BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1695
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ERA9|TOR1A_CRICR Torsin-1A (Fragment) OS=Cricetus cricetus GN=TOR1A PE=2 SV=1
Length = 273
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ N K L +SLHG
Sbjct: 2 ECCGQK--RSLSREALQKDLDDKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWT 58
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+ + I +I Y+ S +VH F + +HFP+ ++V+LY+ QL WI NV+A
Sbjct: 59 GTGKNFASKIIAENI---YEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVSA 115
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+
Sbjct: 116 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDF 175
Query: 181 RKS 183
KS
Sbjct: 176 WKS 178
>sp|Q9ER41|TOR1B_MOUSE Torsin-1B OS=Mus musculus GN=Tor1b PE=2 SV=2
Length = 336
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ L++ + GQ LA I AL F+N ++ K L +SLHG GTGKN+++ +
Sbjct: 64 NTSALKLDLEEKLFGQHLATEVILKALTG-FRNNKNSKKPLTLSLHGWAGTGKNFISQIV 122
Query: 72 VSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+++ KG S FVH F S +HFP+E + +Y+ QL WI NV+AC ++FIFDE
Sbjct: 123 AENLYP----KGLKSNFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDE 178
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL----RKSECI 186
+DK G++D I PF+D++ + IS++ IF+FLSN+GG I T L+ RK E I
Sbjct: 179 MDKLHPGIIDAIKPFLDYYEQVDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRKREEI 238
Query: 187 EF 188
+
Sbjct: 239 QL 240
>sp|Q9ER39|TOR1A_MOUSE Torsin-1A OS=Mus musculus GN=Tor1a PE=1 SV=1
Length = 333
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 8 IQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYV 67
++S + L++ L + GQ LA I A+ N K L +SLHG GTGKN+
Sbjct: 54 MRSLSREALQKDLDNKLFGQHLAKKVILNAVSGFLSNP-KPKKPLTLSLHGWTGTGKNFA 112
Query: 68 TDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+ I +I Y+ S +VH F + +HFP+ ++++ Y+ QL WI NV+AC R+IFI
Sbjct: 113 SKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVSACARSIFI 169
Query: 128 FDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
FDE+DK GL+D I PF+D++ V +++S+Q IF+FLSN+G I + L+ KS
Sbjct: 170 FDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQKAIFIFLSNAGAERITDVALDFWKS 225
>sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A PE=2 SV=1
Length = 332
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L + GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDNKLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q IF+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAIFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>sp|O14656|TOR1A_HUMAN Torsin-1A OS=Homo sapiens GN=TOR1A PE=1 SV=1
Length = 332
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C K +S + L++ L ++ GQ LA I A+ F N K L +SLHG
Sbjct: 48 ECCGQK--RSLSREALQKDLDDNLFGQHLAKKIILNAVFG-FINNPKPKKPLTLSLHGWT 104
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V+ I +I Y+ S +VH F + +HFP+ ++++LY+ QL WI NV+A
Sbjct: 105 GTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLEL 180
C R+IFIFDE+DK GL+D I PF+D++ + + +S+Q +F+FLSN+G I + L+
Sbjct: 162 CARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
Query: 181 RKS 183
+S
Sbjct: 222 WRS 224
>sp|O14657|TOR1B_HUMAN Torsin-1B OS=Homo sapiens GN=TOR1B PE=1 SV=2
Length = 336
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C ++ + N L+ L++ + GQ LA I AL F+N + K L +SLHG
Sbjct: 55 ECCREE--RPLNASALKLDLEEKLFGQHLATEVIFKALTG-FRNNKNPKKPLTLSLHGWA 111
Query: 61 GTGKNYVTDFIVSSIFKRYKDKG-TSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVT 119
GTGKN+V+ + ++ KG S FVH F S +HFP+E + LY+ QL WI NV+
Sbjct: 112 GTGKNFVSQIVAENLHP----KGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVS 167
Query: 120 ACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
AC ++FIFDE+DK G++D I PF+D++ + +S++ IF+FLSN+GG I T L+
Sbjct: 168 ACANSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALD 227
Query: 180 L----RKSECIEF 188
RK E I+
Sbjct: 228 FWRAGRKREDIQL 240
>sp|A4FUH1|TOR2A_BOVIN Torsin-2A OS=Bos taurus GN=TOR2A PE=2 SV=1
Length = 321
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVVLEAWRS 215
>sp|Q8R1J9|TOR2A_MOUSE Torsin-2A OS=Mus musculus GN=Tor2a PE=2 SV=1
Length = 321
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFISNAGGEQINQVALEAWRS 215
>sp|Q5JU69|TOR2A_HUMAN Torsin-2A OS=Homo sapiens GN=TOR2A PE=2 SV=1
Length = 321
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRS 215
>sp|Q6AYR4|TOR2A_RAT Torsin-2A OS=Rattus norvegicus GN=Tor2a PE=2 SV=1
Length = 321
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
GL++V+ PF+ V +++ IF+F+SN+GG +I LE +S
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRS 215
>sp|O77277|TORS_DROME Torsin-like protein OS=Drosophila melanogaster GN=torp4a PE=2 SV=2
Length = 340
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 1 EACTDKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLP 60
E C D+ I + + LE L++ + GQ + HI ALK H + + K L IS HG P
Sbjct: 52 ECCDDRNI-PARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQP 110
Query: 61 GTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTA 120
GTGKN+V + I ++ Y S +V K+ + FP E+ VS YR+++ N + + +
Sbjct: 111 GTGKNFVAEQIADAM---YLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRS 167
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMN 175
C R++FIFDEVDK P G+ D + +D++A + IF+FLSN+ G+ I +
Sbjct: 168 CPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIAS 222
>sp|Q68F68|TOR2A_XENLA Torsin-2A OS=Xenopus laevis GN=tor2a PE=2 SV=1
Length = 314
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 103/171 (60%), Gaps = 4/171 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
++ L+ L ++V GQ LA + ++K ++ + +K L +SLHG GTGK +V+ +
Sbjct: 41 DIEALDCDLARNVFGQHLAQELLFKSVKEFIESD-NPSKPLVLSLHGWSGTGKTFVSSLL 99
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
V +FK + SRFVH F+ +HFP ++ Y++ L WI N+TAC R++F+F+E+
Sbjct: 100 VKHLFK---EGSQSRFVHFFSPVLHFPRVQNLEQYKVDLKGWIQGNLTACGRSLFVFEEM 156
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRK 182
DK GL+D I+PF+ V +++ IFLF+SN+GG +I L+ +
Sbjct: 157 DKMHPGLIDAIVPFLGTSWVVYGSNYRKAIFLFISNAGGDDINEVALDFWR 207
>sp|P0C7W1|TOR2X_BOVIN Prosalusin OS=Bos taurus GN=TOR2A PE=3 SV=1
Length = 242
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA S + ALK Q+ TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLARSLVVKALKAFLQDPA-PTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ +H+ Y+ L +W+ N+T C R++F+FDE+DK
Sbjct: 111 FR---DGLRSPHVHHFSPVIHFPHPSHLERYKKDLKSWVQGNLTVCSRSLFLFDEMDKLA 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLIEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>sp|Q8N2E6|TOR2X_HUMAN Prosalusin OS=Homo sapiens GN=TOR2A PE=1 SV=1
Length = 242
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + ALK F TK L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKALKA-FVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ +HFP+ +H+ Y+ L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FQ---GGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>sp|P0C7W3|TOR2X_MOUSE Prosalusin OS=Mus musculus GN=Tor2a PE=2 SV=1
Length = 231
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L QH+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLAQHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQHL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ D S VH F+ IHFP+ + Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---DGLRSPHVHHFSPIIHFPHPSRTEQYKKELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLQPFLGPSWVVYGTNYRKAIFIFI 197
>sp|P0C7W2|TOR2X_RAT Prosalusin OS=Rattus norvegicus GN=Tor2a PE=2 SV=1
Length = 231
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE L +H+ GQ LA + + +LK Q+ +K L +SLHG GTGK+YV+ + +
Sbjct: 52 LECDLARHLAGQHLAKALVVKSLKAFVQDPA-PSKPLVLSLHGWTGTGKSYVSSLLAQYL 110
Query: 76 FKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEVDKFP 135
F+ S VH F+ IHFP+ +H Y+ +L +W+ N+TAC R++F+FDE+DK P
Sbjct: 111 FR---GGLRSPHVHHFSPIIHFPHPSHTEQYKNELKSWVQGNLTACGRSLFLFDEMDKLP 167
Query: 136 KGLLDVIIPFIDHHAVYNQISFQNTIFLFL 165
GL++V+ PF+ V +++ IF+F+
Sbjct: 168 PGLMEVLKPFLGPSWVVYGTNYRKAIFIFI 197
>sp|Q95NU5|TORS_CAEEL Torsin-like protein OS=Caenorhabditis elegans GN=ooc-5 PE=1 SV=1
Length = 356
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Query: 12 NVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFI 71
N L+ + + GQ L + ++K+H+ N + K L +S HG G+GKNYV + I
Sbjct: 65 NYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNE-NPRKPLVLSFHGYTGSGKNYVAEII 123
Query: 72 VSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDEV 131
++ F+ S FV + FP++N + Y+++L N I++ V C R+IFIFDE
Sbjct: 124 ANNTFRL---GLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEA 180
Query: 132 DKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
DK P+ LL I PF+D+++ + + F+ +IF+ LSN GG EI
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEI 222
>sp|Q9H497|TOR3A_HUMAN Torsin-3A OS=Homo sapiens GN=TOR3A PE=1 SV=1
Length = 397
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L +HGQ L + ++ + + KALA+S HG GTGKN+V
Sbjct: 120 SNNFTGLEWDLNVRLHGQHLVQQLVLRTVRGYLETP-QPEKALALSFHGWSGTGKNFVAR 178
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F + HFP+ +V LY+ QL + I C + +FIFD
Sbjct: 179 MLVENL---YRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFD 235
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN-QISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K GLL+V+ P ++ A + TIFLFLSN G I L+L K+
Sbjct: 236 EAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKA 290
>sp|Q5M936|TOR3A_RAT Torsin-3A OS=Rattus norvegicus GN=Tor3a PE=2 SV=1
Length = 395
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN+V
Sbjct: 118 SNNFTGLESDLRVRLHGQHLASKLVLEAVKGYLEMP-QVGKALALSFHGWSGTGKNFVAR 176
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
+V ++ Y+D S V F S HFP+ +V LY+ L + C ++ F+FD
Sbjct: 177 MLVDNL---YRDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFD 233
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFL LSN GG+ I L L K+
Sbjct: 234 EAEKLHPGLLELLEPYLEPRSPETHGAELPRAIFLLLSNLGGSVINEVVLGLLKA 288
>sp|Q9ER38|TOR3A_MOUSE Torsin-3A OS=Mus musculus GN=Tor3a PE=1 SV=2
Length = 385
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 10 SSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTD 69
S+N+ LE L+ +HGQ LA + A+K + + KALA+S HG GTGKN++
Sbjct: 108 SNNLTGLESDLRVRLHGQHLASKLVLRAVKGYLEMP-QVGKALALSFHGWSGTGKNFLAR 166
Query: 70 FIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFD 129
++ ++ Y+D S V F S HFP+ +V Y+ +L + C ++ F+FD
Sbjct: 167 ILMDNL---YRDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFVFD 223
Query: 130 EVDKF-PKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKS 183
E +K P L + + IFLFLSN GG+ I L L K+
Sbjct: 224 EAEKLHPGLLELLEPYLEPRSPEARGVEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
>sp|Q0IHC5|TO4AA_XENLA Torsin-4A-A OS=Xenopus laevis GN=tor4a-a PE=2 SV=1
Length = 420
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ+ AI + L+++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQKRAIEKLMDHLQDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++ + K ++ + FV ++ + + PNEN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSIMDNDFVLQYYTMHNCPNENDVTQCQSEMSGLISEMISRAEIE 264
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+FIFDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDEVEVMPVALLDVLHRYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>sp|Q5BKJ7|TOR4A_XENTR Torsin-4A OS=Xenopus tropicalis GN=tor4a PE=2 SV=1
Length = 420
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 150 DDNLQKYDLDGLEKTLQREVFGQRRAIDKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 208
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD-- 122
++ + K ++ + FV ++ + + P+EN V+ + +++ I ++ +
Sbjct: 209 SHTGRLLA----KHFRSVMDNDFVLQYYTMHNCPDENDVAKCQAEVSGMISEMISRAEIE 264
Query: 123 --RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+FIFDE++ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 265 EKIPVFIFDELEVMPVALLDVLHGYFQ----LNQSNEYLNAVYILISNIGGNEITKFVLQ 320
>sp|Q9NXH8|TOR4A_HUMAN Torsin-4A OS=Homo sapiens GN=TOR4A PE=1 SV=2
Length = 423
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+S I ++++ H ++ L ++LHG G GK
Sbjct: 142 DDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVH-SRPLLLALHGPSGVGK 200
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + +D S V ++++R H P R +L + V +
Sbjct: 201 SHVGRLLARHFRSVLED---SALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAE 257
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNTFLE 179
+ + D+V+ P+ LLD + F+ ++ F N I++ LS +GG E+ L+
Sbjct: 258 EKTPLLVLDDVELMPRPLLDELHGFLQPQRSHH---FHNAIYVLLSGAGGAEVTRFVLQ 313
>sp|Q8BH02|TOR4A_MOUSE Torsin-4A OS=Mus musculus GN=Tor4a PE=2 SV=1
Length = 426
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D Q ++ LE+ L++ V GQ A+ I L+++ H + L ++LHG G GK
Sbjct: 137 DDNAQRYDLDGLEKALQRSVFGQPAAVGRIMALLRDYLATHVH-SHPLLLALHGPSGVGK 195
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + F+ + G V ++++R H P V R +L + V +
Sbjct: 196 SHVGRLLARH-FRAVLEDGA--LVLQYHARYHCPEPRPVQDCRKELAQRVADVVAQAEAE 252
Query: 124 ---AIFIFDEVDKFPKGLLD----VIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEIMNT 176
+ + DE + P LLD ++ P HH F N I++ LS +GG EI +
Sbjct: 253 EKTPLLVLDEAELLPPALLDELHDLLQPQRSHH-------FHNAIYVLLSGAGGIEITHF 305
Query: 177 FLE 179
L+
Sbjct: 306 VLQ 308
>sp|Q3KQ18|TO4AB_XENLA Torsin-4A-B OS=Xenopus laevis GN=tor4a-b PE=2 SV=1
Length = 418
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D +Q ++ LE+ L++ V GQ AI + LK++ YHN K L +S +G G GK
Sbjct: 148 DDNLQKYDLDGLEKTLQREVFGQTRAIEKLMDHLKDYLATHYHN-KPLVLSFNGPSGVGK 206
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++ + K ++ + FV ++ + + PNE+ V + +++ I ++ +
Sbjct: 207 SHTGRLLA----KHFRSVVDNDFVLQYYTNHNCPNESDVIQCQAEVSAMISQMISRAEIE 262
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQIS-FQNTIFLFLSNSGGTEIMNTFLE 179
+F+FDEV+ P LLDV+ + NQ + + N +++ +SN GG EI L+
Sbjct: 263 EKIPVFLFDEVEAMPVALLDVLHSYFQ----LNQSNEYLNVVYILISNIGGHEITKFVLQ 318
>sp|Q568B8|TOR4A_DANRE Torsin-4A OS=Danio rerio GN=tor4a PE=2 SV=1
Length = 409
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 5 DKFIQSSNVRVLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGK 64
D + ++ LE+ LK+ V GQ+ + G L+++ HN K L +S HG G GK
Sbjct: 140 DDHVLKYDLEGLEKTLKREVFGQQEVAEGLLGHLQDYLSTYVHN-KPLVLSFHGPTGVGK 198
Query: 65 NYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDR- 123
++V + + ++ V ++ H P ++ + + L + I V+ +
Sbjct: 199 SHVGRLLA----QHFRSVVGEELVMQYFVLHHCPTDDDIPVCTKSLESHISEMVSQGEEE 254
Query: 124 ---AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQISFQNTIFLFLSNSGGTEI 173
+FIFDEV+ P+ L+D + I N + N I++ +SN G +I
Sbjct: 255 EKIPVFIFDEVEHMPRQLMDTLRELIQPQ---NSNKYLNAIYILISNLGHEDI 304
>sp|Q60649|CLPB_MOUSE Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb
PE=1 SV=1
Length = 677
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>sp|Q5E9N5|CLPB_BOVIN Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2
SV=1
Length = 677
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>sp|Q9WTT2|CLPB_RAT Caseinolytic peptidase B protein homolog OS=Rattus norvegicus
GN=Clpb PE=2 SV=1
Length = 677
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++L+QH+ GQE AI+ + A++ Y L G G GK +
Sbjct: 309 LEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 361
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + +I +
Sbjct: 362 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQ 415
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 416 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 475
Query: 177 FLELRK 182
L+LR+
Sbjct: 476 ALQLRQ 481
>sp|Q9H078|CLPB_HUMAN Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB
PE=1 SV=1
Length = 707
Score = 50.4 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLHGLPGTGKNYVTDFIVSSI 75
LE++LK+H+ GQE AI+ + A++ Y L G G GK +
Sbjct: 339 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA------- 391
Query: 76 FKRYKDKGTSRFVHKFNSR-------IHFPNENHVSLYRLQLTNWI--------ISNVTA 120
K T++++HK + F + V+ + ++ +
Sbjct: 392 ------KQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 445
Query: 121 CDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNT 176
C A+ +FDEVDK +L +++ D + + I ++ IF+ SN EI
Sbjct: 446 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 505
Query: 177 FLELRK 182
L+LR+
Sbjct: 506 ALQLRQ 511
>sp|Q7V8B1|CLPB_PROMM Chaperone protein ClpB OS=Prochlorococcus marinus (strain MIT 9313)
GN=clpB PE=3 SV=1
Length = 865
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
K +QS ++L E +L Q V GQE A+ + A++ + +A L G G
Sbjct: 556 KLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGV 615
Query: 63 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 118
GK ++ + S +F S ++ K + SR+ +V + + V
Sbjct: 616 GKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGY---EAGGQLTEAV 672
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
A+ +FDEV+K + + +V++ +D V + + F NT+ + SN G I+
Sbjct: 673 RRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSIL 732
Query: 175 N 175
+
Sbjct: 733 D 733
>sp|Q7VBL0|CLPB_PROMA Chaperone protein ClpB OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=clpB PE=3 SV=1
Length = 864
Score = 38.9 bits (89), Expect = 0.026, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGTGKNYVTDFIVSS 74
LE++L V GQ+ A+ + +++ ++ + + L G G GK ++ +
Sbjct: 569 LEDKLNSKVIGQKQAVQAVADSIQRSRTGLSDPSRPMGSFLLLGPTGVGKTELSKSLAKE 628
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRL-QLTNWIISNVTACDRAIFIFD 129
+F K S ++ K + SR+ +V QL+ + N ++ +FD
Sbjct: 629 LFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRN----PYSVILFD 684
Query: 130 EVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMNTFLELRKSEC 185
EV+K +L++++ +D + + I+F+NTI + SN G I+ + + E
Sbjct: 685 EVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESIIEMTNKKNEYEL 744
Query: 186 IEFIFQCQPLKVYLK 200
IE + + Q LK Y K
Sbjct: 745 IEEVVRNQ-LKNYFK 758
>sp|Q9PI02|CLPB_CAMJE Chaperone protein ClpB OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=clpB PE=3 SV=1
Length = 857
Score = 37.4 bits (85), Expect = 0.071, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E+ LK+ V GQ+ A+S + A+K + + K + L G G GK +
Sbjct: 565 VEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF 624
Query: 75 IFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFIFDE 130
+F K S F+ K + SR+ ++ + + V ++ +FDE
Sbjct: 625 LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGH---EEGGELTEAVRRKPYSVLLFDE 681
Query: 131 VDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
V+K K + +V++ +D + + F+NTI + SN IMN
Sbjct: 682 VEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMN 730
>sp|Q03F27|CLPX_PEDPA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pediococcus
pentosaceus (strain ATCC 25745 / 183-1w) GN=clpX PE=3
SV=1
Length = 418
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 20 LKQHVHGQELAISHICGALKNHFQ--NRYHNTKALA---------ISLHGLPGTGKNYVT 68
L Q+V GQE A + A+ NH++ N+ TKA ISL G G+GK ++
Sbjct: 72 LNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEPELQKSNISLIGPTGSGKTFLA 131
Query: 69 DFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNEN--HVSLYRLQLTNWIISNVTACDRAIF 126
+ + + + + + E+ ++ L LQ ++ NV A +R I
Sbjct: 132 QSLAKILNVPFAIADATTL-----TEAGYVGEDVENILLKLLQNADY---NVEAAERGII 183
Query: 127 IFDEVDKFPK 136
DE+DK K
Sbjct: 184 YIDEIDKIAK 193
>sp|Q7U637|CLPB1_SYNPX Chaperone protein ClpB 1 OS=Synechococcus sp. (strain WH8102)
GN=clpB1 PE=3 SV=2
Length = 862
Score = 35.4 bits (80), Expect = 0.23, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
+ +QS ++L E+ L Q V GQ A++ + A++ + +A L G G
Sbjct: 555 RLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGV 614
Query: 63 GKNYVTDFIVSSIF-----------KRYKDKGT-SRFVHKFNSRIHFPNENHVSLYRLQL 110
GK ++ + + +F Y +K T SR + + + QL
Sbjct: 615 GKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGG-------QL 667
Query: 111 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLS 166
T V A+ +FDEV+K + +V++ +D V + + F NT+ + S
Sbjct: 668 T----EAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTS 723
Query: 167 NSGGTEIM--------NTFLELRKSECIEFIFQ 191
N G I+ +T +E R +E ++ F+
Sbjct: 724 NIGSQSILELAGDPEQHTAMEQRVNEALKAKFR 756
>sp|Q7VJY3|CLPB_HELHP Chaperone protein ClpB OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=clpB PE=3 SV=1
Length = 859
Score = 34.7 bits (78), Expect = 0.40, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 19/206 (9%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGT 62
K +QS R+L E +L + V GQ+ AI I A+K + ++ + L G G
Sbjct: 552 KMLQSQKERILGIESELAKSVVGQDDAIKAIARAIKRNKAGLNDASRPIGSFLFLGPTGV 611
Query: 63 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKFN-SRIHFPNENHVSLYRLQLTNWIISNV 118
GK + +F K S ++ K SR+ +V + + +
Sbjct: 612 GKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGY---EEGGVLTEAI 668
Query: 119 TACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIM 174
+I +FDEV+K + ++++ +D + + + F NTI + SN +IM
Sbjct: 669 RRKPYSIVLFDEVEKAHPDVFNILLQVLDDGRLTDSKGVSVDFSNTIIILTSNIASDKIM 728
Query: 175 NTFLELRKSECIEFIFQCQPLKVYLK 200
+ + + ++ + LK+Y K
Sbjct: 729 EIGDKQERQKAVK-----EALKMYFK 749
>sp|A8Y3E2|LONP2_CAEBR Lon protease homolog 2, peroxisomal OS=Caenorhabditis briggsae
GN=CBG23035 PE=3 SV=2
Length = 773
Score = 34.7 bits (78), Expect = 0.44, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 47 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 106
++ K + + G PG GK + I S+ ++++ + + R H Y
Sbjct: 325 NSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIR------GHRRTY 378
Query: 107 RLQLTNWIISNVTAC--DRAIFIFDEVDKFPKG--------LLDVIIP-----FIDHHAV 151
+ II + C + +F+ DEVDK G LL+++ P F DH
Sbjct: 379 VAAMPGRIIEALKHCKSNNPVFLLDEVDKLYSGNQGSPSAALLELLDPEQNSTFHDH--- 435
Query: 152 YNQISFQNTIFLFLSNSGGTEIMNTFLELR 181
Y I F + +F++ + E + L+ R
Sbjct: 436 YLNIPFDVSKIMFIATANDVERLEPALKDR 465
>sp|Q54316|HLYB_TREHY Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1
Length = 828
Score = 34.3 bits (77), Expect = 0.51, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 6 KFIQSSNVRV--LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGT 62
+ + S + R+ +EE+L Q V GQ+ AIS I A++ + + L + G G
Sbjct: 499 RLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGV 558
Query: 63 GKNYVTDFIVSSIFKRYKDK---GTSRFVHKF--NSRIHFPNENHVSLYRLQLTNWIISN 117
GK + + +F S F+ KF + I P LT
Sbjct: 559 GKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLT----EK 614
Query: 118 VTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
V ++ +FDE++K + ++++ ++ + + ++ F NTI + SN G +I
Sbjct: 615 VRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDI 674
Query: 174 M 174
+
Sbjct: 675 V 675
>sp|Q7V2A3|CLPB_PROMP Chaperone protein ClpB OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=clpB PE=3 SV=1
Length = 860
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEI 173
++ + DE++K K +LDV++ +D + + ISF+N+I + SN G I
Sbjct: 675 SLILLDEIEKAHKDVLDVLLQVLDDGIITDGQGRTISFKNSIIVLTSNLGSQSI 728
>sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana
GN=CLPB3 PE=1 SV=1
Length = 968
Score = 34.3 bits (77), Expect = 0.64, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 28/177 (15%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALA-ISLHGLPGTGKNYVTDFIVSS 74
LEE+L + V GQ A++ + A++ + +A G G GK + + S
Sbjct: 642 LEEELHKRVVGQNPAVTAVAEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASY 701
Query: 75 IFK-----------RYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACD 122
+F Y +K SR + + + QLT V
Sbjct: 702 MFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGG-------QLT----ETVRRRP 750
Query: 123 RAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMN 175
++ +FDE++K + +V + +D V + +SF NT+ + SN G I+N
Sbjct: 751 YSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQFILN 807
>sp|P33416|HSP78_YEAST Heat shock protein 78, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HSP78 PE=1 SV=2
Length = 811
Score = 34.3 bits (77), Expect = 0.64, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 16 LEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPGTGKNYVTDFIVSS 74
+E LK+ V GQ+ AI+ I A++ + +A + G GTGK +T +
Sbjct: 498 MENSLKERVVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTELTKALAEF 557
Query: 75 IFKRYKDKGTSRF-------VHKFNSRIHFPNENHVSLYRLQLTNWIISNVTACDRAIFI 127
+F + RF H + I P +S QLT V A+ +
Sbjct: 558 LFD--DESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLT----EAVRRKPYAVVL 611
Query: 128 FDEVDKFPKGLLDVIIPFIDH----HAVYNQISFQNTIFLFLSNSGGTEIMN 175
FDE +K + +++ +D ++ + + F+NTI + SN G ++N
Sbjct: 612 FDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLN 663
>sp|Q89YY3|CLPB_BACTN Chaperone protein ClpB OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=clpB
PE=3 SV=1
Length = 862
Score = 33.9 bits (76), Expect = 0.69, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 33/204 (16%)
Query: 6 KFIQSSNVRVL--EEQLKQHVHGQELAISHICGALKNHFQNRYHNTKAL-AISLHGLPGT 62
K +QS ++L E++L Q V GQ+ AI + A++ + + + G G
Sbjct: 548 KMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGV 607
Query: 63 GKNYVTDFIVSSIF-----------KRYKDK-GTSRFVHKFNSRIHFPNENHVSLYRLQL 110
GK + + +F Y++K SR V + + QL
Sbjct: 608 GKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGG-------QL 660
Query: 111 TNWIISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLS 166
T I ++ +FDE++K + ++++ +D + + ++F+NTI + S
Sbjct: 661 TEAIRRK----PYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTS 716
Query: 167 NSGGTEIMNTFLEL---RKSECIE 187
N G + I + +L K E IE
Sbjct: 717 NMGSSYIQSQMEKLSGSNKEEVIE 740
>sp|Q75GT3|CLPB2_ORYSJ Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPB2 PE=2 SV=1
Length = 978
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSNSGGTEIMN 175
+I +FDE++K + +V + +D V + ++SF N+I + SN G I+N
Sbjct: 759 SIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMTSNVGSQFILN 814
>sp|Q9XW87|LONP2_CAEEL Lon protease homolog 2, peroxisomal OS=Caenorhabditis elegans
GN=Y75B8A.4 PE=3 SV=1
Length = 773
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 47 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLY 106
++ K + + G PG GK + I S+ ++++ + + R H Y
Sbjct: 325 NSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIR------GHRRTY 378
Query: 107 RLQLTNWIISNVTAC--DRAIFIFDEVDKFPKG--------LLDVIIP-----FIDHHAV 151
+ II + C + +F+ DEVDK G LL+++ P F DH
Sbjct: 379 VAAMPGRIIEALKTCKTNNPVFLLDEVDKLYSGNQGSPSAALLELLDPEQNSTFHDH--- 435
Query: 152 YNQISFQNTIFLFLSNSGGTEIMNTFLELR 181
Y I F + +F++ + + + L R
Sbjct: 436 YLNIPFDVSKIMFIATANDIDRLEPALRDR 465
>sp|Q11QT1|LON_CYTH3 Lon protease OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=lon PE=3 SV=1
Length = 813
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 29/158 (18%)
Query: 47 HNTKALAISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNE--NHVS 104
+N KA + L+G PG GK + I ++ ++Y + +H +E H
Sbjct: 365 NNMKAPILCLYGPPGVGKTSLGKSIAKALDRKY--------IRMSLGGVHDESEIRGHRK 416
Query: 105 LYRLQLTNWIISNVTACDRA--IFIFDEVDKFPK--------GLLDVIIP-----FIDHH 149
Y + II + + + +FI DE+DK K LL+V+ P F+D+
Sbjct: 417 TYIGAMPGKIIQGIKRSETSNPVFILDEIDKISKDFRGDPSSALLEVLDPEQNSSFMDN- 475
Query: 150 AVYNQISFQNTIFLFLSNSGGTEIMNTFLELRKSECIE 187
+ ++ + + LF++ S + + L R E IE
Sbjct: 476 --FLEVEYDLSKVLFIATSNALDTIQPALRDRM-EIIE 510
>sp|Q8FTE3|ARC_COREF AAA ATPase forming ring-shaped complexes OS=Corynebacterium
efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM
11189 / NBRC 100395) GN=arc PE=3 SV=1
Length = 526
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 53 AISLHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVH 89
+ L+G PG GK + + +S+ +R D GTS F++
Sbjct: 249 GVLLYGPPGCGKTLIAKAVANSLSQRIGDAGTSYFIN 285
>sp|Q73T66|CLPB_MYCPA Chaperone protein ClpB OS=Mycobacterium paratuberculosis (strain
ATCC BAA-968 / K-10) GN=clpB PE=3 SV=1
Length = 848
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 125 IFIFDEVDKFPKGLLDVIIPFIDHHAVYN----QISFQNTIFLFLSN--SGGTE 172
+ +FDE++K + DV++ +D + + + F+NTI + SN SGG+E
Sbjct: 675 VILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLGSGGSE 728
>sp|Q8DTC7|CLPB_STRMU Chaperone protein ClpB OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=clpB PE=3 SV=1
Length = 860
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 124 AIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGGTEIMNTFLE 179
+I + DE++K + + ++ +D + + I F+NTI + SN G T I+ +
Sbjct: 670 SIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSTNILQS--- 726
Query: 180 LRKSECI 186
L+ S CI
Sbjct: 727 LQDSGCI 733
>sp|O34528|YRVN_BACSU Uncharacterized AAA domain-containing protein YrvN OS=Bacillus
subtilis (strain 168) GN=yrvN PE=3 SV=1
Length = 421
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 56 LHGLPGTGKNYVTDFIVSSIFKRYKDKGTSRFVHKFNSRIHFPNENHVSLYRLQLTNWII 115
L+G PG GK + I S TS K N+ I+ + + +++ +I
Sbjct: 43 LYGPPGIGKTSIATAIAGS---------TSIAFRKLNAVINNKKDMEIVAQEAKMSGQVI 93
Query: 116 SNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDH 148
I DEV + KG D ++P++++
Sbjct: 94 ----------LILDEVHRLDKGKQDFLLPYLEN 116
>sp|Q68XR2|CLPB_RICTY Chaperone protein ClpB OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=clpB PE=3 SV=1
Length = 858
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 5 DKFIQSSNVR--VLEEQLKQHVHGQELAISHICGALKNHFQNRYHNTKALAISLH-GLPG 61
D + S R V+E++L + V GQ+ AI I A++ + L L G G
Sbjct: 548 DTMLSSERERLLVIEQKLSESVIGQDEAIKGISDAVRRSRSGIQDINRPLGSFLFLGPTG 607
Query: 62 TGKNYVTDFIVSSIFKRYKDKGT------SRFVHKFN-SRIHFPNENHVSLYRLQLTNWI 114
GK +T + +F D+ S ++ K + SR+ ++ + + +
Sbjct: 608 VGKTELTKALAGFLFD---DRNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGV---L 661
Query: 115 ISNVTACDRAIFIFDEVDKFPKGLLDVIIPFIDHHAVYNQ----ISFQNTIFLFLSNSGG 170
+V + +FDEV+K + ++++ +D + N + F+NTI + SN G
Sbjct: 662 TESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTNSQGITVDFKNTIIVLTSNLGA 721
Query: 171 TEIMN 175
++N
Sbjct: 722 EILVN 726
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,287,366
Number of Sequences: 539616
Number of extensions: 2960685
Number of successful extensions: 10555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 10446
Number of HSP's gapped (non-prelim): 132
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)