWL-TYNSTGLKMDLENKLFGQHLASRIILKAVSGFMSND-NPKKPLVLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I ++ YK+ S+FVH F S +HFP+ + +S Y+ QL WI NV+
Sbjct: 106 GTGKNFVSQLIAENV---YKEGMHSKFVHVFTSTLHFPHPSLLSSYKSQLQQWIKGNVSN 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C+R++FIFDE+DK GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+
Sbjct: 163 CERSMFIFDEMDKMHPGLIDSIKPYLDYYEKLDGVSYRKSIFIFLSNAGGESIVETALDF 222
Query: 181 RK 182
+
Sbjct: 223 WR 224
>gi|10798612|emb|CAC12814.1| torsinB protein [Mus musculus]
Length = 336
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ +
Sbjct: 64 NTSALKLDLEEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIV 122
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLYP----KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDE 178
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ ++
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRA 231
>gi|332230221|ref|XP_003264285.1| PREDICTED: LOW QUALITY PROTEIN: torsin-1B [Nomascus leucogenys]
Length = 336
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI SNV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRSNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>gi|354503914|ref|XP_003514025.1| PREDICTED: torsin-1B-like [Cricetulus griseus]
Length = 493
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L+ L++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+V+ + +
Sbjct: 224 ALKLDLEKKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFVSQIVAEN 282
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
+ Y S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 283 L---YPKGLKSNFVHLFVSTLHFPHEQQIKLYQNQLQKWIRGNVSACGLSVFIFDEMDKL 339
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECIEF 188
G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ RK E I+
Sbjct: 340 HPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEIQL 397
>gi|395506285|ref|XP_003757465.1| PREDICTED: torsin-1B [Sarcophilus harrisii]
Length = 560
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 291 ALKLDLEEKLFGQHLAREVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 349
Query: 75 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ KG S FVH F S +HFP+E + LY+ QL WI NV+AC+R++FIFDE+DK
Sbjct: 350 LHP----KGLKSNFVHLFVSTLHFPHEQEIKLYQEQLQKWIRGNVSACERSVFIFDEMDK 405
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+GL+D I PF+D++ + IS++ IF+FLSN+GG I L+ ++
Sbjct: 406 LHRGLIDSIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITRMALDFWRA 455
>gi|154707898|ref|NP_001092528.1| torsin-1A precursor [Bos taurus]
gi|148745001|gb|AAI42388.1| TOR1A protein [Bos taurus]
gi|296482065|tpg|DAA24180.1| TPA: torsin A [Bos taurus]
Length = 333
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K +S + L++ L + GQ LA I AL N K L +SLHG
Sbjct: 49 ECCSPK--RSLSREALQKDLDSKLFGQHLAKKVILNALSGFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|383873079|ref|NP_001244677.1| torsin-1B precursor [Macaca mulatta]
gi|380787241|gb|AFE65496.1| torsin-1B precursor [Macaca mulatta]
gi|380787243|gb|AFE65497.1| torsin-1B precursor [Macaca mulatta]
gi|383414791|gb|AFH30609.1| torsin-1B precursor [Macaca mulatta]
gi|384946502|gb|AFI36856.1| torsin-1B precursor [Macaca mulatta]
Length = 336
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVILKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>gi|432884755|ref|XP_004074572.1| PREDICTED: torsin-1B-like isoform 2 [Oryzias latipes]
Length = 341
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++I N L+ L+ + GQ LA I A+ N + K L +SLHG
Sbjct: 54 ECCRPEWI-GFNKTGLKMDLENKLFGQHLASRIILKAVSGFMSND-NPKKPLVLSLHGWT 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I ++ YK+ S+FVH F S +HFP+ + +S Y+ QL WI NV+
Sbjct: 112 GTGKNFVSQLIAENV---YKEGMHSKFVHVFTSTLHFPHPSLLSSYKSQLQQWIKGNVSN 168
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C+R++FIFDE+DK GL+D I P++D++ + +S++ +IF+FLSN+GG I+ T L+
Sbjct: 169 CERSMFIFDEMDKMHPGLIDSIKPYLDYYEKLDGVSYRKSIFIFLSNAGGESIVETALDF 228
Query: 181 RK 182
+
Sbjct: 229 WR 230
>gi|402896316|ref|XP_003911249.1| PREDICTED: torsin-1B [Papio anubis]
Length = 336
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVILKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>gi|346465939|gb|AEO32814.1| hypothetical protein [Amblyomma maculatum]
Length = 385
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N++ L+ LK +HGQ L + ALK+HFQN KAL +S HG
Sbjct: 97 ECCAAPWV-TDNIKGLDNTLKFQLHGQPLVHRAVVRALKDHFQNP-SPKKALVLSFHGWT 154
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNY + I ++ YK+ S++V + + HFP+++ V YR L I + V
Sbjct: 155 GGGKNYASSMIAEAL---YKEGMNSKYVSLYVANKHFPHQDEVPKYRKTLQKEIEAKVKE 211
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L+
Sbjct: 212 CGRSLFIFDEIDKMPNGLIDIIKPYLDFHEKLDGVDYRKSIFIFLSNTAGDVIARATLDA 271
Query: 181 RK 182
K
Sbjct: 272 WK 273
>gi|348570412|ref|XP_003470991.1| PREDICTED: torsin-1B-like [Cavia porcellus]
Length = 338
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L++ LK+ + GQ LA I AL F+N + K L +SLHG GTGKN+ + +
Sbjct: 66 NASALKQDLKEKLFGQHLATEVILKALIG-FKNNKNPKKPLTLSLHGWAGTGKNFASQIM 124
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ R S FVH + S +HFP+E + LY+ QL WI NV+AC ++FIFDE+
Sbjct: 125 AENLHPR---GLKSNFVHLYVSTLHFPHEQKIKLYQDQLQKWIRGNVSACPTSVFIFDEM 181
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++
Sbjct: 182 DKLHPGVIDAIKPFLDYYEQVDGVSYRRAIFIFLSNAGGDLITRTALDFWRA 233
>gi|21450255|ref|NP_659133.1| torsin-1A precursor [Mus musculus]
gi|13878823|sp|Q9ER39.1|TOR1A_MOUSE RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|10798614|emb|CAC12785.1| torsinA protein [Mus musculus]
gi|17389254|gb|AAH17683.1| Torsin family 1, member A (torsin A) [Mus musculus]
gi|74183918|dbj|BAE35758.1| unnamed protein product [Mus musculus]
gi|148676550|gb|EDL08497.1| torsin family 1, member A (torsin A), isoform CRA_a [Mus musculus]
Length = 333
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 67
++S + L++ L + GQ LA I A+ N K L +SLHG GTGKN+
Sbjct: 54 MRSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWTGTGKNFA 112
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ I +I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+AC R+IFI
Sbjct: 113 SKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVSACARSIFI 169
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
FDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+ KS
Sbjct: 170 FDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDFWKS 225
>gi|395844399|ref|XP_003794949.1| PREDICTED: torsin-1A [Otolemur garnettii]
Length = 332
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVSG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFMFLSNAGAERITDVALDF 221
Query: 181 RKS 183
++
Sbjct: 222 WRN 224
>gi|198469973|ref|XP_001355173.2| GA15729 [Drosophila pseudoobscura pseudoobscura]
gi|198147122|gb|EAL32230.2| GA15729 [Drosophila pseudoobscura pseudoobscura]
Length = 313
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I +NV+ LE+ L++ V+GQ +A+ +I AL HF +R + K L +S HG P
Sbjct: 30 ECCDDRSI-PANVQALEKSLQEKVYGQHIAVPNIISALSAHFSSRVKSRKPLVLSFHGGP 88
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK++V D I ++ Y S +V KF R +F HV+ Y+ + + +T
Sbjct: 89 GTGKSFVADQIAQAL---YLQGSKSEYVAKFLGRANFAQAAHVATYKEHIDREVHKRLTN 145
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEV+K P G+ D + +D++ + ++I IF+FLSN+GGT I
Sbjct: 146 CPRSLFIFDEVEKMPSGVFDTLKALLDYNGLDDEIDNTQAIFIFLSNNGGTHI 198
>gi|403298505|ref|XP_003940058.1| PREDICTED: torsin-1A [Saimiri boliviensis boliviensis]
Length = 332
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|345805957|ref|XP_548417.3| PREDICTED: torsin-1A [Canis lupus familiaris]
Length = 332
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI SNV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRSNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|402896314|ref|XP_003911248.1| PREDICTED: torsin-1A [Papio anubis]
Length = 364
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|296191002|ref|XP_002743422.1| PREDICTED: torsin-1A [Callithrix jacchus]
Length = 364
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|296191000|ref|XP_002743421.1| PREDICTED: torsin-1B [Callithrix jacchus]
Length = 336
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 8/184 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 LRKS 183
++
Sbjct: 228 FWRA 231
>gi|62511202|sp|Q60HG2.1|TOR1A_MACFA RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|52782213|dbj|BAD51953.1| dystonia 1, torsion [Macaca fascicularis]
gi|380810294|gb|AFE77022.1| torsin-1A precursor [Macaca mulatta]
gi|383412207|gb|AFH29317.1| torsin-1A precursor [Macaca mulatta]
gi|384945660|gb|AFI36435.1| torsin-1A precursor [Macaca mulatta]
Length = 332
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|332230229|ref|XP_003264290.1| PREDICTED: torsin-1A [Nomascus leucogenys]
Length = 364
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|156349542|ref|XP_001622101.1| predicted protein [Nematostella vectensis]
gi|156208527|gb|EDO30001.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 5/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CTD +I S N+ L++ L + GQ L + A+K H N+ + KALA+S +G
Sbjct: 35 EHCTDGWI-SPNMTGLKKSLDNRLFGQHLVKDIVYKAVKGHVTNKSPH-KALALSFNGWT 92
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNYV+ I ++K+ D S +VH + FP+++ V Y+ QL WI+ NVT
Sbjct: 93 GCGKNYVSKIIAEHLYKKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTK 149
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDE+DK P+GL+ V+ PF+DH+ I F+ IFLFLSN+G I
Sbjct: 150 CGRSMFIFDEMDKMPEGLVGVLKPFLDHYPDVAGIDFRKCIFLFLSNTGAHSI 202
>gi|4557541|ref|NP_000104.1| torsin-1A precursor [Homo sapiens]
gi|13878817|sp|O14656.1|TOR1A_HUMAN RecName: Full=Torsin-1A; AltName: Full=Dystonia 1 protein; AltName:
Full=Torsin family 1 member A; Flags: Precursor
gi|2358279|gb|AAC51732.1| torsinA [Homo sapiens]
gi|189069439|dbj|BAG37105.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|12653777|gb|AAH00674.1| Torsin family 1, member A (torsin A) [Homo sapiens]
gi|30582701|gb|AAP35577.1| dystonia 1, torsion (autosomal dominant; torsin A) [Homo sapiens]
gi|60655223|gb|AAX32175.1| dystonia 1 [synthetic construct]
gi|60655225|gb|AAX32176.1| dystonia 1 [synthetic construct]
gi|123984475|gb|ABM83583.1| torsin family 1, member A (torsin A) [synthetic construct]
gi|123998443|gb|ABM86823.1| torsin family 1, member A (torsin A) [synthetic construct]
gi|307685153|dbj|BAJ20507.1| torsin family 1, member A [synthetic construct]
Length = 332
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|22651450|gb|AAL05259.1| torsinA [Rattus norvegicus]
Length = 333
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKRVILNAVSGFLSNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 106 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQMWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK L+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHASLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|30584107|gb|AAP36302.1| Homo sapiens dystonia 1, torsion (autosomal dominant; torsin A)
[synthetic construct]
gi|61372206|gb|AAX43801.1| dystonia 1 torsion [synthetic construct]
Length = 333
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|14149653|ref|NP_055321.1| torsin-1B precursor [Homo sapiens]
gi|297685534|ref|XP_002820342.1| PREDICTED: torsin-1B [Pongo abelii]
gi|13878818|sp|O14657.2|TOR1B_HUMAN RecName: Full=Torsin-1B; AltName: Full=Torsin family 1 member B;
Flags: Precursor
gi|12276124|gb|AAG50271.1|AF317129_1 FKSG18 [Homo sapiens]
gi|15990430|gb|AAH15578.1| Torsin family 1, member B (torsin B) [Homo sapiens]
gi|119608312|gb|EAW87906.1| torsin family 1, member B (torsin B) [Homo sapiens]
gi|123993057|gb|ABM84130.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|123993059|gb|ABM84131.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|123994041|gb|ABM84622.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000045|gb|ABM87531.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000047|gb|ABM87532.1| torsin family 1, member B (torsin B) [synthetic construct]
gi|124000715|gb|ABM87866.1| torsin family 1, member B (torsin B) [synthetic construct]
Length = 336
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>gi|410903756|ref|XP_003965359.1| PREDICTED: torsin-1A-like [Takifugu rubripes]
Length = 306
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 5/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +++ N LE L+ + GQ +A I A+ N + K L +SLHG
Sbjct: 23 ECCRPEWVYF-NRTGLEADLESKLFGQHIASRIILKAVSGFMSNE-NPKKPLVLSLHGWT 80
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I +IFK+ D S++VH F S +HFP+ + Y+ QL WI NV+
Sbjct: 81 GTGKNFVSELIAENIFKKGMD---SKYVHVFTSELHFPHSSQSDTYKTQLQQWIKGNVSE 137
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++F+FD +DK GL+D I P++D++ + +S++ IF+FLSN+GG I++ L+
Sbjct: 138 CGRSMFVFDGMDKMHPGLIDSIKPYLDYYDKLDGVSYRKAIFIFLSNAGGESIVDIALDF 197
Query: 181 RKS 183
K+
Sbjct: 198 WKA 200
>gi|119608313|gb|EAW87907.1| torsin family 1, member A (torsin A), isoform CRA_a [Homo sapiens]
gi|194378180|dbj|BAG57840.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|417399099|gb|JAA46581.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 333
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + VL++ L + GQ LA I AL N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREVLQKDLDSKLFGQHLAKKVILNALSAFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+A
Sbjct: 106 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D + PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAVKPFLDYYDHLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|395824225|ref|XP_003785371.1| PREDICTED: torsin-2A [Otolemur garnettii]
Length = 321
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVKDPAPTKPLVLSLHGWTGTGKSYV-----SSL 105
Query: 76 FKRYKDKGTSRF--VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
RY +G R VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 LARYLFQGGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACSRSLFLFDEMDK 165
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 166 MPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|410227204|gb|JAA10821.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410252330|gb|JAA14132.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410291796|gb|JAA24498.1| torsin family 1, member A (torsin A) [Pan troglodytes]
gi|410340071|gb|JAA38982.1| torsin family 1, member A (torsin A) [Pan troglodytes]
Length = 332
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>gi|241148995|ref|XP_002405989.1| torsin, putative [Ixodes scapularis]
gi|215493787|gb|EEC03428.1| torsin, putative [Ixodes scapularis]
Length = 346
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ +++ NV+ LE L+ +HGQ L I A+K+H QN KAL +S HG
Sbjct: 58 ECCSPPWVKD-NVKGLENTLRARLHGQPLVHRAIVRAVKDHLQNPAPK-KALVLSFHGWT 115
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
G GKNY + + +++ +KG S++V + S HFP+++ V YR L I + V
Sbjct: 116 GGGKNYASSMLAEALY----EKGMNSKYVSLYVSTKHFPHQDEVPKYRKSLQKEIEAKVK 171
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C R +FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L+
Sbjct: 172 ECGRTLFIFDEIDKMPNGLIDIIKPYLDFHEKLDDVDYRKSIFIFLSNTAGDVIARATLD 231
Query: 180 LRK 182
K
Sbjct: 232 AWK 234
>gi|332833110|ref|XP_001164380.2| PREDICTED: torsin-1A isoform 3 [Pan troglodytes]
gi|426363282|ref|XP_004048772.1| PREDICTED: torsin-1A [Gorilla gorilla gorilla]
Length = 364
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|224073510|ref|XP_002195238.1| PREDICTED: torsin-1A [Taeniopygia guttata]
Length = 360
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 106/166 (63%), Gaps = 6/166 (3%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L+ L + GQ L + A++ F N + K LA+SLHG GTGKN+V+ + S
Sbjct: 88 ALQGNLDNRLFGQHLVSKVVVKAVRG-FLNNTNAKKPLALSLHGWTGTGKNFVSKIVAES 146
Query: 75 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
I+K KG S++VH+F + +HFP+ + ++LY+ QL +WI NV+ C R++FIFDE+DK
Sbjct: 147 IYK----KGLQSKYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSVCPRSLFIFDEMDK 202
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
GL+D I PF+D++ + + +S++ IF+FLSN+G +I L+
Sbjct: 203 MHAGLIDSIKPFLDYYELLDGVSYRQAIFIFLSNAGAEKITEVALD 248
>gi|410340073|gb|JAA38983.1| torsin family 1, member A (torsin A) [Pan troglodytes]
Length = 444
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 160 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 216
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 217 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 273
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 274 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 333
Query: 181 RKS 183
+S
Sbjct: 334 WRS 336
>gi|113931292|ref|NP_001039096.1| torsin family 1, member A (torsin A) precursor [Xenopus (Silurana)
tropicalis]
gi|89268975|emb|CAJ83533.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
gi|169642167|gb|AAI60421.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
Length = 341
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L L+Q GQ LA I A+ F N + K LA+SLHG GTGKN+V+ I
Sbjct: 68 NQTALLADLRQKFFGQHLAQEVIYRAVLG-FMNNKNPKKPLALSLHGWTGTGKNFVSKII 126
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+I YK S+FVH F + HFP+++ V Y+ QL WI NVT C R +FIFDE+
Sbjct: 127 SDNI---YKQGFNSKFVHLFVATHHFPHDSKVQQYKDQLHMWIRGNVTLCPRNLFIFDEM 183
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK GL+D I PF+D++ + +S++N+IF+FLSN+GG I LE K+
Sbjct: 184 DKMQPGLIDAIKPFLDYYDNIDGVSYRNSIFVFLSNAGGDLITRKVLEFWKA 235
>gi|114627155|ref|XP_001164236.1| PREDICTED: torsin-1B [Pan troglodytes]
gi|397503607|ref|XP_003822412.1| PREDICTED: torsin-1B [Pan paniscus]
gi|410211328|gb|JAA02883.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410258156|gb|JAA17045.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410297250|gb|JAA27225.1| torsin family 1, member B (torsin B) [Pan troglodytes]
gi|410337923|gb|JAA37908.1| torsin family 1, member B (torsin B) [Pan troglodytes]
Length = 336
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 108/182 (59%), Gaps = 10/182 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ +
Sbjct: 64 NASALKLDLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIV 122
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDE 178
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ RK E I
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDI 238
Query: 187 EF 188
+
Sbjct: 239 QL 240
>gi|317108153|ref|NP_001186944.1| torsin family 1, member A-like precursor [Danio rerio]
Length = 336
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++I S N L+ L ++GQ +A I A+ F N K L +SLHG
Sbjct: 53 ECCRPEWI-SYNKTGLKYDLDTKLYGQHVAGQVILKAVTG-FMNNKKPKKPLVLSLHGWT 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ + +I+ + + S FVH F + HFP+E H+ Y+ QL +WI NV+
Sbjct: 111 GTGKNFVSQLLAENIYVKGME---SSFVHLFTATAHFPHEIHIDTYKTQLQDWIRGNVSI 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDE+DK GL+D I P++D + N +S++ IF+FLSN+GG I+ L+
Sbjct: 168 CPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFLSNAGGENIVQVALDF 227
Query: 181 RK 182
K
Sbjct: 228 WK 229
>gi|426226109|ref|XP_004007196.1| PREDICTED: LOW QUALITY PROTEIN: torsin-1A, partial [Ovis aries]
Length = 326
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 42 ECCSPK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 98
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 99 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 155
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 156 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 215
Query: 181 RKS 183
+S
Sbjct: 216 WRS 218
>gi|440894376|gb|ELR46845.1| Torsin-1B, partial [Bos grunniens mutus]
Length = 337
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 16/188 (8%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L++ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ +
Sbjct: 59 NASALKQDLEEKLFGQHLATEVIVKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQIV 117
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRL------QLTNWIISNVTACDRA 124
++ KG S FVH F S +HFP+E H+ LY+ QL WI NV+AC +
Sbjct: 118 AENLHP----KGLKSNFVHLFVSTLHFPHEQHIKLYQARNCYPDQLQRWIRGNVSACAGS 173
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL---- 180
+FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 174 VFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDFWRAG 233
Query: 181 RKSECIEF 188
RK E I+
Sbjct: 234 RKREDIQL 241
>gi|344271658|ref|XP_003407654.1| PREDICTED: torsin-1A [Loxodonta africana]
Length = 333
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVFG-FLNNPKPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
++
Sbjct: 223 WRN 225
>gi|442754385|gb|JAA69352.1| Hypothetical protein [Ixodes ricinus]
Length = 346
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ +++ NV+ LE L+ +HGQ L I A+K+H QN KAL +S HG
Sbjct: 58 ECCSPPWVKD-NVKGLENTLRARLHGQPLVHRAIVRAVKDHLQNPAPK-KALVLSFHGWT 115
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
G GKNY + + +++ +KG S++V + S HFP+++ V YR L I + V
Sbjct: 116 GGGKNYASSMLAEALY----EKGMNSKYVSLYVSTKHFPHQDEVPKYRKSLQKEIEAKVK 171
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C R +FIFDE+DK P GL+D+I P++D H + + ++ +IF+FLSN+ G I L+
Sbjct: 172 ECGRTLFIFDEIDKMPNGLIDIIKPYLDFHEKLDDVDYRKSIFIFLSNTAGDVIARATLD 231
Query: 180 LRKS 183
K
Sbjct: 232 AWKD 235
>gi|126297839|ref|XP_001369302.1| PREDICTED: torsin-1A [Monodelphis domestica]
Length = 335
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+A
Sbjct: 106 GTGKNFVSKIIAEHI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQQWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + IS+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGISYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|297685538|ref|XP_002820344.1| PREDICTED: torsin-1A isoform 1 [Pongo abelii]
Length = 364
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 193
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 194 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 253
Query: 181 RKS 183
+S
Sbjct: 254 WRS 256
>gi|148676551|gb|EDL08498.1| torsin family 1, member A (torsin A), isoform CRA_b [Mus musculus]
Length = 296
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 4/169 (2%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L++ L + GQ LA I A+ N K L +SLHG GTGKN+ + I +
Sbjct: 24 ALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWTGTGKNFASKIIAEN 82
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 83 I---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVSACARSIFIFDEMDKM 139
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+ KS
Sbjct: 140 HAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDFWKS 188
>gi|156390841|ref|XP_001635478.1| predicted protein [Nematostella vectensis]
gi|156222572|gb|EDO43415.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CTD +I S N+ L++ L + GQ L + A+K H N+ KALA+S +G
Sbjct: 49 EHCTDGWI-SPNMTGLKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWT 106
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNYV+ I ++++ D S +VH + FP+++ V Y+ QL WI+ NVT
Sbjct: 107 GCGKNYVSKIIAEHLYRKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTK 163
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDE+DK P+GL+ V+ PF+DH+ I F+ IFLFLSN+G I
Sbjct: 164 CGRSMFIFDEMDKMPEGLVGVLKPFLDHYPDVAGIDFRKCIFLFLSNTGAHSI 216
>gi|355725636|gb|AES08620.1| torsin family 1, member A [Mustela putorius furo]
Length = 343
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 60 ECCGQK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 116
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 117 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 173
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 174 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDHLDGVSYQKAIFIFLSNAGAERITDVALDF 233
Query: 181 RKS 183
+S
Sbjct: 234 WRS 236
>gi|355570052|gb|EHH25579.1| hypothetical protein EGK_21435, partial [Macaca mulatta]
gi|355753002|gb|EHH57048.1| hypothetical protein EGM_06608, partial [Macaca fascicularis]
Length = 271
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 10/179 (5%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L+ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + +
Sbjct: 2 ALKLDLEEKLFGQHLATEVILKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAEN 60
Query: 75 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK
Sbjct: 61 LHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDK 116
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECIEF 188
G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ RK E I+
Sbjct: 117 LHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQL 175
>gi|157427720|ref|NP_001098768.1| torsin-1A precursor [Sus scrofa]
gi|126513483|gb|ABO15832.1| torsin A [Sus scrofa]
Length = 333
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|126513481|gb|ABO15831.1| torsin A [Sus scrofa]
Length = 333
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|186469992|gb|ACC85613.1| torsin A [Sus scrofa]
Length = 251
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 49 ECCSQK--GSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL +WI NV+A
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKDQLQSWIRGNVSA 162
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L+
Sbjct: 163 CARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVALDF 222
Query: 181 RKS 183
+S
Sbjct: 223 WRS 225
>gi|344271874|ref|XP_003407762.1| PREDICTED: torsin-2A-like [Loxodonta africana]
Length = 321
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK+ F + TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKS-FVHDPAPTKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPVIHFPHPSHIERYKKDLKSWIQGNLTACSRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQAVLE 211
>gi|297270059|ref|XP_001118658.2| PREDICTED: torsin-1A, partial [Macaca mulatta]
Length = 279
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L++ L + GQ LA I A+ F N K L +SLHG GTGKN+V+ I +
Sbjct: 7 ALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWTGTGKNFVSKIIAEN 65
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 66 I---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKM 122
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+ +S
Sbjct: 123 HAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDFWRS 171
>gi|426223008|ref|XP_004005671.1| PREDICTED: torsin-2A [Ovis aries]
Length = 321
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+++ LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ +
Sbjct: 48 DLQGLECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLL 106
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+
Sbjct: 107 AQYLFR---DGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWVQGNLTVCSRSLFLFDEM 163
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 164 DKLAPGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|390464733|ref|XP_003733271.1| PREDICTED: torsin-1A-like [Callithrix jacchus]
Length = 367
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SL G
Sbjct: 83 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLRGWT 139
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 140 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 196
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 197 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 256
Query: 181 RKS 183
+S
Sbjct: 257 WRS 259
>gi|224073506|ref|XP_002195220.1| PREDICTED: torsin-1B [Taeniopygia guttata]
Length = 347
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C + Q N L+ QL + GQ LA + A+ F N K L +SLHG GT
Sbjct: 54 CCPRAGQRLNASALKAQLDNRLFGQHLAKDVVLKAVLG-FSNNPSPKKPLMLSLHGWAGT 112
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKN+++ + + + S+FVH F + +HFP+ + V LY+ QL NWI NV+AC
Sbjct: 113 GKNFLSQILAEQV---HPAGLRSKFVHLFLATLHFPHHDQVKLYKEQLQNWIRGNVSACP 169
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I L+
Sbjct: 170 SSVFIFDEMDKMHPGVIDAIKPFLDYYEEVDGVSYRKAIFIFLSNAGGDLINKAALDFWA 229
Query: 183 S 183
S
Sbjct: 230 S 230
>gi|405958380|gb|EKC24513.1| Torsin-1B [Crassostrea gigas]
Length = 624
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 6/173 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT K+I S N L+E L++ ++GQ L I LK+H +KAL +S HG
Sbjct: 328 ECCTSKWI-SLNTTALQEDLRRRLYGQHLVTDVIIKHLKSHMTK--DPSKALTLSFHGGT 384
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKNYV+ I SI YK+ S++VH ++ FP+++ V LY+ +L N + S+V
Sbjct: 385 GTGKNYVSKIIAESI---YKEGMRSKYVHLISATKEFPHKDMVPLYKDKLRNLVESSVNE 441
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C +++FIFDE+DK P G+LD + P+ D + ++ +F+FLSN+ G +I
Sbjct: 442 CPQSLFIFDEIDKMPAGILDTLKPYFDFYEQLGGTDYRRAMFIFLSNTAGEDI 494
>gi|432885695|ref|XP_004074720.1| PREDICTED: torsin-1B-like [Oryzias latipes]
Length = 374
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ L+ + GQ LA I A+ + F + + K L +SLHG GTGKN+V+ I +I
Sbjct: 70 LKMDLENKLFGQHLASRIILKAV-SEFMSNDNPKKPLVLSLHGPSGTGKNFVSQLIAENI 128
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
YK+ +S+FVH F S +HFPN + LY+ QL WI +V+ C+R++FIFDE+DK
Sbjct: 129 ---YKEGMSSKFVHVFTSTLHFPNPRLLPLYKYQLQQWIKDSVSNCERSMFIFDEMDKMH 185
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I P+++++ +S++ +IF+FLSN+GG I+ T L+ ++
Sbjct: 186 PGLIDSIQPYLEYYDKVVGVSYRKSIFIFLSNAGGEIIVQTALDFWRA 233
>gi|296190880|ref|XP_002743382.1| PREDICTED: torsin-2A [Callithrix jacchus]
Length = 321
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK N TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKAFVWNPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|354490153|ref|XP_003507224.1| PREDICTED: torsin-2A-like [Cricetulus griseus]
Length = 283
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK F +K L +SLHG GTGK+YV+ + +
Sbjct: 14 LECDLAQHLAGQHLAKALVVKSLKA-FVQELAPSKPLVLSLHGWTGTGKSYVSSLLAQYL 72
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 73 FQ---GGLRSPHVHHFSPTIHFPHPSHIEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 129
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 130 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 177
>gi|345487784|ref|XP_001606374.2| PREDICTED: torsin-like protein-like [Nasonia vitripennis]
Length = 335
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNT--KALAISLHG 58
E C D I S +L +K ++GQ++A + A+ +H +H+ K L +S HG
Sbjct: 46 ECCDDDTIPRSTYLLLH-NMKAKLYGQQIAKDLVFSAIHSHV---FHSNPRKPLVLSFHG 101
Query: 59 LPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 118
LPG+GKNYV I ++++K+ + S H FN R FPN++ V+LYR +L I + +
Sbjct: 102 LPGSGKNYVVSMIANALYKKGE---KSSHYHFFNGRSDFPNDHKVALYRFELDQKIKNAL 158
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+AC R++F+FDEVDK P G+LD ++PF+D+ + +N IF+FLSN+G +I+N L
Sbjct: 159 SACPRSMFVFDEVDKMPVGVLDTLVPFLDYTS-WNNKEKSKAIFIFLSNTGSDQIVNRML 217
Query: 179 EL 180
L
Sbjct: 218 HL 219
>gi|195163926|ref|XP_002022800.1| GL14553 [Drosophila persimilis]
gi|194104823|gb|EDW26866.1| GL14553 [Drosophila persimilis]
Length = 313
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D +NV+ LE+ L++ V+GQ +A+ HI AL HF ++ + K L +S HG PGT
Sbjct: 31 CCDVRSIPANVQALEKSLQKKVYGQHIAVPHIISALSAHFSSQVKSRKPLVLSFHGGPGT 90
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GK++V D I ++ Y S +V KF R +F HV+ Y+ + + +T C
Sbjct: 91 GKSFVADQIAQAL---YLQGSKSAYVAKFLGRANFAQAAHVATYKEHIDREVHKRLTNCP 147
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
R++FIFDEV+K P G+ D + +D++ + ++I IF+FLSN+GGT I
Sbjct: 148 RSLFIFDEVEKMPSGVFDTLKALLDYNGLDDEIDNTQAIFIFLSNNGGTHI 198
>gi|449266759|gb|EMC77775.1| Torsin-1A, partial [Columba livia]
Length = 272
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+E L + + GQ L + F N K LA+SLHG GTGKN+V+ I SI
Sbjct: 1 LQENLDKKLFGQHLVGKVVV-KAVKGFLNNTKAKKPLALSLHGWTGTGKNFVSKIIAESI 59
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
+KR S++VH+F + +HFP+ + ++LY+ QL +WI NV+ C R++FIFDE+DK
Sbjct: 60 YKR---GLQSKYVHQFVATLHFPHAHSINLYKDQLQSWIRGNVSICPRSLFIFDEMDKMH 116
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECIEFIFQ 191
GL+D I PF+D++ + +S++ IF+FLSN+G +I L+ R+ E I+
Sbjct: 117 AGLIDSIKPFLDYYEFLDGVSYRQAIFIFLSNAGAEKITEVALDFWRNGRRREDIQLTEM 176
Query: 192 CQPLKV 197
L V
Sbjct: 177 QNALSV 182
>gi|383873254|ref|NP_001244720.1| torsin family 2, member A precursor [Macaca mulatta]
gi|355567889|gb|EHH24230.1| Torsin family 2 member A [Macaca mulatta]
gi|380811858|gb|AFE77804.1| prosalusin isoform a [Macaca mulatta]
gi|383417613|gb|AFH32020.1| prosalusin isoform a [Macaca mulatta]
Length = 321
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +HV Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHVERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|62859007|ref|NP_001016237.1| torsin family 1, member B (torsin B) precursor [Xenopus (Silurana)
tropicalis]
gi|89268166|emb|CAJ82105.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
gi|170284863|gb|AAI61275.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
gi|213624224|gb|AAI70808.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
gi|213624467|gb|AAI71143.1| torsin family 1, member A (torsin A) [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N LE ++ GQ LA I + +N+ H K L +S HG GTGKNY++ +
Sbjct: 54 NSTALELDFDSNIFGQHLAKRVILKGVTGFMKNK-HPKKPLTLSFHGWTGTGKNYISQLL 112
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+I Y S+FVH+F + +HFP+ + + Y+ QL WI NV+ C+R+IFIFDEV
Sbjct: 113 ARNI---YGHGTESQFVHQFVATLHFPHASQIDKYKDQLQAWIKGNVSNCERSIFIFDEV 169
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK GL+D I PF+D++ IS++ IF+FLSN+GG I L+ K+
Sbjct: 170 DKMHPGLIDAIKPFLDYYEQLEGISYRKCIFIFLSNAGGEIISKLALDFWKN 221
>gi|355764024|gb|EHH62235.1| Torsin family 2 member A [Macaca fascicularis]
Length = 321
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +HV Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHVERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|118099300|ref|XP_415473.2| PREDICTED: torsin-1B [Gallus gallus]
Length = 365
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L EQL + GQ LA + A+ F N K L +SLHG GTGKN+++ +
Sbjct: 85 NATALREQLDGRLFGQHLAKEVVLRAVTG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQLL 143
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ + S+FVH F + +HFP+ V LY+ QL NWI NV+AC ++FIFDE+
Sbjct: 144 ARHV---HPAGLRSKFVHLFLATLHFPHPQRVPLYQEQLQNWIRGNVSACAHSVFIFDEM 200
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK +GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ S
Sbjct: 201 DKMHQGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTS 252
>gi|395506287|ref|XP_003757466.1| PREDICTED: torsin-1A [Sarcophilus harrisii]
Length = 321
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 37 ECCGRK--RSLSREALQKDLDSKLFGQHLAKKVILNAVSGFISNP-KTKKPLTLSLHGWT 93
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I I Y+ S +VH F + +HFP+ +++ Y+ QL WI NV+A
Sbjct: 94 GTGKNFVSKIIAEHI---YEGGLNSDYVHLFVATLHFPHAGNITQYKDQLQLWIRGNVSA 150
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 151 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLIDGVSYQKAIFIFLSNAGAERITDIALDF 210
Query: 181 RKS 183
+S
Sbjct: 211 WRS 213
>gi|158288268|ref|XP_310142.4| AGAP009547-PA [Anopheles gambiae str. PEST]
gi|157019168|gb|EAA05928.4| AGAP009547-PA [Anopheles gambiae str. PEST]
Length = 347
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 13/162 (8%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+++ L L+ ++GQ +A I A+ H N + K L +SLHGLPGTGKN+V + I
Sbjct: 72 DIQELRTALESSLYGQHIARQVIVNAIGGHLGNIEQSEKPLVMSLHGLPGTGKNFVAEHI 131
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+++KR S FVHKF RIHFP E+ V Y+ V C A+FIFDEV
Sbjct: 132 TRALYKR---GAASNFVHKFLGRIHFPLESEVKKYK----------VAKCPNALFIFDEV 178
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+K P GL D I+ +D+HA + F+ IF+FLSN G EI
Sbjct: 179 EKMPPGLFDSIVALLDNHAYTKALDFRKAIFIFLSNVAGPEI 220
>gi|2358281|gb|AAC51733.1| torsinB [Homo sapiens]
Length = 266
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Query: 20 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 79
L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+ + ++
Sbjct: 2 LEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLHP-- 58
Query: 80 KDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGL 138
KG S FVH F S +HFP+E + LY+ QL WI NV+AC ++FIFDE+DK G+
Sbjct: 59 --KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGI 116
Query: 139 LDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECIEF 188
+D I PF+D++ + +S++ IF+FLSN+GG I T L+ RK E I+
Sbjct: 117 IDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQL 170
>gi|134085667|ref|NP_001076945.1| torsin-2A precursor [Bos taurus]
gi|205831096|sp|A4FUH1.1|TOR2A_BOVIN RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|133777570|gb|AAI14886.1| TOR2A protein [Bos taurus]
gi|296482066|tpg|DAA24181.1| TPA: torsin family 2, member A precursor [Bos taurus]
Length = 321
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>gi|392901705|ref|NP_502684.2| Protein TOR-1 [Caenorhabditis elegans]
gi|211970666|emb|CAA19495.2| Protein TOR-1 [Caenorhabditis elegans]
Length = 310
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L L + ++GQ L I + ++K+H+ N H K L +S HG PGTGKNYVT+ I +
Sbjct: 22 LHRDLSRFIYGQHLVIDTVVRSIKSHWHNE-HPQKPLVLSFHGGPGTGKNYVTEIIAKNT 80
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S +V F + FPN H+ Y+L+L +I + CDR+IF+FDEVDK
Sbjct: 81 FR---SGLQSPYVKYFVATKDFPNNKHIEDYKLKLKEQLIQSADGCDRSIFVFDEVDKLQ 137
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
L+ I PF+D + ++ F+ T F+FLSN G +EI N LE R++
Sbjct: 138 SELVQTIKPFLDFYPAVFEVDFRKTTFIFLSNKGSSEIANIALEHRRN 185
>gi|440894377|gb|ELR46846.1| Torsin-1A, partial [Bos grunniens mutus]
Length = 357
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 8/185 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ K +S + L++ L + GQ LA I AL N K L +SLHG
Sbjct: 71 ECCSPK--RSLSREALQKDLDSKLFGQHLAKKVILNALSGFISNP-KPKKPLTLSLHGWT 127
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY--RLQLTNWIISNV 118
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY R QL +WI NV
Sbjct: 128 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHISNITLYKARDQLQSWIRGNV 184
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+AC R+IFIFDE+DK GL+D I P++D++ + +S+Q IF+FLSN+G I + L
Sbjct: 185 SACARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFIFLSNAGAERITDVAL 244
Query: 179 ELRKS 183
+ +S
Sbjct: 245 DFWRS 249
>gi|47228387|emb|CAG05207.1| unnamed protein product [Tetraodon nigroviridis]
Length = 334
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 5/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++I S N L L+ + GQ +A + I A+ N+ + K L +SLHG
Sbjct: 52 ECCRPEWI-SFNRTGLAVDLENKLFGQHIASNIILKAVSGFMSNK-NPKKPLVLSLHGWT 109
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I +I+K D S++VH F S +HFP+ + Y+ QL WI NV+
Sbjct: 110 GTGKNFVSELIAENIYKEGMD---SKYVHVFTSELHFPHSSQFDTYKTQLQQWIKGNVSE 166
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C ++FIFDE+DK GL+D I P++D++ + +S++ IF+FLSN+G I+ L+
Sbjct: 167 CASSMFIFDEMDKMHPGLIDSIKPYLDYYDKLDGVSYRKAIFIFLSNAGAESIVEKALDF 226
Query: 181 RKS 183
K+
Sbjct: 227 HKA 229
>gi|440900952|gb|ELR51972.1| Torsin-2A, partial [Bos grunniens mutus]
Length = 304
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 35 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 93
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 94 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 150
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 151 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 198
>gi|338720336|ref|XP_003364155.1| PREDICTED: torsin-1A-like [Equus caballus]
Length = 327
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L++ L + GQ LA I A+ F + K L +SLHG GTGKN+ + I +I
Sbjct: 56 LQKDLNSKLFGQHLAKKVILNAVSG-FMSNAKPKKPLTLSLHGWTGTGKNFASKIIAENI 114
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 115 ---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQLWIRGNVSACARSIFIFDEMDKMH 171
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +S
Sbjct: 172 AGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRS 219
>gi|402897879|ref|XP_003911965.1| PREDICTED: torsin-2A [Papio anubis]
Length = 321
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|326930342|ref|XP_003211306.1| PREDICTED: torsin-1B-like [Meleagris gallopavo]
Length = 337
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L EQL + GQ LA + A+ F N K L +SLHG GTGKN+++ +
Sbjct: 57 NATALREQLDGRLFGQHLAKEVVLRAVTG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQLL 115
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ + S+FVH F + +HFP+ V LY+ QL NWI NV+AC ++FIFDE+
Sbjct: 116 ARHV---HPAGLRSKFVHLFLATLHFPHPQRVPLYQEQLQNWIRGNVSACAHSVFIFDEM 172
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK +GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ S
Sbjct: 173 DKMHQGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTS 224
>gi|380030331|ref|XP_003698802.1| PREDICTED: torsin-like protein-like [Apis florea]
Length = 342
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT+++I S ++ L+E + ++GQE+A I AL+ H + + +KAL +S HG P
Sbjct: 44 ECCTNEYILS-DIDKLDEIFNKKLYGQEMAQHVIINALRAHLTSN-NPSKALVMSFHGPP 101
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK Y++ I + + YK S+F H FN R FP ++ V+ Y+ +L II ++
Sbjct: 102 GTGKTYISQMIANFL---YKKGDQSKFYHFFNGRNDFPLQDKVNEYKDELYKIIIGSLQK 158
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISF------QNTIFLFLSNSGGTEIM 174
C+R++F+FDEVDK P+GLL+V++PF+D++ F + I++FLSN+G I
Sbjct: 159 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTWVKSWRFTSYINARKAIYIFLSNTGSARIT 218
Query: 175 NTFLELRK 182
L L K
Sbjct: 219 QRLLTLWK 226
>gi|147905796|ref|NP_001087132.1| torsin family 1, member B (torsin B) precursor [Xenopus laevis]
gi|50603704|gb|AAH78046.1| MGC82811 protein [Xenopus laevis]
Length = 327
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N LE ++ GQ LA I + +N+ K L +S HG GTGKNY++ +
Sbjct: 54 NATALELDFDNNIFGQHLAKKVILKGVTGFLRNK-QPKKPLTLSFHGWTGTGKNYISQVL 112
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+I Y S FVH+F + +HFP+ N V Y+ QL WI NV+ C+R+IFIFDEV
Sbjct: 113 ARNI---YPQGMESHFVHQFVATLHFPHANQVDKYKDQLQAWIKGNVSNCERSIFIFDEV 169
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK GL+D I PF+D++ +S++ +IF+FLSN+GG I L+ K+
Sbjct: 170 DKMHPGLIDSIKPFLDYYEQLEGVSYRKSIFIFLSNAGGEIISKLALDFWKN 221
>gi|350416061|ref|XP_003490831.1| PREDICTED: torsin-like protein-like [Bombus impatiens]
Length = 349
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 12/187 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT ++I SS++ L++ L + + GQE+A I AL H + + KAL +S HG P
Sbjct: 50 ECCTTEYI-SSDIDKLDDILNKELFGQEIAHRVIINALYGHLTSS-NPPKALTMSFHGPP 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK Y++ I + YK+ S+F H FN R FP + V+ Y+ +L II+++
Sbjct: 108 GTGKTYISQLIAKVL---YKNGDQSKFYHFFNGRNDFPLQEKVNEYKEELYTIIINSLQK 164
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-------QISFQNTIFLFLSNSGGTEI 173
C+R++F+FDEVDK P+GLL+V++PF+D++A I+ + I++FLSN+G + I
Sbjct: 165 CERSMFVFDEVDKMPEGLLNVLVPFLDYNAWVKSWRLASISINTRKAIYIFLSNTGSSRI 224
Query: 174 MNTFLEL 180
L L
Sbjct: 225 TQRLLTL 231
>gi|110769879|ref|XP_001120885.1| PREDICTED: torsin-like protein [Apis mellifera]
Length = 320
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 116/186 (62%), Gaps = 11/186 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT+++I S++ L+E + ++GQE+A I AL+ H + + +KAL +S HG P
Sbjct: 22 ECCTNEYI-FSDIDKLDEIFNKELYGQEMAQHVIINALRAHLTSN-NPSKALVMSFHGPP 79
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK Y++ I + YK S+F H FN R FP ++ V+ Y+ +L II+++
Sbjct: 80 GTGKTYISQMIAKFL---YKKGDQSKFYHFFNGRNDFPLQDKVNEYKDELYKIIINSLQK 136
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHA------VYNQISFQNTIFLFLSNSGGTEIM 174
C+R++F+FDEVDK P+GLL+V++PF+D++ + + I+ + I++FLSN+G + I
Sbjct: 137 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTWIKSWRLASSINARKAIYIFLSNTGSSRIT 196
Query: 175 NTFLEL 180
L L
Sbjct: 197 QRLLTL 202
>gi|348570036|ref|XP_003470803.1| PREDICTED: torsin-2A-like [Cavia porcellus]
Length = 321
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ N K L +SLHGL GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVLKSLKAFVQDPAPN-KPLVLSLHGLSGTGKSYV-----SSL 105
Query: 76 FKRYKDKGT--SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+Y +G S VH F+ IHF + NH+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 LAKYLFRGGLHSPHVHHFSPIIHFSHPNHIERYKKDLKSWVQGNLTACGRSLFLFDEMDK 165
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 166 LPLGLMEVLRPFLGASWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|22779883|ref|NP_690013.1| torsin-2A precursor [Mus musculus]
gi|81878903|sp|Q8R1J9.1|TOR2A_MOUSE RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|19353775|gb|AAH24469.1| Torsin family 2, member A [Mus musculus]
gi|52632426|gb|AAH03466.1| Torsin family 2, member A [Mus musculus]
gi|74183981|dbj|BAE37036.1| unnamed protein product [Mus musculus]
gi|148676626|gb|EDL08573.1| torsin family 2, member A [Mus musculus]
Length = 321
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>gi|74140370|dbj|BAE42340.1| unnamed protein product [Mus musculus]
Length = 254
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>gi|432095397|gb|ELK26596.1| Torsin-2A [Myotis davidii]
Length = 324
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK QN TK L +SLHG GTGK+YV+ + +
Sbjct: 55 LECDLAQHLAGQHLAKALVVKALKAFVQNPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 113
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S +VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 114 FR---GGLRSPYVHHFSPVIHFPHPSHMERYKKDLKSWVQGNLTVCGRSLFLFDEMDKLT 170
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 171 PGLMEVLQPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 218
>gi|114626928|ref|XP_520274.2| PREDICTED: prosalusin isoform 3 [Pan troglodytes]
gi|397503470|ref|XP_003822345.1| PREDICTED: torsin-2A [Pan paniscus]
gi|410225606|gb|JAA10022.1| torsin family 2, member A [Pan troglodytes]
gi|410259694|gb|JAA17813.1| torsin family 2, member A [Pan troglodytes]
gi|410294324|gb|JAA25762.1| torsin family 2, member A [Pan troglodytes]
gi|410337665|gb|JAA37779.1| torsin family 2, member A [Pan troglodytes]
Length = 321
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|145386578|ref|NP_001078816.1| prosalusin isoform a precursor [Homo sapiens]
gi|37181468|gb|AAQ88547.1| TOR2A [Homo sapiens]
gi|119608099|gb|EAW87693.1| torsin family 2, member A, isoform CRA_d [Homo sapiens]
Length = 321
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|426363099|ref|XP_004048683.1| PREDICTED: prosalusin isoform 1 [Gorilla gorilla gorilla]
Length = 321
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|74742272|sp|Q5JU69.1|TOR2A_HUMAN RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-related protein 1; Flags: Precursor
Length = 321
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRS 215
>gi|340711596|ref|XP_003394361.1| PREDICTED: torsin-like protein-like [Bombus terrestris]
Length = 349
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 12/187 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT ++I SS++ L++ L + + GQE+A I AL H + KAL +S HG P
Sbjct: 50 ECCTTEYI-SSDIDKLDDILNKELFGQEIAHRVIINALYGHLTAS-NPPKALTMSFHGPP 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK Y++ I + YK+ S+F H FN R FP + V+ Y+ +L II+++
Sbjct: 108 GTGKTYISQLIAKVL---YKNGDQSKFYHFFNGRNDFPLQEKVNEYKEELYTIIINSLQK 164
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-------QISFQNTIFLFLSNSGGTEI 173
C+R++F+FDEVDK P+GLL+V++PF+D++A I+ + I++FLSN+G + I
Sbjct: 165 CERSMFVFDEVDKMPEGLLNVLVPFLDYNAWVKSWRLASISINTRKAIYIFLSNTGSSRI 224
Query: 174 MNTFLEL 180
L L
Sbjct: 225 TQRLLTL 231
>gi|332230081|ref|XP_003264216.1| PREDICTED: prosalusin isoform 1 [Nomascus leucogenys]
Length = 321
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|351697009|gb|EHA99927.1| Torsin-1A [Heterocephalus glaber]
Length = 345
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 18/195 (9%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA + A+ N K L +SLHG
Sbjct: 49 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKVVLNAVSGFLSNP-KPKKPLTLSLHGWT 105
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL------------ 108
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+
Sbjct: 106 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKAGAAGQRGGGGWD 162
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+
Sbjct: 163 QLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNA 222
Query: 169 GGTEIMNTFLELRKS 183
G I + L+ +S
Sbjct: 223 GAERITDVALDFWRS 237
>gi|355725649|gb|AES08625.1| torsin family 2, member A [Mustela putorius furo]
Length = 270
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 1 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 59
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 60 FR---GGLRSPHVHHFSPVIHFPHNSHMERYKKDLKSWVQGNLTACSRSLFLFDEMDKLA 116
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V++PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 117 PGLMEVLLPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVALEAWRS 164
>gi|307183367|gb|EFN70225.1| Torsin-like protein [Camponotus floridanus]
Length = 354
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 112/180 (62%), Gaps = 11/180 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E CT +I S++ LE L ++GQ++A I AL+ H N+ + KAL +S HG P
Sbjct: 55 ECCTYDYI-PSDLDKLEVMLAARLYGQQIAQETIINALRGHLGNK-DSPKALVMSFHGTP 112
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKNYV I + YK+ S++ + FN R FP + V Y+ +L + + +
Sbjct: 113 GTGKNYVAQMIAKAF---YKNGVQSQYYYFFNGRNDFPLQRKVDEYKEELYEAVSNALKK 169
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-----NQISFQN-TIFLFLSNSGGTEIM 174
C+R++F+FDEVDK P+GLL++++PF+D++ + ++I +QN IF+FLSN+G ++I+
Sbjct: 170 CERSLFVFDEVDKMPEGLLNILVPFLDYNMYHKPSKQSKIVYQNKAIFIFLSNTGSSQIV 229
>gi|301761930|ref|XP_002916375.1| PREDICTED: torsin-2A-like [Ailuropoda melanoleuca]
gi|281340094|gb|EFB15678.1| hypothetical protein PANDA_004446 [Ailuropoda melanoleuca]
Length = 321
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ I +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLIAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 111 FR---GGLRSPHVHHFSPVIHFPHASHMERYKKDLKSWVQGNLTACSRSLFLFDEMDKLD 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGSSWVVFGTNYRKAIFMFISNTGGEQINQVALEAWRS 215
>gi|410979368|ref|XP_003996057.1| PREDICTED: torsin-1A [Felis catus]
Length = 287
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L++ L + GQ LA I A+ N K L +SLHG GTGKN+V+ I +I
Sbjct: 16 LQKDLDSKLFGQHLAKKVILNAVSGFISNP-KPKKPLTLSLHGWTGTGKNFVSKIIAENI 74
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+ C R+IFIFDE+DK
Sbjct: 75 ---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSTCARSIFIFDEMDKMH 131
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +S
Sbjct: 132 AGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRS 179
>gi|156349540|ref|XP_001622100.1| predicted protein [Nematostella vectensis]
gi|156208526|gb|EDO30000.1| predicted protein [Nematostella vectensis]
Length = 281
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
CTD +I S N+ L++ L + GQ L + A+K H N+ KALA+S +G G
Sbjct: 39 CTDGWI-SPNMTGLKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWTGC 96
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GK YV+ I ++++ D S +VH + FP+++ V Y+ QL WI+ NVT C
Sbjct: 97 GKTYVSKIIAEHLYRKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTKCG 153
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG 170
R++FIFDE+DK P+GL+ V+ PF+DH+ I F+ IFLFLSN+G
Sbjct: 154 RSMFIFDEMDKMPEGLVGVLKPFLDHYPHVAGIDFRKCIFLFLSNTGA 201
>gi|432116601|gb|ELK37394.1| Torsin-1A [Myotis davidii]
Length = 301
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Query: 14 RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVS 73
+ L++ L + GQ LA I AL N K L +SLHG GTGKN+ + I
Sbjct: 28 QTLQKDLDHKLFGQHLAKKVILNALTGFISNP-KPKKPLTLSLHGWTGTGKNFASKIIAE 86
Query: 74 SIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK
Sbjct: 87 NI---YEGGLHSHYVHLFVATLHFPHASNLTLYKDQLQLWIRGNVSACARSIFIFDEMDK 143
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+D I PF+D++ + +S+Q IF+FLSN+G I + L+ +S
Sbjct: 144 MHAGLIDAIKPFLDYYDHVDGVSYQKAIFIFLSNAGAERITDVALDFWRS 193
>gi|326930358|ref|XP_003211314.1| PREDICTED: torsin-1A-like [Meleagris gallopavo]
Length = 267
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
Query: 50 KALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQ 109
K LA+SLHG GTGKN+V+ I SI+KR S +VH+F + +HFP+ + ++LY+ Q
Sbjct: 29 KPLALSLHGWTGTGKNFVSRIIAESIYKR---GLKSNYVHQFVATLHFPHAHSINLYKDQ 85
Query: 110 LTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSG 169
L +WI NV+ C R+IFIFDE+DK GL+D I PF+D++ + + +S++ IF+FLSN+G
Sbjct: 86 LQSWIRGNVSICPRSIFIFDEMDKMHAGLIDAIKPFLDYYELLDGVSYRQAIFIFLSNAG 145
Query: 170 GTEIMNTFLELRKS 183
+I L+ ++
Sbjct: 146 AEKITEVALDFWRN 159
>gi|410979152|ref|XP_003995949.1| PREDICTED: torsin-2A [Felis catus]
Length = 321
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV SS+
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYV-----SSL 105
Query: 76 FKRYKDKGTSR--FVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
RY +G R VH F+ IHFP+ HV Y+ L +W+ N+TAC R++F+FDE+DK
Sbjct: 106 VARYLFRGGLRSPHVHHFSPVIHFPHPGHVERYKKDLKSWVQGNLTACSRSLFLFDEMDK 165
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
GL++V+ PF+ V +++ IF+F+SN+GG +I LE
Sbjct: 166 LAPGLMEVLRPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVALE 211
>gi|363740454|ref|XP_415474.3| PREDICTED: torsin-1A isoform 2 [Gallus gallus]
Length = 334
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 109/179 (60%), Gaps = 5/179 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K ++ N V++ L++ V GQ LA+ + AL + Q++ K L +S HG
Sbjct: 51 ECCNAK--ETLNFSVVKMDLERKVFGQHLAVQIVLRALSMNLQSK-RPKKPLVMSFHGWT 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK++V+ I ++++ + FVH F++ +HF + +HV LY+ QL +WI NV+A
Sbjct: 108 GTGKSFVSSIIAENLYRL--NAWRRSFVHHFSTVLHFSHGSHVHLYKEQLQSWIRGNVSA 165
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C R++FIF E+D+ P GL+D I+PF+ + + + + IF+FL+N+GG +I L+
Sbjct: 166 CPRSLFIFSEMDQMPHGLIDSILPFLGYRGEIDGVHYGKAIFIFLNNAGGDKITEVALD 224
>gi|56090243|ref|NP_001007745.1| torsin-2A precursor [Rattus norvegicus]
gi|81884643|sp|Q6AYR4.1|TOR2A_RAT RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|50926149|gb|AAH78943.1| Torsin family 2, member A [Rattus norvegicus]
gi|149038991|gb|EDL93211.1| rCG45678, isoform CRA_c [Rattus norvegicus]
Length = 321
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|291414333|ref|XP_002723415.1| PREDICTED: torsin family 1, member B (torsin B) [Oryctolagus
cuniculus]
Length = 351
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 8/190 (4%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D S+ R ++ + + GQ LA I AL NR + K L +SLHG GT
Sbjct: 70 CCDLRQLSAVARESLQRDLEKLFGQHLATEVILKALTGFKSNR-NPKKPLTLSLHGWAGT 128
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKN+V+ + ++ R S FVH F S +HFP+E+ LY+ QL WI NV+AC
Sbjct: 129 GKNFVSQILAENLHPRGL---KSNFVHLFVSTLHFPHEHKTKLYQDQLQKWIHGNVSACA 185
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL-- 180
++FIFDE+DK G++D + PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 186 SSVFIFDEMDKLHPGVIDAVKPFLDYYEQIDGVSYRKAIFIFLSNAGGDLITKTALDFWR 245
Query: 181 --RKSECIEF 188
RK E I+
Sbjct: 246 AGRKREDIQL 255
>gi|269973842|emb|CBE66807.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQD 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 181 RKS 183
K
Sbjct: 231 MKG 233
>gi|194764121|ref|XP_001964180.1| GF20855 [Drosophila ananassae]
gi|190619105|gb|EDV34629.1| GF20855 [Drosophila ananassae]
Length = 340
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 56 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 114
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 115 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 171
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 172 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 231
Query: 181 RKS 183
K
Sbjct: 232 MKG 234
>gi|269972460|emb|CBE66810.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 181 RKS 183
K
Sbjct: 231 MKG 233
>gi|269972456|emb|CBE66808.1| CG3024-PA [Drosophila ananassae]
gi|269972462|emb|CBE66811.1| CG3024-PA [Drosophila ananassae]
gi|269972464|emb|CBE66812.1| CG3024-PA [Drosophila ananassae]
gi|269972466|emb|CBE66813.1| CG3024-PA [Drosophila ananassae]
gi|269973838|emb|CBE66805.1| CG3024-PA [Drosophila ananassae]
gi|269973840|emb|CBE66806.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP +HV +Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDVYKARLNYEVRKKLQN 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 181 RK 182
K
Sbjct: 231 MK 232
>gi|156400166|ref|XP_001638871.1| predicted protein [Nematostella vectensis]
gi|156225995|gb|EDO46808.1| predicted protein [Nematostella vectensis]
Length = 294
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 105/177 (59%), Gaps = 12/177 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D+ S+N+ LE K+ +GQ LA + ++K H + + +K L +SLHG GTGK
Sbjct: 19 DRLSLSANLTGLEASFKREFYGQHLATRVLLSSIKGHLKTK--GSKPLVLSLHGWTGTGK 76
Query: 65 NYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR 123
N+ T+ I +FK G S F++KF +HFP+++ +LYR QL WI SNVT C +
Sbjct: 77 NFATELIAQHLFKH----GIHSNFIYKFIIPLHFPHQSLAALYRSQLQQWITSNVTRCSK 132
Query: 124 -AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+F+FDE+DK P+G++DV+ PF+D + F IF+FLSN+G I LE
Sbjct: 133 GGLFVFDEMDKIPQGIVDVLKPFLDARGNH----FCKMIFVFLSNTGAKLINQHALE 185
>gi|322791335|gb|EFZ15825.1| hypothetical protein SINV_04568 [Solenopsis invicta]
Length = 350
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 110/181 (60%), Gaps = 13/181 (7%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGL 59
E CTD++I R LE L + GQ++A I AL+ H+++ HN+ KAL +S HG
Sbjct: 50 ECCTDEYIHPDLDR-LEYMLTAKLFGQDIARETIINALRGHYES--HNSPKALVMSFHGT 106
Query: 60 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
PGTGKNYV I + YK+ S++ H FN R FP + + Y+ L I +
Sbjct: 107 PGTGKNYVVQMIAKAF---YKNGMQSKYFHFFNGRNDFPLQRKLDEYKENLYKVISIALQ 163
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAV-----YNQISFQN-TIFLFLSNSGGTEI 173
CDR++F+FDEVDK P+ LL+V++PF+D+++ +++ +QN +F+FLSN+G +I
Sbjct: 164 QCDRSMFVFDEVDKMPEDLLNVLVPFLDYNSYHKSTKHSESMYQNKAVFIFLSNTGSAQI 223
Query: 174 M 174
+
Sbjct: 224 V 224
>gi|395506185|ref|XP_003757416.1| PREDICTED: torsin-2A [Sarcophilus harrisii]
Length = 397
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
++R LE L QH+ GQ L + LK +N K L +S HG GTGK+YV+ +
Sbjct: 122 DLRGLECDLAQHLAGQHLVRQLVMKGLKAFVENPA-PAKPLVMSFHGWTGTGKSYVSSML 180
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
V +F+ D S VH F+ IHFP+ + + Y+ L WI+ N+TAC R++F+FDEV
Sbjct: 181 VQYLFQ---DGMASPHVHHFSPVIHFPHADQIERYQSDLKQWILGNLTACGRSLFLFDEV 237
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DK GLL V+ PF+ V +++ IF+FLSN+GG +I L+ ++
Sbjct: 238 DKMHPGLLGVLRPFLGPSWVVYGTNYRKAIFIFLSNAGGEQINQVALDAWRA 289
>gi|383865514|ref|XP_003708218.1| PREDICTED: torsin-like protein-like [Megachile rotundata]
Length = 357
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 110/187 (58%), Gaps = 12/187 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++I S ++ L++ L + + GQE+A + AL+ H KAL +S HG P
Sbjct: 58 ECCNSEYI-SPDLDTLDDILSKELFGQEIAHHVVVNALRGHLITS-DPPKALTMSFHGPP 115
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK ++T I + YK S F H FN R FP E ++ Y+ +L N I++++
Sbjct: 116 GTGKTFMTQMIAKFL---YKKGDHSNFYHFFNGRNDFPLEKNLEQYKEELRNLIVNSLEK 172
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY-------NQISFQNTIFLFLSNSGGTEI 173
C+R++F+FDEVDK P+GLL+V++PF+D++ + N I+ + I++FLSN+G + I
Sbjct: 173 CERSMFVFDEVDKMPEGLLNVLVPFLDYNTLIKSWRFASNSINTRKAIYIFLSNTGSSRI 232
Query: 174 MNTFLEL 180
L L
Sbjct: 233 TQRLLNL 239
>gi|391329449|ref|XP_003739186.1| PREDICTED: torsin-1B-like [Metaseiulus occidentalis]
Length = 375
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 4/176 (2%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 67
++ ++ LE LKQ +HGQ L + + GA+ H N + KAL +S HG G GKNY
Sbjct: 83 LEENDYHYLEHVLKQSLHGQPLVYASVPGAVAQHLCNP-NPKKALVMSFHGWTGGGKNYA 141
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ + + ++K+ + S +V + S +HFP+ + + Y+ +L I+ V C R++FI
Sbjct: 142 SMLLANYLYKKGLE---SDYVKLYVSTLHFPHSDEIGRYKRKLQKEIVDQVKKCPRSMFI 198
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
FDE+DK P GL+D+I PF+D H + + ++ IF+FLSN+ G I L K+
Sbjct: 199 FDEIDKMPAGLIDIIKPFLDFHVALDGVDYRKCIFVFLSNTAGDLIARQALTYWKN 254
>gi|449266758|gb|EMC77774.1| Torsin-1B [Columba livia]
Length = 290
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S + L+ QL + GQ LA + A+ F N K L +SLHG GTGKN+++
Sbjct: 4 SPSPAALKAQLDTKLFGQHLAKDVVLKAVMG-FSNNPSPKKPLTLSLHGWAGTGKNFLSQ 62
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + + S+FVH F + +HFP+ V LY+ QL NWI NV+ C ++FIFD
Sbjct: 63 ILAERV---HPAGLRSKFVHLFLATLHFPHHEQVKLYKEQLQNWIRGNVSVCPHSVFIFD 119
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E+DK GL+D I PF+D++ + +S++ IF+FLSN+GG I L+ S
Sbjct: 120 EMDKMHPGLIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLINKAALDFWTS 173
>gi|359320512|ref|XP_851500.3| PREDICTED: torsin-2A [Canis lupus familiaris]
Length = 321
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ +L +W+ N+TAC R++F+FDE+DK
Sbjct: 111 FR---GGLHSPHVHHFSPVIHFPHASHLERYKKELKSWVQGNLTACSRSLFLFDEMDKLA 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE S
Sbjct: 168 PGLMEVLRPFLGSSWVVFGTNYRKAIFIFISNTGGEQINQVVLEAWHS 215
>gi|195133768|ref|XP_002011311.1| GI16067 [Drosophila mojavensis]
gi|193907286|gb|EDW06153.1| GI16067 [Drosophila mojavensis]
Length = 333
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 102/181 (56%), Gaps = 3/181 (1%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D+ ++ L++ L + ++GQ + ++ AL H Q+ + K L +S HG PGT
Sbjct: 46 CCDERSVPGDIEKLKQSLSRTLYGQHIVQQYVVSALSGHLQSTNPSRKPLVMSFHGTPGT 105
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GK++V D I ++ Y + S++VHKF R F + ++ Y+ ++ N + ++ C
Sbjct: 106 GKSFVADKIAEAL---YLEGTKSKYVHKFLGRADFAHPGRLNEYKERINNEVRQSIKQCP 162
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
R++FIFDEVDK P G+ D + FID+ A + IF+FLSN+ G EI + + L K
Sbjct: 163 RSLFIFDEVDKMPIGVFDTLTSFIDYAANKGDADYTKAIFIFLSNTAGIEISDHLVRLMK 222
Query: 183 S 183
S
Sbjct: 223 S 223
>gi|269972458|emb|CBE66809.1| CG3024-PA [Drosophila ananassae]
Length = 339
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E LK ++GQ + HI AL HF ++ + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIHALKESLKYRLYGQHIVTQHIIPALTAHFSSQSRSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP +HV Y+ +L + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASHVDTYKARLNYEVRKKLQN 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I + L
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGVHIADHLGNL 230
Query: 181 RK 182
K
Sbjct: 231 MK 232
>gi|358338120|dbj|GAA28088.2| torsin-1B [Clonorchis sinensis]
Length = 332
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ L H+HGQ +A + L H +R + KALA+S HG G GKN+V++ I S +
Sbjct: 61 LKHVLTHHLHGQHIATERVFHHLSAHMLDR-NPPKALALSFHGYTGVGKNFVSNLIASHV 119
Query: 76 FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
FKR GT SRF H ++S IHF + V Y+++L + V+AC ++F+FDE+
Sbjct: 120 FKR----GTKSRFFHFYDSTIHFAHRQKVHEYKVRLHKELREAVSACPYSVFVFDEMHNM 175
Query: 135 PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
P GLLDV+ P +D H + + F+ +IFLFLSN+GG I
Sbjct: 176 PSGLLDVLAPLLDFHESIDGVDFRRSIFLFLSNAGGNSI 214
>gi|355753001|gb|EHH57047.1| hypothetical protein EGM_06607 [Macaca fascicularis]
Length = 308
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 20/187 (10%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 72
VR L++ L + GQ LA I A+ F N K L +SLHG GTGKN+V+ I
Sbjct: 18 VRALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWTGTGKNFVSKIIA 76
Query: 73 SSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL----------------QLTNWIIS 116
+I Y+ S +VH F + +HFP+ ++++LY+ QL WI
Sbjct: 77 ENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMGVWNPFLDVVGFGDQLQLWIRG 133
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
NV+AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I +
Sbjct: 134 NVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDV 193
Query: 177 FLELRKS 183
L+ +S
Sbjct: 194 ALDFWRS 200
>gi|335308544|ref|XP_003122220.2| PREDICTED: torsin-2A-like, partial [Sus scrofa]
Length = 236
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 34 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 92
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+ AC R++F+FDE+DK
Sbjct: 93 FR---GGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWIQGNLPACSRSLFLFDEMDKLT 149
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 150 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 197
>gi|345306122|ref|XP_003428423.1| PREDICTED: torsin-1B-like [Ornithorhynchus anatinus]
Length = 306
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ + N L+ L+ + GQ LA I AL F+N + K L +SLHG
Sbjct: 65 ECCRDE--RPLNATALKSDLEDKLFGQHLAKEVIHKALTG-FRNNKNPKKPLTLSLHGWA 121
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E LY+ QL WI NV+
Sbjct: 122 GTGKNFVSQIVAENL----HSKGLKSSFVHLFVSTLHFPHEQQTKLYQDQLRKWIRGNVS 177
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG 170
C ++FIFDE+DK GL+D I PF+D++ + +S++N IF+FL +GG
Sbjct: 178 TCASSVFIFDEMDKLHPGLIDAIKPFLDYYEQIDGVSYRNAIFIFLRLAGG 228
>gi|195439148|ref|XP_002067493.1| GK16456 [Drosophila willistoni]
gi|194163578|gb|EDW78479.1| GK16456 [Drosophila willistoni]
Length = 341
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ I R L+ L+ V+GQ + HI A+ HF N + K L IS G P
Sbjct: 57 ECCDERSIPGLT-RSLQYNLETQVYGQHIVNKHIVQAISAHFNNLGTSRKPLVISFQGQP 115
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V D I +++ R + S+FVHKF R FP V Y+ +++ + +++ A
Sbjct: 116 GTGKNFVADHIAKALYTRGSE---SKFVHKFLGRADFPEAIRVDTYKQHISDVVRNSLKA 172
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ + + +D++A + + IF+FLSN+ G + + L
Sbjct: 173 CPRSLFIFDEVDKMPSGIFETLASLVDYNAFNDGTDHKKAIFIFLSNTAGVHVSDHLGTL 232
Query: 181 RKS 183
K
Sbjct: 233 MKG 235
>gi|149738294|ref|XP_001501517.1| PREDICTED: prosalusin-like isoform 1 [Equus caballus]
Length = 321
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + + Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSQMERYKKDLKSWVQGNLTTCGRSLFLFDEMDKLT 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|355725646|gb|AES08624.1| torsin family 1, member B [Mustela putorius furo]
Length = 185
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 101/167 (60%), Gaps = 8/167 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N L+ +L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 26 ECCREE--QRLNASALKLELEKKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWA 82
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 83 GTGKNFVSQIVAENL----HSKGLKSNFVHLFVSTLHFPHEQQIKLYQDQLQGWIRGNVS 138
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLS 166
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLS
Sbjct: 139 ACASSVFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFIFLS 185
>gi|268572445|ref|XP_002648964.1| Hypothetical protein CBG21284 [Caenorhabditis briggsae]
Length = 331
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE ++K V GQ L + A+K+H+ + + KAL +S HG G GKNYV + I +
Sbjct: 54 LEREIKTLVFGQHLVSDVVLNAIKSHWL-KENPQKALVLSFHGPTGCGKNYVAEIIARNA 112
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F + + N FP+ ++ YR+ L + IIS V C RA+FIFDE DK P
Sbjct: 113 FSGGLRSNQVKHIVATND---FPDVRKINEYRISLRDLIISTVKKCPRALFIFDETDKLP 169
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
LLD I PFID+H + ++ F+ TIF+FLSN GG+EI N LE
Sbjct: 170 AKLLDTIKPFIDYHPLISRFDFRKTIFIFLSNRGGSEIANITLE 213
>gi|255672031|gb|ACU26635.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVKQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|194353264|emb|CAQ53424.1| CG3024-PA [Drosophila melanogaster]
gi|255671997|gb|ACU26618.1| CG3024 [Drosophila melanogaster]
gi|255671999|gb|ACU26619.1| CG3024 [Drosophila melanogaster]
gi|255672001|gb|ACU26620.1| CG3024 [Drosophila melanogaster]
gi|255672005|gb|ACU26622.1| CG3024 [Drosophila melanogaster]
gi|255672009|gb|ACU26624.1| CG3024 [Drosophila melanogaster]
gi|255672019|gb|ACU26629.1| CG3024 [Drosophila melanogaster]
gi|255672025|gb|ACU26632.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 222
>gi|348539316|ref|XP_003457135.1| PREDICTED: torsin-1B-like [Oreochromis niloticus]
Length = 326
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E+C +I S N L+ L+ + GQ +A S I + F N + K L +SLHG
Sbjct: 44 ESCNSYWI-SFNQTGLKADLENKLFGQHIA-SDIIFKSVSGFMNDDNPKKPLVLSLHGPT 101
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ I +I+K KG S+FVH F++ +HFP+ + + Y+ QL WI + VT
Sbjct: 102 GTGKNFVSQLIADNIYK----KGYHSKFVHVFSATLHFPHRSEIVTYKSQLQEWIKNGVT 157
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C+R++FIFDE+++ P G++D I P++D+ V + FQ +I +FLSN+G +I T ++
Sbjct: 158 NCERSVFIFDEMNQIPPGVIDSIKPYLDYGKV-EGVFFQKSIIIFLSNTGADQITKTAVD 216
Query: 180 LRK 182
K
Sbjct: 217 FWK 219
>gi|194353260|emb|CAQ53422.1| CG3024-PA [Drosophila melanogaster]
gi|194353266|emb|CAQ53425.1| CG3024-PA [Drosophila melanogaster]
gi|194353268|emb|CAQ53426.1| CG3024-PA [Drosophila melanogaster]
gi|194353270|emb|CAQ53427.1| CG3024-PA [Drosophila melanogaster]
gi|194353272|emb|CAQ53428.1| CG3024-PA [Drosophila melanogaster]
gi|194353274|emb|CAQ53429.1| CG3024-PA [Drosophila melanogaster]
gi|194353278|emb|CAQ53431.1| CG3024-PA [Drosophila melanogaster]
gi|255672003|gb|ACU26621.1| CG3024 [Drosophila melanogaster]
gi|255672011|gb|ACU26625.1| CG3024 [Drosophila melanogaster]
gi|255672013|gb|ACU26626.1| CG3024 [Drosophila melanogaster]
gi|255672015|gb|ACU26627.1| CG3024 [Drosophila melanogaster]
gi|255672017|gb|ACU26628.1| CG3024 [Drosophila melanogaster]
gi|255672023|gb|ACU26631.1| CG3024 [Drosophila melanogaster]
gi|255672033|gb|ACU26636.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I ++ Y S +V KF + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVSEQIADAL---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|269972989|emb|CBE67039.1| CG3024-PA [Drosophila atripex]
Length = 339
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L+E L++ ++GQ + HI AL HF +R + K L IS HG P
Sbjct: 55 ECCDDRSI-PGNIEALKESLQRTLYGQHIVAQHIIPALTAHFSSRGTSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y + S +V K+ + FP ++V Y+ ++ + + + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPMASNVDSYKERINSEVRRKLQS 170
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G I +
Sbjct: 171 CPRSLFIFDEVDKMPSGVFDTLASLVDYNAFNDGTDNTKAIFIFLSNTAGVHIAD 225
>gi|223968747|emb|CAR94104.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V KF + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKFLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|225713978|gb|ACO12835.1| Torsin-1B precursor [Lepeophtheirus salmonis]
Length = 333
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 72
R L L + + GQ L + +LK+H KAL +S HG PGTGKNYV FI
Sbjct: 57 ARNLTFTLSKAIFGQHLVTKMVTNSLKSHLLKETPR-KALVLSFHGFPGTGKNYVAKFIA 115
Query: 73 SSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ Y D G + H S IHFP + Y+ Q+ NWI N+T C R++F+FDEV
Sbjct: 116 DAM---YPDTGLKNPHFHLIISTIHFPIPSQSYEYKSQVQNWIKGNITNCQRSVFVFDEV 172
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
DK P ++D I PFID H + I F+ IF+FL N+G +I EL
Sbjct: 173 DKMPPNVIDGIKPFIDFHEDIDGIDFRKAIFIFLGNTGAKKINERVNEL 221
>gi|363740456|ref|XP_003642336.1| PREDICTED: torsin-1A isoform 1 [Gallus gallus]
Length = 269
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 20 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 79
L++ V GQ LA+ + AL + Q++ K L +S HG GTGK++V+ I ++++
Sbjct: 3 LERKVFGQHLAVQIVLRALSMNLQSK-RPKKPLVMSFHGWTGTGKSFVSSIIAENLYRL- 60
Query: 80 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 139
+ FVH F++ +HF + +HV LY+ QL +WI NV+AC R++FIF E+D+ P GL+
Sbjct: 61 -NAWRRSFVHHFSTVLHFSHGSHVHLYKEQLQSWIRGNVSACPRSLFIFSEMDQMPHGLI 119
Query: 140 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
D I+PF+ + + + + IF+FL+N+GG +I L+
Sbjct: 120 DSILPFLGYRGEIDGVHYGKAIFIFLNNAGGDKITEVALD 159
>gi|109254998|gb|ABG26997.1| torsin A [Sistrurus catenatus edwardsi]
Length = 259
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 29 LAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG-TSRF 87
L + + G L N + K LA+SLHG GTGKN+V+ + S + D+G S++
Sbjct: 5 LPVKAVTGFLTNP-----NPKKPLALSLHGWTGTGKNFVSKIVAESFY----DEGLKSKY 55
Query: 88 VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID 147
VH+F S +HFP++ ++S Y+ QL WI NV++C R+IFIFDE+DK GL+D I PF+
Sbjct: 56 VHQFVSTLHFPHQQNISQYKDQLQTWIRGNVSSCARSIFIFDEMDKMHAGLIDSIKPFLP 115
Query: 148 HHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
H+ + IS++ IF+FLSN+G +I ++
Sbjct: 116 HYEEIDGISYRKAIFIFLSNAGAEKITEVAID 147
>gi|410903758|ref|XP_003965360.1| PREDICTED: torsin-1B-like, partial [Takifugu rubripes]
Length = 272
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L L+ + GQ +A I A+ +N H K L + L G GTGKN+V I ++I
Sbjct: 3 LRSDLENKLVGQHIASPIIFKAVAGFMKNP-HPRKPLVLFLQGPTGTGKNFVAQMIANNI 61
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
YK S+F H F ++ FP+++ + Y+ QL WI NV+ C +IF+FDEVDK
Sbjct: 62 ---YKKGNVSQFFHVFTYQLDFPHQSQIETYKSQLQQWIKGNVSRCAHSIFVFDEVDKLH 118
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL D I P++DHH +S++N IF+FLSN+G ++I L+ +S
Sbjct: 119 PGLFDSIYPYLDHHNQLQGVSYKNAIFIFLSNAGASDITKIALDFWQS 166
>gi|126297648|ref|XP_001365811.1| PREDICTED: torsin-2A-like [Monodelphis domestica]
Length = 321
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
++R LE L QH+ GQ L + LK F K L +S HG GTGK+YV+
Sbjct: 45 PDLRGLECDLAQHLAGQHLVRQLVVKRLKA-FVEDPAPAKPLVMSFHGWTGTGKSYVSSM 103
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+V +F+ S VH F+ IHFP+ + + Y+ L WI+ N+TAC R++F+FDE
Sbjct: 104 LVQYLFRHGM---ASPHVHHFSPVIHFPHADQIGRYQGDLKQWILGNLTACGRSLFLFDE 160
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSECIEFIF 190
VDK GLL V+ PF+ V +++ IF+FLSN+GG +I L+ ++
Sbjct: 161 VDKMHPGLLGVLRPFLGPSWVVYGTNYRKAIFIFLSNAGGEQINQLALDAWRARRDREEL 220
Query: 191 QCQPLKVYLKK 201
Q Q L+ + K
Sbjct: 221 QLQDLEPAISK 231
>gi|321462182|gb|EFX73207.1| hypothetical protein DAPPUDRAFT_129381 [Daphnia pulex]
Length = 286
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Query: 24 VHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG 83
V GQ +A + + H +N + +K L +S HG G GKN++ I +S RYK
Sbjct: 6 VFGQHIATEIVARQISAHLENP-NPSKPLVMSFHGWTGNGKNHIAYLIANS---RYKKGT 61
Query: 84 TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVII 143
S+F H F + +HFP++ H LY+ Q+ +W+ NV+ C ++F+FDEVDK P G+LD I
Sbjct: 62 KSQFYHHFMATVHFPHQEHAQLYQDQIRSWVKGNVSHCPHSLFVFDEVDKMPSGVLDGIR 121
Query: 144 PFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
++D+ + + + ++ +IF+FLSN+GG EI
Sbjct: 122 AYLDYIDIVDGVDYRKSIFIFLSNTGGKEI 151
>gi|223968759|emb|CAR94110.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSKYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 222
>gi|195565097|ref|XP_002106142.1| GD16282 [Drosophila simulans]
gi|194203514|gb|EDX17090.1| GD16282 [Drosophila simulans]
Length = 340
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE+ L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRSI-PARIDELEKSLERTLIGQHIVRQHIVPALKAHIASSDKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ +++ + + +
Sbjct: 111 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVDSYKAKISLEVRQTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDALTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|327281540|ref|XP_003225505.1| PREDICTED: torsin-3A-like [Anolis carolinensis]
Length = 380
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ LE L + +HGQ L + H+ F + KAL +S HG GTGKN+V
Sbjct: 104 TNNITGLELDLSRRLHGQHL-VKHVVLKAVQGFLETPNPEKALTLSFHGWSGTGKNFVAR 162
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + Y+D S V F S HFP+ +V +Y++QL I V C++++FIFD
Sbjct: 163 MMAEHL---YRDGLKSNCVRVFISLFHFPHSKYVDIYKVQLAREISETVQGCEQSLFIFD 219
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLLDV+ P++DHH + ++++ +IFLFLSN+GG I L+ ++
Sbjct: 220 EAEKLHAGLLDVLKPYVDHHDSIDMVNYRRSIFLFLSNTGGNIINEVALDFWRA 273
>gi|223968741|emb|CAR94101.1| CG3024-PA [Drosophila melanogaster]
gi|223968745|emb|CAR94103.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRNTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|194353276|emb|CAQ53430.1| CG3024-PA [Drosophila melanogaster]
Length = 340
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|255672021|gb|ACU26630.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|17542630|ref|NP_502683.1| Protein TOR-2 [Caenorhabditis elegans]
gi|3880770|emb|CAA19484.1| Protein TOR-2 [Caenorhabditis elegans]
Length = 412
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L + + GQ L + ++K+H+ N H+ K L +S HG GTGKNYVT+ I
Sbjct: 120 NYHALYKDFDNKIFGQHLMAESVVHSIKSHWHNE-HSQKPLVLSFHGGTGTGKNYVTEII 178
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
V++ Y+ S FV+ F + +FPN+ ++ Y+L+L + +I + C R+IFIFDE
Sbjct: 179 VNNT---YRSGMHSPFVNYFVATNNFPNKKYIEDYKLELKDQLIRSARRCQRSIFIFDET 235
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
DK L+ VI PF+D++ + F+ TIF+FLSN G EI N LE
Sbjct: 236 DKLQSELIQVIKPFLDYYPAVFGVDFRKTIFIFLSNKGSKEIANIALE 283
>gi|7331205|gb|AAF60321.1|AF236156_1 torsin-like protein [Drosophila melanogaster]
gi|3676145|emb|CAA21132.1| EG:84H4.1 [Drosophila melanogaster]
Length = 339
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 51 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 109
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 110 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 166
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 167 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 221
>gi|18859501|ref|NP_572178.1| torsin [Drosophila melanogaster]
gi|27923997|sp|O77277.2|TORS_DROME RecName: Full=Torsin-like protein; Flags: Precursor
gi|22831692|gb|AAF45969.2| torsin [Drosophila melanogaster]
gi|28317077|gb|AAO39557.1| LP10386p [Drosophila melanogaster]
gi|194353262|emb|CAQ53423.1| CG3024-PA [Drosophila melanogaster]
gi|220944282|gb|ACL84684.1| CG3024-PA [synthetic construct]
gi|220954126|gb|ACL89606.1| torp4a-PA [synthetic construct]
gi|223968737|emb|CAR94099.1| CG3024-PA [Drosophila melanogaster]
gi|223968739|emb|CAR94100.1| CG3024-PA [Drosophila melanogaster]
gi|223968743|emb|CAR94102.1| CG3024-PA [Drosophila melanogaster]
gi|223968749|emb|CAR94105.1| CG3024-PA [Drosophila melanogaster]
gi|223968751|emb|CAR94106.1| CG3024-PA [Drosophila melanogaster]
gi|223968753|emb|CAR94107.1| CG3024-PA [Drosophila melanogaster]
gi|223968755|emb|CAR94108.1| CG3024-PA [Drosophila melanogaster]
gi|223968757|emb|CAR94109.1| CG3024-PA [Drosophila melanogaster]
gi|255672027|gb|ACU26633.1| CG3024 [Drosophila melanogaster]
gi|255672029|gb|ACU26634.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 222
>gi|255672007|gb|ACU26623.1| CG3024 [Drosophila melanogaster]
gi|255672035|gb|ACU26637.1| CG3024 [Drosophila melanogaster]
Length = 340
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|27819927|gb|AAL39737.2| LD34179p, partial [Drosophila melanogaster]
Length = 353
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 65 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 123
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 124 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 180
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 181 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 235
>gi|148223816|ref|NP_001090629.1| torsin family 2, member A precursor [Xenopus (Silurana) tropicalis]
gi|89266883|emb|CAJ83950.1| novel protein similar to torsin [Xenopus (Silurana) tropicalis]
Length = 314
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
++ L+ L ++V GQ LA + ++K +N + +K L +SLHG GTGK +V+ +
Sbjct: 41 DLDALDCDLARNVFGQHLARELLFKSVKEFIEND-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+T C R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTTCSRSLFVFEEM 156
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ K
Sbjct: 157 DKMHPGLIDAIVPFLGSSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWK 207
>gi|242005695|ref|XP_002423698.1| Torsin B precursor, putative [Pediculus humanus corporis]
gi|212506874|gb|EEB10960.1| Torsin B precursor, putative [Pediculus humanus corporis]
Length = 307
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 21/184 (11%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C FI+ +++ L++ + ++GQ + I+ + LKN F KAL I +HG
Sbjct: 34 ERCNSNFIKP-DIKKLKKDFNELLYGQNIVINKLISTLKNRFNETPR--KALVILMHGWT 90
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFP--NENHVSLYRLQLTNWIISNV 118
G+GK + S+FVH FN RIHFP + +V Y++ + NWI N+
Sbjct: 91 GSGKTH----------------SKSKFVHFFNGRIHFPRNKKEYVDEYKINIQNWIKGNI 134
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+ C + FIFDEVDK P G+LD I P+ D++ + ++++N IF+F+SN GG+ I ++
Sbjct: 135 SNCHLSTFIFDEVDKIPAGVLDGIKPYFDYNDEIDSVNYKNGIFIFISNKGGSAINRKYM 194
Query: 179 ELRK 182
L K
Sbjct: 195 NLWK 198
>gi|148233034|ref|NP_001087470.1| torsin-2A precursor [Xenopus laevis]
gi|82181813|sp|Q68F68.1|TOR2A_XENLA RecName: Full=Torsin-2A; AltName: Full=Torsin family 2 member A;
Flags: Precursor
gi|51261412|gb|AAH79976.1| Tor2a protein [Xenopus laevis]
Length = 314
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 103/171 (60%), Gaps = 4/171 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
++ L+ L ++V GQ LA + ++K ++ + +K L +SLHG GTGK +V+ +
Sbjct: 41 DIEALDCDLARNVFGQHLAQELLFKSVKEFIESD-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+TAC R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTACGRSLFVFEEM 156
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ +
Sbjct: 157 DKMHPGLIDAIVPFLGTSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWR 207
>gi|449687076|ref|XP_004211348.1| PREDICTED: torsin-1A-like, partial [Hydra magnipapillata]
Length = 283
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C D +I + +V ++ L + + GQ L I + A+++H + + K L +S HG G+
Sbjct: 2 CDDNWI-NHDVSGIQNSLNEKLFGQHLVIKMVGKAVESHTKEK-SPKKPLVMSFHGWTGS 59
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GK++V D + + YK+ S+F+HK + H+P+ + Y+ +L N+I N C+
Sbjct: 60 GKSFVADIVAKHL---YKNGLKSKFIHKKIATFHYPHGGDLQKYKTELKNFIEYNAKKCE 116
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
R++FIFDEVDK P+GL DV+ P++D+H ++ IF+FLSN+ G +I N
Sbjct: 117 RSLFIFDEVDKLPEGLADVLKPYLDYHHALEGTDYRKNIFIFLSNTAGNKINN 169
>gi|345318614|ref|XP_001520965.2| PREDICTED: torsin-2A-like [Ornithorhynchus anatinus]
Length = 292
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L H+ GQ LA + A+++ Q+ +K L +S HG GTGK+YV+ +V +
Sbjct: 23 LECDLALHLAGQPLARQLVTKAVRDFVQDPA-PSKPLVLSFHGWTGTGKSYVSSLLVRYL 81
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ + S VH F+ +HFP+ + + LY+ L WI N+TAC R++F+FDE+DK
Sbjct: 82 FQ---EGMRSPHVHYFSPIVHFPHPDRIDLYKEDLKGWIQGNLTACGRSLFLFDEMDKMH 138
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE---LRK 182
GL+DV+ PF+ V +++ IF+F+SN+GG +I LE LRK
Sbjct: 139 PGLIDVLRPFLGPSWVLFGTNYRKAIFIFISNAGGEQINQLALEYWRLRK 188
>gi|195340779|ref|XP_002036990.1| GM12675 [Drosophila sechellia]
gi|194131106|gb|EDW53149.1| GM12675 [Drosophila sechellia]
Length = 340
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L+ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRSI-PARIHELERSLESTLIGQHIVKQHIVPALKAHIASSDKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ ++ + + +
Sbjct: 111 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVGSYKAKINLEVRQTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDALTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 220
>gi|156390839|ref|XP_001635477.1| predicted protein [Nematostella vectensis]
gi|156222571|gb|EDO43414.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L++ L + GQ L + A+K H N+ KALA+S +G G GKNYV+ I +
Sbjct: 4 LKKSLDNRLFGQHLVKDIVYKAVKGHVTNK-SPQKALALSFNGWTGCGKNYVSKIIAEHL 62
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
+K+ D S +VH + FP+++ V Y+ QL WI+ NVT C ++FIFDE+DK P
Sbjct: 63 YKKGID---SSYVHVMIATHDFPHKSMVETYKEQLKRWIVGNVTKCGPSMFIFDEMDKMP 119
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG----TEIMNTFLELRKSE 184
+GL+ V+ PF+DH+ I F+ IFLFLSN+G E + + RK E
Sbjct: 120 EGLVGVLKPFLDHYPDVAGIDFRKCIFLFLSNTGAHSLNEETLMNWQRGRKRE 172
>gi|431898848|gb|ELK07218.1| Torsin-2A [Pteropus alecto]
Length = 322
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 53 LECDLAQHLAGQHLARALVVKALKAFAQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 111
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH ++ IHFP+ +++ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 112 FR---GGLRSPHVHHYSPVIHFPHPSNMERYKKDLKSWVQGNLTVCGRSLFLFDEMDKLA 168
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
GL++V+ PF+ +V +++ IF+F+SN+GG +I LE
Sbjct: 169 PGLMEVLRPFLGSSSVVFGTNYRKAIFIFISNTGGEQINQVALE 212
>gi|351707208|gb|EHB10127.1| Torsin-2A [Heterocephalus glaber]
Length = 321
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + LK Q+ N K L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVLKLLKAFVQDPAPN-KPLVLSLHGWTGTGKSYISSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>gi|195398849|ref|XP_002058033.1| GJ15712 [Drosophila virilis]
gi|194150457|gb|EDW66141.1| GJ15712 [Drosophila virilis]
Length = 338
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I N+ L E L Q + GQ + H+ AL H ++ + K L +S HG P
Sbjct: 49 ECCDDRSI-PGNMTKLYESLSQTLFGQHMVQQHVMPALVAHLKSDSPSRKPLVMSFHGTP 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK++V D I ++ Y + S++VHK+ R F + ++ Y+ ++ + +
Sbjct: 108 GTGKSFVADQIAQAL---YVEGAKSKYVHKYLGRADFAHPGRINEYKERINREVREFIQD 164
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++FIFDEVDK P G+ D + +D+ A + IF+FLSN+ G I + EL
Sbjct: 165 CPRSLFIFDEVDKMPIGVFDTLTSLVDYAANVKGTDYTKAIFIFLSNTAGVRISDHLAEL 224
Query: 181 RK 182
K
Sbjct: 225 MK 226
>gi|326930287|ref|XP_003211279.1| PREDICTED: torsin-2A-like [Meleagris gallopavo]
Length = 486
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +L + GQ L + L+ + R K L +S HG GTGK +V+ +V +
Sbjct: 217 LECELAVTLVGQPLVRQQLMKGLRRFLEKRSPE-KPLVMSFHGSTGTGKTFVSSMLVRHL 275
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F + SR+VH+F+ +HFP+ HV Y+ L +WI N+T C R++F+F+E+DK
Sbjct: 276 FP---EGLRSRYVHQFSPIVHFPHAEHVERYKENLKHWIQGNLTNCGRSVFLFEEMDKMH 332
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+DVI+PF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 333 PGLIDVIMPFLGPSWVVYGTNYRKAIFIFISNAGGEQINEMTLDLWRA 380
>gi|269973043|emb|CBE67066.1| CG3024-PA [Drosophila phaeopleura]
Length = 339
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 6/184 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ I N+ L+ L++ ++GQ + HI AL HF +R + K L IS HG P
Sbjct: 55 ECCDNRSI-PGNIPALKASLQRTLYGQHIVTQHIIPALTAHFSSRDTSRKPLVISFHGQP 113
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW-IISNVT 119
GTGKN+V + I ++ Y + S +V K+ + FP ++V Y+ ++ NW + +
Sbjct: 114 GTGKNFVAEQIAQAL---YLEGSKSGYVSKYLGQADFPIASNVDSYKTRI-NWEVRRQLQ 169
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 170 SCPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFNDGTDNTKAIFIFLSNTAGSHIADHLGN 229
Query: 180 LRKS 183
L K
Sbjct: 230 LMKG 233
>gi|221101785|ref|XP_002161025.1| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 331
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 6/201 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +++I++ + + +L +H+ GQ L + + + NH N + T LA+S HG
Sbjct: 48 ECCNNQWIKTPSFNPFKAKLDEHIFGQHLVNNDVSSKVVNHITNE-NPTSPLALSFHGGT 106
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGK+YV+ I ++ DKG S FVH F+ HF ++ ++ Y+++LT I S++
Sbjct: 107 GTGKSYVSKIIAELLY----DKGVDSDFVHFFHPMKHFQIKSMLNQYKIELTQKIESSLK 162
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
C+R++FIFDE + P GL D I+PF++H+ + ++ +IF+FLSN+G I N L+
Sbjct: 163 NCERSLFIFDEFQEMPIGLSDSIVPFLEHNFNIKGVDYRKSIFIFLSNTGADIINNHVLQ 222
Query: 180 LRKSECIEFIFQCQPLKVYLK 200
K++ F L+ LK
Sbjct: 223 HYKNKKFREAFNNTKLEKNLK 243
>gi|326679265|ref|XP_684868.5| PREDICTED: torsin-1A-like [Danio rerio]
Length = 355
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+ L + GQ +A + I ++ + + N K L +SLHG GTGKN+VT + +I
Sbjct: 83 LEKDLNDFLFGQHIASNVILKSVSSFMTDSKPN-KPLVLSLHGTTGTGKNHVTKILARNI 141
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
+K+ ++ S+ V + S +FP+ V LY QL WI NV++ R++FIFDE+DK
Sbjct: 142 YKKGEE---SKHVQIYVSEYNFPDRGKVDLYTAQLRQWIYGNVSSFPRSMFIFDEMDKMQ 198
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
L+DV+ PF+D+ V N +SF N IF+FLSN+GG I + L+
Sbjct: 199 PQLIDVLKPFLDYSLV-NGVSFHNAIFIFLSNAGGKVIADLALD 241
>gi|224073396|ref|XP_002194162.1| PREDICTED: torsin-2A, partial [Taeniopygia guttata]
Length = 268
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 20 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 79
L +V GQ L + ++ +N + K L +S HG GTGK YV+ ++ +F+R
Sbjct: 3 LATNVVGQPLVRQQVMKGVREFLENP-NPVKPLVMSFHGSTGTGKTYVSSMLIRYLFQRG 61
Query: 80 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 139
S +VH F+ +HFP+ + Y+ L WI N+T C R+ F+FDE+DK GL+
Sbjct: 62 LQ---SPYVHHFSPIVHFPHAEQIEQYKESLKRWIQGNLTNCGRSAFLFDEMDKMHPGLI 118
Query: 140 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DVIIPF+ V +++ IF+F+SN+GG +I N L L ++
Sbjct: 119 DVIIPFLGPSWVVYGTNYRKAIFIFISNAGGEQINNVTLALWRA 162
>gi|194578971|ref|NP_001124104.1| uncharacterized protein LOC100170794 precursor [Danio rerio]
gi|190338900|gb|AAI63643.1| Zgc:194342 protein [Danio rerio]
Length = 323
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 4 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTG 63
TD + + R L+ + ++GQ + +S + + F + K L +S HG GTG
Sbjct: 40 TDGLLPFNRTR-LQADFDKSLYGQHI-VSDVVPKSVSFFMTDKNPNKPLVLSFHGTAGTG 97
Query: 64 KNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR 123
KN+V I +++K+ + S+ VH F S+ HFP++ +V +Y QL WI NV++ R
Sbjct: 98 KNHVAKIIARNVYKKGE---KSKHVHTFISQFHFPHQENVHMYSAQLKQWIHGNVSSFPR 154
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL-RK 182
++FIFDE+DK L+D+I PF+D++ + +SF IF+FLSN+GG I++ L+ RK
Sbjct: 155 SMFIFDEMDKMHPELIDIIKPFLDYNYNVDGVSFHTAIFIFLSNAGGNVIVDLALDFWRK 214
Query: 183 SECIE 187
+ E
Sbjct: 215 GKSRE 219
>gi|449265765|gb|EMC76908.1| Torsin-2A, partial [Columba livia]
Length = 267
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 20 LKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRY 79
L +++ GQ L + L+ F + + K L +S HG GTGK YV+ +V +F+
Sbjct: 2 LARNLVGQPLVRQQVMKGLRE-FLEKQNPVKPLVMSFHGSTGTGKTYVSSMLVRYLFQ-- 58
Query: 80 KDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLL 139
S +VH+F+ +HFP+ H+ Y+ L WI N+T C R+ F+FDE+DK GL+
Sbjct: 59 -GGLQSPYVHQFSPLVHFPHAEHIEQYKENLKRWIQGNLTNCGRSAFLFDEMDKMHPGLI 117
Query: 140 DVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DVIIPF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 118 DVIIPFLGPSWVVYGNNYRKAIFIFISNAGGEQINEMTLDLWRA 161
>gi|206557850|sp|P0C7W1.1|TOR2X_BOVIN RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-alpha; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 242
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|157105996|ref|XP_001649118.1| torsin a [Aedes aegypti]
gi|108879944|gb|EAT44169.1| AAEL004448-PA [Aedes aegypti]
Length = 346
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 14/180 (7%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +I++ +V L+ LK ++GQ + + A+ H+ N ++ K L +S HG P
Sbjct: 60 ECCRKPYIKA-DVAALKASLKGSLYGQHIVQDVLVNAIGAHYDNIENSRKPLVMSFHGTP 118
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKNYV+DF+ +++ YK+ +S+FV+K+ + S L + V
Sbjct: 119 GTGKNYVSDFVAAAL---YKNGISSKFVYKYTA----------SDLDTDLAASVKQTVKN 165
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C ++FIFDE+++ P G+ D I+ +DHH+ F +IF+FLSNS G EI L
Sbjct: 166 CPYSLFIFDEIERMPTGVFDSIVSLLDHHSALKGFDFTKSIFIFLSNSAGIEIAKKLKSL 225
>gi|197313700|ref|NP_001127902.1| prosalusin isoform c precursor [Homo sapiens]
gi|74750929|sp|Q8N2E6.1|TOR2X_HUMAN RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-alpha; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
gi|22761716|dbj|BAC11667.1| unnamed protein product [Homo sapiens]
gi|119608100|gb|EAW87694.1| torsin family 2, member A, isoform CRA_e [Homo sapiens]
Length = 242
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|332833066|ref|XP_003312381.1| PREDICTED: prosalusin isoform 1 [Pan troglodytes]
Length = 242
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|426363101|ref|XP_004048684.1| PREDICTED: prosalusin isoform 2 [Gorilla gorilla gorilla]
Length = 242
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|195477071|ref|XP_002100080.1| GE16843 [Drosophila yakuba]
gi|194187604|gb|EDX01188.1| GE16843 [Drosophila yakuba]
Length = 341
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + L+ L + GQ + H+ ALK H + K L IS HG P
Sbjct: 53 ECCDDRSI-PARINELKRSLDDTLFGQHIVKQHVIPALKAHIAAGNKSRKPLVISFHGQP 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FPN + + Y++++ + +++ +
Sbjct: 112 GTGKNFVAEQIADAL---YLQGSKSSYVTKYLGQADFPNADQLGFYKMRINLEVRNSLRS 168
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D++ +D++A + IF+FLSN+ G+ I
Sbjct: 169 CPRSLFIFDEVDKMPSGVFDMLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 221
>gi|145386549|ref|NP_569726.2| prosalusin isoform b precursor [Homo sapiens]
gi|162318066|gb|AAI56919.1| Torsin family 2, member A [synthetic construct]
gi|162319250|gb|AAI56123.1| Torsin family 2, member A [synthetic construct]
gi|182888133|gb|AAI60144.1| Torsin family 2, member A [synthetic construct]
Length = 253
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|14042534|dbj|BAB55288.1| unnamed protein product [Homo sapiens]
gi|119608097|gb|EAW87691.1| torsin family 2, member A, isoform CRA_b [Homo sapiens]
Length = 253
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|332230083|ref|XP_003264217.1| PREDICTED: prosalusin isoform 2 [Nomascus leucogenys]
Length = 256
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|205831098|sp|P0C7W3.1|TOR2X_MOUSE RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 231
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFI 197
>gi|348504994|ref|XP_003440046.1| PREDICTED: torsin-3A-like [Oreochromis niloticus]
Length = 367
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ L L+ +HGQ LA S + A++ F N + K L +S HG GTGKN+V
Sbjct: 92 TNNITGLARDLQTKLHGQHLAESVVLKAIQG-FINNPESNKPLTLSFHGWSGTGKNFVAR 150
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
I ++ Y+D S V F + HFP+ V Y+ QL I V C + +FIFD
Sbjct: 151 IIADNL---YRDGVKSECVRLFIAPFHFPHARLVDTYKGQLREAIRDMVLRCPQTLFIFD 207
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GL+D I PF+DH+ + +S++ IFLFLSN GG I + L+ S
Sbjct: 208 EAEKLHPGLIDAIKPFMDHYDNVDGVSYRRAIFLFLSNIGGATINDVALDFWHS 261
>gi|194888337|ref|XP_001976900.1| GG18527 [Drosophila erecta]
gi|190648549|gb|EDV45827.1| GG18527 [Drosophila erecta]
Length = 341
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + +L+ L + + GQ + H+ ALK H + K L IS HG P
Sbjct: 53 ECCDDRSI-PARIDLLKRSLDETLIGQHIVKQHVVSALKAHINANSKSRKPLVISFHGQP 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V++ I ++ Y S +V K+ + FPN++ V Y+ ++ + +++
Sbjct: 112 GTGKNFVSEQIADAL---YLLGSKSSYVTKYLGQADFPNQSMVDAYKNRINIEVRNSLRR 168
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I
Sbjct: 169 CPRSLFIFDEVDKMPSGVFDTLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHI 221
>gi|410921496|ref|XP_003974219.1| PREDICTED: torsin-3A-like [Takifugu rubripes]
Length = 361
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ L + L+ +HGQ LA S + A++ F N + K L +S HG GTGKN+V
Sbjct: 86 TNNITGLSKDLQTKLHGQHLAQSVVLKAIQG-FINNPESNKPLTLSFHGWSGTGKNFVAR 144
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
I ++ Y+D S V F + HFP+ V Y+ QL I V C + +FIFD
Sbjct: 145 MIADNL---YRDGVKSECVRLFIAPFHFPHTRLVDAYKGQLREAIRDMVLRCPQTLFIFD 201
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GL+D I P++DH+ + +S++ IFLFLSN GG I + L+ S
Sbjct: 202 EAEKLHPGLIDAIKPYMDHYDNVDGVSYRTAIFLFLSNIGGATINDVALDFWHS 255
>gi|449684272|ref|XP_002171133.2| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 299
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++++Q+ ++ LE + V GQ L H+ A+ +H + + L +S HG
Sbjct: 14 ECCNNEWLQTPSLSDLENVISSKVFGQHLINKHVSTAVIHHIKTN-NPASPLVMSFHGGT 72
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ I SIFK KG S+FV + HFPN+N + Y+ +L+ I ++
Sbjct: 73 GTGKNFVSQIIAESIFK----KGLNSKFVRVIRATKHFPNKNKLEEYKNELSRLIENSAK 128
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 177
C+R +FIFDE + P GL D I PF+D++ + I ++ IF+FLSN+ +I+N++
Sbjct: 129 LCERTLFIFDEFHEMPIGLGDSIAPFLDYNNQLDGIDYRKNIFIFLSNTTA-DIINSY 185
>gi|291225280|ref|XP_002732628.1| PREDICTED: torsin family 1, member B (torsin B)-like [Saccoglossus
kowalevskii]
Length = 321
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C+ +I + + L L+++V GQ + + + ++ H NR + KAL +S HG
Sbjct: 28 ETCSKAWI-TLDTDGLAHDLEKNVFGQHIVRTVVLRSVSRHINNR-NPDKALVLSFHGWG 85
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GK YV+ F+ ++ YK+ S+FVH S +P+ + Y+ +L + I+
Sbjct: 86 GIGKTYVSQFLAKNL---YKEGTRSKFVHLITSS-DYPHSKKLDDYKDELRSRIMEAGKL 141
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
CDR +FIF+++DK P GL+DV+ PFID++ Y + ++ IF+F SNSGG I N E+
Sbjct: 142 CDRQLFIFEDMDKMPPGLIDVLKPFIDNYPEYFSVDYRKNIFVFTSNSGGHIINNKVFEM 201
Query: 181 RK 182
K
Sbjct: 202 WK 203
>gi|190194286|ref|NP_001121738.1| torsin-3A precursor [Danio rerio]
Length = 367
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ LE L+ +HGQ LA S + A++ +N N K L +S HG GTGKN+V
Sbjct: 92 TNNITGLERDLQLKLHGQHLAQSVVLKAIQGFIKNPESN-KPLTLSFHGWSGTGKNFVAR 150
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ V +Y+ QL I V C + +FIFD
Sbjct: 151 IVADNL---YRDGIKSECVRLFIAPFHFPHARLVDVYKGQLREAIRDMVLRCPQTLFIFD 207
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GL+D I P++DH+ + +S++ IFLFLSN GG I L+ S
Sbjct: 208 EAEKLHPGLIDAIKPYMDHYDNVDGVSYRRAIFLFLSNIGGGAINEVALDFWHS 261
>gi|224058998|ref|XP_002191767.1| PREDICTED: torsin-3A [Taeniopygia guttata]
Length = 410
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N+ LE L +HGQ LA + A++ Q+ KAL +S HG GTGKN+V
Sbjct: 135 NNITGLEADLSGQLHGQHLAKDVVVRAVQGFLQSP-RPRKALVLSFHGWSGTGKNFVARM 193
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ S + Y+D S V F S +HFP+ N+V Y+ QL I + C +A+ IFDE
Sbjct: 194 VASHL---YRDGLRSDCVRVFVSLLHFPHHNYVDSYKAQLQRQISETLQRCRQALLIFDE 250
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K LLD I PF+ H Q Q +IFLFLSN GG I L+ ++
Sbjct: 251 AEKLHSNLLDAIKPFMAQHGSEGQADQQRSIFLFLSNLGGNTINEVALDFWRA 303
>gi|210111770|gb|ACJ07156.1| torsin 2A [Sus scrofa]
Length = 146
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 1 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 59
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H+ Y+ L +WI N+TAC R++F+FDE+DK
Sbjct: 60 FR---GGLRSPHVHHFSPVIHFPHPSHMERYKKDLKSWIQGNLTACSRSLFLFDEMDKLT 116
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 117 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 146
>gi|363740424|ref|XP_415507.3| PREDICTED: torsin-2A-like [Gallus gallus]
Length = 324
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +L + GQ L + L+ + R K L +S HG GTGK +V+ +V +
Sbjct: 55 LECELAVTLVGQPLVRRQLMEGLRQFLEKRS-PEKPLVMSFHGSTGTGKTFVSAMLVRHL 113
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F + S VH+F+ +HFP+ HV Y+ L +WI N+T C R++F+F+E+DK
Sbjct: 114 FP---EGLQSPHVHQFSPIVHFPHAEHVERYKENLKHWIQGNLTNCGRSVFLFEEMDKMH 170
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL+DVI+PF+ V +++ IF+F+SN+GG +I L+L ++
Sbjct: 171 PGLIDVIMPFLGPSWVVYGTNYRKAIFIFISNAGGEQINEMTLDLWRA 218
>gi|206557851|sp|P0C7W2.1|TOR2X_RAT RecName: Full=Prosalusin; AltName: Full=Torsin family 2 member A;
AltName: Full=Torsin-2A; Contains: RecName:
Full=Salusin-beta; Flags: Precursor
Length = 231
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFI 197
>gi|449266474|gb|EMC77527.1| Torsin-3A, partial [Columba livia]
Length = 355
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N+ LE L + +HGQ LA + A++ Q+ KAL +S HG GTGKN+V
Sbjct: 80 NNITGLEADLNRQLHGQHLAKEVVVQAVRGFLQSP-QPQKALVLSFHGWSGTGKNFVARM 138
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ S + Y+D S+ V F S HFP+ +V Y+ QL I V C +++FIFDE
Sbjct: 139 LASHL---YRDGLKSKCVRVFISLFHFPHHTYVDSYKAQLKKQISETVQLCKQSLFIFDE 195
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K LLD I PF+ + +Q+ ++ +IFLFLSN GG I L+ ++
Sbjct: 196 AEKLHFSLLDAIKPFMARYDNKDQLDYRRSIFLFLSNLGGNAINEVALDFWRA 248
>gi|341879135|gb|EGT35070.1| hypothetical protein CAEBREN_17173 [Caenorhabditis brenneri]
Length = 347
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ + + GQ L + ALK H+ N + K L +S HG G+GKNYV + I
Sbjct: 59 NYHSLDADIANLLFGQHLVKDVVVNALKAHWHNE-NPKKPLVLSFHGYTGSGKNYVAEII 117
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ F++ G FV + FP+++ + Y+++L N I+S V C R++FIFDE
Sbjct: 118 ANNTFRQGLRSG---FVQHIVATNDFPDKSKIEDYQMELRNRILSTVQKCHRSLFIFDET 174
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
DK P+ LL I PF+D+++ + + F+ ++F+ LSN GG +I + L+
Sbjct: 175 DKLPEQLLGAIKPFLDYYSTISGVDFRRSVFILLSNKGGGKISDITLK 222
>gi|17535353|ref|NP_495917.1| Protein OOC-5, isoform a [Caenorhabditis elegans]
gi|14787712|emb|CAC44293.1| Protein OOC-5, isoform a [Caenorhabditis elegans]
Length = 350
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ + + GQ L + ++K+H+ N + K L +S HG G+GKNYV + I
Sbjct: 59 NYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGKNYVAEII 117
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ F+ S FV + FP++N + Y+++L N I++ V C R+IFIFDE
Sbjct: 118 ANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEA 174
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI
Sbjct: 175 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEI 216
>gi|17535351|ref|NP_495916.1| Protein OOC-5, isoform b [Caenorhabditis elegans]
gi|27923866|sp|Q95NU5.1|TORS_CAEEL RecName: Full=Torsin-like protein; AltName: Full=Abnormal oocyte
formation protein 5; Flags: Precursor
gi|14787713|emb|CAC44294.1| Protein OOC-5, isoform b [Caenorhabditis elegans]
Length = 356
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ + + GQ L + ++K+H+ N + K L +S HG G+GKNYV + I
Sbjct: 65 NYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGKNYVAEII 123
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ F+ S FV + FP++N + Y+++L N I++ V C R+IFIFDE
Sbjct: 124 ANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEA 180
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEI 222
>gi|431898901|gb|ELK07271.1| Torsin-1A [Pteropus alecto]
Length = 382
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 14/138 (10%)
Query: 57 HGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL-------- 108
HG GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++V+LY+
Sbjct: 140 HGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKARAEFRNSS 196
Query: 109 ---QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ + +S+Q IF+FL
Sbjct: 197 WMDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDNLDGVSYQKAIFIFL 256
Query: 166 SNSGGTEIMNTFLELRKS 183
SN+G I + LE +S
Sbjct: 257 SNAGAERITDVALEFWRS 274
>gi|225718326|gb|ACO15009.1| Torsin-1B precursor [Caligus clemensi]
Length = 336
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 5/180 (2%)
Query: 3 CTDKFIQSSNV--RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
C ++ ++N R L + L + + GQ L + ++ +H + KAL +S HGL
Sbjct: 49 CYERNPDNANAMARNLTKTLSEGIFGQHLVKKMVVRSIGSHLRVE-KPAKALVLSFHGLT 107
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GKNYV I ++++ + S V+ F S +HFP + Y++ + WI S++T
Sbjct: 108 GVGKNYVAKMIANAMYPM--EGMNSPHVNLFISTLHFPIASQGPAYKVIVQEWIQSSITL 165
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C ++FIFDE+DK P ++D I PFID H +++ IF+FLSN+GG +I N EL
Sbjct: 166 CPNSLFIFDEIDKMPPDVIDGIKPFIDFHENVGGRNYRKAIFIFLSNTGGKQITNFVHEL 225
>gi|47225644|emb|CAG07987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 4/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ L L+ +HGQ LA S + A++ F N + K L +S HG GTGKN+V
Sbjct: 72 TNNITGLARDLQTKLHGQHLAQSVVLKAIQG-FINNPESNKPLTLSFHGWSGTGKNFVAR 130
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
I ++ Y+D S V F + HFP+ V Y+ QL I V C + + IFD
Sbjct: 131 MIADNL---YRDGVKSECVRLFIAPFHFPHARLVDAYKGQLREAIRDLVLRCPQTLLIFD 187
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GL+D I P++DH+ + +S++ IFLFLSN GG I + L+ S
Sbjct: 188 EAEKLHPGLIDAIKPYMDHYDNVDGVSYRTAIFLFLSNIGGAAINDVALDFWHS 241
>gi|338720542|ref|XP_003364191.1| PREDICTED: prosalusin-like isoform 2 [Equus caballus]
Length = 242
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK Q+ TK L +SLHG GTGK+Y++ + +
Sbjct: 52 LECDLAQHLAGQHLARALVVKALKAFVQDPA-PTKPLVLSLHGWTGTGKSYISSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + + Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSQMERYKKDLKSWVQGNLTTCGRSLFLFDEMDKLT 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>gi|308509242|ref|XP_003116804.1| CRE-OOC-5 protein [Caenorhabditis remanei]
gi|308241718|gb|EFO85670.1| CRE-OOC-5 protein [Caenorhabditis remanei]
Length = 367
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ + ++GQ L + A+K H+ N K L +S HG G+GKNYV + I ++
Sbjct: 80 LDADIANLLYGQHLVKDVVVNAIKAHWFNE-SPRKPLVLSFHGYTGSGKNYVAEIIANNT 138
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
FK+ S FV + FP+++ + Y+++L N I++ V C R+IFIFDE DK P
Sbjct: 139 FKQ---GLRSNFVQHIVATNDFPDKSKIEDYQMELRNRILTTVQKCHRSIFIFDETDKLP 195
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ LL I PF+D+++ + + F+ +IF+ LSN GG +I L+
Sbjct: 196 EQLLGAIKPFLDYYSSVSGVDFRRSIFILLSNKGGGKIAEITLK 239
>gi|268532522|ref|XP_002631389.1| C. briggsae CBR-OOC-5 protein [Caenorhabditis briggsae]
Length = 350
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ + + GQ L + A+K H+ N + K L +S HG G+GKNYV + I ++
Sbjct: 63 LDADIANMLFGQHLVKDVVVNAIKAHWHNE-NPKKPLVLSFHGYTGSGKNYVAEIIANNT 121
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
FK+ S F+ + FP++N + Y+ +L N I++ C R+IFIFDE DK P
Sbjct: 122 FKQ---GLRSNFIQHIVATNDFPDKNKIEEYKTELRNRILTTAQKCHRSIFIFDETDKLP 178
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ LL I PF+D+++ + + F+ +IF+ LSN GG +I L+
Sbjct: 179 EQLLGAIKPFLDYYSKISGVDFRRSIFILLSNKGGGKIAEITLK 222
>gi|195059693|ref|XP_001995684.1| GH17628 [Drosophila grimshawi]
gi|193896470|gb|EDV95336.1| GH17628 [Drosophila grimshawi]
Length = 271
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L L + GQ + H+ AL H ++ + K+L +S HG PGTGK++V D I ++
Sbjct: 4 LHHSLSTTLFGQHMVSQHVLPALVAHLKSNSPSRKSLVMSFHGTPGTGKSFVADQIAEAL 63
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y + S+FVHK+ R F + V Y+ ++ + ++ C R++FIFDEVDK P
Sbjct: 64 ---YLEGTKSKFVHKYLGRADFAHPARVHEYKNRINKEVRESIRDCPRSLFIFDEVDKMP 120
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
G+ D + +D+ I + IF+FLSN+ G I + +L K
Sbjct: 121 IGIFDTLTSLVDYAGNGGDIDYTKAIFIFLSNTAGIRISDHLADLMK 167
>gi|126306459|ref|XP_001374059.1| PREDICTED: torsin-3A-like [Monodelphis domestica]
Length = 400
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ LE L +HGQ LA I +++ F + K L +S HG GTGKN+VT
Sbjct: 125 TNNITGLETDLSIRLHGQHLAQEVILKSVRG-FLSVPQPKKPLVLSFHGWTGTGKNFVTR 183
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + Y+D S V F S +HFP+ +V +Y+ +L + V C +A+F+FD
Sbjct: 184 ILADHL---YRDGLESECVQVFISTLHFPHLRYVDMYKEKLKRQVRDTVKNCGQALFVFD 240
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P LL+ + PF++ HA ++ ++ IFLFLSN GG I L K+
Sbjct: 241 EAEKLPPSLLETLKPFLN-HATVGEVDYRRAIFLFLSNLGGNIINEVVLNWLKA 293
>gi|50751128|ref|XP_422270.1| PREDICTED: torsin-3A [Gallus gallus]
Length = 405
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 5/173 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N+ LE L + +HGQ LA + A++ Q+ KAL +S HG GTGKN+V
Sbjct: 131 NNITGLELDLHEQLHGQHLAKEVVIQAVRGFLQSP-QPQKALVLSFHGWSGTGKNFVARM 189
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + + Y+D S V F + HFP+ +V Y++QL I V C++++FIFDE
Sbjct: 190 VAAHL---YRDGLKSECVRVFIALFHFPHHKYVDSYKVQLEKQISETVQLCEQSLFIFDE 246
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K GLLDVI PF+ + Q + +IFLFLSN GG+ I L+ ++
Sbjct: 247 AEKLHSGLLDVIKPFMA-RSDKGQQDNRRSIFLFLSNIGGSAINEVALDFWRA 298
>gi|221109350|ref|XP_002168862.1| PREDICTED: torsin-1B-like, partial [Hydra magnipapillata]
Length = 275
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C + +++ + ++ L+EQLK + GQ L + + +H +N + + L +S HG
Sbjct: 6 ECCNNLWVRQNPLK-LKEQLKSKLFGQHLVEDLVIKPINDHIENN-NPSSPLVMSFHGWT 63
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G+GKN+ + I +S+FK+ + S+FVH + FP++ ++ Y+ +L+ I N
Sbjct: 64 GSGKNFASQIIANSLFKKGMN---SKFVHIKVATKDFPHKKMLTEYKNELSKHIEKNARL 120
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 177
C+R +FIFDE + P+GL + I P++D++ + I ++ IF+FLSNS G EI+N +
Sbjct: 121 CERTLFIFDEFHEMPEGLGNTIAPYLDYNVQLDGIDYRKNIFIFLSNSVG-EIINNY 176
>gi|449682277|ref|XP_002160115.2| PREDICTED: uncharacterized protein LOC100214659 [Hydra
magnipapillata]
Length = 643
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++++ ++ LE++L + V GQ L + A+ +H +N+ + L +S HG
Sbjct: 60 ECCNNQWL-IQDLSGLEKELNEKVFGQHLVNKLVGKAVNSHIKNK-DSKSPLVMSFHGWT 117
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK +V+ + +S+FK+ + S+FV++ FP+ H+ Y+++L +I +N+
Sbjct: 118 GTGKTFVSQIVANSLFKKGIN---SKFVYQKIVTKDFPHNFHLEKYKIELNEYIKTNIGK 174
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C+R +FIFDE +K P+GL +V+ P++++ N ++ +IF+FLSN+ G +I
Sbjct: 175 CERTLFIFDEFEKMPEGLANVMTPYLENQI--NSQDYRKSIFIFLSNTAGDKI 225
>gi|351697010|gb|EHA99928.1| Torsin-1B [Heterocephalus glaber]
Length = 306
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 20/173 (11%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
++ R L++ L++ + GQ LA I AL F+N + K L +SLHG GTGKN+V+
Sbjct: 49 ADSRALKQDLEEKLFGQHLATEVILKALTG-FKNNKNPKKPLTLSLHGWAGTGKNFVSQI 107
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + R S FVH ++ QL WI NV+ C ++FIFDE
Sbjct: 108 MADHLHPRGL---KSHFVHLYD----------------QLQKWIHGNVSKCANSMFIFDE 148
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ ++
Sbjct: 149 MDKLHPGIIDAIKPFLDYYEQVDGVSYRRAIFIFLSNAGGDIITRTALDFWRA 201
>gi|345802903|ref|XP_547446.3| PREDICTED: torsin-3A [Canis lupus familiaris]
Length = 601
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + A+K + + + KALA+S HG GTGKN+V
Sbjct: 324 SNNFTGLESDLSIRLHGQHLARELVLTAVKGYLELPRPD-KALALSFHGWSGTGKNFVAR 382
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 383 LLAENL---YRDGQRSDCVKMFIATFHFPHPKYVDLYKEQLTTQIKKTQERCHQTLFIFD 439
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLEL 180
E +K GLL+V+ P ++ A N + + TIFLFLSN GG + L L
Sbjct: 440 EAEKLHPGLLEVLRPHLERQAPENHRAKSRKTIFLFLSNLGGNIVNEAVLNL 491
>gi|195059683|ref|XP_001995682.1| GH17629 [Drosophila grimshawi]
gi|193896468|gb|EDV95334.1| GH17629 [Drosophila grimshawi]
Length = 278
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L L + GQ + H+ AL H ++ + K+L +S HG PGTGK++V D I ++
Sbjct: 4 LHHSLSTTLFGQHMVSQHVLPALVAHLKSNSPSRKSLVMSFHGTPGTGKSFVADQIAEAL 63
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y + S+F HK+ R F + V Y+ ++ + ++ C R++FIFDEVDK P
Sbjct: 64 ---YLEGTKSKFFHKYFGRADFAHPARVHEYKERINKEVRESIRDCPRSLFIFDEVDKMP 120
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
G+ D + +D+ I + IF+FLSN+ G I + +L K
Sbjct: 121 IGVFDTLTSLVDYAGNGGDIDYTKAIFIFLSNTAGIRISDHLADLMK 167
>gi|432960950|ref|XP_004086508.1| PREDICTED: torsin-2A-like [Oryzias latipes]
Length = 311
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N+R LE + ++V GQ L + + QN+ + + L +S HG GTGK V+ +
Sbjct: 38 NIRDLEWDIYKNVFGQHLVQDIVSEEVVKFLQNK-NPDRPLVLSFHGSSGTGKTLVSSML 96
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ +F +S +VH+F + +HFP + V YR +L +W+ N+T C +IFIFDE+
Sbjct: 97 GTHLFA---SAMSSPYVHQFVATLHFPVPHRVQQYRRELKSWVQGNLTECAHSIFIFDEM 153
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
++ P GL+DV+ PF+ V +++ +++F+S++G I LE R+S
Sbjct: 154 ERMPAGLVDVLEPFLGPSHVVFYTNYRKAVYVFISSTGEEVINRAALENRQS 205
>gi|432856699|ref|XP_004068494.1| PREDICTED: torsin-1A-like [Oryzias latipes]
Length = 272
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L + L +HGQ L S + A++ F N + K L +S HG GTGKN+V I ++
Sbjct: 3 LAKDLHTKLHGQHLVQSVVLKAIQG-FVNHPESNKPLTLSFHGWSGTGKNFVARIIAENL 61
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y+D S V F + HFP+ V Y+ QL I V C + +FIFDE +K
Sbjct: 62 ---YRDGVKSECVRLFIAPFHFPHARLVDTYKGQLREAIRDMVLRCPQTLFIFDEAEKLH 118
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
G +D I P++DH+ + ++++ IFLFLSN GG I + L+ S
Sbjct: 119 PGFIDAIKPYMDHYDNVDGVTYRRAIFLFLSNIGGAAINDVALDFWHS 166
>gi|326924760|ref|XP_003208593.1| PREDICTED: torsin-3A-like [Meleagris gallopavo]
Length = 563
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
NV LE +H+HGQ LA + AL+ Q+ KAL +S HG GTGKN+V +
Sbjct: 290 NVTGLELDFHEHLHGQHLAKEIVIRALQGFLQSP-QPQKALVLSFHGWSGTGKNFVARMV 348
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ + Y+D S V F + HFP+ +V Y++QL I V C +++FIFDE
Sbjct: 349 AAHL---YRDGLKSECVRVFIALFHFPHYKYVDSYKVQLEKQISETVQLCKQSLFIFDEA 405
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K GLLDVI PF + Q + +IFLFLSN GG+ I L+ ++
Sbjct: 406 EKLHFGLLDVIKPFTA-RSDKGQQDNRRSIFLFLSNIGGSAINEVALDFWRA 456
>gi|395530887|ref|XP_003767518.1| PREDICTED: torsin-3A [Sarcophilus harrisii]
Length = 536
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N+ LE L +HGQ L + +++ F + K L +S +G GTGKN+VT +
Sbjct: 263 NITGLEIDLSTRLHGQHLVQEVVLKSIRG-FLSMPQPEKPLVLSFNGWSGTGKNFVTRML 321
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ Y+D S V F S +HFP+ +V +Y+ +L + V C +A+F+FDE
Sbjct: 322 ADQL---YRDGLESECVQVFISMLHFPHLKYVDVYKEKLMEQVSDTVQRCGQALFVFDEA 378
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K P LL+ + P +DH+ ++ ++ IF+FLSN GG I L K+
Sbjct: 379 EKLPPNLLETLKPILDHYDTIKEVDYRRAIFIFLSNFGGNTINEVVLSWLKA 430
>gi|449690971|ref|XP_002164488.2| PREDICTED: torsin-1A-like, partial [Hydra magnipapillata]
Length = 345
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C + +++ S + L++QL + GQ L + + +H +N + + L +S HG
Sbjct: 63 ECCNNLWVRQSPI-YLKKQLNSKLFGQHLVEDLVVKPINDHIENN-NPSSPLVMSFHGWT 120
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G+GKN+V+ I +S+FK+ + S+FVH + FP++ ++ Y+ +L+ I N
Sbjct: 121 GSGKNFVSQIIANSLFKKGMN---SKFVHIKVAAKDFPHKKLLTEYKNELSKHIEKNARL 177
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 177
C+R +FIFDE + P+GL + I P++D++ + I ++ IF+FLSNS G EI+N +
Sbjct: 178 CERTLFIFDEFHEMPEGLGNTIAPYLDYNVQLDGIDYRKNIFIFLSNSVG-EIINNY 233
>gi|357617375|gb|EHJ70752.1| putative Torsin family protein [Danaus plexippus]
Length = 346
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELA--ISHICGALKNHFQNRYH-NTKALAISLH 57
E C D ++ + ++ LE+ LK + GQ L + I A K +++ N KAL +SLH
Sbjct: 50 ECCNDNYV-NFDIEKLEQSLKNQLFGQPLVNELPKILKAHKESLKDKTQKNKKALVLSLH 108
Query: 58 GLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISN 117
G G GKNY T FI +IFK+ S+FV F + F N R +L N + +
Sbjct: 109 GWSGVGKNYATTFIAEAIFKK---GMKSQFVKVFMGKKDFDCSNLQESQR-KLINEVNNI 164
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 177
V C ++ IFDE+ + +LD I P +DHH + + ++N IF+F+SN GG EI +
Sbjct: 165 VKKCSTSLIIFDEIHEMCPTILDSIKPMLDHHHEVDGVDYRNAIFIFISNIGGKEIATSL 224
Query: 178 LEL 180
L+L
Sbjct: 225 LDL 227
>gi|77681454|ref|NP_001029352.1| torsin family 2, member A precursor [Danio rerio]
gi|66910481|gb|AAH97170.1| Torsin family 2, member A [Danio rerio]
Length = 310
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 6/173 (3%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+++ LE L ++++GQ +A + A+ N QN + + L +S HG GTGK+ V+ I
Sbjct: 37 DIKGLEWDLYKNLYGQHMAQDIVSEAVVNFLQNE-NPDRPLVLSFHGSSGTGKSLVSSMI 95
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
I Y S ++H+F +HFP+ + V YR L + ++TAC R+IFIFDE+
Sbjct: 96 GRHI---YGTAMGSPYIHQFIPTLHFPSADRVLQYRSDLKRRVEKSLTACARSIFIFDEM 152
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF-LELRKS 183
+K P G++DV+ P + + + Q +++ I++F+S S G EI+N LE R++
Sbjct: 153 EKMPPGVIDVLEPHLGPYHILFQTNYRKAIYIFIS-SAGEEIVNRIALESRRA 204
>gi|260828917|ref|XP_002609409.1| hypothetical protein BRAFLDRAFT_86511 [Branchiostoma floridae]
gi|229294765|gb|EEN65419.1| hypothetical protein BRAFLDRAFT_86511 [Branchiostoma floridae]
Length = 429
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+++ L++ +K+H+HGQ L + + +H + +AL +S HG PG GK+YV
Sbjct: 147 PDIQRLDKTIKRHLHGQPLVHDIVVRYVTDHVDTKSPE-RALVMSFHGPPGVGKSYVGGM 205
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSL--YRLQLTNWIISNVTACDRAIFIF 128
I S+F D S V + H+P+ + S+ Y+ +L I + +C R +FIF
Sbjct: 206 IAESLFL---DGLNSPCVRLNIATKHYPHHDSHSIKGYKDKLHRLIPEAIRSCPRTLFIF 262
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DE DK P+ L+D I P++D V Q +F +FLFLSN+ I + F+ELRK
Sbjct: 263 DETDKMPESLIDAIKPYVDGSPVDGQ-NFNKAMFLFLSNTAAGTITDKFVELRKG 316
>gi|256075662|ref|XP_002574136.1| torsin A [Schistosoma mansoni]
gi|360043438|emb|CCD78851.1| putative torsin A [Schistosoma mansoni]
Length = 296
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N LE+ L +HGQ +A + L +H K LA+S HG G GKN+V++ I
Sbjct: 21 NKTSLEQSLSDELHGQHIAAERVYHHLVDHIAGG-SPQKPLALSFHGYTGVGKNFVSNII 79
Query: 72 VSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
V+++ + GT SRF H +++ IHF + + +S Y+ +L + + V+ C +IF+FDE
Sbjct: 80 VNNVLRL----GTRSRFYHFYDATIHFKHASRISEYKERLYQDLHTAVSECPTSIFVFDE 135
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+ P G+LD++ P ++ + F+ +IF+FLSN+GG I
Sbjct: 136 MHNMPHGILDILSPLLEVRETVEGVDFRKSIFIFLSNAGGNYI 178
>gi|301761632|ref|XP_002916243.1| PREDICTED: torsin-3A-like [Ailuropoda melanoleuca]
Length = 321
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + ++ + + + KALA+S HG GTGKN+V
Sbjct: 44 SNNFTGLESDLSVQLHGQHLARELVLMTVRGYLELPRPD-KALALSFHGWSGTGKNFVAR 102
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + +HFP+ +V LY+ +LT+ I C + +FIFD
Sbjct: 103 LLAENL---YRDGLRSDCVKTFIATLHFPHLKYVDLYKEKLTSQIKETQKRCRQTLFIFD 159
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P ++ A N ++ TIFLFLSN GG I L L ++
Sbjct: 160 EAEKLHPGLLEALRPHLERQAPENHRVESPKTIFLFLSNLGGNTINEAVLRLLQA 214
>gi|281351290|gb|EFB26874.1| hypothetical protein PANDA_004302 [Ailuropoda melanoleuca]
Length = 310
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + ++ + + + KALA+S HG GTGKN+V
Sbjct: 34 SNNFTGLESDLSVQLHGQHLARELVLMTVRGYLELPRPD-KALALSFHGWSGTGKNFVAR 92
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + +HFP+ +V LY+ +LT+ I C + +FIFD
Sbjct: 93 LLAENL---YRDGLRSDCVKTFIATLHFPHLKYVDLYKEKLTSQIKETQKRCRQTLFIFD 149
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P ++ A N ++ TIFLFLSN GG I L L ++
Sbjct: 150 EAEKLHPGLLEALRPHLERQAPENHRVESPKTIFLFLSNLGGNTINEAVLRLLQA 204
>gi|390352787|ref|XP_782768.3| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 391
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 1 EACTDKFIQSSNVRV-LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGL 59
E C + +I +N+ L+ L +++ GQ + + AL+ H N + K L +S HG
Sbjct: 82 ECCDEPWINVNNISSGLDNVLNENLFGQHIVKETVSAALQGHLLNP-NPPKPLVLSFHGR 140
Query: 60 PGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ I SI YK+ +S++VH + F + + Y+ L N + ++
Sbjct: 141 TGTGKNFVSRMIAESI---YKEGLSSKYVHLKIADRDFRHTTKFAEYKESLHNEVFNSAK 197
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
C R +FIFDEV+ P GLLD I PF+++ + + F IF+FLSN+ EI
Sbjct: 198 NCPRQLFIFDEVENMPPGLLDTIRPFLEYRSHLEGVQFNKAIFIFLSNTAAREI 251
>gi|260824824|ref|XP_002607367.1| hypothetical protein BRAFLDRAFT_205107 [Branchiostoma floridae]
gi|229292714|gb|EEN63377.1| hypothetical protein BRAFLDRAFT_205107 [Branchiostoma floridae]
Length = 267
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 6/171 (3%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ L + ++GQ L + A+++H + KALA+S HG G GK +VT I SI
Sbjct: 5 LKTLLTKRLYGQPLVRDVVIKAIQSHLTTPKPD-KALALSFHGSSGVGKTFVTTMIAKSI 63
Query: 76 FKRYKDKGTSRFVHKFNSRIHF--PNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
F + S +VH +++ + F +E H Y+ QL + I + V C A+FIFD VD+
Sbjct: 64 FTSGME---SPYVHYYSAEVDFKHTDEIHTREYKKQLRHDISTAVRRCQHAMFIFDHVDR 120
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
P+ L+D I PF++ + + I+F+ IF+ +S+S I+N ++LR E
Sbjct: 121 MPRDLIDTIKPFLEEYTRVDGINFRKAIFILISHSASDAIINMTMKLRSEE 171
>gi|332024093|gb|EGI64310.1| Torsin-like protein [Acromyrmex echinatior]
Length = 249
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 9/127 (7%)
Query: 54 ISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 113
+S HG PGTGKNYV I + YK+ S + H FN R FP + V Y+ +L
Sbjct: 1 MSFHGTPGTGKNYVVQMIAKAF---YKNGVQSNYFHFFNGRNDFPLQRKVDDYQEELYKI 57
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID----HHAVYNQIS-FQN-TIFLFLSN 167
I + + C+R++F+FDEVDK P+GLL+V++PF+D H + N S +QN IF+FLSN
Sbjct: 58 IFNGLQQCERSMFVFDEVDKMPEGLLNVLVPFLDYNNYHKSTKNSKSVYQNKAIFIFLSN 117
Query: 168 SGGTEIM 174
+G T+I+
Sbjct: 118 TGSTKIV 124
>gi|47227661|emb|CAG09658.1| unnamed protein product [Tetraodon nigroviridis]
Length = 292
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N++ LE L ++++GQ L + + QN+ + + L +S HG GTGK V+ +
Sbjct: 19 NIQDLEWDLYKNLYGQHLVQDIVSEEVAKFLQNK-NPDRPLVLSFHGPSGTGKTLVSQML 77
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+ + Y +S VH+F +HFP+ + V Y+ L +W+ N+T C R+IF FDE+
Sbjct: 78 GNHL---YGSAMSSPHVHQFVPTLHFPSTDRVKEYKEDLKSWVQGNLTKCARSIFFFDEM 134
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K P GL+DV+ PF+ V +++ I++F+ +G I LE R++
Sbjct: 135 EKMPPGLIDVLEPFLGPSHVMFGTNYRKAIYVFIGTTGEEVITRVALENRQA 186
>gi|149636313|ref|XP_001515683.1| PREDICTED: torsin-3A-like [Ornithorhynchus anatinus]
Length = 397
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N+ LE L +HGQ LA + A+++ F H KALA+S HG GTGKN+V
Sbjct: 122 NNITGLESDLSIRLHGQHLARHVVLKAVRD-FLALPHPEKALALSFHGWSGTGKNFVARM 180
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ ++ Y+D S V F S HFP+ +V LY+ QL I V C +A+F+FDE
Sbjct: 181 MADNL---YRDGLGSECVKVFISLFHFPHPRYVDLYQEQLKQHIGETVGRCRQALFVFDE 237
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGG---TEIMNTFLEL-RKSECI 186
+K LLD + ++ H + + IFLFLSN GG E++ +FL++ + E I
Sbjct: 238 AEKLHPSLLDTLKLYLHPHHSTKEQDCRRAIFLFLSNLGGNTINELVLSFLQMGQPREEI 297
Query: 187 EFIFQCQPLKVYL 199
QPL+ L
Sbjct: 298 TLESLEQPLRAEL 310
>gi|221112667|ref|XP_002158090.1| PREDICTED: torsin-1A-like [Hydra magnipapillata]
Length = 292
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++++Q+ ++ LE + V GQ L + A+ NH +N+ + L +S HG
Sbjct: 11 ECCNNQWLQTPSLSDLEHVINSEVFGQHLISKRVPAAIINHIENK-NPASPLVLSFHGGT 69
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK++V+ I +FK + S+FV + ++ N+N + Y+ QL+ I ++V
Sbjct: 70 GTGKSFVSQIIAEHLFK---NGVNSKFVRVIYATKNYTNKNMLEEYKNQLSKLIENSVKL 126
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTF 177
C+R +FI DE + P GL D I PF+D++ + + ++ +IF+FLSN+ +I+N +
Sbjct: 127 CERTLFIIDEFHEMPIGLGDSIAPFLDYNHQIDGVDYRKSIFIFLSNT-AEDIINNY 182
>gi|156548696|ref|XP_001602655.1| PREDICTED: torsin-like protein-like isoform 1 [Nasonia vitripennis]
gi|345486835|ref|XP_003425565.1| PREDICTED: torsin-like protein-like isoform 2 [Nasonia vitripennis]
Length = 337
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C +K + N+ L+ + + GQ +A + + A+ +H + + K L +S HG
Sbjct: 34 ECCDNKRV-PYNLPKLKSMISMRLQGQHIAENVVLNAINSHVKK---SKKPLVMSFHGAN 89
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
G GK YV+ I + FK+ ++ SRF H + +FPN+ V Y+ QL + I + + +
Sbjct: 90 GVGKTYVSRMIAKAFFKKGEN---SRFFHFYYGLQNFPNKEKVLEYQTQLKSDIEAALHS 146
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
C+R++F+FD VD+ P LLD ++PFID ++ +IF+FL+N+G + I L
Sbjct: 147 CERSLFVFDGVDQMPSQLLDALMPFIDCPNCAGKLDKNKSIFIFLTNTGSSAIEKQLL 204
>gi|440901223|gb|ELR52204.1| Torsin-3A [Bos grunniens mutus]
Length = 402
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 5/174 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V
Sbjct: 124 NNFTGLEADLRVRLHGQHLARELVLMAVRGYLE-KPRPDKALALSFHGWSGTGKNFVARM 182
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ ++ Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE
Sbjct: 183 LAENL---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDE 239
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K GLL+ + P ++ A N + + TIFLFLSN GG I L L K+
Sbjct: 240 AEKLHPGLLEALRPHLERQAPNNHRAESKRTIFLFLSNLGGNIINEVVLNLLKA 293
>gi|432116011|gb|ELK37150.1| Torsin-3A [Myotis davidii]
Length = 408
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N L+ L +HGQ LA + +K++ + + KALA+S HG GTGKN+V
Sbjct: 131 SNNFTGLQSDLSVRLHGQHLAQELVLTTVKSYLELPRPD-KALALSFHGWSGTGKNFVAR 189
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + IHFP+ +V LY+ QLT + C + +FIFD
Sbjct: 190 LLAENL---YRDGLRSDCVKVFITMIHFPHPQYVDLYKEQLTEQVRKTQEHCHQTLFIFD 246
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P ++ + N + TIFLFLSN GG I L L K+
Sbjct: 247 EAEKLHPGLLEALGPHLERQVLENHRAESSRTIFLFLSNLGGNVINEVVLGLLKA 301
>gi|410922511|ref|XP_003974726.1| PREDICTED: torsin-2A-like [Takifugu rubripes]
Length = 311
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 100/183 (54%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
++C F N++ LE L ++++GQ L + + QN+ + + L +S +G
Sbjct: 29 DSCNCDF--KPNIKGLEWDLYRNLYGQHLVQDIVSEEVAKFLQNK-NPDRPLVLSFNGPS 85
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK V+ + + + Y +S +VH+F +HFP + V YR L +W+ N+T
Sbjct: 86 GTGKTLVSSMLGNHL---YGSAMSSPYVHQFVPTLHFPLPDRVKQYREDLKSWVQGNLTE 142
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R++F FDE++K P G++DV+ PF+ V + +++ I++F+ +G I LE
Sbjct: 143 CARSVFFFDEMEKMPPGVVDVLEPFLGPSHVVFRTNYRKAIYVFIGTTGEEVITRVALEN 202
Query: 181 RKS 183
R++
Sbjct: 203 RQA 205
>gi|344278493|ref|XP_003411028.1| PREDICTED: torsin-3A-like [Loxodonta africana]
Length = 533
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + A++++ + KALA+S HG GTGKN+V
Sbjct: 256 SNNFTGLESDLSVRLHGQHLAQELVLRAVRSYIET-PQPGKALALSFHGWSGTGKNFVAR 314
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ +V LY+ QL++ I C + +FIFD
Sbjct: 315 MLAENL---YRDGLRSDCVQVFIAMFHFPHPKYVDLYKEQLSSQIQETQQRCHQTLFIFD 371
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P ++ A + TIFLFLSN GG I L L K+
Sbjct: 372 EAEKLHPGLLEALEPHLERRAPKGHRAKTPRTIFLFLSNLGGNIINEVVLNLLKA 426
>gi|426239956|ref|XP_004013882.1| PREDICTED: torsin-3A [Ovis aries]
Length = 402
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V +
Sbjct: 125 NFTGLEADLRVRLHGQHLARELVLTAVRGYLEMPRPD-KALALSFHGWSGTGKNFVARML 183
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE
Sbjct: 184 AENL---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDEA 240
Query: 132 DKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K GLL+ + P ++ A N + + TIFLFLSN GG I L L K+
Sbjct: 241 EKLHPGLLEALRPHLERQAPSNRRAESKRTIFLFLSNLGGNIINEVVLNLLKA 293
>gi|122692331|ref|NP_001073845.1| torsin-3A precursor [Bos taurus]
gi|119224063|gb|AAI26734.1| Torsin family 3, member A [Bos taurus]
gi|296479036|tpg|DAA21151.1| TPA: torsin family 3, member A [Bos taurus]
Length = 402
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N L+ L+ +HGQ LA + A++++ + + KALA+S HG GTGKN+V
Sbjct: 124 NNFTGLKADLRVRLHGQHLARELVLTAVRDYLE-KPRPDKALALSFHGWSGTGKNFVARM 182
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ ++ Y+D S V F S +HFP+ +V LY +LT+ I C + +FI DE
Sbjct: 183 LAENL---YQDGLRSDCVKVFISTLHFPHPKNVDLYEEELTDKIRKTQEHCRQTLFILDE 239
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K GLL+ + P ++ A N + + TIFLFLSN GG I L L K+
Sbjct: 240 AEKLHPGLLEALRPHLERQAPNNHRAESKRTIFLFLSNLGGNIINEVVLNLLKA 293
>gi|332219696|ref|XP_003258994.1| PREDICTED: torsin-3A [Nomascus leucogenys]
Length = 400
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 123 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 181
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V S+ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 182 MLVESL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLTGQIRGTQQLCRQTLFIFD 238
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 239 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 293
>gi|410985984|ref|XP_003999294.1| PREDICTED: uncharacterized protein LOC101084414 [Felis catus]
Length = 746
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ L L +HGQ LA + A++ + + + KALA+S HG GTGKN+V
Sbjct: 469 SNNLTGLASDLSVRLHGQHLARELVLTAVRGYLEPPQPH-KALALSFHGWSGTGKNFVAR 527
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ +V LY+ QLT+ I C + +FIFD
Sbjct: 528 LLAENL---YRDGLRSDCVKVFIATFHFPHPKYVDLYQEQLTSQIRKTQERCPQTLFIFD 584
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLEL 180
E +K GLL+ + ++ A N ++ TIFLFLSN GG+ I L L
Sbjct: 585 EAEKLHPGLLEALRSHLEAQAPENHRVESPRTIFLFLSNLGGSVINEAVLNL 636
>gi|355746139|gb|EHH50764.1| hypothetical protein EGM_01639, partial [Macaca fascicularis]
Length = 309
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 33 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETSQPD-KALALSFHGWSGTGKNFVAR 91
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 92 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 148
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + F TIFLFLSN G I L+L K+
Sbjct: 149 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKA 203
>gi|344239918|gb|EGV96021.1| Torsin-3A [Cricetulus griseus]
Length = 397
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLESDLRVRLHGQHLASKLVPRAVRGYLEMPQVD-KALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F S HFP+ HV +Y+ +L + C +++FIFD
Sbjct: 179 MLAENL---YRDGMRSDCVKMFISTFHFPHTKHVDMYKEELRWQMQETWRRCHQSMFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+++ P ++ Q + IFLFLSN GG+ I L L K+
Sbjct: 236 EAEKLHPGLLELLGPHLEPRVPEAQDMEPPRPIFLFLSNLGGSVISKEVLSLLKA 290
>gi|354490764|ref|XP_003507526.1| PREDICTED: torsin-3A-like [Cricetulus griseus]
Length = 425
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V
Sbjct: 148 SNNFTGLESDLRVRLHGQHLASKLVPRAVRGYLEMPQVD-KALALSFHGWSGTGKNFVAR 206
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F S HFP+ HV +Y+ +L + C +++FIFD
Sbjct: 207 MLAENL---YRDGMRSDCVKMFISTFHFPHTKHVDMYKEELRWQMQETWRRCHQSMFIFD 263
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQ-ISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+++ P ++ Q + IFLFLSN GG+ I L L K+
Sbjct: 264 EAEKLHPGLLELLGPHLEPRVPEAQDMEPPRPIFLFLSNLGGSVISKEVLSLLKA 318
>gi|402857985|ref|XP_003893513.1| PREDICTED: torsin-3A [Papio anubis]
Length = 402
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 125 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 183
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 184 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 240
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + F TIFLFLSN G I L+L K+
Sbjct: 241 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKA 295
>gi|380794437|gb|AFE69094.1| torsin-3A precursor, partial [Macaca mulatta]
Length = 375
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 98 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 156
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 157 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 213
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + F TIFLFLSN G I L+L K+
Sbjct: 214 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKA 268
>gi|355558986|gb|EHH15766.1| hypothetical protein EGK_01902, partial [Macaca mulatta]
Length = 403
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 126 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 184
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 185 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 241
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + F TIFLFLSN G I L+L K+
Sbjct: 242 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKA 296
>gi|388454480|ref|NP_001252599.1| torsin-3A precursor [Macaca mulatta]
gi|387542060|gb|AFJ71657.1| torsin-3A precursor [Macaca mulatta]
Length = 402
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 125 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 183
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 184 MLVENL---YRDGLMSDCVRMFIATFHFPHRKYVDLYKEQLMGQIRETQQLCHQTLFIFD 240
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + F TIFLFLSN G I L+L K+
Sbjct: 241 EAEKLHPGLLEVLEPHLERRAPEGHRAEFTWTIFLFLSNLRGDIINEVVLKLLKA 295
>gi|355725652|gb|AES08626.1| torsin family 3, member A [Mustela putorius furo]
Length = 342
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + +K + + KALA+S HG GTGKN+V
Sbjct: 65 SNNFTGLESDLSVRLHGQHLARELVLTTVKGYLEVP-QPGKALALSFHGWSGTGKNFVAR 123
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + +HFP+ ++ LY +LT+ I C + +FIFD
Sbjct: 124 LLAENL---YRDGLRSNCVKTFIATLHFPHPKYMDLYEEKLTSEIKETQEHCHQTLFIFD 180
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P + N ++ TIFLFLSN GG I L L ++
Sbjct: 181 EAEKLHPGLLEALGPHLAQQTPKNHRVESPKTIFLFLSNLGGNTINAAVLNLLQA 235
>gi|297662628|ref|XP_002809799.1| PREDICTED: torsin-3A [Pongo abelii]
Length = 397
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVRQLVLRTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMGQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++H A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLEHRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|335295791|ref|XP_003130388.2| PREDICTED: torsin-3A [Sus scrofa]
Length = 404
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 5/174 (2%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N LE L+ +HGQ LA + A++ + + KALA+S HG GTGKN++
Sbjct: 128 NNFTGLEADLRVRLHGQHLARELVLAAVRGYLE-LPQPDKALALSFHGSSGTGKNFMARL 186
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ ++F+ D S V F + +HFP+ +V Y+ QLT I C + +FI DE
Sbjct: 187 LAENLFR---DGLRSNCVQVFIATLHFPHPKYVDQYKEQLTGQIRKTQERCHQTLFILDE 243
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+K LL+V+ P +D + N + +IFLFLSN GG+ I L+L K
Sbjct: 244 AEKLHPELLEVLGPQLDRQTLENHRAKSPRSIFLFLSNLGGSVINEVVLDLLKG 297
>gi|328701743|ref|XP_003241698.1| PREDICTED: torsin-like protein-like [Acyrthosiphon pisum]
Length = 341
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGT 62
C KF ++ LE +K GQ +A + AL + N K + + G GT
Sbjct: 61 CPKKF----EIKDLELDMKNSFFGQHIASKIVISALAGNLHRSKKNKKPIVMCFQGSSGT 116
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKN+++D I S +F K + + H N + FP ++ ++ Y+ +L + + S + +CD
Sbjct: 117 GKNFLSDLIASHMFNSTKSR--KKRYHVINGQTAFPLQSKINDYKEKLYSDVKSAIKSCD 174
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
+F+FDE+ P G+LD++ P ++++ V I +N+IF+FL+N+G I+ +L+L
Sbjct: 175 TNLFVFDEIHYIPMGILDILGPILENNDV--SIDSRNSIFIFLTNTGYNPILQKYLDL 230
>gi|403265630|ref|XP_003925027.1| PREDICTED: torsin-3A-like [Saimiri boliviensis boliviensis]
Length = 400
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 123 SNNFTGLEWDLNVRLHGQHLVRQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 181
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 182 MLAENL---YRDGLRSDCVRMFIATIHFPHSKYVDLYKEQLKGQIRETQQLCHQTLFIFD 238
Query: 130 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K
Sbjct: 239 EAEKLHPGLLEVLGPHLERRAPEDDRAESPWTIFLFLSNLRGDIINEVVLKLLK 292
>gi|328701741|ref|XP_001946113.2| PREDICTED: torsin-like protein-like [Acyrthosiphon pisum]
Length = 339
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 72
++ LE +K+ GQ +A + AL + +N K L +S HG G+GKN+++D I
Sbjct: 63 IKDLEHDMKKSFFGQHIASKIVVSALAGNLHRSRNNKKPLVMSFHGSTGSGKNFLSDLIA 122
Query: 73 SSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 132
+F K K R+ H + R FP ++ ++ Y+ +L + + S + +C +F+FDE+
Sbjct: 123 KHMFNSEKVKEL-RY-HVIHGRSKFPLQSKINDYKEKLYSDVKSAIKSCATNLFVFDEIH 180
Query: 133 KFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
P G+LD++ P ++++ V + +N+IF+FL+N+G I+ +L+L
Sbjct: 181 YIPMGILDILTPILENNDV--SVDSRNSIFIFLTNTGSDSIIKKYLDL 226
>gi|296229692|ref|XP_002760440.1| PREDICTED: torsin-3A [Callithrix jacchus]
Length = 375
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 121 SNNFTGLEWDLNVRLHGQHLVQQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 179
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 180 MLAENL---YRDGLRSDCVRMFIATIHFPHPKYVDLYKEQLKGQIREMQQLCYQTLFIFD 236
Query: 130 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K
Sbjct: 237 EAEKLHPGLLEVLGPPLERRAPEDDRADSPWTIFLFLSNLRGDRINEVVLKLLK 290
>gi|403266646|ref|XP_003925479.1| PREDICTED: torsin-3A [Saimiri boliviensis boliviensis]
Length = 495
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + + KALA+S HG GTGKN+V
Sbjct: 218 SNNFTGLEWDLNVRLHGQHLVRQLVLSTVRGYLETPQPD-KALALSFHGWSGTGKNFVAR 276
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + IHFP+ +V LY+ QL I C + +FIFD
Sbjct: 277 MLAENL---YRDGLRSDCVRMFIATIHFPHSKYVDLYKEQLKGQIRETQQLCHQTLFIFD 333
Query: 130 EVDKFPKGLLDVIIPFIDHHAVY-NQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
E +K GLL+V+ P ++ A ++ TIFLFLSN G I L+L K
Sbjct: 334 EAEKLHPGLLEVLGPHLERRAPEDDRAESPWTIFLFLSNLRGDIINEVVLKLLK 387
>gi|194210338|ref|XP_001494497.2| PREDICTED: torsin-3A-like [Equus caballus]
Length = 559
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N L+ L +HGQ LA + ++ + + KAL +S HG GTGKN+V
Sbjct: 282 SNNFTGLKSDLSVRLHGQHLAQELVLRTVRGYLE-LPRPEKALVLSFHGWSGTGKNFVAR 340
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ V LY+ QLT I C + +FIFD
Sbjct: 341 MLAENL---YRDGLRSDCVKVFIAMFHFPHPTSVDLYKEQLTGQIRKTQERCHQTLFIFD 397
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+ + P + A N + +IFLFLSN GG+ I L L K+
Sbjct: 398 EAEKLHPGLLEALRPHLGRQAPENHRAQSPRSIFLFLSNLGGSVINEVVLRLLKA 452
>gi|397508629|ref|XP_003824752.1| PREDICTED: torsin-3A [Pan paniscus]
Length = 403
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 126 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 184
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 185 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 241
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 242 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 296
>gi|114568181|ref|XP_514028.2| PREDICTED: torsin-3A isoform 4 [Pan troglodytes]
gi|410288304|gb|JAA22752.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|426332882|ref|XP_004028021.1| PREDICTED: torsin-3A isoform 1 [Gorilla gorilla gorilla]
Length = 397
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|10438692|dbj|BAB15312.1| unnamed protein product [Homo sapiens]
gi|12654511|gb|AAH01085.1| Torsin family 3, member A [Homo sapiens]
gi|14043167|gb|AAH07571.1| Torsin family 3, member A [Homo sapiens]
gi|15079904|gb|AAH11746.1| Torsin family 3, member A [Homo sapiens]
gi|48146825|emb|CAG33635.1| TOR3A [Homo sapiens]
gi|119611444|gb|EAW91038.1| torsin family 3, member A, isoform CRA_b [Homo sapiens]
gi|119611445|gb|EAW91039.1| torsin family 3, member A, isoform CRA_b [Homo sapiens]
Length = 397
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|115647957|ref|NP_071766.2| torsin-3A precursor [Homo sapiens]
gi|74752636|sp|Q9H497.1|TOR3A_HUMAN RecName: Full=Torsin-3A; AltName: Full=ATP-dependent
interferon-responsive protein; AltName: Full=Torsin
family 3 member A; Flags: Precursor
gi|10862826|emb|CAC13973.1| ADIR1 [Homo sapiens]
gi|17921998|emb|CAC88129.1| ADIR1 [Homo sapiens]
Length = 397
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|426332884|ref|XP_004028022.1| PREDICTED: torsin-3A isoform 2 [Gorilla gorilla gorilla]
Length = 336
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|410247796|gb|JAA11865.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + T+FLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTVFLFLSNLRGDIINEVVLKLLKA 290
>gi|17921999|emb|CAC88130.1| ADIR2 [Homo sapiens]
Length = 336
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|11061449|emb|CAC14461.1| ADIR2 [Homo sapiens]
Length = 336
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|119611443|gb|EAW91037.1| torsin family 3, member A, isoform CRA_a [Homo sapiens]
Length = 336
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>gi|410216688|gb|JAA05563.1| torsin family 3, member A [Pan troglodytes]
gi|410330083|gb|JAA33988.1| torsin family 3, member A [Pan troglodytes]
Length = 397
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + T+FLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTVFLFLSNLRGDIINEVVLKLIKA 290
>gi|313231642|emb|CBY08755.1| unnamed protein product [Oikopleura dioica]
gi|313246883|emb|CBY35738.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 59
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNSRWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 60 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 118
G GKNY+T + +S+F +GT S F+H S +HF +++++ + QL +WI N
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKTHISQLQSWIEGNS 156
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
T C +F+FDE +FP GL D ++ F+ H + + +IF+FL
Sbjct: 157 TICGEHLFVFDEARRFPSGLFDGLLHFMAHGSPAAK-RLGRSIFVFL 202
>gi|193786330|dbj|BAG51613.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 66/93 (70%)
Query: 91 FNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHA 150
F + +HFP+ ++++LY+ QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++
Sbjct: 101 FVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYD 160
Query: 151 VYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+ + +S+Q +F+FLSN+G I + L+ +S
Sbjct: 161 LVDGVSYQKAMFIFLSNAGAERITDVALDFWRS 193
>gi|444730478|gb|ELW70860.1| Torsin-3A, partial [Tupaia chinensis]
Length = 375
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + ++ + + +ALA+S HG GTGKN++
Sbjct: 34 SNNFAGLESDLSVRLHGQHLARELVLRTVRGYLETPL-PARALALSFHGWSGTGKNFMAR 92
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ +V LY+ +L I C + +FIFD
Sbjct: 93 MLAENL---YRDGLRSDCVKMFIATFHFPHPKYVDLYQERLAAQIQETRQRCHQTLFIFD 149
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ ++ + Q TIFLFLSN GG I L L K+
Sbjct: 150 EAEKLHPGLLEVLGAHLERQVPKSHQTKASRTIFLFLSNLGGNAINEVVLNLLKA 204
>gi|60551279|gb|AAH91041.1| MGC107954 protein [Xenopus (Silurana) tropicalis]
Length = 295
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ L L + +HGQ +A I L+ Q+ K LA+S HG GTGKN
Sbjct: 23 TNNLTGLRWDLGRRLHGQHVAEGLILTYLERFLQH-GEPLKPLALSFHGWTGTGKNLAAR 81
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
I ++ Y D SR + F ++HFP+ +HV Y++QL N I + C + +F+FD
Sbjct: 82 IIAENL---YLDSQRSRCIRVFIPQLHFPHLSHVEAYKVQLENQIREVSSRCPQPLFVFD 138
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
E DK PKGLL I F+ + S ++IFLFLS+ G I
Sbjct: 139 EADKIPKGLLSSIRLFLSS----GKQSQSHSIFLFLSSMGSNAI 178
>gi|431915974|gb|ELK16228.1| Torsin-3A [Pteropus alecto]
Length = 435
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N LE L+ +HGQ LA + ++++ + + KALA+S HG GTGKN+V
Sbjct: 158 TNNFTGLESDLRVCLHGQHLAQELVLTTVRSYLELPRPD-KALALSFHGWSGTGKNFVAR 216
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + +HFP+ + LY+ LT+ + C + +F+FD
Sbjct: 217 MLAENL---YRDGLRSDCVKLFITTLHFPHSKDLDLYKEWLTDQMRETQEHCHQTLFVFD 273
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLEL 180
E +K GLL+ + P ++ A N + TIFLFLSN GG+ I L L
Sbjct: 274 EAEKLHPGLLEALGPHLELQAPDNLRAEPPRTIFLFLSNLGGSVINEVVLRL 325
>gi|17390689|gb|AAH18292.1| Torsin family 3, member A [Homo sapiens]
gi|312151316|gb|ADQ32170.1| torsin family 3, member A [synthetic construct]
Length = 397
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLF SN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFPSNLRGDIINEVVLKLLKA 290
>gi|349732199|ref|NP_001025592.2| torsin-3A precursor [Xenopus (Silurana) tropicalis]
Length = 389
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
++N+ L L + +HGQ +A I L+ Q+ K LA+S HG GTGKN
Sbjct: 117 TNNLTGLRWDLGRRLHGQHVAEGLILTYLERFLQHG-EPLKPLALSFHGWTGTGKNLAAR 175
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
I ++ Y D SR + F ++HFP+ +HV Y++QL N I + C + +F+FD
Sbjct: 176 IIAENL---YLDSQRSRCIRVFIPQLHFPHLSHVEAYKVQLENQIREVSSRCPQPLFVFD 232
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
E DK PKGLL I F+ + S ++IFLFLS+ G I
Sbjct: 233 EADKIPKGLLSSIRLFLSS----GKQSQSHSIFLFLSSMGSNAI 272
>gi|260811011|ref|XP_002600216.1| hypothetical protein BRAFLDRAFT_203955 [Branchiostoma floridae]
gi|229285502|gb|EEN56228.1| hypothetical protein BRAFLDRAFT_203955 [Branchiostoma floridae]
Length = 249
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
VL+ +++ +HGQ A + + +H ++ KA+ +S HG G GKNY++ I +
Sbjct: 12 VLDTTIQKKLHGQPFARKVVVDVITSHVKSS-DPRKAMVLSFHGPRGVGKNYLSTMIAQA 70
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNE--NHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 132
+ Y D TS V +++ HF + N+V Y L I S V C RA+ IFDE++
Sbjct: 71 L---YADGMTSSCVRGYSATRHFKHHDLNNVRNYMDMLHEEIPSLVRRCPRALIIFDEME 127
Query: 133 KFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSECIE 187
K P L+D I PF++ + + ++ IF+ LSNS I L LR+ + +E
Sbjct: 128 KMPGQLIDTIKPFVEESEAVDGVDYRKAIFILLSNSAQGLIEEQTLLLRRDKSLE 182
>gi|313222418|emb|CBY39342.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 59
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNARWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 60 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 118
G GKNY+T + +S+F +GT S F+H S +HF +++++ ++ +L +WI N
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKVHISKLQSWIEGNS 156
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
T C +F+FDE +FP GL D ++ F+ H + + +IF+FL
Sbjct: 157 TICGEHLFVFDEARRFPSGLFDGLLHFMAHGSPAAK-RLGRSIFVFL 202
>gi|405968696|gb|EKC33742.1| Torsin-1A [Crassostrea gigas]
Length = 193
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 47 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 106
+ +KAL +S HG GTGKNYV+ I SI YK+ S++VH ++ FP+++ V LY
Sbjct: 33 YPSKALTLSFHGGTGTGKNYVSKIIAESI---YKEGMRSKYVHLISATKEFPHKDMVPLY 89
Query: 107 RLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH 149
+ +L N + S+V C +++FIFDE+DK P G+LD + P+ D +
Sbjct: 90 KDKLRNLVESSVNECPQSLFIFDEIDKMPAGILDTLKPYFDFY 132
>gi|348578439|ref|XP_003474990.1| PREDICTED: torsin-3A-like [Cavia porcellus]
Length = 433
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S++ L+ L +HGQ LA + ++ + + + KALA+S HG GTGKN+V
Sbjct: 156 SNDFSGLDSDLSVRLHGQHLARELVFRTVRGYLEMPQPD-KALALSFHGWSGTGKNFVAR 214
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + IHFP+ +V LY+ LT+ I C +++FIFD
Sbjct: 215 MVAENL---YRDGLKSDCVKVFITTIHFPHSKYVDLYKELLTDQIKQVQQRCHQSLFIFD 271
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K LL+++ P ++ A+ + IFLFLSN GG I L L K+
Sbjct: 272 EAEKLHPELLELLGPHLERQALEGHRTKSPRAIFLFLSNLGGNVINKVVLNLLKA 326
>gi|291397288|ref|XP_002715083.1| PREDICTED: torsin A-like [Oryctolagus cuniculus]
Length = 277
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ L +HGQ LA + +K + + + KALA+S HG GTGKN+V + ++
Sbjct: 6 LDSDLSGRLHGQHLARELVLRTVKGYLEVPRPD-KALALSFHGWSGTGKNFVARMLAENL 64
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
Y+D S V + IHFP+ +V LY+ QL I C + +FIFDE +K
Sbjct: 65 ---YRDGQRSACVRMLIATIHFPHPKYVDLYKEQLMAQIRETQQRCRQTLFIFDEAEKLH 121
Query: 136 KGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLE 179
LL+++ P ++ A + + +IF+FLSN GG I LE
Sbjct: 122 PELLELLGPHLERRAPGDARAGPPRSIFVFLSNLGGNVINELVLE 166
>gi|449682279|ref|XP_002159956.2| PREDICTED: torsin-1B-like [Hydra magnipapillata]
Length = 352
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 31/175 (17%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+++ ++ LE++L + V GQ LA I A+K+H +N+ + L +S HG
Sbjct: 94 ECCNDQWL-IQDLSGLEKELNEKVFGQHLANKLISKAVKSHIKNKDPKS-PLVMSFHGWT 151
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGK +V+ + +S+FK+ +L I N
Sbjct: 152 GTGKTFVSQIVANSLFKKD-----------------------------ELIELIQKNSEQ 182
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R +F+FDE P+GL DV+ PF+D+HA + ++ IF+FLSN G I N
Sbjct: 183 CHRMLFVFDEFHFMPEGLSDVMTPFLDYHAAVDGRDYRKNIFIFLSNVAGDMINN 237
>gi|41053623|ref|NP_957150.1| torsin A precursor [Danio rerio]
gi|38541235|gb|AAH62843.1| Zgc:77727 [Danio rerio]
Length = 328
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 67
+++ N L+ L Q + GQ + + A+ + + N K L +S HG GTGKN+V
Sbjct: 52 LRTFNPAGLKSDLGQALFGQHIVSDVVLKAVSSFMADSNPN-KPLVLSFHGTAGTGKNHV 110
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ I +++ + ++ S+ VH F PN Y + L +I ++V R+ FI
Sbjct: 111 SKIIARNLYTKGEN---SKHVHTFIYDNQDPNA-----YSVWLKQFIHTSVENFPRSTFI 162
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL----ELRKS 183
FDE+DK ++DVI PF+D++A N +SF IF+FLSN+GG I + L E RK
Sbjct: 163 FDEMDKMQPQVIDVIKPFLDYNAHVNGVSFHKAIFIFLSNTGGKVIADLALDFWREGRKR 222
Query: 184 ECIEF 188
E I+
Sbjct: 223 EEIKM 227
>gi|351714590|gb|EHB17509.1| Torsin-3A, partial [Heterocephalus glaber]
Length = 384
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S++ L+ L +HGQ LA + + ++ + + + KALA+S HG GTGKN+V
Sbjct: 110 SNDFSGLDSDLSVRLHGQHLAQALVVRTVRGYLEMPQPD-KALALSFHGWSGTGKNFVAR 168
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ +L++ I C +++F+FD
Sbjct: 169 MLVENL---YQDGLKSDCVKVFIASFHFPHPKYVDLYK-RLSDQIQGTQQRCHQSLFMFD 224
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K LL+++ P ++ A + TIFLFLSN GG I L L K+
Sbjct: 225 EAEKLHPELLELLGPHLERWAPEGHRTESPRTIFLFLSNLGGNVINEVVLNLLKA 279
>gi|395825266|ref|XP_003785859.1| PREDICTED: torsin-3A [Otolemur garnettii]
Length = 402
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ LA + ++ + K LA+ HG GTGKN+V
Sbjct: 125 SNNFTGLESDLNVRLHGQHLARELVLRTVRGYLAMP-RPEKPLALLFHGWSGTGKNFVAR 183
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ Y+D S V F + HFP+ +V LY+ QLT I C + +FIFD
Sbjct: 184 MLAENL---YRDGLRSDCVRMFIAMFHFPHPKYVDLYKEQLTGQIQETQQLCPQTLFIFD 240
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K LL+V+ +++H + IFLFLSN G I L L KS
Sbjct: 241 EAEKLHPELLEVLGQYLEHSVPEGHKAKPPRAIFLFLSNLRGNIINEVVLNLLKS 295
>gi|292627322|ref|XP_001345255.3| PREDICTED: torsin-1A-like [Danio rerio]
Length = 263
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 4/137 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+ + LEE L + GQ +A + + ++ + + N K L +S HG GTGKN+VT +
Sbjct: 46 DPKRLEEDLNDFLFGQHIASNVVLKSVSSFMTDSKPN-KPLVLSFHGTTGTGKNHVTKIL 104
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
+I+K+ ++ S+ V ++ HFP + + LY QL WI NV++ R++FIFDE+
Sbjct: 105 ARNIYKKGEE---SKHVQIYDLEHHFPQRSKIDLYSAQLKQWIHGNVSSFPRSMFIFDEM 161
Query: 132 DKFPKGLLDVIIPFIDH 148
++ L+DV+ PF+D+
Sbjct: 162 EEMQPELIDVLKPFLDY 178
>gi|339235107|ref|XP_003379108.1| torsin-1A [Trichinella spiralis]
gi|316978291|gb|EFV61298.1| torsin-1A [Trichinella spiralis]
Length = 291
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
GKNYV+ FI SI+K Y K T FV F HFP+ V +Y+ QL WI NV+ C
Sbjct: 41 GKNYVSQFIAESIYK-YGMKST--FVRYFIGGYHFPDRKLVDVYKQQLREWIKGNVSTCQ 97
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNT 160
++FIFDEVD+ P G+LD I PF+++ + + + F +
Sbjct: 98 YSLFIFDEVDRMPPGVLDAIKPFLEYTQMVDGVDFTKS 135
>gi|74186394|dbj|BAE42964.1| unnamed protein product [Mus musculus]
Length = 385
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 108 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>gi|74213111|dbj|BAE41695.1| unnamed protein product [Mus musculus]
Length = 385
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 108 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>gi|57527353|ref|NP_001009683.1| torsin-3A precursor [Rattus norvegicus]
gi|81883141|sp|Q5M936.1|TOR3A_RAT RecName: Full=Torsin-3A; AltName: Full=Torsin family 3 member A;
Flags: Precursor
gi|56585058|gb|AAH87678.1| Torsin family 3, member A [Rattus norvegicus]
Length = 395
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 118 SNNFTGLESDLRVRLHGQHLASKLVLEAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 176
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F S HFP+ +V LY+ L + C ++ F+FD
Sbjct: 177 MLVDNL---YRDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFD 233
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFL LSN GG+ I L L K+
Sbjct: 234 EAEKLHPGLLELLEPYLEPRSPETHGAELPRAIFLLLSNLGGSVINEVVLGLLKA 288
>gi|196016674|ref|XP_002118188.1| hypothetical protein TRIADDRAFT_33759 [Trichoplax adhaerens]
gi|190579237|gb|EDV19337.1| hypothetical protein TRIADDRAFT_33759 [Trichoplax adhaerens]
Length = 369
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQ--NRYHNTKALAISLHGLPGTGKNYVTDFIVS 73
L ++ KQHV GQ+LA+ I L +H ++ + KAL +S HG GTGK V +
Sbjct: 76 LTKEWKQHVFGQDLALKIIRNMLTSHLVRISKKTSKKALVLSFHGGVGTGKTLVAKLLAK 135
Query: 74 SIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ YK+ +S +V + + + N N + + +L I V +C R + +F+EVDK
Sbjct: 136 VL---YKNGLSSSYVRRIHLKDFLTNLN-MDGKKHKLKTEIKRFVQSCTRPLVLFEEVDK 191
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
G++D + P+ D +V N +S+ NTIF+F SN EI
Sbjct: 192 LEAGVIDALSPYFDESSVDN-VSYANTIFIFTSNYASREI 230
>gi|74142399|dbj|BAE31955.1| unnamed protein product [Mus musculus]
gi|74181600|dbj|BAE30065.1| unnamed protein product [Mus musculus]
Length = 385
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN++
Sbjct: 108 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFLAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVGTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>gi|12857398|dbj|BAB30998.1| unnamed protein product [Mus musculus]
Length = 380
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN++
Sbjct: 101 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFLAR 159
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 160 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 216
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 217 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 271
>gi|224809275|ref|NP_075630.2| torsin-3A precursor [Mus musculus]
gi|90101789|sp|Q9ER38.2|TOR3A_MOUSE RecName: Full=Torsin-3A; AltName: Full=ATP-dependent
interferon-responsive protein; AltName: Full=Torsin
family 3 member A; Flags: Precursor
gi|12841607|dbj|BAB25279.1| unnamed protein product [Mus musculus]
gi|12844645|dbj|BAB26443.1| unnamed protein product [Mus musculus]
gi|48734896|gb|AAH71216.1| Tor3a protein [Mus musculus]
gi|74214616|dbj|BAE31149.1| unnamed protein product [Mus musculus]
gi|74220137|dbj|BAE31256.1| unnamed protein product [Mus musculus]
Length = 385
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN++
Sbjct: 108 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFLAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>gi|74212660|dbj|BAE31066.1| unnamed protein product [Mus musculus]
Length = 384
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN++
Sbjct: 107 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFLAR 165
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 166 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 222
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 223 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 277
>gi|390364077|ref|XP_781343.3| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 275
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 34 ICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKG--TSRFVHKF 91
+ GA+ H N + K L +SLHG GTGKN+++ +V +++ + G T R
Sbjct: 3 VLGAIDGHVTNP-NPPKPLVLSLHGPAGTGKNHISRLVVENLYTNGMESGCVTVRM---- 57
Query: 92 NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAV 151
S + +P+ + + Y+ +L +I S V+ C +FIFDEV+ P GLLD + F+DHH
Sbjct: 58 -STMDYPHHDDIYHYKEKLVPFIKSKVSECHNHLFIFDEVENMPPGLLDSMRSFLDHHTK 116
Query: 152 YNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + ++ I +F S I E
Sbjct: 117 VDGVDYRKVIVIFRSKLAAQAINKYMFE 144
>gi|10862867|emb|CAC13978.1| ADIR1 [Mus musculus]
Length = 385
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 108 SNNLTGLESDLCVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>gi|444517775|gb|ELV11789.1| Torsin-1A [Tupaia chinensis]
Length = 194
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
QL WI NV+AC R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+
Sbjct: 12 QLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNA 71
Query: 169 GGTEIMNTFLELRKS 183
G I + L+ +S
Sbjct: 72 GAERITDVALDFWRS 86
>gi|225712262|gb|ACO11977.1| Torsin-1B precursor [Lepeophtheirus salmonis]
Length = 209
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 95 IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ 154
IHFP + Y+ +L WI N+T C R++F+FDE+DK P ++D I PF+D H +
Sbjct: 11 IHFPIPSQNYEYKAKLQQWIKGNITICSRSVFVFDEIDKMPPHVIDGIKPFLDFHEDVDS 70
Query: 155 ISFQNTIFLFLSNSGGTEI 173
I + IF+F+SN+GG +I
Sbjct: 71 IDCRKAIFIFISNTGGKKI 89
>gi|74152778|dbj|BAE42653.1| unnamed protein product [Mus musculus]
Length = 230
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 105 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 164
L + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + IS++ IF+F
Sbjct: 47 LVQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIF 106
Query: 165 LSNSGGTEIMNTFLEL----RKSECIEF 188
LSN+GG I T L+ RK E I+
Sbjct: 107 LSNAGGDLITKTALDFWRAGRKREEIQL 134
>gi|148676548|gb|EDL08495.1| torsin family 1, member B, isoform CRA_a [Mus musculus]
Length = 185
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 105 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 164
L + QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + IS++ IF+F
Sbjct: 2 LVQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIF 61
Query: 165 LSNSGGTEIMNTFLEL----RKSECIEF 188
LSN+GG I T L+ RK E I+
Sbjct: 62 LSNAGGDLITKTALDFWRAGRKREEIQL 89
>gi|38383107|gb|AAH62340.1| TOR2A protein [Homo sapiens]
Length = 247
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 97 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 156
F N R L +W+ N+TAC R++F+FDE+DK P GL++V+ PF+ V +
Sbjct: 55 FANATSGPTCRKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTN 114
Query: 157 FQNTIFLFLSNSGGTEIMNTFLELRKS 183
++ IF+F+SN+GG +I LE +S
Sbjct: 115 YRKAIFIFISNTGGEQINQVALEAWRS 141
>gi|431898900|gb|ELK07270.1| Torsin-1B [Pteropus alecto]
Length = 215
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+
Sbjct: 36 QLRRWIRGNVSACASSMFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNA 95
Query: 169 GGTEIMNTFLEL----RKSECIEF 188
GG I T LE RK E I+
Sbjct: 96 GGDLITKTALEFWRAGRKREDIQL 119
>gi|358414641|ref|XP_613495.5| PREDICTED: torsin-1B [Bos taurus]
Length = 204
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+
Sbjct: 25 QLQRWIRGNVSACAGSVFIFDEMDKLHPGVIDAIKPFLDYYEQIDGVSYRKAIFIFLSNA 84
Query: 169 GGTEIMNTFLEL----RKSECIEF 188
GG I T L+ RK E I+
Sbjct: 85 GGDLITKTALDFWRAGRKREDIQL 108
>gi|444517776|gb|ELV11790.1| Torsin-1B [Tupaia chinensis]
Length = 209
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
QL WI NV+AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+
Sbjct: 30 QLQKWIRGNVSACASSLFIFDEMDKLHPGVIDAIKPFLDYYEQVDGVSYRKAIFIFLSNA 89
Query: 169 GGTEIMNTFLEL----RKSECIEF 188
GG I L+ RK E I+
Sbjct: 90 GGDLITKVALDFWRAGRKREDIQL 113
>gi|449478098|ref|XP_002194186.2| PREDICTED: peptidyl-tRNA hydrolase-like [Taeniopygia guttata]
Length = 328
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNS 168
L WI N+T C R+ F+FDE+DK GL+DVIIPF+ V +++ IF+F+SN+
Sbjct: 194 SLKRWIQGNLTNCGRSAFLFDEMDKMHPGLIDVIIPFLGPSWVVYGTNYRKAIFIFISNA 253
Query: 169 GGTEIMNTFLELRKS 183
GG +I N L L ++
Sbjct: 254 GGEQINNVTLALWRA 268
>gi|426332886|ref|XP_004028023.1| PREDICTED: torsin-3A isoform 3 [Gorilla gorilla gorilla]
Length = 350
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC 121
TGKN+V +V ++ Y+D S V F + HFP+ +V LY+ QL + I C
Sbjct: 124 TGKNFVARMLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLC 180
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLEL 180
+ +FIFDE +K GLL+V+ P ++ A + TIFLFLSN G I L+L
Sbjct: 181 HQTLFIFDEAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKL 240
Query: 181 RKS 183
K+
Sbjct: 241 LKA 243
>gi|255671995|gb|ACU26617.1| CG3024 [Drosophila simulans]
Length = 163
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + V LE+ L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 53 ECCDDRSI-PARVHELEKSLERTLIGQHIVRQHIVPALKAHIASSDKSRKPLVISFHGQP 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 111
GTGKN+V D I +++ Y S +V K+ + FPNE+ V Y+ +++
Sbjct: 112 GTGKNFVADQIANAL---YLKGSKSNYVTKYLGQADFPNESQVDSYKAKIS 159
>gi|147906933|ref|NP_001090348.1| torsin-4A-A [Xenopus laevis]
gi|123914278|sp|Q0IHC5.1|TO4AA_XENLA RecName: Full=Torsin-4A-A; AltName: Full=Torsin family 4 member A-A
gi|114107859|gb|AAI23215.1| MGC154455 protein [Xenopus laevis]
Length = 420
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ+ AI + L+++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQKRAIEKLMDHLQDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++ + K ++ + FV ++ + + PNEN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSIMDNDFVLQYYTMHNCPNENDVTQCQSEMSGLISEMISRAEIE 264
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+FIFDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDEVEVMPVALLDVLHRYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>gi|327290692|ref|XP_003230056.1| PREDICTED: torsin family protein C9orf167 homolog A-like [Anolis
carolinensis]
Length = 406
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+ +++ V GQ+LA+ + G LK++ HN K L IS HG G GK++V ++++
Sbjct: 148 LEKTMRREVFGQDLAVEGVMGLLKDYLATHIHN-KPLVISFHGPSGVGKSHV-GWLLAKH 205
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEV 131
F+ G +H F H P +L+L+ + VT + +FI DEV
Sbjct: 206 FRSI--MGHETVLHYFTQH-HCPEGVPAMSCQLELSKMVTEMVTQAEVEEKIPLFILDEV 262
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ P LL+ + F H N+ F N +++ +SN G E+ + L+
Sbjct: 263 ESMPPDLLETLGRFF-HTNQTNE--FLNAVYILISNLGAKEVTDVLLQ 307
>gi|71896111|ref|NP_001025600.1| torsin-4A [Xenopus (Silurana) tropicalis]
gi|82178619|sp|Q5BKJ7.1|TOR4A_XENTR RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|60551288|gb|AAH91049.1| MGC108282 protein [Xenopus (Silurana) tropicalis]
Length = 420
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQRRAIDKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++ + K ++ + FV ++ + + P+EN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSVMDNDFVLQYYTMHNCPDENDVAKCQAEVSGMISEMISRAEIE 264
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+FIFDE++ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDELEVMPVALLDVLHGYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>gi|260787437|ref|XP_002588759.1| hypothetical protein BRAFLDRAFT_125633 [Branchiostoma floridae]
gi|229273929|gb|EEN44770.1| hypothetical protein BRAFLDRAFT_125633 [Branchiostoma floridae]
Length = 465
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
++ LEE+L Q + GQ +A + A+ H H + L +S G G GK ++
Sbjct: 134 SISALEEELNQRLFGQHIAKRVVIEAMSGHLAG-THGSTPLVMSFVGPSGVGKTFL---- 188
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDE 130
S + R+ + VH+F HFP+ LYR Q+ +W+ NV+ DR +F+FDE
Sbjct: 189 -SRLLSRFLSQSCGVKVHEFIIPHHFPHPEEAQLYREQVRDWVQGNVSHSDRQHLFVFDE 247
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
++K L + + ++ + + NT+++F+
Sbjct: 248 MEKVYPDLAEGLQSLLEDNTL-------NTMYIFI 275
>gi|18606215|gb|AAH23085.1| Tor2a protein, partial [Mus musculus]
Length = 176
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
N+TAC R++F+FDE+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I
Sbjct: 3 GNLTACGRSLFLFDEMDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQ 62
Query: 176 TFLELRKS 183
LE +S
Sbjct: 63 VALEAWRS 70
>gi|431899056|gb|ELK07426.1| hypothetical protein PAL_GLEAN10012742 [Pteropus alecto]
Length = 478
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 202 DDNAQRYDLDGLEKALQRAVFGQSAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 260
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P R +L + V +
Sbjct: 261 SHVGRLLARH-FRAVLEDGAP--VLQYDARHHCPEPRSAEDCREELARRVADVVAQAEAE 317
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P LLD + F+ ++ F N I++ LS +GG EI L+
Sbjct: 318 EMTPLLVLDDVELMPPALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEITRFVLQ 373
>gi|351705286|gb|EHB08205.1| hypothetical protein GW7_03927 [Heterocephalus glaber]
Length = 415
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I L+++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V +++++ H P R +L + + V +
Sbjct: 201 SHVGRLLSRHFRAVLED---SALVLQYHAQHHCPEPRAAQGCREELARRVATVVAQAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH F N I++ LSN+GG E+
Sbjct: 258 EKTPLVVLDEAELLPPALLDELHGLLQPQRAHH-------FHNAIYVLLSNAGGAEVTRF 310
Query: 177 FLE 179
L+
Sbjct: 311 VLQ 313
>gi|297685844|ref|XP_002820484.1| PREDICTED: torsin-4A [Pongo abelii]
Length = 422
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A++ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L ++ V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVVDVVARAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|114627745|ref|XP_528518.2| PREDICTED: torsin-4A [Pan troglodytes]
gi|410217130|gb|JAA05784.1| chromosome 9 open reading frame 167 [Pan troglodytes]
gi|410250028|gb|JAA12981.1| chromosome 9 open reading frame 167 [Pan troglodytes]
gi|410331129|gb|JAA34511.1| chromosome 9 open reading frame 167 [Pan troglodytes]
Length = 423
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVAQAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|7020208|dbj|BAA91032.1| unnamed protein product [Homo sapiens]
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|116063568|ref|NP_060193.2| torsin-4A [Homo sapiens]
gi|147638588|sp|Q9NXH8.2|TOR4A_HUMAN RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|426363738|ref|XP_004048991.1| PREDICTED: torsin-4A [Gorilla gorilla gorilla]
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVAQAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|210111682|gb|ACJ07155.1| torsin 1B [Sus scrofa]
Length = 155
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ Q N + +L++ + GQ LA + AL F+N + KAL +SLHG
Sbjct: 55 ECCREE--QPLNASAFKLELEERLFGQHLATEVLLKALTG-FRNNKNPKKALTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR 107
GTGKN+V+ + ++ ++ S FVH F S +HFP+E HV LY+
Sbjct: 112 GTGKNFVSQIVAENLHRKGLK---SNFVHLFVSTLHFPHEQHVKLYQ 155
>gi|15341833|gb|AAH13092.1| A830007P12Rik protein [Mus musculus]
Length = 380
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 177 FLE 179
L+
Sbjct: 306 VLQ 308
>gi|31981884|ref|NP_666227.2| torsin-4A [Mus musculus]
gi|81896065|sp|Q8BH02.1|TOR4A_MOUSE RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|26335761|dbj|BAC31581.1| unnamed protein product [Mus musculus]
gi|26350075|dbj|BAC38677.1| unnamed protein product [Mus musculus]
gi|74143001|dbj|BAE42522.1| unnamed protein product [Mus musculus]
gi|74181873|dbj|BAE32638.1| unnamed protein product [Mus musculus]
gi|74207076|dbj|BAE33317.1| unnamed protein product [Mus musculus]
gi|148676260|gb|EDL08207.1| RIKEN cDNA A830007P12 [Mus musculus]
Length = 426
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 177 FLE 179
L+
Sbjct: 306 VLQ 308
>gi|395844196|ref|XP_003794848.1| PREDICTED: torsin-4A [Otolemur garnettii]
Length = 422
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ + ++++ H ++ L ++LHG G GK
Sbjct: 141 DDNAQRYDLDGLEKVLQRTVFGQPAAVGRVVALMRDYLATHVH-SRPLLLALHGPSGVGK 199
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P + R +L + V +
Sbjct: 200 SHVGRLLARHFRAVLED---SALVLQYHTRHHCPEQRATQDCREELARRVADVVARAEAE 256
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DEV+ P LLD + F+ ++ F N I++ LS +GG EI L+
Sbjct: 257 EKTPLLVLDEVELMPPALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEITRFVLQ 312
>gi|344308168|ref|XP_003422750.1| PREDICTED: torsin family protein C9orf167-like [Loxodonta africana]
Length = 419
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 139 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 197
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ D G V ++++R H P + V R +L + V +
Sbjct: 198 SHVGRLLARH-FRAVLDDGA--LVLQYHARHHCPEPSAVKACREELARRVADVVARAEAE 254
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DEV+ LLD + F+ + F + I++ LS++GG EI L+
Sbjct: 255 EKTPLLVLDEVEAMRPALLDEVHGFLQPQRSHQ---FHSAIYVLLSSTGGGEITRFVLQ 310
>gi|148231516|ref|NP_001089731.1| torsin-4A-B [Xenopus laevis]
gi|123900453|sp|Q3KQ18.1|TO4AB_XENLA RecName: Full=Torsin-4A-B; AltName: Full=Torsin family 4 member A-B
gi|76779557|gb|AAI06424.1| MGC131104 protein [Xenopus laevis]
Length = 418
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 148 DDNLQKYDLDGLEKTLQREVFGQTRAIEKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 206
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++ + K ++ + FV ++ + + PNE+ V + +++ I ++ +
Sbjct: 207 SHTGRLLA----KHFRSVVDNDFVLQYYTNHNCPNESDVIQCQAEVSAMISQMISRAEIE 262
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+F+FDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 263 EKIPVFLFDEVEAMPVALLDVLHSYFQ----LNQSNEYLNVVYILISNIGGHEITKFVLQ 318
>gi|157821971|ref|NP_001101286.1| torsin family 4, member A [Rattus norvegicus]
gi|149039416|gb|EDL93636.1| rCG45397 [Rattus norvegicus]
Length = 434
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVSRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARHHCPELRPVQDCRKELAQRVADVVAQAEAE 252
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 177 FLE 179
L+
Sbjct: 306 VLQ 308
>gi|390358220|ref|XP_796829.2| PREDICTED: torsin-1A-like [Strongylocentrotus purpuratus]
Length = 222
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 97 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 156
FP++ H+ Y+ +L + I S V++C +FIFDEV+ P GLLD I F+DHH
Sbjct: 15 FPHKAHLEKYKEELVSLIKSKVSSCPHHVFIFDEVENMPAGLLDNIKGFLDHHTKVEGTD 74
Query: 157 FQNTIFLFLSNSGGTEI 173
++ IF+F SN I
Sbjct: 75 YRKAIFIFRSNLAAQAI 91
>gi|260811159|ref|XP_002600290.1| hypothetical protein BRAFLDRAFT_66793 [Branchiostoma floridae]
gi|229285576|gb|EEN56302.1| hypothetical protein BRAFLDRAFT_66793 [Branchiostoma floridae]
Length = 568
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 15 VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LEE+L Q + GQ +A + A+ H + H + L +S +G G GK ++ S
Sbjct: 233 ALEEELNQRLIGQHIAKRVVLEAMSGHLAGK-HGSTPLVMSFYGPSGVGKTFL-----SR 286
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDEVDK 133
+ R+ + H+F HFP+ YR Q+ +W+ NV+ DR +F+FDE++
Sbjct: 287 LLSRFLSQSCGVRAHEFIIPHHFPHPGEAWQYREQVRDWVRGNVSHSDRQHLFVFDEMET 346
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
L + ++ ++ NT+F+F+
Sbjct: 347 VYPSLAEGLLSLLEEDTT-------NTMFIFI 371
>gi|57092145|ref|XP_548350.1| PREDICTED: torsin family protein C9orf167 [Canis lupus familiaris]
Length = 424
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A++ I L+++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPEAVARIVALLRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++V + F+ + G V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARH-FRSVLEDGA--LVLQYHARHHCPEARAAQACREELAALVADVVARAEVE 257
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DE + P LLD + F+ + F N I++ LS GG EI L+
Sbjct: 258 EKTPLVVLDEAELMPPALLDELHGFLQPQRAH---PFHNAIYVLLSGVGGAEITRFVLQ 313
>gi|211828947|gb|AAH80527.2| TOR2A protein [Homo sapiens]
Length = 155
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 97 FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS 156
F N R L +W+ N+TAC R++F+FDE+DK P GL++V+ PF+ V +
Sbjct: 42 FANATSGPTCRKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTN 101
Query: 157 FQNTIFLFL 165
++ IF+F+
Sbjct: 102 YRKAIFIFI 110
>gi|296191261|ref|XP_002743543.1| PREDICTED: torsin-4A [Callithrix jacchus]
Length = 423
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P R +L + + V +
Sbjct: 201 SHVGRLLARH-FRAVLEDGA--LVLQYHARHHCPEARAARDCREELARRVANVVERAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRPHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|444521173|gb|ELV13114.1| hypothetical protein TREES_T100011187 [Tupaia chinensis]
Length = 427
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L + V GQ A++ I L+++ HN + L ++LHG G GK
Sbjct: 146 DDNAQRYDLDGLEKALGRAVFGQPAAVARIVALLRDYLATHVHN-RPLLLALHGPSGVGK 204
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ G V +++ R H P R +L + V +
Sbjct: 205 SHVGRLLARH-FRAVLSGGVP--VLQYHVRHHCPQPRPAQECREELARRVADVVARAEAE 261
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DEV+ P LLD + F+ ++ F N I++ LS++GG E+ L+
Sbjct: 262 EKTPLVVLDEVELMPLALLDELQGFLQPQRSHH---FHNAIYVLLSSNGGAEVTRFVLQ 317
>gi|397492351|ref|XP_003817087.1| PREDICTED: torsin-4A, partial [Pan paniscus]
Length = 370
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 89 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 147
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + +
Sbjct: 148 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADXXAQAEAE 204
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 205 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 260
>gi|354503370|ref|XP_003513754.1| PREDICTED: torsin family protein C9orf167 homolog [Cricetulus
griseus]
gi|344251303|gb|EGW07407.1| Torsin family protein C9orf167-like [Cricetulus griseus]
Length = 427
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALRRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D V ++++R H P + V R +L + V +
Sbjct: 196 SHVGRLLARHFHDVLEDGA---LVLQYHARHHCPEQRPVQECRKELAQRVADVVAQAEAE 252
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH N I++ LS GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHGLLQPQRSHH-------LHNAIYVLLSGVGGLEITHF 305
Query: 177 FLE 179
L+
Sbjct: 306 VLQ 308
>gi|312370738|gb|EFR19069.1| hypothetical protein AND_23112 [Anopheles darlingi]
Length = 507
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 115 ISNVTA-CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
I TA C ++FIFDEV+K P GL D I+ +D+HA + +F+ +IF+FLSN G EI
Sbjct: 319 IKRATAKCPTSLFIFDEVEKMPAGLFDTIVSLLDNHAYTKEHNFRQSIFVFLSNVAGPEI 378
Query: 174 MN 175
N
Sbjct: 379 AN 380
>gi|313243743|emb|CBY42363.1| unnamed protein product [Oikopleura dioica]
Length = 153
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHN-TKALAISLHGL 59
E C ++I+ + L E+L+++++GQ A + A+ N + + K L + LHG
Sbjct: 42 ECCNSRWIKRNETE-LRERLRENIYGQPFATRILLNAVGNRWSDPNQEYDKPLVMMLHGP 100
Query: 60 PGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWI 114
G GKNY+T + +S+F +GT S F+H S +HF +++++ + QL +WI
Sbjct: 101 TGVGKNYITRTLANSMFT----EGTNSVFIHYLTSAVHFTSDDNIKTHISQLQSWI 152
>gi|194226094|ref|XP_001491173.2| PREDICTED: torsin family protein C9orf167-like [Equus caballus]
Length = 550
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK
Sbjct: 264 DDNAQRYDLDGLEKALQRAVFGQPAAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGK 322
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V +++++ H P R +L + V +
Sbjct: 323 SHVGRLLARH-FRAVLEDGA--LVLQYHAQHHCPEPRAAQDCREELAQRVADVVARAEAE 379
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DEV+ P LLD + F+ + F N I++ LS +GG I L+
Sbjct: 380 EKTPLLVLDEVELMPAALLDELHGFLQPQRSH---PFHNAIYVLLSRTGGPHITRFVLQ 435
>gi|15680258|gb|AAH14484.1| TOR1A protein [Homo sapiens]
Length = 197
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 113
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 154
>gi|334312269|ref|XP_001374726.2| PREDICTED: torsin family protein C9orf167 homolog [Monodelphis
domestica]
Length = 395
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ+ A I L+++ H ++ L ISL+G G GK
Sbjct: 127 DDNLQKYDLDGLEKALQRGVFGQKAATDSIMELLRDYLATHIH-SQPLVISLNGPSGVGK 185
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + K ++ FV ++ H P+ R L+ I VT +
Sbjct: 186 SHVGRLLA----KHFRSVMEGDFVFQYYVMHHCPDCQEGFTCRQDLSERITDMVTRAEVE 241
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
+FI DEV+ GLLD + F+ F N I++ +S+ GG+EI L+
Sbjct: 242 EKIPVFILDEVEFMSPGLLDTLHGFLQPR---QSNEFLNAIYVLISSIGGSEITRFVLQN 298
Query: 181 RKSE 184
SE
Sbjct: 299 VSSE 302
>gi|397503810|ref|XP_003822511.1| PREDICTED: torsin-1A [Pan paniscus]
Length = 318
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 113
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 186
>gi|426363286|ref|XP_004048774.1| PREDICTED: torsin-1B isoform 1 [Gorilla gorilla gorilla]
Length = 159
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLT 111
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ L+
Sbjct: 112 GTGKNFVSQIVAENL----HPKGLKSNFVHLFVSTLHFPHEQKIKLYQSSLS 159
>gi|119608314|gb|EAW87908.1| torsin family 1, member A (torsin A), isoform CRA_b [Homo sapiens]
Length = 229
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 80 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 136
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW 113
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ ++ W
Sbjct: 137 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKARMEVW 186
>gi|307205303|gb|EFN83661.1| Torsin-like protein [Harpegnathos saltator]
Length = 102
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGLPGTGKNYVTDFIVSS 74
L+ L +V+GQ++A I AL+ HF HN+ KAL +S HG PGTGKNYV I +
Sbjct: 10 LDYMLTANVYGQQIAHEAIINALRGHFYT--HNSPKALVMSFHGTPGTGKNYVAQMIAMA 67
Query: 75 IFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQL 110
++K KG S++ + FN R FP + + Y++ L
Sbjct: 68 LYK----KGIQSQYYYFFNGRNDFPLQRKLDDYKVCL 100
>gi|224073045|ref|XP_002191722.1| PREDICTED: torsin-4A-A-like [Taeniopygia guttata]
Length = 549
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ + + V GQ++A+ I LK++ HN K L ISL+G G GK
Sbjct: 280 DDNLQKYDLDGLEKTMHREVFGQKVAVESIVELLKDYLATHIHN-KPLVISLNGPTGVGK 338
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++V ++++ F+ D + FV ++ H P+ + L+ I VT +
Sbjct: 339 SHVG-WVLAKHFRSVMD---NDFVLQYFVMHHCPSGVDPLTCEIDLSKKISDMVTRAEIE 394
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEI 173
+FI DEV+ LLD + F + NQ + F N I++ +SN GG EI
Sbjct: 395 EKTPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNLGGAEI 444
>gi|291230660|ref|XP_002735284.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 666
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 22 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKD 81
+ V GQ+L + A+ + N TK L +S HG GTGK VT ++ +F ++
Sbjct: 398 KSVFGQDLVNQILPSAILKYMYNDV--TKPLVLSFHGWTGTGKTLVTSVLIEELFIKH-- 453
Query: 82 KGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDV 141
R H+F S + F +E++ +Y + N+I S V C + +FDE+D PK ++
Sbjct: 454 -NLDRCAHRFISSLDFASEDNYKVYNTAIMNFINSTV-KCKVRLLVFDEIDIIPKQMIPR 511
Query: 142 IIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+ ++ +QI +I + SN G EI N F+
Sbjct: 512 LHALFSDNSHLSQIG--KSICILESNLFGHEI-NRFM 545
>gi|449270257|gb|EMC80952.1| Torsin family protein C9orf167 like protein, partial [Columba
livia]
Length = 424
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ + + V GQ+LA+ + LK++ HN K L ISL+G G GK
Sbjct: 155 DDNLQKYDLDGLEKTMHREVFGQKLAVESMMELLKDYLATHIHN-KPLVISLNGPTGVGK 213
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V ++++ F+ D + FV ++ H P+ + L+ I VT +
Sbjct: 214 SHV-GWLLAKHFRSVMD---NDFVLQYFVMHHCPDGVAPLTCEIDLSEKISDMVTRAEVE 269
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEI 173
+FI DEV+ LLD + F + NQ + F N I++ +SN GG EI
Sbjct: 270 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEI 319
>gi|345320142|ref|XP_001521478.2| PREDICTED: torsin-3A-like, partial [Ornithorhynchus anatinus]
Length = 147
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+N+ LE L +HGQ LA + A+++ F H KALA+S HG GTGKN+V
Sbjct: 34 NNITGLESDLSIRLHGQHLARHVVLKAVRD-FLALPHPEKALALSFHGWSGTGKNFVARM 92
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQ 109
+ ++ Y+D S V F S HFP+ +V LY+++
Sbjct: 93 MADNL---YRDGLGSECVKVFISLFHFPHPRYVDLYQVR 128
>gi|170054429|ref|XP_001863125.1| torsin a [Culex quinquefasciatus]
gi|167874731|gb|EDS38114.1| torsin a [Culex quinquefasciatus]
Length = 237
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 105 LYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLF 164
++ L I + C ++FIFDE++K G+ D I+ +DHH+ F IF+F
Sbjct: 1 MFPFSLAAGIKKAIKDCPYSLFIFDEIEKLKPGVFDAIVNLLDHHSSLKGYDFSKAIFIF 60
Query: 165 LSNSGGTEI 173
LSNS GTEI
Sbjct: 61 LSNSAGTEI 69
>gi|326930208|ref|XP_003211243.1| PREDICTED: torsin family protein C9orf167 homolog A-like [Meleagris
gallopavo]
Length = 326
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ + + V GQ+LA+ I LK++ HN K L +SL+G G GK
Sbjct: 57 DDNLQKYDLDGLEKTMHREVFGQKLAVESIMQLLKDYLATHIHN-KPLVLSLNGPTGVGK 115
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++V ++++ F+ D + FV ++ H P+ L+ I VT +
Sbjct: 116 SHV-GWLLAKHFRSVMD---NDFVLQYFVMHHCPSGVDPLTCETDLSKKISDMVTRAEIE 171
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+FI DEV+ LLD + F + NQ + F N I++ +SN GG EI ++
Sbjct: 172 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEITKFIIQ 227
Query: 180 LRKSECIE 187
+E ++
Sbjct: 228 NASAELLQ 235
>gi|292617967|ref|XP_002663514.1| PREDICTED: torsin family protein C9orf167 homolog [Danio rerio]
Length = 425
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ LK+ V GQ+ + G L+++ HN K L +S HG G GK
Sbjct: 156 DDHVLKYDLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPLVLSFHGPTGVGK 214
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + + ++ V ++ H P ++ + + L + I V+ +
Sbjct: 215 SHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLESHISEMVSQGEEE 270
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+FIFDEV+ P+ L+D + I N + N I++ +SN G +I
Sbjct: 271 EKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNLGHEDI 320
>gi|62955091|ref|NP_001017561.1| torsin-4A [Danio rerio]
gi|82178190|sp|Q568B8.1|TOR4A_DANRE RecName: Full=Torsin-4A; AltName: Full=Torsin family 4 member A
gi|62204430|gb|AAH92931.1| Zgc:110567 [Danio rerio]
Length = 409
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ LK+ V GQ+ + G L+++ HN K L +S HG G GK
Sbjct: 140 DDHVLKYDLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPLVLSFHGPTGVGK 198
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + + ++ V ++ H P ++ + + L + I V+ +
Sbjct: 199 SHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLESHISEMVSQGEEE 254
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+FIFDEV+ P+ L+D + I N + N I++ +SN G +I
Sbjct: 255 EKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNLGHEDI 304
>gi|363740304|ref|XP_415532.3| PREDICTED: torsin family protein C9orf167 homolog A [Gallus gallus]
Length = 531
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ + + V GQ+LA+ I LK++ HN K L +SL+G G GK
Sbjct: 262 DDNLQKYDLDGLEKTMHREVFGQKLAVESIMQLLKDYLATHIHN-KPLVLSLNGPTGVGK 320
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++V ++++ F+ D + FV ++ H P+ L+ I VT +
Sbjct: 321 SHV-GWLLAKHFRSVMD---NDFVLQYFVMHHCPSGAAPLTCETDLSKKISDMVTRAEIE 376
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTE-----IM 174
+FI DEV+ LLD + F + NQ + F N I++ +SN GG E I
Sbjct: 377 EKIPLFILDEVELMSPVLLDTLSRFFEP----NQTNEFLNAIYILISNIGGGEITKFVIQ 432
Query: 175 NTFLEL--RKSECIEFIFQCQPL 195
N EL ++S E + QP+
Sbjct: 433 NASAELLQQRSGAEELLSVIQPV 455
>gi|76631110|ref|XP_875868.1| PREDICTED: torsin family protein C9orf167 [Bos taurus]
gi|297480894|ref|XP_002691726.1| PREDICTED: torsin family protein C9orf167 [Bos taurus]
gi|296482005|tpg|DAA24120.1| TPA: hypothetical protein BOS_12245 [Bos taurus]
Length = 406
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+ L++ V GQ A+ + L+++ H ++ L ++LHG G GK++V +
Sbjct: 142 LEKTLQRAVFGQPAAVGRLVALLRDYLATHVH-SRPLLLALHGPSGVGKSHVGRLLARH- 199
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-----IFIFDE 130
F+ + G V ++++R H P + R +L + ++V A A + + D+
Sbjct: 200 FRAVLEDGA--LVLQYHTRHHCPAPRAATGCREELARRV-ADVLARAEAEEKTPLLVLDD 256
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ P LLD + + F N +++ LS +GG E+ L+
Sbjct: 257 AELLPPALLDELHGLLQPQ---RPPRFHNAVYVLLSGAGGAEVTRFVLQ 302
>gi|348574448|ref|XP_003473002.1| PREDICTED: torsin family protein C9orf167-like [Cavia porcellus]
Length = 413
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I L+++ H ++ L ++LHG G GK
Sbjct: 140 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIMALLRDYLATHVH-SRPLLLALHGPSGVGK 198
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQL----TNWIISNVTA 120
++V + +D V +++++ H P + R +L +
Sbjct: 199 SHVGRLLARHFHAVLEDGA---LVLQYHAQHHCPEPHAAQGCREELARRVAAVVAQAEAE 255
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + DE + P LLD + + + F N I++ LS GG E+ L+
Sbjct: 256 EKTPLVVLDEAELLPPALLDELHGLLQPQRAHQ---FHNAIYVLLSGMGGAEVTRFVLQ 311
>gi|395506591|ref|XP_003757615.1| PREDICTED: torsin-4A [Sarcophilus harrisii]
Length = 422
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ+ A I L+++ H ++ L IS +G G GK
Sbjct: 154 DDNLQKYDLDGLEKALQRGVFGQKAATDSIMELLRDYLATHIH-SQPLVISFNGPSGVGK 212
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + K ++ FV ++ H P+ + L I VT +
Sbjct: 213 SHVGRLLA----KHFRSVMDGDFVLQYYVMHHCPDPQEGPACQQDLAERITDMVTRAEVE 268
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+FI DEV+ LLD + F+ F N I++ +S+ GG+E+ L+
Sbjct: 269 EKIPVFILDEVEFMSPALLDTLHGFLQPQ---QSNEFLNAIYVLISSIGGSEVTRLVLQ 324
>gi|149038989|gb|EDL93209.1| rCG45678, isoform CRA_a [Rattus norvegicus]
Length = 310
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL 108
F + S VH F+ IHFP+ +H Y++
Sbjct: 111 F---RGGLRSPHVHHFSPIIHFPHPSHTEQYKV 140
>gi|326667655|ref|XP_003198645.1| PREDICTED: torsin family protein C9orf167 homolog [Danio rerio]
Length = 373
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE L + V GQ+ A+ + L N + + Y + + LA+SLHG G GK
Sbjct: 111 DDHVVKYDLEGLERSLHREVFGQQEALEELMDHL-NDYLSTYAHQQPLALSLHGPSGVGK 169
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+++ + DK ++ K + + ++ S ++T +
Sbjct: 170 SHLGRLLARHFRSIVDDKLVVHYISKHHCPLQEEAQHCASTIARRITEVVTQAEEEEQIP 229
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
FI DEV+ LLD + F+ F N +++FLS+ G +EI L+
Sbjct: 230 FFILDEVEAMAPPLLDTLQTFLQSDQTNE---FLNVVYVFLSSLGQSEITAYVLQ 281
>gi|345309623|ref|XP_001521765.2| PREDICTED: torsin family protein C9orf167 homolog A-like, partial
[Ornithorhynchus anatinus]
Length = 386
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q +V LE+ L++ V GQ A+ + L+++ H +K L +SL+G G GK
Sbjct: 118 DDNLQKYDVDGLEKTLRRGVFGQAAAVDGLVELLRDYLATHVH-SKPLVLSLNGPSGVGK 176
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI---ISNVTAC 121
++V + + ++ FV + P + R +L I ++ A
Sbjct: 177 SHVGRLLA----RHFRSVMDPDFVTHYYVLHRCPEREALPACRRELAARIADVVARAEAE 232
Query: 122 DR-AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+R +FI DEV+ LLD + ++ + N+ F N +++ +S+ GG+EI L+
Sbjct: 233 ERVPLFILDEVEFMAPDLLDTLHAYL-QPGLSNE--FLNAVYVLISSIGGSEITRFVLQ 288
>gi|355567293|gb|EHH23634.1| hypothetical protein EGK_07139, partial [Macaca mulatta]
Length = 387
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ AI+ I ++++ H ++ L ++LHG G GK
Sbjct: 106 DDNAQRYDLDGLEKALQRAVFGQPAAIARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 164
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 165 SHVGRLLARHFRSVLED---SSLVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 221
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 222 EKTPLLVLDDVELLPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 277
>gi|410903964|ref|XP_003965463.1| PREDICTED: torsin-4A-like [Takifugu rubripes]
Length = 444
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ L + V GQ+ A+ + L+++ Y ++K L +SLHG G GK
Sbjct: 168 DDHVLKYDLEGLEKTLMREVFGQQEAVDGLLSHLRDYLST-YAHSKPLVVSLHGPSGVGK 226
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
+++ + + ++ V ++ H P E HV L+ I V +
Sbjct: 227 SHLGRLLA----RHFRSVTGEAMVLQYYVLHHCPQEAHVPRCAHNLSAVISEMVRQAEEE 282
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+ +FDE++ +LD++ + A + +QN I+L LSN G ++ L
Sbjct: 283 EKIPLLVFDEMEHMHGEILDMLWEAV---ASRDSNEYQNAIYLLLSNLGQEHVIKYML 337
>gi|157954512|ref|NP_001103331.1| uncharacterized protein LOC100126135 [Danio rerio]
gi|156230268|gb|AAI51942.1| Si:ch211-241p16.1 protein [Danio rerio]
Length = 373
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE L + V GQ+ A+ + L N + + Y + + LA+SLHG G GK
Sbjct: 111 DDHVVKYDLEGLERSLHREVFGQQEALEELMDHL-NDYLSTYAHQQPLALSLHGPSGVGK 169
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+++ + DK ++ K + + ++ S ++T +
Sbjct: 170 SHLGRLLARHFRSIVDDKLVVHYISKHHCPLQEEAQHCASTIARRITEVVTQAEEEEQIP 229
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
FI DEV+ LLD + F+ F N +++FLS+ G +EI L+
Sbjct: 230 FFILDEVEAMAPPLLDTLQTFLQSDQTNE---FLNVVYVFLSSLGQSEITAHVLQ 281
>gi|302563875|ref|NP_001180736.1| torsin family protein C9orf167 [Macaca mulatta]
Length = 423
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ AI+ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAIARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SSLVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELLPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>gi|311246904|ref|XP_003122389.1| PREDICTED: torsin family protein C9orf167-like [Sus scrofa]
Length = 415
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+ L++ V GQ A+ I L+++ H ++ L ++LHG G GK++V +
Sbjct: 143 LEKALQRAVFGQPSAVGRIVALLRDYLATHVH-SRPLLLALHGPSGVGKSHVGRLLARHF 201
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEV 131
+D S V ++++R H P+ R +L + V + + + DEV
Sbjct: 202 RAVLED---SALVLQYDARHHCPDPRAAQDCREELAQRVADVVARAEAEEKTPLLVLDEV 258
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 259 ELLPQALLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 303
>gi|47228499|emb|CAG05319.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ L + V GQ A+ + ++++ Y + K L +SLHG G GK
Sbjct: 158 DDHVIKYDLEGLEKTLLREVVGQREAVDGLLSHMRDYLST-YAHRKPLLVSLHGPTGVGK 216
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
+Y+ + + ++ V ++ H P + L+ I VT +
Sbjct: 217 SYLGRLLA----RHFRSVAGEAMVLQYYVLHHCPQKADAPHCAHNLSTVITEMVTQAEEE 272
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+FIFDEV+ +LD + + A + +QN I+L LSN G I+ L
Sbjct: 273 EKIPLFIFDEVEHMHGEILDALWGAV---ASRDSNEYQNAIYLLLSNLGHEHIVKFML 327
>gi|156408431|ref|XP_001641860.1| predicted protein [Nematostella vectensis]
gi|156229000|gb|EDO49797.1| predicted protein [Nematostella vectensis]
Length = 454
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 77/179 (43%), Gaps = 16/179 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 74
LE++LK+H+ GQE I + GA++ +N +H+ L G G GK + +
Sbjct: 99 LEQRLKEHIVGQEGPILVVSGAIRRK-ENGWHDEDHPLVFLFLGSSGIGKTELAKQVAHY 157
Query: 75 IFKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
I K K D + H+ I P QLT + C A+ +F
Sbjct: 158 IHKDNKKGFIRLDMSEYQEKHEVAKMIGAPPGYIGYDQGGQLTK----KLKECPNAVVLF 213
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DEVDK +L V++ D + + I ++ IF+ SN EI N LELRK
Sbjct: 214 DEVDKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIANHALELRKE 272
>gi|301121360|ref|XP_002908407.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103438|gb|EEY61490.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 366
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 3 CTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKA-LAISLHGLP 60
CT F+ + VL+ L+ ++ GQE A+ + GA++ F +A L +++ G
Sbjct: 10 CT--FVDKPSQTVLQ-HLQDNLKGQERAVEAVVGAIEAWEFSRSSTKDRAPLVLAITGPT 66
Query: 61 GTGKNYVTDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQLTNWI 114
GTGK +++ + ++FKR K +K + F N N ++ Y Q+ +
Sbjct: 67 GTGKTEMSNLVAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRL 126
Query: 115 ISNVTACD-RAIFIFDEVDKFPKGLLDVIIPFIDH--------HAVYNQISFQNTIFLFL 165
++ C +AI + DEV K LDV++ + H V I N IF+ +
Sbjct: 127 AEHLHHCSGKAIVVIDEVQKVIPHTLDVLMEAVSESSQFSYYKHGVTKNIDTANVIFVLV 186
Query: 166 SNSGGTEIMNTFLE 179
S+ G E+ ++
Sbjct: 187 SDIGVGEMEQVMIQ 200
>gi|350588232|ref|XP_003129658.3| PREDICTED: caseinolytic peptidase B protein homolog [Sus scrofa]
Length = 504
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 136 LEQRLKEHIIGQESAIAAVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 188
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T+R++HK + F + V+ + ++ +
Sbjct: 189 ------KQTARYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 242
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 243 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 302
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 303 ALQLRQ-EALEM 313
>gi|355679756|gb|AER96406.1| ClpB caseinolytic peptidase B-like protein [Mustela putorius furo]
Length = 326
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 68 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 127
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 128 HK------TAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 181
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 182 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 241
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 242 ALQLRQ-EALEM 252
>gi|196012549|ref|XP_002116137.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
gi|190581460|gb|EDV21537.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
Length = 613
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNT-KALAISLHGLPGTGKNYVTDFIVSS 74
LE+++K+ + GQEL I+ + A++ +N +HN + + G G GK + +
Sbjct: 272 LEKRIKEQIIGQELPIAAVASAIRRK-ENGWHNEDRPMVFLFLGSSGIGKTELAKQVAKY 330
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
I K ++ ++ + I QLT + C A+ + DEVDK
Sbjct: 331 IHKDLEN--VAKMIGSPPGYIGHDEGG-------QLTK----RLKKCSNAVVLLDEVDKA 377
Query: 135 PKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
+L +++ D + + I ++ IF+ N G EI N +ELRK
Sbjct: 378 HPDVLTILLQLFDEGRLTDGKGKTIDCKDAIFIMTCNLGNAEIANYAMELRK 429
>gi|119608785|gb|EAW88379.1| hCG1806355 [Homo sapiens]
Length = 249
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 38 LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHF 97
++++ H ++ L ++LHG G GK++V + +D S V ++++R H
Sbjct: 1 MRDYLATHVH-SRPLLLALHGPSGVGKSHVGRLLARHFRSVLED---SALVLQYHARHHC 56
Query: 98 PNENHVSLYRLQLTNWIISNVTACDR----AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN 153
P R +L + V + + + D+V+ P+ LLD + F+ ++
Sbjct: 57 PEARAAQDCREELARRVADVVARAEAEEKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH 116
Query: 154 QISFQNTIFLFLSNSGGTEIMNTFLE 179
F N I++ LS +GG E+ L+
Sbjct: 117 ---FHNAIYVLLSGAGGAEVTRFVLQ 139
>gi|332211401|ref|XP_003254808.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Nomascus leucogenys]
Length = 561
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 193 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 252
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 253 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 307
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 308 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 366
Query: 185 CIEF 188
+E
Sbjct: 367 ALEM 370
>gi|343958262|dbj|BAK62986.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
Length = 410
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 42 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 101
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 102 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 156
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 157 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 215
Query: 185 CIEF 188
+E
Sbjct: 216 ALEM 219
>gi|426245083|ref|XP_004016344.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Ovis
aries]
Length = 580
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 212 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 271
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 272 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 326
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 327 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 385
Query: 185 CIEF 188
+E
Sbjct: 386 ALEM 389
>gi|410045554|ref|XP_003952018.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
Length = 536
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 168 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 227
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 228 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 282
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 283 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 341
Query: 185 CIEF 188
+E
Sbjct: 342 ALEM 345
>gi|148684573|gb|EDL16520.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_d [Mus
musculus]
Length = 563
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 195 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 254
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 255 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 309
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 310 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 368
Query: 185 CIEF 188
+E
Sbjct: 369 ALEM 372
>gi|380798225|gb|AFE70988.1| caseinolytic peptidase B protein homolog, partial [Macaca mulatta]
Length = 461
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 93 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 152
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 153 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 207
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 208 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 266
Query: 185 CIEF 188
+E
Sbjct: 267 ALEM 270
>gi|194378722|dbj|BAG63526.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 197
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 198 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 252
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 253 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 311
Query: 185 CIEF 188
+E
Sbjct: 312 ALEM 315
>gi|296217139|ref|XP_002754880.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Callithrix jacchus]
Length = 562
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 194 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 253
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 254 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLRQCPNAVVLF 308
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 309 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 367
Query: 185 CIEF 188
+E
Sbjct: 368 ALEM 371
>gi|148684570|gb|EDL16517.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a [Mus
musculus]
Length = 506
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 305 ALQLRQ-EALEM 315
>gi|332211399|ref|XP_003254807.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Nomascus leucogenys]
Length = 506
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 197
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 198 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 252
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 253 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 311
Query: 185 CIEF 188
+E
Sbjct: 312 ALEM 315
>gi|149068723|gb|EDM18275.1| rCG39494, isoform CRA_b [Rattus norvegicus]
gi|149068724|gb|EDM18276.1| rCG39494, isoform CRA_b [Rattus norvegicus]
Length = 506
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 305 ALQLRQ-EALEM 315
>gi|74188805|dbj|BAE28128.1| unnamed protein product [Mus musculus]
Length = 598
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 230 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 289
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 290 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 344
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 345 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 403
Query: 185 CIEF 188
+E
Sbjct: 404 ALEM 407
>gi|345788351|ref|XP_003433059.1| PREDICTED: caseinolytic peptidase B protein homolog [Canis lupus
familiaris]
Length = 506
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 138 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 190
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 191 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 244
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 245 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 304
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 305 ALQLRQ-EALEM 315
>gi|431898077|gb|ELK06780.1| Caseinolytic peptidase B protein like protein [Pteropus alecto]
Length = 425
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 57 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 116
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 117 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLT----KKLKQCPNAVVLF 171
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 172 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 230
Query: 185 CIEF 188
+E
Sbjct: 231 ALEM 234
>gi|432106670|gb|ELK32323.1| Caseinolytic peptidase B protein like protein [Myotis davidii]
Length = 596
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 228 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 287
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 288 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTK----KLKQCPNAVVLF 342
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 343 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 401
Query: 185 CIEF 188
+E
Sbjct: 402 ALEM 405
>gi|170284743|gb|AAI61411.1| LOC100145643 protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 311 LERRLKEHIVGQESAIATVAAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 363
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T+R++HK + F ++ V+ + ++ +
Sbjct: 364 ------KQTARYMHKDIKKGFIRLDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 417
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ N+G EI
Sbjct: 418 CPDAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTCNAGSDEIAQY 477
Query: 177 FLELRK 182
L+LR+
Sbjct: 478 GLQLRQ 483
>gi|196009622|ref|XP_002114676.1| hypothetical protein TRIADDRAFT_58752 [Trichoplax adhaerens]
gi|190582738|gb|EDV22810.1| hypothetical protein TRIADDRAFT_58752 [Trichoplax adhaerens]
Length = 316
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNH--FQNRYHNTKALAISLHG 58
E CTD+ + E L++ + GQELA+ + K + QN + N K HG
Sbjct: 26 ECCTDRARYHYLTNTMIESLRRDIFGQELAVQTMGNIFKRYQMSQNSFKNNKIFL--FHG 83
Query: 59 LPGTGKNYVTDFIVSSIFKRYKDKGT-SRFVHKFN-SRIHFPNENHVSLYRLQLTNWIIS 116
GTGK+Y + +F G SR V F+ I N + LTN I+
Sbjct: 84 DIGTGKSYAASLLAHHLFPL----GIHSRLVMNFDLVNILDDKNNDIFQANQWLTNQILK 139
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHH-AVYNQISFQNTIFLFLSNSGGTEIMN 175
C + I + D+ +VI + + NQ+ F+ F+F+S G EI N
Sbjct: 140 LSRLCYAGVIILERWDEVNLCQFNVIDSIVGNRIGDPNQMKFRRMTFIFISTMGSAEINN 199
Query: 176 TFLELRKSECIEFIFQ 191
+ + + FQ
Sbjct: 200 ATIAAYSNNLLRGDFQ 215
>gi|432892483|ref|XP_004075803.1| PREDICTED: caseinolytic peptidase B protein homolog [Oryzias
latipes]
Length = 675
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 324 LERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 383
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDR 123
K K KG R H+ I P +E L +L + AC
Sbjct: 384 HKDIK-KGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKL---------LRACPN 433
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLE 179
A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI L+
Sbjct: 434 AVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASEEIAQHALQ 493
Query: 180 LRK 182
LR+
Sbjct: 494 LRQ 496
>gi|194378588|dbj|BAG63459.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 353
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + KF R I P QLT + C A+ +F
Sbjct: 354 HKDAK-KGFIRLDMSKFQERHEVAKFIGSPPGYVGHEEGGQLTK----KLKQCPNAVVLF 408
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+
Sbjct: 409 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ 466
>gi|348531106|ref|XP_003453051.1| PREDICTED: torsin family protein C9orf167 homolog [Oreochromis
niloticus]
Length = 456
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ L++ V GQ+ A+ + LK++ HN K L +SLHG G GK
Sbjct: 180 DDHVLRYDLEGLEKTLRREVFGQQGAVESLLSHLKDYLSTYVHN-KPLVVSLHGPTGVGK 238
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
+++ + D V ++ H P E + L+ I V +
Sbjct: 239 SHLGRLLAGHFRSVVGDT----LVLQYYVLHHCPQEANALQCASDLSALISEMVERAEEE 294
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFL 178
+FIFDE + +LD ++ + NQ + + N I+LFLSN G I L
Sbjct: 295 EKIPLFIFDEAEHMHHEILDTLLQLVSS----NQSNEYLNAIYLFLSNLGHAHITKHML 349
>gi|348523708|ref|XP_003449365.1| PREDICTED: caseinolytic peptidase B protein homolog [Oreochromis
niloticus]
Length = 641
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 290 LERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 349
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDR 123
K K KG R H+ I P +E L +L + AC
Sbjct: 350 HKDIK-KGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKL---------LRACPN 399
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLE 179
A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI L+
Sbjct: 400 AVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASDEIAQHALQ 459
Query: 180 LRK 182
LR+
Sbjct: 460 LRQ 462
>gi|395521288|ref|XP_003764750.1| PREDICTED: caseinolytic peptidase B protein homolog [Sarcophilus
harrisii]
Length = 669
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 301 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 353
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 354 ------KQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 407
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 408 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 467
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 468 ALQLRQ-EALEL 478
>gi|397489420|ref|XP_003815726.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 5 [Pan
paniscus]
Length = 506
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK + +
Sbjct: 138 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 197
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 198 HKDAK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLKQCPNAVVLF 252
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 253 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ-E 311
Query: 185 CIEF 188
+E
Sbjct: 312 ALEM 315
>gi|126327952|ref|XP_001369464.1| PREDICTED: caseinolytic peptidase B protein homolog [Monodelphis
domestica]
Length = 701
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 333 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 385
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 386 ------KQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 439
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 440 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 499
Query: 177 FLELRK 182
L+LR+
Sbjct: 500 ALQLRQ 505
>gi|397568464|gb|EJK46150.1| hypothetical protein THAOC_35199 [Thalassiosira oceanica]
Length = 1060
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE + V GQE A+ + A++ TK +A + G G GK + + +
Sbjct: 606 LEADITNRVKGQESAVKSVAKAIRRARSGLRDQTKPVATLMFCGPTGVGKTELCKALAQT 665
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
F R KD S ++ +F+ SR+ +V QLT V ++ +FD
Sbjct: 666 YFGREKDIIRIDMSEYMERFSVSRLVGSPPGYVGFEEGGQLT----EAVRRKPHSVVLFD 721
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
E++K + +L++++ +D + + +SF+NTIF+ SN G EI+
Sbjct: 722 ELEKAHEDVLNILLQVMDEGTLTDGKGRTVSFKNTIFIMTSNVGSQEIL 770
>gi|440907877|gb|ELR57966.1| Caseinolytic peptidase B protein-like protein [Bos grunniens mutus]
Length = 707
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|426245081|ref|XP_004016343.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Ovis
aries]
Length = 648
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|426245079|ref|XP_004016342.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Ovis
aries]
Length = 707
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|426245077|ref|XP_004016341.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Ovis
aries]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|62751534|ref|NP_001015625.1| caseinolytic peptidase B protein homolog [Bos taurus]
gi|75070048|sp|Q5E9N5.1|CLPB_BOVIN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|59858135|gb|AAX08902.1| suppressor of potassium transport defect 3 [Bos taurus]
gi|74268281|gb|AAI03470.1| ClpB caseinolytic peptidase B homolog (E. coli) [Bos taurus]
gi|296479834|tpg|DAA21949.1| TPA: caseinolytic peptidase B protein homolog [Bos taurus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|74192958|dbj|BAE34982.1| unnamed protein product [Mus musculus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|74185590|dbj|BAE32689.1| unnamed protein product [Mus musculus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|6677983|ref|NP_033217.1| caseinolytic peptidase B protein homolog [Mus musculus]
gi|2493735|sp|Q60649.1|CLPB_MOUSE RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|563129|gb|AAA62869.1| SKD3 [Mus musculus]
gi|29165797|gb|AAH48175.1| ClpB caseinolytic peptidase B homolog (E. coli) [Mus musculus]
gi|74194260|dbj|BAE24667.1| unnamed protein product [Mus musculus]
gi|74216057|dbj|BAE23708.1| unnamed protein product [Mus musculus]
gi|148684572|gb|EDL16519.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c [Mus
musculus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|354501326|ref|XP_003512743.1| PREDICTED: caseinolytic peptidase B protein homolog [Cricetulus
griseus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|345788353|ref|XP_850367.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Canis lupus familiaris]
Length = 654
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 286 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 338
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 339 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 392
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 393 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 452
Query: 177 FLELRK 182
L+LR+
Sbjct: 453 ALQLRQ 458
>gi|345788349|ref|XP_861363.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Canis lupus familiaris]
Length = 713
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 345 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 397
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 398 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 451
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 452 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 511
Query: 177 FLELRK 182
L+LR+
Sbjct: 512 ALQLRQ 517
>gi|344257982|gb|EGW14086.1| Caseinolytic peptidase B protein-like [Cricetulus griseus]
Length = 676
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 177 FLELRK 182
L+LR+
Sbjct: 475 ALQLRQ 480
>gi|338727038|ref|XP_003365425.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Equus caballus]
Length = 676
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 177 FLELRK 182
L+LR+
Sbjct: 475 ALQLRQ 480
>gi|301783551|ref|XP_002927187.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Ailuropoda melanoleuca]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|301783549|ref|XP_002927186.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Ailuropoda melanoleuca]
gi|281340521|gb|EFB16105.1| hypothetical protein PANDA_016950 [Ailuropoda melanoleuca]
Length = 707
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|226501824|ref|NP_001141154.1| uncharacterized protein LOC100273240 [Zea mays]
gi|194702950|gb|ACF85559.1| unknown [Zea mays]
Length = 707
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|194213476|ref|XP_001917508.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Equus caballus]
Length = 706
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 177 FLELRK 182
L+LR+
Sbjct: 505 ALQLRQ 510
>gi|47718016|gb|AAH70917.1| ClpB caseinolytic peptidase B homolog (E. coli) [Rattus norvegicus]
gi|149068722|gb|EDM18274.1| rCG39494, isoform CRA_a [Rattus norvegicus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|26328241|dbj|BAC27861.1| unnamed protein product [Mus musculus]
Length = 678
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|444731498|gb|ELW71851.1| Caseinolytic peptidase B protein like protein [Tupaia chinensis]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAEH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|12621118|ref|NP_075236.1| caseinolytic peptidase B protein homolog [Rattus norvegicus]
gi|25009257|sp|Q9WTT2.1|CLPB_RAT RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|4958935|dbj|BAA78095.1| SKD3 [Rattus norvegicus]
Length = 677
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L+QH+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|344296832|ref|XP_003420106.1| PREDICTED: caseinolytic peptidase B protein homolog [Loxodonta
africana]
Length = 706
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 177 FLELRKSECIEF 188
L+LR+ E +E
Sbjct: 505 ALQLRQ-EALEL 515
>gi|432884578|ref|XP_004074500.1| PREDICTED: torsin-4A-like [Oryzias latipes]
Length = 431
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ L++ V+GQ+ A+ + L+++ HN K L +S++G G GK
Sbjct: 163 DDHVLRYDLEGLEKTLRREVYGQQGAVGGLLSHLQDYLSTYVHN-KPLVVSVNGPTGVGK 221
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+++ + D V ++ H P E L+ I V DRA
Sbjct: 222 SHLGRLLAGHFRSVIGDA----LVLQYYVLHHCPQEADAPHCARNLSTRISDMV---DRA 274
Query: 125 -------IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSG 169
+FIFDE + +LD + + + N I+LFLSN G
Sbjct: 275 EEEEKIPLFIFDEAEHMHGEILDALWTLVTSRQANE---YMNAIYLFLSNLG 323
>gi|410972745|ref|XP_003992817.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Felis catus]
Length = 705
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 177 FLELRK 182
L+LR+
Sbjct: 505 ALQLRQ 510
>gi|410972743|ref|XP_003992816.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Felis catus]
Length = 675
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 177 FLELRK 182
L+LR+
Sbjct: 475 ALQLRQ 480
>gi|410972741|ref|XP_003992815.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Felis catus]
Length = 646
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 279 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 331
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 332 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 385
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 386 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 445
Query: 177 FLELRK 182
L+LR+
Sbjct: 446 ALQLRQ 451
>gi|71029588|ref|XP_764437.1| ATP-dependent Clp protease ATP-binding subunit [Theileria parva
strain Muguga]
gi|68351391|gb|EAN32154.1| ATP-dependent Clp protease ATP-binding subunit, putative [Theileria
parva]
Length = 900
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 71
+R +EE L + V GQE A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 564 IRNMEEDLHKMVIGQEEAVKNVCKAIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARAL 623
Query: 72 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + D H + + P QLT + SN ++ +
Sbjct: 624 TKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTEKVKSN----PYSVVM 679
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
FDE++K +L++++ ++ + + ISF+NTI + SN+G I +
Sbjct: 680 FDEIEKAHHDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRS 732
>gi|395814901|ref|XP_003780976.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Otolemur garnettii]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|395814899|ref|XP_003780975.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Otolemur garnettii]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|395814897|ref|XP_003780974.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Otolemur garnettii]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|426369661|ref|XP_004051803.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4
[Gorilla gorilla gorilla]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|426369659|ref|XP_004051802.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Gorilla gorilla gorilla]
Length = 662
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 346
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 347 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 400
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 401 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 460
Query: 177 FLELRK 182
L+LR+
Sbjct: 461 ALQLRQ 466
>gi|426369657|ref|XP_004051801.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Gorilla gorilla gorilla]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|426369655|ref|XP_004051800.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Gorilla gorilla gorilla]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|84997423|ref|XP_953433.1| endopeptidase (CLP homologue) ATP-binding chain [Theileria annulata
strain Ankara]
gi|65304429|emb|CAI76808.1| endopeptidase (CLP homologue) ATP-binding chain, putative
[Theileria annulata]
Length = 916
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 71
+R +EE L + V GQE A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 580 IRNMEEDLHKMVIGQEEAVKNVCKAIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARAL 639
Query: 72 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + D H + + P QLT + SN ++ +
Sbjct: 640 TKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTEKVKSN----PYSVVM 695
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
FDE++K +L++++ ++ + + ISF+NTI + SN+G I +
Sbjct: 696 FDEIEKAHHDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRS 748
>gi|197098332|ref|NP_001127139.1| caseinolytic peptidase B protein homolog [Pongo abelii]
gi|55725021|emb|CAH89378.1| hypothetical protein [Pongo abelii]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|13540606|ref|NP_110440.1| caseinolytic peptidase B protein homolog isoform 1 [Homo sapiens]
gi|25009267|sp|Q9H078.1|CLPB_HUMAN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
Full=Suppressor of potassium transport defect 3
gi|12053313|emb|CAB66843.1| hypothetical protein [Homo sapiens]
gi|13623579|gb|AAH06404.1| ClpB caseinolytic peptidase B homolog (E. coli) [Homo sapiens]
gi|119595264|gb|EAW74858.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a
[Homo sapiens]
gi|157928554|gb|ABW03573.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
construct]
gi|157929202|gb|ABW03886.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
construct]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|410045552|ref|XP_003952017.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|402894552|ref|XP_003910418.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Papio anubis]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|402894550|ref|XP_003910417.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Papio anubis]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|402894548|ref|XP_003910416.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Papio anubis]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|385719198|ref|NP_001245323.1| caseinolytic peptidase B protein homolog isoform 4 [Homo sapiens]
Length = 662
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 294 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 346
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 347 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 400
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 401 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 460
Query: 177 FLELRK 182
L+LR+
Sbjct: 461 ALQLRQ 466
>gi|385719196|ref|NP_001245322.1| caseinolytic peptidase B protein homolog isoform 3 [Homo sapiens]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|355752436|gb|EHH56556.1| Suppressor of potassium transport defect 3 [Macaca fascicularis]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|343961061|dbj|BAK62120.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|194378488|dbj|BAG63409.1| unnamed protein product [Homo sapiens]
Length = 648
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|410045547|ref|XP_003952015.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
gi|410045550|ref|XP_003952016.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
troglodytes]
gi|410334181|gb|JAA36037.1| ClpB caseinolytic peptidase B homolog [Pan troglodytes]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|119595266|gb|EAW74860.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c
[Homo sapiens]
Length = 690
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|114639256|ref|XP_001174710.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
troglodytes]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|386782123|ref|NP_001248231.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
gi|355566841|gb|EHH23220.1| Suppressor of potassium transport defect 3 [Macaca mulatta]
gi|383421895|gb|AFH34161.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|67969551|dbj|BAE01124.1| unnamed protein product [Macaca fascicularis]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|67970204|dbj|BAE01446.1| unnamed protein product [Macaca fascicularis]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|385719194|ref|NP_001245321.1| caseinolytic peptidase B protein homolog isoform 2 [Homo sapiens]
gi|10435042|dbj|BAB14467.1| unnamed protein product [Homo sapiens]
gi|119595265|gb|EAW74859.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_b
[Homo sapiens]
Length = 677
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|322792402|gb|EFZ16386.1| hypothetical protein SINV_11479 [Solenopsis invicta]
Length = 642
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 14/176 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LKQH+ GQE IS + ++ L G G GK + + + I
Sbjct: 293 LEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 352
Query: 76 FKRYKDK------GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K D + H+ I P QLT + C A+ +FD
Sbjct: 353 HKNKLDAFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKLL----KKCPSAVVLFD 408
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
EVDK +L V++ D + + I +N IF+ SN G EI L+LR
Sbjct: 409 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAEHALQLR 464
>gi|213512393|ref|NP_001133269.1| Torsin family protein C9orf167 homolog [Salmo salar]
gi|209148449|gb|ACI32938.1| Torsin family protein C9orf167 homolog [Salmo salar]
Length = 439
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ L + V GQ+ A+ + L+++ Y ++K L +SLHG G GK
Sbjct: 164 DDHVLKYDLGGLEKTLCREVFGQQGAMDALLAQLRDYLST-YVHSKPLVLSLHGPSGVGK 222
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + ++ V ++ H P E+ L+ + V +
Sbjct: 223 SHVGRLLAG----HFRSVVGEPLVLQYFVLHHCPLEDDAWRCARALSILVSETVLRAEEE 278
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+FIFDE + LLD + + + + N ++LFLSN G T I
Sbjct: 279 EKIPLFIFDEAEHLYPELLDALSDLVRSN---RSNEYLNAVYLFLSNQGHTHI 328
>gi|403262178|ref|XP_003923472.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
[Saimiri boliviensis boliviensis]
Length = 648
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|403262176|ref|XP_003923471.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Saimiri boliviensis boliviensis]
Length = 707
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|403262174|ref|XP_003923470.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Saimiri boliviensis boliviensis]
Length = 677
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|296217137|ref|XP_002754879.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Callithrix jacchus]
Length = 648
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|296217135|ref|XP_002754878.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Callithrix jacchus]
Length = 707
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|351698232|gb|EHB01151.1| Caseinolytic peptidase B protein-like protein [Heterocephalus
glaber]
Length = 726
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 360 LEQRLREHIIGQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 412
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 413 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 466
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 467 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 526
Query: 177 FLELRK 182
L+LR+
Sbjct: 527 ALQLRQ 532
>gi|291384328|ref|XP_002708761.1| PREDICTED: caseinolytic peptidase B [Oryctolagus cuniculus]
Length = 706
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLREHIIGQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 177 FLELRK 182
L+LR+
Sbjct: 505 ALQLRQ 510
>gi|417403825|gb|JAA48699.1| Putative caseinolytic peptidase b protein [Desmodus rotundus]
Length = 676
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 414
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 177 FLELRK 182
L+LR+
Sbjct: 475 ALQLRQ 480
>gi|348555399|ref|XP_003463511.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
[Cavia porcellus]
Length = 704
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 338 LEQRLREHIIGQENAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 390
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 391 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 444
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 445 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 504
Query: 177 FLELRK 182
L+LR+
Sbjct: 505 ALQLRQ 510
>gi|348555397|ref|XP_003463510.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
[Cavia porcellus]
Length = 674
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 308 LEQRLREHIIGQENAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 360
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 361 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 414
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 415 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 474
Query: 177 FLELRK 182
L+LR+
Sbjct: 475 ALQLRQ 480
>gi|344258466|gb|EGW14570.1| Torsin-1B [Cricetulus griseus]
Length = 158
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ RK E I
Sbjct: 1 MDKLHPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEI 60
Query: 187 EF 188
+
Sbjct: 61 QL 62
>gi|397489418|ref|XP_003815725.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Pan
paniscus]
Length = 648
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 280 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 332
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 333 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 386
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 387 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 446
Query: 177 FLELRK 182
L+LR+
Sbjct: 447 ALQLRQ 452
>gi|397489416|ref|XP_003815724.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
paniscus]
Length = 662
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 294 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 346
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 347 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 400
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 401 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 460
Query: 177 FLELRK 182
L+LR+
Sbjct: 461 ALQLRQ 466
>gi|397489414|ref|XP_003815723.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Pan
paniscus]
Length = 707
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>gi|397489412|ref|XP_003815722.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Pan
paniscus]
Length = 677
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L++H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>gi|449485970|ref|XP_002187730.2| PREDICTED: caseinolytic peptidase B protein homolog [Taeniopygia
guttata]
Length = 576
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 17/184 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G GK + I
Sbjct: 207 LEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSEKGKTELAKQTAKYI 266
Query: 76 FKRYKDKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R + +F R I P QLT + C A+ +F
Sbjct: 267 HKDIK-KGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLT----KKLRQCPNAVVLF 321
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEVDK +L +++ D + + I ++ IF+ SN EI L+LR+ E
Sbjct: 322 DEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQ-E 380
Query: 185 CIEF 188
+E
Sbjct: 381 AMEM 384
>gi|403298507|ref|XP_003940059.1| PREDICTED: torsin-1B [Saimiri boliviensis boliviensis]
Length = 158
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+ RK E I
Sbjct: 1 MDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDI 60
Query: 187 EF 188
+
Sbjct: 61 QL 62
>gi|339243907|ref|XP_003377879.1| chaperone protein ClpB [Trichinella spiralis]
gi|316973256|gb|EFV56876.1| chaperone protein ClpB [Trichinella spiralis]
Length = 408
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Query: 17 EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIF 76
EE++K+++ GQ+ AIS + A++ ++ L G G GK + + ++
Sbjct: 68 EERVKKNMIGQDGAISSVASAIRRRENGWTNDEHPLVFLFLGSSGVGKTELAKQVAQYLY 127
Query: 77 KRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
K K D + H+ I P Q + ++T C A+ +FDE
Sbjct: 128 KDNKKSFIRIDMSEYQEKHEVAKFIGSPP----GYVGHQQGGQLTKSLTECPNAVVLFDE 183
Query: 131 VDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
V+K +L +++ D + + + IF+ SN EI + L+LRK
Sbjct: 184 VEKAHPDVLTIMLQLFDEGRLTDGMGKTVDCKEAIFIMTSNLAAEEIASHALKLRK 239
>gi|348681222|gb|EGZ21038.1| hypothetical protein PHYSODRAFT_557277 [Phytophthora sojae]
Length = 366
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 20 LKQHVHGQELAISHICGALKN-HFQNRYHNTKA-LAISLHGLPGTGKNYVTDFIVSSIFK 77
L+Q++ GQE A+ + GA++ F +A L +++ G G GK +++ I ++FK
Sbjct: 24 LQQNLKGQERAVESVVGAIEAWEFSRTSTKDRAPLVLAITGPTGVGKTEMSNLIAEALFK 83
Query: 78 RYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQLTNW--IISNVTACD-RAIFIF 128
R K +K + F N N ++ Y Q+ + ++ C +A+ +
Sbjct: 84 RKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRHELAEHLHHCSGKAVVVI 143
Query: 129 DEVDKFPKGLLDVIIPFIDH--------HAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
DEV K LDV++ + H V I N IF+ +S+ G ++ ++
Sbjct: 144 DEVQKVIPHTLDVLMEAVSESSQFSYYKHGVTKNIDTANVIFVLVSDIGVADMEQVMIQY 203
Query: 181 RKSECIEFI 189
E I +
Sbjct: 204 ETREEIPTV 212
>gi|406923818|gb|EKD60811.1| hypothetical protein ACD_54C00541G0002 [uncultured bacterium]
Length = 341
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 68
+ +R LE+ LK+ V GQ+ A+ +C A+K K + L P G GK V
Sbjct: 24 AETLRDLEKTLKRVVFGQDKAVEALCSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVA 83
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ SS+ + S ++ K SR+ +V + + + C + +
Sbjct: 84 KQLASSLGVKLLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGVDQDPHC---VLL 140
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
DE++K + ++++ +DH + + + F+N I + SN+G TE
Sbjct: 141 LDEMEKAHPDVYNILLQVMDHGKLTDHNGRTVDFRNVILIMTSNAGATE 189
>gi|269114792|ref|YP_003302555.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
gi|268322417|emb|CAX37152.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
Length = 716
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
Q + L E LK+ V GQ+ AI I A+K N + + L G G GK +
Sbjct: 416 QKQKILNLSETLKKRVKGQDQAIELISDAIKRSKANINDPNRPIGSFLFLGPTGVGKTEL 475
Query: 68 TDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 115
+ ++F Y +K S+ + I + N QLT I
Sbjct: 476 AKSLAEALFDDENHIVRLDMSEYMEKHSVSKLIGSPPGYIGYDNGG-------QLTEKIR 528
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGT 171
N +I +FDE++K +L++++ +D+ + + ++F+NTI + SN G +
Sbjct: 529 QN----PYSIVLFDEIEKANSDVLNILLQILDNGTLTDSTGRVVNFKNTIIIMTSNIGSS 584
Query: 172 EIMNTFLEL 180
EI+N L +
Sbjct: 585 EIINKSLTI 593
>gi|421877059|ref|ZP_16308610.1| Putative ATP-dependent Clp protease [Leuconostoc citreum LBAE C10]
gi|372557190|emb|CCF24730.1| Putative ATP-dependent Clp protease [Leuconostoc citreum LBAE C10]
Length = 632
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+S+ R+L +LK HV GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSHVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F + + ++ QLT + V A+
Sbjct: 342 TAKQLALNLFGNAQN-----FIRFDMSEFKFAGTS-LERFKDQLT----TRVRHTPYAVL 391
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|406986498|gb|EKE07077.1| ATP-dependent Clp protease regulatory subunit [uncultured
bacterium]
Length = 918
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+S + LE+++ + V GQ+LA+ + AL+ + +A L G G GK +
Sbjct: 619 ESQKLMRLEQEMHKRVIGQDLAVELVANALRRARAEMRSQKRPIANFLFLGPTGVGKTEL 678
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL------QLTNWIISNVTAC 121
T I F G R + S N S+YRL Q T + V
Sbjct: 679 TKTIAEVYF-----GGEDRMIRMDMSEYQDTN----SIYRLIGQPGQQGTGLLTEAVRQN 729
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEI---M 174
A+ + DE++K K +L++ + D +V I F NTI + SN+G + + M
Sbjct: 730 PFALVLLDELEKADKNVLNLFLQVFDDGRLTDSVGRVIDFTNTIIIATSNAGTSYVQSQM 789
Query: 175 NTFLEL 180
N ++L
Sbjct: 790 NAGVDL 795
>gi|261755133|ref|ZP_05998842.1| ATP-dependent Clp protease [Brucella suis bv. 3 str. 686]
gi|261744886|gb|EEY32812.1| ATP-dependent Clp protease [Brucella suis bv. 3 str. 686]
Length = 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 5 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 64
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + C + + DE++K
Sbjct: 65 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPHC---VLLLDEIEK 121
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
L ++++ +DH A+ + +I F+N I + +N+G +++ +
Sbjct: 122 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDMAKAAI 170
>gi|322378503|ref|ZP_08052953.1| ATP-dependent C1p protease (clpA) [Helicobacter suis HS1]
gi|321149064|gb|EFX43514.1| ATP-dependent C1p protease (clpA) [Helicobacter suis HS1]
Length = 741
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 7 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKN 65
F + ++++ LEEQ+K+ V QE+AIS + A+K H K +A L G G GK
Sbjct: 428 FEKKNHLKNLEEQIKKEVFAQEIAISKLVSAIKIHASGLIATKKPVASFLFVGPSGVGKT 487
Query: 66 YVTDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+ + + +R+ D + H + I P+ + +I+ +
Sbjct: 488 ELAKVLAKHMHLHLERF-DMSEYKEAHSISKLIGAPS----GYVGFEQGGLLINAIRKHP 542
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT-F 177
R + + DE++K + D+++ D+ ++ + + F + I + SN+G + F
Sbjct: 543 RCVLLLDEIEKAHPNIYDLLLQITDNASLTDNSGKKGDFSHAILILTSNAGSDALGQMGF 602
Query: 178 LE 179
LE
Sbjct: 603 LE 604
>gi|322380162|ref|ZP_08054401.1| ATP-dependent C1p protease [Helicobacter suis HS5]
gi|321147413|gb|EFX42074.1| ATP-dependent C1p protease [Helicobacter suis HS5]
Length = 741
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 7 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKN 65
F + ++++ LEEQ+K+ V QE+AIS + A+K H K +A L G G GK
Sbjct: 428 FEKKNHLKNLEEQIKKEVFAQEIAISKLVSAIKIHASGLIATKKPVASFLFVGPSGVGKT 487
Query: 66 YVTDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+ + + +R+ D + H + I P+ + +I+ +
Sbjct: 488 ELAKVLAKHMHLHLERF-DMSEYKEAHSISKLIGAPS----GYVGFEQGGLLINAIRKHP 542
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT-F 177
R + + DE++K + D+++ D+ ++ + + F + I + SN+G + F
Sbjct: 543 RCVLLLDEIEKAHPNIYDLLLQITDNASLTDNSGKKGDFSHAILILTSNAGSDALGQMGF 602
Query: 178 LE 179
LE
Sbjct: 603 LE 604
>gi|223993261|ref|XP_002286314.1| member of the clp superfamily, regulatory gamma subunit
[Thalassiosira pseudonana CCMP1335]
gi|220977629|gb|EED95955.1| member of the clp superfamily, regulatory gamma subunit
[Thalassiosira pseudonana CCMP1335]
Length = 782
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE + + V GQ+ A++ + A++ TK +A L G G GK + + +
Sbjct: 471 LEADIAKRVKGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPTGVGKTELCKALAQT 530
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+ R KD S ++ +F+ SR+ +V QLT I ++ +FD
Sbjct: 531 YYGREKDIIRIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRK----PHSVVLFD 586
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
E++K + +L+V++ +D ++ + +SF+N IF+ SN G EI+
Sbjct: 587 ELEKAHEDVLNVLLQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEIL 635
>gi|410909810|ref|XP_003968383.1| PREDICTED: caseinolytic peptidase B protein homolog [Takifugu
rubripes]
Length = 660
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 313 LERRLKEHIVGQEGAINTVASAIRRKQNGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 372
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFP-----NENHVSLYRLQLTNWIISNVTACDR 123
K K KG R H+ I P +E L +L + C
Sbjct: 373 HKDIK-KGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGHLTKL---------LKECPN 422
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLE 179
A+ +FDEVDK +L +++ D + + I ++ +F+ SN EI L
Sbjct: 423 AVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAVFIMTSNVASDEIAQHALH 482
Query: 180 LRK 182
LR+
Sbjct: 483 LRQ 485
>gi|91080595|ref|XP_973935.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
(Suppressor of potassium transport defect 3) [Tribolium
castaneum]
gi|270005512|gb|EFA01960.1| hypothetical protein TcasGA2_TC007578 [Tribolium castaneum]
Length = 593
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 14/177 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LEE+LK + GQE AI+ + ++ + L G G GK + + + I
Sbjct: 240 LEERLKTRIVGQEGAITIVSATIRRKENGWGDDEHPLVFLFLGSSGIGKTELAKQLAAYI 299
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K D + H+ I P QLT S + C A+ +FD
Sbjct: 300 HKEKPQAFIRLDMSEYQEKHEVAKLIGAPPGYIGHDEGGQLT----SRLKQCPNAVVLFD 355
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
EVDK +L V++ D + + I +N IF+ SN EI L+LR+
Sbjct: 356 EVDKAHPDVLTVLLQLFDEGRLTDGHGKTIECKNAIFIMTSNLASDEIAQHGLKLRQ 412
>gi|292621865|ref|XP_002664799.1| PREDICTED: caseinolytic peptidase B protein homolog, partial [Danio
rerio]
Length = 409
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+H+ GQE AI+ + A++ Y L G G GK + + +
Sbjct: 50 LERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYM 109
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K KG R H+ I P QLT + + + A+ +F
Sbjct: 110 HKDIK-KGFIRMDMSEFQEKHEVAKFIGSPPGYVGHDEGGQLTKQLKQSPS----AVVLF 164
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
DEV+K +L V++ D + + I ++ IF+ SN+ EI L+LR+
Sbjct: 165 DEVEKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAIFIMTSNAASDEIAQHALQLRQE 223
>gi|339496405|ref|ZP_08657381.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc pseudomesenteroides KCTC 3652]
Length = 361
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 63 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 122
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F SL R + + + + V A+
Sbjct: 123 TAKQLALNLFGNKQN-----FIRFDMSEFKFAG---TSLERFK--DQLTTRVRHTPYAVL 172
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 173 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 225
>gi|429329887|gb|AFZ81646.1| ATP-dependent Clp protease ATP-binding subunit, putative [Babesia
equi]
Length = 907
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGAL---KNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
+R +E +L + + GQ+ A+ +IC A+ K H +N + G PG GK+ V
Sbjct: 576 IRNMESELHKMIVGQDEAVKNICKAIRRAKTHIKNPQRPIGSFLFC--GPPGVGKSEVAK 633
Query: 70 FIVSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 125
+ IF + D H + + P QLT I N ++
Sbjct: 634 SLTKYIFAKENLIRVDMSEYSESHSISRILGSPPGYKGHDSGGQLTEKIRHN----PYSV 689
Query: 126 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG------GTEIMN 175
+FDE++K +L++++ ++ V + +SF+NTI + SN G +++ N
Sbjct: 690 IMFDEIEKAHSDILNILLQILEDGNVTDAKNQMVSFKNTIIIMTSNLGSNVIQRASKVSN 749
Query: 176 TF 177
TF
Sbjct: 750 TF 751
>gi|315453884|ref|YP_004074154.1| ATP-dependent CLP protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
gi|315132936|emb|CBY83564.1| ATP-dependent CLP protease ATP-binding subunit,Chaperone protein
clpB [Helicobacter felis ATCC 49179]
Length = 858
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
K +Q RVL EE+L++ V GQE AI I A+K + +T+ + L G G
Sbjct: 553 KMLQEERERVLHIEEELRKSVVGQENAILAIAKAIKRNKAGLDDSTRPIGSFLFLGPTGV 612
Query: 63 GKNYVTDFIVSSIFKRYKD---KGTSRFVHKF-NSRIHFPNENHVSLYR-LQLTNWIISN 117
GK + +F K+ S ++ K SR+ +V QLT W
Sbjct: 613 GKTQSAKTLAKFLFDSQKNFIRLDMSEYMEKHAASRLVGAPPGYVGYEEGGQLTEW---- 668
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDH-HAVYN---QISFQNTIFLFLSNSGGTEI 173
V ++ +FDEV+K + ++++ +D H N ++ F+NTI + SN G +I
Sbjct: 669 VRRSPYSVILFDEVEKAHPDVFNLLLQVLDEGHLTDNKGVKVDFKNTIIILTSNIGSEKI 728
Query: 174 M 174
+
Sbjct: 729 I 729
>gi|407001910|gb|EKE18798.1| hypothetical protein ACD_9C00232G0001, partial [uncultured
bacterium]
Length = 436
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE L + V GQ+ AI + GAL+ ++ K + L G G GK T ++
Sbjct: 150 LEALLHRQVIGQDEAIKQVSGALRRARSGIGNSDKPVGSFLFLGPTGVGKTE-TAKALAK 208
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFDEVD 132
I+ +DK + +F + P+ + + RL +++ + ++ + DE++
Sbjct: 209 IYFGSEDKMIRLDMSEFQT----PDSIDRLLGSSRLDQQGRLVTQIKDNPYSLLLLDEIE 264
Query: 133 KFPKGLLDVIIPFID----HHAVYNQISFQNTIFLFLSNSGGTEI 173
K +LD+ + +D + A N+ISF+NT+ + SN+G I
Sbjct: 265 KAYPEILDIFLQILDEGYVNDAFGNKISFRNTMIIATSNAGAAVI 309
>gi|74221355|dbj|BAE42156.1| unnamed protein product [Mus musculus]
Length = 159
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 53
>gi|307212388|gb|EFN88178.1| Caseinolytic peptidase B protein-like protein [Harpegnathos
saltator]
Length = 502
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 14/176 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LKQH+ GQE IS + ++ L G G GK + + + I
Sbjct: 193 LEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 252
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K D + H+ I P QLT + C A+ +FD
Sbjct: 253 HKNKTNSFIRLDMSEYQEKHEAAKLIGAPPGYIGHDSGGQLTKLL----KQCPTAVVLFD 308
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
EVDK +L V++ D + + I + IF+ SN G EI ++LR
Sbjct: 309 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKEAIFIMTSNLGNKEIAEHAIQLR 364
>gi|344251575|gb|EGW07679.1| Torsin-2A [Cricetulus griseus]
Length = 159
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKLPPGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 53
>gi|328723476|ref|XP_001943960.2| PREDICTED: caseinolytic peptidase B protein homolog [Acyrthosiphon
pisum]
Length = 589
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 16/180 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LKQ + GQE AI+ + A++ + L G G GK + I S +
Sbjct: 259 LELRLKQKIIGQENAINEVSSAIRRKENGWTDDEHPLVFLFLGSSGIGKTELAKQIASYL 318
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K KD G R H+ I P ++ + A+ +F
Sbjct: 319 HKNNKD-GFIRLDMSEYQEKHEVAKMIGSP----PGYVGYDDGGYLTKQLAKNPNAVVLF 373
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
DEV+K +L +++ D + + I +N IF+ SN EI LELR +
Sbjct: 374 DEVEKAHTDILTILLQLFDEGRITDGKGKTIVCKNAIFVMTSNLASEEIAEHALELRNEQ 433
>gi|260811155|ref|XP_002600288.1| hypothetical protein BRAFLDRAFT_118278 [Branchiostoma floridae]
gi|229285574|gb|EEN56300.1| hypothetical protein BRAFLDRAFT_118278 [Branchiostoma floridae]
Length = 275
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 78 RYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA-IFIFDEVDKFPK 136
R +D+ HKF HFP+ YR Q+ +W+ NV+ DR +F+FDE++
Sbjct: 6 RKRDQSCGVRAHKFIILDHFPHPGEAWQYREQVRDWVRGNVSHSDRQHLFVFDEMETVYP 65
Query: 137 GLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
L + ++ ++ NT+F+F+
Sbjct: 66 SLAEGLLSLLEEDT-------SNTMFIFI 87
>gi|354721138|ref|NP_001238947.1| prosalusin isoform f [Homo sapiens]
gi|354721147|ref|NP_001238950.1| prosalusin isoform f [Homo sapiens]
gi|395740999|ref|XP_002820288.2| PREDICTED: torsin-2A [Pongo abelii]
gi|410043203|ref|XP_003951579.1| PREDICTED: prosalusin [Pan troglodytes]
gi|441622996|ref|XP_004088877.1| PREDICTED: prosalusin [Nomascus leucogenys]
gi|119608096|gb|EAW87690.1| torsin family 2, member A, isoform CRA_a [Homo sapiens]
Length = 159
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
+DK P GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 1 MDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 53
>gi|428171251|gb|EKX40169.1| hypothetical protein GUITHDRAFT_113649 [Guillardia theta CCMP2712]
Length = 403
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 46 YHNTKALA-----ISLHGLPGTGKNYVTDFIVSSIFKRY--KDKGTSRFV---HKFNSRI 95
Y N +AL + G G GK+ D + SS+F R+ ++ +F+ ++SR
Sbjct: 106 YENPQALKARPLFMHFSGPTGVGKSLTADIVASSMFNRHNADNRLCGKFILQMRAYSSRN 165
Query: 96 HFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFID 147
F H+ Y + + ++ C R++ IFDE+ + LLD II D
Sbjct: 166 PF----HLEKYEQDIRRKVGEQLSHCPRSVLIFDEIQSISEQLLDSIIEIFD 213
>gi|339452383|ref|ZP_08655753.1| hypothetical protein LlacK3_15184 [Leuconostoc lactis KCTC 3528]
gi|399517954|ref|ZP_10759488.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
gi|398647135|emb|CCJ67515.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
Length = 632
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+S+ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F + + ++ QLT + V A+
Sbjct: 342 TAKQLALNLFGNAQN-----FIRFDMSEFKFAGTS-LERFKDQLT----TRVRHTPYAVL 391
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|296110154|ref|YP_003620535.1| hypothetical protein LKI_00115 [Leuconostoc kimchii IMSNU 11154]
gi|295831685|gb|ADG39566.1| hypothetical protein LKI_00115 [Leuconostoc kimchii IMSNU 11154]
Length = 632
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+S+ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTSDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F + + ++ QLT + V A+
Sbjct: 342 TAKQLALNLFGNAQN-----FIRFDMSEFKFAGTS-LERFKDQLT----TRVRHTPYAVL 391
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVVMTTNSGATAVMN 444
>gi|332026312|gb|EGI66446.1| Caseinolytic peptidase B protein-like protein [Acromyrmex
echinatior]
Length = 609
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 14/176 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LKQH+ GQE +IS + ++ L G G GK + + + I
Sbjct: 256 LEQRLKQHIVGQEGSISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYI 315
Query: 76 FKRYKDK------GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ D + H+ I P QLT + +A + +FD
Sbjct: 316 HRNKSDSFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKLLKKYPSA----VVLFD 371
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
EVDK +L V++ D + + I +N IF+ SN G EI ++LR
Sbjct: 372 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAEHAIQLR 427
>gi|325179639|emb|CCA14037.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 434
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 20 LKQHVHGQELAISHICGALKNHFQNR--YHNTKALAISLHGLPGTGKNYVTDFIVSSIFK 77
L +H+ Q LA+ I A++ R + L ++ G GTGK + + SIFK
Sbjct: 78 LTEHIIAQHLAVESIIAAIEAWEFARPTAKDRIPLVLAFTGPTGTGKTETSYVLARSIFK 137
Query: 78 RYK-----DKGTSRFVHKFNSRIHFPN-ENHVSLYRLQLTNWIISNVTACD-RAIFIFDE 130
+ DK + + N N V+ Y + + ++ ++ C AI +FDE
Sbjct: 138 HTRNLYKSDKKVASGLLMIRGEDFSDNFTNPVTTYHRLIKSMLVDHLIHCSGNAIVVFDE 197
Query: 131 VDKFPKGLLDVIIPFIDHHA--------VYNQISFQNTIFLFLSNSGGTEIMN 175
V K LDV++ + + A V + + N IF+ +S+ G +++M
Sbjct: 198 VQKVIPHTLDVLMEAMSNSAQLSYTVGGVTSTLDTSNVIFILISDIGVSQMMG 250
>gi|26386009|dbj|BAC25585.1| unnamed protein product [Mus musculus]
Length = 111
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 TKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR 107
+K L +SLHG GTGK+YV+ + +F +D S VH F+ IHFP+ + Y+
Sbjct: 56 SKPLVLSLHGWTGTGKSYVSSLLAQHLF---RDGLRSPHVHHFSPIIHFPHPSRTEQYK 111
>gi|407003410|gb|EKE19983.1| ATPase AAA-2 protein [uncultured bacterium]
Length = 816
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNY 66
I+ + LE L + V GQ+ AIS + AL+ ++ K + L G G GK
Sbjct: 522 IERKKLMNLEALLHRQVIGQDEAISQVSSALRRARAGVGNSEKPVGSFLFLGPTGVGKTE 581
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNW--IISNVTACDRA 124
+ F + + S PN L QL ++S + +
Sbjct: 582 TAKALAKVYFG-----SVDKMIRLDMSEFQTPNSIDRLLGSSQLNQQGRLVSQIKDNPYS 636
Query: 125 IFIFDEVDKFPKGLLDVIIPFID----HHAVYNQISFQNTIFLFLSNSGGTEI 173
+ + DE++K +LD+ + +D + A N+ISF+NT+ + SN+G + I
Sbjct: 637 LLLLDEIEKAYPEILDIFLQILDEGFVNDAFGNRISFRNTMIIATSNAGSSLI 689
>gi|421877587|ref|ZP_16309131.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C10]
gi|421879845|ref|ZP_16311299.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C11]
gi|372556601|emb|CCF25251.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C10]
gi|390446250|emb|CCF27419.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Leuconostoc
citreum LBAE C11]
Length = 629
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+++ R+L QLK V GQ+ + I + N NTK + G G GK
Sbjct: 280 QTTDERLLNLSTQLKSRVIGQDHPLDKITMKITNREAGLGDNTKPESFLFLGPTGVGKTE 339
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ + +F K F+ S F SL R + N + + V A+
Sbjct: 340 TAKQLANLLFGDAKS-----FIRFDMSEFKFAG---TSLERFK--NQLTTKVRHNPYAVL 389
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG IMN
Sbjct: 390 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIVIMTTNSGAKAIMN 442
>gi|193216464|ref|YP_001999706.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma arthritidis
158L3-1]
gi|193001787|gb|ACF07002.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma arthritidis
158L3-1]
Length = 714
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 5 DKFIQSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPG 61
+K ++S ++ LE L V GQE AI + A++ N + + L G G
Sbjct: 405 NKLLESQKTKLMNLENVLGTRVKGQEQAIKVVSEAIQRAKANINDPNRPIGSFLFLGPTG 464
Query: 62 TGKNYVTDFIVSSIF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIIS 116
GK + + +F R S ++ K + S++ ++ + QLT +
Sbjct: 465 VGKTELARTLADCLFDDENRIIRLDMSEYMEKHSVSKLIGSPPGYIGFEKGGQLTEKVRQ 524
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
N +I +FDE++K +L++++ +D+ A+ + +++F+NTI + SN G E
Sbjct: 525 N----PYSIVLFDEIEKANSDVLNLLLQIMDNGALTDSRGKKVNFRNTIIIMTSNIGSEE 580
Query: 173 IMNTFLELRKSECI 186
I+N L+ ++++ +
Sbjct: 581 ILNKTLDEQRTKTL 594
>gi|307107907|gb|EFN56148.1| hypothetical protein CHLNCDRAFT_51790 [Chlorella variabilis]
Length = 389
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 8/168 (4%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L + GQELA+ I A+ +H + + L +SLHG PG GK+ ++
Sbjct: 35 LEPFLSSQMVGQELALRQISDAICDHLAQQ-EPRRPLVLSLHGPPGVGKSMFHHLAAQAL 93
Query: 76 FKR-----YKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ R + G +K + + E + L L ++ ++ ++ + +E
Sbjct: 94 YNRRIHDALRCPGLDCAGYKVLYGMDYTAEERQRQHTL-LRAALLEHLRQAPESLLVVEE 152
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
DK + +++ V N +S I + SN G TE+ + L
Sbjct: 153 YDKLDCPMRGFFRQLLENGQVAN-VSLNKAIVVLESNLGYTELHDLLL 199
>gi|298713429|emb|CBJ33632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 484
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
V L+ + Q LA+ + GAL + H+ + + L ++L G GTGK +
Sbjct: 64 VEAARRALQDGILAQPLALESLDGALSSWHYSRQSDRYEPLVVALTGSTGTGKTETAWVL 123
Query: 72 VSSIF-KRYKDKGTSRFVHK-------FNSRIHFPNENHVSLYRLQLTNWIISNVTAC-D 122
++ KR + G +R + + + + E + SL R +L + C
Sbjct: 124 ADALLTKRCRITGGTRDIPRGLLVLNGADYMVAAKVEEYQSLIRRKLGQ----RLEYCGG 179
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN--------QISFQNTIFLFLSNSGGTEIM 174
+ +FDE+ K G LD + + H + +FL +S+ G +
Sbjct: 180 NVVVLFDELQKAAPGTLDALAEAMSEHPRVTFERGGQNVSVDSSRVVFLLVSDVGAEGVN 239
Query: 175 NTFLELRK 182
L RK
Sbjct: 240 AAVLRYRK 247
>gi|381336610|ref|YP_005174385.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356644576|gb|AET30419.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 632
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F + + ++ QLT + V A+
Sbjct: 342 TAKQLALNLFGNKQN-----FIRFDMSEFKFAGTS-LERFKDQLT----TRVRHTPYAVL 391
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 444
>gi|116618213|ref|YP_818584.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097060|gb|ABJ62211.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 632
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 9 QSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
Q+++ R+L +LK V GQ+ A+ + L N +K + G G GK
Sbjct: 282 QTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKPESFLFMGPTGVGKTE 341
Query: 67 VTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ ++F ++ F+ S F + + ++ QLT + V A+
Sbjct: 342 TAKQLALNLFGNKQN-----FIRFDMSEFKFAGTS-LERFKDQLT----TRVRHTPYAVL 391
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ DE++K ++D+++ +D + ++ I+F++ I + +NSG T +MN
Sbjct: 392 LLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMN 444
>gi|373489018|ref|ZP_09579681.1| ATPase AAA-2 domain protein [Holophaga foetida DSM 6591]
gi|372004494|gb|EHP05133.1| ATPase AAA-2 domain protein [Holophaga foetida DSM 6591]
Length = 816
Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+ N+ +E +L + V GQE A+S + A++ + + + L G G GK +
Sbjct: 494 EKQNLVQMETRLNERVIGQEPAVSAVSRAVRRARTGLKNPNRPMGSFLFLGPTGVGKTEL 553
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVS--------LYRLQLTNWIISNVT 119
+ + +F G + +H+F+ F ++ VS + + V
Sbjct: 554 AKTLATFLF------GDPKKMHRFDMS-EFMEKHEVSKLLGAPPGYVGYEEGGLLTDRVR 606
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIM 174
+ +FDEV+K L+++++ D A NQ+ F+NTI + SN G E++
Sbjct: 607 RNPYCVLLFDEVEKAHPDLINILLQIFDDGIATDAFGNQVDFKNTIIIMTSNVGSRELL 665
>gi|403223616|dbj|BAM41746.1| endopeptidase ATP-binding subunit [Theileria orientalis strain
Shintoku]
Length = 895
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 71
+R +E+ + + V GQ+ A+ ++C A++ N + + + L G PG GK+ V +
Sbjct: 550 IRHMEDDIHKMVIGQDEAVKNVCKAIRRAKTNIKNPHRPIGSFLFCGPPGVGKSEVARSL 609
Query: 72 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + D + H + + P QLT + +N ++ +
Sbjct: 610 TKYLFAKENLIRIDMSEYKEPHSISRILGSPPGYKGHDTGGQLTEKVKNN----PYSVVM 665
Query: 128 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNT 176
FDE++K +L++++ ++ A +SF+NTI + SN+G I +
Sbjct: 666 FDEIEKAHHDVLNILLQILEDGKLTDAKNQTVSFKNTIIIMTSNTGSNVIQRS 718
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L Q V GQ+ AIS I A+ +N R H + G G GK + + +
Sbjct: 505 LEKELHQRVIGQDEAISAISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNILLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|282860238|ref|ZP_06269309.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|424899253|ref|ZP_18322799.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
gi|282586971|gb|EFB92205.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|388593467|gb|EIM33705.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
Length = 863
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
+ +QS ++L E++L Q V GQE AI+ + A++ K +A + G GT
Sbjct: 549 RMMQSEREKLLHLEDELHQRVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGT 608
Query: 63 GKNYVTDFIVSSIFK---RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISN 117
GK + + +F S + KF+ SR+ +V QLT
Sbjct: 609 GKTELAKALADYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLT----EA 664
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
V ++ +FDE++K + ++++ +D + + ++F+NTI + SN G I
Sbjct: 665 VRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYI 724
Query: 174 MNTFLELRKSECIEFI 189
F ELR+ E I
Sbjct: 725 QQQFQELREDNREEVI 740
>gi|56789242|gb|AAH88368.1| TOR3A protein [Homo sapiens]
gi|194389662|dbj|BAG61792.1| unnamed protein product [Homo sapiens]
gi|221040240|dbj|BAH14901.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLE 179
C + +FIFDE +K GLL+V+ P ++ A + TIFLFLSN G I L+
Sbjct: 11 CHQTLFIFDEAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLK 70
Query: 180 LRKS 183
L K+
Sbjct: 71 LLKA 74
>gi|418196866|ref|ZP_12833336.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
gi|353858026|gb|EHE37987.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
Length = 327
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 64 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 123
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 124 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 177
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 178 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 229
>gi|373849359|ref|ZP_09592160.1| ATPase AAA-2 domain protein [Opitutaceae bacterium TAV5]
gi|372475524|gb|EHP35533.1| ATPase AAA-2 domain protein [Opitutaceae bacterium TAV5]
Length = 302
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 34/200 (17%)
Query: 18 EQLKQHVHGQELAISHICGALKN---HFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
E L++H+ GQ+ I IC L+ N Y +L ++ G G GK +T+ +
Sbjct: 17 EHLREHIRGQDHVIDPICSVLRRGELGLANPYRPRASLLLA--GPTGVGKTELTNVFTTY 74
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQL------------TNWIISNVTACD 122
+F + G I F +S Y+LQ T + + +
Sbjct: 75 LFPSPDNPG-----EPAAKPIRF----DMSEYQLQSSVDKLIGGAPDETGLLGRALHSLQ 125
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTI----FLFLSNSGGTEIMN--- 175
R +FDE++K +LD+ + +D ++ + ++ +F SN G +E M
Sbjct: 126 RGTLLFDEIEKAHPLVLDLFLQILDDASITLATGERKSLSAFYVVFTSNIGASETMRMQS 185
Query: 176 -TFLELRKSECIEFIFQCQP 194
F +R++ Q +P
Sbjct: 186 APFASIRRTVLARVGQQLRP 205
>gi|406998439|gb|EKE16371.1| ATPase AAA-2 protein [uncultured bacterium]
Length = 833
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE+ L Q + GQE A++ I AL+ ++ K + L G G GK +
Sbjct: 547 LEKNLHQQIIGQEEAVNQIAEALRRTRSGISNSKKPVGSFLFLGPTGVGKTETAKALAKI 606
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
F G + +F+ S P+ + + +L + + V ++ + DE+
Sbjct: 607 YF------GDEEKMIRFDMSEFQTPSSIDRLIGSSQLNQPGRLATQVKDNPYSLILLDEI 660
Query: 132 DKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSECIE 187
+K +LD+ + +D V + +I+F+NTI + SN+G I N E+ K E
Sbjct: 661 EKAYPEILDIFLQILDEGYVTDAFGEKINFRNTIIIATSNAGAALIKN---EVEKGMAPE 717
Query: 188 FI 189
I
Sbjct: 718 LI 719
>gi|17987099|ref|NP_539733.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
melitensis bv. 1 str. 16M]
gi|23502047|ref|NP_698174.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
1330]
gi|62290082|ref|YP_221875.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. 9-941]
gi|82700007|ref|YP_414581.1| chaperonin ClpA/B [Brucella melitensis biovar Abortus 2308]
gi|161619120|ref|YP_001593007.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
ATCC 23365]
gi|189024320|ref|YP_001935088.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus S19]
gi|225627637|ref|ZP_03785674.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella ceti
str. Cudo]
gi|225852666|ref|YP_002732899.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
melitensis ATCC 23457]
gi|237815588|ref|ZP_04594585.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus str. 2308 A]
gi|256263840|ref|ZP_05466372.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 2 str. 63/9]
gi|260546632|ref|ZP_05822371.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus NCTC 8038]
gi|260565576|ref|ZP_05836060.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 1 str. 16M]
gi|260566298|ref|ZP_05836768.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
bv. 4 str. 40]
gi|260754910|ref|ZP_05867258.1| ATP-dependent Clp protease [Brucella abortus bv. 6 str. 870]
gi|260758127|ref|ZP_05870475.1| ATP-dependent Clp protease [Brucella abortus bv. 4 str. 292]
gi|260761953|ref|ZP_05874296.1| ATP-dependent Clp protease [Brucella abortus bv. 2 str. 86/8/59]
gi|260883922|ref|ZP_05895536.1| ATP-dependent Clp protease [Brucella abortus bv. 9 str. C68]
gi|261214162|ref|ZP_05928443.1| ATP-dependent Clp protease [Brucella abortus bv. 3 str. Tulya]
gi|261222335|ref|ZP_05936616.1| ATP-dependent Clp protease [Brucella ceti B1/94]
gi|261314111|ref|ZP_05953308.1| ATP-dependent Clp protease [Brucella pinnipedialis M163/99/10]
gi|261317802|ref|ZP_05956999.1| ATP-dependent Clp protease [Brucella pinnipedialis B2/94]
gi|261758358|ref|ZP_06002067.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella sp.
F5/99]
gi|265988833|ref|ZP_06101390.1| ATP-dependent Clp protease [Brucella pinnipedialis M292/94/1]
gi|265991248|ref|ZP_06103805.1| ATP-dependent Clp protease [Brucella melitensis bv. 1 str. Rev.1]
gi|265995084|ref|ZP_06107641.1| ATP-dependent Clp protease [Brucella melitensis bv. 3 str. Ether]
gi|265998299|ref|ZP_06110856.1| ATP-dependent Clp protease [Brucella ceti M490/95/1]
gi|297248479|ref|ZP_06932197.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 5 str. B3196]
gi|340790786|ref|YP_004756251.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
pinnipedialis B2/94]
gi|376273103|ref|YP_005151681.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus A13334]
gi|376276222|ref|YP_005116661.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
HSK A52141]
gi|376280841|ref|YP_005154847.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
VBI22]
gi|384211534|ref|YP_005600616.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis M5-90]
gi|384224835|ref|YP_005615999.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|384408640|ref|YP_005597261.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis M28]
gi|384445225|ref|YP_005603944.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis NI]
gi|423166732|ref|ZP_17153435.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI435a]
gi|423170894|ref|ZP_17157569.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI474]
gi|423173024|ref|ZP_17159695.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI486]
gi|423178283|ref|ZP_17164927.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI488]
gi|423180324|ref|ZP_17166965.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI010]
gi|423183456|ref|ZP_17170093.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI016]
gi|423185604|ref|ZP_17172218.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI021]
gi|423188739|ref|ZP_17175349.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI259]
gi|9542862|emb|CAC00480.1| ClpA protein [Brucella suis]
gi|17982760|gb|AAL51997.1| ATP-dependent clp protease ATP-binding subunit clpa [Brucella
melitensis bv. 1 str. 16M]
gi|23348002|gb|AAN30089.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|62196214|gb|AAX74514.1| ClpA, ATP-dependent Clp protease, ATP-binding subunit ClpA
[Brucella abortus bv. 1 str. 9-941]
gi|82616108|emb|CAJ11147.1| Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):AAA
ATPase:AAA ATPase, central region:Clp, N terminal
[Brucella melitensis biovar Abortus 2308]
gi|161335931|gb|ABX62236.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
ATCC 23365]
gi|189019892|gb|ACD72614.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus S19]
gi|225617642|gb|EEH14687.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella ceti
str. Cudo]
gi|225641031|gb|ACO00945.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis ATCC 23457]
gi|237788886|gb|EEP63097.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus str. 2308 A]
gi|260095682|gb|EEW79559.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
abortus NCTC 8038]
gi|260151644|gb|EEW86738.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 1 str. 16M]
gi|260155816|gb|EEW90896.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella suis
bv. 4 str. 40]
gi|260668445|gb|EEX55385.1| ATP-dependent Clp protease [Brucella abortus bv. 4 str. 292]
gi|260672385|gb|EEX59206.1| ATP-dependent Clp protease [Brucella abortus bv. 2 str. 86/8/59]
gi|260675018|gb|EEX61839.1| ATP-dependent Clp protease [Brucella abortus bv. 6 str. 870]
gi|260873450|gb|EEX80519.1| ATP-dependent Clp protease [Brucella abortus bv. 9 str. C68]
gi|260915769|gb|EEX82630.1| ATP-dependent Clp protease [Brucella abortus bv. 3 str. Tulya]
gi|260920919|gb|EEX87572.1| ATP-dependent Clp protease [Brucella ceti B1/94]
gi|261297025|gb|EEY00522.1| ATP-dependent Clp protease [Brucella pinnipedialis B2/94]
gi|261303137|gb|EEY06634.1| ATP-dependent Clp protease [Brucella pinnipedialis M163/99/10]
gi|261738342|gb|EEY26338.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella sp.
F5/99]
gi|262552767|gb|EEZ08757.1| ATP-dependent Clp protease [Brucella ceti M490/95/1]
gi|262766197|gb|EEZ11986.1| ATP-dependent Clp protease [Brucella melitensis bv. 3 str. Ether]
gi|263002032|gb|EEZ14607.1| ATP-dependent Clp protease [Brucella melitensis bv. 1 str. Rev.1]
gi|263093971|gb|EEZ17905.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis bv. 2 str. 63/9]
gi|264661030|gb|EEZ31291.1| ATP-dependent Clp protease [Brucella pinnipedialis M292/94/1]
gi|297175648|gb|EFH34995.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 5 str. B3196]
gi|326409187|gb|ADZ66252.1| ATP-dependent CLP protease ATP-binding subunit CLPA [Brucella
melitensis M28]
gi|326538897|gb|ADZ87112.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis M5-90]
gi|340559245|gb|AEK54483.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
pinnipedialis B2/94]
gi|343383015|gb|AEM18507.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
1330]
gi|349743216|gb|AEQ08759.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
melitensis NI]
gi|358258440|gb|AEU06175.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella suis
VBI22]
gi|363400709|gb|AEW17679.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
abortus A13334]
gi|363404789|gb|AEW15084.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella canis
HSK A52141]
gi|374539472|gb|EHR10976.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI474]
gi|374542963|gb|EHR14447.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI435a]
gi|374543579|gb|EHR15061.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI486]
gi|374545522|gb|EHR16983.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI488]
gi|374548888|gb|EHR20335.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI010]
gi|374549519|gb|EHR20962.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI016]
gi|374558397|gb|EHR29790.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI259]
gi|374559695|gb|EHR31080.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella
abortus bv. 1 str. NI021]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|306841892|ref|ZP_07474572.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
BO2]
gi|306288022|gb|EFM59424.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
BO2]
Length = 779
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 419 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 478
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 479 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 535
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 536 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 579
>gi|306844033|ref|ZP_07476628.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
inopinata BO1]
gi|306275788|gb|EFM57512.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella
inopinata BO1]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|261325258|ref|ZP_05964455.1| ATP-dependent Clp protease [Brucella neotomae 5K33]
gi|261301238|gb|EEY04735.1| ATP-dependent Clp protease [Brucella neotomae 5K33]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|256369594|ref|YP_003107104.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
microti CCM 4915]
gi|255999756|gb|ACU48155.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Brucella
microti CCM 4915]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|265984226|ref|ZP_06096961.1| ATP-dependent Clp protease [Brucella sp. 83/13]
gi|306837980|ref|ZP_07470838.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
NF 2653]
gi|264662818|gb|EEZ33079.1| ATP-dependent Clp protease [Brucella sp. 83/13]
gi|306406904|gb|EFM63125.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella sp.
NF 2653]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|261219516|ref|ZP_05933797.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261322011|ref|ZP_05961208.1| ATP-dependent Clp protease [Brucella ceti M644/93/1]
gi|260924605|gb|EEX91173.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261294701|gb|EEX98197.1| ATP-dependent Clp protease [Brucella ceti M644/93/1]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|261752475|ref|ZP_05996184.1| ATP-dependent Clp protease [Brucella suis bv. 5 str. 513]
gi|261742228|gb|EEY30154.1| ATP-dependent Clp protease [Brucella suis bv. 5 str. 513]
Length = 651
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|163843433|ref|YP_001627837.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella suis
ATCC 23445]
gi|163674156|gb|ABY38267.1| ATP-dependent Clp protease ATP-binding subunit clpA [Brucella suis
ATCC 23445]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|148559573|ref|YP_001259087.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella ovis
ATCC 25840]
gi|148370830|gb|ABQ60809.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella ovis
ATCC 25840]
Length = 824
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|332653965|ref|ZP_08419709.1| Clp protease, ATP-binding subunit ClpC [Ruminococcaceae bacterium
D16]
gi|332517051|gb|EGJ46656.1| Clp protease, ATP-binding subunit ClpC [Ruminococcaceae bacterium
D16]
Length = 768
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LEE+LK+H+ GQ+ A+ + A++ K ++ G G GK + + +
Sbjct: 471 LEERLKKHIIGQDEAVKAVVAAIRRGRVGISPKHKPVSFIFVGSTGVGKTELVKQLAQDL 530
Query: 76 FKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 130
F + S F+ K+ SRI +V QLT I ++ +FDE
Sbjct: 531 FHAPESLIRLDMSEFMEKYAVSRIIGSPPGYVGYDEAGQLTEKIRRK----PYSVVLFDE 586
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
++K +L++++ +D + + +++F+NT+ + SN+G
Sbjct: 587 IEKAHPDVLNILLQILDDGHITDAHGRKVNFENTVIIMTSNAG 629
>gi|358341276|dbj|GAA48992.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Clonorchis
sinensis]
Length = 489
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 14/178 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +L++ + GQE AI + A++ Y L G G GK + I + +
Sbjct: 128 LESRLRKALVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQIAAYL 187
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K K D + H+ + I P QLT ++AC A+ +FD
Sbjct: 188 HKDVKKGFIRIDMSEYQQKHEVSKFIGSPPGYIGHEQGGQLTQ----ALSACPNAVVLFD 243
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K +L ++ D + + I ++ IF+ SN G I LR++
Sbjct: 244 ETEKAHPDVLTALLQLFDEGRLTDGRGHTIDCKDAIFIMTSNVGSQVIAEHAQALRQA 301
>gi|257460420|ref|ZP_05625521.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
gracilis RM3268]
gi|257441751|gb|EEV16893.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
gracilis RM3268]
Length = 793
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFI 71
++ LE +K+ + GQ+ A+S +C AL + + + + L G G GK+ + +
Sbjct: 481 LKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGASSPIGVFLFAGSSGVGKSELAKVL 540
Query: 72 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
+ + F+RY D H + I P + + +N+ ++ +F
Sbjct: 541 AAQLGVHFERY-DMSEYMEAHSVSRLIGAP----PGYVGFENGGILTNNIKKHPYSVILF 595
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTE 172
DEV+K + ++ + D+ ++ + F+NTI + SN G E
Sbjct: 596 DEVEKAHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIIIMSSNLGTKE 643
>gi|88607130|ref|YP_505053.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Anaplasma
phagocytophilum HZ]
gi|88598193|gb|ABD43663.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Anaplasma
phagocytophilum HZ]
Length = 773
Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
VR LE+ LK+ + GQ+ AI+H+ A++ + K LA L P G GK +
Sbjct: 463 VRDLEDNLKKVIFGQDEAITHVVDAIRIAKAGMRSSQKPLACYLFAGPTGVGKTELVRQF 522
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S +V SR+ +V + L + ++ ++ + DE
Sbjct: 523 AKCMGMKLIRFDMSEYVESHTVSRMIGSPPGYVGYEQGGL---LTDAISRNQYSVLLLDE 579
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K L ++++ +D+ + + ++SF+N + + +N+G E+
Sbjct: 580 IEKAHSSLYNILLQIMDYGYITDTYGKKVSFRNVVIILTTNAGAMEL 626
>gi|73667083|ref|YP_303099.1| ATP-dependent Clp protease [Ehrlichia canis str. Jake]
gi|72394224|gb|AAZ68501.1| ATP-dependent clp protease [Ehrlichia canis str. Jake]
Length = 759
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
VR LE LKQ + GQ+ AISH+ ++K ++ K LA L P G GK + +
Sbjct: 455 VRNLESNLKQSIFGQDFAISHLVDSIKIAKAGLRNHNKPLASYLFAGPTGVGKTELAKQL 514
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + S ++ H + I P +V + L + +++ ++ + D
Sbjct: 515 AEHMGMKLIRFDMSEYMEPHAISKIIGSP-PGYVGYDQGGL---LTDSISRHQYSVLLLD 570
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
E++K + ++++ +D+ V + +++F N + + +N+G E+
Sbjct: 571 EIEKAHNDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFEL 618
>gi|417938004|ref|ZP_12581303.1| ATPase, AAA family [Streptococcus infantis SK970]
gi|343391645|gb|EGV04219.1| ATPase, AAA family [Streptococcus infantis SK970]
Length = 485
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 247 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 306
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 307 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 360
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
FDEV+K + +V++ +D + + ++ F NTI + SN G T + +
Sbjct: 361 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRD 412
>gi|435856135|ref|YP_007316987.1| clp protease ATP binding subunit (chloroplast) [Nannochloropsis
gaditana]
gi|429126059|gb|AFZ64230.1| clp protease ATP binding subunit (chloroplast) [Nannochloropsis
gaditana]
Length = 449
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE+ L H+ GQE A++ + +L+ + + + + + L G G GK +T + +
Sbjct: 113 LEQDLGNHIIGQERALAVVAKSLRRYAAGLRNPKRPIGSFLLCGPTGVGKTELTKQLAEN 172
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+F K S ++ K +R+ +V QLT+ + S C I +FD
Sbjct: 173 LFGSQKALIRLDMSEYMEKHTVARLIGSPPGYVGFEEGGQLTDAVRSR-PYC---IVLFD 228
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 174
E++K + +V++ +D + + +SFQNT+ + SN G I+
Sbjct: 229 EIEKAHPDVYNVLLQILDDGILSDSTGRTVSFQNTLIMLTSNLGSQTIL 277
>gi|257064193|ref|YP_003143865.1| ATPase [Slackia heliotrinireducens DSM 20476]
gi|256791846|gb|ACV22516.1| ATPase family protein associated with various cellular activities
(AAA) [Slackia heliotrinireducens DSM 20476]
Length = 632
Score = 43.5 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 17 EEQLKQHVHGQELAISHICGALKNH---FQNRYHNTKAL---AISLHGLPGTGKNYVTDF 70
EE+L++ V GQ+ A+S I LK F H++ + + L G GTGK V
Sbjct: 309 EEKLRRRVKGQDRALSKIVTVLKRSVMGFSGMQHSSGSKPKGVLFLAGPTGTGKTEVVKA 368
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL-----------QLTNWIISNVT 119
+ +F G R +F+ + + L+ QLTN + +N
Sbjct: 369 VTELLF------GDERSYLRFDMSEYASENSDQKLFGAPPGYVGYEEGGQLTNAVKAN-- 420
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 172
++ +FDEV+K ++D + ++ + N + F T+ F SN G +E
Sbjct: 421 --PFSVLLFDEVEKAHPSIMDKFLQILEDGRMTDGQGNTVYFSETLIFFTSNVGISE 475
>gi|392403803|ref|YP_006440415.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Turneriella
parva DSM 21527]
gi|390611757|gb|AFM12909.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Turneriella
parva DSM 21527]
Length = 771
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYV 67
+ + ++ + E LK ++GQ+ A+ I A+K H + K + L P GTGK +
Sbjct: 444 EGAGLKSIAENLKARIYGQDAAVEKIARAIKRHRAGLGNKQKPIGSFLFTGPTGTGKTEL 503
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAI 125
T I + S ++ K + SR+ +V + QLT+ I + R++
Sbjct: 504 TRAIAGELGVELIRFDMSEYMEKHSISRLLGSPPGYVGFDQGAQLTDAIRKH----PRSV 559
Query: 126 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ DE++K + ++ +D+ V + + F++ + + SN+G E+
Sbjct: 560 LLLDEIEKAHPDIFSTLLQVMDYATVTDATGKKADFRHVLLVMTSNAGSGEL 611
>gi|418619819|ref|ZP_13182631.1| ATPase, AAA family [Staphylococcus hominis VCU122]
gi|374823817|gb|EHR87809.1| ATPase, AAA family [Staphylococcus hominis VCU122]
Length = 881
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
L++ +K + GQ+ AI I A ++ + N L G G GK + +
Sbjct: 576 LKDTMKSQIIGQDEAIETIANAVIRKKLGFKQSNRPVGVFMLLGTTGVGKTETAKILNKT 635
Query: 75 IFK------RYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
+++ RY D + H+ S++ P ++ + ++ V RA+ +F
Sbjct: 636 LYRDEQNIIRY-DMSEYQKEHEV-SKLIGPPPGYIGFGQ---DGDLVKTVLEHPRAVILF 690
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMN 175
DE++K + DV++ D + N + F +I L SN G ++I N
Sbjct: 691 DEIEKAHPKIFDVLLQVFDDGRLTNSLGETADFSESIILLTSNIGASDIQN 741
>gi|118357902|ref|XP_001012199.1| ATP-dependent protease La [Tetrahymena thermophila]
gi|89293966|gb|EAR91954.1| ATP-dependent protease La [Tetrahymena thermophila SB210]
Length = 1117
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 42/186 (22%)
Query: 20 LKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 78
L ++G E I + N +N + +K + L G PGTGK +
Sbjct: 509 LDDEIYGLEKVKERIIEMIAVNQMKNTHSKSKGFILLLQGPPGTGKTSIA---------- 558
Query: 79 YKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV---------TACDRAIFIFD 129
K ++ + K N I F + S ++ ++ S +FI D
Sbjct: 559 ---KAVAKALQKENRFISFAGISDPSFFKGHRRTYVDSQPGVFIKELIKAQTMNPVFILD 615
Query: 130 EVDKFPK---------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
E+DK K L++++ P F DH+ ++ F NTIF+ +N+ IMN
Sbjct: 616 EIDKISKSSMGADPYYSLMEILNPEENNNFTDHYMDI-KVDFSNTIFILTANN----IMN 670
Query: 176 TFLELR 181
L+
Sbjct: 671 MLEPLK 676
>gi|262283594|ref|ZP_06061359.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
gi|262260651|gb|EEY79352.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
Length = 809
Score = 43.1 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LEE+L + V GQ+ AIS I A++ + N + + + G G GK + + +
Sbjct: 505 LEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFVASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|157150882|ref|YP_001451248.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
gi|157075676|gb|ABV10359.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
Length = 809
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LEE+L + V GQ+ AIS I A++ + N + + + G G GK + + +
Sbjct: 505 LEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKALAET 564
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + +I F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSL 668
>gi|386338816|ref|YP_006034985.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334281452|dbj|BAK29026.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 610
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
L E+LK+ V GQ+ AIS I A+ K ++ L G G GK ++ + +
Sbjct: 289 LTEKLKRRVKGQDEAISAIVDAITIAQAGLQDENKPISSFLFLGPTGVGKTELSKAVAEA 348
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTN---WIISNVTACDRAIFIFDEV 131
+F D T+ +F+ + E+ V + T + +V ++ + DEV
Sbjct: 349 LF----DDETAMI--RFDMSEYKQKEDVVKFIGDRATRTKGQLTESVKQKPYSVLLLDEV 402
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN------TFLELR 181
+K ++D+ + +D + + ISF+NTI + +N G +I+N F L
Sbjct: 403 EKAHSEVMDIFLQVLDDGRLTDSTGRVISFKNTIVIMTTNIGAQKIINKAELKGNFKTLS 462
Query: 182 KSECIEF 188
+ E ++F
Sbjct: 463 ERERLQF 469
>gi|294852508|ref|ZP_06793181.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella sp.
NVSL 07-0026]
gi|294821097|gb|EFG38096.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brucella sp.
NVSL 07-0026]
Length = 824
Score = 42.7 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LEAELKRVVYGQDLAIDALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMESHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH A+ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|307194953|gb|EFN77059.1| Torsin-like protein [Harpegnathos saltator]
gi|307202047|gb|EFN81595.1| Torsin-like protein [Harpegnathos saltator]
Length = 174
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Query: 134 FPKGLLDVIIPFIDHHAV-----YNQISFQN-TIFLFLSNSGGTEIMNTFLEL 180
P+GLL+V++PF+D+H+ Y++ QN IF+FLSN+G +I+ L
Sbjct: 1 MPEGLLNVLVPFLDYHSYRKSSKYSESIHQNKAIFIFLSNTGSAQIVRHLFSL 53
>gi|160871902|ref|ZP_02062034.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rickettsiella
grylli]
gi|159120701|gb|EDP46039.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rickettsiella
grylli]
Length = 770
Score = 42.7 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
S +R LE +LK V GQ+ AI ++C A+K K + L P G GK VT
Sbjct: 450 SRLRHLETKLKARVFGQDKAIKNLCAAMKLTRSGLRETNKTIGSFLFAGPTGVGKTEVTR 509
Query: 70 FIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
+ + S ++ + + SR+ ++ + L + VT A+ +
Sbjct: 510 QLAELMGIELLRFDMSEYMERHSVSRLIGAPPGYIGYDQGGL---LTEAVTKHPHAVLLL 566
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
DE++K + ++++ +DH ++ + + F + I + SN+G ++
Sbjct: 567 DEIEKAHPDIFNLLLQVMDHGSLTDTNGRKTDFSHIILVMTSNAGAEQL 615
>gi|282601158|ref|ZP_05980957.2| negative regulator of genetic competence ClpC/MecB [Subdoligranulum
variabile DSM 15176]
gi|282570064|gb|EFB75599.1| ATPase family associated with various cellular activities (AAA)
[Subdoligranulum variabile DSM 15176]
Length = 750
Score = 42.4 bits (98), Expect = 0.096, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LEE LK H+ GQ+ A+ + GA+K + + + G G GK + + + +
Sbjct: 454 LEEALKAHIIGQDEAVHAVAGAIKRARADLSGRHRPASFIFVGPTGVGKTELVKQLANQL 513
Query: 76 FKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 130
F S ++ K+ SR+ +V QLT V ++ +FDE
Sbjct: 514 FDTVDPLISIDMSEYMEKYAVSRLIGSPPGYVGYDEAGQLT----EKVRRHPYSVVLFDE 569
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++K ++++++ +D + + + F NT+ SN+G T+
Sbjct: 570 IEKAHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSTD 615
>gi|167519455|ref|XP_001744067.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777153|gb|EDQ90770.1| predicted protein [Monosiga brevicollis MX1]
Length = 486
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 23/188 (12%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 74
LE++L +++ GQ+ I + A++ +N +HN L G G GK + I
Sbjct: 165 LEDRLHRYIVGQDGPIMSVAAAIRRK-ENGWHNEDHPLVFLFLGSSGVGKTELAKRIAQY 223
Query: 75 IFKRYKDKGTSRFVHKFNSRI-----HFPNENHVSL-------YRLQLTNWIISN-VTAC 121
I D + R F + F ++ VS Y +++N ++ C
Sbjct: 224 I----HDDESPRVPASFEGFVRLDMSEFQEKHEVSKLIGSPAGYVGHEDGGVLTNALSKC 279
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 177
A+ +FDEV+K +L V++ D + + + ++ +F+ SN I
Sbjct: 280 KNAVVLFDEVEKAHPDVLTVLLQLFDEGRITDGRGQTVECKDAVFIMTSNLASDVIAQHA 339
Query: 178 LELRKSEC 185
ELR++ C
Sbjct: 340 WELRQATC 347
>gi|52841054|ref|YP_094853.1| ATP-binding protease component ClpA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628165|gb|AAU26906.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 757
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 454 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 513
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 514 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 570
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 571 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 618
>gi|54296839|ref|YP_123208.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Paris]
gi|397663378|ref|YP_006504916.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|397666495|ref|YP_006508032.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|53750624|emb|CAH12031.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Paris]
gi|395126789|emb|CCD04972.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
gi|395129906|emb|CCD08139.1| ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine
protease, chaperone activity [Legionella pneumophila
subsp. pneumophila]
Length = 755
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 616
>gi|378776767|ref|YP_005185204.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507581|gb|AEW51105.1| ATP binding protease component ClpA [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 757
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 454 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 513
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 514 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 570
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 571 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 618
>gi|148360535|ref|YP_001251742.1| ATP binding protease component ClpA [Legionella pneumophila str.
Corby]
gi|296106399|ref|YP_003618099.1| ATP binding protease component [Legionella pneumophila 2300/99
Alcoy]
gi|148282308|gb|ABQ56396.1| ATP binding protease component ClpA [Legionella pneumophila str.
Corby]
gi|295648300|gb|ADG24147.1| ATP binding protease component [Legionella pneumophila 2300/99
Alcoy]
gi|307609612|emb|CBW99114.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila 130b]
Length = 755
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +EI+
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASEIV 616
>gi|114704885|ref|ZP_01437793.1| endopeptidase Clp ATP-binding chain A [Fulvimarina pelagi HTCC2506]
gi|114539670|gb|EAU42790.1| endopeptidase Clp ATP-binding chain A [Fulvimarina pelagi HTCC2506]
Length = 832
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ QLK+ V+GQ+ AI + A+K K + L P G GK V + S+
Sbjct: 462 LDTQLKRVVYGQDQAIEALASAIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLAST 521
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 LGVEILRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 578
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + QI F+N I + +N+G +E+
Sbjct: 579 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASEM 622
>gi|297570431|ref|YP_003691775.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurivibrio alkaliphilus AHT2]
gi|296926346|gb|ADH87156.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurivibrio alkaliphilus AHT2]
Length = 764
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFI 71
+R+LE LK + GQ+ AIS + GA+K + A G G GK + +
Sbjct: 466 LRLLETMLKSQIFGQDQAISALTGAVKRSRAGIKRPEGPTGAFLFAGPTGVGKTELARQL 525
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ ++ S ++ K SR+ +V + L + + ++ +FDE
Sbjct: 526 AANLSIHFERFDMSEYMEKHAVSRLIGSPPGYVGFDQGGL---LTEAIRKHPHSVLLFDE 582
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K + +++ +DH ++ + + F+N I + +N+G E+
Sbjct: 583 LEKAHPDIFSILLQVMDHASLTDNSGRKADFRNVILIMTTNAGAREL 629
>gi|145517578|ref|XP_001444672.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412094|emb|CAK77275.1| unnamed protein product [Paramecium tetraurelia]
Length = 752
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 420 DIQYAKDVLNKEIEGLEKVKERIIEMISVNKLKNSGQKAKGFILLLNGPPGTGKTSIAKS 479
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 126
I ++ K TSRF+ + + P + H Y + I + + +F
Sbjct: 480 IAKAL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 531
Query: 127 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSN 167
I DE+DK K LL+++ P F DH+ + + F N IF+ SN
Sbjct: 532 ILDELDKVSKHHAGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSNVIFILTSN 586
>gi|421766452|ref|ZP_16203226.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
garvieae DCC43]
gi|407625220|gb|EKF51935.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
garvieae DCC43]
Length = 816
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
+S + LE++L + V GQE AIS + A++ + + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADSRRPLGSFMFLGPTGVGKTEL 563
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
+ S+F + S ++ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEESMIRVDMSEYMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ +FDEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILFDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|360042934|emb|CCD78344.1| putative suppressor of potassium transport defect 3 (skd3 protein)
[Schistosoma mansoni]
Length = 506
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 14/191 (7%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E K + ++ LE +L++ + GQE AI + A++ Y L G
Sbjct: 148 EEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGSS 207
Query: 61 GTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI 114
G GK + + + + K K D + H+ + I P QLT
Sbjct: 208 GIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTR-- 265
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 170
+ AC A+ +FDE +K +L ++ D + + I+ ++ IF+ SN G
Sbjct: 266 --ALAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGTTINCKDAIFIMTSNVGS 323
Query: 171 TEIMNTFLELR 181
I +LR
Sbjct: 324 QVIAEHAQQLR 334
>gi|256078931|ref|XP_002575746.1| suppressor of potassium transport defect 3 (skd3 protein)
[Schistosoma mansoni]
Length = 506
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 14/191 (7%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E K + ++ LE +L++ + GQE AI + A++ Y L G
Sbjct: 148 EEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGSS 207
Query: 61 GTGKNYVTDFIVSSIFKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI 114
G GK + + + + K K D + H+ + I P QLT
Sbjct: 208 GIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTR-- 265
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 170
+ AC A+ +FDE +K +L ++ D + + I+ ++ IF+ SN G
Sbjct: 266 --ALAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGTTINCKDAIFIMTSNVGS 323
Query: 171 TEIMNTFLELR 181
I +LR
Sbjct: 324 QVIAEHAQQLR 334
>gi|146301025|ref|YP_001195616.1| ATPase [Flavobacterium johnsoniae UW101]
gi|146155443|gb|ABQ06297.1| ATPase AAA-2 domain protein [Flavobacterium johnsoniae UW101]
Length = 819
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA----LAISLHGLPGTGKNYVTDFI 71
+EE L + V GQ+ I+ + G++ + R +KA + G GTGK + +
Sbjct: 517 IEEVLNRRVIGQDHCIATVAGSI---LEARSGLSKAGQPIASFFFLGPTGTGKTELAKSL 573
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDR 123
+F+ + RF F E+ +L ++ ++ +
Sbjct: 574 AEFLFQ--DENAIIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPY 626
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS----FQNTIFLFLSNSGGTEIMNTF 177
+I +FDE++K + DV + +D +++++ F N I LF SN G I+NTF
Sbjct: 627 SIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTF 684
>gi|58617205|ref|YP_196404.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ehrlichia
ruminantium str. Gardel]
gi|58416817|emb|CAI27930.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Gardel]
Length = 764
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ LE+ LKQH+ GQ+ AIS + ++K + K LA L P G GK + +
Sbjct: 460 VKNLEKNLKQHIFGQDFAISSLVDSIKIAKAGLRDHRKPLASYLFTGPTGVGKTELAKQL 519
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + + S ++ + S+I +V + L + +++ ++ + DE
Sbjct: 520 ANHMGMKLIRFDMSEYMESHSISKIIGSPPGYVGYDQGGL---LTDSISRHQYSVLLLDE 576
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K + ++++ +D+ V + ++SF N I + +N+G E+
Sbjct: 577 IEKAHSDIYNILLQIMDYGCVTDTYGRKVSFHNVIVILTTNAGAFEL 623
>gi|57239194|ref|YP_180330.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Welgevonden]
gi|58579152|ref|YP_197364.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ehrlichia
ruminantium str. Welgevonden]
gi|57161273|emb|CAH58194.1| ATP-dependent Clp protease, ATP-binding subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417778|emb|CAI26982.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ehrlichia
ruminantium str. Welgevonden]
Length = 764
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ LE+ LKQH+ GQ+ AIS + ++K + K LA L P G GK + +
Sbjct: 460 VKNLEKNLKQHIFGQDFAISSLVDSIKIAKAGLRDHRKPLASYLFTGPTGVGKTELAKQL 519
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + + S ++ + S+I +V + L + +++ ++ + DE
Sbjct: 520 ANHMGMKLIRFDMSEYMESHSISKIIGSPPGYVGYDQGGL---LTDSISRHQYSVLLLDE 576
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K + ++++ +D+ V + ++SF N I + +N+G E+
Sbjct: 577 IEKAHSDIYNILLQIMDYGCVTDTYGRKVSFHNVIVILTTNAGAFEL 623
>gi|443702035|gb|ELU00197.1| hypothetical protein CAPTEDRAFT_151350 [Capitella teleta]
Length = 620
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 14/177 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+++ GQ+ AI+ + A++ Y L G G GK + + +
Sbjct: 267 LELRLKENIIGQDGAITTVASAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVARYL 326
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K K D + H+ I P QLT +T A+ +FD
Sbjct: 327 HKNPKKGFIRIDMSEYQEKHEVAKFIGSPPGYVGHDEGGQLT----KKLTEQPNAVVLFD 382
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
EVDK +L +++ D + + I ++ IF+ SN EI + + LR+
Sbjct: 383 EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNLASEEIADHAISLRR 439
>gi|410500555|ref|YP_006938879.1| hypothetical protein SAP020A_016 [Staphylococcus sp. CDC3]
gi|281334507|gb|ADA61591.1| hypothetical protein SAP020A_016 [Staphylococcus sp. CDC3]
Length = 618
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 1 EACTDKFIQSS---------NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA 51
EA DK I SS N+ +E+ +++ V+GQ+LAI + L T+
Sbjct: 242 EALLDKRIYSSIGIDPKFRVNIDQIEKSMRERVYGQDLAIETLVDNLNVTVAGLSDPTRP 301
Query: 52 LAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT 111
+ G G GK + + ++ G + +++ + E V + +++
Sbjct: 302 SSFMFLGPTGVGKTEIAKAMGEGLY------GDEEVLERYDMS-EYQTEADVEKFIHKIS 354
Query: 112 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 167
+ + + I +FDE++K +G++D+ + +D + N Q++F+N + SN
Sbjct: 355 DAVWNR----PFGIRLFDEIEKAHRGVMDLFLQILDDGRLENRYGRQVNFRNCYIIMTSN 410
Query: 168 SG 169
G
Sbjct: 411 IG 412
>gi|429763453|ref|ZP_19295802.1| putative negative regulator of genetic competence ClpC/MecB
[Anaerostipes hadrus DSM 3319]
gi|429178647|gb|EKY19923.1| putative negative regulator of genetic competence ClpC/MecB
[Anaerostipes hadrus DSM 3319]
Length = 819
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+R LE++L +HV GQ+ A++ + A+K + + N + G G GK ++ +
Sbjct: 507 LRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSKTL 566
Query: 72 VSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 126
++F R +D S ++ K + S+I +V QL+ I + ++
Sbjct: 567 AKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRH----PYSVL 622
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
+FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 623 LFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 674
>gi|317496968|ref|ZP_07955298.1| ATPase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895980|gb|EFV18132.1| ATPase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 696
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+R LE++L +HV GQ+ A++ + A+K + + N + G G GK ++ +
Sbjct: 384 LRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSKTL 443
Query: 72 VSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 126
++F R +D S ++ K + S+I +V QL+ I + ++
Sbjct: 444 AKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRH----PYSVL 499
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
+FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 500 LFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 551
>gi|167766277|ref|ZP_02438330.1| hypothetical protein CLOSS21_00781 [Clostridium sp. SS2/1]
gi|167711996|gb|EDS22575.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. SS2/1]
gi|291559090|emb|CBL37890.1| ATPases with chaperone activity, ATP-binding subunit
[butyrate-producing bacterium SSC/2]
Length = 819
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+R LE++L +HV GQ+ A++ + A+K + + N + G G GK ++ +
Sbjct: 507 LRHLEKELHKHVIGQDEAVNAVAKAVKRSRVGLKSPNRPIGSFLFLGPTGVGKTELSKTL 566
Query: 72 VSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 126
++F R +D S ++ K + S+I +V QL+ I + ++
Sbjct: 567 AKALFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQLSEQIRRH----PYSVL 622
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
+FDE++K + ++++ +D + + ++ F+NT+ + SN+G I+
Sbjct: 623 LFDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVIIMTSNAGANRII 674
>gi|56416863|ref|YP_153937.1| ATP-dependent Clp protease ATP-binding subunit [Anaplasma marginale
str. St. Maries]
gi|222475228|ref|YP_002563644.1| ATP-dependent clp protease ATP-binding subunit ClpA [Anaplasma
marginale str. Florida]
gi|56388095|gb|AAV86682.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma marginale
str. St. Maries]
gi|222419365|gb|ACM49388.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Florida]
Length = 781
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 3 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 60
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 462 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 521
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNV 118
G GK + + ++ + S ++ H I P +V + L + +
Sbjct: 522 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGL---LTDTI 577
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 578 ARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 635
>gi|269958722|ref|YP_003328509.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma centrale
str. Israel]
gi|269848551|gb|ACZ49195.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma centrale
str. Israel]
Length = 781
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 3 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 60
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 462 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 521
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQ-LTNWIISN 117
G GK + + ++ + S ++ H I P +V + LT+ I N
Sbjct: 522 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGLLTDTIARN 580
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 581 ----QYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 635
>gi|90419586|ref|ZP_01227496.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Aurantimonas
manganoxydans SI85-9A1]
gi|90336523|gb|EAS50264.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Aurantimonas
manganoxydans SI85-9A1]
Length = 820
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 6 KFIQSSNVRVLEE---QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 61
K + + VLE QLK+ V+GQ+ AI + A+K K + L P G
Sbjct: 450 KAVSKDDAEVLEHLDAQLKRVVYGQDAAIGSLASAIKLARAGLREPDKPIGSYLFSGPTG 509
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 120
GK V + +++ S ++ + SR+ +V + L + V
Sbjct: 510 VGKTEVARQLAAALGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 566
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ + DEV+K L ++++ +DH + + QI F+N I + +N+G +E+
Sbjct: 567 HPHCVLLLDEVEKAHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASEM 623
>gi|90409457|ref|ZP_01217518.1| negative regulator of genetic competence clpc/mecb, partial
[Psychromonas sp. CNPT3]
gi|90309437|gb|EAS37661.1| negative regulator of genetic competence clpc/mecb [Psychromonas
sp. CNPT3]
Length = 701
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 16 LEEQLKQHVHGQELAISHIC-GALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
+++ L V GQELA+ +C G L + + L ++ G G GK Y+ +
Sbjct: 318 IQQSLNNKVIGQELAVEGLCQGYLTSSIE--AQQGPRLILTFAGPSGVGKTYLASLLQEE 375
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQL------TNWIISNVTACDRAIFIF 128
+ K T + FN + + + L+ + + S V A R I +F
Sbjct: 376 LNNFEK---TGYVFNIFNMENYSDERDGMKLFGTGVQYSGGSAGMLTSEVRAQPRQIILF 432
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYNQ-----ISFQNTIFLFLSNSGGTEIMN 175
DE++K ++ ++ +D V +Q I F I +F +N G + N
Sbjct: 433 DEIEKAHSVVIQSLLSILDSGTVKDQTSQEEIDFSQCIIIFTTNLGQDVLKN 484
>gi|407777623|ref|ZP_11124891.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor pacificus pht-3B]
gi|407300423|gb|EKF19547.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor pacificus pht-3B]
Length = 821
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++LK+ V+GQE AI+ + A+K K + L P G GK V + +S
Sbjct: 466 LEQELKRVVYGQETAITALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + I F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGAADL 626
>gi|304439880|ref|ZP_07399774.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371619|gb|EFM25231.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 819
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 67
+++ +R L+ L++ V GQ+ AI + A+K + N + G G GK Y+
Sbjct: 493 ENTKLRELDNNLRRSVKGQDEAIISLSKAIKRARVGLKDKNRPIGSFIFVGPTGVGKTYL 552
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 122
+ + +F + S ++ K + SR+ +V QLT + SN
Sbjct: 553 SKKLAEEVFGNESNMIRIDMSEYMEKHSVSRLVGSPPGYVGHEEGGQLTEIVRSN----P 608
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
++ +FDE++K + ++++ +D + + +SF++TI + SN+G T + N
Sbjct: 609 YSVILFDEIEKAHPDVFNILLQILDDGILTDSQGRTVSFKDTIIIMTSNAGATLLKN 665
>gi|222530641|ref|YP_002574523.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222457488|gb|ACM61750.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 608
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 17 EEQLKQHVHGQELAISHICGALKNHFQN-------RYHNTKALAISLHGLPGTGKNYVTD 69
EE LK+ V GQE AI L+ F N RY N + G G GK +
Sbjct: 286 EEFLKRRVMGQEKAIKQAATILRRAFFNLSGSQFSRYSNRPKGVLFFAGPTGVGKTELAK 345
Query: 70 FIVSSIFKR---YKDKGTSRFVHK-FNSRIHFPNENHVSLYRL--QLTNWIISNVTACDR 123
I IF Y S F H+ + R+ +V Y + +LTN + N +
Sbjct: 346 AITELIFGSEHHYIRFDMSEFSHEHSDQRLIGAPPGYVG-YDVGGELTNAVKQNPFS--- 401
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ +FDE++K +LD+ + +D + + + F ++ +F SN G E+
Sbjct: 402 -VILFDEIEKAHPKILDIFLQILDDGRLTSGRGETVYFSESLIIFTSNLGVFEV 454
>gi|312623528|ref|YP_004025141.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203995|gb|ADQ47322.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 608
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 17 EEQLKQHVHGQELAISHICGALKNHFQN-------RYHNTKALAISLHGLPGTGKNYVTD 69
EE LK+ V GQE AI L+ F N RY N + G G GK +
Sbjct: 286 EEFLKRRVMGQEKAIKQAATILRRAFFNLSGSQFSRYSNRPKGVLFFAGPTGVGKTELAK 345
Query: 70 FIVSSIFKR---YKDKGTSRFVHK-FNSRIHFPNENHVSLYRL--QLTNWIISNVTACDR 123
I IF Y S F H+ + R+ +V Y + +LTN + N +
Sbjct: 346 AITELIFGSEHHYIRFDMSEFSHEHSDQRLIGAPPGYVG-YDVGGELTNAVKQNPFS--- 401
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ +FDE++K +LD+ + +D + + + F ++ +F SN G E+
Sbjct: 402 -VILFDEIEKAHPKILDIFLQILDDGRLTSGRGETVYFSESLIIFTSNLGVFEV 454
>gi|297171835|gb|ADI22825.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Oceanospirillales bacterium HF0500_29K23]
Length = 735
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
+E+++ + V GQ A+ +C AL+ + + + A + G G GK + + +
Sbjct: 418 MEKEISKIVVGQSSAVETLCKALRRSRADLKDPARPIGAFMMLGPTGVGKTLLAKSLAVN 477
Query: 75 IF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 129
+F K S ++ KFN SR+ +V QLT + N ++ +FD
Sbjct: 478 MFGDSKSLVQLDMSEYMEKFNVSRLVGSPPGYVGYEEGGQLTEKVRRN----PYSVVLFD 533
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
EV+K ++++++ ++ + + Q+ F+NTI L SN G +
Sbjct: 534 EVEKAHPDVMNMLLQILEEGKLTDSFGRQVDFRNTIILLTSNVGAERL 581
>gi|255003210|ref|ZP_05278174.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Puerto Rico]
gi|255004338|ref|ZP_05279139.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Virginia]
Length = 768
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 3 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 60
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 449 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 508
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQ-LTNWIISN 117
G GK + + ++ + S ++ H I P +V + LT+ I N
Sbjct: 509 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGLLTDTIARN 567
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 568 ----QYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 622
>gi|254995051|ref|ZP_05277241.1| ATP-dependent clp protease ATP-binding subunit (clpA) [Anaplasma
marginale str. Mississippi]
Length = 767
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 3 CTDKFIQSSN-VRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLP 60
C + F ++ V+ LEE LKQ + GQ+ AIS I A++ R H + L G
Sbjct: 448 CDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPT 507
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQ-LTNWIISN 117
G GK + + ++ + S ++ H I P +V + LT+ I N
Sbjct: 508 GVGKTELVKQLAKNMGMKLVRFDMSEYMESHTVARMIGSP-PGYVGYEQGGLLTDTIARN 566
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++ + DE++K + ++++ +D+ + + ++SF+N + + +N+G E
Sbjct: 567 ----QYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVE 621
>gi|385261014|ref|ZP_10039147.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
gi|385189600|gb|EIF37062.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
Length = 810
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|309799549|ref|ZP_07693778.1| ClpC [Streptococcus infantis SK1302]
gi|308116825|gb|EFO54272.1| ClpC [Streptococcus infantis SK1302]
Length = 810
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|218675720|gb|AAI69269.2| hypothetical protein LOC54863 [synthetic construct]
Length = 113
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 20 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 78
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPN 99
++V + +D S V ++++R H P
Sbjct: 79 SHVGRLLARHFRSVLED---SALVLQYHARHHCPE 110
>gi|381179965|ref|ZP_09888810.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Treponema
saccharophilum DSM 2985]
gi|380768061|gb|EIC02055.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Treponema
saccharophilum DSM 2985]
Length = 764
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+ +R LE L+ + GQ+ A+S IC A+K TK A L G G GK +
Sbjct: 458 EKERLRDLEGALRSRIFGQDEAVSRICVAVKKARAGFRDETKPEASFLFVGPTGVGKTEL 517
Query: 68 TDFIVSSI--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV 118
+ ++ Y++ T SR + + + N + + V
Sbjct: 518 AKSLGDTLGLPLVRFDMSEYQESYTVSRLIGSAPGYVGYDN-----------GGLLTAAV 566
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+I +FDE++K + + ++++ +D+ + + + F+N I +F SN+G ++
Sbjct: 567 KKSPHSIVLFDEIEKAHQDIYNILLQVLDYGTLTDNQGQKADFRNCIIIFTSNAGARDM 625
>gi|198422963|ref|XP_002129983.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
(Suppressor of potassium transport defect 3) [Ciona
intestinalis]
Length = 644
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 14/176 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+++ GQ+ AI+ + A++ Y L G G GK + + + +
Sbjct: 277 LERRLKENIVGQDGAINCVASAIRRKQNGWYDEDHPLVFLFLGSSGIGKTELAKQVANYL 336
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K K D + H+ I P QLT + A A+ +FD
Sbjct: 337 HKDNKKGFIRLDMSEYQEKHEVAKLIGSPPGYIGHEQGGQLTK----KLKAMPNAVVLFD 392
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
EVDK +L V++ D + + I ++ +F+ SN EI LR
Sbjct: 393 EVDKAHPDVLTVLLQLFDEGRLTDGRGKTIDCKDAVFVMTSNLAADEIAEYGARLR 448
>gi|420143743|ref|ZP_14651240.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856614|gb|EIT67154.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 816
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
+S + LE++L + V GQE AIS + A++ + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGSFMFLGPTGVGKTEL 563
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
+ S+F ++ S F+ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEENMIRVDMSEFMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ + DEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|347520959|ref|YP_004778530.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385832322|ref|YP_005870097.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343179527|dbj|BAK57866.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343181475|dbj|BAK59813.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 816
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
+S + LE++L + V GQE AIS + A++ + L + G G GK +
Sbjct: 504 ESERLINLEKELHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGSFMFLGPTGVGKTEL 563
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
+ S+F ++ S F+ KF+ SR+ +V QLT V
Sbjct: 564 AKALAESVFGSEENMIRVDMSEFMEKFSTSRLIGAPPGYVGYDEGGQLT----EQVRNKP 619
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ + DEV+K + ++++ +D V + ++ F+NTI + SN G T I
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATAI 674
>gi|238551757|gb|ACR44938.1| heat shock protein [Eimeria tenella]
Length = 484
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 14/181 (7%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTD 69
S V L + L V GQ+ A+ + AL K L L G G GK +
Sbjct: 104 SRVLRLADILSLRVVGQDRAVKAVADALAIQRAGLSPKNKPLGTFLFLGSSGVGKTELAK 163
Query: 70 FIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+ +F K D + H + I P + QLT V +
Sbjct: 164 AVAEEMFDSEKNLIRLDMVEYQEAHSISRLIGPPPGYMGNDEGGQLT----EAVRQKPHS 219
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
+ +FDEV+ K L +++P +D + N++ F N + + SN G I++++ E+
Sbjct: 220 VVLFDEVENAHKNLWSLLLPMLDEGHLSDSKGNRVDFTNCLIILTSNIGQQYILDSYKEV 279
Query: 181 R 181
R
Sbjct: 280 R 280
>gi|335042360|ref|ZP_08535387.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
gi|333788974|gb|EGL54856.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
aminisulfidivorans MP]
Length = 754
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT-- 68
N+R LE+ LK+ + GQ+ AIS + A+K H K L P G GK VT
Sbjct: 447 NLRKLEDNLKRVIFGQDEAISALGSAIKMARSGLGHPEKPTGAFLFAGPTGVGKTEVTRQ 506
Query: 69 -------DFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC 121
D I + + + SR + + F LT+ II
Sbjct: 507 LAHNLGVDLIRFDMSEYMESHTVSRLIGAPPGYVGFDQGG-------LLTDAIIKQ---- 555
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
A+ + DE++K + ++++ +DH + + + F++ + + SN+G E+
Sbjct: 556 PHAVLLLDEIEKAHPDVFNLLLQVMDHGTLTDNNGRKADFRHVVLVMTSNAGAAEM 611
>gi|419443598|ref|ZP_13983618.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
gi|379549149|gb|EHZ14260.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
Length = 810
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEA 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|308163329|gb|EFO65679.1| ClpB protein [Giardia lamblia P15]
Length = 882
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE+ + V GQE A+ +C ++ T+ L L G G GK Y+ I
Sbjct: 576 LEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFLGSSGVGKTYLAKTIAEE 635
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFP----NENHVSLYRL----------QLTNWIISNVTA 120
++ +S IH E H S+ RL + + V+
Sbjct: 636 LYD------------SVDSMIHIDMSEYTEQH-SVSRLIGAPPGYVGYEQAGQLTEAVSR 682
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMNT 176
A+ +FDE++K +L +++ +D + N + F NT+ + SN G E++
Sbjct: 683 KRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRELLQC 742
Query: 177 F 177
+
Sbjct: 743 Y 743
>gi|159117563|ref|XP_001709001.1| ClpB protein [Giardia lamblia ATCC 50803]
gi|157437116|gb|EDO81327.1| ClpB protein [Giardia lamblia ATCC 50803]
Length = 882
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE+ + V GQE A+ +C ++ T+ L L G G GK Y+ I
Sbjct: 576 LEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFLGSSGVGKTYLAKTIAEE 635
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFP----NENHVSLYRL----------QLTNWIISNVTA 120
++ +S IH E H S+ RL + + V+
Sbjct: 636 LYD------------SVDSMIHIDMSEYTEQH-SVSRLIGAPPGYVGYEQAGQLTEAVSR 682
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMNT 176
A+ +FDE++K +L +++ +D + N + F NT+ + SN G E++
Sbjct: 683 KRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRELLQC 742
Query: 177 F 177
+
Sbjct: 743 Y 743
>gi|384490395|gb|EIE81617.1| hypothetical protein RO3G_06322 [Rhizopus delemar RA 99-880]
Length = 951
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTK-ALAISLHGLPGTGKNYVTDFIVSS 74
LE+ LK + GQ I + A++ QN +H+ + L G G GK + + +
Sbjct: 259 LEDALKSRIVGQLGPIYALASAIRRK-QNGWHDEEHPLVFLFCGSSGVGKTELAKALAQN 317
Query: 75 IFKRYKDKG-----TSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFI 127
+ + DKG S F HK + SR +V QLT + C A+ +
Sbjct: 318 LHGKQMDKGFIRIDMSEFQHKHDVSRFIGSPPGYVGYDEGGQLTE----KLKECPNAVVL 373
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
DEV+K +L +++ D + + + ++ IF+ SN EI + LR
Sbjct: 374 LDEVEKAHPDVLTIMLQLFDEGRITDGKGTTVECKDAIFIMTSNLAQHEIADEAELLR 431
>gi|415750498|ref|ZP_11478340.1| clpC [Streptococcus pneumoniae SV35]
gi|415753392|ref|ZP_11480374.1| clpC [Streptococcus pneumoniae SV36]
gi|381309039|gb|EIC49882.1| clpC [Streptococcus pneumoniae SV36]
gi|381316348|gb|EIC57098.1| clpC [Streptococcus pneumoniae SV35]
Length = 810
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ + +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGASPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|383853509|ref|XP_003702265.1| PREDICTED: caseinolytic peptidase B protein homolog [Megachile
rotundata]
Length = 670
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 16/178 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+++ GQ+ AIS + ++ L G G GK + + + I
Sbjct: 318 LEQRLKKYIVGQDGAISIVASTIRRKENGWIDEKHPLVFLFLGSSGIGKTELAKQLAAYI 377
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
K K +G R H+ I P QLT + C A+ +F
Sbjct: 378 HKN-KPEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTK----QLRKCPNAVVLF 432
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
DEVDK +L V++ D + + I +N IF+ SN I ++LR+
Sbjct: 433 DEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFVMTSNLASEVIAEHAVQLRE 490
>gi|306826128|ref|ZP_07459463.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304431604|gb|EFM34585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 810
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
IF R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 IFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|54293795|ref|YP_126210.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Lens]
gi|53753627|emb|CAH15085.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
pneumophila str. Lens]
Length = 755
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +E++
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASELV 616
>gi|185178951|ref|ZP_02964709.1| chaperone ClpB [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|184209225|gb|EDU06268.1| chaperone ClpB [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
Length = 347
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 174
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 169 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 228
Query: 175 NTFLELRKS 183
N +EL+K+
Sbjct: 229 NALMELQKT 237
>gi|357236003|ref|ZP_09123346.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
gi|356883985|gb|EHI74185.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
Length = 813
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 5 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPG 61
+K Q+ N R L E +L + V GQE A+S + A++ N R + G G
Sbjct: 496 EKMTQADNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNRSGIRTGKRPIGSFMFLGPTG 555
Query: 62 TGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 114
GK + + +F R+ S ++ KF SR++ +V + +
Sbjct: 556 VGKTELAKALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGEL 609
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 170
V ++ +FDEV+K + +V++ +D + + Q++F NTI + SN G
Sbjct: 610 TEKVRQKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRQVNFSNTIIIMTSNLGA 669
Query: 171 TEI 173
T +
Sbjct: 670 TAL 672
>gi|148261529|ref|YP_001235656.1| ATP-dependent Clp protease ATP-binding protein ClpA [Acidiphilium
cryptum JF-5]
gi|326405017|ref|YP_004285099.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidiphilium
multivorum AIU301]
gi|338983940|ref|ZP_08633078.1| ClpA protein [Acidiphilium sp. PM]
gi|146403210|gb|ABQ31737.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Acidiphilium
cryptum JF-5]
gi|325051879|dbj|BAJ82217.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidiphilium
multivorum AIU301]
gi|338207140|gb|EGO95139.1| ClpA protein [Acidiphilium sp. PM]
Length = 775
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRTLERDLKSMVFGQDSAIEALSAAIKLARAGLRDAEKPIGCYLFSGPTGVGKTEVARQL 514
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + +V + + DE
Sbjct: 515 ASTLGIELTRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDSVDQHPHCVLLLDE 571
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
++K L ++++ +DH + + + F+N I + +N+G ++ T
Sbjct: 572 IEKAHPDLFNILLQVMDHGKLTDHNGKTVDFRNVILIMTTNAGAADMAKT 621
>gi|298291486|ref|YP_003693425.1| ATP-dependent Clp protease ATP-binding subunit clpA [Starkeya
novella DSM 506]
gi|296927997|gb|ADH88806.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Starkeya
novella DSM 506]
Length = 812
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK+ V+GQ+ AI + A+K K + L P G GK V + SS
Sbjct: 460 LETTLKRVVYGQDKAIEALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLASS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTISRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L ++++ +DH + + Q+ F+N I + +N+G ++ + +S+
Sbjct: 577 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADLTKSAFGFTRSK 631
>gi|398378656|ref|ZP_10536812.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
AP16]
gi|397724308|gb|EJK84779.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
AP16]
Length = 841
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + A+K K + + P G GK V + SS
Sbjct: 468 LEQELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGCYIFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH ++ + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|222085851|ref|YP_002544382.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
gi|221723299|gb|ACM26455.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 843
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + A+K K + + P G GK V + SS
Sbjct: 470 LEQELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGCYIFSGPTGVGKTEVAKQLASS 529
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 530 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 586
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH ++ + +I F+N I + +N+G +E+
Sbjct: 587 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEM 630
>gi|407973259|ref|ZP_11154171.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor indicus C115]
gi|407431100|gb|EKF43772.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor indicus C115]
Length = 824
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQE AI + A+K K + L P G GK V + +S
Sbjct: 467 LETELKRVVYGQEAAIDALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + +I F+N I + +N+G +++
Sbjct: 584 AHPDLFNILLQVMDHGQLTDHNGKKIDFRNVILIMTTNAGASDL 627
>gi|156089233|ref|XP_001612023.1| Clp amino terminal domain containing protein [Babesia bovis]
gi|154799277|gb|EDO08455.1| Clp amino terminal domain containing protein [Babesia bovis]
Length = 1005
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFI 71
+R LE++L + V G E A+ +I A++ N + + + L G PG GK+ + +
Sbjct: 650 IRNLEQELHKSVVGHEEAVKNIAKAIRRAKTNIKNPERPIGSFLFCGPPGVGKSEIAKTL 709
Query: 72 VSSIFKRYK----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F D H + + P QLT + N ++ +
Sbjct: 710 TKLMFTEDNLIKLDMSEYNEPHSISRILGSPPGYKGHDSGGQLTEKLRKN----PYSVVM 765
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSG 169
FDE++K + +L++++ ++ + + +SF+NTI + SN G
Sbjct: 766 FDEIEKAHRNVLNILLQILEDGKLTDSKNQTVSFKNTIIIMTSNVG 811
>gi|374260383|ref|ZP_09618982.1| ATP binding protease component ClpA [Legionella drancourtii LLAP12]
gi|363539324|gb|EHL32719.1| ATP binding protease component ClpA [Legionella drancourtii LLAP12]
Length = 755
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 452 LRNLERDLKLLVYGQDQAITALSSAIKLGRSGLREPQKPVGCFLFAGPTGVGKTEVTRQL 511
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 512 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 568
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G +E++
Sbjct: 569 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGASELV 616
>gi|404319054|ref|ZP_10966987.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
anthropi CTS-325]
Length = 824
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|239832058|ref|ZP_04680387.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ochrobactrum
intermedium LMG 3301]
gi|444310396|ref|ZP_21146018.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
intermedium M86]
gi|239824325|gb|EEQ95893.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ochrobactrum
intermedium LMG 3301]
gi|443486204|gb|ELT48984.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ochrobactrum
intermedium M86]
Length = 824
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|153009351|ref|YP_001370566.1| ATP-dependent Clp protease ATP-binding protein ClpA [Ochrobactrum
anthropi ATCC 49188]
gi|151561239|gb|ABS14737.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ochrobactrum
anthropi ATCC 49188]
Length = 824
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+LAI + ++K K + L P G GK V + SS
Sbjct: 464 LDAELKRVVYGQDLAIEALSASIKLARAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 581 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 624
>gi|239635874|ref|ZP_04676897.1| ATPase AAA-2 domain protein [Staphylococcus warneri L37603]
gi|239598498|gb|EEQ80972.1| ATPase AAA-2 domain protein [Staphylococcus warneri L37603]
Length = 882
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 14/176 (7%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNY 66
I+ + +R L+ +K + GQ+ AI+ I A ++ + HN L G G GK
Sbjct: 570 IELNRLRSLKAVMKSQIIGQDDAINTIANAVIRKKLGFKQHNHPVGVFMLLGTTGVGKTE 629
Query: 67 VTDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTAC 121
+ +++K D + H+ S++ P +V R ++ V
Sbjct: 630 TAKILNRTLYKDESNIIRFDMSEYQKDHEV-SKLIGPPPGYVGYGR---DGDLVKTVLEH 685
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEI 173
A+ +FDEV+K + D+++ D + N + +F I L SN G ++I
Sbjct: 686 PNAVILFDEVEKAHPKIFDILLQVFDDARLTNSLGEVANFSECIILLTSNIGTSDI 741
>gi|68171591|ref|ZP_00544963.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis
str. Sapulpa]
gi|88658335|ref|YP_507379.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Ehrlichia
chaffeensis str. Arkansas]
gi|67998986|gb|EAM85665.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599792|gb|ABD45261.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Ehrlichia
chaffeensis str. Arkansas]
Length = 765
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ LEE LK+ + GQ+ AISH+ ++K + K LA L P G GK + +
Sbjct: 461 VKNLEENLKKDIFGQDFAISHLVDSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELARQL 520
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + + S ++ H + I P +V + L + +++ ++ + D
Sbjct: 521 ANHMGMKLIRFDMSEYMESHAISKIIGSP-PGYVGYDQGGL---LTDSISRHQYSVLLLD 576
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
E++K + ++++ +D+ V + +++F N + + +N+G E+
Sbjct: 577 EIEKAHSDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFEL 624
>gi|313885400|ref|ZP_07819150.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619130|gb|EFR30569.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
Length = 819
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 28/185 (15%)
Query: 6 KFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGK 64
K +S + LEE+L + V GQE A+S + A++ + + + + L G G GK
Sbjct: 503 KMTESKRLVHLEEELHERVIGQEEAVSSVSRAIRRAYSGLKNPNRPIGSFLFLGPTGVGK 562
Query: 65 NYVTDFIVSSIF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTN 112
+ + S++F Y +K T SR V + + QLT
Sbjct: 563 TELAKALASAMFGSQDNMIRVDMSEYMEKHTVSRLVGAPPGYVGYDEAG-------QLT- 614
Query: 113 WIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNS 168
V ++ + DEV+K + ++++ D + + ++ F+NTI + SN
Sbjct: 615 ---EQVRQKPYSVILLDEVEKAHPDVFNILLQVFDDGHLTDGKGRKVDFRNTIIIMTSNM 671
Query: 169 GGTEI 173
G T +
Sbjct: 672 GATAL 676
>gi|440226535|ref|YP_007333626.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhizobium
tropici CIAT 899]
gi|440038046|gb|AGB71080.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhizobium
tropici CIAT 899]
Length = 844
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + ++K K + + P G GK V + SS
Sbjct: 468 LEQELRSVVYGQDTAIEALSTSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH A+ + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIFNILLQVMDHGALTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|19552991|ref|NP_600993.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62390668|ref|YP_226070.1| Clp family ATP-binding protease [Corynebacterium glutamicum ATCC
13032]
gi|21324559|dbj|BAB99183.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326006|emb|CAF20169.1| PUTATIVE CLP-FAMILY ATP-BINDING PROTEASE [Corynebacterium
glutamicum ATCC 13032]
gi|385143897|emb|CCH24936.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 595
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISL-HGLPGTGKNYVTDFIVSS 74
++++L + V Q LA + + L+ + + ++ L+ L G G GK + +
Sbjct: 286 IKDKLDEKVMAQSLATTVVARRLQLVVADLHDKSRPLSNFLFTGPTGVGKTELVKQLARV 345
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKF 134
+F T R + +F+ F E+ + L+R +LT + AI + DEV+K
Sbjct: 346 LFG----DDTGRLI-RFDMS-EFALESSLDLFRSELTRRVADQ----GNAIVLLDEVEKA 395
Query: 135 PKGLLDVIIPFIDHHAV---YN-QISFQNTIFLFLSNSGGTEIMNTF 177
+ + +++ +D + YN ++SF NT ++ ++ + G+EI T
Sbjct: 396 DRAIARLLLQVLDDGRLSDDYNREVSFLNT-YIVMTTNAGSEIFETI 441
>gi|390351646|ref|XP_786389.2| PREDICTED: caseinolytic peptidase B protein homolog
[Strongylocentrotus purpuratus]
Length = 544
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 15/192 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L + + GQ+ AI+ + A++ L G G GK + I +
Sbjct: 179 LEQRLTEFIIGQDGAIATVAAAVRRKENGWMDEDHPLVFLFLGSSGIGKTELAKQIARYM 238
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K K D + H+ I P QLT + N A+ +FD
Sbjct: 239 HKDVKNGFIRMDMSEYQEKHEVAKFIGAPPGYVGHDQGGQLTKKLKQNPN----AVVLFD 294
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSEC 185
EVDK +L +++ D + + I ++ IF+ SN EI + L+LR+ E
Sbjct: 295 EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFVMTSNIASDEIASHALQLRR-EA 353
Query: 186 IEFIFQCQPLKV 197
+ Q Q +V
Sbjct: 354 KAMMKQRQTAQV 365
>gi|334316032|ref|YP_004548651.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti AK83]
gi|407720428|ref|YP_006840090.1| ClpA protein [Sinorhizobium meliloti Rm41]
gi|418404196|ref|ZP_12977664.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Sinorhizobium
meliloti CCNWSX0020]
gi|334095026|gb|AEG53037.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
meliloti AK83]
gi|359501851|gb|EHK74445.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Sinorhizobium
meliloti CCNWSX0020]
gi|407318660|emb|CCM67264.1| ClpA homolog protein [Sinorhizobium meliloti Rm41]
Length = 838
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|150396336|ref|YP_001326803.1| ATP-dependent Clp protease ATP-binding protein ClpA [Sinorhizobium
medicae WSM419]
gi|150027851|gb|ABR59968.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
medicae WSM419]
Length = 838
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|15965240|ref|NP_385593.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti 1021]
gi|384529200|ref|YP_005713288.1| ATP-dependent Clp protease ATP-binding protein ClpA [Sinorhizobium
meliloti BL225C]
gi|384536518|ref|YP_005720603.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti SM11]
gi|433613258|ref|YP_007190056.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti GR4]
gi|15074420|emb|CAC46066.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811376|gb|AEG04045.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sinorhizobium
meliloti BL225C]
gi|336033410|gb|AEH79342.1| ATP-dependent Clp protease ATP-binding subunit protein
[Sinorhizobium meliloti SM11]
gi|429551448|gb|AGA06457.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
meliloti GR4]
Length = 838
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEQELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|406879045|gb|EKD27779.1| hypothetical protein ACD_79C00582G0001, partial [uncultured
bacterium]
Length = 502
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E L V GQ+ A+ ++ A+K N + + L L G G GK Y+ +
Sbjct: 195 MESDLSNAVVGQKEAVLNVSRAIKRSRANLQNPNRPLGSFLFLGPTGVGKTYLAKKLAEF 254
Query: 75 IFKRYKDKGT---SRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F T S F KF SR+ +V + + V +I +FDE
Sbjct: 255 MFGNRDALITIDMSEFAEKFAVSRLTGSPPGYVGH---EEGGQLTEKVRRKPYSIVLFDE 311
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 174
++K ++D+ + ++ + + + F+NTI + SN G +IM
Sbjct: 312 IEKAHPDIMDIFLQILEDGKLTDSLGRAVDFRNTILIMTSNIGSHKIM 359
>gi|373458267|ref|ZP_09550034.1| ATPase AAA-2 domain protein [Caldithrix abyssi DSM 13497]
gi|371719931|gb|EHO41702.1| ATPase AAA-2 domain protein [Caldithrix abyssi DSM 13497]
Length = 822
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 4 TDKFIQSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLP 60
TD+ S + ++L+ ++LK+ V GQ+ AI I A++ + + L G
Sbjct: 489 TDRIALSESEKLLKMNDELKKRVIGQDDAIETITRAIRRARAGLKDPNRPIGSFLFLGPT 548
Query: 61 GTGKNYVTDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIIS 116
G GK Y+ + +F+ S ++ KFN SR+ +V + +
Sbjct: 549 GVGKTYLAKQLAEYLFENPNTLIRVDMSEYMEKFNVSRLIGSPPGYVG---YEEGGILTE 605
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 172
V ++ +FDE++K + ++++ +D ++ +++ F+NTI + SN G
Sbjct: 606 QVRRHPYSVILFDEIEKAHPDIFNILLQVLDDGILTDSLGHRVDFKNTIIIMTSNVGVKN 665
Query: 173 IMNT 176
+ NT
Sbjct: 666 LKNT 669
>gi|390448093|ref|ZP_10233716.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor aquibiodomus RA22]
gi|389666732|gb|EIM78176.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Nitratireductor aquibiodomus RA22]
Length = 819
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 466 LEDELKRVVYGQDAAITALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGASDM 626
>gi|421277771|ref|ZP_15728586.1| exopolyphosphatase [Streptococcus mitis SPAR10]
gi|395873595|gb|EJG84686.1| exopolyphosphatase [Streptococcus mitis SPAR10]
Length = 810
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417936448|ref|ZP_12579762.1| Clp amino terminal domain protein [Streptococcus infantis X]
gi|343400883|gb|EGV13392.1| Clp amino terminal domain protein [Streptococcus infantis X]
Length = 810
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|335030235|ref|ZP_08523729.1| chaperone protein ClpB [Streptococcus infantis SK1076]
gi|334266666|gb|EGL85140.1| chaperone protein ClpB [Streptococcus infantis SK1076]
Length = 810
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322391259|ref|ZP_08064730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
gi|321145863|gb|EFX41253.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
Length = 819
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 515 LEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 574
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 575 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 628
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 629 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 678
>gi|322387004|ref|ZP_08060617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|419844139|ref|ZP_14367439.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
gi|321142148|gb|EFX37640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|385702161|gb|EIG39311.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
Length = 810
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQE A+S I A++ + +N + + + G G GK + +
Sbjct: 506 LETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|210111849|gb|ACJ07157.1| torsin 3A [Sus scrofa]
Length = 196
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L+ +HGQ LA + A++ + + + KALA+S HG GTGKN+V +
Sbjct: 130 NFTGLKADLRVRLHGQHLARELVLAAVRGYLELPQPD-KALALSFHGSSGTGKNFVARLL 188
Query: 72 V 72
Sbjct: 189 A 189
>gi|300813508|ref|ZP_07093849.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512380|gb|EFK39539.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 449
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 67
++ ++ L+E LK+ V GQ+ AI + A+K + N + G G GK ++
Sbjct: 193 ETERLKTLDEDLKKKVKGQDQAIDVLARAVKRARIGLKTPNKPIGSFIFVGPTGVGKTFL 252
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
T + +F ++ S ++ K+ SR+ +V QLT V
Sbjct: 253 TKTLAEELFGSPENMIRIDMSEYMEKYTVSRLVGSPPGYVGYDEGGQLTEA----VRTKP 308
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIM 174
++ +FDE++K + ++++ +D A ++F++T+ + SN G ++
Sbjct: 309 YSVILFDEIEKAHPDVFNILLQILDEGRLTDAQGRTVNFKDTVIVMTSNVGANSLV 364
>gi|378825801|ref|YP_005188533.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
fredii HH103]
gi|365178853|emb|CCE95708.1| ATP-dependent Clp protease ATP-binding subunit clpA [Sinorhizobium
fredii HH103]
Length = 830
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|227821889|ref|YP_002825859.1| ATP-dependent specificity subunit of ClpA-ClpP serine protease
[Sinorhizobium fredii NGR234]
gi|227340888|gb|ACP25106.1| ATP-dependent specificity subunit of ClpA-ClpP serine protease
[Sinorhizobium fredii NGR234]
Length = 830
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFSGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|395787521|ref|ZP_10467120.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
birtlesii LL-WM9]
gi|395411036|gb|EJF77571.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
birtlesii LL-WM9]
Length = 783
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+++KQ V+GQ+ AIS + +K K + L P G GK V + SS
Sbjct: 457 LEKEIKQAVYGQDQAISALVSCIKLARAGLREPNKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 I--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 125
+ Y ++ T +R + I F LT+ + N A+
Sbjct: 517 LSIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGG-------LLTDAVDQN----PHAV 565
Query: 126 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ DE++K L ++++ +D+ + + +I F N I + +N+G +E+
Sbjct: 566 LLLDEIEKAHPELFNILLQVMDYGKLTDHNGKKIDFSNIILIMTTNAGASEM 617
>gi|255084637|ref|XP_002508893.1| predicted protein [Micromonas sp. RCC299]
gi|226524170|gb|ACO70151.1| predicted protein [Micromonas sp. RCC299]
Length = 493
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 7 FIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNY 66
F + + L ++HGQ+ A++ + A+ +H + N K L SLHG PG GK+Y
Sbjct: 34 FCREGACERVRAHLAANLHGQDTAVNLLADAVCDHVASPRPN-KPLVASLHGSPGIGKSY 92
Query: 67 VTDFIVSSIFKRYKD 81
+ +++ D
Sbjct: 93 FHQLLAQALYNATGD 107
>gi|419635663|ref|ZP_14167962.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 55037]
gi|380612266|gb|EIB31798.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 55037]
Length = 578
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|222824062|ref|YP_002575636.1| ATP-dependent ClpAP protease, ATP-binding subunit ClpA
[Campylobacter lari RM2100]
gi|222539284|gb|ACM64385.1| ATP-dependent ClpAP protease, ATP-binding subunit ClpA
[Campylobacter lari RM2100]
Length = 709
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYV 67
QS ++ LE+ LKQ++ GQ+ AI +C LK + + NT G G GK +
Sbjct: 414 QSKILKNLEQNLKQNIFGQDEAIKALCSILKQSYAGLKAKNTPKGVFLFTGSSGVGKTEL 473
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDRAI 125
+ + + S + K + S++ + +V ++SN + ++
Sbjct: 474 AKNLAQILNLNLERFDMSEYSQKHDVSKLIGTSAGYVGYE----DGGLLSNSIRKNPFSV 529
Query: 126 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
+FDE++K L + + D+ ++ + + F+NTI + SN G E
Sbjct: 530 ILFDEIEKAHPDLTNTFLQIFDNASLTDNSGLKADFKNTIIIMTSNLGLKE 580
>gi|430003976|emb|CCF19767.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium sp.]
Length = 839
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + ++K R N A G G GK V + SS
Sbjct: 466 LEKELRSVVYGQDKAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + +V ++ + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDSVDQHPHSVVLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH ++ + +I F+N I + +N+G +E+
Sbjct: 583 AHPDIFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEM 626
>gi|386748764|ref|YP_006221971.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Helicobacter
cetorum MIT 00-7128]
gi|384555007|gb|AFI03341.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Helicobacter
cetorum MIT 00-7128]
Length = 734
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK + QE AI I A+K + N K + L P G GK + +
Sbjct: 432 LRNLETTLKNKIFSQERAIEAISNAIKIQYCGLSQNNKPMGSFLFAGPSGVGKTQLAKEL 491
Query: 72 VSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
++ F+R+ D + H I PN +V + L +++ + + +
Sbjct: 492 AKALDLHFERF-DMSEYKEPHSIAKLIGSPN-GYVGFEQGGL---LVNALKKHPHCVLLL 546
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTE 172
DE++K + D+++ +D+ + N+ SF++ I + SN G +
Sbjct: 547 DEIEKAHADVYDLLLQVMDNATLSDNLGNKASFKHAILIMTSNIGSQD 594
>gi|419628019|ref|ZP_14160900.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23263]
gi|380605819|gb|EIB25771.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23263]
Length = 578
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|340711024|ref|XP_003394082.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
terrestris]
Length = 643
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E +K ++ LE++L+Q++ GQ AIS + ++ L G
Sbjct: 277 EIMKEKELEERRRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 336
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNW 113
G GK + + + I K K +G R H+ I P QLT
Sbjct: 337 GIGKTELAKQLAAYIHKN-KQEGFIRLDMSEYQEKHEVAKLIGAPPGYIGHDDGGQLTKL 395
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ C A+ +FDEVDK +L V++ D + + I +N IF+ SN
Sbjct: 396 L----RKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLA 451
Query: 170 GTEIMNTFLELRKS 183
I + + LR+
Sbjct: 452 SEVIADHAVHLREE 465
>gi|148984497|ref|ZP_01817785.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|387758341|ref|YP_006065320.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|418233175|ref|ZP_12859758.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|418236302|ref|ZP_12862870.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|147923274|gb|EDK74388.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|301800930|emb|CBW33589.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|353884753|gb|EHE64548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|353892534|gb|EHE72282.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|429320308|emb|CCP33650.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034183]
gi|429322128|emb|CCP35624.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994039]
gi|429323948|emb|CCP31665.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994038]
Length = 810
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFKRYKDK---GTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F S ++ KF SR++ +V + + V ++ +FDE
Sbjct: 566 LFDEESALIRFDMSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLLFDE 622
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
V+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 623 VEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|15904041|ref|NP_359591.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae R6]
gi|421267182|ref|ZP_15718059.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
gi|15459704|gb|AAL00802.1| Class III stress response-related ATPase, truncation [Streptococcus
pneumoniae R6]
gi|395865567|gb|EJG76706.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
Length = 762
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|414157618|ref|ZP_11413915.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
gi|410872054|gb|EKS19999.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|410477532|ref|YP_006744291.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444386653|ref|ZP_21184680.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444391106|ref|ZP_21189019.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444393488|ref|ZP_21191134.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444396370|ref|ZP_21193894.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444398480|ref|ZP_21195962.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444399614|ref|ZP_21197061.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444402695|ref|ZP_21199850.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444405756|ref|ZP_21202610.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444408097|ref|ZP_21204764.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444410598|ref|ZP_21207126.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444412498|ref|ZP_21208819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444415474|ref|ZP_21211711.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444418459|ref|ZP_21214438.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444421115|ref|ZP_21216869.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444422920|ref|ZP_21218556.1| ATPase family [Streptococcus pneumoniae PNI0446]
gi|406370477|gb|AFS44167.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444254404|gb|ELU60837.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444254806|gb|ELU61182.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444255264|gb|ELU61620.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444259209|gb|ELU65525.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444259527|gb|ELU65840.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444266016|gb|ELU71993.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444268475|gb|ELU74329.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444271693|gb|ELU77444.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444272352|gb|ELU78071.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444274460|gb|ELU80107.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444277063|gb|ELU82587.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444279857|gb|ELU85241.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444281422|gb|ELU86740.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444283212|gb|ELU88417.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444287731|gb|ELU92644.1| ATPase family [Streptococcus pneumoniae PNI0446]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419818004|ref|ZP_14342123.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
gi|404465173|gb|EKA10663.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|405761809|ref|YP_006702405.1| stress response-related Clp ATPase [Streptococcus pneumoniae
SPNA45]
gi|404278698|emb|CCM09331.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPNA45]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421489259|ref|ZP_15936642.1| ATPase, AAA family [Streptococcus oralis SK304]
gi|400366262|gb|EJP19297.1| ATPase, AAA family [Streptococcus oralis SK304]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|401683711|ref|ZP_10815596.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
gi|400186751|gb|EJO20956.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421310600|ref|ZP_15761222.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
gi|395908215|gb|EJH19098.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
Length = 795
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421312955|ref|ZP_15763552.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
gi|395907707|gb|EJH18597.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
Length = 795
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421299648|ref|ZP_15750329.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
gi|395898028|gb|EJH08977.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
Length = 685
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 381 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 440
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 441 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 494
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 495 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 544
>gi|421290761|ref|ZP_15741508.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|421306157|ref|ZP_15756808.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
gi|395885665|gb|EJG96687.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|395903841|gb|EJH14764.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421282187|ref|ZP_15732980.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
gi|395878634|gb|EJG89697.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
Length = 804
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 500 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 559
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 560 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 613
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 614 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 663
>gi|421271635|ref|ZP_15722485.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
gi|395865774|gb|EJG76912.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
Length = 795
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|421246491|ref|ZP_15702981.1| clpC [Streptococcus pneumoniae 2082170]
gi|395616101|gb|EJG76114.1| clpC [Streptococcus pneumoniae 2082170]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421235043|ref|ZP_15691657.1| clpC [Streptococcus pneumoniae 2061617]
gi|395599201|gb|EJG59381.1| clpC [Streptococcus pneumoniae 2061617]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421228460|ref|ZP_15685153.1| clpC [Streptococcus pneumoniae 2072047]
gi|395592354|gb|EJG52625.1| clpC [Streptococcus pneumoniae 2072047]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421226057|ref|ZP_15682790.1| clpC [Streptococcus pneumoniae 2070768]
gi|395587868|gb|EJG48207.1| clpC [Streptococcus pneumoniae 2070768]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421218984|ref|ZP_15675871.1| clpC [Streptococcus pneumoniae 2070335]
gi|395581581|gb|EJG42052.1| clpC [Streptococcus pneumoniae 2070335]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|421209901|ref|ZP_15666910.1| clpC [Streptococcus pneumoniae 2070005]
gi|395572071|gb|EJG32672.1| clpC [Streptococcus pneumoniae 2070005]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|385261591|ref|ZP_10039711.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
gi|385192794|gb|EIF40189.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419767404|ref|ZP_14293559.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
gi|383353144|gb|EID30769.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418976927|ref|ZP_13524766.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
gi|383350654|gb|EID28517.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418968298|ref|ZP_13519916.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
gi|383340682|gb|EID18974.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419779161|ref|ZP_14305039.1| ATPase, AAA family [Streptococcus oralis SK10]
gi|383186528|gb|EIC78996.1| ATPase, AAA family [Streptococcus oralis SK10]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419780450|ref|ZP_14306299.1| ATPase, AAA family [Streptococcus oralis SK100]
gi|383185250|gb|EIC77747.1| ATPase, AAA family [Streptococcus oralis SK100]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419781955|ref|ZP_14307766.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183596|gb|EIC76131.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419509280|ref|ZP_14048928.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
gi|379609571|gb|EHZ74309.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|419535697|ref|ZP_14075191.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
gi|379561837|gb|EHZ26852.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
Length = 795
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|419476591|ref|ZP_14016422.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
gi|379557307|gb|EHZ22353.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|358465211|ref|ZP_09175162.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065969|gb|EHI76139.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418203436|ref|ZP_12839859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|353864884|gb|EHE44794.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418201146|ref|ZP_12837585.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|419524681|ref|ZP_14064250.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|421243972|ref|ZP_15700481.1| clpC [Streptococcus pneumoniae 2081074]
gi|353862579|gb|EHE42510.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|379554905|gb|EHZ19977.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|395605648|gb|EJG65767.1| clpC [Streptococcus pneumoniae 2081074]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418199056|ref|ZP_12835508.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|419452127|ref|ZP_13992107.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|419519921|ref|ZP_14059524.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
gi|353859471|gb|EHE39422.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|379621346|gb|EHZ85994.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|379638075|gb|EIA02621.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
Length = 795
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 491 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 550
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 551 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 604
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 605 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 654
>gi|418196859|ref|ZP_12833330.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
gi|353858891|gb|EHE38850.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418194749|ref|ZP_12831235.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|418203447|ref|ZP_12839869.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|419456451|ref|ZP_13996405.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|421286520|ref|ZP_15737291.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
gi|353854888|gb|EHE34859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|353864578|gb|EHE44490.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|379626414|gb|EHZ91032.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|395884758|gb|EJG95794.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418172353|ref|ZP_12808970.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
gi|353833556|gb|EHE13666.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
Length = 804
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 500 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 559
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 560 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 613
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 614 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 663
>gi|418147450|ref|ZP_12784222.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|418190429|ref|ZP_12826938.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
gi|353810530|gb|EHD90781.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|353851688|gb|EHE31679.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418097329|ref|ZP_12734434.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
gi|353765952|gb|EHD46493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|418077429|ref|ZP_12714658.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|419483214|ref|ZP_14022997.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
gi|353745603|gb|EHD26272.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|379577746|gb|EHZ42664.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417923255|ref|ZP_12566725.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
gi|342837188|gb|EGU71386.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417916971|ref|ZP_12560537.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
gi|342827718|gb|EGU62100.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417935180|ref|ZP_12578500.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
gi|340771750|gb|EGR94265.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417847729|ref|ZP_12493691.1| chaperone protein ClpB [Streptococcus mitis SK1073]
gi|339456563|gb|EGP69154.1| chaperone protein ClpB [Streptococcus mitis SK1073]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417793983|ref|ZP_12441246.1| chaperone protein ClpB [Streptococcus oralis SK255]
gi|334271093|gb|EGL89487.1| chaperone protein ClpB [Streptococcus oralis SK255]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|417687654|ref|ZP_12336921.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|418160938|ref|ZP_12797634.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|419522151|ref|ZP_14061742.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|421237290|ref|ZP_15693881.1| clpC [Streptococcus pneumoniae 2071004]
gi|332071464|gb|EGI81958.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|353820203|gb|EHE00391.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|379536138|gb|EHZ01329.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|395599867|gb|EJG60028.1| clpC [Streptococcus pneumoniae 2071004]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322377948|ref|ZP_08052436.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
gi|321281124|gb|EFX58136.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|322375169|ref|ZP_08049683.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
gi|321280669|gb|EFX57708.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|315612206|ref|ZP_07887120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
gi|315315599|gb|EFU63637.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307702569|ref|ZP_07639521.1| clpC [Streptococcus oralis ATCC 35037]
gi|307623685|gb|EFO02670.1| clpC [Streptococcus oralis ATCC 35037]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307705869|ref|ZP_07642707.1| chaperone clpB 1 [Streptococcus mitis SK597]
gi|307620530|gb|EFN99628.1| chaperone clpB 1 [Streptococcus mitis SK597]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307711182|ref|ZP_07647604.1| clpC [Streptococcus mitis SK321]
gi|307617144|gb|EFN96322.1| clpC [Streptococcus mitis SK321]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307707859|ref|ZP_07644336.1| ClpC [Streptococcus mitis NCTC 12261]
gi|307616119|gb|EFN95315.1| ClpC [Streptococcus mitis NCTC 12261]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307068805|ref|YP_003877771.1| ATPase [Streptococcus pneumoniae AP200]
gi|417699571|ref|ZP_12348739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|418103933|ref|ZP_12741001.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|418126846|ref|ZP_12763748.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|418149532|ref|ZP_12786291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|418167857|ref|ZP_12804507.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|418192642|ref|ZP_12829141.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|418215401|ref|ZP_12842132.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|419454288|ref|ZP_13994255.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419472072|ref|ZP_14011928.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|419485415|ref|ZP_14025186.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|419487741|ref|ZP_14027500.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|419494317|ref|ZP_14034039.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|419504919|ref|ZP_14044582.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|419507059|ref|ZP_14046717.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|421207704|ref|ZP_15664747.1| clpC [Streptococcus pneumoniae 2090008]
gi|421230746|ref|ZP_15687404.1| clpC [Streptococcus pneumoniae 2061376]
gi|421239519|ref|ZP_15696080.1| clpC [Streptococcus pneumoniae 2071247]
gi|421241666|ref|ZP_15698207.1| clpC [Streptococcus pneumoniae 2080913]
gi|421246020|ref|ZP_15702515.1| clpC [Streptococcus pneumoniae 2081685]
gi|421250464|ref|ZP_15706914.1| clpC [Streptococcus pneumoniae 2082239]
gi|421293004|ref|ZP_15743735.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|421300205|ref|ZP_15750876.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|421315048|ref|ZP_15765632.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
gi|306410342|gb|ADM85769.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
pneumoniae AP200]
gi|332198608|gb|EGJ12691.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|353773496|gb|EHD53993.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|353794382|gb|EHD74739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|353810334|gb|EHD90586.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|353827601|gb|EHE07752.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|353854476|gb|EHE34454.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|353867691|gb|EHE47582.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|379543461|gb|EHZ08611.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|379580188|gb|EHZ45083.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|379584633|gb|EHZ49499.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|379591579|gb|EHZ56403.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|379604105|gb|EHZ68867.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|379604506|gb|EHZ69265.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379622426|gb|EHZ87061.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|395571807|gb|EJG32411.1| clpC [Streptococcus pneumoniae 2090008]
gi|395592548|gb|EJG52813.1| clpC [Streptococcus pneumoniae 2061376]
gi|395599653|gb|EJG59818.1| clpC [Streptococcus pneumoniae 2071247]
gi|395605942|gb|EJG66053.1| clpC [Streptococcus pneumoniae 2080913]
gi|395606134|gb|EJG66243.1| clpC [Streptococcus pneumoniae 2081685]
gi|395612041|gb|EJG72087.1| clpC [Streptococcus pneumoniae 2082239]
gi|395891252|gb|EJH02254.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|395899629|gb|EJH10568.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|395911632|gb|EJH22497.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|306828654|ref|ZP_07461847.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
gi|304429160|gb|EFM32247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|387627321|ref|YP_006063497.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|417695067|ref|ZP_12344251.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444381647|ref|ZP_21179853.1| ATPase family [Streptococcus pneumoniae PCS8106]
gi|444385299|ref|ZP_21183378.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|301795107|emb|CBW37577.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|332199016|gb|EGJ13097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444250579|gb|ELU57058.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|444253899|gb|ELU60346.1| ATPase family [Streptococcus pneumoniae PCS8106]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|293364467|ref|ZP_06611193.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
gi|291317313|gb|EFE57740.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
Length = 776
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 472 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 531
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 532 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 585
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 586 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 635
>gi|289168872|ref|YP_003447141.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
gi|288908439|emb|CBJ23281.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|270291875|ref|ZP_06198090.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
gi|270279403|gb|EFA25245.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|225857764|ref|YP_002739275.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
gi|225726282|gb|ACO22134.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|225859966|ref|YP_002741476.1| ClpB protein [Streptococcus pneumoniae 70585]
gi|225721797|gb|ACO17651.1| ClpB protein [Streptococcus pneumoniae 70585]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|194398319|ref|YP_002038791.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|418122270|ref|ZP_12759210.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|419481010|ref|ZP_14020811.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|419492127|ref|ZP_14031858.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|419500710|ref|ZP_14040401.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|419533394|ref|ZP_14072906.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|421276047|ref|ZP_15726873.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|194357986|gb|ACF56434.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|353790599|gb|EHD70981.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|379569176|gb|EHZ34150.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|379591208|gb|EHZ56037.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|379597822|gb|EHZ62619.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|379604297|gb|EHZ69058.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|395871801|gb|EJG82903.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|429316957|emb|CCP36686.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034156]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|182685132|ref|YP_001836879.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|303254856|ref|ZP_07340941.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|303259682|ref|ZP_07345658.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262149|ref|ZP_07348094.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264584|ref|ZP_07350503.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|303266107|ref|ZP_07352001.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|303269948|ref|ZP_07355685.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|387760270|ref|YP_006067248.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|418140535|ref|ZP_12777356.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|418181561|ref|ZP_12818126.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|419515691|ref|ZP_14055313.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|421269378|ref|ZP_15720240.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|421296966|ref|ZP_15747669.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
gi|182630466|gb|ACB91414.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|301802859|emb|CBW35637.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|302598127|gb|EFL65188.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|302636789|gb|EFL67279.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302639234|gb|EFL69693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640513|gb|EFL70923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|302644411|gb|EFL74664.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|302645954|gb|EFL76182.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|353841277|gb|EHE21334.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|353904381|gb|EHE79858.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|379634007|gb|EHZ98573.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|395866297|gb|EJG77428.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|395892540|gb|EJH03530.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|169834204|ref|YP_001695552.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
gi|168996706|gb|ACA37318.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168576066|ref|ZP_02721971.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|307128461|ref|YP_003880492.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|418075045|ref|ZP_12712291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|418087821|ref|ZP_12724986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|418133653|ref|ZP_12770519.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|418183745|ref|ZP_12820299.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|418217654|ref|ZP_12844329.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419432590|ref|ZP_13972715.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|419469997|ref|ZP_14009861.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|419496392|ref|ZP_14036106.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|419498572|ref|ZP_14038274.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|421303890|ref|ZP_15754551.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|421308397|ref|ZP_15759035.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
gi|183578054|gb|EDT98582.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|306485523|gb|ADM92392.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|353745219|gb|EHD25890.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|353755498|gb|EHD36101.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|353803889|gb|EHD84179.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|353846763|gb|EHE26791.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|353868467|gb|EHE48354.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|379542707|gb|EHZ07862.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|379591892|gb|EHZ56712.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|379597636|gb|EHZ62434.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|379626623|gb|EHZ91240.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|395898307|gb|EJH09252.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|395905200|gb|EJH16106.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168494045|ref|ZP_02718188.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|418079648|ref|ZP_12716867.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|418081852|ref|ZP_12719058.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|418090572|ref|ZP_12727722.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|418099535|ref|ZP_12736628.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|418106335|ref|ZP_12743385.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|418115713|ref|ZP_12752696.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|418117883|ref|ZP_12754849.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|418135979|ref|ZP_12772828.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|418174625|ref|ZP_12811231.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|419434821|ref|ZP_13974935.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|419441395|ref|ZP_13981435.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
gi|419465504|ref|ZP_14005392.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|183575907|gb|EDT96435.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|353745391|gb|EHD26061.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|353750174|gb|EHD30816.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|353759572|gb|EHD40156.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|353767755|gb|EHD48287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|353774297|gb|EHD54790.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|353783676|gb|EHD64103.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|353787084|gb|EHD67493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|353834711|gb|EHE14809.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|353899826|gb|EHE75393.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|379535630|gb|EHZ00828.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|379575063|gb|EHZ40000.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|379576052|gb|EHZ40981.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168489268|ref|ZP_02713467.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|221232896|ref|YP_002512050.1| stress response-related Clp ATPase [Streptococcus pneumoniae ATCC
700669]
gi|415701482|ref|ZP_11458391.1| clpC [Streptococcus pneumoniae 459-5]
gi|417680172|ref|ZP_12329565.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|418124567|ref|ZP_12761494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|418129107|ref|ZP_12765996.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|418138308|ref|ZP_12775142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|418179340|ref|ZP_12815917.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|418235382|ref|ZP_12861955.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|419474282|ref|ZP_14014127.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|421279960|ref|ZP_15730763.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|421295104|ref|ZP_15745822.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
gi|183572254|gb|EDT92782.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|220675358|emb|CAR69957.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae ATCC 700669]
gi|332071637|gb|EGI82130.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|353794179|gb|EHD74537.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|353797157|gb|EHD77494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|353840854|gb|EHE20916.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|353885105|gb|EHE64895.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|353899665|gb|EHE75234.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|379549351|gb|EHZ14461.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|381312670|gb|EIC53465.1| clpC [Streptococcus pneumoniae 459-5]
gi|395877188|gb|EJG88258.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|395891461|gb|EJH02456.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168486303|ref|ZP_02710811.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|418185965|ref|ZP_12822500.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|419511380|ref|ZP_14051018.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|419531233|ref|ZP_14070756.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|421214175|ref|ZP_15671125.1| clpC [Streptococcus pneumoniae 2070108]
gi|421216257|ref|ZP_15673174.1| clpC [Streptococcus pneumoniae 2070109]
gi|183570676|gb|EDT91204.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|353846558|gb|EHE26587.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|379570061|gb|EHZ35026.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|379630460|gb|EHZ95046.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|395577921|gb|EJG38450.1| clpC [Streptococcus pneumoniae 2070108]
gi|395578646|gb|EJG39160.1| clpC [Streptococcus pneumoniae 2070109]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|168484349|ref|ZP_02709301.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|168491727|ref|ZP_02715870.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225855688|ref|YP_002737200.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225862011|ref|YP_002743520.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298229669|ref|ZP_06963350.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255666|ref|ZP_06979252.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501710|ref|YP_003723650.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|387789235|ref|YP_006254303.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|417313663|ref|ZP_12100372.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|417697393|ref|ZP_12346568.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|418084021|ref|ZP_12721213.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|418086183|ref|ZP_12723358.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|418092818|ref|ZP_12729954.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|418095001|ref|ZP_12732124.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|418101678|ref|ZP_12738757.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|418108864|ref|ZP_12745897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|418111192|ref|ZP_12748207.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|418119692|ref|ZP_12756643.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|418142741|ref|ZP_12779548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|418151709|ref|ZP_12788451.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|418153979|ref|ZP_12790713.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|418158568|ref|ZP_12795277.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|418163308|ref|ZP_12799986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|418165520|ref|ZP_12802182.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|418168216|ref|ZP_12804862.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|418177016|ref|ZP_12813603.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|418219962|ref|ZP_12846623.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|418222255|ref|ZP_12848904.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|418224411|ref|ZP_12851046.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|418228695|ref|ZP_12855308.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|418239748|ref|ZP_12866294.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419424061|ref|ZP_13964269.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|419426151|ref|ZP_13966342.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|419428262|ref|ZP_13968439.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|419437016|ref|ZP_13977097.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|419439187|ref|ZP_13979250.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|419445722|ref|ZP_13985733.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|419447883|ref|ZP_13987884.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|419449982|ref|ZP_13989975.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|419461040|ref|ZP_14000962.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|419463359|ref|ZP_14003258.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|419490013|ref|ZP_14029758.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|419502861|ref|ZP_14042539.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|419526960|ref|ZP_14066511.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|419529168|ref|ZP_14068705.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|421212045|ref|ZP_15669022.1| clpC [Streptococcus pneumoniae 2070035]
gi|421232890|ref|ZP_15689526.1| clpC [Streptococcus pneumoniae 2080076]
gi|421271771|ref|ZP_15722618.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|421288605|ref|ZP_15739363.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
gi|172042451|gb|EDT50497.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|183574069|gb|EDT94597.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225723084|gb|ACO18937.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225726430|gb|ACO22281.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298237305|gb|ADI68436.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|327388939|gb|EGE87287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|332198820|gb|EGJ12902.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|353753545|gb|EHD34168.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|353755023|gb|EHD35633.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|353761488|gb|EHD42055.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|353762538|gb|EHD43097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|353768777|gb|EHD49300.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|353775321|gb|EHD55802.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|353780303|gb|EHD60762.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|353788805|gb|EHD69201.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|353802442|gb|EHD82737.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|353812032|gb|EHD92268.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|353815305|gb|EHD95525.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|353819750|gb|EHD99939.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|353825443|gb|EHE05608.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|353827300|gb|EHE07453.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|353836135|gb|EHE16223.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|353838975|gb|EHE19051.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|353872028|gb|EHE51897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|353872650|gb|EHE52514.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|353876943|gb|EHE56788.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|353879004|gb|EHE58832.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|353890783|gb|EHE70543.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|379138977|gb|AFC95768.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|379528913|gb|EHY94166.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|379529082|gb|EHY94334.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|379535532|gb|EHZ00733.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|379555566|gb|EHZ20633.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|379562812|gb|EHZ27821.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|379569542|gb|EHZ34512.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|379584483|gb|EHZ49351.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|379584999|gb|EHZ49862.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|379598076|gb|EHZ62871.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|379611303|gb|EHZ76030.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|379611623|gb|EHZ76346.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|379616138|gb|EHZ80838.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|379616557|gb|EHZ81252.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|379620926|gb|EHZ85576.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|395571524|gb|EJG32143.1| clpC [Streptococcus pneumoniae 2070035]
gi|395593125|gb|EJG53377.1| clpC [Streptococcus pneumoniae 2080076]
gi|395877330|gb|EJG88399.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|395885237|gb|EJG96264.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|148991946|ref|ZP_01821720.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|421221379|ref|ZP_15678210.1| clpC [Streptococcus pneumoniae 2070425]
gi|421223635|ref|ZP_15680412.1| clpC [Streptococcus pneumoniae 2070531]
gi|147928995|gb|EDK80006.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|395584367|gb|EJG44760.1| clpC [Streptococcus pneumoniae 2070425]
gi|395586094|gb|EJG46472.1| clpC [Streptococcus pneumoniae 2070531]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|148988840|ref|ZP_01820255.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147925651|gb|EDK76727.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|149012833|ref|ZP_01833778.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147763264|gb|EDK70203.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|149003057|ref|ZP_01827966.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149020113|ref|ZP_01835087.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|237650487|ref|ZP_04524739.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822387|ref|ZP_04598232.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974M2]
gi|418144802|ref|ZP_12781597.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|419458740|ref|ZP_13998679.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
gi|147758798|gb|EDK65794.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147930791|gb|EDK81772.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|353807268|gb|EHD87540.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|379528736|gb|EHY93990.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|148998004|ref|ZP_01825517.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147756014|gb|EDK63057.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
Length = 726
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|116516069|ref|YP_817407.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
gi|116076645|gb|ABJ54365.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|15902001|ref|NP_346605.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|111657990|ref|ZP_01408696.1| hypothetical protein SpneT_02000846 [Streptococcus pneumoniae
TIGR4]
gi|418131364|ref|ZP_12768244.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|418188194|ref|ZP_12824712.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|418231032|ref|ZP_12857626.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|419478855|ref|ZP_14018674.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
gi|14973705|gb|AAK76245.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|353800779|gb|EHD81088.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|353848003|gb|EHE28022.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|353884342|gb|EHE64142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|379563127|gb|EHZ28132.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
Length = 810
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|424894877|ref|ZP_18318451.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393179104|gb|EJC79143.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|424890537|ref|ZP_18314136.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393172755|gb|EJC72800.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|424870444|ref|ZP_18294106.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393166145|gb|EJC66192.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|424914143|ref|ZP_18337507.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392850319|gb|EJB02840.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|419621021|ref|ZP_14154411.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 51494]
gi|419632815|ref|ZP_14165268.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|419647100|ref|ZP_14178541.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 53161]
gi|419672275|ref|ZP_14201854.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|419674143|ref|ZP_14203565.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 51037]
gi|419679572|ref|ZP_14208561.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 87459]
gi|380597735|gb|EIB18221.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 51494]
gi|380613720|gb|EIB33190.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|380621889|gb|EIB40665.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 53161]
gi|380646811|gb|EIB63758.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|380651576|gb|EIB68113.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 51037]
gi|380656965|gb|EIB73085.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 87459]
Length = 578
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|419618836|ref|ZP_14152362.1| ATP-dependent chaperone protein ClpB, partial [Campylobacter jejuni
subsp. jejuni 129-258]
gi|380594146|gb|EIB14953.1| ATP-dependent chaperone protein ClpB, partial [Campylobacter jejuni
subsp. jejuni 129-258]
Length = 580
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 288 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 347
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 348 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 404
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 405 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 453
>gi|417108858|ref|ZP_11962961.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CNPAF512]
gi|327189212|gb|EGE56391.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CNPAF512]
Length = 814
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 452 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 511
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 512 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 568
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 569 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 612
>gi|190891597|ref|YP_001978139.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium etli
CIAT 652]
gi|190696876|gb|ACE90961.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
Length = 829
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 627
>gi|209549171|ref|YP_002281088.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534927|gb|ACI54862.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|241204497|ref|YP_002975593.1| ATP-dependent Clp protease ATP-binding protein ClpA [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858387|gb|ACS56054.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|116251969|ref|YP_767807.1| ATP-dependent Clp protease ATP-binding subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256617|emb|CAK07705.1| putative ATP-dependent Clp protease ATP-binding subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 830
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|419698243|ref|ZP_14225963.1| ATP-dependent chaperone protein ClpB, partial [Campylobacter jejuni
subsp. jejuni LMG 23211]
gi|380675658|gb|EIB90553.1| ATP-dependent chaperone protein ClpB, partial [Campylobacter jejuni
subsp. jejuni LMG 23211]
Length = 579
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 287 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 346
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 347 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 403
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 404 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 452
>gi|270157739|ref|ZP_06186396.1| putative helicase [Legionella longbeachae D-4968]
gi|269989764|gb|EEZ96018.1| putative helicase [Legionella longbeachae D-4968]
Length = 1132
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 4 TDKFIQSSNVRVLEE---QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
T K Q++ V L + ++K H GQ +A SH N N +++ G P
Sbjct: 699 TGKLAQTAIVDFLGKSTPRIKGHTSGQAIAPSHEPKQRLNEIIQAVINLDNSYLTIQGPP 758
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHK 90
G GK Y +++ + KR K G S HK
Sbjct: 759 GAGKTYTGKHLIAELVKRGKKVGISSNSHK 788
>gi|419643517|ref|ZP_14175241.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ATCC 33560]
gi|380621246|gb|EIB40064.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ATCC 33560]
Length = 578
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|419645583|ref|ZP_14177111.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 9081]
gi|419696327|ref|ZP_14224189.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23210]
gi|380620094|gb|EIB39057.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 9081]
gi|380674626|gb|EIB89554.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23210]
Length = 578
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|344172166|emb|CCA84794.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
syzygii R24]
Length = 762
Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
S ++ LE LK V GQE AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQEPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 70 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E+MN
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-EMMN 614
>gi|419652794|ref|ZP_14183850.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|419670223|ref|ZP_14199961.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-11]
gi|419683721|ref|ZP_14212402.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1213]
gi|380627982|gb|EIB46327.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|380645162|gb|EIB62235.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-11]
gi|380657812|gb|EIB73861.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1213]
Length = 578
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|317051276|ref|YP_004112392.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurispirillum indicum S5]
gi|316946360|gb|ADU65836.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfurispirillum indicum S5]
Length = 747
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 4 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GT 62
T + +R LEE + + + GQ AI+ + ++K + K + L P G
Sbjct: 443 TATLSEKQRLRTLEEDMLRRIFGQGNAITQLSRSIKRSRAGLGNPRKPMGSFLFTGPTGV 502
Query: 63 GKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTAC 121
GK V+ + + ++ S ++ K +R+ +V + L I C
Sbjct: 503 GKTEVSRQLAELLGVHFQRFDMSEYMEKHAVARLIGSPPGYVGFEQGGLLTETIRRHPHC 562
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMN-- 175
+ + DEV+K + ++++++ +DH + + F+N I + SN G TE +
Sbjct: 563 ---VLLLDEVEKAHQDIMNILLQVMDHATLTDNTGATADFRNVILIMTSNCGVTEPASLG 619
Query: 176 --TFLELRKSECIEFIF 190
+ L+ R ++ +E F
Sbjct: 620 FGSSLQPRAADAVERFF 636
>gi|225551112|ref|ZP_03772058.1| chaperone ClpB [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|225378927|gb|EEH01292.1| chaperone ClpB [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
Length = 704
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 174
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 526 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 585
Query: 175 NTFLELRKS 183
N +EL+K+
Sbjct: 586 NALMELQKT 594
>gi|325298216|ref|YP_004258133.1| ATPase AAA-2 domain-containing protein [Bacteroides salanitronis
DSM 18170]
gi|324317769|gb|ADY35660.1| ATPase AAA-2 domain protein [Bacteroides salanitronis DSM 18170]
Length = 826
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRY-HNTKALAIS---LHGLPGTGKNYVTDFI 71
+EE L++ V GQ+ A+ + A+ ++R N I L G GTGK + +
Sbjct: 529 MEEYLRRRVVGQDRALKTLTDAI---LESRSGMNKPGQPIGSFFLLGPTGTGKTELAKAL 585
Query: 72 VSSIFKRYKDK---GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
++F K S F + ++ + + Y + +++ + A+ +F
Sbjct: 586 AETLFNDEKSMIRFDMSEFKEEHSAALLYGAPPGYVGY--EEGGMLVNKIRQQPYAVVLF 643
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYNQIS----FQNTIFLFLSNSG 169
DE++K + D+ + +D +++++ F N+I LF SN G
Sbjct: 644 DEIEKAHPSVYDIFLQIMDEGKLHDRLGKEGDFSNSIILFTSNVG 688
>gi|223940419|ref|ZP_03632272.1| ATPase AAA-2 domain protein [bacterium Ellin514]
gi|223890914|gb|EEF57422.1| ATPase AAA-2 domain protein [bacterium Ellin514]
Length = 835
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA-ISLHGLPGTGKNYVTDFIVSS 74
+E+Q+ + V GQ A+S +C AL+ + + + +L G G GK + +
Sbjct: 522 VEDQMSKVVIGQREAVSAMCKALRRSRADLKDPKRPIGTFALLGPTGVGKTLLAKTLAEQ 581
Query: 75 IF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 129
+F K S ++ KFN SR+ +V QLT V ++ +FD
Sbjct: 582 MFGDSKSLIQLDMSEYMEKFNVSRLVGSPPGYVGYEEGGQLT----EQVRRKPYSVVLFD 637
Query: 130 EVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEI 173
E++K + ++++ ++ +V ++F+NTI L SN G I
Sbjct: 638 EIEKAHPDVWNMLLQILEEGKLTDSVGRVVNFRNTIILMTSNVGSETI 685
>gi|171920854|ref|ZP_02932019.1| chaperone ClpB [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|188024102|ref|ZP_02996842.1| chaperone ClpB [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518236|ref|ZP_03003770.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|188524403|ref|ZP_03004425.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867858|ref|ZP_03079857.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273810|ref|ZP_03206344.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554597|ref|YP_002284827.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225550792|ref|ZP_03771741.1| chaperone ClpB [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|171903058|gb|EDT49347.1| chaperone ClpB [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|188019151|gb|EDU57191.1| chaperone ClpB [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188998013|gb|EDU67110.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|195659991|gb|EDX53371.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660435|gb|EDX53693.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249565|gb|EDY74347.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209542098|gb|ACI60327.1| chaperone protein ClpB [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225379946|gb|EEH02308.1| chaperone ClpB [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 704
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIM----- 174
+I +FDE++K +L++++ +D +V N+I+F+NTI + SN G ++
Sbjct: 526 SILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNKT 585
Query: 175 NTFLELRKS 183
N +EL+K+
Sbjct: 586 NALMELQKT 594
>gi|365920722|ref|ZP_09445044.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Cardiobacterium valvarum F0432]
gi|364577705|gb|EHM54959.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Cardiobacterium valvarum F0432]
Length = 761
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
+ ++ LE LK V GQ+ AI H+ A+K N K + L P G GK V
Sbjct: 444 NQLKTLERDLKTVVFGQDDAIEHLAAAIKLSRAGLRDNEKPIGSFLFTGPTGVGKTEVCR 503
Query: 70 FIVSSIFKRYKDKGTSRFV--HKFNSRIHFP----NENHVSLYRLQLTNWIISNVTACDR 123
+ + + S ++ H + I P L LTN I N
Sbjct: 504 QLAHVLGIKLLRFDMSEYMEAHTVSRLIGAPPGYVGHEQAGL----LTNQIQKN----PH 555
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
A+ + DE++K ++++++ +DH V + +I+ +N I + SN G E+
Sbjct: 556 AVLLLDEIEKAHPDIMNLLLQIMDHGMVTDATGREINCRNLILILTSNVGAFEM 609
>gi|223040429|ref|ZP_03610703.1| chaperone protein ClpB [Campylobacter rectus RM3267]
gi|222878279|gb|EEF13386.1| chaperone protein ClpB [Campylobacter rectus RM3267]
Length = 718
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVT 68
++N++ L ++LK + GQ+ A+ + A+K + + NT G G GK+ ++
Sbjct: 419 TANLKNLAQKLKSEIFGQDEAVDTLVAAIKRSYAGLKQPNTPVGVFLFTGPSGVGKSELS 478
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDRAIF 126
+ ++ ++ S ++ K + SR+ +V I++N V ++
Sbjct: 479 AALARNLGVHFERFDMSEYMEKHSVSRLIGAPPGYVGFEE----GGILTNAVKKHPYSVI 534
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTE 172
+FDE++K +++V + D+ ++ + F+N + + SN G E
Sbjct: 535 LFDEIEKADDDMINVFLQIFDNASLTDNTGAKSDFRNAVIIMSSNLGSKE 584
>gi|442760143|gb|JAA72230.1| Hypothetical protein [Ixodes ricinus]
Length = 609
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 25/185 (13%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+++KQ + GQE AI+ + ++ + + L G G GK + + +
Sbjct: 249 LEQRVKQVIVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQLAEYL 308
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL--------------QLTNWIISNVTAC 121
+ KGT + + + + E H + +L QLT + C
Sbjct: 309 HGDKRGKGTKKGFIRLDMSEY--QEKH-EVAKLIGSPPGYVGHDDGGQLTR----RLREC 361
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 177
A+ + DEVDK +L V++ D + + I ++ IF+ SN EI
Sbjct: 362 PTAVVLLDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIVCKDAIFVMTSNLASDEIAQHA 421
Query: 178 LELRK 182
ELR+
Sbjct: 422 TELRR 426
>gi|419661051|ref|ZP_14191390.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-979]
gi|380633267|gb|EIB51249.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 2008-979]
Length = 578
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|241120636|ref|XP_002402954.1| suppressor of potassium transport defect, putative [Ixodes
scapularis]
gi|215493368|gb|EEC03009.1| suppressor of potassium transport defect, putative [Ixodes
scapularis]
Length = 609
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 25/185 (13%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE+++KQ + GQE AI+ + ++ + + L G G GK + + +
Sbjct: 249 LEQRVKQVIVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQLAEYL 308
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL--------------QLTNWIISNVTAC 121
+ KGT + + + + E H + +L QLT + C
Sbjct: 309 HGDKRGKGTKKGFIRLDMSEY--QEKH-EVAKLIGSPPGYVGHDDGGQLTR----RLREC 361
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTF 177
A+ + DEVDK +L V++ D + + I ++ IF+ SN EI
Sbjct: 362 PTAVVLLDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIVCKDAIFVMTSNLASDEIAQHA 421
Query: 178 LELRK 182
ELR+
Sbjct: 422 TELRR 426
>gi|419626220|ref|ZP_14159214.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23223]
gi|380603506|gb|EIB23597.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23223]
Length = 578
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|15888690|ref|NP_354371.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|15156428|gb|AAK87156.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
Length = 836
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|424910221|ref|ZP_18333598.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846252|gb|EJA98774.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 835
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|418406879|ref|ZP_12980198.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens 5A]
gi|358007372|gb|EHJ99695.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens 5A]
Length = 838
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|418296177|ref|ZP_12908021.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539609|gb|EHH08847.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
tumefaciens CCNWGS0286]
Length = 835
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|417860181|ref|ZP_12505237.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|338823245|gb|EGP57213.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
Length = 838
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|335034989|ref|ZP_08528332.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
gi|333793420|gb|EGL64774.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
Length = 836
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|325292724|ref|YP_004278588.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Agrobacterium
sp. H13-3]
gi|325060577|gb|ADY64268.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Agrobacterium
sp. H13-3]
Length = 838
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 469 LEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 528
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 529 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 585
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 586 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 632
>gi|262341344|ref|YP_003284199.1| ATP-dependent Clp protease, ATP-binding subunit [Blattabacterium
sp. (Blattella germanica) str. Bge]
gi|262272681|gb|ACY40589.1| ATP-dependent Clp protease, ATP-binding subunit [Blattabacterium
sp. (Blattella germanica) str. Bge]
Length = 704
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 20 LKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 78
LK+ + GQ+ A+ I A+ +N + N+ + G G GK Y+ +F
Sbjct: 400 LKEKIIGQDEAVEKIVKAVQRNRTGLKDPNSPIGSFIFLGQTGVGKTYLAKIFAKELFDS 459
Query: 79 YKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ KF+ SR+ +V QLT I ++ + DE++K
Sbjct: 460 EESLIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEII----RRKPYSVILLDEIEK 515
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ ++++ +D+ V + +I+F+NT+ +F SN+G
Sbjct: 516 AHHEVFNILLQMLDYGCVTDSIGRKINFKNTVIIFTSNTG 555
>gi|395781529|ref|ZP_10461947.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
rattimassiliensis 15908]
gi|395420962|gb|EJF87220.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
rattimassiliensis 15908]
Length = 783
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK ++GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVIYGQDQAISVLVSSIKLSRAGLREPDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ + S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIKLLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLEL----RKSEC 185
LL++++ +D+ + + +I F+N I + +N+G +++ + + R SE
Sbjct: 574 AHPELLNILLQIMDYGRLTDNNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKIQRDSED 633
Query: 186 IEFI 189
+E I
Sbjct: 634 VEAI 637
>gi|419668222|ref|ZP_14198139.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-10]
gi|380644601|gb|EIB61781.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-10]
Length = 578
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|224024704|ref|ZP_03643070.1| hypothetical protein BACCOPRO_01432, partial [Bacteroides
coprophilus DSM 18228]
gi|224017926|gb|EEF75938.1| hypothetical protein BACCOPRO_01432 [Bacteroides coprophilus DSM
18228]
Length = 731
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
+E +L++ V GQ+ AIS + A+ K + + G GTGK +T +
Sbjct: 435 IESKLRERVKGQDKAISTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAEL 494
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDRAIF 126
+F + RF F E+ +L ++ ++ + ++
Sbjct: 495 LFD--NESAMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTQIRQKPYSVV 547
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQIS----FQNTIFLFLSNSGGTEIMN 175
+FDE++K + DV + +D +++++ F N+I +F SN G I++
Sbjct: 548 LFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSNIGSQWIVD 600
>gi|206889441|ref|YP_002248100.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741379|gb|ACI20436.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 816
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYV 67
+S + +EE L Q + GQ+ AI +C A++ + N + G G GK +
Sbjct: 496 ESEKLLQMEEILHQRIVGQDEAIKSVCKAIRRSRAGLKTKNRPIGSFFFLGPTGVGKTEL 555
Query: 68 TDFIVSSIFKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
+ +F S ++ KFN S++ +V QLT I
Sbjct: 556 AKVLAEFMFNDENALIKFDMSEYMEKFNVSKLIGAPPGYVGYEEGGQLTEKIRKR----P 611
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI-MNTF 177
++ +FDE++K + ++++ +D + + ++ F+NTI + SN G I +T
Sbjct: 612 YSVVLFDEIEKAHPDVFNLLLQILDEGVLTDSFGRKVDFRNTIIIMTSNIGARLIEKSTP 671
Query: 178 LELRKSECIE 187
L RKS+ ++
Sbjct: 672 LGFRKSDSVD 681
>gi|409400667|ref|ZP_11250672.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidocella sp.
MX-AZ02]
gi|409130395|gb|EKN00165.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Acidocella sp.
MX-AZ02]
Length = 780
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 458 LRHLERDLKGMVFGQDAAIEALSAAMKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVARQL 517
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + + I C + + DE
Sbjct: 518 ASTLGIELTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGMLTDAIDQHPHC---VLLLDE 574
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 575 IEKAHPDLFNILLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADM 621
>gi|419649294|ref|ZP_14180565.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 9217]
gi|380624567|gb|EIB43213.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 9217]
Length = 578
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNTDNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|145526785|ref|XP_001449198.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416775|emb|CAK81801.1| unnamed protein product [Paramecium tetraurelia]
Length = 716
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 426 DIQFAKDVLDKEIEGLEKVKERIIEMISVNKLKNAGSKAKGFILLLNGPPGTGKTSIAKS 485
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 126
I S+ K TSRF+ + + P + H Y + I + + +F
Sbjct: 486 IAKSL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 537
Query: 127 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSN 167
I DE+DK K LL+++ P F DH+ + + F + IF+ SN
Sbjct: 538 ILDELDKVSKHHSGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSHVIFILTSN 592
>gi|350400658|ref|XP_003485912.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
impatiens]
Length = 643
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E +K ++ LE++L+Q++ GQ AIS + ++ L G
Sbjct: 277 EIMKEKELEERRRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 336
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNW 113
G GK + + + I K K +G R H+ I P QLT
Sbjct: 337 GIGKTELAKQLAAYIHKN-KQEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKL 395
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ C A+ +FDEVDK +L V++ D + + I +N IF+ SN
Sbjct: 396 L----RKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLA 451
Query: 170 GTEIMNTFLELRKS 183
I + + LR+
Sbjct: 452 SEVIADHAVHLREE 465
>gi|417677915|ref|ZP_12327318.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|418156168|ref|ZP_12792889.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|418226569|ref|ZP_12853193.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
gi|332071276|gb|EGI81771.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|353818357|gb|EHD98556.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|353879209|gb|EHE59036.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
Length = 810
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 171
FDEV+K + +V++ +D + + ++ F NTI + SN G T
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGAT 667
>gi|226483493|emb|CAX74047.1| ClpB caseinolytic peptidase B homolog [Schistosoma japonicum]
Length = 597
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +L++ + GQE AI + A++ Y L G G GK + + + +
Sbjct: 244 LESRLRKVIVGQEAAILTVSAAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVAAYL 303
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K K D + H+ + I P QLT + C A+ +FD
Sbjct: 304 HKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEGGQLTR----ALATCPNAVVLFD 359
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K +L ++ D + + I+ ++ IF+ SN G I +LR S
Sbjct: 360 ETEKAHPDVLTALLQLFDEGRLTDGRGATINCKDAIFIMTSNVGSQVIAEHAQDLRHS 417
>gi|149007762|ref|ZP_01831371.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|418113531|ref|ZP_12750527.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|419467871|ref|ZP_14007749.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|419513586|ref|ZP_14053216.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|419517799|ref|ZP_14057411.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|421284339|ref|ZP_15735121.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
gi|147760757|gb|EDK67729.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|353781742|gb|EHD62183.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|379542293|gb|EHZ07451.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|379632873|gb|EHZ97443.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|379637449|gb|EIA02005.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|395879353|gb|EJG90413.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
Length = 810
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 171
FDEV+K + +V++ +D + + ++ F NTI + SN G T
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGAT 667
>gi|296446321|ref|ZP_06888267.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylosinus
trichosporium OB3b]
gi|296256222|gb|EFH03303.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylosinus
trichosporium OB3b]
Length = 820
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+E LK+ V+GQ+ A++ + A+K K + L P G GK + +S
Sbjct: 466 LDETLKRVVYGQDKAVTALTSAIKLARAGLRDPEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDSIDQHPHC---VLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +DH + + QI F+N I + +N+G ++ T
Sbjct: 583 AHSDLYNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGAADLART 629
>gi|424918228|ref|ZP_18341592.1| type VI secretion ATPase, ClpV1 family [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854404|gb|EJB06925.1| type VI secretion ATPase, ClpV1 family [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 920
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
Q V+ L+ +LK+ V GQE AI I A++ + A+ L G+ GTGK
Sbjct: 574 QIETVKTLDIRLKERVLGQEAAIERIASAMRAARAGLSDPRRPPAVFLLVGMSGTGKTET 633
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY--------RLQLTNWIISNVT 119
+ ++ G SR++ N F E+ +S+ + V
Sbjct: 634 ALSLADMLY------GGSRYLTTINMS-EFKEEHKISMLLGSPPGYVGYGEGGVLTEAVR 686
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ + DE+DK G+ ++ D + + I F+NT + +N+G I
Sbjct: 687 RRPYGVLLLDEIDKAHPGVQEIFYQVFDKGTLRDGEGRDIDFKNTTIVMTANTGSEMI 744
>gi|402773715|ref|YP_006593252.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Methylocystis
sp. SC2]
gi|401775735|emb|CCJ08601.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Methylocystis
sp. SC2]
Length = 811
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+E L++ V+GQ+ AIS + A+K K + L P G GK + +S
Sbjct: 466 LDETLRRVVYGQDKAISALTSAIKLARAGLRDQEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAIDQHPHC---VLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT---FLELRK---- 182
L ++++ +DH + + I F+N I + +N+G ++ T F R+
Sbjct: 583 AHPDLYNILLQVMDHGKLTDHNGKTIDFRNVILIMTTNAGAQDLARTPIGFTRTRRDLDD 642
Query: 183 SECIEFIF 190
SE I +F
Sbjct: 643 SEAINRLF 650
>gi|398353379|ref|YP_006398843.1| ClpA protein [Sinorhizobium fredii USDA 257]
gi|390128705|gb|AFL52086.1| ClpA protein [Sinorhizobium fredii USDA 257]
Length = 829
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L+ V+GQ+LAI + ++K K + + P G GK V + +S
Sbjct: 466 LEKELRSVVYGQDLAIEALASSIKLARAGLREPNKPIGCYVFTGPTGVGKTEVAKQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH ++ + +I F+N I + +N+G +++
Sbjct: 583 AHPDLFNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASDM 626
>gi|319946100|ref|ZP_08020348.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|417919257|ref|ZP_12562792.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
gi|319747746|gb|EFV99991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|342833947|gb|EGU68226.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
Length = 809
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 505 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKALAEV 564
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 668
>gi|395791063|ref|ZP_10470521.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
alsatica IBS 382]
gi|395408426|gb|EJF75036.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
alsatica IBS 382]
Length = 787
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++LK ++GQ+ AI+ + ++K + K + L P G GK V + SS
Sbjct: 457 LEKELKHVIYGQDQAITSLVSSIKLARAGLRESEKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 I--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAI 125
+ Y ++ T +R + I F LT+ + N AI
Sbjct: 517 LGVELLRFDMSEYMERHTVARLIGAPPGYIGFDQGG-------LLTDAVDQN----PHAI 565
Query: 126 FIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
+ DE++K L ++++ +D+ + + +I F+N I + +N+G +++ + +
Sbjct: 566 LLLDEIEKAHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSVIGFS 625
Query: 182 K 182
K
Sbjct: 626 K 626
>gi|321475126|gb|EFX86089.1| hypothetical protein DAPPUDRAFT_313073 [Daphnia pulex]
Length = 587
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 16/177 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +LK+ + GQE AI+ + A++ L G G GK + VS+
Sbjct: 223 LELRLKEKIIGQEAAIATVASAIRRKEGGWIDEEHPLVFLFLGSSGIGKTELAK-QVSNY 281
Query: 76 FKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIF 128
+G R H+ I P + + + C A+ +
Sbjct: 282 LNPKSSEGFIRLDMSEYQNKHEVAKLIGSP----PGYVGYEEGGQLTKKLKKCPNAVVLL 337
Query: 129 DEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
DEVDK +L V++ D + + I ++ IF+ SN EI + L+LR
Sbjct: 338 DEVDKAHPDVLTVLLQLFDEGRITDGRGKTIFCKDAIFIMTSNLANDEIADHALQLR 394
>gi|402487545|ref|ZP_10834363.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CCGE 510]
gi|401813414|gb|EJT05758.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CCGE 510]
Length = 830
Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEKELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|424881404|ref|ZP_18305036.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392517767|gb|EIW42499.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 830
Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + SS
Sbjct: 468 LEKELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLASS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|154148486|ref|YP_001406413.1| chaperone ClpB [Campylobacter hominis ATCC BAA-381]
gi|153804495|gb|ABS51502.1| chaperone ClpB [Campylobacter hominis ATCC BAA-381]
Length = 858
Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E LK+ V GQ++A+ I A+K + + + L G G GK +
Sbjct: 565 IENHLKESVVGQDMALGAIAKAVKRNRAGLNSENRPIGSFLFLGPTGVGKTESAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+F K S ++ K N SR+ +V QLT V ++ +FD
Sbjct: 625 LFDDEKALIRFDMSEYMEKINVSRLLGAAPGYVGYEEGGQLT----EAVRRKPYSVLLFD 680
Query: 130 EVDKFPKGLLDVIIPFIDH-HAVYNQ---ISFQNTIFLFLSNSGGTEIMN 175
E++K K + ++++ +D A N+ + F+NTI + SN G IMN
Sbjct: 681 EIEKAHKDVFNILLGILDDGRATDNKGVTVDFKNTIIILTSNIGSDIIMN 730
>gi|419630429|ref|ZP_14163109.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 60004]
gi|419639184|ref|ZP_14171219.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 86605]
gi|380605119|gb|EIB25101.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 60004]
gi|380616870|gb|EIB36057.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 86605]
Length = 578
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALSRAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 451
>gi|418975472|ref|ZP_13523376.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
gi|383347455|gb|EID25433.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
Length = 810
Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNILLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|294084617|ref|YP_003551375.1| ATPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664190|gb|ADE39291.1| ATPase with chaperone activity, ATP-binding subunit [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 764
Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AIS + A+K K + L P G GK V + +
Sbjct: 450 LEDDLKRLVFGQDAAISALSSAIKLSRAGLREVEKPVGNYLFSGPTGVGKTEVARQLAEA 509
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ + S ++ + SR+ +V + L + V A+ + DE++K
Sbjct: 510 LGIKLIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDAVDQTPHAVLLLDEIEK 566
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + + F+N I + +N+G E+
Sbjct: 567 AHPDLFNILLQVMDHGKLTDNNGKSVDFRNVILIMTTNAGAQEL 610
>gi|383937727|ref|ZP_09990969.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
gi|418973172|ref|ZP_13521195.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383350169|gb|EID28063.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715378|gb|EID71342.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
Length = 810
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|342164860|ref|YP_004769499.1| ATPase [Streptococcus pseudopneumoniae IS7493]
gi|341934742|gb|AEL11639.1| ATPase [Streptococcus pseudopneumoniae IS7493]
Length = 810
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|307710307|ref|ZP_07646748.1| clpC [Streptococcus mitis SK564]
gi|307618899|gb|EFN98034.1| clpC [Streptococcus mitis SK564]
Length = 810
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S + A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|388456892|ref|ZP_10139187.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Fluoribacter
dumoffii Tex-KL]
Length = 754
Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 451 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLRDPQKPVGCFLFAGPTGVGKTEVTRQL 510
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 511 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 567
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G E++
Sbjct: 568 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGAGELV 615
>gi|145500508|ref|XP_001436237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403376|emb|CAK68840.1| unnamed protein product [Paramecium tetraurelia]
Length = 946
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 418 DIQFAKDVLDKEIEGLEKVKERIVEMISVNKLKNAGEKAKGFILLLNGPPGTGKTSIAKS 477
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 126
I ++ K TSRF+ + + P + H Y + I + + +F
Sbjct: 478 IAKAL------KRTSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 529
Query: 127 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSN 167
I DE+DK K LL+++ P F DH+ + + F + IF+ SN
Sbjct: 530 ILDELDKVSKHHSGGADPYYTLLEILNPEENHNFTDHYMDIS-VDFSHVIFILTSN 584
>gi|417850359|ref|ZP_12496268.1| chaperone protein ClpB [Streptococcus mitis SK1080]
gi|339452754|gb|EGP65376.1| chaperone protein ClpB [Streptococcus mitis SK1080]
Length = 810
Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ A+S I A++ N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQNQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|10442010|gb|AAG17282.1|AF254897_1 ClpA-like protein [Bradyrhizobium japonicum USDA 110]
Length = 802
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|386402343|ref|ZP_10087121.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM1253]
gi|385742969|gb|EIG63165.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM1253]
Length = 801
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|383771310|ref|YP_005450375.1| ClpA-like protein [Bradyrhizobium sp. S23321]
gi|381359433|dbj|BAL76263.1| ClpA-like protein [Bradyrhizobium sp. S23321]
Length = 799
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|419688369|ref|ZP_14216693.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1854]
gi|380665640|gb|EIB81204.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1854]
Length = 578
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMN 451
>gi|374576052|ref|ZP_09649148.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM471]
gi|374424373|gb|EHR03906.1| ATP-dependent Clp protease ATP-binding subunit clpA [Bradyrhizobium
sp. WSM471]
Length = 801
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|384218246|ref|YP_005609412.1| hypothetical protein BJ6T_45570 [Bradyrhizobium japonicum USDA 6]
gi|354957145|dbj|BAL09824.1| hypothetical protein BJ6T_45570 [Bradyrhizobium japonicum USDA 6]
Length = 804
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|27380264|ref|NP_771793.1| ClpA-like protein [Bradyrhizobium japonicum USDA 110]
gi|27353428|dbj|BAC50418.1| ClpA-like protein [Bradyrhizobium japonicum USDA 110]
Length = 802
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + +S
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGASDLAKQAFGFTRSK 631
>gi|123968171|ref|YP_001009029.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. AS9601]
gi|123198281|gb|ABM69922.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. AS9601]
Length = 860
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE LK+ + GQ+ AI + ++K +K LA L G G GK ++
Sbjct: 565 LESILKEKIIGQDSAIRAVADSIKRSRTGLNDPSKPLASFLFLGPTGVGKTELSKVTAKI 624
Query: 75 IFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
IF S ++ K + S+I ++ QLT + N + + + D
Sbjct: 625 IFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGGQLTEAVRKNPYS----LILLD 680
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSEC 185
E++K K +LD+++ +D + + I+F+N+I + SN G I + L +RK +
Sbjct: 681 EIEKAHKDILDILLQVLDDGIITDGQGRTINFKNSIIVLTSNLGSQSIND--LSVRKEDA 738
Query: 186 IEF 188
E
Sbjct: 739 NEI 741
>gi|419649410|ref|ZP_14180649.1| ATP-dependent Clp protease ATP-binding subunit, partial
[Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380630218|gb|EIB48460.1| ATP-dependent Clp protease ATP-binding subunit, partial
[Campylobacter jejuni subsp. jejuni 2008-1025]
Length = 579
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 287 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 346
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 347 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 403
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN IMN
Sbjct: 404 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMN 452
>gi|300690671|ref|YP_003751666.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum PSI07]
gi|299077731|emb|CBJ50369.2| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum PSI07]
gi|344170275|emb|CCA82674.1| ATP-dependent Clp protease ATP-binding subunit clpA [blood disease
bacterium R229]
Length = 762
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
S ++ LE LK V GQE AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQEPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 70 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMN 614
>gi|419624551|ref|ZP_14157650.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|419632520|ref|ZP_14165048.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|419637992|ref|ZP_14170125.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|419656837|ref|ZP_14187590.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|419662611|ref|ZP_14192889.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|419664502|ref|ZP_14194642.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|419675971|ref|ZP_14205223.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|419677120|ref|ZP_14206277.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|419684530|ref|ZP_14213126.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|419691280|ref|ZP_14219434.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|419692679|ref|ZP_14220759.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1928]
gi|380598245|gb|EIB18667.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|380608680|gb|EIB28447.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|380614467|gb|EIB33847.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|380633236|gb|EIB51226.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|380637696|gb|EIB55309.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|380640890|gb|EIB58327.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|380651002|gb|EIB67594.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|380654934|gb|EIB71269.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|380666899|gb|EIB82397.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|380666961|gb|EIB82449.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|380669035|gb|EIB84334.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1928]
Length = 578
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 286 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 345
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 346 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 402
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN IMN
Sbjct: 403 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMN 451
>gi|390333832|ref|XP_003723787.1| PREDICTED: uncharacterized protein LOC100892342 [Strongylocentrotus
purpuratus]
Length = 609
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ L+ HV+GQ + +S + L + + + + HG G GK +V + I +
Sbjct: 314 LQTILQSHVYGQPIVVSLLPQLLSGILAEDVSD-RTMVLMFHGQSGVGKTFVAELIGKKM 372
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLT-----NWIISNVTACDRAIFIFDE 130
F ++ S+ VHKF + V+ Y + + SN C ++I ++
Sbjct: 373 F---PEQAQSQCVHKFLPSFLEVRDRLVTTYDYSIAFEDFIDQGKSNYRTCPVGLYIIED 429
Query: 131 VD-KFPKGLLDVI---IPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFL 178
+D + LL+ I +P I + Q IF ++N G + + L
Sbjct: 430 LDYESSSSLLEAIAFTLPSIRKRQAAQE---QKMIFFLMTNLQGEALGHYLL 478
>gi|323138621|ref|ZP_08073688.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylocystis
sp. ATCC 49242]
gi|322396109|gb|EFX98643.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylocystis
sp. ATCC 49242]
Length = 813
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+E L++ V+GQ+ AIS + A+K K + L P G GK + +S
Sbjct: 466 LDETLRRVVYGQDKAISALTSAIKLARAGLRDQEKPIGCYLFSGPTGVGKTEAARQLATS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 526 LGIELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDSIDQHPHC---VLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFL-------ELRK 182
L ++++ +DH + + I F+N I + +N+G ++ T + +L
Sbjct: 583 AHPDLYNILLQVMDHGKLTDHNGKTIDFRNVILIMTTNAGAQDLARTPIGFTRTRADLDD 642
Query: 183 SECIEFIF 190
SE I +F
Sbjct: 643 SEAINRLF 650
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
+S ++ LE+ L Q V GQ A+ + A+K + + + G G GK +
Sbjct: 499 ESEKLKKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKDPRRPIGSFMFLGPTGVGKTEL 558
Query: 68 TDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDR 123
+ + +F D S ++ K++ S++ +V + V
Sbjct: 559 SKALAELMFGSENDLIRVDMSEYMEKYSVSKMIGSPPGYVGY---DEGGQLSEKVRRRPY 615
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
++ +FDE++K +L++++ +D + + +ISF+NTI + SN+G I+N
Sbjct: 616 SVVLFDEIEKAHPDVLNILLQVLDDGHITDAQGRKISFKNTIIIMTSNAGAESIVN 671
>gi|270159872|ref|ZP_06188528.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae D-4968]
gi|289165374|ref|YP_003455512.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae NSW150]
gi|269988211|gb|EEZ94466.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae D-4968]
gi|288858547|emb|CBJ12428.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Legionella
longbeachae NSW150]
Length = 754
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI+ + A+K K + L P G GK VT +
Sbjct: 451 LRNLERDLKLLVYGQDQAITALASAIKLGRSGLRDPQKPVGCFLFAGPTGVGKTEVTRQL 510
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ + S ++ K SR+ +V + L + VT A+ + DE
Sbjct: 511 ANVLGIELLRFDMSEYMEKHTVSRLIGAPPGYVGYDQGGL---LTEAVTKNPHAVLLLDE 567
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
++K + ++++ +DH + + Q F++ I + SN+G E++
Sbjct: 568 IEKAHPDVFNLLLQIMDHGTLTDTNGRQADFRHIILVMTSNAGAGEMV 615
>gi|331086971|ref|ZP_08336046.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409421|gb|EGG88864.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 814
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYV 67
+S+ +R LE+ L++ V GQE A++ + A+K + N + G G GK +
Sbjct: 497 ESARLRKLEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRPIGSFLFLGPTGVGKTEL 556
Query: 68 TDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+ + ++F + D H + I P QL+ + N
Sbjct: 557 SKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRN----P 612
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
A+ +FDE++K + ++++ +D + + +I F+NT+ + SN+G I+
Sbjct: 613 YAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNTVIIMTSNAGAKAIV 668
>gi|325663437|ref|ZP_08151847.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470336|gb|EGC73567.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 814
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYV 67
+S+ +R LE+ L++ V GQE A++ + A+K + N + G G GK +
Sbjct: 497 ESARLRKLEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRPIGSFLFLGPTGVGKTEL 556
Query: 68 TDFIVSSIFKRYK-----DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+ + ++F + D H + I P QL+ + N
Sbjct: 557 SKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRN----P 612
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
A+ +FDE++K + ++++ +D + + +I F+NT+ + SN+G I+
Sbjct: 613 YAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNTVIIMTSNAGAKAIV 668
>gi|114569836|ref|YP_756516.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Maricaulis
maris MCS10]
gi|114340298|gb|ABI65578.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Maricaulis
maris MCS10]
Length = 770
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDF 70
++R LE +LK V GQ+ AIS + A+K K + L P G GK VT
Sbjct: 451 SLRNLETELKHVVFGQDEAISQLSTAIKLSRAGLREPNKPIGCYLFSGPTGVGKTEVTKQ 510
Query: 71 IVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ ++ + S ++ + SR+ +V + L I C + + D
Sbjct: 511 LADTMGVELQRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLD 567
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
E++K L ++++ +D+ + + ++ F+N I + +N+G ++
Sbjct: 568 EIEKAHPDLFNILLQVMDNGTLTDTNGKKVDFRNVILVMTTNAGASD 614
>gi|357028499|ref|ZP_09090533.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
amorphae CCNWGS0123]
gi|355538476|gb|EHH07721.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
amorphae CCNWGS0123]
Length = 822
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|433775265|ref|YP_007305732.1| ATP-dependent Clp protease ATP-binding subunit clpA [Mesorhizobium
australicum WSM2073]
gi|433667280|gb|AGB46356.1| ATP-dependent Clp protease ATP-binding subunit clpA [Mesorhizobium
australicum WSM2073]
Length = 822
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|319783683|ref|YP_004143159.1| ATP-dependent Clp protease ATP-binding protein ClpA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169571|gb|ADV13109.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 822
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|337268713|ref|YP_004612768.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
opportunistum WSM2075]
gi|336029023|gb|AEH88674.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Mesorhizobium
opportunistum WSM2075]
Length = 822
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|157412997|ref|YP_001483863.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9215]
gi|157387572|gb|ABV50277.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9215]
Length = 860
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 30/190 (15%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE LK+ + GQ+ AI + ++K +K LA L G G GK ++
Sbjct: 565 LESILKEKIIGQDSAIRAVADSIKRSRTGLNDPSKPLASFLFLGPTGVGKTELSKVTAKI 624
Query: 75 IF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
IF Y +K S+ + + F + QLT + N +
Sbjct: 625 IFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGG-------QLTEAVRKNPYS-- 675
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
+ + DE++K K +LD+++ +D + + I+F+N+I + SN G I + L
Sbjct: 676 --LILLDEIEKAHKDILDILLQVLDDGIITDGQGRTINFKNSIIVLTSNLGSQSIND--L 731
Query: 179 ELRKSECIEF 188
+RK + E
Sbjct: 732 SVRKEDTNEI 741
>gi|13470854|ref|NP_102423.1| endopeptidase Clp ATP-binding protein subunit A [Mesorhizobium loti
MAFF303099]
gi|14021597|dbj|BAB48209.1| endopeptidase Clp ATP-binding chain A [Mesorhizobium loti
MAFF303099]
Length = 822
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +LK+ V+GQ+ AI+ + A+K K + L P G GK V + +S
Sbjct: 467 LDIELKRVVYGQDTAITALTSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
L ++++ +DH + + QI F+N I + +N+G ++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGASD 626
>gi|326802961|ref|YP_004320779.1| negative regulator of genetic competence ClpC/MecB [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651240|gb|AEA01423.1| negative regulator of genetic competence ClpC/MecB [Aerococcus
urinae ACS-120-V-Col10a]
Length = 839
Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 9 QSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKN 65
QS N R+ LE++L V GQ+ A++ + A+K + + + G G GK
Sbjct: 505 QSDNERLIHLEDRLHDRVKGQDEAVNAVARAIKRSRSGLGQRNRPIGSFMFLGPTGVGKT 564
Query: 66 YVTDFIVSSIFKRYK---DKGTSRFVHKFNSRIHFPNENHVSLYRL--QLTNWIISNVTA 120
+ ++F + S ++ K++S + Y QLT I +
Sbjct: 565 ELAKTFAETLFGSEEALIRLDMSEYMEKYSSSRMIGSAPGYVGYEEGGQLTEKIRQH--- 621
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
+I +FDE++K + D+++ +D + + + F+NT+ + SN G TE+
Sbjct: 622 -PYSIVLFDEIEKAHPDVFDLLLQVLDDGYITDSKGRMVDFRNTVVIMTSNIGATEL 677
>gi|388455547|ref|ZP_10137842.1| hypothetical protein FdumT_03178 [Fluoribacter dumoffii Tex-KL]
Length = 1132
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 19 QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 78
++K H+ GQ +A SH N N +++ G PG GK Y +++ + K+
Sbjct: 718 RIKGHMSGQAIAPSHDPNQRLNEIIEAVTNLNNSYLTIQGPPGAGKTYTGKHLIAELIKK 777
Query: 79 YKDKGTSRFVHK 90
K G S HK
Sbjct: 778 GKKIGISSNSHK 789
>gi|294678496|ref|YP_003579111.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Rhodobacter
capsulatus SB 1003]
gi|294477316|gb|ADE86704.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Rhodobacter
capsulatus SB 1003]
Length = 773
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE+ LK+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 459 LRDLEKTLKRVVFGQDKAIETLASAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQL 518
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ S ++ K SR+ +V + L + V + + DE
Sbjct: 519 ANTLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDE 575
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
++K + ++++ +DH + + Q+ F+N I + SN+G E
Sbjct: 576 IEKAHSDVFNILLQVMDHGKLTDHNGRQVDFRNVILIMTSNAGAAE 621
>gi|254525911|ref|ZP_05137963.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221537335|gb|EEE39788.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 860
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 30/190 (15%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE LK+ + GQ+ AI + ++K +K LA L G G GK ++
Sbjct: 565 LESILKEKIIGQDSAIRAVADSIKRSRTGLNDPSKPLASFLFLGPTGVGKTELSKVTAKI 624
Query: 75 IF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
IF Y +K S+ + + F + QLT + N +
Sbjct: 625 IFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGG-------QLTEAVRKNPYS-- 675
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
+ + DE++K K +LD+++ +D + + I+F+N+I + SN G I + L
Sbjct: 676 --LILLDEIEKAHKDILDILLQVLDDGIITDGQGRTINFKNSIIVLTSNLGSQSIND--L 731
Query: 179 ELRKSECIEF 188
+RK + E
Sbjct: 732 SVRKEDTNEI 741
>gi|403301548|ref|XP_003941449.1| PREDICTED: torsin-4A [Saimiri boliviensis boliviensis]
Length = 306
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A++ I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVARIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKG 83
++V + +D G
Sbjct: 201 SHVGRLLARHFRAVLEDDG 219
>gi|92117937|ref|YP_577666.1| ATPase [Nitrobacter hamburgensis X14]
gi|91800831|gb|ABE63206.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Nitrobacter
hamburgensis X14]
Length = 799
Score = 39.3 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+LAI + A+K K + L P G GK V + ++
Sbjct: 462 LEQTLKRVVFGQDLAIEALTAAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAA 521
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 MGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 578
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
+ +V++ +DH + + Q++F+N I + +N+G +++ +S+
Sbjct: 579 AHPDVYNVLLQIMDHGRLTDHHGKQVNFRNVILIMTTNAGASDMAKAAFGFTRSK 633
>gi|383458524|ref|YP_005372513.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Corallococcus
coralloides DSM 2259]
gi|380732358|gb|AFE08360.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Corallococcus
coralloides DSM 2259]
Length = 760
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
++ L+++LK ++GQ+ AI + GA+K K + L P G GK + +
Sbjct: 454 IQNLDKELKGVIYGQDKAIEEMVGAIKLSRSGLRAPEKPIGSFLFSGPTGVGKTELAKQL 513
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S+ + S + K SR+ +V + L + V A+ + DE
Sbjct: 514 AQSLGVEFLRFDMSEYSEKHTVSRLIGAPPGYVGFDQGGL---LTDAVRKHPYAVLVLDE 570
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++K L ++++ +DH + + + F+N I + +N+G E+
Sbjct: 571 IEKAHPDLFNILLQVMDHATLTDNNGRKADFRNIILILTTNAGAQEM 617
>gi|414156400|ref|ZP_11412702.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
gi|410870047|gb|EKS18006.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|419799744|ref|ZP_14325072.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
gi|385697244|gb|EIG27681.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|417918051|ref|ZP_12561604.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
gi|342829042|gb|EGU63403.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|322390400|ref|ZP_08063922.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
gi|321142911|gb|EFX38367.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|312866922|ref|ZP_07727135.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
gi|311097705|gb|EFQ55936.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|337282845|ref|YP_004622316.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|387880440|ref|YP_006310743.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
gi|335370438|gb|AEH56388.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|386793888|gb|AFJ26923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
Length = 809
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 4 TDKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLP 60
T K Q+ + L E +L + V GQ+ A+S I A++ + N + + + G
Sbjct: 491 TQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPT 550
Query: 61 GTGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNW 113
G GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGE 604
Query: 114 IISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
+ V ++ +FDEV+K + +V++ +D + + +I F NTI + SN G
Sbjct: 605 LTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLG 664
Query: 170 GTEI 173
T +
Sbjct: 665 ATAL 668
>gi|331267290|ref|YP_004326920.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
gi|326683962|emb|CBZ01580.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
Length = 810
Score = 39.3 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A+ +N R H + G G GK + +
Sbjct: 506 LEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEV 565
Query: 75 IFK------RYKDKGTSRFVHKFNS-RIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF + R++ +V + + V ++ +
Sbjct: 566 LFDDESALIRFD---MSEYMEKFAANRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 619
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 620 FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAL 669
>gi|86357528|ref|YP_469420.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|86281630|gb|ABC90693.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
Length = 829
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + +S
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 627
>gi|421589152|ref|ZP_16034339.1| ATP-dependent Clp protease, ATP-binding subunit protein, partial
[Rhizobium sp. Pop5]
gi|403705968|gb|EJZ21380.1| ATP-dependent Clp protease, ATP-binding subunit protein, partial
[Rhizobium sp. Pop5]
Length = 794
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N + G G GK V + SS
Sbjct: 467 LEQELRSVVYGQDIAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 584 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 627
>gi|414563081|ref|YP_006042042.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus ATCC 35246]
gi|338846146|gb|AEJ24358.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus ATCC 35246]
Length = 806
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 502 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 561
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 562 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 615
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 616 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 665
>gi|225869671|ref|YP_002745618.1| stress response-related Clp ATPase [Streptococcus equi subsp. equi
4047]
gi|225699075|emb|CAW92217.1| putative stress response-related Clp ATPase [Streptococcus equi
subsp. equi 4047]
Length = 813
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 509 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 568
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 622
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFNILLQVLDDGMLTDSRGCKVDFSNTIIIMTSNLGATAL 672
>gi|195977287|ref|YP_002122531.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195973992|gb|ACG61518.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 806
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 502 LEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 561
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 562 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 615
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 616 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 665
>gi|349699430|ref|ZP_08901059.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter europaeus LMG 18494]
Length = 776
Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|349685903|ref|ZP_08897045.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter oboediens 174Bp2]
Length = 776
Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|347760342|ref|YP_004867903.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579312|dbj|BAK83533.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 776
Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 457 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 516
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 517 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 573
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 574 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 620
>gi|330993781|ref|ZP_08317713.1| ClpA-like protein [Gluconacetobacter sp. SXCC-1]
gi|329759049|gb|EGG75561.1| ClpA-like protein [Gluconacetobacter sp. SXCC-1]
Length = 775
Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 456 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 515
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 516 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 572
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 573 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 619
>gi|340504263|gb|EGR30721.1| hypothetical protein IMG5_124880 [Ichthyophthirius multifiliis]
Length = 660
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
++ ++ LK+ ++G + I + N +N +K + L G PGTGK +
Sbjct: 125 DINYAQQVLKEEIYGLQKVKERIIQMIAINQIRNCQLKSKGFVLLLQGPPGTGKTSIAKT 184
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNV---------TAC 121
I ++ K SRF I F + S ++ +I S
Sbjct: 185 IAKAL------KKESRF-------ISFAGISDKSFFKGHKRTYIDSQPGIFIKELIKAQT 231
Query: 122 DRAIFIFDEVDKFPK---------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSN 167
+FI DEVDK + LL+++ P F DH+ ++ F N IF+ SN
Sbjct: 232 MNPVFILDEVDKISRSNSGADPYYSLLEILNPEENGNFQDHYLDI-KVDFSNVIFILTSN 290
Query: 168 S 168
+
Sbjct: 291 N 291
>gi|449676249|ref|XP_002157935.2| PREDICTED: caseinolytic peptidase B protein homolog [Hydra
magnipapillata]
Length = 527
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 14/177 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++ ++ + GQ+ AI + A++ + L G G GK + + +
Sbjct: 171 LEQRFREVIVGQQGAIQAVSSAIRRRQNGWVDDQHPLVFLFLGSSGIGKTELAKQLARFL 230
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K + D + H+ + I P + + + + A +A+ +FD
Sbjct: 231 HKDVEKSFIRLDMSEYQEKHEVSKLIGSPP----GYVGYEQGGQLTTKLKAFPKAVVLFD 286
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRK 182
EV+K +L V++ D + + + ++ IF+ SN EI + LELR+
Sbjct: 287 EVEKAHPDVLTVMLQLFDEGRLTDGHGKTVECKDAIFVMTSNLASEEIADHALELRQ 343
>gi|401682711|ref|ZP_10814601.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
gi|400183951|gb|EJO18198.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|399031058|ref|ZP_10731237.1| ATPase with chaperone activity, ATP-binding subunit [Flavobacterium
sp. CF136]
gi|398070734|gb|EJL62022.1| ATPase with chaperone activity, ATP-binding subunit [Flavobacterium
sp. CF136]
Length = 822
Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKA----LAISLHGLPGTGKNYVTDFI 71
+E+ L + V GQ+ I+ + G++ ++R +KA + G GTGK + +
Sbjct: 517 IEDVLSRRVIGQDHCIATVAGSI---LESRSGLSKAGQPIASFFFLGPTGTGKTELAKSL 573
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDR 123
+F+ + RF F E+ +L ++ ++ +
Sbjct: 574 AEFLFQ--DENAIIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPY 626
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS----FQNTIFLFLSNSGGTEIMNTF 177
+I +FDE++K + DV + +D +++++ F N I LF SN G I+ TF
Sbjct: 627 SIVLFDEIEKAHTSVYDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVETF 684
>gi|422880952|ref|ZP_16927408.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
gi|332365652|gb|EGJ43411.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422879819|ref|ZP_16926284.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|422929663|ref|ZP_16962604.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|422932631|ref|ZP_16965562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
gi|332365230|gb|EGJ42993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|339614467|gb|EGQ19166.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|339618382|gb|EGQ22980.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422885168|ref|ZP_16931616.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
gi|332358139|gb|EGJ35971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422872444|ref|ZP_16918937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|422877466|ref|ZP_16923936.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
gi|328944694|gb|EGG38855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|332360105|gb|EGJ37919.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422863571|ref|ZP_16910202.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
gi|327472148|gb|EGF17585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422861654|ref|ZP_16908294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
gi|327467887|gb|EGF13377.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422857455|ref|ZP_16904105.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
gi|327463506|gb|EGF09825.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422853305|ref|ZP_16899969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
gi|325697317|gb|EGD39203.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422850628|ref|ZP_16897298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
gi|325695376|gb|EGD37276.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422849964|ref|ZP_16896640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
gi|325688852|gb|EGD30860.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422847700|ref|ZP_16894383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
gi|325686698|gb|EGD28724.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422825369|ref|ZP_16873548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|422856643|ref|ZP_16903299.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|422866483|ref|ZP_16913108.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
gi|324995871|gb|EGC27782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|327460002|gb|EGF06341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|327488592|gb|EGF20392.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422824550|ref|ZP_16872737.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
gi|324992599|gb|EGC24520.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|422822606|ref|ZP_16870799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
gi|324989876|gb|EGC21819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|323350649|ref|ZP_08086310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
gi|322123069|gb|EFX94760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|125718981|ref|YP_001036114.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
sanguinis SK36]
gi|125498898|gb|ABN45564.1| ATP-dependent Clp protease, ATP-binding subunit, putative
[Streptococcus sanguinis SK36]
Length = 809
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ AIS I A++ N R + G G GK + + S
Sbjct: 505 LETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKALAES 564
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 565 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNRPYSVLL 618
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 619 FDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNLGATSL 668
>gi|125973732|ref|YP_001037642.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Clostridium
thermocellum ATCC 27405]
gi|256005534|ref|ZP_05430495.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum DSM 2360]
gi|281417889|ref|ZP_06248909.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum JW20]
gi|385778394|ref|YP_005687559.1| ATP-dependent Clp protease ATP-binding protein ClpA [Clostridium
thermocellum DSM 1313]
gi|419721298|ref|ZP_14248463.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum AD2]
gi|419724390|ref|ZP_14251456.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum YS]
gi|125713957|gb|ABN52449.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum ATCC 27405]
gi|255990514|gb|EEU00635.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum DSM 2360]
gi|281409291|gb|EFB39549.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum JW20]
gi|316940074|gb|ADU74108.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum DSM 1313]
gi|380772212|gb|EIC06066.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum YS]
gi|380782678|gb|EIC12311.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Clostridium
thermocellum AD2]
Length = 776
Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTD 69
S ++ L+ +LK + GQ+ AI + A+K N K +A L G G GK +
Sbjct: 474 SKLKNLDVKLKSTIFGQDKAIDTVVQAIKRSRAGFNENEKPVASLLFVGPTGVGKTELAK 533
Query: 70 FI---VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
+ + F R+ D + H + I P +V L I C +
Sbjct: 534 QLSLHLGIPFIRF-DMSEYQEKHTVSRLIGAP-PGYVGYEEGGLLTDAIRKTPHC---VL 588
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
+ DE++K + +V++ +D+ + + + F+N I + SN+G E+ T +
Sbjct: 589 LLDEIEKAHPDIYNVLLQVMDYAVLTDNNGKKADFRNVILIMTSNAGAREVGRTLI 644
>gi|399155722|ref|ZP_10755789.1| ATP-dependent Clp protease ATP-binding protein ClpA [SAR324 cluster
bacterium SCGC AAA001-C10]
Length = 748
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 4 TDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GT 62
TDK +R L+++L+ V GQ+ AI + A+K +H + L P G
Sbjct: 447 TDK----DKLRELKKELQMQVFGQDEAIGTLVQAIKRSRAGLHHPDHPIGSFLFTGPTGV 502
Query: 63 GKNYVTD---FIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 118
GK + FI+ F+R+ S ++ K SR+ +V + + +
Sbjct: 503 GKTELAKQLAFIMGINFERFD---MSEYMEKHTVSRLIGAPPGYVGFDQGGMLTDAVRKN 559
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
C + + DE++K + ++++ +DH + + + F+N + + SN G E+
Sbjct: 560 PHC---VVLLDEIEKAHPDIFNILLQVMDHATLTDNNGREADFRNVVLVMTSNVGAKEMG 616
Query: 175 NT 176
+T
Sbjct: 617 ST 618
>gi|427393507|ref|ZP_18887285.1| hypothetical protein HMPREF9698_01091 [Alloiococcus otitis ATCC
51267]
gi|425730508|gb|EKU93343.1| hypothetical protein HMPREF9698_01091 [Alloiococcus otitis ATCC
51267]
Length = 836
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
+S + LE+ L + V GQE A+ + A++ + + + G G GK +
Sbjct: 514 ESQRLLQLEDNLHERVVGQEEAVKAVSKAIRRARSGLKDPNRPIGSFIFLGPTGVGKTEL 573
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 122
+ +++F D S F+ K + SR+ +V QLT I +N
Sbjct: 574 AKTVAATLFGSEDDLIRIDMSEFMEKHSTSRLAGSPPGYVGYDEGGQLTEKIRNN----P 629
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ +FDEV+K + ++++ +D + + Q+ F+NT+ + +N G T +
Sbjct: 630 YSVVLFDEVEKAHPDVFNMLLQVLDDGQLTDGKGRQVDFKNTVLIMTTNIGATSL 684
>gi|379706161|ref|YP_005204620.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682860|gb|AEZ63149.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 808
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVT 68
S LE++L + V GQ+ AIS I A+ +N R + G G GK +
Sbjct: 498 SKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIRTGKRPIASFMFLGPTGVGKTELA 557
Query: 69 DFIVSSIFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTAC 121
+ +F R+ S ++ KF SR++ +V + + V
Sbjct: 558 KALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNK 611
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ +FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 612 PYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 667
>gi|171777589|ref|ZP_02919277.1| hypothetical protein STRINF_00112 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283198|gb|EDT48622.1| ATPase family associated with various cellular activities (AAA)
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
Length = 813
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVT 68
S LE++L + V GQ+ AIS I A+ +N R + G G GK +
Sbjct: 503 SKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIRTGKRPIASFMFLGPTGVGKTELA 562
Query: 69 DFIVSSIFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTAC 121
+ +F R+ S ++ KF SR++ +V + + V
Sbjct: 563 KALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNK 616
Query: 122 DRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ +FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 617 PYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 672
>gi|359792115|ref|ZP_09294938.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359251799|gb|EHK55125.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 820
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L+ +L++ V+GQ+ AIS + A+K K + L P G GK V + +S
Sbjct: 467 LDTELRRVVYGQDTAISALSSAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DEV+K
Sbjct: 527 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEVEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + I F+N I + +N+G +++
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKSIDFRNVILIMTTNAGASDM 627
>gi|313683053|ref|YP_004060791.1| ATP-dependent clp protease, ATP-binding subunit clpa [Sulfuricurvum
kujiense DSM 16994]
gi|313155913|gb|ADR34591.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Sulfuricurvum
kujiense DSM 16994]
Length = 726
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK V GQ+ A++ + A+K + K +A L P G GK + + S
Sbjct: 436 LETDLKTLVIGQDQAVAQVVKAIKRSYAGLSAAQKPIASFLFSGPTGVGKTELAKSLASE 495
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ ++ S ++ K SR+ +V + L ++ V + + DE++K
Sbjct: 496 LGIYFERFDMSEYMEKHALSRLIGAPPGYVGFEQGGL---LVETVRKHPYMVLLLDEIEK 552
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQ----NTIFLFLSNSGGTE 172
L++V++ +D + + F+ N + + SN G +E
Sbjct: 553 AHPDLINVLLQVMDSATLTDNTGFKANFANVVLIMTSNIGASE 595
>gi|431806223|ref|YP_007233124.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Liberibacter
crescens BT-1]
gi|430800198|gb|AGA64869.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Liberibacter
crescens BT-1]
Length = 779
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE++L V+GQE AI + ++K K + + P G GK V+ + S
Sbjct: 466 LEKELGSVVYGQEEAIKVLSSSIKMARAGLREPNKPIGCYIFSGPTGVGKTEVSRQLSSF 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ + S ++ + SR+ +V + L + +V ++ + DE++K
Sbjct: 526 LGVKLLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDSVDQNPHSVVLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFL 178
+ +++ +D+ + +Q I+F+NTI + +N+G E+ + +
Sbjct: 583 AHPDIFSILLQVMDYGMLTDQNGKKINFRNTILIMTTNAGVVEMSKSLI 631
>gi|316933621|ref|YP_004108603.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Rhodopseudomonas palustris DX-1]
gi|315601335|gb|ADU43870.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Rhodopseudomonas palustris DX-1]
Length = 795
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + SS
Sbjct: 460 LEQTLKRVVFGQDKAIEALSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLASS 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G ++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADLARQAFGFTRSK 631
>gi|225867735|ref|YP_002743683.1| stress response-related Clp ATPase [Streptococcus equi subsp.
zooepidemicus]
gi|225701011|emb|CAW97772.1| putative stress response-related Clp ATPase [Streptococcus equi
subsp. zooepidemicus]
Length = 812
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE+A+S I A+ +N R + G G GK + +
Sbjct: 508 LEKKLHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKALAEL 567
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + V A+ +
Sbjct: 568 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YDEGGELTEKVRNKPYAVLL 621
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + ++++ +D + + ++ F NTI + SN G T +
Sbjct: 622 FDEVEKAHPDIFNILLQVLDDGMLTDSRGRKVDFSNTIIIMTSNLGATAL 671
>gi|350270494|ref|YP_004881802.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Oscillibacter
valericigenes Sjm18-20]
gi|348595336|dbj|BAK99296.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Oscillibacter
valericigenes Sjm18-20]
Length = 772
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
L+ +L+ H+ GQ+ A+ + A++ + K ++ G G GK + + +
Sbjct: 475 LDIRLESHIVGQDEAVEAVTAAVRRNRVGISPKHKPVSFIFVGPTGVGKTELVKQLAKDL 534
Query: 76 FKRYK---DKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFDE 130
F S F+ K++ SRI +V QLT I A+ +FDE
Sbjct: 535 FNTPDALIRLDMSEFMEKYSVSRIVGSPPGYVGYDEAGQLTEKIRRK----PYAVILFDE 590
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSG 169
++K +L++++ +D + + +++F+NT+ + SN+G
Sbjct: 591 IEKAHPDVLNILLQILDDGEITDSHGRKVNFENTVIVMTSNAG 633
>gi|424782879|ref|ZP_18209724.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Campylobacter
showae CSUNSWCD]
gi|421959325|gb|EKU10935.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Campylobacter
showae CSUNSWCD]
Length = 721
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVT 68
++N++ L ++LK + GQ+ AI + A+K + + + L G G GK+ ++
Sbjct: 422 AANLKNLAQRLKSEIFGQDEAIDALVAAIKRSYAGLKQPNAPVGVFLFTGSSGVGKSELS 481
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDRAIF 126
+ ++ ++ S ++ K + SR+ +V I++N V ++
Sbjct: 482 AALARNLGVHFERFDMSEYMEKHSVSRLIGAPPGYVGFEE----GGILTNAVKKHPYSVI 537
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTE 172
+FDE++K +++V + D ++ + F+N + + SN G E
Sbjct: 538 LFDEIEKASDEMINVFLQIFDSASLTDNTGAKSDFRNAVIIMSSNLGSKE 587
>gi|418938712|ref|ZP_13492186.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium sp.
PDO1-076]
gi|375054568|gb|EHS50918.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Rhizobium sp.
PDO1-076]
Length = 824
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + A+K R N + G G GK V + +S
Sbjct: 466 LEKELRSVVYGQDTAIEALSTAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 526 LGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHSVVLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +DH ++ + +I F+N I + +N+G +E+ +
Sbjct: 583 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKS 629
>gi|418028422|ref|ZP_12666988.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
thermophilus CNCM I-1630]
gi|354687252|gb|EHE87352.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
thermophilus CNCM I-1630]
Length = 472
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 5 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPG 61
+K Q+ + R L E +L + V GQ+ A+S I A++ N R + G G
Sbjct: 155 EKMTQTDSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTG 214
Query: 62 TGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 114
GK + + +F R+ S ++ KF SR++ +V +
Sbjct: 215 VGKTELAKALAEVLFDDESALLRFD---MSEYMEKFAASRLNGAPPGYVGYDE---GGEL 268
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 170
V ++ +FDE++K + ++++ +D + + ++ F NTI + SN G
Sbjct: 269 TEKVRNKPYSVLLFDEIEKAHPDIFNILLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGA 328
Query: 171 TEIMN 175
T + +
Sbjct: 329 TALRD 333
>gi|49475406|ref|YP_033447.1| endopeptidase Clp ATP-binding chain a [Bartonella henselae str.
Houston-1]
gi|49238212|emb|CAF27422.1| Endopeptidase clp ATP-binding chain a [Bartonella henselae str.
Houston-1]
Length = 783
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K K + L P G GK VT + SS
Sbjct: 457 LERELKHVVYGQDQAISVLVSSIKLARAGLRDADKPIGSYLFSGPTGVGKTEVTKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +D+ + + +I F+N I + +N+G +++ +
Sbjct: 574 AHSELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKS 620
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LEE L + V GQ+ AI+ I A++ + + + L G G GK + +
Sbjct: 509 LEEALHERVVGQDEAINAISRAIRRARSGLKDPRRPVGVFLFLGPTGVGKTELAKALAEY 568
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S ++ KF+ SR+ +V + + V ++ +FDE
Sbjct: 569 LFGDEKALIRFDMSEYMEKFSVSRLIGAPPGYVGY---EEGGTLTEKVRRRPFSVILFDE 625
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
++K + ++++ +D + + + F+NTI + SN GG EI+ +
Sbjct: 626 IEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNIGGAEIVTS 675
>gi|420240527|ref|ZP_14744744.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF080]
gi|398076181|gb|EJL67260.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF080]
Length = 843
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + A+K R N + G G GK V + +S
Sbjct: 467 LEKELRSVVYGQDVAIEALSTAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 527 LGVEILRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH ++ + +I F+N I + +N+G +E+
Sbjct: 584 AHPDIYNILLQVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEM 627
>gi|410615564|ref|ZP_11326583.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Glaciecola
psychrophila 170]
gi|410164977|dbj|GAC40472.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Glaciecola
psychrophila 170]
Length = 758
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 5 DKFIQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP- 60
+K + +S+ +VL + LK V GQ+ AI + A++ + TK + L P
Sbjct: 439 EKSVSASDKQVLKHLDRDLKLVVFGQDQAIDTLTDAIRLSRSGLGNETKPIGNFLFAGPT 498
Query: 61 GTGKNYVTD------------FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL 108
G GK VT F +S +R+ SR + + F
Sbjct: 499 GVGKTEVTAQLAKVMGVELLRFDMSEYMERH---AVSRLIGAPPGYVGFDQGG------- 548
Query: 109 QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLF 164
LT+ +I N + + + DEV+K + ++++ +DH + + ++ F+N + +
Sbjct: 549 LLTDAVIKNPYS----VILLDEVEKAHSDIYNILLQVMDHGTLTDNNGRKVDFRNVVLVM 604
Query: 165 LSNSGGTEIMNTFLELRKSE 184
+N+G E + T + ++ +
Sbjct: 605 TTNAGVQETIRTSIGFKQQD 624
>gi|406917094|gb|EKD55955.1| clp protease ATP binding subunit [uncultured bacterium]
Length = 843
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 22 QHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSSIFKRYK 80
Q + GQ+ AIS I A++ + + L G G GK + + FK
Sbjct: 555 QRIIGQDEAISVISNAMRRARAGLADKNRPMGSFLFLGPTGVGKTETAKALAEAYFK--S 612
Query: 81 DKGTSRF-VHKFNSR------IHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
DK RF + +F I + + + + +LTN I N ++ + DE++K
Sbjct: 613 DKNIVRFDMSEFQEAKSVELLIGSSSVSKDATSQGRLTNAIKDN----PYSLILLDEIEK 668
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
+L++++ +D + + I F NTI + SN+G +I
Sbjct: 669 AHPNILNLLLQVLDEGKLTDSAGRTIDFSNTIIIVTSNAGAEQI 712
>gi|375091049|ref|ZP_09737352.1| hypothetical protein HMPREF9709_00214 [Helcococcus kunzii ATCC
51366]
gi|374564567|gb|EHR35855.1| hypothetical protein HMPREF9709_00214 [Helcococcus kunzii ATCC
51366]
Length = 796
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKN-HFQNRYHNTKALAISLHGLPGTGKNYV 67
++ R L++ LK V GQ+ A+ + A+K + N+ G G GK Y+
Sbjct: 480 ENEKYRDLDKNLKGVVIGQDDAVEKVAKAIKRARVGLKDENSPIGTFIFVGPTGVGKTYL 539
Query: 68 TDFIVSSIF-----------KRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIIS 116
I S+IF Y +K H + I P QLT + S
Sbjct: 540 AKQIASNIFDSDDSLIRIDMSEYMEK------HSISKLIGSPPGYVGYDEGGQLTEKVRS 593
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
N ++ +FDE++K + ++++ +D + + ++ F NTI + SN+G ++
Sbjct: 594 N----PYSVILFDEIEKAHPDVFNMLLQILDEGRLTDSQGREVDFTNTIIILTSNAGASQ 649
Query: 173 I 173
+
Sbjct: 650 L 650
>gi|390941056|ref|YP_006404793.1| ATP-dependent Zn protease [Sulfurospirillum barnesii SES-3]
gi|390194163|gb|AFL69218.1| ATP-dependent Zn protease [Sulfurospirillum barnesii SES-3]
Length = 806
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 9 QSSNVRVL----EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
+ N RVL EE+LK+ + Q+ AI +C L H + + +AL ++ G P GK
Sbjct: 3 EEKNYRVLNISLEERLKEVLFDQDFAIEMLCKTL-GHMRLFHSKIRAL-LTFIGPPNCGK 60
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
Y+ + + ++D F + F + N L L N I+ V R+
Sbjct: 61 RYLAELL------PHEDSAIEHF-YAFQMDQYTEAYNPEEGLSLSLFNTIVDCVRKYPRS 113
Query: 125 IFIFDEVDK 133
+ F+++DK
Sbjct: 114 VLFFEDIDK 122
>gi|270157268|ref|ZP_06185925.1| putative helicase [Legionella longbeachae D-4968]
gi|289164339|ref|YP_003454477.1| hypothetical protein LLO_0997 [Legionella longbeachae NSW150]
gi|269989293|gb|EEZ95547.1| putative helicase [Legionella longbeachae D-4968]
gi|288857512|emb|CBJ11349.1| hypothetical protein LLO_0997 [Legionella longbeachae NSW150]
Length = 1133
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 19 QLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKR 78
++K H GQ +A SH N N +++ G PG GK Y +++ + K+
Sbjct: 718 RIKDHTSGQAIAPSHDPERRLNEIIKAVVNLDNSYLTIQGPPGAGKTYTGKHLIAELIKK 777
Query: 79 YKDKGTSRFVHK 90
K G S HK
Sbjct: 778 GKKVGVSSNSHK 789
>gi|405383435|ref|ZP_11037198.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF142]
gi|397320104|gb|EJJ24549.1| ATP-dependent Clp protease ATP-binding subunit clpA [Rhizobium sp.
CF142]
Length = 830
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ++AI + ++K R N A G G GK V + +S
Sbjct: 468 LEQELRSVVYGQDVAIEALSTSIKLARAGLREPNKPIGAYVFSGPTGVGKTEVAKQLAAS 527
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 528 LGVEILRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 584
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 585 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 628
>gi|374107854|gb|AEY96761.1| FAEL223Cp [Ashbya gossypii FDAG1]
Length = 803
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ L + V GQ+ AIS IC A++ + + +A + G GTGK +T +
Sbjct: 484 MEQSLTKRVVGQDEAISAICQAVRLQRAGLTSSKRPIASFMFLGPTGTGKTELTKALSEF 543
Query: 75 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + RF H + I P +S QLT V A+ +
Sbjct: 544 LFD--NESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 597
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
FDE +K + V++ +D + + + F+NTI + SN G ++N
Sbjct: 598 FDEFEKAHPDVCKVLLQVLDDGKLTDSQGHHVDFRNTIIVMTSNVGQDILLN 649
>gi|302307871|ref|NP_984638.2| AEL223Cp [Ashbya gossypii ATCC 10895]
gi|299789209|gb|AAS52462.2| AEL223Cp [Ashbya gossypii ATCC 10895]
Length = 803
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ L + V GQ+ AIS IC A++ + + +A + G GTGK +T +
Sbjct: 484 MEQSLTKRVVGQDEAISAICQAVRLQRAGLTSSKRPIASFMFLGPTGTGKTELTKALSEF 543
Query: 75 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + RF H + I P +S QLT V A+ +
Sbjct: 544 LFD--NESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 597
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
FDE +K + V++ +D + + + F+NTI + SN G ++N
Sbjct: 598 FDEFEKAHPDVCKVLLQVLDDGKLTDSQGHHVDFRNTIIVMTSNVGQDILLN 649
>gi|299144517|ref|ZP_07037596.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517605|gb|EFI41345.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 812
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYV 67
Q+ + LE LK++V GQ+ AI+ + A+K K + + G G GK Y+
Sbjct: 488 QNKKLLHLEGNLKKNVKGQDDAIASVSKAIKRARIGLKDPNKPIGSFIFVGPTGVGKTYL 547
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACD 122
+ +F ++ S ++ K + S++ +V QLT+ + +N
Sbjct: 548 AKMLAKELFGSEENLLRIDMSEYMEKHSVSKLVGSPPGYVGYDEPGQLTDAVRTN----P 603
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
++ +FDE++K + ++++ +D + + +SF++T+ + SN+G + + N
Sbjct: 604 YSVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVSFKDTLIIMTSNAGASFLKN 660
>gi|315452923|ref|YP_004073193.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
gi|315131975|emb|CBY82603.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter felis
ATCC 49179]
Length = 735
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
++++ LEEQLK+ V Q+ AI H+ A+K H K +A L G G GK +
Sbjct: 428 HKNHLKNLEEQLKKEVVAQDGAIEHLVKAIKIHASGLVGEQKPIASFLFVGPSGVGKTEL 487
Query: 68 TDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+ + +R+ D + H + I P+ +V + L +++ +
Sbjct: 488 AKALAKHMHLHLERF-DMSEYKEAHSISKLIGAPS-GYVGFDQGGL---LVNAIRKHPHC 542
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMNT-FLE 179
+ + DE++K + D+++ D+ + + F++ I + SN+G + + FLE
Sbjct: 543 VLLLDEIEKAHPNIYDLLLQITDNATLTDNSGRKGDFKHAILILTSNAGSDALGSLGFLE 602
Query: 180 LR 181
R
Sbjct: 603 DR 604
>gi|333984716|ref|YP_004513926.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Methylomonas
methanica MC09]
gi|333808757|gb|AEG01427.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylomonas
methanica MC09]
Length = 759
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK V GQ+ AIS + A+K TK + L P G GK VT +
Sbjct: 453 LEKNLKMLVFGQDEAISELASAIKLSRAGLRDTTKTIGSFLFAGPTGVGKTEVTRQLAKV 512
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + +T ++ + DE++K
Sbjct: 513 LGIELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEAITKHPHSVLLLDELEK 569
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
+ ++++ +DH + + + F+N I + +N+G E
Sbjct: 570 AHPDVFNLLLQVMDHGTLTDNNGRKADFRNVILIMTTNAGAEE 612
>gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|54035809|sp|Q7VBL0.1|CLPB_PROMA RecName: Full=Chaperone protein ClpB
gi|33238060|gb|AAQ00127.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 864
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE++L V GQ+ A+ + +++ ++ + + L G G GK ++ +
Sbjct: 569 LEDKLNSKVIGQKQAVQAVADSIQRSRTGLSDPSRPMGSFLLLGPTGVGKTELSKSLAKE 628
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+F K S ++ K + SR+ +V QL+ + N ++ +FD
Sbjct: 629 LFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRN----PYSVILFD 684
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSEC 185
EV+K +L++++ +D + + I+F+NTI + SN G I+ + + E
Sbjct: 685 EVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESIIEMTNKKNEYEL 744
Query: 186 IEFIFQCQPLKVYLK 200
IE + + Q LK Y K
Sbjct: 745 IEEVVRNQ-LKNYFK 758
>gi|88798704|ref|ZP_01114287.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
gi|88778467|gb|EAR09659.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
blandensis MED297]
Length = 756
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK V GQ+ AI +I A+K K + L P G GK VT + S
Sbjct: 457 LERNLKMTVFGQDEAIENIASAIKLARAGLKSADKPIGSFLFAGPTGVGKTEVTKQLAES 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 517 LGVELLRFDMSEYMERHTASRLIGAPPGYVGFDQGGL---LTDGVNRHPHCVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + + F+N I + SN+G E+
Sbjct: 574 AHPDVFNLLLQVMDHGTLTDNNGRKTDFRNVILILTSNAGAQEM 617
>gi|146341454|ref|YP_001206502.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Bradyrhizobium sp. ORS 278]
gi|146194260|emb|CAL78282.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Bradyrhizobium sp. ORS 278]
Length = 795
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LEQTLKRVVFGQDKAIDSLSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAST 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSE 184
L +V++ +DH + + Q++F+N I + +N+G ++ +S+
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADLAKQAFGFHRSK 631
>gi|119945376|ref|YP_943056.1| recombination factor protein RarA [Psychromonas ingrahamii 37]
gi|119863980|gb|ABM03457.1| Recombination protein MgsA [Psychromonas ingrahamii 37]
Length = 442
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 28/126 (22%)
Query: 32 SHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRF---- 87
+HI GA K +N N A ++ L G PGTGK + + I S Y D R
Sbjct: 30 AHIIGAGK-PLRNALENGAAHSMILWGPPGTGKTTLAELIAS-----YCDAHVERLSAVT 83
Query: 88 --VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPF 145
+ + + I +N TN I R + DEV +F K D +P+
Sbjct: 84 SGIKEIRAAIEIAQQNR--------TNGI--------RTLLFVDEVHRFNKAQQDAFLPY 127
Query: 146 IDHHAV 151
I+ +
Sbjct: 128 IEDGTI 133
>gi|302872842|ref|YP_003841478.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575701|gb|ADL43492.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 608
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 22/174 (12%)
Query: 17 EEQLKQHVHGQELAISHICGALKNHFQN-------RYHNTKALAISLHGLPGTGKNYVTD 69
EE L V GQE A+ L+ F N RY N + G G GK +
Sbjct: 286 EEFLNSRVMGQEKAVKQAATILRRAFFNLSGSQFSRYSNRPKGVLFFAGPTGVGKTELAK 345
Query: 70 FIVSSIFKR---YKDKGTSRFVHK-FNSRIHFPNENHVSLYRL--QLTNWIISNVTACDR 123
I IF Y S F H+ + R+ +V Y + +LTN + N +
Sbjct: 346 AITELIFGSEHHYIRFDMSEFSHEHSDQRLIGAPPGYVG-YDVGGELTNAVKQNPFS--- 401
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ +FDE++K +LD+ + +D + + + F ++ +F SN G E+
Sbjct: 402 -VILFDEIEKAHPKILDIFLQILDDGRLTSGRGETVYFSESLIIFTSNLGVYEM 454
>gi|417005785|ref|ZP_11944378.1| hypothetical protein FSLSAGS3026_08390 [Streptococcus agalactiae
FSL S3-026]
gi|341577598|gb|EGS28006.1| hypothetical protein FSLSAGS3026_08390 [Streptococcus agalactiae
FSL S3-026]
Length = 613
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
L+E+L + V GQE AI I A+ K ++ L G G GK + I +
Sbjct: 292 LKEKLMRRVKGQEEAIEAIVDAVTIAQAGLQDENKPISSFLFLGPTGVGKTELAKAIAEA 351
Query: 75 IFKRYKDKGTS-RF---VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F D+G RF +K + N + + QLT V + + DE
Sbjct: 352 LFD---DEGAMIRFDMSEYKQKDDVAKLIGNRATKTKGQLT----EGVKQKPYCVLLLDE 404
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTF 177
V+K ++D+ + +D + + ISF+NTI + +N G +I+N +
Sbjct: 405 VEKAHGEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW 455
>gi|395792163|ref|ZP_10471601.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423714168|ref|ZP_17688427.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395421315|gb|EJF87571.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432677|gb|EJF98652.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 783
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESEKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +D+ + + +I F N I + +N+G +E+ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFCNIILIMTTNAGASELAKS 620
>gi|99035121|ref|ZP_01314905.1| hypothetical protein Wendoof_01000251 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 768
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ L+ L++ V GQE AI + ++K + K LA L P G GK + +
Sbjct: 469 VKSLKANLEKVVFGQEQAIESLVNSIKIAKSGLRNYNKPLANYLFAGPTGVGKTELAKQL 528
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
S+ S ++ H + I P +V + L +SN ++ + D
Sbjct: 529 AESMGMNLIRFDMSEYIESHTISRMIGSP-PGYVGYDQGGLLTESVSN---NQYSVVLLD 584
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
E++K + ++++ +D+ V + +++F N I + +N+G E +F+
Sbjct: 585 EIEKAHSDIYNILLQIMDYGCVTDTYGRKVNFSNIILIMTTNAGAAERSKSFV 637
>gi|78778965|ref|YP_397077.1| ATPase [Prochlorococcus marinus str. MIT 9312]
gi|78712464|gb|ABB49641.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 860
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE LK+ + GQ+ AI + ++K K LA L G G GK ++
Sbjct: 565 LESILKEKIIGQDSAIRAVADSIKRSRTGLNDPNKPLASFLFLGPTGVGKTELSKVTAKI 624
Query: 75 IFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
IF S ++ K + S+I ++ QLT + N + + + D
Sbjct: 625 IFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGGQLTEAVRKNPYS----LILLD 680
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSEC 185
E++K K +LD+++ +D + + I+F+N+I + SN G I + L +RK +
Sbjct: 681 EIEKAHKDILDILLQVLDDGIITDGQGRTINFKNSIIVLTSNLGSQSIND--LSVRKEDT 738
Query: 186 IEF 188
E
Sbjct: 739 NEI 741
>gi|357384661|ref|YP_004899385.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Pelagibacterium halotolerans B2]
gi|351593298|gb|AEQ51635.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Pelagibacterium halotolerans B2]
Length = 794
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK+ V GQ+ AI + A+K K + + P G GK V + +
Sbjct: 465 LEANLKRVVFGQDKAIDALSSAIKLARAGLREPEKPIGSYMFTGPTGVGKTEVAKQLADT 524
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V ++ + DE++K
Sbjct: 525 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---MTDGVDQHPHSVLLLDEIEK 581
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +DH + + Q+ F+N I + SN G TE+ +
Sbjct: 582 AHPDLFNILLQVMDHGKLTDHSGKQVDFRNVILIMTSNVGATELAKS 628
>gi|110633726|ref|YP_673934.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chelativorans
sp. BNC1]
gi|110284710|gb|ABG62769.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chelativorans
sp. BNC1]
Length = 819
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+ AI + A+K K + L P G GK V + +S
Sbjct: 466 LETELKRVVYGQDKAIEALASAIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + +I F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKRIDFRNVILIMTTNAGAADM 626
>gi|408907739|emb|CCM10789.2| ATP-dependent Clp protease ATP-binding subunit ClpA [Helicobacter
heilmannii ASB1.4]
Length = 727
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+ ++++ LE+QLK+ V Q+ AI+ + +K H K +A L G G GK +
Sbjct: 415 KKNHLKGLEDQLKKEVFAQDEAITRLVETIKIHASGLAGTRKPVASFLFVGPSGVGKTEL 474
Query: 68 TDFIVSSI---FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRA 124
+ + +R+ D + H + I P+ + +++ + R
Sbjct: 475 AKVLAKHLHLHLERF-DMSEYKEPHSVSKLIGAPS----GYVGFEQGGLLVNAIRKHPRC 529
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS----FQNTIFLFLSNSG 169
+ + DE++K + D+++ D + + F++ I + SN+G
Sbjct: 530 VLLLDEIEKAHPNVYDLLLQITDDATLTDNTGRKSDFRHAILILTSNAG 578
>gi|407009871|gb|EKE24919.1| hypothetical protein ACD_5C00356G0006 [uncultured bacterium]
Length = 824
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LEE L + V GQE A+ + AL+ + K + L G G GK + +
Sbjct: 538 LEEHLHKLVIGQEEAVRQVSEALRRARSGIGNANKPVGSFLFLGPTGVGKTETAKALAKT 597
Query: 75 IFKRYKDKGTSRF-VHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
F DK R + +F S P+ + + L +L + + + + + DE+
Sbjct: 598 YFG--DDKHLVRLDMSEFKS----PSSIDRLLGLSQLGEQGRLTTMIKDNPYCLLLLDEI 651
Query: 132 DKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSECIE 187
+K +LD+ + +D V + +I+F+NT+ + SN+G + I K E I+
Sbjct: 652 EKANPEILDIFLQILDEGYVTDAFGEKINFRNTLIIATSNAGASLIKRMVENKSKGEEIK 711
>gi|158423219|ref|YP_001524511.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
gi|158330108|dbj|BAF87593.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
Length = 817
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK+ V+GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LETTLKRVVYGQDKAIEALASSIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAST 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVNLLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQTPHCVLLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 577 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADL 620
>gi|402826950|ref|ZP_10876088.1| ATP-dependent Clp protease ATP-binding subunit ClpA, partial
[Sphingomonas sp. LH128]
gi|402259516|gb|EJU09741.1| ATP-dependent Clp protease ATP-binding subunit ClpA, partial
[Sphingomonas sp. LH128]
Length = 557
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK+ V GQ+ AI + A+K K + L P G GK V + S
Sbjct: 233 LERDLKRVVFGQDKAIGLLATAMKLSRAGLRDPDKPIGSFLFSGPTGVGKTEVARQLASI 292
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ K S ++ + + SR+ +V + L I C + + DE++K
Sbjct: 293 MGIELKRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQNPHC---VLLLDEIEK 349
Query: 134 FPKGLLDVIIPFI------DHHAVYNQISFQNTIFLFLSNSGGTEI 173
L ++++ + DHH + F+N + + +N+G +++
Sbjct: 350 AHPDLFNILLQVMDNGRLTDHHG--KTVDFRNVVLIMTTNAGASDM 393
>gi|455789574|gb|EMF41495.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Leptospira
interrogans serovar Lora str. TE 1992]
Length = 592
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 2 ACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP- 60
+ T K ++ L+E+LK ++GQ+ AI + +++ K + L P
Sbjct: 280 SVTVKADDREKLKNLDEELKAKIYGQDSAIDQLVQSIRLSRSGLSEPGKPVGSFLFAGPT 339
Query: 61 GTGKNYVTDFIVSSI--------FKRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLT 111
G GK +T + + Y +K T SR + + F QLT
Sbjct: 340 GVGKTELTRKLAEILGVELIRFDMSEYMEKHTVSRLIGSPPGYVGFEQGG-------QLT 392
Query: 112 NWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 167
+ + N C + + DE++K + + ++++ +DH + + + F+ I + +N
Sbjct: 393 DAVYRN-PHC---VLLLDEIEKAHEDIYNILLQIMDHATLTDNNGRKSDFRQAILVMTTN 448
Query: 168 SGGTE-------IMNTFLELRKSECIEFIFQCQ 193
+G E N LE R + IE F +
Sbjct: 449 TGARERSTNPVGFANDLLEDRSLKAIEKQFSPE 481
>gi|451343578|ref|ZP_21912649.1| ATP-dependent chaperone ClpB [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337675|gb|EMD16832.1| ATP-dependent chaperone ClpB [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 856
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGT 62
K +QS ++L E +K+ V GQ++A+S + A L++ N + G G
Sbjct: 551 KLVQSEKEKLLGLEAAIKERVIGQDMAVSKVADAILRSRAGINDVNRPIGSFLFLGPTGV 610
Query: 63 GKNYVTDFIVSSIFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISN 117
GK V + +F K+ S ++ KF+ SR+ +V + QLT
Sbjct: 611 GKTEVAKSLAEQLFDSEKNIVRIDMSEYMEKFSVSRLIGAPPGYVGYDQGGQLT----EA 666
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEI 173
V +I + DE++K + ++++ +D + N +SF+NTI + SN G +
Sbjct: 667 VRRAPYSIVLLDEIEKAHPDVFNILLQLLDDGRLTDSKGNVVSFKNTIIIMTSNIGSQYL 726
Query: 174 M 174
+
Sbjct: 727 L 727
>gi|315638012|ref|ZP_07893197.1| chaperone protein ClpB [Campylobacter upsaliensis JV21]
gi|315481860|gb|EFU72479.1| chaperone protein ClpB [Campylobacter upsaliensis JV21]
Length = 857
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 6 KFIQSSNVRVLE--EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
K ++S + LE + LK+ V GQ+ A++ + A+K + +K + L G G
Sbjct: 553 KMLKSEKQKFLEVEKHLKESVIGQDRALNALAKAIKRNKAGLNEGSKPIGSFLFLGPTGV 612
Query: 63 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 118
GK + +F K S F+ K + SR+ ++ + + V
Sbjct: 613 GKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSISRLLGAPPGYIGH---EEGGELTEAV 669
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 174
++ +FDEV+K K + ++++ +D + + F+NTI + SN T IM
Sbjct: 670 RRKPYSVILFDEVEKAHKDVFNILLGILDDARATDSKGVSVDFKNTIIILTSNIASTAIM 729
Query: 175 N 175
N
Sbjct: 730 N 730
>gi|332522720|ref|ZP_08398972.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
gi|332313984|gb|EGJ26969.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
Length = 813
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LEE+L + V GQ+ AIS I A+ +N R + G G GK + +
Sbjct: 509 LEEELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEV 568
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF+ SR++ +V + V ++ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFSASRLNGAPPGYVG---YDEGGELTEKVRNRPYSVLL 622
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFTNTIIIMTSNLGATAL 672
>gi|163815425|ref|ZP_02206798.1| hypothetical protein COPEUT_01588 [Coprococcus eutactus ATCC 27759]
gi|158449062|gb|EDP26057.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus eutactus ATCC 27759]
Length = 825
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+S + LE +L + V GQE A+S + A+K + + L G G GK +
Sbjct: 497 ESKRLEKLETELHKRVVGQEEAVSAVAKAIKRSRVGLKDPRRPIGTFLFLGPTGVGKTEL 556
Query: 68 TDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 115
+ + +F Y +K S+ + + F +S
Sbjct: 557 SKALADVVFGSEDALIRVDMSEYMEKHSVSKLIGSPPGYVGFEEGGQLS----------- 605
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 171
V ++ +FDE++K + ++++ +D + + ++ F+NTI + SN+G
Sbjct: 606 EKVRTNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNTGAQ 665
Query: 172 EIMN 175
I++
Sbjct: 666 RIID 669
>gi|386580851|ref|YP_006077256.1| ATPase [Streptococcus suis JS14]
gi|319759043|gb|ADV70985.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis JS14]
Length = 817
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE AIS + A+ +N R + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKTELAKALAEI 569
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFATSRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NT+ + SN G T +
Sbjct: 624 FDEVEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATAL 673
>gi|49474300|ref|YP_032342.1| endopeptidase Clp ATP-binding chain a [Bartonella quintana str.
Toulouse]
gi|49239804|emb|CAF26194.1| Endopeptidase clp ATP-binding chain a [Bartonella quintana str.
Toulouse]
Length = 783
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQRPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +D+ + + +I F+N I + +N+G +++ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKS 620
>gi|403530581|ref|YP_006665110.1| endopeptidase Clp ATP-binding subunit A [Bartonella quintana RM-11]
gi|403232652|gb|AFR26395.1| endopeptidase Clp ATP-binding chain a [Bartonella quintana RM-11]
Length = 783
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQRPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +D+ + + +I F+N I + +N+G +++ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKS 620
>gi|357030473|ref|ZP_09092417.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
morbifer G707]
gi|356415167|gb|EHH68810.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
morbifer G707]
Length = 771
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVARQL 514
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 572 IEKAHPDLFNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 618
>gi|329889201|ref|ZP_08267544.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
diminuta ATCC 11568]
gi|328844502|gb|EGF94066.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
diminuta ATCC 11568]
Length = 767
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVT 68
+ ++R LE LK+ V GQE AI + A+K R N A G G GK V
Sbjct: 453 TESLRELETDLKRVVFGQEQAIDQVSAAMKLARAGLRDPNKPIGAFLFSGPTGVGKTEVA 512
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ + +++ + S ++ + SR+ +V + L + V ++ +
Sbjct: 513 NQLAATLGIEMQRFDMSEYMERHTVSRLIGAPPGYVGHDQGGL---LTDAVDQHPHSVVL 569
Query: 128 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 172
DE++K + ++++ +D+ AV ++ F+N I + +N+G +
Sbjct: 570 LDEIEKAHPDVYNILLQVMDNGTLTDAVGKKVDFRNVILIMTTNAGAAD 618
>gi|218779932|ref|YP_002431250.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Desulfatibacillum alkenivorans AK-01]
gi|218761316|gb|ACL03782.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Desulfatibacillum alkenivorans AK-01]
Length = 744
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK+ V GQ+ A+ + A+K + + L P G GK V + +
Sbjct: 450 LESDLKKMVFGQDEAVQTVATAIKRSRAGLASQERPVGSFLFTGPTGVGKTEVAKQLAQT 509
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ + S ++ K SR+ +V + L + C + + DE++K
Sbjct: 510 LGIAFLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGLLTDAVRRTPHC---VLLLDEIEK 566
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ + +V++ +DH + + + F+N I + SN+G E+
Sbjct: 567 AHEDIFNVLLQVMDHATLTDNNGKKADFRNAILIMTSNAGAREM 610
>gi|365858035|ref|ZP_09397995.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Acetobacteraceae bacterium AT-5844]
gi|363714818|gb|EHL98297.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Acetobacteraceae bacterium AT-5844]
Length = 782
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 462 LRTLERDLKSMVFGQDKAIEALSAAIKLARAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 521
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ S ++ + + SR+ +V + L + ++ A+ + DE
Sbjct: 522 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDSIDQHPHAVLLLDE 578
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L ++++ +DH + + + F+N I + +N+G ++
Sbjct: 579 IEKAHQDLYNILLQVMDHGKLTDHNGKTVDFRNVILIMTTNAGAADM 625
>gi|126695944|ref|YP_001090830.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9301]
gi|126542987|gb|ABO17229.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9301]
Length = 860
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 30/190 (15%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
LE LK+ + GQ+ AI + ++K +K LA L G G GK ++
Sbjct: 565 LESILKEKIIGQDCAIRAVADSIKRSRTGLNDPSKPLASFLFLGPTGVGKTELSKVTAKI 624
Query: 75 IF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
IF Y +K S+ + + F + QLT + N +
Sbjct: 625 IFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGG-------QLTEAVRKNPYS-- 675
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
+ + DE++K K +LD+++ +D + + I+F+N+I + SN G I + L
Sbjct: 676 --LILLDEIEKAHKDILDILLQVLDDGIITDGQGRTINFKNSIIVLTSNLGSQSIND--L 731
Query: 179 ELRKSECIEF 188
+RK + E
Sbjct: 732 SVRKEDKNEI 741
>gi|399517318|ref|ZP_10758870.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
gi|398647724|emb|CCJ66897.1| ClpB protein [Leuconostoc pseudomesenteroides 4882]
Length = 547
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL----AISLHGLPGTGK 64
+++ ++ L++ L +HV GQE A+ + A++ +NR TK+ + G G GK
Sbjct: 237 EANQLQDLDKNLSEHVVGQENAVETVAKAVR---RNRIGLTKSGRPIGSFLFVGPTGVGK 293
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRL---------QLTNWII 115
+ +F G+ + +F+ + E H + + + +
Sbjct: 294 TETAKQLAKEMF------GSEDAMIRFDMSEYM--EKHTASKMIGAPAGYVGYEEAGQLT 345
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGT 171
V ++ +FDEV+K ++++ + +D + + +SF++TI + SN+G T
Sbjct: 346 EQVRRHPYSLVLFDEVEKAHPDIMNMFLQILDDGRLTDAQGHVVSFKDTIVIMTSNAGST 405
Query: 172 EIMNT 176
+ N+
Sbjct: 406 DTGNS 410
>gi|419610085|ref|ZP_14144157.1| ATP-dependent chaperone protein ClpB [Campylobacter coli H8]
gi|380590646|gb|EIB11650.1| ATP-dependent chaperone protein ClpB [Campylobacter coli H8]
Length = 857
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|328543446|ref|YP_004303555.1| endopeptidase Clp ATP-binding chain A [Polymorphum gilvum
SL003B-26A1]
gi|326413190|gb|ADZ70253.1| Endopeptidase Clp ATP-binding chain A [Polymorphum gilvum
SL003B-26A1]
Length = 813
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L ++LK+ V+GQ+ AI + A+K K + L P G GK V + SS
Sbjct: 462 LGDELKRVVYGQDKAIDTLASAIKLARAGLREPDKPIGSYLFSGPTGVGKTEVARQLASS 521
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 522 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 578
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 579 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADM 622
>gi|57238288|ref|YP_178631.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
gi|57167092|gb|AAW35871.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni RM1221]
Length = 857
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDSRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|312864373|ref|ZP_07724606.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
gi|311100094|gb|EFQ58305.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
Length = 815
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 5 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPG 61
+K Q+ N R L E++L + V GQ+ A+S + A++ N R + G G
Sbjct: 497 EKMTQADNQRYLNLEKELHKRVIGQDDAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTG 556
Query: 62 TGKNYVTDFIVSSIFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 114
GK + + +F R+ S ++ KF SR++ +V + +
Sbjct: 557 VGKTELAKALAELLFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGEL 610
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGG 170
V ++ +FDEV+K + +V++ +D + + ++ F NTI + SN G
Sbjct: 611 TEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGA 670
Query: 171 TEI 173
T +
Sbjct: 671 TAL 673
>gi|440796879|gb|ELR17980.1| hypothetical protein ACA1_208610 [Acanthamoeba castellanii str.
Neff]
Length = 394
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 26 GQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTS 85
GQE A I AL+ K L G G GK++ T +++ + YKDK T
Sbjct: 70 GQERAAVLIADALRA-----ASGKKPLTFHFCGENGVGKSH-TALLLAEAYFAYKDKKTD 123
Query: 86 RFVHKF----NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFPKGLLDV 141
+ +E + R + II ++ C +AI + DE + +L V
Sbjct: 124 MYKGLLWISGKQYQMAKSEEEIKAAREYIHEQIIDHLATCPQAIIVIDEAEMMRADILRV 183
Query: 142 IIPFIDHHAVY--------NQISFQNTIFLFLSNSGGTEI 173
+ F+D +++ + I + +S+ G EI
Sbjct: 184 VGAFMDDSQTTVSSLKDPSKRVNTKEAIIILISDFGRDEI 223
>gi|344940385|ref|ZP_08779673.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylobacter
tundripaludum SV96]
gi|344261577|gb|EGW21848.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Methylobacter
tundripaludum SV96]
Length = 757
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK V GQ+ AIS + A+K K + L P G GK VT +
Sbjct: 453 LEKNLKMLVFGQDEAISALASAIKLSRAGLRDTQKTIGSFLFAGPTGVGKTEVTRQLAKV 512
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + VT A+ + DE++K
Sbjct: 513 LGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEQVTKHPHAVLLLDELEK 569
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
+ ++++ +DH ++ + + F+N I + +N+G E
Sbjct: 570 AHPDVFNLLLQVMDHGSLTDNNGRKADFRNIILVMTTNAGAEE 612
>gi|119476168|ref|ZP_01616520.1| ATP-binding protease component ClpA [marine gamma proteobacterium
HTCC2143]
gi|119450795|gb|EAW32029.1| ATP-binding protease component ClpA [marine gamma proteobacterium
HTCC2143]
Length = 759
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDF 70
+++ LE+ LK V GQ+ AIS + A+K K + + L G G GK VT+
Sbjct: 453 SLKKLEDNLKMVVFGQDKAISTLATAIKMARAGLKAVEKPIGSFLLAGPTGVGKTEVTNQ 512
Query: 71 IVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+ + S ++ + SR+ +V + L + +VT ++ + D
Sbjct: 513 LAKILGLELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTESVTKHPHSVVLLD 569
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
E++K + ++++ +DH + + + F+N IF+ +N+G +
Sbjct: 570 EIEKAHPEVFNLLLQVMDHGTLTDNNGRKADFRNVIFIMTTNAGAESV 617
>gi|403388385|ref|ZP_10930442.1| ATPase AAA-2 domain-containing protein [Clostridium sp. JC122]
Length = 867
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LEE+L++ V GQE A + + A L+ + N + G G GK + + +
Sbjct: 569 LEEELQKRVVGQEEATNAVSNAVLRARAGLKDPNRPIGSFIFLGPTGVGKTELAKTLARN 628
Query: 75 IFKRYKD---KGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFIFD 129
+F ++ S ++ K++ SR+ P +V QLT + N ++ +FD
Sbjct: 629 LFDSEENIVRIDMSEYMEKYSVSRLIGPPPGYVGYEEGGQLTEAVRRN----PYSVILFD 684
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM 174
E++K + + ++ + +D + + + F+NTI + SN G + ++
Sbjct: 685 EIEKAHEDVFNIFLQILDDGRLTDNKGKTVDFKNTIIIMTSNLGSSYLL 733
>gi|209545020|ref|YP_002277249.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532697|gb|ACI52634.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
Length = 778
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 460 LRTLERDLKGMVYGQDRAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 519
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 520 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 576
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 577 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 623
>gi|162149244|ref|YP_001603705.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787821|emb|CAP57419.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Gluconacetobacter diazotrophicus PAl 5]
Length = 778
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 460 LRTLERDLKGMVYGQDRAIEALTAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 519
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 520 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 576
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K + L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 577 IEKAHQDLYNVLLQVMDHGRLTDHNGKTVDFRNVVLIMTTNAGAADL 623
>gi|419603938|ref|ZP_14138414.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9853]
gi|380581217|gb|EIB02945.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9853]
Length = 857
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419548162|ref|ZP_14086793.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2685]
gi|380527789|gb|EIA53138.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2685]
Length = 857
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|118591080|ref|ZP_01548479.1| endopeptidase Clp ATP-binding chain A [Stappia aggregata IAM 12614]
gi|118436156|gb|EAV42798.1| endopeptidase Clp ATP-binding chain A [Stappia aggregata IAM 12614]
Length = 815
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 6 KFIQSSNVRVLE---EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 61
K + + VLE + LK+ V+GQ+ AI + A+K K + L P G
Sbjct: 450 KSVSKDDAEVLENLGKDLKRVVYGQDEAIGTLASAIKLARAGLREPDKPIGSYLFSGPTG 509
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 120
GK V + SS+ S ++ + SR+ +V + L + V
Sbjct: 510 VGKTEVARQLASSLGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 566
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ + DE++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 567 HPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADM 623
>gi|386332649|ref|YP_006028818.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum Po82]
gi|334195097|gb|AEG68282.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum Po82]
Length = 762
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 70 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMN 614
>gi|83746256|ref|ZP_00943309.1| Hypothetical Protein RRSL_03844 [Ralstonia solanacearum UW551]
gi|207742559|ref|YP_002258951.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum IPO1609]
gi|300703255|ref|YP_003744857.1| ATP-dependent clp protease ATP-binding subunit Clpa [Ralstonia
solanacearum CFBP2957]
gi|421891031|ref|ZP_16321861.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum K60-1]
gi|421897593|ref|ZP_16327961.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum MolK2]
gi|83727006|gb|EAP74131.1| Hypothetical Protein RRSL_03844 [Ralstonia solanacearum UW551]
gi|206588799|emb|CAQ35762.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum MolK2]
gi|206593952|emb|CAQ60879.1| atp-dependent protease (atp-binding specificity subunit) protein
[Ralstonia solanacearum IPO1609]
gi|299070918|emb|CBJ42222.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum CFBP2957]
gi|378963617|emb|CCF98609.1| ATP-dependent Clp protease ATP-binding subunit clpA [Ralstonia
solanacearum K60-1]
Length = 762
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 11 SNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTD 69
S ++ LE LK V GQ+ AI + A+K K + L P G GK V
Sbjct: 448 SKLQTLERDLKSVVFGQDPAIDALASAIKMSRAGLGKTDKPIGSFLFSGPTGVGKTEVAK 507
Query: 70 ---FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIF 126
FI+ R+ D H + I P +V + L I+ C +
Sbjct: 508 QLAFILGIELIRF-DMSEYMERHAVSRLIGAP-PGYVGFDQGGLLTEAITKKPHC---VL 562
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
+ DE++K + ++++ +DH A+ + + F+N I + +N+G E MN
Sbjct: 563 LLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFRNVIIIMTTNAGA-ETMN 614
>gi|419555661|ref|ZP_14093673.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
84-2]
gi|419561873|ref|ZP_14099401.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1091]
gi|419565907|ref|ZP_14103175.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1148]
gi|419573045|ref|ZP_14109856.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1891]
gi|419593019|ref|ZP_14128255.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9854]
gi|380535939|gb|EIA60610.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
84-2]
gi|380542514|gb|EIA66747.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1091]
gi|380547899|gb|EIA71813.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1148]
gi|380552317|gb|EIA75878.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1891]
gi|380571421|gb|EIA93811.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9854]
Length = 857
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419536439|ref|ZP_14075920.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
111-3]
gi|419540609|ref|ZP_14079843.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z163]
gi|419542751|ref|ZP_14081865.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2548]
gi|419568320|ref|ZP_14105460.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1417]
gi|419569871|ref|ZP_14106927.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
7--1]
gi|419571785|ref|ZP_14108728.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
132-6]
gi|419577800|ref|ZP_14114344.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
59-2]
gi|419580523|ref|ZP_14116845.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1957]
gi|419582752|ref|ZP_14118946.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1961]
gi|419585073|ref|ZP_14121136.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
202/04]
gi|419587000|ref|ZP_14122953.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
67-8]
gi|419606590|ref|ZP_14140950.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9860]
gi|419616514|ref|ZP_14150161.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z156]
gi|380516375|gb|EIA42508.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z163]
gi|380518207|gb|EIA44306.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
111-3]
gi|380522090|gb|EIA47783.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2548]
gi|380545878|gb|EIA69844.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1417]
gi|380548686|gb|EIA72585.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
7--1]
gi|380552909|gb|EIA76451.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
132-6]
gi|380556453|gb|EIA79704.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
59-2]
gi|380560564|gb|EIA83634.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1957]
gi|380562981|gb|EIA85828.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
202/04]
gi|380564533|gb|EIA87337.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1961]
gi|380565452|gb|EIA88188.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
67-8]
gi|380586748|gb|EIB08021.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 9860]
gi|380595552|gb|EIB16282.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
Z156]
Length = 857
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|114328415|ref|YP_745572.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Granulibacter
bethesdensis CGDNIH1]
gi|114316589|gb|ABI62649.1| ATP-dependent clp protease ATP-binding subunit clpA [Granulibacter
bethesdensis CGDNIH1]
Length = 851
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 530 LRTLERDLKAMVFGQDKAIEALSAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVARQL 589
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 590 ATTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 646
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
V+K L ++++ +DH + + + F+N I + +N+G +++
Sbjct: 647 VEKAHPDLYNILLQVMDHGKLTDHNGKIVDFRNVILIMTTNAGASDM 693
>gi|453329787|dbj|GAC88035.1| Clp protease ATP-binding subunit ClpA [Gluconobacter thailandicus
NBRC 3255]
Length = 770
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 618
>gi|414341665|ref|YP_006983186.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
oxydans H24]
gi|411027000|gb|AFW00255.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
oxydans H24]
Length = 769
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 618
>gi|357639453|ref|ZP_09137326.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|418417014|ref|ZP_12990212.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
gi|357587907|gb|EHJ57315.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|410873070|gb|EKS21006.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
Length = 813
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQ+ A+S I A++ N R + G G GK + +
Sbjct: 510 LEKELHKRVIGQDDAVSAISKAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEV 569
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIF 126
+F R+ S ++ KF SR++ +V +LT + +N ++
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNN----PYSVL 622
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+FDEV+K + +V++ +D + + ++ F NTI + SN G T I
Sbjct: 623 LFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAI 673
>gi|95930478|ref|ZP_01313214.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
gi|95133518|gb|EAT15181.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
Length = 754
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +L+Q V GQ+ AI + ++ H + L P G GK V +
Sbjct: 452 LERKLRQQVFGQDPAIHQVVRSILRARAGLGHPEHPIGSFLFAGPTGVGKTEVARQLAQQ 511
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ + S ++ K + +R+ +V + L + V + + DE++K
Sbjct: 512 LGVAFTRFDMSEYMEKHSVARLIGAPPGYVGFDQGGL---LTDAVIKKPHTVLLLDEIEK 568
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +DH ++ + F+N I + SN+G E+ T
Sbjct: 569 AHPDLFNILLQIMDHGSLTDNNGKVADFRNVILIMTSNAGARELSTT 615
>gi|340504783|gb|EGR31198.1| hypothetical protein IMG5_116250 [Ichthyophthirius multifiliis]
Length = 546
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 45/156 (28%)
Query: 40 NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVH---------- 89
N +N + +K + L G PGTGK + + ++ K SRF+
Sbjct: 5 NQIKNTHARSKGFILLLQGPPGTGKTSIAKAVAKALQKE------SRFISFAGISDPSFF 58
Query: 90 KFNSRIHFPNENHV---SLYRLQLTNWIISNVTACDRAIFIFDEVDKFPK---------G 137
K + R + ++ V L + Q N +FI DE+DK +
Sbjct: 59 KGHRRTYVDSQPGVFVKELIKAQTMN-----------PVFILDEIDKISRSGMGADPYYS 107
Query: 138 LLDVIIP-----FIDHHAVYNQISFQNTIFLFLSNS 168
L++++ P F DH+ +I F N+IF+ +N+
Sbjct: 108 LMEILNPEENSNFTDHYMDI-KIDFSNSIFILTANN 142
>gi|339017693|ref|ZP_08643843.1| Clp protease ATP-binding subunit ClpA [Acetobacter tropicalis NBRC
101654]
gi|338753239|dbj|GAA07147.1| Clp protease ATP-binding subunit ClpA [Acetobacter tropicalis NBRC
101654]
Length = 785
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 464 LRALERDLKGMVFGQDQAIETLSAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVARQL 523
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 524 ASTLGIELIRFDMSEYMERHSISRLLGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 580
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 581 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 627
>gi|330836209|ref|YP_004410850.1| ATP-dependent chaperone ClpB [Sphaerochaeta coccoides DSM 17374]
gi|329748112|gb|AEC01468.1| ATP-dependent chaperone ClpB [Sphaerochaeta coccoides DSM 17374]
Length = 868
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 14 RVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIV 72
R LE+ L + V GQ+ AIS + A++ + + L L P G GK + +
Sbjct: 563 RNLEKILSEKVIGQDAAISAVAHAIRRNKAGIGDEHRPLGTFLFAGPTGVGKTELAKVLA 622
Query: 73 SSIF---KRYKDKGTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIFI 127
S +F K S ++ K++ SR+ +V + QLT + ++ +
Sbjct: 623 SFLFDDEKALTRIDMSEYMEKYSVSRLIGAPPGYVGYDQGGQLTEIVRRR----PYSVIL 678
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
FDEV+K + +V++ D + + + F NTI + SN G +I LE R +
Sbjct: 679 FDEVEKAHPDVFNVLLQVFDDGRLTDGQGRVVDFTNTIIIMTSNLGSQQI----LEARSA 734
Query: 184 E 184
E
Sbjct: 735 E 735
>gi|350566578|ref|ZP_08935234.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Peptoniphilus
indolicus ATCC 29427]
gi|348662563|gb|EGY79222.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Peptoniphilus
indolicus ATCC 29427]
Length = 815
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
L+ LK V GQ+ AI+ + A+K K + + G G GK Y+ + +
Sbjct: 497 LDANLKSRVKGQDEAINSVSKAIKRARIGLKDPNKPIGSFIFVGPTGVGKTYLAKSLSNE 556
Query: 75 IF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+F Y +K T ++ V + + QLTN + SN
Sbjct: 557 LFGSEDNLLRIDMSEYMEKHTVAKLVGSPPGYVGYDEGG-------QLTNAVRSN----P 605
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
+ +FDE++K + ++++ +D + + +SF++T+ + SN G + + N
Sbjct: 606 YTVVLFDEIEKAHPDVFNILLQILDEGRLTDSKGRTVSFKDTVIIMTSNVGASRLRN 662
>gi|386814542|ref|ZP_10101760.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thiothrix
nivea DSM 5205]
gi|386419118|gb|EIJ32953.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thiothrix
nivea DSM 5205]
Length = 762
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 6 KFIQSSNVRVL---EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 61
K + +S+++VL E LK + GQ+ AI + A+K ++K + + P G
Sbjct: 449 KSVSTSDMQVLRNLERDLKMVIFGQDKAIDQLTTAIKMARSGLRDDSKPIGSFMFAGPTG 508
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 120
GK V+ + + S ++ + SR+ +V L + V
Sbjct: 509 VGKTEVSKQLAQRLGIELLRFDMSEYMERHTVSRLIGAPPGYVGYDEGGL---LTDAVNK 565
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
A+ + DE++K + ++++ +DH + + +I F+N I + SN+G I
Sbjct: 566 HPHAVLLLDEIEKAHPDVFNILLQVMDHGTLTDANGRKIDFRNVILIMTSNAGAENI 622
>gi|363900249|ref|ZP_09326755.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|395209804|ref|ZP_10398832.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
gi|361957103|gb|EHL10415.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|394704789|gb|EJF12321.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
Length = 863
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+ S V L+E++ + + GQE A+ +C A+ TK + L G G GK +
Sbjct: 556 ERSKVLHLDEEIHKRLIGQEEAVEKVCEAILRSKAGIKDPTKPIGSFLFLGPTGVGKTEL 615
Query: 68 TDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACD 122
+ ++F S ++ K++ SR+ +V QLT V
Sbjct: 616 AKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGYVGYEEGGQLT----EAVRRKP 671
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFL 178
A+ +FDE++K + ++++ +D + + I F+NTI + SN G +++
Sbjct: 672 YAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTIDFKNTIIILTSNIGAQSLLDGIK 731
Query: 179 E 179
E
Sbjct: 732 E 732
>gi|58697295|ref|ZP_00372662.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila simulans]
gi|58536343|gb|EAL59819.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila simulans]
Length = 377
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ L+ L++ + GQE AI + ++K + K LA L P G GK + +
Sbjct: 78 VKSLKANLEKVIFGQEQAIESLVNSIKIAKSGLRNYNKPLANYLFAGPTGVGKTELAKQL 137
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
S+ S ++ H + I P +V + L +SN ++ + D
Sbjct: 138 AESMGMNLIRFDMSEYIESHTISRMIGSP-PGYVGYDQGGLLTESVSN---NQYSVVLLD 193
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
E++K + ++++ +D+ V + +++F N I + +N+G E +F+
Sbjct: 194 EIEKAHSDIYNILLQIMDYGCVTDTYGRKVNFSNIILIMTTNAGAAERSKSFV 246
>gi|42521034|ref|NP_966949.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|42410775|gb|AAS14883.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 768
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ L+ L++ + GQE AI + ++K + K LA L P G GK + +
Sbjct: 469 VKSLKANLEKVIFGQEQAIESLVNSIKIAKSGLRNYNKPLANYLFAGPTGVGKTELAKQL 528
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
S+ S ++ H + I P +V + L +SN ++ + D
Sbjct: 529 AESMGMNLIRFDMSEYIESHTISRMIGSP-PGYVGYDQGGLLTESVSN---NQYSVVLLD 584
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
E++K + ++++ +D+ V + +++F N I + +N+G E +F+
Sbjct: 585 EIEKAHSDIYNILLQIMDYGCVTDTYGRKVNFSNIILIMTTNAGAAERSKSFV 637
>gi|313887926|ref|ZP_07821605.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312846092|gb|EFR33474.1| negative regulator of genetic competence ClpC/MecB [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 821
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
+R L+ +LK+ V GQ+ A+ + A+K + + N + G G GK Y+ +
Sbjct: 495 LRDLDIKLKEDVKGQDQAVKSLAKAIKRSRIGLKDPNKPIGSFIFVGPTGVGKTYLAKSL 554
Query: 72 VSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIISNVTACDRAIF 126
++F + ++ S ++ KF SR+ +V +LT + +N ++
Sbjct: 555 AKNLFGKEENMIRFDMSEYMEKFTVSRLVGSPPGYVGYEEGGELTEAVRTN----PYSVI 610
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIM-NTFLELR 181
+ DE++K + ++++ +D + + ++F++T+ + SN+G + N+ L
Sbjct: 611 LLDEIEKAHPDIFNILLQILDEGRLTDSKGRTVNFKDTVIIMTSNAGANLLAKNSVLGFS 670
Query: 182 KSE 184
SE
Sbjct: 671 TSE 673
>gi|365851807|ref|ZP_09392222.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
gi|363715748|gb|EHL99171.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
Length = 830
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE+ L Q V GQE AIS + +++ + + + L G G GK + + +
Sbjct: 514 LEKVLHQRVVGQEEAISAVSRSIRRARSGLKDPNRPIGSFMLLGPTGVGKTELAKAVAEA 573
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+F D S ++ K++ SR+ +V QLT V ++ +FD
Sbjct: 574 VFGSEDDMIRVDMSEYMEKYSTSRLIGSAPGYVGYDEGGQLT----EKVRQKPYSVVLFD 629
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
EV+K + ++++ +D + + +I F+NT+ + SN G T +
Sbjct: 630 EVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNLGATTL 677
>gi|229496454|ref|ZP_04390170.1| ClpB protein [Porphyromonas endodontalis ATCC 35406]
gi|229316682|gb|EEN82599.1| ClpB protein [Porphyromonas endodontalis ATCC 35406]
Length = 831
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 20/187 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
+E+ L+Q V GQ+ AI + A+ + + + G GTGK + + +
Sbjct: 530 MEDILRQRVVGQDNAIRSVTDAILESRSGMNKPGQPIGSFFFLGPTGTGKTELAKTLAEA 589
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWI--------ISNVTACDRAIF 126
+F +K RF F E+ +L ++ ++ + A+
Sbjct: 590 LFN--DEKAMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQQPYAVV 642
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTEIMNTFLELRK 182
+FDE++K + D+ + +D +++++ F N I +F SN G + E R+
Sbjct: 643 LFDEIEKAHPSVYDIFLQIMDEGKLHDRLGKEGDFSNAIIIFTSNVGSEWVAKELSEGRQ 702
Query: 183 SECIEFI 189
++ +
Sbjct: 703 PTTLQMM 709
>gi|268680245|ref|YP_003304676.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
gi|268618276|gb|ACZ12641.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
Length = 732
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE LK + GQ+ AI +C A+K + T + L P G GK V +
Sbjct: 439 LEAHLKAKIFGQDRAIEALCKAIKRSRAGLGNPTSPIGSFLFAGPTGVGKTEVAKQLAYE 498
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ ++ S ++ K SR+ +V + I C + + DE++K
Sbjct: 499 LGVHFERYDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLSEAIKKHPYC---VLLLDEIEK 555
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
+L++++ D + + +I F+N I + SN G E
Sbjct: 556 AHPDMLNILLQIFDSATLTDNNGTKIDFRNVIIIMTSNLGTKE 598
>gi|386827843|ref|ZP_10114950.1| ATP-dependent Clp protease ATP-binding subunit clpA [Beggiatoa alba
B18LD]
gi|386428727|gb|EIJ42555.1| ATP-dependent Clp protease ATP-binding subunit clpA [Beggiatoa alba
B18LD]
Length = 764
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE LK V GQ+ AIS + A+K H K + + L G G GK VT +
Sbjct: 455 LERDLKMVVFGQDEAISTLSAAIKMSRSGLGHQEKPIGSYLLAGPTGVGKTEVTRQLARI 514
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + + A+ + DE++K
Sbjct: 515 LGIELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEAINKHPHAVLLLDEIEK 571
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH A+ + + F+N + + +N+G ++
Sbjct: 572 AHPDVFNLLLQVMDHGALTDTNGRKTDFRNVMIIMTTNAGAEQV 615
>gi|296533023|ref|ZP_06895671.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Roseomonas
cervicalis ATCC 49957]
gi|296266652|gb|EFH12629.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Roseomonas
cervicalis ATCC 49957]
Length = 790
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQ+ AI + A+K K + L P G GK V +
Sbjct: 464 LRNLERDLKAMVFGQDQAIDALSAAIKLSRAGLRDPEKPIGNYLFSGPTGVGKTEVAKQL 523
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ S ++ + + SR+ +V + L + ++ A+ + DE
Sbjct: 524 AKTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDSIDQHPHAVLLLDE 580
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFL----ELRK 182
++K + L ++++ +DH + + + F+N I + +N+G ++ + + E RK
Sbjct: 581 IEKAHQDLYNILLQVMDHGKLTDHNGKTVDFRNVILIMTTNAGAADMAKSGIGFGREERK 640
Query: 183 SE 184
E
Sbjct: 641 GE 642
>gi|389695647|ref|ZP_10183289.1| ATP-dependent Clp protease ATP-binding subunit clpA [Microvirga sp.
WSM3557]
gi|388584453|gb|EIM24748.1| ATP-dependent Clp protease ATP-binding subunit clpA [Microvirga sp.
WSM3557]
Length = 821
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L++ LK+ V+GQ+ AI + A+K K + L P G GK V + +S
Sbjct: 466 LQDTLKRVVYGQDKAIEALSSAIKLARAGLRDAEKPIGSYLFAGPTGVGKTEVAKQLAAS 525
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 526 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 582
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 583 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTTNAGAADM 626
>gi|58698417|ref|ZP_00373328.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630896|ref|YP_002727687.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia sp.
wRi]
gi|58535072|gb|EAL59160.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225592877|gb|ACN95896.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Wolbachia sp.
wRi]
Length = 768
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
V+ L+ L++ + GQE AI + ++K + K LA L P G GK + +
Sbjct: 469 VKSLKANLEKVIFGQEQAIESLVNSIKIAKSGLRNYNKPLANYLFAGPTGVGKTELAKQL 528
Query: 72 VSSIFKRYKDKGTSRFV--HKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
S+ S ++ H + I P +V + L +SN ++ + D
Sbjct: 529 AESMGMNLIRFDMSEYIESHTISRMIGSP-PGYVGYDQGGLLTESVSN---NQYSVVLLD 584
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFL 178
E++K + ++++ +D+ V + +++F N I + +N+G E +F+
Sbjct: 585 EIEKAHSDIYNILLQIMDYGCVTDTYGRKVNFSNIILIMTTNAGAAERSKSFV 637
>gi|160895376|ref|ZP_02076146.1| hypothetical protein CLOL250_02934 [Clostridium sp. L2-50]
gi|156862947|gb|EDO56378.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. L2-50]
Length = 817
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 9 QSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYV 67
+S + LEE+L + V GQ A+ + A+K + + L G G GK +
Sbjct: 499 ESKRLERLEEELHKRVVGQNEAVDAVAKAIKRSRVGLKDPKRPVGSFLFLGPTGVGKTEL 558
Query: 68 TDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 115
+ + ++F Y +K S+ + + F QL+ +
Sbjct: 559 SKALAEAVFGSEDALIRVDMSEYMEKHSVSKLIGSPPGYVGFEEGG-------QLSEKVR 611
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGT 171
SN ++ +FDE++K + ++++ +D + + ++ F+NTI + SN+G
Sbjct: 612 SN----PYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNTGAQ 667
Query: 172 EIMN 175
I++
Sbjct: 668 RIID 671
>gi|219113211|ref|XP_002186189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583039|gb|ACI65659.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 997
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEIMN 175
A+ +FDE++K + +V++ +D + N ++F+NTI +F SN G EI++
Sbjct: 785 AVLLFDEMEKAHPDVFNVMLQLLDDGRLTDSKGNTVNFRNTICIFTSNVGSQEILD 840
>gi|39936210|ref|NP_948486.1| endopeptidase Clp ATP-binding subunit A [Rhodopseudomonas palustris
CGA009]
gi|192291926|ref|YP_001992531.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Rhodopseudomonas palustris TIE-1]
gi|39650065|emb|CAE28588.1| endopeptidase Clp: ATP-binding chain A [Rhodopseudomonas palustris
CGA009]
gi|192285675|gb|ACF02056.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Rhodopseudomonas palustris TIE-1]
Length = 794
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + S+
Sbjct: 460 LEQTLKRVVFGQDKAIEALSASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAST 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L +V++ +DH + + Q++F+N I + +N+G ++
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADL 620
>gi|410996691|gb|AFV98156.1| hypothetical protein B649_09220 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 726
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V GQ+ AI + ++K F K +A L P G GK + + +
Sbjct: 436 LESELKALVIGQDQAIEQVVKSIKRSFAGLSAVHKPIASFLFSGPTGVGKTELAKSLAET 495
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ ++ S ++ K SR+ +V + L ++ V + + DE++K
Sbjct: 496 MGIYFERFDMSEYMEKHALSRLIGAPPGYVGFEQGGL---LVETVRKHPYMVLLLDEIEK 552
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQ----NTIFLFLSNSGGTE 172
L++V++ +D + + F+ N + + SN G +E
Sbjct: 553 AHPDLINVLLQVMDSATLTDNTGFKANFANVVLVMTSNIGASE 595
>gi|410944560|ref|ZP_11376301.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Gluconobacter
frateurii NBRC 101659]
Length = 770
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE L+ V GQ+ AI + A+K K + L P G GK V +
Sbjct: 455 LRHLERDLRNMVFGQDKAIDALAAAIKLSRAGLRDMEKPIGNYLFSGPTGVGKTEVAKQL 514
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
SS+ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 515 ASSLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 571
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N I + +N+G ++
Sbjct: 572 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADL 618
>gi|392330339|ref|ZP_10274954.1| hypothetical protein SCAZ3_00280 [Streptococcus canis FSL Z3-227]
gi|391418018|gb|EIQ80830.1| hypothetical protein SCAZ3_00280 [Streptococcus canis FSL Z3-227]
Length = 617
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL---KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIV 72
L+E+L V GQE AI I A+ + Q+ N + G G GK ++ +
Sbjct: 292 LKEKLMNRVKGQEDAIDAIVDAVTIAQAGLQDE--NKPISSFMFLGPTGVGKTELSKALA 349
Query: 73 SSIFKRYKDKGTSRF-VHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++F + RF + +F + N + + QLT + C + + D
Sbjct: 350 EALFD--DENAMIRFDMSEFKEKEDAAKLIGNRATKTKGQLTQ-AVKQKPYC---VVLLD 403
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
EV+K +LD+ + +D + + ISF+NTI + +N G +I+N + EL+ S
Sbjct: 404 EVEKADGEVLDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTNIGAKKIINKW-ELKGS 460
>gi|254420804|ref|ZP_05034528.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
sp. BAL3]
gi|196186981|gb|EDX81957.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Brevundimonas
sp. BAL3]
Length = 767
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVT 68
+ ++R LE LK+ V GQE AI + A+K K + L P G GK V
Sbjct: 453 TESLRELEVDLKRAVFGQEQAIEQVSAAMKLARAGLRDPNKPIGSFLFSGPTGVGKTEVA 512
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ S++ + S ++ + SR+ +V + L + V ++ +
Sbjct: 513 KQLASTLGIEMQRFDMSEYMERHTVSRLIGAPPGYVGHDQGGL---LTDAVDQHPHSVVL 569
Query: 128 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTE 172
DE++K + ++++ +D+ AV ++ F+N I + +N+G +
Sbjct: 570 LDEIEKAHPDVYNILLQVMDNGMLTDAVGKKVDFRNVILIMTTNAGAAD 618
>gi|419665686|ref|ZP_14195747.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|419681645|ref|ZP_14210468.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|419686483|ref|ZP_14214915.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1798]
gi|380642775|gb|EIB60025.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|380657487|gb|EIB73553.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|380664417|gb|EIB80019.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 1798]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419658027|ref|ZP_14188666.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|380633944|gb|EIB51863.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1997-1]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|254502453|ref|ZP_05114604.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Labrenzia
alexandrii DFL-11]
gi|222438524|gb|EEE45203.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Labrenzia
alexandrii DFL-11]
Length = 799
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 6 KFIQSSNVRVLE---EQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 61
K + + VLE + LK+ V+GQ+ AI + A+K K + L P G
Sbjct: 435 KSVSKDDAEVLENLGKDLKRVVYGQDNAIETLASAIKLARAGLREPDKPIGSYLFSGPTG 494
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 120
GK V + SS+ S ++ + SR+ +V + L + V
Sbjct: 495 VGKTEVARQLASSMGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQ 551
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ + DE++K L ++++ +DH + + Q+ F+N I + +N+G ++
Sbjct: 552 HPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGAADM 608
>gi|421599133|ref|ZP_16042403.1| ClpA-like protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404268754|gb|EJZ33164.1| ClpA-like protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 623
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+ AI + ++K K + L P G GK V + ++
Sbjct: 460 LEQTLKRTVFGQDKAIESLAASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLAAT 519
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 520 LGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 576
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
L +V++ +DH + + Q++F+N I + +N+G ++
Sbjct: 577 AHPDLYNVLLQIMDHGRLTDHNGKQVNFRNVILIMTTNAGAADL 620
>gi|398831773|ref|ZP_10589949.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Phyllobacterium sp. YR531]
gi|398211475|gb|EJM98093.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Phyllobacterium sp. YR531]
Length = 822
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK+ V+GQ+LAI + ++K K + L P G GK V + +S
Sbjct: 464 LEAELKRVVYGQDLAIEALSSSIKLARAGLREPEKPIGSYLFSGPTGVGKTEVAKQLAAS 523
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 524 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 580
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN 167
L ++++ +DH + + QI F+N I + +N
Sbjct: 581 AHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTN 618
>gi|419694075|ref|ZP_14222048.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|380671372|gb|EIB86588.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419622189|ref|ZP_14155429.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23216]
gi|380600168|gb|EIB20512.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23216]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMVRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|424846956|ref|ZP_18271540.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni NW]
gi|356485553|gb|EHI15545.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni NW]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|315124037|ref|YP_004066041.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315017759|gb|ADT65852.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|296116797|ref|ZP_06835403.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter hansenii ATCC 23769]
gi|295976598|gb|EFG83370.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Gluconacetobacter hansenii ATCC 23769]
Length = 779
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V+GQ+ AI + A+K K + L P G GK V +
Sbjct: 459 LRSLERDLKGMVYGQDKAIEALTAAIKLSRAGLRDAEKPIGNYLFSGPTGVGKTEVAKQL 518
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
S++ S ++ + + SR+ +V + L + + A+ + DE
Sbjct: 519 ASTLGIELIRFDMSEYMERHSISRLIGAPPGYVGFDQGGL---LTDAIDQHPHAVLLLDE 575
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L +V++ +DH + + + F+N + + +N+G ++
Sbjct: 576 IEKAHPDLYNVLLQVMDHGRLTDHNGKTVDFRNVMLIMTTNAGAADL 622
>gi|283955934|ref|ZP_06373424.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792594|gb|EFC31373.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 1336]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|157414793|ref|YP_001482049.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81116]
gi|384441148|ref|YP_005657451.1| Chaperone protein clpB [Campylobacter jejuni subsp. jejuni M1]
gi|415746145|ref|ZP_11475300.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 327]
gi|157385757|gb|ABV52072.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|307747431|gb|ADN90701.1| Chaperone protein clpB [Campylobacter jejuni subsp. jejuni M1]
gi|315931705|gb|EFV10660.1| chaperone protein clpB [Campylobacter jejuni subsp. jejuni 327]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|148925882|ref|ZP_01809569.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|145844868|gb|EDK21972.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8486]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|86151601|ref|ZP_01069815.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153521|ref|ZP_01071725.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85841230|gb|EAQ58478.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843247|gb|EAQ60458.1| chaperone clpB [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 857
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|255321467|ref|ZP_05362625.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Campylobacter
showae RM3277]
gi|255301323|gb|EET80582.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Campylobacter
showae RM3277]
Length = 721
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVT 68
++N++ L ++LK + GQ+ A+ + A+K + + + L G G GK+ ++
Sbjct: 422 AANLKNLAQRLKSEIFGQDEAVDTLVAAIKRSYAGLKQPNAPVGVFLFTGSSGVGKSELS 481
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN-VTACDRAIF 126
+ ++ ++ S ++ K + SR+ +V I++N V ++
Sbjct: 482 AALARNLGVHFERFDMSEYMEKHSVSRLIGAPPGYVGFEE----GGILTNAVKKHPYSVI 537
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSGGTE 172
+FDE++K +++V + D ++ + F+N + + SN G E
Sbjct: 538 LFDEIEKASDEMINVFLQIFDGASLTDNTGAKSDFRNAVIIMSSNLGSKE 587
>gi|121613623|ref|YP_001000212.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005168|ref|ZP_02270926.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87250327|gb|EAQ73285.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 857
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|84500106|ref|ZP_00998372.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Oceanicola
batsensis HTCC2597]
gi|84392040|gb|EAQ04308.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Oceanicola
batsensis HTCC2597]
Length = 776
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE+ LK+ V GQ+LAI + A+K K + L P G GK V + S
Sbjct: 465 LEQTLKRVVFGQDLAIESLSSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLADS 524
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ K SR+ +V + L + V + + DE++K
Sbjct: 525 LGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL---LTDGVDQHPHCVLLLDEIEK 581
Query: 134 FPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNT 176
+ ++++ +D+ + + ++F+N I + SN+G +E+ +
Sbjct: 582 AHPDVYNILLQVMDNGQLTDHNGRTVNFRNVILIMTSNAGASELAKS 628
>gi|419641014|ref|ZP_14172926.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23357]
gi|380618345|gb|EIB37476.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni LMG 23357]
Length = 857
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|384447792|ref|YP_005655843.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|284925775|gb|ADC28127.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni IA3902]
Length = 857
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|206889861|ref|YP_002248498.1| hypothetical protein THEYE_A0656 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741799|gb|ACI20856.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 135
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 54 ISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNEN--HVSLYRL--- 108
I+L+G GTGK +T I S+ KD +S FV H+P N H+ LYRL
Sbjct: 30 IALYGEMGTGKTVLTKGIASAFGIEEKDIASSSFV----IVSHYPEANFYHIDLYRLDNV 85
Query: 109 ---QLTNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH 148
+ W + C I +++ P+ L + I +D
Sbjct: 86 KEEDIDLWEYFELGTC--VIEWAQSINELPENALKITIDLVDE 126
>gi|205355368|ref|ZP_03222139.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|384442843|ref|YP_005659095.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni S3]
gi|205346602|gb|EDZ33234.1| ATP-dependent CLp protease ATP-binding subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|315057930|gb|ADT72259.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni S3]
Length = 857
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|291521121|emb|CBK79414.1| DNA polymerase III, delta' subunit [Coprococcus catus GD/7]
Length = 329
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 26 GQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSIF--KRYKDK- 82
G E I H ALKNH + A L+G G+GKN + ++ Y D
Sbjct: 9 GHEQIIEHFRSALKNH-------QVSHAYILNGENGSGKNMLAKAFAKALVCEAGYGDSC 61
Query: 83 GTSRFVHKFNSRIH---------FPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
R H+F+S H N V R Q+ N I+ + ++I DE +K
Sbjct: 62 NMCRACHQFDSGNHPDVKWITHEKANSIGVDEVREQINNDIVIKPYSSKYKVYIIDEAEK 121
Query: 134 FPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSECI 186
+ ++ I+ Y + LFL+N+ ++ L+ +S CI
Sbjct: 122 MTVQAQNALLKTIEEPPEY-------AVILFLTNT-----LDVLLQTVRSRCI 162
>gi|146319629|ref|YP_001199341.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|253752626|ref|YP_003025767.1| stress response-related Clp ATPase [Streptococcus suis SC84]
gi|253754452|ref|YP_003027593.1| stress response-related Clp ATPase [Streptococcus suis P1/7]
gi|253756385|ref|YP_003029525.1| stress response-related Clp ATPase [Streptococcus suis BM407]
gi|386578782|ref|YP_006075188.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|386582931|ref|YP_006079335.1| ATPase [Streptococcus suis SS12]
gi|386589054|ref|YP_006085455.1| ATPase [Streptococcus suis A7]
gi|389857491|ref|YP_006359734.1| ATPase [Streptococcus suis ST1]
gi|403062391|ref|YP_006650607.1| ATPase [Streptococcus suis S735]
gi|145690435|gb|ABP90941.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|251816915|emb|CAZ52564.1| putative stress response-related Clp ATPase [Streptococcus suis
SC84]
gi|251818849|emb|CAZ56692.1| putative stress response-related Clp ATPase [Streptococcus suis
BM407]
gi|251820698|emb|CAR47460.1| putative stress response-related Clp ATPase [Streptococcus suis
P1/7]
gi|292559245|gb|ADE32246.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|353735077|gb|AER16087.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis SS12]
gi|353741209|gb|AER22216.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis ST1]
gi|354986215|gb|AER45113.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis A7]
gi|402809717|gb|AFR01209.1| ATPase [Streptococcus suis S735]
Length = 817
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE AIS + A+ +N R + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKTELAKALAEI 569
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + +V++ +D + + ++ F NT+ + SN G T +
Sbjct: 624 FDEVEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATAL 673
>gi|345880320|ref|ZP_08831874.1| hypothetical protein HMPREF9431_00538 [Prevotella oulorum F0390]
gi|343923518|gb|EGV34205.1| hypothetical protein HMPREF9431_00538 [Prevotella oulorum F0390]
Length = 853
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTG 63
D++++ +R + EQLKQ+V Q+ AI + A+ +N + N A G G G
Sbjct: 525 DEYVR---LRQMPEQLKQYVIAQDTAIEKMAKAIQRNRVGIKDPNHPIGAFMFLGPTGVG 581
Query: 64 KNYVTDFIVSSIFKRYKDKG-----TSRFVHKFN-SRIHFPNENHVSLYR-LQLTNWIIS 116
K Y+ + +F D S + FN SR+ +V QLT
Sbjct: 582 KTYLAKQLAHYMFG--SDDALIRIDMSEYAESFNASRLIGAPPGYVGYEEGGQLT----E 635
Query: 117 NVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
V +I + DE++K + ++++ +D + + ++ F+NT+ + SN+G +
Sbjct: 636 RVRRHPYSIVLLDEIEKAHASIYNLLLQVLDEGRLTDGNGRKVDFRNTVIIMTSNTGTRQ 695
Query: 173 I 173
+
Sbjct: 696 L 696
>gi|3063758|emb|CAA73776.1| heat shock protein [Campylobacter jejuni]
Length = 857
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGKLLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|301312189|ref|ZP_07218108.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
gi|300829864|gb|EFK60515.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
Length = 827
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
+EE L++ V GQ+ A+ + A+ + + + L G GTGK + + +
Sbjct: 530 MEEYLRRRVVGQDQALKTLTDAILESRSGMNKPGQPIGSFFLLGPTGTGKTELAKALAEA 589
Query: 75 IFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYR--------LQLTNWIISNVTACDRAIF 126
+F +K RF F E+ +L + +++ + A+
Sbjct: 590 LFN--DEKSMIRF-----DMSEFKEEHSAALLYGAPPGYVGYEEGGMLVNKIRQQPYAVV 642
Query: 127 IFDEVDKFPKGLLDVIIPFIDHHAVYNQI----SFQNTIFLFLSNSG 169
+FDE++K + D+ + +D +++++ F N+I LF SN G
Sbjct: 643 LFDEIEKAHPSVYDIFLQIMDEGKLHDRLGKEGDFSNSIVLFTSNVG 689
>gi|319937484|ref|ZP_08011889.1| chaperone ClpB [Coprobacillus sp. 29_1]
gi|319807324|gb|EFW03933.1| chaperone ClpB [Coprobacillus sp. 29_1]
Length = 856
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 5 DKFIQSSNVRVL--EEQLKQHVHGQELAISHICGA-LKNHFQNRYHNTKALAISLHGLPG 61
+K ++S ++L +E L+Q V GQ+ AI + A L++ N + G G
Sbjct: 551 NKLMESEREKLLHLDEILRQRVIGQDEAIEKVSDAILRSRAGINDENRPIGSFLFLGPTG 610
Query: 62 TGKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISN 117
GK V + +F K+ S ++ KF+ SR+ +V + +
Sbjct: 611 VGKTEVAKSLAEQLFDSEKNIVRIDMSEYMEKFSVSRLLGAPPGYVGY---EEGGQLSEA 667
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVY----NQISFQNTIFLFLSNSGGTEI 173
V +I + DE++K + +V++ +D + N +SF+NTI + SN G +
Sbjct: 668 VRRAPYSIVLLDEIEKAHPEVFNVLLQVLDDGRITDSKGNVVSFKNTIIIMTSNIGSQYL 727
Query: 174 MNTFLELRKSE 184
+ E + E
Sbjct: 728 LQGNTEETRRE 738
>gi|450062481|ref|ZP_21844366.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
gi|449205821|gb|EMC06551.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
Length = 813
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE +L + V GQ+ A+S I A++ N R + G G GK + +
Sbjct: 509 LERELHKRVIGQDDAVSSISRAIRRNQSGIRVGKRPIGSFMFLGPTGVGKTELAKALAEV 568
Query: 75 IFK------RYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 569 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVGY---EEGGELTEKVRNKPYSVLL 622
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDEV+K + D+++ +D + + ++ F NTI + SN G T +
Sbjct: 623 FDEVEKAHPDIFDILLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAL 672
>gi|419564351|ref|ZP_14101734.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1098]
gi|419574831|ref|ZP_14111531.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1909]
gi|419579218|ref|ZP_14115635.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1948]
gi|419602342|ref|ZP_14136921.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
151-9]
gi|380542958|gb|EIA67184.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1098]
gi|380554496|gb|EIA77958.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1909]
gi|380557787|gb|EIA80985.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
1948]
gi|380581332|gb|EIB03059.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
151-9]
Length = 857
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|451941663|ref|YP_007462300.1| endopeptidase Clp ATP-binding chain a [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901050|gb|AGF75512.1| endopeptidase Clp ATP-binding chain a [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 781
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K + K + L P G GK V + SS
Sbjct: 457 LEGELKHVVYGQDQAISALVSSIKLARAGLRESDKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGIELLRFDMSEYMERHTVARLIGAPPGYIGFDQGGL---LTDAVDQKPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +D+ + + +I F N I + +N+G +E+ +
Sbjct: 574 AHPELFNILLQVMDYGKLTDHNGKKIDFCNIILIMTTNAGASELAKS 620
>gi|395789920|ref|ZP_10469428.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
taylorii 8TBB]
gi|395428142|gb|EJF94224.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Bartonella
taylorii 8TBB]
Length = 783
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
LE +LK V+GQ+ AIS + ++K K + L P G GK V + SS
Sbjct: 457 LERELKHVVYGQDQAISALVSSIKLARAGLRELEKPIGSYLFSGPTGVGKTEVAKQLASS 516
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + +R+ ++ + L + V A+ + DE++K
Sbjct: 517 LGVELLRFDMSEYMERHTVARLIGAPPGYIGFNQGGL---LTDAVDQHPHAVLLLDEIEK 573
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLE----LRKSEC 185
L ++++ +D+ + + +I F+N I + +N+G +++ + + LR+ +
Sbjct: 574 AHPELFNLLLQVMDYGKLTDHNGKKIDFRNIILIMTTNAGASDMAKSAIGFGKVLREGDD 633
Query: 186 IEFI 189
IE I
Sbjct: 634 IEAI 637
>gi|419613300|ref|ZP_14147148.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H9]
gi|380588218|gb|EIB09357.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H9]
Length = 857
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|304311207|ref|YP_003810805.1| ATP-dependent clp protease, ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301796940|emb|CBL45153.1| ATP-dependent clp protease, ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 763
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE L+ V GQ+ AI + A+K H K + L P G GK VT +
Sbjct: 461 LRNLERDLRLAVFGQDEAIGVLSNAIKMSRAGLSHPDKPIGSFLFAGPTGVGKTEVTRQL 520
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
++ S ++ + SR+ +V + L I+ C + + DE
Sbjct: 521 AKTMGMELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKSPHC---VLLLDE 577
Query: 131 VDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
V+K + ++++ +DH + + + F+N I + +N+G +
Sbjct: 578 VEKAHPDVFNLLLQVMDHGTLTDNNGRKADFRNVIIVMTTNAGAETV 624
>gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
coli RM2228]
gi|305433063|ref|ZP_07402219.1| chaperone protein ClpB [Campylobacter coli JV20]
gi|419537768|ref|ZP_14077136.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
90-3]
gi|419544161|ref|ZP_14083126.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2553]
gi|419546573|ref|ZP_14085326.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2680]
gi|419551120|ref|ZP_14089588.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2688]
gi|419552412|ref|ZP_14090718.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2692]
gi|419554346|ref|ZP_14092490.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2698]
gi|419558055|ref|ZP_14095941.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
80352]
gi|419560848|ref|ZP_14098482.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
86119]
gi|419590798|ref|ZP_14126161.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
37/05]
gi|419594938|ref|ZP_14130055.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23336]
gi|419599893|ref|ZP_14134672.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23344]
gi|419608594|ref|ZP_14142781.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H6]
gi|419614324|ref|ZP_14148110.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H56]
gi|57019101|gb|EAL55816.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter
coli RM2228]
gi|304443764|gb|EFM36421.1| chaperone protein ClpB [Campylobacter coli JV20]
gi|380519654|gb|EIA45720.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
90-3]
gi|380522249|gb|EIA47941.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2680]
gi|380525483|gb|EIA50999.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2553]
gi|380529141|gb|EIA54332.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2688]
gi|380531453|gb|EIA56475.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2692]
gi|380533096|gb|EIA58056.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
2698]
gi|380536577|gb|EIA61195.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
86119]
gi|380540310|gb|EIA64622.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
80352]
gi|380569941|gb|EIA92373.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
37/05]
gi|380574808|gb|EIA96901.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23336]
gi|380583871|gb|EIB05380.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
LMG 23344]
gi|380585220|gb|EIB06585.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H6]
gi|380592935|gb|EIB13787.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
H56]
Length = 857
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ +V + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVG---HEEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + ++++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|419588426|ref|ZP_14124248.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
317/04]
gi|380570129|gb|EIA92559.1| ATP-dependent Clp protease ATP-binding subunit [Campylobacter coli
317/04]
Length = 857
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|424848399|ref|ZP_18272885.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni D2600]
gi|356488186|gb|EHI18119.1| ATP-dependent chaperone protein ClpB [Campylobacter jejuni subsp.
jejuni D2600]
Length = 857
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALSRAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN + IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMN 730
>gi|409437269|ref|ZP_11264388.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium mesoamericanum STM3625]
gi|408750993|emb|CCM75544.1| ATP-dependent specificity subunit of clpA-clpP serine protease
[Rhizobium mesoamericanum STM3625]
Length = 833
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQN-RYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L+ V+GQ+ AI + ++K R N + G G GK V + SS
Sbjct: 470 LEKELRSVVYGQDTAIEALSTSIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLASS 529
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L + V + + DE++K
Sbjct: 530 LGVELLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGL---LTDGVDQHPHCVVLLDEIEK 586
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
+ ++++ +DH + + +I F+N I + +N+G +E+
Sbjct: 587 AHPDIYNILLQVMDHGTLTDHNGKKIDFRNVILIMTTNAGASEM 630
>gi|313230285|emb|CBY07989.1| unnamed protein product [Oikopleura dioica]
Length = 537
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE +L +++ GQ+ AI + A++ + + + G G GK + + I
Sbjct: 208 LESRLSENIIGQKAAIKQVAAAIRRKENGWVDSDHPVVMIFLGSSGIGKTELAKQVAKYI 267
Query: 76 FKRYK------DKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
K D H+ I P QLT +T C A+ +FD
Sbjct: 268 HGNMKEGFVRIDMSEYSSQHEVARLIGAPPGYVGHDKGGQLTE----ALTKCPNAVVLFD 323
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELR 181
E++K L +++ D + + I ++ IF+ SN +I + + LR
Sbjct: 324 EIEKAHPDALPILLQLFDEGRMTDGQGKTIECKDAIFIMTSNLASGQIADYGVALR 379
>gi|144898736|emb|CAM75600.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Magnetospirillum gryphiswaldense MSR-1]
Length = 764
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 13 VRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFI 71
+R LE LK V GQE AI + A+K K + L P G GK V +
Sbjct: 453 LRTLERDLKTLVFGQEKAIEALASAIKLARAGLREPEKPIGCYLFSGPTGVGKTEVARQL 512
Query: 72 VSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+ S ++ + + SR+ +V + L I C + + DE
Sbjct: 513 ARIMGIELTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQHPHC---VLLLDE 569
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEI 173
++K L ++++ +DH + + + F+N I + +N+G ++
Sbjct: 570 IEKAHPDLFNILLQVMDHGRLTDHNGKNVDFRNVILIMTTNAGAADM 616
>gi|145518570|ref|XP_001445157.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412601|emb|CAK77760.1| unnamed protein product [Paramecium tetraurelia]
Length = 955
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALK-NHFQNRYHNTKALAISLHGLPGTGKNYVTDF 70
+++ ++ L + + G E I + N +N K + L+G PGTGK +
Sbjct: 427 DIQYAKDVLNKEIEGLEKVKERIIEMISVNKLKNSGQKAKGFILLLNGPPGTGKTSIAKS 486
Query: 71 IVSSIFKRYKDKGTSRFVHKFNSRIHFPN--ENHVSLYRLQLTNWIISNVTACD--RAIF 126
I ++ K SRF+ + + P + H Y + I + + +F
Sbjct: 487 IAKAL------KRNSRFIS--CAGVADPTFFKGHKRTYVDSMPGVFIRELIKSNTMNPVF 538
Query: 127 IFDEVDKFPK----------GLLDVIIP-----FIDHHAVYNQISFQNTIFLFLSN 167
I DE+DK K LL+++ P F DH+ + + F + IF+ SN
Sbjct: 539 ILDELDKVSKHHAGGSDPYYTLLEILNPEENHNFTDHYMDIS-VDFSHVIFILTSN 593
>gi|146321826|ref|YP_001201537.1| ATPases with chaperone activity, ATP-binding protein [Streptococcus
suis 98HAH33]
gi|145692632|gb|ABP93137.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 98HAH33]
Length = 817
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGAL-KNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSS 74
LE++L + V GQE AIS + A+ +N R + + + G G GK + +
Sbjct: 510 LEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEI 569
Query: 75 IFK------RYKDKGTSRFVHKF-NSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F R+ S ++ KF SR++ +V + + V ++ +
Sbjct: 570 LFDDESALIRFD---MSEYMEKFAASRLNGAPPGYVG---YEEGGELTEKVRNKPYSVLL 623
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
FDE++K + +V++ +D + + ++ F NT+ + SN G T +
Sbjct: 624 FDELEKAHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIMTSNLGATAL 673
>gi|393769259|ref|ZP_10357787.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium sp. GXF4]
gi|392725500|gb|EIZ82837.1| ATP-dependent Clp protease ATP-binding protein ClpA
[Methylobacterium sp. GXF4]
Length = 831
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-GTGKNYVTDFIVSS 74
L E LK+ V+GQ AI + A+K K + L P G GK + +S
Sbjct: 467 LTENLKRVVYGQPSAIEALTSAIKLARAGLRDPDKPIGSYLFAGPTGVGKTEAAKQLAAS 526
Query: 75 IFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDK 133
+ S ++ + SR+ +V + L I C + + DE++K
Sbjct: 527 LGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHC---VLLLDEIEK 583
Query: 134 FPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
L ++++ +DH + + Q+ F+N I + SN+G +++ +
Sbjct: 584 AHPDLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTSNAGASDLAKS 630
>gi|357405931|ref|YP_004917855.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Methylomicrobium alcaliphilum 20Z]
gi|351718596|emb|CCE24267.1| ATP-dependent Clp protease ATP-binding subunit ClpA
[Methylomicrobium alcaliphilum 20Z]
Length = 756
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 6 KFIQSSNVR---VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP-G 61
K + S++V LE+ LK V GQ+ AIS + A+K K + L P G
Sbjct: 440 KSVSSNDVEKLEALEKNLKMLVFGQDEAISALASAIKLSRAGLRDAQKTIGSFLFAGPTG 499
Query: 62 TGKNYVTDFIVSSIFKRYKDKGTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTA 120
GK VT + + S ++ + SR+ +V + L + VT
Sbjct: 500 VGKTEVTRQLAKVLGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTEQVTK 556
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTE 172
A+ + DE++K + ++++ +DH + + + F+N I + +N+G E
Sbjct: 557 HPHAVLLLDELEKAHPDVFNLLLQVMDHGTLTDNNGRKADFRNIILVMTTNAGAEE 612
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,084,679,375
Number of Sequences: 23463169
Number of extensions: 122113899
Number of successful extensions: 379961
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 1427
Number of HSP's that attempted gapping in prelim test: 377455
Number of HSP's gapped (non-prelim): 1905
length of query: 202
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 67
effective length of database: 9,191,667,552
effective search space: 615841725984
effective search space used: 615841725984
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 73 (32.7 bits)