Query psy16950
Match_columns 430
No_of_seqs 243 out of 791
Neff 6.2
Searched_HMMs 46136
Date Fri Aug 16 17:51:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16950.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16950hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2264|consensus 100.0 1E-108 2E-113 840.2 21.4 403 10-421 407-902 (907)
2 KOG1022|consensus 100.0 2E-102 4E-107 792.3 23.7 392 9-413 294-691 (691)
3 PF09258 Glyco_transf_64: Glyc 100.0 4.3E-84 9.3E-89 627.5 16.5 238 168-411 1-247 (247)
4 PF03016 Exostosin: Exostosin 99.9 1.3E-22 2.7E-27 199.6 6.3 76 10-85 227-302 (302)
5 KOG1021|consensus 99.8 8E-21 1.7E-25 200.0 10.2 117 10-126 334-458 (464)
6 KOG1021|consensus 98.2 2.9E-08 6.2E-13 105.2 -8.8 292 33-385 155-463 (464)
7 cd03801 GT1_YqgM_like This fam 97.1 0.0021 4.5E-08 61.6 8.8 105 11-119 267-373 (374)
8 cd03814 GT1_like_2 This family 96.8 0.0056 1.2E-07 59.7 8.5 104 11-119 258-363 (364)
9 cd03822 GT1_ecORF704_like This 96.5 0.0098 2.1E-07 58.2 8.6 103 11-119 259-365 (366)
10 cd04962 GT1_like_5 This family 96.3 0.024 5.2E-07 56.4 10.2 105 12-120 263-369 (371)
11 TIGR03088 stp2 sugar transfera 96.3 0.025 5.5E-07 56.9 10.0 107 10-120 263-371 (374)
12 cd03819 GT1_WavL_like This fam 96.3 0.013 2.7E-07 57.9 7.6 93 10-106 254-351 (355)
13 cd03823 GT1_ExpE7_like This fa 96.2 0.017 3.6E-07 56.1 7.9 100 11-119 254-357 (359)
14 cd03807 GT1_WbnK_like This fam 96.2 0.021 4.5E-07 55.2 8.3 102 11-118 260-363 (365)
15 PF00534 Glycos_transf_1: Glyc 96.0 0.0076 1.6E-07 53.8 4.0 84 12-98 85-170 (172)
16 cd03798 GT1_wlbH_like This fam 96.0 0.016 3.5E-07 55.8 6.6 103 12-119 271-374 (377)
17 cd03794 GT1_wbuB_like This fam 96.0 0.021 4.5E-07 55.6 7.3 93 11-106 286-385 (394)
18 cd04184 GT2_RfbC_Mx_like Myxoc 95.9 0.047 1E-06 49.7 9.0 112 167-278 2-120 (202)
19 PRK15427 colanic acid biosynth 95.9 0.044 9.5E-07 57.0 9.8 104 12-120 291-404 (406)
20 cd03820 GT1_amsD_like This fam 95.9 0.029 6.2E-07 53.7 7.8 92 11-104 244-337 (348)
21 cd03808 GT1_cap1E_like This fa 95.7 0.047 1E-06 52.5 8.7 93 11-106 255-349 (359)
22 PF00535 Glycos_transf_2: Glyc 95.7 0.0069 1.5E-07 52.3 2.6 112 169-280 1-117 (169)
23 cd03818 GT1_ExpC_like This fam 95.7 0.044 9.6E-07 56.1 8.8 92 12-106 293-386 (396)
24 TIGR02149 glgA_Coryne glycogen 95.5 0.073 1.6E-06 53.6 9.5 105 12-120 273-385 (388)
25 cd03800 GT1_Sucrose_synthase T 95.4 0.048 1E-06 54.6 7.6 92 12-106 295-388 (398)
26 cd03821 GT1_Bme6_like This fam 95.4 0.059 1.3E-06 52.2 8.1 89 12-105 274-364 (375)
27 PLN02871 UDP-sulfoquinovose:DA 95.4 0.078 1.7E-06 55.9 9.4 91 11-104 323-418 (465)
28 TIGR03449 mycothiol_MshA UDP-N 95.3 0.093 2E-06 53.5 9.6 105 12-121 295-401 (405)
29 PRK10307 putative glycosyl tra 95.2 0.06 1.3E-06 55.4 7.7 106 12-121 296-407 (412)
30 cd05844 GT1_like_7 Glycosyltra 95.1 0.1 2.2E-06 51.9 8.9 91 12-106 257-356 (367)
31 cd02525 Succinoglycan_BP_ExoA 95.0 0.075 1.6E-06 49.7 7.2 111 167-277 1-117 (249)
32 PF13524 Glyco_trans_1_2: Glyc 94.9 0.12 2.7E-06 41.7 7.3 71 32-106 11-82 (92)
33 TIGR03087 stp1 sugar transfera 94.8 0.17 3.7E-06 51.9 9.9 101 12-119 290-394 (397)
34 PRK15484 lipopolysaccharide 1, 94.6 0.19 4E-06 51.7 9.6 105 12-120 269-376 (380)
35 cd02520 Glucosylceramide_synth 94.5 0.25 5.5E-06 45.4 9.3 149 167-348 2-162 (196)
36 cd04951 GT1_WbdM_like This fam 94.3 0.2 4.4E-06 49.2 8.7 102 11-119 254-358 (360)
37 cd04955 GT1_like_6 This family 94.3 0.2 4.4E-06 49.3 8.8 100 12-119 260-362 (363)
38 cd03825 GT1_wcfI_like This fam 94.2 0.31 6.7E-06 47.9 9.9 105 12-120 257-363 (365)
39 cd03792 GT1_Trehalose_phosphor 94.0 0.35 7.6E-06 48.9 10.0 103 12-120 266-370 (372)
40 cd03809 GT1_mtfB_like This fam 94.0 0.12 2.5E-06 50.5 6.3 85 11-100 264-350 (365)
41 cd04179 DPM_DPG-synthase_like 93.5 0.11 2.3E-06 46.6 4.7 107 170-276 1-115 (185)
42 PRK09814 beta-1,6-galactofuran 93.5 0.17 3.8E-06 51.0 6.7 87 12-104 219-316 (333)
43 TIGR02472 sucr_P_syn_N sucrose 93.4 0.27 5.9E-06 51.5 8.1 101 14-119 331-438 (439)
44 cd02510 pp-GalNAc-T pp-GalNAc- 93.2 0.2 4.3E-06 49.5 6.4 107 169-275 1-117 (299)
45 PRK11204 N-glycosyltransferase 93.2 0.25 5.5E-06 51.2 7.4 114 166-279 54-173 (420)
46 cd03802 GT1_AviGT4_like This f 93.1 0.35 7.7E-06 47.1 7.9 68 12-85 236-305 (335)
47 PHA01630 putative group 1 glyc 93.0 0.73 1.6E-05 46.9 10.4 106 11-120 201-329 (331)
48 cd03805 GT1_ALG2_like This fam 93.0 0.32 7E-06 49.0 7.8 90 13-106 293-384 (392)
49 cd06423 CESA_like CESA_like is 93.0 0.22 4.8E-06 42.7 5.6 112 170-282 1-118 (180)
50 cd03813 GT1_like_3 This family 92.9 0.36 7.9E-06 51.2 8.3 103 11-117 362-472 (475)
51 cd04186 GT_2_like_c Subfamily 92.9 0.46 9.9E-06 41.1 7.6 142 170-347 1-149 (166)
52 cd03817 GT1_UGDG_like This fam 92.9 0.66 1.4E-05 45.0 9.5 91 11-105 270-362 (374)
53 PRK10073 putative glycosyl tra 92.8 1.8 3.9E-05 43.9 12.8 113 166-278 6-122 (328)
54 cd04185 GT_2_like_b Subfamily 92.7 0.97 2.1E-05 41.2 9.8 150 170-348 1-159 (202)
55 cd06439 CESA_like_1 CESA_like_ 92.6 0.4 8.7E-06 45.4 7.3 102 164-268 27-136 (251)
56 cd03804 GT1_wbaZ_like This fam 92.5 0.32 6.9E-06 48.5 6.9 90 12-105 254-347 (351)
57 cd06434 GT2_HAS Hyaluronan syn 92.4 0.32 7E-06 45.3 6.4 108 168-281 2-115 (235)
58 cd04196 GT_2_like_d Subfamily 92.2 1.6 3.4E-05 39.7 10.6 108 169-276 1-115 (214)
59 cd06442 DPM1_like DPM1_like re 91.9 0.29 6.2E-06 45.2 5.3 106 170-275 1-113 (224)
60 cd04949 GT1_gtfA_like This fam 91.8 0.5 1.1E-05 47.4 7.3 91 12-104 271-363 (372)
61 cd02511 Beta4Glucosyltransfera 91.4 0.81 1.7E-05 43.4 7.9 98 167-271 1-101 (229)
62 cd03811 GT1_WabH_like This fam 91.4 0.69 1.5E-05 44.1 7.5 91 12-105 256-351 (353)
63 cd03799 GT1_amsK_like This is 91.4 0.62 1.3E-05 45.6 7.3 93 11-106 247-347 (355)
64 cd04946 GT1_AmsK_like This fam 91.3 0.38 8.1E-06 50.0 6.0 71 33-106 324-397 (407)
65 cd02526 GT2_RfbF_like RfbF is 90.7 2.8 6.1E-05 39.0 10.9 166 170-348 1-189 (237)
66 PLN02949 transferase, transfer 90.5 1.3 2.9E-05 47.2 9.4 105 12-122 347-457 (463)
67 cd06913 beta3GnTL1_like Beta 1 90.3 0.88 1.9E-05 42.3 7.0 107 170-276 1-119 (219)
68 TIGR02095 glgA glycogen/starch 90.2 0.93 2E-05 47.8 7.8 101 13-120 359-471 (473)
69 cd02522 GT_2_like_a GT_2_like_ 90.2 2.4 5.3E-05 38.9 9.8 104 168-277 1-107 (221)
70 TIGR03469 HonB hopene-associat 90.1 0.64 1.4E-05 48.0 6.3 113 166-281 40-173 (384)
71 PF13641 Glyco_tranf_2_3: Glyc 89.9 0.17 3.7E-06 47.1 1.8 169 167-347 2-194 (228)
72 cd03795 GT1_like_4 This family 89.8 0.98 2.1E-05 44.2 7.2 91 12-106 256-352 (357)
73 cd03796 GT1_PIG-A_like This fa 89.8 1.2 2.6E-05 45.6 8.1 107 11-123 261-369 (398)
74 PRK00654 glgA glycogen synthas 89.8 1.2 2.7E-05 47.0 8.4 101 13-120 350-461 (466)
75 cd06437 CESA_CaSu_A2 Cellulose 89.7 1.2 2.6E-05 41.8 7.3 103 167-271 2-116 (232)
76 cd06427 CESA_like_2 CESA_like_ 89.3 1.4 3.1E-05 41.7 7.7 113 167-282 2-125 (241)
77 cd03806 GT1_ALG11_like This fa 89.3 1.6 3.4E-05 45.7 8.6 89 11-103 316-410 (419)
78 PRK15490 Vi polysaccharide bio 89.0 2 4.4E-05 47.0 9.4 106 12-121 465-575 (578)
79 cd04192 GT_2_like_e Subfamily 88.7 0.91 2E-05 41.7 5.7 105 170-275 1-116 (229)
80 TIGR03472 HpnI hopanoid biosyn 88.6 0.99 2.2E-05 46.4 6.4 112 167-279 42-164 (373)
81 cd04187 DPM1_like_bac Bacteria 88.5 0.94 2E-05 40.6 5.5 106 170-275 1-114 (181)
82 cd06421 CESA_CelA_like CESA_Ce 88.4 1.2 2.6E-05 41.3 6.3 166 167-347 2-195 (234)
83 PRK14099 glycogen synthase; Pr 88.3 2.4 5.1E-05 45.5 9.2 103 13-121 362-478 (485)
84 TIGR01556 rhamnosyltran L-rham 88.1 2.8 6.1E-05 40.7 9.0 163 174-347 2-185 (281)
85 PRK09922 UDP-D-galactose:(gluc 87.9 1.3 2.8E-05 44.7 6.7 86 13-100 251-340 (359)
86 cd06433 GT_2_WfgS_like WfgS an 87.5 2.5 5.4E-05 37.6 7.7 100 169-271 1-105 (202)
87 cd03816 GT1_ALG1_like This fam 87.5 1.2 2.5E-05 46.4 6.2 89 11-105 306-403 (415)
88 PRK14098 glycogen synthase; Pr 87.1 2.1 4.6E-05 45.9 8.0 82 14-97 376-465 (489)
89 cd04195 GT2_AmsE_like GT2_AmsE 86.5 1.3 2.7E-05 40.3 5.2 106 169-275 1-115 (201)
90 cd00761 Glyco_tranf_GTA_type G 86.2 1.8 3.9E-05 35.9 5.6 103 170-272 1-108 (156)
91 PLN02726 dolichyl-phosphate be 84.1 3.2 6.9E-05 39.5 6.9 108 165-275 8-128 (243)
92 PF00852 Glyco_transf_10: Glyc 83.9 0.65 1.4E-05 47.7 2.1 71 11-87 219-297 (349)
93 PRK14583 hmsR N-glycosyltransf 83.8 3.5 7.7E-05 43.4 7.7 110 166-279 75-194 (444)
94 PRK10714 undecaprenyl phosphat 83.6 3.7 7.9E-05 41.6 7.4 112 164-276 4-124 (325)
95 TIGR03111 glyc2_xrt_Gpos1 puta 83.6 2.1 4.6E-05 45.1 5.9 102 167-272 50-162 (439)
96 PLN02939 transferase, transfer 83.1 4.6 9.9E-05 46.9 8.6 81 15-97 852-946 (977)
97 cd03793 GT1_Glycogen_synthase_ 82.9 3.2 6.9E-05 45.7 7.0 61 10-71 465-528 (590)
98 PRK05749 3-deoxy-D-manno-octul 81.6 2.2 4.7E-05 44.2 5.1 102 12-121 312-419 (425)
99 PHA01633 putative glycosyl tra 81.5 3.3 7.3E-05 42.4 6.2 48 12-62 216-263 (335)
100 TIGR02918 accessory Sec system 81.3 8.6 0.00019 41.5 9.6 103 12-120 385-498 (500)
101 PRK10125 putative glycosyl tra 80.9 5.7 0.00012 41.5 7.9 101 12-120 299-403 (405)
102 cd03791 GT1_Glycogen_synthase_ 80.8 4 8.6E-05 42.8 6.7 100 13-119 364-474 (476)
103 PLN02605 monogalactosyldiacylg 80.7 4.8 0.0001 41.2 7.2 99 12-122 275-382 (382)
104 TIGR02468 sucrsPsyn_pln sucros 79.3 7.9 0.00017 45.5 8.9 98 21-124 574-673 (1050)
105 TIGR01133 murG undecaprenyldip 77.3 4.5 9.9E-05 40.0 5.6 83 12-99 243-334 (348)
106 PF13692 Glyco_trans_1_4: Glyc 74.9 2.3 5.1E-05 36.0 2.5 67 12-83 63-130 (135)
107 PRK00726 murG undecaprenyldiph 74.3 3.5 7.7E-05 41.3 3.9 104 11-120 244-356 (357)
108 cd04188 DPG_synthase DPG_synth 74.1 4.4 9.5E-05 37.3 4.3 170 170-349 1-194 (211)
109 PLN02316 synthase/transferase 73.9 16 0.00034 43.1 9.4 37 15-51 915-951 (1036)
110 PLN00142 sucrose synthase 73.5 14 0.00031 42.3 8.8 95 21-119 668-768 (815)
111 cd04950 GT1_like_1 Glycosyltra 69.8 8.7 0.00019 39.2 5.7 39 12-51 266-309 (373)
112 PRK13608 diacylglycerol glucos 68.0 10 0.00022 39.1 5.8 99 11-120 265-370 (391)
113 PRK13915 putative glucosyl-3-p 67.9 15 0.00032 37.0 6.7 116 165-280 30-157 (306)
114 COG0438 RfaG Glycosyltransfera 65.5 28 0.00061 32.3 7.8 39 12-52 269-308 (381)
115 KOG1387|consensus 64.3 16 0.00034 38.1 6.0 90 13-104 350-443 (465)
116 cd03812 GT1_CapH_like This fam 61.6 16 0.00034 35.8 5.5 71 11-85 258-328 (358)
117 PRK15179 Vi polysaccharide bio 61.3 34 0.00073 38.7 8.6 102 12-119 584-691 (694)
118 COG1216 Predicted glycosyltran 60.4 36 0.00078 33.8 7.9 108 166-276 3-120 (305)
119 PRK00025 lpxB lipid-A-disaccha 59.5 17 0.00038 36.6 5.5 104 12-122 254-378 (380)
120 COG1215 Glycosyltransferases, 58.8 22 0.00048 36.5 6.2 104 166-272 54-168 (439)
121 TIGR02400 trehalose_OtsA alpha 58.7 43 0.00094 35.7 8.5 82 11-99 347-436 (456)
122 cd06435 CESA_NdvC_like NdvC_li 58.7 28 0.0006 32.3 6.4 105 169-275 1-118 (236)
123 cd06420 GT2_Chondriotin_Pol_N 58.1 20 0.00044 31.6 5.2 96 170-266 1-104 (182)
124 cd03788 GT1_TPS Trehalose-6-Ph 57.9 21 0.00045 38.0 5.9 85 11-100 352-442 (460)
125 TIGR02470 sucr_synth sucrose s 57.8 43 0.00092 38.4 8.6 102 21-135 645-752 (784)
126 cd06438 EpsO_like EpsO protein 56.6 18 0.00039 32.5 4.6 102 170-275 1-115 (183)
127 COG0463 WcaA Glycosyltransfera 55.1 27 0.00059 29.4 5.3 101 166-267 3-108 (291)
128 PF10111 Glyco_tranf_2_2: Glyc 54.5 21 0.00045 35.1 5.0 110 169-278 1-128 (281)
129 cd01635 Glycosyltransferase_GT 50.3 21 0.00045 31.9 3.9 40 12-52 174-213 (229)
130 COG3062 NapD Uncharacterized p 48.6 42 0.00092 28.2 5.0 53 152-204 28-80 (94)
131 cd03785 GT1_MurG MurG is an N- 47.7 40 0.00086 33.3 5.8 84 11-100 244-338 (350)
132 smart00672 CAP10 Putative lipo 47.2 1.4E+02 0.0031 29.3 9.5 100 17-119 143-246 (256)
133 KOG3738|consensus 46.2 50 0.0011 35.0 6.2 106 167-275 124-238 (559)
134 PRK10018 putative glycosyl tra 42.0 56 0.0012 32.4 5.8 103 167-271 6-115 (279)
135 PTZ00260 dolichyl-phosphate be 41.8 76 0.0016 32.2 6.9 104 162-268 66-189 (333)
136 KOG2619|consensus 38.6 30 0.00064 36.2 3.3 77 13-93 244-324 (372)
137 PRK13609 diacylglycerol glucos 38.1 66 0.0014 32.6 5.8 97 12-119 266-369 (380)
138 KOG3185|consensus 34.3 29 0.00063 33.0 2.2 33 19-51 20-52 (245)
139 cd04190 Chitin_synth_C C-termi 31.4 79 0.0017 30.1 4.8 45 239-284 71-115 (244)
140 PF05060 MGAT2: N-acetylglucos 31.2 78 0.0017 33.0 4.9 45 163-208 28-73 (356)
141 PLN03063 alpha,alpha-trehalose 30.9 2E+02 0.0044 33.1 8.7 79 11-95 367-453 (797)
142 PF05686 Glyco_transf_90: Glyc 29.2 2.3E+02 0.0049 29.7 8.1 99 17-118 212-314 (395)
143 cd02514 GT13_GLCNAC-TI GT13_GL 27.7 1.1E+02 0.0025 31.4 5.5 95 170-270 4-129 (334)
144 PF13632 Glyco_trans_2_3: Glyc 26.7 77 0.0017 28.5 3.7 31 245-276 2-33 (193)
145 COG0297 GlgA Glycogen synthase 26.2 60 0.0013 35.2 3.3 38 13-51 362-400 (487)
146 TIGR00236 wecB UDP-N-acetylglu 25.7 1.2E+02 0.0025 30.6 5.2 75 12-96 267-344 (365)
147 COG2247 LytB Putative cell wal 25.6 64 0.0014 33.1 3.1 44 10-55 123-166 (337)
148 cd06436 GlcNAc-1-P_transferase 25.5 1.7E+02 0.0036 26.5 5.7 98 170-271 1-118 (191)
149 PLN02275 transferase, transfer 23.8 81 0.0018 32.1 3.6 40 10-51 297-340 (371)
No 1
>KOG2264|consensus
Probab=100.00 E-value=1.1e-108 Score=840.21 Aligned_cols=403 Identities=37% Similarity=0.648 Sum_probs=366.3
Q ss_pred cccHHhhhccCcEEEe-cCCCCCC-----cchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHh
Q psy16950 10 RYDFQVLLHNSTFCLV-PRGRRLG-----SFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVR 83 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~-p~G~~~~-----s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~ 83 (430)
+.+-.++++.|+|||+ |+|++-- -.||+|||+.||||||+++...|||+|.|||+++++++|..++.+++.+|+
T Consensus 407 ~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE~HFllr 486 (907)
T KOG2264|consen 407 RERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTEAHFLLR 486 (907)
T ss_pred hHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhhhCCccccchHHHHHH
Confidence 3467899999999996 6777631 269999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHhhcccccc-----------------------------------
Q psy16950 84 SISATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRDRLPRQKT----------------------------------- 128 (430)
Q Consensus 84 ~i~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~Ri~~~~~----------------------------------- 128 (430)
++.+.|+.+||||+|++||+||++...+++|+|+.||.|+. +++
T Consensus 487 s~~dsDll~mRRqGRl~wEtYls~~~~~~~tvlA~lR~rlq-IP~rpvr~~~A~~~fnssf~p~gsdpnv~~n~d~e~~l 565 (907)
T KOG2264|consen 487 SFEDSDLLEMRRQGRLFWETYLSDRHLLARTVLAALRYRLQ-IPTRPVRRNQAIPLFNSSFAPKGSDPNVQANFDDEYLL 565 (907)
T ss_pred hcchhhHHHHHhhhhhhHHHHhhHHHHHHHHHHHHHHHhhC-CCCcccchhhceecccccCCcCCCCCCcccCCCccccc
Confidence 99999999999999999999999999999999999999996 111
Q ss_pred ---------------------CCCCCCCCCCCCccccccCCCCC---CCCCcc----------------------ccCCC
Q psy16950 129 ---------------------KTGLTWNWSPGALLVHSQFSDST---ADYPFY----------------------ASFEP 162 (430)
Q Consensus 129 ---------------------~~~~~WN~~Pg~l~~~p~~~~~~---~~~P~~----------------------~~~~~ 162 (430)
..|+.||..+|+.+..|....++ +..-|+ +..|+
T Consensus 566 gp~Eppy~Sp~y~rNfT~~~~~~y~~WN~~~~Pfyl~p~lpfdp~LPsEAkF~gs~tGFRPIg~g~gGsGkEF~~aLGGN 645 (907)
T KOG2264|consen 566 GPLEPPYESPSYARNFTEFQLYSYDFWNIIMSPFYLKPFLPFDPELPSEAKFFGSKTGFRPIGPGAGGSGKEFSKALGGN 645 (907)
T ss_pred CCCCCCCCCchHhhhhhhhhhHHHHHhhhcCCccccCccCCCCccCcchhhhhccCcCcccCCCCCCCchHHHHHHhcCC
Confidence 13578999888888776443322 122222 12245
Q ss_pred CCCCceEEEEEec-cchHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcccc-----CCCccccccccc
Q psy16950 163 NASEQFTAIIYAQ-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-----THITDISHRFLH 236 (430)
Q Consensus 163 ~~~~~fTvvi~ty-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-----~~~nsLnnRF~p 236 (430)
.+.+||||||+|| |.+.|+..|..+.+.|+++|||||||+| ++||+.|. ||+++|| .++|||||||.|
T Consensus 646 ~pREQFTvVmLTYERe~VLm~sLeRL~gLPYLnKvvVVWNsp-k~P~ddl~-----WPdigvPv~viR~~~NsLNNRFlP 719 (907)
T KOG2264|consen 646 RPREQFTVVMLTYEREAVLMGSLERLHGLPYLNKVVVVWNSP-KDPPDDLT-----WPDIGVPVEVIRVAENSLNNRFLP 719 (907)
T ss_pred CccceEEEEEEEehHHHHHHHHHHHhhCCcccceEEEEeCCC-CCChhccc-----CcCCCCceEEEEcccccccccccC
Confidence 6789999999999 8899999999999999999999999996 45565532 9999988 899999999999
Q ss_pred CCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhh
Q psy16950 237 TSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNY 316 (430)
Q Consensus 237 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~ 316 (430)
++.|+|+||||+|||+.+..|||-|||+|||+++||||||++|.|.||..+++|-|+++++|+.|||||||||+||||++
T Consensus 720 wd~IETEAvLS~DDDahLrhdEI~fgFRVWRE~RDRiVGFPgRyHAwd~p~~sw~YNSNysCelSMvLTGAAF~HKyYly 799 (907)
T KOG2264|consen 720 WDRIETEAVLSLDDDAHLRHDEIIFGFRVWRENRDRIVGFPGRYHAWDGPHDSWFYNSNYSCELSMVLTGAAFIHKYYLY 799 (907)
T ss_pred chhhhheeeeecccchhhhhhheeeeeehhhhcccccccCCcccccccCCCcceeecCCcceEEeeeehhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccchHHHHHHhhccCCchhHHHHHHHHhhcCCCCeeeeccceeeccCCCCCCCCCCCCcchHHHHHHHHHHHHHhCC
Q psy16950 317 LYSHWLSPLLLKTVAQSHNCEDILMNFLVSHVTRRPPIKVTGRKHYKETSGGGSRSPWNDPDHFIQRQTCLNTFAAVFGY 396 (430)
Q Consensus 317 ~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~~T~~pPi~V~~~~~~~~~~~~~~~s~~~~~~H~~~R~~Cln~f~~~fG~ 396 (430)
+||..||++||++||+.+|||||||||||||+|+|||||||+|++++||+|. .|++.+..||.+|++|||.|++.|||
T Consensus 800 lYtY~mPqaIRd~Vdey~NCEDIAMNfLVSHiTRKPPiKvTSRWTfrCPgCp--~sLs~ddtHF~eRHkCinfF~kvyGY 877 (907)
T KOG2264|consen 800 LYTYEMPQAIRDHVDEYKNCEDIAMNFLVSHITRKPPIKVTSRWTFRCPGCP--ESLSKDDTHFEERHKCINFFTKVYGY 877 (907)
T ss_pred hhhhhchHHHHHHHHhhcCHHHHHHHHHHHHhccCCCceeeceeEEeCCCCc--hhhccCCchHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999988 46668999999999999999999999
Q ss_pred CCccceeeeeccccccCCCCccccc
Q psy16950 397 MPLLRSHMRLDPVLYKDPVSNLRKK 421 (430)
Q Consensus 397 mPL~~s~~r~dpvl~k~~~~~~~k~ 421 (430)
|||++||+|+|++|||+++|..++|
T Consensus 878 ~PLl~tQfRaDSiLFKTRlPhdkqK 902 (907)
T KOG2264|consen 878 NPLLFTQFRADSILFKTRLPHDKQK 902 (907)
T ss_pred ChhhhhhhhhhheeeeccCCcchhh
Confidence 9999999999999999999997765
No 2
>KOG1022|consensus
Probab=100.00 E-value=2e-102 Score=792.33 Aligned_cols=392 Identities=32% Similarity=0.551 Sum_probs=368.9
Q ss_pred ccccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcCCHH
Q psy16950 9 FRYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSISAT 88 (430)
Q Consensus 9 ~~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i~~~ 88 (430)
+..+|...+...+||+.-||.+.+++.+.+.+.+||+|||..|.+.|||++++||..+||+++|..+..+.+.|++++..
T Consensus 294 ~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~v~~~l~~i~~~ 373 (691)
T KOG1022|consen 294 FDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGKVMDALLNIETA 373 (691)
T ss_pred cccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEeehhhHHHHHHHhhcchhc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHhhccccccCCCCCCCCCCCCccccccCCCCCCCCCccccCCCCCCCce
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEIIRDRLPRQKTKTGLTWNWSPGALLVHSQFSDSTADYPFYASFEPNASEQF 168 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~Ri~~~~~~~~~~WN~~Pg~l~~~p~~~~~~~~~P~~~~~~~~~~~~f 168 (430)
.+.+||.|.+..|.++|.++...+.++++++..|+.+..++++..|| +|..+.- +.+.|.+.++.....++|
T Consensus 374 ~i~sl~~r~~~~rl~rf~~~~~~~l~~~~~i~~~llp~v~~s~~~w~--~~~~~~~------s~s~~~~~~~ik~~~qgF 445 (691)
T KOG1022|consen 374 GICSLQLRRIGSRLNRFPPFKRGFLLLLSSIGKRLLPVVAISSRLWN--VGVRYIY------SGSNPLFLPPIKGHSQGF 445 (691)
T ss_pred chhhhhhhhhhhhHhhcchHHHHHHHHHHHHhhhhhheeeecccccc--ccceecc------cCCCccccCCCCCcccce
Confidence 99999999999999999999999999999999999999999999999 4444332 223344445566788999
Q ss_pred EEEEEec-cchHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcccc-----CCCcccccccccCCCCCC
Q psy16950 169 TAIIYAQ-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-----THITDISHRFLHTSLVTT 242 (430)
Q Consensus 169 Tvvi~ty-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-----~~~nsLnnRF~p~~~i~T 242 (430)
|++|+|| |.+.|+++|+||++||+|+||+|||||.++.||+. +- +|.+.|| ++.|+|||||.|+++|+|
T Consensus 446 Tlim~TYdR~d~L~k~v~~ys~vPsL~kIlVVWNnq~k~PP~e-s~----~~~~~VPlr~r~qkeNsLnNRF~~~peieT 520 (691)
T KOG1022|consen 446 TLIMLTYDRVDLLKKLVKHYSRVPSLKKILVVWNNQGKNPPPE-SL----EPDIAVPLRFRQQKENSLNNRFEPYPEIET 520 (691)
T ss_pred eeeeehHHHHHHHHHHHHHHhhCCCcceEEEEecCCCCCCChh-hc----cccCCccEEEEehhhhhhhcccccCccccc
Confidence 9999999 99999999999999999999999999977777766 32 6777777 899999999999999999
Q ss_pred ceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhhhhcccc
Q psy16950 243 NAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNYLYSHWL 322 (430)
Q Consensus 243 ~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~~Y~~~~ 322 (430)
+|||.+|||++++|+||+|||+|||+||||||||+||-|.|+....+|.|.++|+++||||||||||+|++|+++|++.|
T Consensus 521 ~AVL~IDDDIim~~ddldFgf~VWrefPD~lVGF~pR~H~~t~s~~k~~y~sewt~qySMVLtGAAFfhk~y~~lYt~~m 600 (691)
T KOG1022|consen 521 EAVLEIDDDIIMPCDDLDFGFEVWREFPDRLVGFVPRFHVWTMSYSKWKYESEWTNQYSMVLTGAAFFHKKYLDLYTSDM 600 (691)
T ss_pred ceeEEecCceeeecchhHHHHHHHHhCccceeccCcceeecccccchhhheeecCCceEEEEechhHHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhccCCchhHHHHHHHHhhcCCCCeeeeccceeeccCCCCCCCCCCCCcchHHHHHHHHHHHHHhCCCCccce
Q psy16950 323 SPLLLKTVAQSHNCEDILMNFLVSHVTRRPPIKVTGRKHYKETSGGGSRSPWNDPDHFIQRQTCLNTFAAVFGYMPLLRS 402 (430)
Q Consensus 323 p~~ir~~VD~~~NCEDIaMNflVs~~T~~pPi~V~~~~~~~~~~~~~~~s~~~~~~H~~~R~~Cln~f~~~fG~mPL~~s 402 (430)
|+.+|++||+++|||||||||||||+||+|+|+|++++.++|+.++|.+++|.+.+|+.+|+.|||+|+++||.|||+++
T Consensus 601 Pa~ir~~vDe~~NCEDIAMNFLiANatg~~aI~Vkp~~~~~~~~~sg~~gls~~~~H~~kRS~CInrFv~iyGsMPLr~~ 680 (691)
T KOG1022|consen 601 PADIRVFVDEHMNCEDIAMNFLIANATGKPAIKVKPRKKFKCPECSGVAGLSNDNQHMRKRSKCINRFVDIYGSMPLRYV 680 (691)
T ss_pred cchHHHhhhcccCHHHHHHHHHhhhccCCCceEEeCcccccCcccccceeeccchHHHHHHHHHHHHHHHHhcCCceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccccC
Q psy16950 403 HMRLDPVLYKD 413 (430)
Q Consensus 403 ~~r~dpvl~k~ 413 (430)
++|+||++|++
T Consensus 681 e~~a~~~~~~~ 691 (691)
T KOG1022|consen 681 EFRADPVGFDD 691 (691)
T ss_pred EeeeccccCCC
Confidence 99999999985
No 3
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=100.00 E-value=4.3e-84 Score=627.51 Aligned_cols=238 Identities=48% Similarity=0.927 Sum_probs=193.6
Q ss_pred eEEEEEe-c-cchHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcccc-----CCCcccccccccCCCC
Q psy16950 168 FTAIIYA-Q-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-----THITDISHRFLHTSLV 240 (430)
Q Consensus 168 fTvvi~t-y-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-----~~~nsLnnRF~p~~~i 240 (430)
|||||+| | |.+.|.++|++|+++|+|+||+||||| +.++|+. .. |+..+|| +++|||||||+|+++|
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l~~IvVvWn~-~~~~P~~-~~----~~~~~vpV~~~~~~~nsLnnRF~p~~~i 74 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSLRKIVVVWNN-PNPPPPS-SK----WPSTGVPVRVVRSSRNSLNNRFLPDPEI 74 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTEEEEEEEEE--TS--THH-HH----HT---S-EEEEEESSHHGGGGGS--TT-
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCCCeEEEEeCC-CCCCCcc-cc----cCCCCceEEEEecCCccHHhcCcCcccc
Confidence 8999999 8 889999999999999999999999999 7677765 33 6665555 8999999999999999
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhhhhcc
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNYLYSH 320 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~~Y~~ 320 (430)
+|+|||++|||+.++++||||||++||+||||||||+||+|.|++.+++|.|+++|+++||||||||||+||+||++|++
T Consensus 75 ~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVGf~~R~h~~~~~~~~~~Y~~~~~~~ySmvLt~aaf~h~~yl~~Y~~ 154 (247)
T PF09258_consen 75 ETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVGFPPRSHSWDPSSGRWKYTSEWSNEYSMVLTGAAFYHRYYLELYTH 154 (247)
T ss_dssp -SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEES-EEEEEEE-ETTEEEEE-SSS--BSEE-TTEEEEETHHHHHHHT
T ss_pred CcceEEEecCCcccCHHHHHHHHHHHHhChhheeCCccceeecCCCccccccccCCCCcchhhhhhhHhhcchHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHhhccCCchhHHHHHHHHhhcCCCCeeeeccceeeccCCCC--CCCCCCCCcchHHHHHHHHHHHHHhCCCC
Q psy16950 321 WLSPLLLKTVAQSHNCEDILMNFLVSHVTRRPPIKVTGRKHYKETSGGG--SRSPWNDPDHFIQRQTCLNTFAAVFGYMP 398 (430)
Q Consensus 321 ~~p~~ir~~VD~~~NCEDIaMNflVs~~T~~pPi~V~~~~~~~~~~~~~--~~s~~~~~~H~~~R~~Cln~f~~~fG~mP 398 (430)
.+|+++|++||+++||||||||||||++||+|||||++++.+.+..+.+ ..|+|.+++|+++|++|||+|+++||+||
T Consensus 155 ~~p~~~r~~Vd~~~NCEDI~mNflvs~~T~~pPi~v~~~~~~~~~~~~~~~~~gls~~~~H~~~R~~Cln~f~~~fG~mP 234 (247)
T PF09258_consen 155 WLPASIREYVDEHFNCEDIAMNFLVSNLTGKPPIKVTSRKKFKCSKCSGGGSSGLSSRPGHFKQRSKCLNRFAEIFGYMP 234 (247)
T ss_dssp -S-HHHHHHHHHHTS-HHHHHHHHHHHHHSS-SE--SSEEE-TTSSSS------CCCSTCHHHHHHHHHHHHHHHTTS--
T ss_pred CcHHHHHHHHhccCCHHHHHHHHHHHHhccCCCCcccccceeeccccccccccCCCCCchhHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999998776543 57889999999999999999999999999
Q ss_pred ccceeeeeccccc
Q psy16950 399 LLRSHMRLDPVLY 411 (430)
Q Consensus 399 L~~s~~r~dpvl~ 411 (430)
|++|++|+|||||
T Consensus 235 L~~s~~r~d~~l~ 247 (247)
T PF09258_consen 235 LVYSQFRADPVLF 247 (247)
T ss_dssp ---B-EEEEETTC
T ss_pred ceeEeEEecCCcC
Confidence 9999999999998
No 4
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=99.86 E-value=1.3e-22 Score=199.60 Aligned_cols=76 Identities=49% Similarity=0.865 Sum_probs=73.8
Q ss_pred cccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC
Q psy16950 10 RYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i 85 (430)
..+|.+.|++|+|||||+|+++++.||+|||++|||||||+|++.|||+++|||++|+|+|+++++++|+++|++|
T Consensus 227 ~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 227 PSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI 302 (302)
T ss_pred chHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence 4579999999999999999999999999999999999999999999999999999999999999999999999986
No 5
>KOG1021|consensus
Probab=99.83 E-value=8e-21 Score=199.98 Aligned_cols=117 Identities=28% Similarity=0.545 Sum_probs=105.9
Q ss_pred cccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccH-HHHHhcCCHH
Q psy16950 10 RYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQV-PDTVRSISAT 88 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l-~~~L~~i~~~ 88 (430)
...|.+.|++|+|||||+|++++|.|++||+.+|||||||+|++++||++++||++|||+++++++++. .++|.+++.+
T Consensus 334 ~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~ 413 (464)
T KOG1021|consen 334 PLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEE 413 (464)
T ss_pred cchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHHHh--h-----hhhHHHHhHHHHHHhhcccc
Q psy16950 89 QVLAARQQTQVLWERYF--S-----SIEKIVFTTFEIIRDRLPRQ 126 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf--~-----s~~~i~~t~l~il~~Ri~~~ 126 (430)
++.+||+++....++.| . ..+++++-+++.+..|+...
T Consensus 414 ~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~ 458 (464)
T KOG1021|consen 414 EVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKL 458 (464)
T ss_pred HHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccc
Confidence 99999999987556644 2 23578888888888887643
No 6
>KOG1021|consensus
Probab=98.15 E-value=2.9e-08 Score=105.18 Aligned_cols=292 Identities=18% Similarity=0.207 Sum_probs=187.0
Q ss_pred cchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcCCHHHHHHHHHHHHHHHHHHhhhhhHHH
Q psy16950 33 SFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSISATQVLAARQQTQVLWERYFSSIEKIV 112 (430)
Q Consensus 33 s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i~~~~i~~mr~~~~~l~~~yf~s~~~i~ 112 (430)
..|..|+..| |-+.+||...++|.++...-.+. ....++.+..+++..+ .+.+..|.++.+..+.++
T Consensus 155 ~~Rt~dp~~A--------d~f~vPf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~-~~~~p~W~Rs~G~DH~~v 221 (464)
T KOG1021|consen 155 AFRTLDPLEA--------DAFYVPFYASLDYNRALLWPDER----VNAILRSILQDYIVAL-LSKQPYWNRSSGRDHFFV 221 (464)
T ss_pred ceecCChhhC--------cEEEEcceeeEehhhhcccCCcc----cchHHHHHHHHHHHHH-HhcCchhhccCCCceEEE
Confidence 4556666555 55789999999998887766554 3334555556777777 566779999999999999
Q ss_pred HhHHHHHHhhccccccCCCCCCCCCCCCccccccCCC-CCCCCCcccc-----------CCCCCCCceEEEEEec-c-c-
Q psy16950 113 FTTFEIIRDRLPRQKTKTGLTWNWSPGALLVHSQFSD-STADYPFYAS-----------FEPNASEQFTAIIYAQ-L-G- 177 (430)
Q Consensus 113 ~t~l~il~~Ri~~~~~~~~~~WN~~Pg~l~~~p~~~~-~~~~~P~~~~-----------~~~~~~~~fTvvi~ty-r-~- 177 (430)
.+.......|.....+..-..|+..+++.+.....+. .....|+... ++..+..+-+++..=- + .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~ 301 (464)
T KOG1021|consen 222 ACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAG 301 (464)
T ss_pred eCCcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccC
Confidence 9988888888865555555666666555555444444 4445555411 1112223444433222 2 1
Q ss_pred hHHHH-HHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCccccCCCccc-ccccccCCCCCCceEEEecCCCCCC
Q psy16950 178 TSLYK-VIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHILTHITDI-SHRFLHTSLVTTNAVLSLDEDATLN 255 (430)
Q Consensus 178 ~~L~~-~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp~~~nsL-nnRF~p~~~i~T~AVl~~DDDv~~~ 255 (430)
..+.. ++++..+ |++. . .. . .++ .++. ..|+.++.++-++++|.++=.-..+
T Consensus 302 ~~iR~~L~~~~~~----------~~~~--~--~~-~---------~~~--~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ 355 (464)
T KOG1021|consen 302 GQIRSILLDLWKK----------DPDT--E--VF-V---------NCP--RGKVSCDRPLNYMEGMQDSKFCLCPPGDTP 355 (464)
T ss_pred CcHHHHHHHHhhc----------CcCc--c--cc-c---------cCC--CCccccCCcchHHHHhhcCeEEECCCCCCc
Confidence 12222 2222222 4441 0 01 0 111 1111 5788999999999999999998888
Q ss_pred hHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhhhhcccchHHHHHHhhccCC
Q psy16950 256 TDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNYLYSHWLSPLLLKTVAQSHN 335 (430)
Q Consensus 256 ~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~~Y~~~~p~~ir~~VD~~~N 335 (430)
...-.|..-+|.-.|-.|.+. -...|.+..+|+ .||++++ ...+++. +.+.+...-++-| ...
T Consensus 356 ts~R~fdai~~gCvPViisd~---------~~lpf~~~~d~~-~fSV~v~-~~~v~~~----~~~iL~~i~~~~~--~~m 418 (464)
T KOG1021|consen 356 TSPRLFDAIVSGCVPVIISDG---------IQLPFGDVLDWT-EFSVFVP-EKDVPEL----IKNILLSIPEEEV--LRM 418 (464)
T ss_pred ccHhHHHHHHhCCccEEEcCC---------cccCcCCCccce-EEEEEEE-HHHhhhH----HHHHHHhcCHHHH--HHH
Confidence 888889999999999999997 346799999999 9999999 8888887 3333333222222 578
Q ss_pred chhHHHHHHHHhhcCCCCeeeeccceeeccCCCCCCCCCCCCcchHHHHH
Q psy16950 336 CEDILMNFLVSHVTRRPPIKVTGRKHYKETSGGGSRSPWNDPDHFIQRQT 385 (430)
Q Consensus 336 CEDIaMNflVs~~T~~pPi~V~~~~~~~~~~~~~~~s~~~~~~H~~~R~~ 385 (430)
|+++++ ++..+++.+|| +.....+..-.-..++|.+..+...+..
T Consensus 419 ~~~v~~-~v~r~~~~~~~----~~~~~~da~~~~~~~v~~r~~~~~~~~~ 463 (464)
T KOG1021|consen 419 RENVIR-LVPRHFLKKPP----GPPKRGDAFHMILHSLWRRLHKLRSRRR 463 (464)
T ss_pred HHHHHH-HHHhhEEeCCC----CCCCcchhHHHHHhhhhhcccccccccc
Confidence 999999 99999999997 2222222211122457777766665443
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.11 E-value=0.0021 Score=61.60 Aligned_cols=105 Identities=14% Similarity=0.143 Sum_probs=76.3
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.++.+.|.+|.+.++|.-.......++||+++|| |||.++. -.+.+.+.-....+.++..+..++.+.|..+ .++
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE 343 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH
Confidence 5688899999999999765555678999999997 6776664 3456666656677888887777777776663 466
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
...+|.++++....+.| +.+++....++++
T Consensus 344 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 373 (374)
T cd03801 344 LRRRLGEAARERVAERF-SWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHHHHhc-CHHHHHHHHHHhh
Confidence 77888888886666666 4556666555544
No 8
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.76 E-value=0.0056 Score=59.70 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=70.8
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.+..+.|+.|..|++|.+.......++|||++|| |||.++.- ...+.+.=....+.++..+..++.+.+..+ .++
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAG--GPADIVTDGENGLLVEPGDAEAFAAALAALLADPE 334 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCC--CchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHH
Confidence 3566789999999999876655678999999999 78877743 234444323456667776666555555543 567
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
...+|+++++...++ | +.+.+....++++
T Consensus 335 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 363 (364)
T cd03814 335 LRRRMAARARAEAER-R-SWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHHHhh-c-CHHHHHHHHHHhh
Confidence 788888888776544 2 3455556655544
No 9
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.54 E-value=0.0098 Score=58.16 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=71.8
Q ss_pred ccHHhhhccCcEEEecCCCC--CCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--C
Q psy16950 11 YDFQVLLHNSTFCLVPRGRR--LGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--S 86 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~--~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~ 86 (430)
.+..+.|+.|.+++.|.... ..+..++|||++|+ |||.++.-. .+++.+ ....+.++..+..++.+.|..+ .
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~-~~~g~~~~~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLD-GGTGLLVPPGDPAALAEAIRRLLAD 334 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeee-CCCcEEEcCCCHHHHHHHHHHHHcC
Confidence 35678999999999997655 55678999999999 999887432 333334 3345667766676766666553 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 87 ATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 87 ~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+++..+|+++++..-+. | +.++++....+++
T Consensus 335 ~~~~~~~~~~~~~~~~~-~-s~~~~~~~~~~~~ 365 (366)
T cd03822 335 PELAQALRARAREYARA-M-SWERVAERYLRLL 365 (366)
T ss_pred hHHHHHHHHHHHHHHhh-C-CHHHHHHHHHHHh
Confidence 46788899888877766 4 4556666555543
No 10
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.34 E-value=0.024 Score=56.41 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=71.8
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+..+.|+.|..+++|.-......-++|||++| +|||.++.- ...+++.-..-...++..+..++.+.+..+ .++.
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAG--GIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL 339 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC--CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 57788999999999964433456799999999 788888753 345555544455667776776666655443 5677
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 90 VLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
..+|+++++......|+ .+.+..-.+++++
T Consensus 340 ~~~~~~~~~~~~~~~fs-~~~~~~~~~~~y~ 369 (371)
T cd04962 340 WQEFSRAARNRAAERFD-SERIVPQYEALYR 369 (371)
T ss_pred HHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH
Confidence 88999888876555553 4455555555443
No 11
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.29 E-value=0.025 Score=56.93 Aligned_cols=107 Identities=16% Similarity=0.144 Sum_probs=72.6
Q ss_pred cccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CH
Q psy16950 10 RYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SA 87 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~ 87 (430)
..+..+.|+.|..+++|.-......-++|||++|+ |||.+|.- ...++++-......++..+..++.+.|..+ .+
T Consensus 263 ~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~--g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 263 RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG--GNPELVQHGVTGALVPPGDAVALARALQPYVSDP 339 (374)
T ss_pred cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC--CcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 35678889999999888543333467999999996 99988842 345555545567777777777766666543 45
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 88 TQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 88 ~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
++..+|.++++..-+..|+ .+.++...+++.+
T Consensus 340 ~~~~~~~~~a~~~~~~~fs-~~~~~~~~~~~y~ 371 (374)
T TIGR03088 340 AARRAHGAAGRARAEQQFS-INAMVAAYAGLYD 371 (374)
T ss_pred HHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH
Confidence 6677787787776666663 4555555555543
No 12
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.27 E-value=0.013 Score=57.87 Aligned_cols=93 Identities=11% Similarity=0.050 Sum_probs=69.7
Q ss_pred cccHHhhhccCcEEEecC--CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHh-c--
Q psy16950 10 RYDFQVLLHNSTFCLVPR--GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVR-S-- 84 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~--G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~-~-- 84 (430)
..+..+.|+.|..+++|. ..+. ..-++|||++|| |||+++. -+..+.+.-....+.++..+...+.+.|. .
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~-~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAF-GRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILS 329 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCC-chHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 346788999999999986 2333 367999999999 8877763 34566665555677778778887777663 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHhh
Q psy16950 85 ISATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 85 i~~~~i~~mr~~~~~l~~~yf~ 106 (430)
.++++..+|+++++...++.|+
T Consensus 330 ~~~~~~~~~~~~a~~~~~~~f~ 351 (355)
T cd03819 330 LLPEGRAKMFAKARMCVETLFS 351 (355)
T ss_pred hCHHHHHHHHHHHHHHHHHhhh
Confidence 3688999999999988888774
No 13
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=96.19 E-value=0.017 Score=56.08 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=68.0
Q ss_pred ccHHhhhccCcEEEecC--CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--C
Q psy16950 11 YDFQVLLHNSTFCLVPR--GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--S 86 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~--G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~ 86 (430)
.+..+.++.|..+++|. +.+. ...++|||++| +|||.++.- ...+.++-....+.++..+..++.+.+..+ .
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~-~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENF-PLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDD 329 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCC-ChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC
Confidence 45677899999999996 3443 46899999999 677777632 345566655567788887777666555443 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 87 ATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 87 ~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
++...+|+++++...+. +++....++++
T Consensus 330 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 357 (359)
T cd03823 330 PDLLERLRAGIEPPRSI-----EDQAEEYLKLY 357 (359)
T ss_pred hHHHHHHHHhHHHhhhH-----HHHHHHHHHHh
Confidence 67778888777654433 44555555554
No 14
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.16 E-value=0.021 Score=55.18 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=68.9
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.+..++|+.+..+++|......+.-++||+++|| |||.++.-. ..+.++ ...+.++..+..++.+.+..+ .++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~--~~e~~~--~~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD--NAELVG--DTGFLVPPGDPEALAEAIEALLADPA 334 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC--hHHHhh--cCCEEeCCCCHHHHHHHHHHHHhChH
Confidence 4577899999999999776555678999999996 788776321 233332 145566666666665555443 346
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHH
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEI 118 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~i 118 (430)
+..+|.++++...+..| +.+.+....+++
T Consensus 335 ~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~ 363 (365)
T cd03807 335 LRQALGEAARERIEENF-SIEAMVEAYEEL 363 (365)
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHH
Confidence 77888888887777777 455555555554
No 15
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.98 E-value=0.0076 Score=53.80 Aligned_cols=84 Identities=17% Similarity=0.251 Sum_probs=55.4
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcCC--HHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSIS--ATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i~--~~~ 89 (430)
+..++++.|.+.++|......+..++|||.+|| |||+++. -.+.+.+.=..-.+.++..+..++.+.+..+- ++.
T Consensus 85 ~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~ 161 (172)
T PF00534_consen 85 ELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDI--GGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPEL 161 (172)
T ss_dssp HHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESS--THHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceecccccccccccccccccccccc-ceeeccc--cCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHHH
Confidence 677889999999999887777789999999999 6666762 22233332122356666667777776666553 355
Q ss_pred HHHHHHHHH
Q psy16950 90 VLAARQQTQ 98 (430)
Q Consensus 90 i~~mr~~~~ 98 (430)
..+|+++++
T Consensus 162 ~~~l~~~~~ 170 (172)
T PF00534_consen 162 RQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 667776665
No 16
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=95.98 E-value=0.016 Score=55.80 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=65.0
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC-CHHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI-SATQV 90 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i-~~~~i 90 (430)
+..+.+.+|.++++|.........++||+++|| |||.++.- ...+.+.-....+.+...+..++.+.|..+ ...+.
T Consensus 271 ~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 271 EVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVG--GIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL 347 (377)
T ss_pred HHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCC--ChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH
Confidence 467889999999999766555678999999999 67766632 233444444445677777777666555443 22333
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 91 LAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 91 ~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+|.++.+......|+ .+.+.....+++
T Consensus 348 -~~~~~~~~~~~~~~s-~~~~~~~~~~~~ 374 (377)
T cd03798 348 -RLGRAARRRVAERFS-WENVAERLLELY 374 (377)
T ss_pred -HHhHHHHHHHHHHhh-HHHHHHHHHHHH
Confidence 566666655555553 334444444444
No 17
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.96 E-value=0.021 Score=55.58 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=64.5
Q ss_pred ccHHhhhccCcEEEecCCCCCC-----cchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLG-----SFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~-----s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i 85 (430)
.++.+.|+.+.++++|...... ...++||+++|| |||.++.-.. .+.+.=....+.++..+..++.+.|..+
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~~ 362 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGDPEALAAAILEL 362 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCCHHHHHHHHHHH
Confidence 3567889999999999765532 456899999997 8887764322 2222212456667776777777766665
Q ss_pred --CHHHHHHHHHHHHHHHHHHhh
Q psy16950 86 --SATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 86 --~~~~i~~mr~~~~~l~~~yf~ 106 (430)
.+++..+|.++++......|+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~s 385 (394)
T cd03794 363 LDDPEERAEMGENGRRYVEEKFS 385 (394)
T ss_pred HhChHHHHHHHHHHHHHHHHhhc
Confidence 678888999888877765553
No 18
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=95.91 E-value=0.047 Score=49.71 Aligned_cols=112 Identities=17% Similarity=0.168 Sum_probs=67.8
Q ss_pred ceEEEEEec-cc-hHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcc-cccccCCCCCccc-cCCCc-cc-ccccccCCC
Q psy16950 167 QFTAIIYAQ-LG-TSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAF-LSRHNATLPPIHI-LTHIT-DI-SHRFLHTSL 239 (430)
Q Consensus 167 ~fTvvi~ty-r~-~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~-l~~~~~~~p~~~V-p~~~n-sL-nnRF~p~~~ 239 (430)
++|++|-+| +. +.|.+.|+++.+...- -+|+||.++...+.... +..+....+.+.+ ..+.| .. .++-.-...
T Consensus 2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~ 81 (202)
T cd04184 2 LISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALEL 81 (202)
T ss_pred eEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHHHHh
Confidence 478999999 66 7788888888665443 48999988832211111 1111111122221 11111 11 111122234
Q ss_pred CCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCC
Q psy16950 240 VTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPA 278 (430)
Q Consensus 240 i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~ 278 (430)
.++|-|+.+|+|..+.++-|+...+...++|+.-+.+..
T Consensus 82 a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~ 120 (202)
T cd04184 82 ATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSD 120 (202)
T ss_pred hcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEcc
Confidence 678999999999999999999999999777765333333
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.89 E-value=0.044 Score=57.01 Aligned_cols=104 Identities=12% Similarity=0.211 Sum_probs=74.2
Q ss_pred cHHhhhccCcEEEecCC-------CCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc
Q psy16950 12 DFQVLLHNSTFCLVPRG-------RRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS 84 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G-------~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~ 84 (430)
+..+.++.+..++.|.= .|. ..-++|||++|+ |||.++.-- ..|.|.=..-.+.+++.+..++.+.+..
T Consensus 291 el~~~l~~aDv~v~pS~~~~~g~~Eg~-p~~llEAma~G~-PVI~t~~~g--~~E~v~~~~~G~lv~~~d~~~la~ai~~ 366 (406)
T PRK15427 291 EVKAMLDDADVFLLPSVTGADGDMEGI-PVALMEAMAVGI-PVVSTLHSG--IPELVEADKSGWLVPENDAQALAQRLAA 366 (406)
T ss_pred HHHHHHHhCCEEEECCccCCCCCccCc-cHHHHHHHhCCC-CEEEeCCCC--chhhhcCCCceEEeCCCCHHHHHHHHHH
Confidence 46778999999999852 233 357999999995 999887432 2344533445677888888887777665
Q ss_pred C---CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 85 I---SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 85 i---~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
+ ++++..+|.++++...+..|+ .+.+.....++++
T Consensus 367 l~~~d~~~~~~~~~~ar~~v~~~f~-~~~~~~~l~~~~~ 404 (406)
T PRK15427 367 FSQLDTDELAPVVKRAREKVETDFN-QQVINRELASLLQ 404 (406)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHh
Confidence 4 667789999999988887773 5566666666654
No 20
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.88 E-value=0.029 Score=53.66 Aligned_cols=92 Identities=8% Similarity=0.042 Sum_probs=62.4
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.+..+.|+++.+++.|.........++|||++||-+| .++....+ +++++-....+.++..+..++.+.+..+ .++
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVI-SFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEE-EecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 4677899999999999755444578999999998654 55532222 2233333466777777777776666665 577
Q ss_pred HHHHHHHHHHHHHHHH
Q psy16950 89 QVLAARQQTQVLWERY 104 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~y 104 (430)
...+|.++++..-++|
T Consensus 322 ~~~~~~~~~~~~~~~~ 337 (348)
T cd03820 322 LRKRMGANARESAERF 337 (348)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7888888886655443
No 21
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.74 E-value=0.047 Score=52.46 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=63.9
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.+..+.++.|.++++|.........++||+++|| |||.++.-. ..+.+.=....+.++..+..++.+.+..+ .++
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~--~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~ 331 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPG--CREAVIDGVNGFLVPPGDAEALADAIERLIEDPE 331 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCC--chhhhhcCcceEEECCCCHHHHHHHHHHHHhCHH
Confidence 4577889999999999765444578999999995 777776432 23333313445667766676666666553 467
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy16950 89 QVLAARQQTQVLWERYFS 106 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~ 106 (430)
...+|.++++..+...|+
T Consensus 332 ~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 332 LRARMGQAARKRAEEEFD 349 (359)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 788888888777666653
No 22
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=95.73 E-value=0.0069 Score=52.26 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=70.9
Q ss_pred EEEEEec-cchHHHHHHHHHhcc-cccceEEEEcCCCCCCCCcccccccCCCCCcccc-CCC--cccccccccCCCCCCc
Q psy16950 169 TAIIYAQ-LGTSLYKVIRNVAHS-QYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-THI--TDISHRFLHTSLVTTN 243 (430)
Q Consensus 169 Tvvi~ty-r~~~L~~~l~~l~~~-~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~~--nsLnnRF~p~~~i~T~ 243 (430)
||||-|| +.+.|.+.|.++.+. ..-.+|+||-|+........+.++...-+.+.+- .+. ..-.++-.-.....++
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a~~~ 80 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHAKGE 80 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH--SS
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEecccccccccccccccccccccccccccccccccccccccccccccee
Confidence 6899999 778888888887655 6788999999983211111122211101122222 222 2333444455678899
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcc
Q psy16950 244 AVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARS 280 (430)
Q Consensus 244 AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~ 280 (430)
.|+.+|||..+..+-|+-..+.-.+++..+|+.....
T Consensus 81 ~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 117 (169)
T PF00535_consen 81 YILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIY 117 (169)
T ss_dssp EEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred EEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEE
Confidence 9999999999999999999999999877666654443
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=95.69 E-value=0.044 Score=56.10 Aligned_cols=92 Identities=20% Similarity=0.170 Sum_probs=65.7
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
++.+.|+.|..++.|.-....+.-++|||++|| |||.++.- +..+++.=..-.+.++..+..++.+.+..+ .+++
T Consensus 293 ~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 369 (396)
T cd03818 293 QYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLDDPAR 369 (396)
T ss_pred HHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 566788889988887543333457999999999 88877742 556666545567777777776665555443 4567
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16950 90 VLAARQQTQVLWERYFS 106 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~ 106 (430)
..+|.++++...+++|+
T Consensus 370 ~~~l~~~ar~~~~~~fs 386 (396)
T cd03818 370 RARLRRAARRTALRYDL 386 (396)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 88999999887777775
No 24
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.52 E-value=0.073 Score=53.60 Aligned_cols=105 Identities=17% Similarity=0.139 Sum_probs=68.6
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEeccccc------ccHHHHHhcC
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLL------LQVPDTVRSI 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l------~~l~~~L~~i 85 (430)
+..+.++.|..+++|.-......-++||+++|| |||.++.- ...+++.=....+.++..+. ..+.+.|..+
T Consensus 273 ~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l 349 (388)
T TIGR02149 273 ELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATG--GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINIL 349 (388)
T ss_pred HHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCC--CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHH
Confidence 466788999999998644333467899999999 88888742 23344432334566665555 5555555443
Q ss_pred --CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 86 --SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 86 --~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
.+++..+|.++++...++.|+ .+.+....+++++
T Consensus 350 ~~~~~~~~~~~~~a~~~~~~~~s-~~~~~~~~~~~y~ 385 (388)
T TIGR02149 350 LADPELAKKMGIAGRKRAEEEFS-WGSIAKKTVEMYR 385 (388)
T ss_pred HhCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH
Confidence 567778888888776665553 4556666666654
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.39 E-value=0.048 Score=54.63 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=64.4
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+..+.++.|..+++|.-......-++|||++| +|||.++.- ...+.|.=....+.++..+..++.+.+..+ .+++
T Consensus 295 ~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~ 371 (398)
T cd03800 295 DLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPAL 371 (398)
T ss_pred HHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 45667889999999965444456799999999 599988742 344445333456777766666665555443 4677
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16950 90 VLAARQQTQVLWERYFS 106 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~ 106 (430)
..+|+++++...++.|+
T Consensus 372 ~~~~~~~a~~~~~~~~s 388 (398)
T cd03800 372 RRRLSRAGLRRARARYT 388 (398)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 88899988877766653
No 26
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=95.38 E-value=0.059 Score=52.20 Aligned_cols=89 Identities=18% Similarity=0.310 Sum_probs=57.9
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+..+.++++.++++|.-.......++|||++|| |||.++.. ...+.+.= ...+.++.+. .++.+.+..+ .+++
T Consensus 274 ~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~~~~~~-~~~~~~~~~~-~~~~~~i~~l~~~~~~ 348 (375)
T cd03821 274 DKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKV--PWQELIEY-GCGWVVDDDV-DALAAALRRALELPQR 348 (375)
T ss_pred HHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCC--CHHHHhhc-CceEEeCCCh-HHHHHHHHHHHhCHHH
Confidence 567789999999999764444578999999996 88877742 23333321 3444444432 4454444443 3467
Q ss_pred HHHHHHHHHHHHHHHh
Q psy16950 90 VLAARQQTQVLWERYF 105 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf 105 (430)
..+|.++++...++.|
T Consensus 349 ~~~~~~~~~~~~~~~~ 364 (375)
T cd03821 349 LKAMGENGRALVEERF 364 (375)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8888888887766655
No 27
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=95.35 E-value=0.078 Score=55.91 Aligned_cols=91 Identities=11% Similarity=0.156 Sum_probs=66.0
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCC---CceEEEecccccccHHHHHhcC--
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDW---SKAAVWADERLLLQVPDTVRSI-- 85 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW---~~~sv~i~~~~l~~l~~~L~~i-- 85 (430)
.+..+.|+.+..++.|........-++|||++| +|||.++.- ...++++= ....+.++..+..++.+.|..+
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g--g~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG--GIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLA 399 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC--CcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 357789999999999987655567899999999 899988742 23444432 5667778877777766666554
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy16950 86 SATQVLAARQQTQVLWERY 104 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~y 104 (430)
.++...+|.++++...++|
T Consensus 400 ~~~~~~~~~~~a~~~~~~f 418 (465)
T PLN02871 400 DPELRERMGAAAREEVEKW 418 (465)
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 4677788888887665543
No 28
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=95.30 E-value=0.093 Score=53.50 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=68.8
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+..+.|+.+..++.|.-......-++|||++|| |||.++.-- ..+.|.=....+.++..+..++.+.+..+ .++.
T Consensus 295 ~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~ 371 (405)
T TIGR03449 295 ELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG--LPVAVADGETGLLVDGHDPADWADALARLLDDPRT 371 (405)
T ss_pred HHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC--cHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHH
Confidence 566789999998888533333467999999996 888877422 23444323446667776776665555433 4566
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHh
Q psy16950 90 VLAARQQTQVLWERYFSSIEKIVFTTFEIIRD 121 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~ 121 (430)
..+|+++++...++ | +.++++..++++..+
T Consensus 372 ~~~~~~~~~~~~~~-f-sw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 372 RIRMGAAAVEHAAG-F-SWAATADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHH
Confidence 78888888766555 3 455666666666553
No 29
>PRK10307 putative glycosyl transferase; Provisional
Probab=95.16 E-value=0.06 Score=55.35 Aligned_cols=106 Identities=14% Similarity=0.137 Sum_probs=73.8
Q ss_pred cHHhhhccCcEEEecCCCCC----CcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--
Q psy16950 12 DFQVLLHNSTFCLVPRGRRL----GSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI-- 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~----~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i-- 85 (430)
+..+.++.|..+++|.-.+. ....++|+|++| +|||.++.--....++++ ...+.++..+..++.+.|..+
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALAR 372 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHh
Confidence 56678999999998843221 123589999999 688888642223345665 457777877888877777665
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHh
Q psy16950 86 SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRD 121 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~ 121 (430)
.++...+|+++++...+..|+ .+.++...++++++
T Consensus 373 ~~~~~~~~~~~a~~~~~~~fs-~~~~~~~~~~~~~~ 407 (412)
T PRK10307 373 QALLRPKLGTVAREYAERTLD-KENVLRQFIADIRG 407 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 467788999999887777774 45666777766653
No 30
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.10 E-value=0.1 Score=51.85 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=62.3
Q ss_pred cHHhhhccCcEEEecCC-------CCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc
Q psy16950 12 DFQVLLHNSTFCLVPRG-------RRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS 84 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G-------~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~ 84 (430)
+..+.++.|..+++|.- .+. ...++|||++|| |||.++.-. ..+.+.=....+.++..+..++.+.+..
T Consensus 257 ~l~~~~~~ad~~v~ps~~~~~~~~E~~-~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~ 332 (367)
T cd05844 257 EVRELMRRARIFLQPSVTAPSGDAEGL-PVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALGR 332 (367)
T ss_pred HHHHHHHhCCEEEECcccCCCCCccCC-chHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHHH
Confidence 45677889999888753 122 467999999996 999888533 3344433456777877777777666654
Q ss_pred C--CHHHHHHHHHHHHHHHHHHhh
Q psy16950 85 I--SATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 85 i--~~~~i~~mr~~~~~l~~~yf~ 106 (430)
+ .++...+|.++++...+..|+
T Consensus 333 l~~~~~~~~~~~~~a~~~~~~~~s 356 (367)
T cd05844 333 LLADPDLRARMGAAGRRRVEERFD 356 (367)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHCC
Confidence 3 456678888888766655553
No 31
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=94.98 E-value=0.075 Score=49.74 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=66.3
Q ss_pred ceEEEEEec-cchHHHHHHHHHhccc---ccceEEEEcCCCCCCCCcccccccCCCCCcccc-CCCccc-ccccccCCCC
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQ---YVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-THITDI-SHRFLHTSLV 240 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~---~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~~nsL-nnRF~p~~~i 240 (430)
+++|||-+| +.+.|.+.|+++.+.. .--+|+||=|+........+..+....+.+.+. .+.+.. .++-.-....
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~~~a~N~g~~~a 80 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQSAGLNIGIRNS 80 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCchHHHHHHHHHh
Confidence 479999999 7777888888875543 345888884442211111122222222333333 222221 1111222345
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecC
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYP 277 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~ 277 (430)
++|.|+.+|||..+..+.|+...+..++.+..+||..
T Consensus 81 ~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~ 117 (249)
T cd02525 81 RGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGP 117 (249)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecc
Confidence 8999999999999999999988887766665666643
No 32
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.85 E-value=0.12 Score=41.74 Aligned_cols=71 Identities=6% Similarity=0.043 Sum_probs=46.8
Q ss_pred CcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEec-ccccccHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy16950 32 GSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWAD-ERLLLQVPDTVRSISATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 32 ~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~-~~~l~~l~~~L~~i~~~~i~~mr~~~~~l~~~yf~ 106 (430)
.+.|++|++++|+..|.-.. -.+.+.+++.+-.+.+. .+++.+....|.+ .+++..+|.++++...+..++
T Consensus 11 ~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~~~~t 82 (92)
T PF13524_consen 11 PNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERVLKRHT 82 (92)
T ss_pred CchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhCC
Confidence 36899999999996655433 22333455555566664 4455554444444 788999999999887776664
No 33
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=94.81 E-value=0.17 Score=51.86 Aligned_cols=101 Identities=11% Similarity=0.114 Sum_probs=63.4
Q ss_pred cHHhhhccCcEEEecC--CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CH
Q psy16950 12 DFQVLLHNSTFCLVPR--GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SA 87 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~--G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~ 87 (430)
+..+.++.+..+++|. |.|. ..-++|||++|| |||.++.- .+.+..=....+.++ .+..++.+.+..+ .+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 4567789999999985 4444 357999999998 99988742 111111122345555 5555555555443 45
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 88 TQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 88 ~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+...+|.++++..-+..| +.+.++....+++
T Consensus 364 ~~~~~~~~~ar~~v~~~f-sw~~~~~~~~~~l 394 (397)
T TIGR03087 364 AEREELGQAARRRVLQHY-HWPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHh
Confidence 667889888887666555 3445555555554
No 34
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=94.64 E-value=0.19 Score=51.68 Aligned_cols=105 Identities=13% Similarity=0.097 Sum_probs=66.0
Q ss_pred cHHhhhccCcEEEecCCC-CCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEE-EecccccccHHHHHhc-CCHH
Q psy16950 12 DFQVLLHNSTFCLVPRGR-RLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAV-WADERLLLQVPDTVRS-ISAT 88 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv-~i~~~~l~~l~~~L~~-i~~~ 88 (430)
+..+.++.|..+++|... .....-++|||++| +|||.++.- ...|++.=....+ .++..+..++.+.|.. +++.
T Consensus 269 ~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~g--g~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 269 KMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKG--GITEFVLEGITGYHLAEPMTSDSIISDINRTLADP 345 (380)
T ss_pred HHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCC--CcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCH
Confidence 456778999999999753 22246799999999 799988752 2334442122233 4455556665555533 3444
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
+..+|.++++....+-| +.+.++..+++.+.
T Consensus 346 ~~~~~~~~ar~~~~~~f-sw~~~a~~~~~~l~ 376 (380)
T PRK15484 346 ELTQIAEQAKDFVFSKY-SWEGVTQRFEEQIH 376 (380)
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHH
Confidence 56788888876555555 45566677776664
No 35
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=94.48 E-value=0.25 Score=45.36 Aligned_cols=149 Identities=11% Similarity=0.093 Sum_probs=85.5
Q ss_pred ceEEEEEec-cchHHHHHHHHHhcc--cccceEEEEcCCCCCCCCcccccccCCCCCccc---cCCCc-cc----ccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHS--QYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHI---LTHIT-DI----SHRFL 235 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~--~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~V---p~~~n-sL----nnRF~ 235 (430)
..||||-+| ....|.+.|+++.+. +. -||+||=++........+.++...+|...+ ....| .. +|.-.
T Consensus 2 ~vsviip~~n~~~~l~~~L~sl~~q~~~~-~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~ 80 (196)
T cd02520 2 GVSILKPLCGVDPNLYENLESFFQQDYPK-YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIK 80 (196)
T ss_pred CeEEEEecCCCCccHHHHHHHHHhccCCC-eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHHH
Confidence 379999999 556688888887543 33 578777666322211112222223444322 12222 11 12112
Q ss_pred cCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCC-CeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhh
Q psy16950 236 HTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPE-RIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYY 314 (430)
Q Consensus 236 p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~-rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Y 314 (430)
-....++|.|+.+|+|..++++-|+...+.- ..|+ -+||-. ++...++++.|+.
T Consensus 81 g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~------------------------~~~g~~~~~r~~~ 135 (196)
T cd02520 81 GYEEARYDILVISDSDISVPPDYLRRMVAPL-MDPGVGLVTCL------------------------CAFGKSMALRREV 135 (196)
T ss_pred HHHhCCCCEEEEECCCceEChhHHHHHHHHh-hCCCCCeEEee------------------------cccCceeeeEHHH
Confidence 2344679999999999999999998777653 3432 233311 3445678888887
Q ss_pred hhhhcccchHHHHHHhhccCCchhHHHHHHHHhh
Q psy16950 315 NYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSHV 348 (430)
Q Consensus 315 l~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~~ 348 (430)
++..--+ .... ..-|||..+...+...
T Consensus 136 ~~~~ggf--~~~~-----~~~~eD~~l~~rl~~~ 162 (196)
T cd02520 136 LDAIGGF--EAFA-----DYLAEDYFLGKLIWRL 162 (196)
T ss_pred HHhccCh--HHHh-----HHHHHHHHHHHHHHHc
Confidence 7654322 1111 1238999988777543
No 36
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=94.32 E-value=0.2 Score=49.17 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=61.7
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC---CH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI---SA 87 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i---~~ 87 (430)
.+..+.|+.|...+.|.........++|||++|| |||.+|.- ...+.+. .....++..+..++.+.+..+ ++
T Consensus 254 ~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~--~~g~~~~~~~~~~~~~~i~~ll~~~~ 328 (360)
T cd04951 254 DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAG--GVREVVG--DSGLIVPISDPEALANKIDEILKMSG 328 (360)
T ss_pred ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCC--ChhhEec--CCceEeCCCCHHHHHHHHHHHHhCCH
Confidence 3567889999999998765444578999999999 88887742 2233332 134445556666655555443 45
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 88 TQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 88 ~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+...+|.+. +....+.| +.+.+..-.+++.
T Consensus 329 ~~~~~~~~~-~~~~~~~~-s~~~~~~~~~~~y 358 (360)
T cd04951 329 EERDIIGAR-RERIVKKF-SINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHH-HHHHHHhc-CHHHHHHHHHHHh
Confidence 555555544 44444444 3455555555544
No 37
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.31 E-value=0.2 Score=49.31 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=60.6
Q ss_pred cHHhhhccCcEEEecCCC-CCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 12 DFQVLLHNSTFCLVPRGR-RLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
+..+.+..+..++.|.-. .....-++|||++|| |||.++.- +..+++.= -...++..+. +.+.+..+ .++
T Consensus 260 ~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~ 332 (363)
T cd04955 260 ELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGD--KAIYFKVGDD--LASLLEELEADPE 332 (363)
T ss_pred HHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecC--CeeEecCchH--HHHHHHHHHhCHH
Confidence 355678888888888644 323457999999999 77777632 33454442 2333344331 33333332 346
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
...+|.++++...+..| +.+.++...++++
T Consensus 333 ~~~~~~~~~~~~~~~~f-s~~~~~~~~~~~y 362 (363)
T cd04955 333 EVSAMAKAARERIREKY-TWEKIADQYEELY 362 (363)
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHh
Confidence 77888888887766666 3555666665554
No 38
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=94.25 E-value=0.31 Score=47.93 Aligned_cols=105 Identities=10% Similarity=0.077 Sum_probs=69.5
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+..+.|+.|.+++.|........-++|||++||- ||.++. -+..+.+.=....+.++..+..++.+.|..+ .+++
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~ 333 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDE 333 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 4567899999999997655556789999999985 666653 2344444323456666666665555544432 4566
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 90 VLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
..+|+++++..-+..| +.+.+....+++.+
T Consensus 334 ~~~~~~~~~~~~~~~~-s~~~~~~~~~~~y~ 363 (365)
T cd03825 334 REELGEAARELAENEF-DSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHh
Confidence 8888888877665555 45566666666653
No 39
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=94.03 E-value=0.35 Score=48.89 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=63.7
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccc-c-ccHHHHHhcCCHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERL-L-LQVPDTVRSISATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~-l-~~l~~~L~~i~~~~ 89 (430)
+..++++.+..++.|........-++|||++| +|||.++.-.++ +.|.-....+.++..+ + ..|...|. .++.
T Consensus 266 ~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a~~i~~ll~--~~~~ 340 (372)
T cd03792 266 EVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAAVRILYLLR--DPEL 340 (372)
T ss_pred HHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHHHHHHHHHc--CHHH
Confidence 34567888999888864333347899999999 699998743333 3333233334443221 1 22333332 4677
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 90 VLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 90 i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
..+|+++++.....-| +.+.++...+++++
T Consensus 341 ~~~~~~~a~~~~~~~~-s~~~~~~~~~~~~~ 370 (372)
T cd03792 341 RRKMGANAREHVRENF-LITRHLKDYLYLIS 370 (372)
T ss_pred HHHHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence 7899998888766555 45566676666665
No 40
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=94.02 E-value=0.12 Score=50.52 Aligned_cols=85 Identities=18% Similarity=0.171 Sum_probs=57.8
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc-C-CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS-I-SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~-i-~~~ 88 (430)
.+..+.++.+.+++.|.-....+.-++||+++|| |||.++.- ...+.+ ....+.++..+..++.+.|.. + .++
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~ 338 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALAAAIERLLEDPA 338 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHHHHHHHHhcCHH
Confidence 3567889999999998543333567999999997 77777642 234444 345666777777777776665 3 466
Q ss_pred HHHHHHHHHHHH
Q psy16950 89 QVLAARQQTQVL 100 (430)
Q Consensus 89 ~i~~mr~~~~~l 100 (430)
...+|.++++..
T Consensus 339 ~~~~~~~~~~~~ 350 (365)
T cd03809 339 LREELRERGLAR 350 (365)
T ss_pred HHHHHHHHHHHH
Confidence 677777777643
No 41
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=93.54 E-value=0.11 Score=46.56 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=65.2
Q ss_pred EEEEec-cchHHHHHHHHHhccc---ccceEEEEcCCCCCCCCcccccccCCCCCcc-ccCCCc--ccccccccCCCCCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQ---YVSRIIVLWSSPDKPVPAFLSRHNATLPPIH-ILTHIT--DISHRFLHTSLVTT 242 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~---~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~-Vp~~~n--sLnnRF~p~~~i~T 242 (430)
|+|.+| ..+.|.+.|+++.+.. ...+|+||=|+........+.++...++.+. +..+.| .-.++-.-.....+
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~g 80 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAARG 80 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHhcC
Confidence 477888 5677888888876664 4789999977733221111222223344322 222221 12222223345667
Q ss_pred ceEEEecCCCCCChHHHHHHHHHHH-hCCCCeeec
Q psy16950 243 NAVLSLDEDATLNTDEIDFAFHVWK-SFPERIVGY 276 (430)
Q Consensus 243 ~AVl~~DDDv~~~~~~l~faF~~Wr-~~p~rlVGf 276 (430)
|.|+.+|+|..+.++.|+.....+. ..++-++|-
T Consensus 81 d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~ 115 (185)
T cd04179 81 DIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGS 115 (185)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEE
Confidence 9999999999999999999988844 445556664
No 42
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.50 E-value=0.17 Score=50.97 Aligned_cols=87 Identities=18% Similarity=0.235 Sum_probs=61.0
Q ss_pred cHHhhhccCcEEEecCCCC----------CC-cchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRR----------LG-SFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPD 80 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~----------~~-s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~ 80 (430)
+..+.++. .|+|++.+++ .. -..++++|++| +|||+++.-.++ +.+.=....+.++ ++.++.+
T Consensus 219 el~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~--~~V~~~~~G~~v~--~~~el~~ 292 (333)
T PRK09814 219 ELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIA--DFIVENGLGFVVD--SLEELPE 292 (333)
T ss_pred HHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHH--HHHHhCCceEEeC--CHHHHHH
Confidence 34455555 8999987761 11 13488888888 599998753332 4443355666666 5667999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHH
Q psy16950 81 TVRSISATQVLAARQQTQVLWERY 104 (430)
Q Consensus 81 ~L~~i~~~~i~~mr~~~~~l~~~y 104 (430)
.|+.+++++..+|+++++.+-+.+
T Consensus 293 ~l~~~~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 293 IIDNITEEEYQEMVENVKKISKLL 316 (333)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876664
No 43
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=93.38 E-value=0.27 Score=51.48 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=63.9
Q ss_pred HhhhccC----cEEEecC-CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--C
Q psy16950 14 QVLLHNS----TFCLVPR-GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--S 86 (430)
Q Consensus 14 ~~~l~~S----~FCL~p~-G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~ 86 (430)
.+.++.+ ..++.|. ..++ ..-++|||++|| |||.++.- ...++++=..-.+.++..+...+.+.+..+ .
T Consensus 331 ~~~~~~a~~~~Dv~v~pS~~E~f-g~~~lEAma~G~-PvV~s~~g--g~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 331 PELYRLAARSRGIFVNPALTEPF-GLTLLEAAACGL-PIVATDDG--GPRDIIANCRNGLLVDVLDLEAIASALEDALSD 406 (439)
T ss_pred HHHHHHHhhcCCEEecccccCCc-ccHHHHHHHhCC-CEEEeCCC--CcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC
Confidence 3445544 3444453 3333 467999999999 99999842 234555434456778877777766655443 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 87 ATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 87 ~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+++..+|.++++...+..| +.+.++...+++|
T Consensus 407 ~~~~~~~~~~a~~~~~~~f-sw~~~~~~~~~l~ 438 (439)
T TIGR02472 407 SSQWQLWSRNGIEGVRRHY-SWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHh
Confidence 5667778888876555555 4566666666655
No 44
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=93.22 E-value=0.2 Score=49.46 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=68.0
Q ss_pred EEEEEec-cc-hHHHHHHHHHhcc-c-c-cceEEEEcCCCCCCCCccccc--ccCCCCCcccc-CCCc--ccccccccCC
Q psy16950 169 TAIIYAQ-LG-TSLYKVIRNVAHS-Q-Y-VSRIIVLWSSPDKPVPAFLSR--HNATLPPIHIL-THIT--DISHRFLHTS 238 (430)
Q Consensus 169 Tvvi~ty-r~-~~L~~~l~~l~~~-~-~-l~~IvVvWn~~~~~~P~~l~~--~~~~~p~~~Vp-~~~n--sLnnRF~p~~ 238 (430)
+|||.+| .. +.|.+.|.++.+. + . ..|||||=|+...+....+.+ .....+.+.+- .+.| --..|-.-..
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 5899999 66 7888888887543 2 2 359999988733222111111 01123344432 2222 1112222223
Q ss_pred CCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeee
Q psy16950 239 LVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVG 275 (430)
Q Consensus 239 ~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVG 275 (430)
.-+.|-|+.+|+|+.++.+-|+...+.-.++|..+||
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~ 117 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVC 117 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEE
Confidence 4678999999999999999999999988899998887
No 45
>PRK11204 N-glycosyltransferase; Provisional
Probab=93.18 E-value=0.25 Score=51.15 Aligned_cols=114 Identities=14% Similarity=0.215 Sum_probs=69.9
Q ss_pred CceEEEEEec-cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcccccccCCCCCcccc-CCCc--ccccccccCCCC
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-THIT--DISHRFLHTSLV 240 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~~n--sLnnRF~p~~~i 240 (430)
...|++|-+| ..+.+.+.|+++.+..+- -||+||-++........+.++....|.+.+- .+.| .-.++-.-....
T Consensus 54 p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g~~~a 133 (420)
T PRK11204 54 PGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALNTGAAAA 133 (420)
T ss_pred CCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHHHHHc
Confidence 4689999999 566677888887654433 5888887773322111122222334543322 1211 111111122346
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHHhCCCC-eeecCCc
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWKSFPER-IVGYPAR 279 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf~~R 279 (430)
++|-|+.+|+|..+.++-|+...+...++|+- +|+-.++
T Consensus 134 ~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~ 173 (420)
T PRK11204 134 RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPR 173 (420)
T ss_pred CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCce
Confidence 78999999999999999999998888877753 5554444
No 46
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=93.08 E-value=0.35 Score=47.10 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=42.9
Q ss_pred cHHhhhccCcEEEecCC--CCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC
Q psy16950 12 DFQVLLHNSTFCLVPRG--RRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G--~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i 85 (430)
+..+.++.+.+++.|.- .+. ...++|||++|+ |||.+|.-. ..++++=..-.+.++. ..++.+.|+.+
T Consensus 236 ~~~~~~~~~d~~v~ps~~~E~~-~~~~lEAma~G~-PvI~~~~~~--~~e~i~~~~~g~l~~~--~~~l~~~l~~l 305 (335)
T cd03802 236 EKAELLGNARALLFPILWEEPF-GLVMIEAMACGT-PVIAFRRGA--VPEVVEDGVTGFLVDS--VEELAAAVARA 305 (335)
T ss_pred HHHHHHHhCcEEEeCCcccCCc-chHHHHHHhcCC-CEEEeCCCC--chhheeCCCcEEEeCC--HHHHHHHHHHH
Confidence 34577899999999964 343 467999999997 999988532 3344432223334443 44455555443
No 47
>PHA01630 putative group 1 glycosyl transferase
Probab=93.04 E-value=0.73 Score=46.87 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=58.2
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCc--------------------eEEEe
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSK--------------------AAVWA 70 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~--------------------~sv~i 70 (430)
.+..+.++.+..++.|.-......-++|||++|| |||.++.- ...|.+.=.. +.+.+
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~g--g~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEKG--AWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCCC--CchhhccCCCceEEeeecccccccccCCccccccc
Confidence 3456778999999998543333467999999998 56666531 2223222111 22233
Q ss_pred ccccc---ccHHHHHhcCCHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 71 DERLL---LQVPDTVRSISATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 71 ~~~~l---~~l~~~L~~i~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
+.++- .++...|...++++..+|..+.+....+-| +.++++...+++++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~f-s~~~ia~k~~~l~~ 329 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENY-SYNAIAKMWEKILE 329 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHh
Confidence 33222 224444444333555555555444444445 45666777777664
No 48
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=93.03 E-value=0.32 Score=48.96 Aligned_cols=90 Identities=14% Similarity=0.058 Sum_probs=56.6
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHHH
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQV 90 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~i 90 (430)
..+.++.|.++++|........-++|||++| +|||.++.-. ..+.+.-....+.++. +..++.+.+..+ .++..
T Consensus 293 ~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~ 368 (392)
T cd03805 293 KELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG--PLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLA 368 (392)
T ss_pred HHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC--cHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHH
Confidence 4577899999998865443346789999999 6777776421 2233332233444554 444554444432 34568
Q ss_pred HHHHHHHHHHHHHHhh
Q psy16950 91 LAARQQTQVLWERYFS 106 (430)
Q Consensus 91 ~~mr~~~~~l~~~yf~ 106 (430)
.+|+++++...+..|+
T Consensus 369 ~~~~~~a~~~~~~~~s 384 (392)
T cd03805 369 DRMGAAGRKRVKEKFS 384 (392)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 8898888876666664
No 49
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=92.98 E-value=0.22 Score=42.66 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=65.4
Q ss_pred EEEEec-cchHHHHHHHHHhccc-ccceEEEEcCCCCCCCCcccccccCCCCC-cc-cc--CCCcccccccccCCCCCCc
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQ-YVSRIIVLWSSPDKPVPAFLSRHNATLPP-IH-IL--THITDISHRFLHTSLVTTN 243 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~-~l~~IvVvWn~~~~~~P~~l~~~~~~~p~-~~-Vp--~~~nsLnnRF~p~~~i~T~ 243 (430)
|+|.+| +.+.|.+.|+++.+-. .--+|+||-|+........+.+.....+. .. +. .....-.+|-.-.....++
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~~~~ 80 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRHAKGD 80 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHhcCCC
Confidence 578888 6677888888875533 45789999888432222112221111111 11 11 1111222333334456899
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCccee
Q psy16950 244 AVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHF 282 (430)
Q Consensus 244 AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~ 282 (430)
.|+.+|+|..+..+.|+-....+.+.++ +.+..++...
T Consensus 81 ~i~~~D~D~~~~~~~l~~~~~~~~~~~~-~~~v~~~~~~ 118 (180)
T cd06423 81 IVVVLDADTILEPDALKRLVVPFFADPK-VGAVQGRVRV 118 (180)
T ss_pred EEEEECCCCCcChHHHHHHHHHhccCCC-eeeEeeeEEE
Confidence 9999999999999888877677777654 4444444443
No 50
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.94 E-value=0.36 Score=51.18 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=68.4
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCC------CceEEEecccccccHHHHHhc
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDW------SKAAVWADERLLLQVPDTVRS 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW------~~~sv~i~~~~l~~l~~~L~~ 84 (430)
.+..+.|..+..++.|.-......-++|||++|| |||.++.- ...+.++= ....+.++..+..++.+.+..
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g--~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVG--SCRELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCC--ChHHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 4567788899999888533222467999999999 88887632 22233321 235677777777776666554
Q ss_pred C--CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHH
Q psy16950 85 I--SATQVLAARQQTQVLWERYFSSIEKIVFTTFE 117 (430)
Q Consensus 85 i--~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~ 117 (430)
+ .++...+|.++++...+++|+ .+.++....+
T Consensus 439 ll~~~~~~~~~~~~a~~~v~~~~s-~~~~~~~y~~ 472 (475)
T cd03813 439 LLKDPELRRAMGEAGRKRVERYYT-LERMIDSYRR 472 (475)
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHH
Confidence 3 577788999999887788874 3444444433
No 51
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=92.92 E-value=0.46 Score=41.11 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=80.2
Q ss_pred EEEEec-cchHHHHHHHHHhcccc-cceEEEEcCCCCCCCCcccccccCCCCCcccc-C--CCcccccccccCCCCCCce
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-T--HITDISHRFLHTSLVTTNA 244 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~--~~nsLnnRF~p~~~i~T~A 244 (430)
++|.+| +.+.|.++|+++.+... -.+|+|+=++ ... +.. ..+....+.+.+- . ..+.-..|-.-.....++-
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~-s~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~~~~~~ 77 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNA-STD-GSV-ELLRELFPEVRLIRNGENLGFGAGNNQGIREAKGDY 77 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECC-CCc-hHH-HHHHHhCCCeEEEecCCCcChHHHhhHHHhhCCCCE
Confidence 477888 77778888888866543 3456665444 222 211 1111112222222 1 1122223333345568999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhhhhcccchH
Q psy16950 245 VLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNYLYSHWLSP 324 (430)
Q Consensus 245 Vl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~~Y~~~~p~ 324 (430)
|+.+|||..++.+.++...+.-.++|+-.+- .++ +.++++++.++.+...-.
T Consensus 78 i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~-~~~-----------------------~~~~~~~~~~~~~~~~~~---- 129 (166)
T cd04186 78 VLLLNPDTVVEPGALLELLDAAEQDPDVGIV-GPK-----------------------VSGAFLLVRREVFEEVGG---- 129 (166)
T ss_pred EEEECCCcEECccHHHHHHHHHHhCCCceEE-Ecc-----------------------CceeeEeeeHHHHHHcCC----
Confidence 9999999999999888777766667665332 122 444666777765533211
Q ss_pred HHHHHhhcc--CCchhHHHHHHHHh
Q psy16950 325 LLLKTVAQS--HNCEDILMNFLVSH 347 (430)
Q Consensus 325 ~ir~~VD~~--~NCEDIaMNflVs~ 347 (430)
.|+. .-+||..|..-+..
T Consensus 130 -----~~~~~~~~~eD~~~~~~~~~ 149 (166)
T cd04186 130 -----FDEDFFLYYEDVDLCLRARL 149 (166)
T ss_pred -----CChhhhccccHHHHHHHHHH
Confidence 1332 26789887776553
No 52
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=92.89 E-value=0.66 Score=44.96 Aligned_cols=91 Identities=8% Similarity=0.099 Sum_probs=58.5
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
.+..+.++.|.+.++|.........++|||++|+ |||.++.- .+.+.+.=....+.++..+. ++.+.+..+ .++
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~ 345 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE 345 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH
Confidence 3567789999999999765555678999999986 55555532 23444433344555555442 444444333 345
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy16950 89 QVLAARQQTQVLWERYF 105 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf 105 (430)
...+|+++++...++++
T Consensus 346 ~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 346 LRRRLSKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56788888887777765
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=92.82 E-value=1.8 Score=43.92 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=66.3
Q ss_pred CceEEEEEec-cchHHHHHHHHHhcccc-cceEEEEcCCCCCCCCcccccccCCCCCccccCCCc-cc-ccccccCCCCC
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPAFLSRHNATLPPIHILTHIT-DI-SHRFLHTSLVT 241 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp~~~n-sL-nnRF~p~~~i~ 241 (430)
...+|||-+| ....|.+.|+++.+-.. --||+||=++........+.++....|.+.|-...| .+ ..|-.-....+
T Consensus 6 p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~n~G~~~arN~gl~~a~ 85 (328)
T PRK10073 6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGVSVARNTGLAVAT 85 (328)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHHHhCC
Confidence 3689999999 56677788888754433 347888855521111111222222234444332222 12 12223345678
Q ss_pred CceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCC
Q psy16950 242 TNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPA 278 (430)
Q Consensus 242 T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~ 278 (430)
++-|+.+|+|-.+.++.++...+.-.+..--+|...+
T Consensus 86 g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~ 122 (328)
T PRK10073 86 GKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNA 122 (328)
T ss_pred CCEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEcc
Confidence 9999999999999999998887776555444544333
No 54
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=92.67 E-value=0.97 Score=41.19 Aligned_cols=150 Identities=11% Similarity=-0.088 Sum_probs=81.0
Q ss_pred EEEEec-cchHHHHHHHHHhcccc-cceEEEEcCCCCCCCCcc-cccccCCCCCcc-ccCCCc-----ccccccccCCCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPAF-LSRHNATLPPIH-ILTHIT-----DISHRFLHTSLV 240 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~~-l~~~~~~~p~~~-Vp~~~n-----sLnnRF~p~~~i 240 (430)
|||.|| +.+.|.+.|+++.+... -.+|+|+=|+ ....... +.++....+ +. +..+.| .+|.=+.--...
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~-s~d~t~~~~~~~~~~~~-i~~~~~~~n~g~~~~~n~~~~~a~~~ 78 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNA-STDGTAEWLTSLGDLDN-IVYLRLPENLGGAGGFYEGVRRAYEL 78 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEEEECC-CCcchHHHHHHhcCCCc-eEEEECccccchhhHHHHHHHHHhcc
Confidence 578899 67778888888865433 3466666444 2221111 122211111 11 112222 222212111145
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecCCCCCccccccccceEeehhhhhhhcc
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTSKWTNDYSIVLTGAAFYHRYYNYLYSH 320 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~~~~~~ySmVLt~aaF~Hr~Yl~~Y~~ 320 (430)
..|.|+.+|||..++++-++...+.+. .|. .....|+....+ + -..+.+++|..+....-
T Consensus 79 ~~d~v~~ld~D~~~~~~~l~~l~~~~~-~~~-~~~~~~~~~~~~---~---------------~~~~~~~~~~~~~~~g~ 138 (202)
T cd04185 79 GYDWIWLMDDDAIPDPDALEKLLAYAD-KDN-PQFLAPLVLDPD---G---------------SFVGVLISRRVVEKIGL 138 (202)
T ss_pred CCCEEEEeCCCCCcChHHHHHHHHHHh-cCC-ceEecceeEcCC---C---------------ceEEEEEeHHHHHHhCC
Confidence 789999999999999999998888887 333 222223332211 1 22456788877654321
Q ss_pred cchHHHHHHhhccCCchhHHHHHHHHhh
Q psy16950 321 WLSPLLLKTVAQSHNCEDILMNFLVSHV 348 (430)
Q Consensus 321 ~~p~~ir~~VD~~~NCEDIaMNflVs~~ 348 (430)
.. .. -..=+||.-+...+...
T Consensus 139 ~~-~~------~~~~~eD~~~~~r~~~~ 159 (202)
T cd04185 139 PD-KE------FFIWGDDTEYTLRASKA 159 (202)
T ss_pred CC-hh------hhccchHHHHHHHHHHc
Confidence 11 10 02347999998888765
No 55
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=92.56 E-value=0.4 Score=45.35 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=62.6
Q ss_pred CCCceEEEEEec-cchHHHHHHHHHhccccc---ceEEEEcCCCCCCCCcc-cccccCCCCCccc-cCC--Ccccccccc
Q psy16950 164 ASEQFTAIIYAQ-LGTSLYKVIRNVAHSQYV---SRIIVLWSSPDKPVPAF-LSRHNATLPPIHI-LTH--ITDISHRFL 235 (430)
Q Consensus 164 ~~~~fTvvi~ty-r~~~L~~~l~~l~~~~~l---~~IvVvWn~~~~~~P~~-l~~~~~~~p~~~V-p~~--~nsLnnRF~ 235 (430)
....+|+||.+| +...|.+.|+++.+.... -+|+||=++ ....... +.++... .+.+ ..+ .+.-.++-.
T Consensus 27 ~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~-s~d~t~~~~~~~~~~--~v~~i~~~~~~g~~~a~n~ 103 (251)
T cd06439 27 YLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDG-STDGTAEIAREYADK--GVKLLRFPERRGKAAALNR 103 (251)
T ss_pred CCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECC-CCccHHHHHHHHhhC--cEEEEEcCCCCChHHHHHH
Confidence 345799999999 667788888887554432 478888665 3221111 2222111 1221 121 222333333
Q ss_pred cCCCCCCceEEEecCCCCCChHHHHHHHHHHHh
Q psy16950 236 HTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKS 268 (430)
Q Consensus 236 p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~ 268 (430)
-.....+|.|+.+|+|..++.+.|+-....+..
T Consensus 104 gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~ 136 (251)
T cd06439 104 ALALATGEIVVFTDANALLDPDALRLLVRHFAD 136 (251)
T ss_pred HHHHcCCCEEEEEccccCcCHHHHHHHHHHhcC
Confidence 345567899999999999999889888777753
No 56
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=92.53 E-value=0.32 Score=48.47 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=56.2
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcCCH---H
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSISA---T 88 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i~~---~ 88 (430)
+..+.++.+..+++|.-.+.+ ...+|||++|| |||.++.-. ..+.+.=....+.++..+...+.+.+..+-. +
T Consensus 254 ~~~~~~~~ad~~v~ps~e~~g-~~~~Eama~G~-Pvi~~~~~~--~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~ 329 (351)
T cd03804 254 ELRDLYARARAFLFPAEEDFG-IVPVEAMASGT-PVIAYGKGG--ALETVIDGVTGILFEEQTVESLAAAVERFEKNEDF 329 (351)
T ss_pred HHHHHHHhCCEEEECCcCCCC-chHHHHHHcCC-CEEEeCCCC--CcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCccc
Confidence 367789999999998654443 66899999998 999887422 2343322345667776666555554443321 3
Q ss_pred HHHHHHHHHH-HHHHHHh
Q psy16950 89 QVLAARQQTQ-VLWERYF 105 (430)
Q Consensus 89 ~i~~mr~~~~-~l~~~yf 105 (430)
..++|+++++ +.|++|-
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (351)
T cd03804 330 DPQAIRAHAERFSESRFR 347 (351)
T ss_pred CHHHHHHHHHhcCHHHHH
Confidence 4556666553 4465554
No 57
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=92.41 E-value=0.32 Score=45.35 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=65.5
Q ss_pred eEEEEEec-cc-hHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccc--cCCCCCcccc--CCCcccccccccCCCCC
Q psy16950 168 FTAIIYAQ-LG-TSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRH--NATLPPIHIL--THITDISHRFLHTSLVT 241 (430)
Q Consensus 168 fTvvi~ty-r~-~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~--~~~~p~~~Vp--~~~nsLnnRF~p~~~i~ 241 (430)
.||||-+| .. +.|.+.|+++.+.. -.+|+||=++.. . +.. ..+ ....+.+.+- .....-+++-.-....+
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~-~~eiivvdd~s~-d-~~~-~~l~~~~~~~~~~v~~~~~~g~~~a~n~g~~~a~ 77 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK-PLEIIVVTDGDD-E-PYL-SILSQTVKYGGIFVITVPHPGKRRALAEGIRHVT 77 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC-CCEEEEEeCCCC-h-HHH-HHHHhhccCCcEEEEecCCCChHHHHHHHHHHhC
Confidence 58999999 55 77888888876654 568988866622 2 211 111 1112222222 11111122222234568
Q ss_pred CceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcce
Q psy16950 242 TNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSH 281 (430)
Q Consensus 242 T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h 281 (430)
+|-|+.+|||..+..+.|+-...... +|+ +.+..++..
T Consensus 78 ~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~-v~~v~~~~~ 115 (235)
T cd06434 78 TDIVVLLDSDTVWPPNALPEMLKPFE-DPK-VGGVGTNQR 115 (235)
T ss_pred CCEEEEECCCceeChhHHHHHHHhcc-CCC-EeEEcCceE
Confidence 99999999999999999999988887 443 333344443
No 58
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=92.24 E-value=1.6 Score=39.71 Aligned_cols=108 Identities=9% Similarity=-0.006 Sum_probs=63.3
Q ss_pred EEEEEec-cchHHHHHHHHHhccc-ccceEEEEcCCCCCCCCcccccccCCCCC-cc-ccCCCc--ccccccccCCCCCC
Q psy16950 169 TAIIYAQ-LGTSLYKVIRNVAHSQ-YVSRIIVLWSSPDKPVPAFLSRHNATLPP-IH-ILTHIT--DISHRFLHTSLVTT 242 (430)
Q Consensus 169 Tvvi~ty-r~~~L~~~l~~l~~~~-~l~~IvVvWn~~~~~~P~~l~~~~~~~p~-~~-Vp~~~n--sLnnRF~p~~~i~T 242 (430)
+|+|-|| +...|.+.|.++.+.. .--||+||=++........+.++....|. +. +....| .-.++-.-....++
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~~~~g 80 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQAADG 80 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHHhCCC
Confidence 5899999 6667888888875432 23588888665222211112222223332 11 112221 11122222456789
Q ss_pred ceEEEecCCCCCChHHHHHHHHHHHhCCCC-eeec
Q psy16950 243 NAVLSLDEDATLNTDEIDFAFHVWKSFPER-IVGY 276 (430)
Q Consensus 243 ~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf 276 (430)
|-|+.+|+|..+.++.|+-..+...+.|.- ++|.
T Consensus 81 ~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~ 115 (214)
T cd04196 81 DYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYS 115 (214)
T ss_pred CEEEEECCCcccChhHHHHHHHHHhcCCCceEEec
Confidence 999999999999999999888876666554 4443
No 59
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=91.92 E-value=0.29 Score=45.24 Aligned_cols=106 Identities=10% Similarity=0.120 Sum_probs=61.4
Q ss_pred EEEEec-cchHHHHHHHHHhccc--ccceEEEEcCCCCCCCCcccccccCCCCCcccc--CCCccccc-ccccCCCCCCc
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQ--YVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL--THITDISH-RFLHTSLVTTN 243 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~--~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp--~~~nsLnn-RF~p~~~i~T~ 243 (430)
|||.+| +...|.++|+.+.+.. .--||+||=|+........+.++.+..+.+.+- .++....+ +-.-.....+|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a~gd 80 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAARGD 80 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHcCCC
Confidence 578889 6677888888875543 457888885552111111112222222332211 22222221 11223457789
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHhC-CCCeee
Q psy16950 244 AVLSLDEDATLNTDEIDFAFHVWKSF-PERIVG 275 (430)
Q Consensus 244 AVl~~DDDv~~~~~~l~faF~~Wr~~-p~rlVG 275 (430)
.|+.+|+|..++.+.|+...+.+... ++-++|
T Consensus 81 ~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g 113 (224)
T cd06442 81 VIVVMDADLSHPPEYIPELLEAQLEGGADLVIG 113 (224)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEE
Confidence 99999999999999999999986554 444444
No 60
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=91.80 E-value=0.5 Score=47.40 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=59.8
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQ 89 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~ 89 (430)
+-.+.++++..++.|.-......-++|||++|| |||.++.-.-| .+.+.=....+.++..+..++.+.|..+ .++.
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 348 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLNDPKL 348 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHH
Confidence 466788999999988644333478999999999 77776521111 2233223456677766666665555443 4678
Q ss_pred HHHHHHHHHHHHHHH
Q psy16950 90 VLAARQQTQVLWERY 104 (430)
Q Consensus 90 i~~mr~~~~~l~~~y 104 (430)
..+|+++++..-++|
T Consensus 349 ~~~~~~~a~~~~~~~ 363 (372)
T cd04949 349 LQKFSEAAYENAERY 363 (372)
T ss_pred HHHHHHHHHHHHHHh
Confidence 889998888765544
No 61
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=91.39 E-value=0.81 Score=43.35 Aligned_cols=98 Identities=18% Similarity=0.170 Sum_probs=60.9
Q ss_pred ceEEEEEec-cchHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcccc-CC-CcccccccccCCCCCCc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-TH-ITDISHRFLHTSLVTTN 243 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~-~nsLnnRF~p~~~i~T~ 243 (430)
+.|++|.|| ....|.+.|+++... ..+|+||=|+ ....-..+ .. .+ ...|- .. .+--..|-.-....+++
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~--~~eiivvD~g-StD~t~~i--~~-~~-~~~v~~~~~~g~~~~~n~~~~~a~~d 73 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWA--VDEIIVVDSG-STDRTVEI--AK-EY-GAKVYQRWWDGFGAQRNFALELATND 73 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhcc--cCEEEEEeCC-CCccHHHH--HH-Hc-CCEEEECCCCChHHHHHHHHHhCCCC
Confidence 368999999 666677888887644 3699999887 32211111 11 01 11221 11 11111222233457789
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHhCCC
Q psy16950 244 AVLSLDEDATLNTDEIDFAFHVWKSFPE 271 (430)
Q Consensus 244 AVl~~DDDv~~~~~~l~faF~~Wr~~p~ 271 (430)
.|+.+|.|..++.+-++...+.-.+.|.
T Consensus 74 ~vl~lDaD~~~~~~~~~~l~~~~~~~~~ 101 (229)
T cd02511 74 WVLSLDADERLTPELADEILALLATDDY 101 (229)
T ss_pred EEEEEeCCcCcCHHHHHHHHHHHhCCCC
Confidence 9999999999999999887777677776
No 62
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=91.37 E-value=0.69 Score=44.08 Aligned_cols=91 Identities=7% Similarity=-0.039 Sum_probs=56.2
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccH---HHHH-hcCC-
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQV---PDTV-RSIS- 86 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l---~~~L-~~i~- 86 (430)
+..+.++.|.++++|.........++||+++||. ||.++.- ...+++.=....+.++..+...+ .+.+ ....
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 4567899999999996544345689999999985 4555532 33444543455677777776665 2333 3332
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy16950 87 ATQVLAARQQTQVLWERYF 105 (430)
Q Consensus 87 ~~~i~~mr~~~~~l~~~yf 105 (430)
++...+|..+++..+...|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~ 351 (353)
T cd03811 333 PELRERLAAAARERVAREY 351 (353)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 4455666664555444443
No 63
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=91.37 E-value=0.62 Score=45.59 Aligned_cols=93 Identities=9% Similarity=0.099 Sum_probs=61.2
Q ss_pred ccHHhhhccCcEEEecCCC------CCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc
Q psy16950 11 YDFQVLLHNSTFCLVPRGR------RLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~------~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~ 84 (430)
.+..+.++++.++++|... ......++||+++||-.|. ++. -...+.+.=....+.+++.+..++.+.|..
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~--~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~ 323 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDV--SGIPELVEDGETGLLVPPGDPEALADAIER 323 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCC--CCcchhhhCCCceEEeCCCCHHHHHHHHHH
Confidence 3567788999999998653 2235789999999986654 443 223444442334666666666666555544
Q ss_pred C--CHHHHHHHHHHHHHHHHHHhh
Q psy16950 85 I--SATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 85 i--~~~~i~~mr~~~~~l~~~yf~ 106 (430)
+ .+++..+|.++++...+..|+
T Consensus 324 ~~~~~~~~~~~~~~a~~~~~~~~s 347 (355)
T cd03799 324 LLDDPELRREMGEAGRARVEEEFD 347 (355)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhcC
Confidence 3 466678888888877666664
No 64
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=91.33 E-value=0.38 Score=49.95 Aligned_cols=71 Identities=15% Similarity=0.281 Sum_probs=48.6
Q ss_pred cchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecc-cccccHHHHHhcC--CHHHHHHHHHHHHHHHHHHhh
Q psy16950 33 SFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADE-RLLLQVPDTVRSI--SATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 33 s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~-~~l~~l~~~L~~i--~~~~i~~mr~~~~~l~~~yf~ 106 (430)
..-++|||++|+ |||.++.-- ..++++=..-.+.++. .+..++.+.|..+ ++++..+|+++++..|+..|+
T Consensus 324 p~~llEAma~G~-PVIas~vgg--~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 324 PVSIMEAMSFGI-PVIATNVGG--TPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred cHHHHHHHHcCC-CEEeCCCCC--cHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcC
Confidence 467999999995 999887322 3344542333455544 3555555555443 578899999999999998885
No 65
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=90.74 E-value=2.8 Score=38.99 Aligned_cols=166 Identities=12% Similarity=0.056 Sum_probs=85.4
Q ss_pred EEEEec-cc-hHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcc-ccCCCc-----ccccccccCCCCC
Q psy16950 170 AIIYAQ-LG-TSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIH-ILTHIT-----DISHRFLHTSLVT 241 (430)
Q Consensus 170 vvi~ty-r~-~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~-Vp~~~n-----sLnnRF~p~~~i~ 241 (430)
+||-+| +. ..|.+.|+++.+- ..+|+||=|+.+ +......+ ...+.+. +..+.| .+|.=+.-.....
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q--~~~iivvDn~s~-~~~~~~~~--~~~~~i~~i~~~~n~G~~~a~N~g~~~a~~~~ 75 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ--VDKVVVVDNSSG-NDIELRLR--LNSEKIELIHLGENLGIAKALNIGIKAALENG 75 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc--CCEEEEEeCCCC-ccHHHHhh--ccCCcEEEEECCCceehHHhhhHHHHHHHhCC
Confidence 477888 66 7888899887654 678999966632 21111111 1012222 111211 1111111112225
Q ss_pred CceEEEecCCCCCChHHHHHHHHHHHhC---CCCeeecCCcceeccCCC--CCceecC----------CCCCcccccccc
Q psy16950 242 TNAVLSLDEDATLNTDEIDFAFHVWKSF---PERIVGYPARSHFWDDAK--NSWGYTS----------KWTNDYSIVLTG 306 (430)
Q Consensus 242 T~AVl~~DDDv~~~~~~l~faF~~Wr~~---p~rlVGf~~R~h~~~~~~--~~w~Y~~----------~~~~~ySmVLt~ 306 (430)
+|-|+.+|||..++++.|+... .|... -..+.++.|+....+... ..+.... ........+.+.
T Consensus 76 ~d~v~~lD~D~~~~~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (237)
T cd02526 76 ADYVLLFDQDSVPPPDMVEKLL-AYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITS 154 (237)
T ss_pred CCEEEEECCCCCcCHhHHHHHH-HHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeeecc
Confidence 6999999999999999999987 44432 223444444433211110 0111100 001122344556
Q ss_pred ceEeehhhhhhhcccchHHHHHHhhccCCchhHHHHHHHHhh
Q psy16950 307 AAFYHRYYNYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSHV 348 (430)
Q Consensus 307 aaF~Hr~Yl~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~~ 348 (430)
++++.|..++.-.-. .+.. ...|||+-|..-+...
T Consensus 155 ~~~~rr~~~~~~ggf-d~~~------~~~~eD~d~~~r~~~~ 189 (237)
T cd02526 155 GSLISLEALEKVGGF-DEDL------FIDYVDTEWCLRARSK 189 (237)
T ss_pred ceEEcHHHHHHhCCC-CHHH------cCccchHHHHHHHHHc
Confidence 677887765544321 1111 2458999998888754
No 66
>PLN02949 transferase, transferring glycosyl groups
Probab=90.53 E-value=1.3 Score=47.18 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=60.3
Q ss_pred cHHhhhccCcEEEecCC-CCCCcchHHHHHhhCceeeEeeCCcccCCCCCC-CCC-ceEEEecccccccHHHHHhcC---
Q psy16950 12 DFQVLLHNSTFCLVPRG-RRLGSFRFLETLQAGCIPVILSNGWVLPFDQVI-DWS-KAAVWADERLLLQVPDTVRSI--- 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G-~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~i-DW~-~~sv~i~~~~l~~l~~~L~~i--- 85 (430)
+..+++++|.+++.|.- .++ -.-..|||++||+||.-..+- |-.+++ ++. .-.-++. .+..++.+.+..+
T Consensus 347 el~~ll~~a~~~v~~s~~E~F-GivvlEAMA~G~PVIa~~~gG--p~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 347 DLVRLLGGAVAGLHSMIDEHF-GISVVEYMAAGAVPIAHNSAG--PKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHhCcEEEeCCccCCC-ChHHHHHHHcCCcEEEeCCCC--CcceeeecCCCCcccccC-CCHHHHHHHHHHHHhC
Confidence 45567888988887753 444 367999999998877754321 322322 111 1111111 1444444444332
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHhh
Q psy16950 86 SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRDR 122 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~R 122 (430)
++++..+|+++++.--++ | |.+......++.++.-
T Consensus 423 ~~~~r~~m~~~ar~~~~~-F-S~e~~~~~~~~~i~~l 457 (463)
T PLN02949 423 RETERLEIAAAARKRANR-F-SEQRFNEDFKDAIRPI 457 (463)
T ss_pred CHHHHHHHHHHHHHHHHH-c-CHHHHHHHHHHHHHHH
Confidence 567778898888765455 5 3456666666666543
No 67
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=90.33 E-value=0.88 Score=42.29 Aligned_cols=107 Identities=12% Similarity=0.207 Sum_probs=63.0
Q ss_pred EEEEec-cchHHHHHHHHHhcccc--cceEEEEcCCCCCCCCcccccccCCCCC--cccc--C---CC-cccc-cccccC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQY--VSRIIVLWSSPDKPVPAFLSRHNATLPP--IHIL--T---HI-TDIS-HRFLHT 237 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~--l~~IvVvWn~~~~~~P~~l~~~~~~~p~--~~Vp--~---~~-nsLn-nRF~p~ 237 (430)
|+|-+| +.+.|.+.|+++.+... --||+||=++........+.++....+. +.+- . .. ..+. .|-.-.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~ 80 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAI 80 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHH
Confidence 578889 56677788888754322 2488888555211111112221111121 1111 1 11 1111 111223
Q ss_pred CCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeec
Q psy16950 238 SLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGY 276 (430)
Q Consensus 238 ~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf 276 (430)
..-++|-|+.+|+|..+..+.|+..+..+.++|+.+||.
T Consensus 81 ~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~ 119 (219)
T cd06913 81 AQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGC 119 (219)
T ss_pred HhcCCCEEEEECCCccCChhHHHHHHHHHHhCCCcEEEE
Confidence 445789999999999999999998889998899988885
No 68
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=90.22 E-value=0.93 Score=47.85 Aligned_cols=101 Identities=14% Similarity=0.162 Sum_probs=60.8
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCC-CCC-----ceEEEecccccccHHHHHhcC-
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVI-DWS-----KAAVWADERLLLQVPDTVRSI- 85 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~i-DW~-----~~sv~i~~~~l~~l~~~L~~i- 85 (430)
..+.++.|.++++|.-..+...-.+|||++||.||. ++.- ...+.+ |.+ ...+.++..+..++.+.|..+
T Consensus 359 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g--g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 359 AHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG--GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL 435 (473)
T ss_pred HHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC--CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 456889999999997655555678999999997665 4422 222322 221 456667776666655554332
Q ss_pred -----CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 86 -----SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 86 -----~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
.++...+|.+++. ++.| |.+.++...+++.+
T Consensus 436 ~~~~~~~~~~~~~~~~~~---~~~f-sw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNAM---SQDF-SWDKSAKQYVELYR 471 (473)
T ss_pred HHHhcCHHHHHHHHHHHh---ccCC-CcHHHHHHHHHHHH
Confidence 4566677776653 2334 34455555555443
No 69
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=90.20 E-value=2.4 Score=38.89 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=58.9
Q ss_pred eEEEEEec-cchHHHHHHHHHhccc-ccceEEEEcCCCCCCCCcccccccCCCCCcc-ccCCCcccccccccCCCCCCce
Q psy16950 168 FTAIIYAQ-LGTSLYKVIRNVAHSQ-YVSRIIVLWSSPDKPVPAFLSRHNATLPPIH-ILTHITDISHRFLHTSLVTTNA 244 (430)
Q Consensus 168 fTvvi~ty-r~~~L~~~l~~l~~~~-~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~-Vp~~~nsLnnRF~p~~~i~T~A 244 (430)
.|++|.+| +...|.+.|..+.+.. .--+|+||=|+ . . +.....+.. +... +..+.+.=..+-.-....+++-
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~-s-~-d~~~~~~~~--~~~~~~~~~~g~~~a~n~g~~~a~~~~ 75 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGG-S-T-DGTVAIARS--AGVVVISSPKGRARQMNAGAAAARGDW 75 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCC-C-C-ccHHHHHhc--CCeEEEeCCcCHHHHHHHHHHhccCCE
Confidence 37899999 5556777787765543 44678888333 2 2 122111111 1111 1111111111222234566999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHhCCCCeeecC
Q psy16950 245 VLSLDEDATLNTDEIDFAFHVWKSFPERIVGYP 277 (430)
Q Consensus 245 Vl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~ 277 (430)
|+.+|+|..+..+-++..+......+. .+|..
T Consensus 76 i~~~D~D~~~~~~~l~~l~~~~~~~~~-~~~~~ 107 (221)
T cd02522 76 LLFLHADTRLPPDWDAAIIETLRADGA-VAGAF 107 (221)
T ss_pred EEEEcCCCCCChhHHHHHHHHhhcCCc-EEEEE
Confidence 999999999999999888776655444 55543
No 70
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=90.07 E-value=0.64 Score=48.04 Aligned_cols=113 Identities=9% Similarity=0.068 Sum_probs=71.0
Q ss_pred CceEEEEEec-cchHHHHHHHHHhcc--cccceEEEEcCCCCCCCCcccccccCCCC---Ccccc-CCCc---------c
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHS--QYVSRIIVLWSSPDKPVPAFLSRHNATLP---PIHIL-THIT---------D 229 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~--~~l~~IvVvWn~~~~~~P~~l~~~~~~~p---~~~Vp-~~~n---------s 229 (430)
...+|||-+| ..+.|.+.|+++.+. |.--||+||=|+......+.+.++....| .+.+- .+.+ .
T Consensus 40 p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A 119 (384)
T TIGR03469 40 PAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWA 119 (384)
T ss_pred CCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHH
Confidence 4689999999 667788888887553 32358999866522211111222222233 22222 1110 0
Q ss_pred cccccccCCCCC-----CceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcce
Q psy16950 230 ISHRFLHTSLVT-----TNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSH 281 (430)
Q Consensus 230 LnnRF~p~~~i~-----T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h 281 (430)
+|. -....+ .|.|+.+|+|+.++++.|+...+..++.+..+|+..+|..
T Consensus 120 ~n~---g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~ 173 (384)
T TIGR03469 120 VSQ---GIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLR 173 (384)
T ss_pred HHH---HHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEeccccc
Confidence 111 112233 8999999999999999999999998888777888777753
No 71
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=89.89 E-value=0.17 Score=47.07 Aligned_cols=169 Identities=14% Similarity=0.127 Sum_probs=78.3
Q ss_pred ceEEEEEec-cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcccccccCCCCCcc--c-cCCCc-c----ccccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAFLSRHNATLPPIH--I-LTHIT-D----ISHRFLH 236 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~l~~~~~~~p~~~--V-p~~~n-s----LnnRF~p 236 (430)
+.||+|-+| +.+.|.+.|+++.+..+- -+|+|+=|+.+.+..+.+.++.+.+|... + +.+.| . -.++-.-
T Consensus 2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~~ 81 (228)
T PF13641_consen 2 RVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNEA 81 (228)
T ss_dssp -EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHHH
T ss_pred EEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHHH
Confidence 378999999 667888899988775442 33444434423222222222223355532 2 22221 1 1122233
Q ss_pred CCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCCCCceecC------------CCCCcccc--
Q psy16950 237 TSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAKNSWGYTS------------KWTNDYSI-- 302 (430)
Q Consensus 237 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~~~w~Y~~------------~~~~~ySm-- 302 (430)
....++|.|+.+|||+.++++-|+...+......-.+||...+. ++.+..+.+.. .....+++
T Consensus 82 ~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (228)
T PF13641_consen 82 LAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFP---DNDRNWLTRLQDLFFARWHLRFRSGRRALGVAF 158 (228)
T ss_dssp HHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEE---TTCCCEEEE-TT--S-EETTTS-TT-B----S-
T ss_pred HHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEee---cCCCCHHHHHHHHHHhhhhhhhhhhhcccceee
Confidence 34567999999999999999999998888833334466632211 22222222211 11122221
Q ss_pred ccccceEeehhhhhhhcccchHHHHHHhhccCCchhHHHHHHHHh
Q psy16950 303 VLTGAAFYHRYYNYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSH 347 (430)
Q Consensus 303 VLt~aaF~Hr~Yl~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~ 347 (430)
+..+++++++.-++.-- --|+...+||.-+..-+..
T Consensus 159 ~~G~~~~~rr~~~~~~g---------~fd~~~~~eD~~l~~r~~~ 194 (228)
T PF13641_consen 159 LSGSGMLFRRSALEEVG---------GFDPFILGEDFDLCLRLRA 194 (228)
T ss_dssp B--TEEEEEHHHHHHH----------S--SSSSSHHHHHHHHHHH
T ss_pred ccCcEEEEEHHHHHHhC---------CCCCCCcccHHHHHHHHHH
Confidence 22345566665442221 1245677899988887776
No 72
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.84 E-value=0.98 Score=44.24 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=62.4
Q ss_pred cHHhhhccCcEEEecC---CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCC-CCCceEEEecccccccHHHHHhcC--
Q psy16950 12 DFQVLLHNSTFCLVPR---GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVI-DWSKAAVWADERLLLQVPDTVRSI-- 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~---G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~i-DW~~~sv~i~~~~l~~l~~~L~~i-- 85 (430)
+..+.++.+..+++|. +.+.+ ..++|||++|+ |||.++.-.. .+.+ +.....+.++..+..++.+.+..+
T Consensus 256 ~~~~~~~~ad~~i~ps~~~~e~~g-~~~~Ea~~~g~-Pvi~~~~~~~--~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 256 EKAALLAACDVFVFPSVERSEAFG-IVLLEAMAFGK-PVISTEIGTG--GSYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred HHHHHHHhCCEEEeCCcccccccc-hHHHHHHHcCC-CEEecCCCCc--hhHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 4567888899999985 33443 57999999975 6776663221 1222 224566677777776666655543
Q ss_pred CHHHHHHHHHHHHHHHHHHhh
Q psy16950 86 SATQVLAARQQTQVLWERYFS 106 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~yf~ 106 (430)
.+++..+|+++++...+++|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~s 352 (357)
T cd03795 332 DPELRERLGEAARERAEEEFT 352 (357)
T ss_pred CHHHHHHHHHHHHHHHHHhcc
Confidence 577889999999998888885
No 73
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=89.80 E-value=1.2 Score=45.65 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=59.1
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC-C-HH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI-S-AT 88 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i-~-~~ 88 (430)
.+..+.++.+..++.|.-.......++|||++|| |||.++.-- ..++++ +...+.++. +..++.+.|..+ . ..
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg--~~e~i~-~~~~~~~~~-~~~~l~~~l~~~l~~~~ 335 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGG--IPEVLP-PDMILLAEP-DVESIVRKLEEAISILR 335 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCC--chhhee-CCceeecCC-CHHHHHHHHHHHHhChh
Confidence 4567788899999888643222368999999998 566666432 334444 222344433 444444444322 1 11
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHhhc
Q psy16950 89 QVLAARQQTQVLWERYFSSIEKIVFTTFEIIRDRL 123 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~Ri 123 (430)
+...+.++++.-.+.-| |.+.++..++++.++=+
T Consensus 336 ~~~~~~~~~~~~~~~~f-s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 336 TGKHDPWSFHNRVKKMY-SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred hhhhHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHh
Confidence 12234444444344444 45677777777776544
No 74
>PRK00654 glgA glycogen synthase; Provisional
Probab=89.80 E-value=1.2 Score=46.98 Aligned_cols=101 Identities=19% Similarity=0.238 Sum_probs=61.1
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC-CCCCC-----ceEEEecccccccHHHHHhcC-
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ-VIDWS-----KAAVWADERLLLQVPDTVRSI- 85 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~-~iDW~-----~~sv~i~~~~l~~l~~~L~~i- 85 (430)
....++.|.+++.|.=......-.+|||++||+||+-..+ - ..| +.|.. .-.+.++..+...+.+.|..+
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G--~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l 426 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-G--LADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRAL 426 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-C--ccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3467899999999965555557799999999988874322 1 122 22321 346677777776665555432
Q ss_pred ----CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 86 ----SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 86 ----~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
.++...+|++++. +.-| |.+.++..++++.+
T Consensus 427 ~~~~~~~~~~~~~~~~~---~~~f-sw~~~a~~~~~lY~ 461 (466)
T PRK00654 427 ELYRQPPLWRALQRQAM---AQDF-SWDKSAEEYLELYR 461 (466)
T ss_pred HHhcCHHHHHHHHHHHh---ccCC-ChHHHHHHHHHHHH
Confidence 3455667766654 2333 34455555555544
No 75
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=89.66 E-value=1.2 Score=41.79 Aligned_cols=103 Identities=14% Similarity=0.017 Sum_probs=57.2
Q ss_pred ceEEEEEec-cchHHHHHHHHHhccccc---ceEEEEcCCCCCCCCcccccccCCC----CCcc-cc-CCCcc--ccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYV---SRIIVLWSSPDKPVPAFLSRHNATL----PPIH-IL-THITD--ISHRF 234 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l---~~IvVvWn~~~~~~P~~l~~~~~~~----p~~~-Vp-~~~ns--LnnRF 234 (430)
.+||||-+| ..+.|.+.|+++.+..+. -+|+|+=|+ .......+.++...+ +.+. +. ..++. -.++=
T Consensus 2 ~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s-~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~n 80 (232)
T cd06437 2 MVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDS-TDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALA 80 (232)
T ss_pred ceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECC-CCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHHH
Confidence 479999999 667788888888664443 467777332 211111111110011 1111 11 11121 11221
Q ss_pred ccCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCC
Q psy16950 235 LHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPE 271 (430)
Q Consensus 235 ~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~ 271 (430)
.-....+.+-|+.+|.|..++++-|+-... ..++|+
T Consensus 81 ~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~-~~~~~~ 116 (232)
T cd06437 81 EGMKVAKGEYVAIFDADFVPPPDFLQKTPP-YFADPK 116 (232)
T ss_pred HHHHhCCCCEEEEEcCCCCCChHHHHHhhh-hhcCCC
Confidence 223456899999999999999999988433 334553
No 76
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=89.34 E-value=1.4 Score=41.75 Aligned_cols=113 Identities=12% Similarity=0.179 Sum_probs=66.6
Q ss_pred ceEEEEEec-cchHHHHHHHHHhccccc---ceEEEEcCCCCCCCCcccccccC-CC-CCcccc---CCCc--ccccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYV---SRIIVLWSSPDKPVPAFLSRHNA-TL-PPIHIL---THIT--DISHRFL 235 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l---~~IvVvWn~~~~~~P~~l~~~~~-~~-p~~~Vp---~~~n--sLnnRF~ 235 (430)
.+||+|-+| ..+.|.+.|+++.+..+- -||+||=++ .. +..+..++. .. +...|. ...| .-..+-.
T Consensus 2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~-s~--d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEE-DD--EETIAAARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECC-CC--chHHHHHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 479999999 667788888888664432 367777554 22 222111111 01 111211 1111 0111112
Q ss_pred cCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCccee
Q psy16950 236 HTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHF 282 (430)
Q Consensus 236 p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~ 282 (430)
-....+.|-|+.+|+|..+..+.|+.....+.+....++...++...
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~ 125 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNY 125 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEe
Confidence 23346789999999999999999999999998764555544455433
No 77
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=89.31 E-value=1.6 Score=45.67 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=51.5
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCC---CCceEEEecccccccHHHHHhc---
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVID---WSKAAVWADERLLLQVPDTVRS--- 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iD---W~~~sv~i~~~~l~~l~~~L~~--- 84 (430)
.+..++|+.|..++.|.-......-++|||++||.||. ++. --|.++++. =..-.+.+. +..++.+.+..
T Consensus 316 ~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~ 391 (419)
T cd03806 316 EELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILS 391 (419)
T ss_pred HHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHh
Confidence 35668899999999886444445789999999997765 442 125555553 122233232 34444333322
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16950 85 ISATQVLAARQQTQVLWER 103 (430)
Q Consensus 85 i~~~~i~~mr~~~~~l~~~ 103 (430)
.++++...|++..+.+-++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~ 410 (419)
T cd03806 392 LSEEERLRIRRAARSSVKR 410 (419)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 2555555566655554444
No 78
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=89.04 E-value=2 Score=47.05 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=65.1
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHH---hcCC--
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTV---RSIS-- 86 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L---~~i~-- 86 (430)
+-.+.|+.+..++.|.-......-++|||++|| |||.++.--. .+.|.=..-.+.++..+...+.+.+ .++.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~--~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l 541 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGS--AECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL 541 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCc--HHHcccCCcEEEECCCChhhHHHHHHHHHHHHHH
Confidence 556678888888888543333578999999999 9998874322 2333323445666766543332222 2211
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHh
Q psy16950 87 ATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRD 121 (430)
Q Consensus 87 ~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~ 121 (430)
.++..+|.++++..-+..| |.+.++...++++..
T Consensus 542 l~~~~~mg~~ARe~V~e~F-S~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 542 WRSRTGICQQTQSFLQERF-TVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHh
Confidence 1233456677777666666 467777777777654
No 79
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=88.72 E-value=0.91 Score=41.74 Aligned_cols=105 Identities=10% Similarity=0.075 Sum_probs=60.0
Q ss_pred EEEEec-cchHHHHHHHHHhcccc---cceEEEEcCCCCCCCCcccccccCCC--CCcc-ccCC--Cc-ccc-cccccCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQY---VSRIIVLWSSPDKPVPAFLSRHNATL--PPIH-ILTH--IT-DIS-HRFLHTS 238 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~---l~~IvVvWn~~~~~~P~~l~~~~~~~--p~~~-Vp~~--~n-sLn-nRF~p~~ 238 (430)
|||-|| +.+.|.+.|+.+.+... .-+|+||-++........+. +.... +.+. ++.+ .| ... .+-.-..
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~ 79 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSRVSISGKKNALTTAIK 79 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccCcccchhHHHHHHHHH
Confidence 578888 77778888888755433 25999998883322111111 01111 2221 1111 11 111 1111123
Q ss_pred CCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeee
Q psy16950 239 LVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVG 275 (430)
Q Consensus 239 ~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVG 275 (430)
...+|-|+.+|+|..+..+-|+...+.-.+.+.-+|.
T Consensus 80 ~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~ 116 (229)
T cd04192 80 AAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVA 116 (229)
T ss_pred HhcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEe
Confidence 4678999999999999999998888765555444443
No 80
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=88.55 E-value=0.99 Score=46.39 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=66.4
Q ss_pred ceEEEEEec-cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcccccccCCCCCcccc---CCC-----ccccccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAFLSRHNATLPPIHIL---THI-----TDISHRFLH 236 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp---~~~-----nsLnnRF~p 236 (430)
..||+|-+| ..+.|.+.|+++.+..+= -||+|+=++.+.+..+.+.++.+.+|...|. .+. .+.+|-..-
T Consensus 42 ~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~~l~~~ 121 (373)
T TIGR03472 42 PVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVSNLINM 121 (373)
T ss_pred CeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHHHHHHH
Confidence 478999999 666788888887554332 5887764442222122223333445653321 111 122222212
Q ss_pred CCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCC-CeeecCCc
Q psy16950 237 TSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPE-RIVGYPAR 279 (430)
Q Consensus 237 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~-rlVGf~~R 279 (430)
...-++|-|+.+|+|+.++++-|+......+ .|+ -+|+-.++
T Consensus 122 ~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~-~~~v~~V~~~~~ 164 (373)
T TIGR03472 122 LPHARHDILVIADSDISVGPDYLRQVVAPLA-DPDVGLVTCLYR 164 (373)
T ss_pred HHhccCCEEEEECCCCCcChhHHHHHHHHhc-CCCcceEecccc
Confidence 3567899999999999999999988877664 554 36654333
No 81
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=88.48 E-value=0.94 Score=40.60 Aligned_cols=106 Identities=13% Similarity=0.150 Sum_probs=57.3
Q ss_pred EEEEec-cchHHHHHHHHHhcc----cccceEEEEcCCCCCCCCcccccccCCCCCcccc-CCCc--ccccccccCCCCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHS----QYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-THIT--DISHRFLHTSLVT 241 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~----~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~~n--sLnnRF~p~~~i~ 241 (430)
++|-|| +...|.++|+.+.+. ..--+|+||=|+......+.+.++....|.+.+- ..+| .-+.+-.-....+
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~a~ 80 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHAR 80 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHhcC
Confidence 578888 555666666655332 2345888886552211111112221222332221 1222 1111111223467
Q ss_pred CceEEEecCCCCCChHHHHHHHHHHHhCCCCeee
Q psy16950 242 TNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVG 275 (430)
Q Consensus 242 T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVG 275 (430)
.|.|+.+|+|..++.+.|+...+...+..+-+.|
T Consensus 81 ~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~v~g 114 (181)
T cd04187 81 GDAVITMDADLQDPPELIPEMLAKWEEGYDVVYG 114 (181)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHhCCCcEEEE
Confidence 7999999999999999999999985444443444
No 82
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=88.36 E-value=1.2 Score=41.27 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=91.4
Q ss_pred ceEEEEEec-cc-hHHHHHHHHHhcccccc---eEEEEcCCCCCCCCcc---cccccCCCCCcccc-CCCcc---ccccc
Q psy16950 167 QFTAIIYAQ-LG-TSLYKVIRNVAHSQYVS---RIIVLWSSPDKPVPAF---LSRHNATLPPIHIL-THITD---ISHRF 234 (430)
Q Consensus 167 ~fTvvi~ty-r~-~~L~~~l~~l~~~~~l~---~IvVvWn~~~~~~P~~---l~~~~~~~p~~~Vp-~~~ns---LnnRF 234 (430)
+.+++|-+| +. ..|.+.|+++.+...-. +|+||=|+ .. ... +.++...+ .+.+- ...|. -.++-
T Consensus 2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~-s~--d~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDG-RR--PELRALAAELGVEY-GYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCC-Cc--hhHHHHHHHhhccc-CceEEEeCCCCCCcHHHHH
Confidence 478999999 44 45677888887776665 78887443 21 122 11111111 11111 11111 11111
Q ss_pred ccCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCC-eeecCCcceeccCCCCCcee---c------------CCCCC
Q psy16950 235 LHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPER-IVGYPARSHFWDDAKNSWGY---T------------SKWTN 298 (430)
Q Consensus 235 ~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf~~R~h~~~~~~~~w~Y---~------------~~~~~ 298 (430)
.-......|-|+.+|+|..++++.|+.....+.++|+- +|+...+. .+.....|.. . .....
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFF--YNPDPFDWLADGAPNEQELFYGVIQPGRDRW 155 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEE--ecCCcchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 12234589999999999999999999999999887653 45432221 1111110000 0 00011
Q ss_pred ccccccccceEeehhhhhhhcccchHHHHHHhhccCCchhHHHHHHHHh
Q psy16950 299 DYSIVLTGAAFYHRYYNYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSH 347 (430)
Q Consensus 299 ~ySmVLt~aaF~Hr~Yl~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~ 347 (430)
..+.+.....+++|..++..-. -|+..-+||..+..-+..
T Consensus 156 ~~~~~~g~~~~~r~~~~~~ig~---------~~~~~~~eD~~l~~r~~~ 195 (234)
T cd06421 156 GAAFCCGSGAVVRREALDEIGG---------FPTDSVTEDLATSLRLHA 195 (234)
T ss_pred CCceecCceeeEeHHHHHHhCC---------CCccceeccHHHHHHHHH
Confidence 2445556678888877654321 123455899988876655
No 83
>PRK14099 glycogen synthase; Provisional
Probab=88.27 E-value=2.4 Score=45.49 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=61.0
Q ss_pred HHhhh-ccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCC--------ceEEEecccccccHHHHHh
Q psy16950 13 FQVLL-HNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWS--------KAAVWADERLLLQVPDTVR 83 (430)
Q Consensus 13 y~~~l-~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~--------~~sv~i~~~~l~~l~~~L~ 83 (430)
-...+ +.|.+.+.|.-..+...-.+|||++||+||+ ++.--++ +.++|.. .-.+.++..+...+.+.|.
T Consensus 362 l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~ 439 (485)
T PRK14099 362 LAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAALR 439 (485)
T ss_pred HHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHHH
Confidence 34455 4688888886555445789999999999988 4421111 1123332 2467777777776666554
Q ss_pred c----C-CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHh
Q psy16950 84 S----I-SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRD 121 (430)
Q Consensus 84 ~----i-~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~ 121 (430)
. + .++...+|+++++ ++-| |.+.++...+++.++
T Consensus 440 ~a~~l~~d~~~~~~l~~~~~---~~~f-Sw~~~a~~y~~lY~~ 478 (485)
T PRK14099 440 KTAALFADPVAWRRLQRNGM---TTDV-SWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHhcCHHHHHHHHHHhh---hhcC-ChHHHHHHHHHHHHH
Confidence 3 2 4667788887775 2333 334444555554443
No 84
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=88.10 E-value=2.8 Score=40.72 Aligned_cols=163 Identities=13% Similarity=0.059 Sum_probs=83.4
Q ss_pred ec-c-chHHHHHHHHHhcccccceEEEEcCCCCCCCCcccccccCCCCCcccc-CCCc-ccccccccC----CCCCCceE
Q psy16950 174 AQ-L-GTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-THIT-DISHRFLHT----SLVTTNAV 245 (430)
Q Consensus 174 ty-r-~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~~n-sLnnRF~p~----~~i~T~AV 245 (430)
|| + .+.|.+.|+++.+- ..+|+||=|++... ..+.+.....+.+.+- .+.| .+..-+.-. .+-.+|.|
T Consensus 2 tyn~~~~~l~~~l~sl~~q--~~~iiVVDN~S~~~--~~~~~~~~~~~~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d~i 77 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQ--VDRIIAVDNSPHSD--QPLKNARLRGQKIALIHLGDNQGIAGAQNQGLDASFRRGVQGV 77 (281)
T ss_pred ccCccHHHHHHHHHHHHhc--CCEEEEEECcCCCc--HhHHHHhccCCCeEEEECCCCcchHHHHHHHHHHHHHCCCCEE
Confidence 56 4 35677788877653 35777766663211 2222211123444322 2222 211111110 11267999
Q ss_pred EEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceeccCCC--C-----Cceec----CCC--CCccccccccceEeeh
Q psy16950 246 LSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWDDAK--N-----SWGYT----SKW--TNDYSIVLTGAAFYHR 312 (430)
Q Consensus 246 l~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~~~~--~-----~w~Y~----~~~--~~~ySmVLt~aaF~Hr 312 (430)
+.+|||..+..+.|+...+.+.+.+..+....|+.-..+... + .+.+. ... ..+-+.++++++++++
T Consensus 78 ~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~ 157 (281)
T TIGR01556 78 LLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITR 157 (281)
T ss_pred EEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecccccCCceeccEEEcCcceeeH
Confidence 999999999999999999999876544333335432111100 0 00000 000 1123456777888999
Q ss_pred hhhhhhcccchHHHHHHhhccCCchhHHHHHHHHh
Q psy16950 313 YYNYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSH 347 (430)
Q Consensus 313 ~Yl~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~ 347 (430)
.-++..-- +.+.. ...+||.-+.+-+..
T Consensus 158 ~~~~~iG~-fde~~------fi~~~D~e~~~R~~~ 185 (281)
T TIGR01556 158 EVYQRLGM-MDEEL------FIDHVDTEWSLRAQN 185 (281)
T ss_pred HHHHHhCC-ccHhh------cccchHHHHHHHHHH
Confidence 77643321 11111 235788888776544
No 85
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=87.87 E-value=1.3 Score=44.71 Aligned_cols=86 Identities=16% Similarity=0.076 Sum_probs=51.7
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC-CHH---
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI-SAT--- 88 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i-~~~--- 88 (430)
+.+.++.+..++.|........-++|||++| +|||.++..-- ..++|.=..-.+.++..+..++.+.+..+ ...
T Consensus 251 ~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g-~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 251 VQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSG-PRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKY 328 (359)
T ss_pred HHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCC-hHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccC
Confidence 4556677888888865433357899999999 68888872221 22344323445666777777766666554 222
Q ss_pred HHHHHHHHHHHH
Q psy16950 89 QVLAARQQTQVL 100 (430)
Q Consensus 89 ~i~~mr~~~~~l 100 (430)
....+++.++..
T Consensus 329 ~~~~~~~~~~~~ 340 (359)
T PRK09922 329 QHDAIPNSIERF 340 (359)
T ss_pred CHHHHHHHHHHh
Confidence 234455554443
No 86
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=87.54 E-value=2.5 Score=37.61 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=56.7
Q ss_pred EEEEEec-cchHHHHHHHHHhc--ccccceEEEEcCCCCCCCCcccccccCCCCCccccCCCc--ccccccccCCCCCCc
Q psy16950 169 TAIIYAQ-LGTSLYKVIRNVAH--SQYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHILTHIT--DISHRFLHTSLVTTN 243 (430)
Q Consensus 169 Tvvi~ty-r~~~L~~~l~~l~~--~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp~~~n--sLnnRF~p~~~i~T~ 243 (430)
|+||-+| +...|.+.|..+.+ .+. -||+||=|+........+.++... .+.+...+| .-.+|=.-....+++
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~-~evivvDd~s~d~~~~~~~~~~~~--~~~~~~~~~~g~~~a~n~~~~~a~~~ 77 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPN-IEYIVIDGGSTDGTVDIIKKYEDK--ITYWISEPDKGIYDAMNKGIALATGD 77 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCC-ceEEEEeCCCCccHHHHHHHhHhh--cEEEEecCCcCHHHHHHHHHHHcCCC
Confidence 5899999 66677788887744 333 588888444111111112221110 011111111 111111122345789
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHhCCC
Q psy16950 244 AVLSLDEDATLNTDEIDFAFHVWKSFPE 271 (430)
Q Consensus 244 AVl~~DDDv~~~~~~l~faF~~Wr~~p~ 271 (430)
-|+.+|||..+..+.++.....+.+.++
T Consensus 78 ~v~~ld~D~~~~~~~~~~~~~~~~~~~~ 105 (202)
T cd06433 78 IIGFLNSDDTLLPGALLAVVAAFAEHPE 105 (202)
T ss_pred EEEEeCCCcccCchHHHHHHHHHHhCCC
Confidence 9999999999999999888877877764
No 87
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=87.46 E-value=1.2 Score=46.41 Aligned_cols=89 Identities=12% Similarity=0.175 Sum_probs=55.3
Q ss_pred ccHHhhhccCcEEEecC----CCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC-
Q psy16950 11 YDFQVLLHNSTFCLVPR----GRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI- 85 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~----G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i- 85 (430)
.++.+.|+.|..+++|. |.+. ..-++|||++|+ |||.++.- ...++|.=..-.+.++ +..++.+.+..+
T Consensus 306 ~~~~~~l~~aDv~v~~~~~~~~~~~-p~~~~Eama~G~-PVI~s~~~--~~~eiv~~~~~G~lv~--d~~~la~~i~~ll 379 (415)
T cd03816 306 EDYPKLLASADLGVSLHTSSSGLDL-PMKVVDMFGCGL-PVCALDFK--CIDELVKHGENGLVFG--DSEELAEQLIDLL 379 (415)
T ss_pred HHHHHHHHhCCEEEEccccccccCC-cHHHHHHHHcCC-CEEEeCCC--CHHHHhcCCCCEEEEC--CHHHHHHHHHHHH
Confidence 46778889999988643 3333 457999999999 99998743 2224443233334442 444444444332
Q ss_pred ----CHHHHHHHHHHHHHHHHHHh
Q psy16950 86 ----SATQVLAARQQTQVLWERYF 105 (430)
Q Consensus 86 ----~~~~i~~mr~~~~~l~~~yf 105 (430)
++++..+|.++++..-+..|
T Consensus 380 ~~~~~~~~~~~m~~~~~~~~~~~~ 403 (415)
T cd03816 380 SNFPNRGKLNSLKKGAQEESELRW 403 (415)
T ss_pred hcCCCHHHHHHHHHHHHHhhhcCH
Confidence 26788999888876554433
No 88
>PRK14098 glycogen synthase; Provisional
Probab=87.05 E-value=2.1 Score=45.91 Aligned_cols=82 Identities=9% Similarity=0.078 Sum_probs=51.4
Q ss_pred HhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCC---CceEEEecccccccHHHHHhcC-----
Q psy16950 14 QVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDW---SKAAVWADERLLLQVPDTVRSI----- 85 (430)
Q Consensus 14 ~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW---~~~sv~i~~~~l~~l~~~L~~i----- 85 (430)
.+.++.|.++++|.-..+...-.+|||++||+||+...+- ++ +.+.|. ..-.+.++..+...+.+.|..+
T Consensus 376 ~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~ 453 (489)
T PRK14098 376 HLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYH 453 (489)
T ss_pred HHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHc
Confidence 4678999999999755444567899999999999865431 11 001121 2345666776766665555431
Q ss_pred CHHHHHHHHHHH
Q psy16950 86 SATQVLAARQQT 97 (430)
Q Consensus 86 ~~~~i~~mr~~~ 97 (430)
.+++..+|+++.
T Consensus 454 ~~~~~~~~~~~~ 465 (489)
T PRK14098 454 DEERWEELVLEA 465 (489)
T ss_pred CHHHHHHHHHHH
Confidence 355666666544
No 89
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=86.47 E-value=1.3 Score=40.26 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=63.5
Q ss_pred EEEEEec-cc--hHHHHHHHHHhcccc-cceEEEEcCCCCCCCCcc-cccccCCCCCcc-ccCCCc--ccccccccCCCC
Q psy16950 169 TAIIYAQ-LG--TSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPAF-LSRHNATLPPIH-ILTHIT--DISHRFLHTSLV 240 (430)
Q Consensus 169 Tvvi~ty-r~--~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~~-l~~~~~~~p~~~-Vp~~~n--sLnnRF~p~~~i 240 (430)
||+|-|| +. ..|.+.|+++.+-.. -.+|+||=++....--.. +.++....+ +. +..+.| .-.+|-.-...-
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~G~~~a~N~g~~~a 79 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNRGLGKALNEGLKHC 79 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccccHHHHHHHHHHhc
Confidence 5889999 43 468888888755433 367877766621110001 111111122 22 212222 122333333456
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHHhCCCC-eee
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWKSFPER-IVG 275 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVG 275 (430)
.+|.|+.+|+|..++.+.|+...+.+.++|+- +||
T Consensus 80 ~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~ 115 (201)
T cd04195 80 TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVG 115 (201)
T ss_pred CCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEc
Confidence 78999999999999999999999999888754 554
No 90
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=86.18 E-value=1.8 Score=35.93 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=57.4
Q ss_pred EEEEec-cchHHHHHHHHHhccc-ccceEEEEcCCCCCCCCcccccccCC-CCCcccc--CCCcccccccccCCCCCCce
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQ-YVSRIIVLWSSPDKPVPAFLSRHNAT-LPPIHIL--THITDISHRFLHTSLVTTNA 244 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~-~l~~IvVvWn~~~~~~P~~l~~~~~~-~p~~~Vp--~~~nsLnnRF~p~~~i~T~A 244 (430)
++|.++ +...|.+.|+++.+.. ...+|+|+=|+.+......+.++... .+...+. ...+.-.++-.-.....++.
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 80 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAARGEY 80 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHhcCCE
Confidence 467788 6677788888887765 35677776666322211111111110 0111111 11222222222333448999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHhCCCC
Q psy16950 245 VLSLDEDATLNTDEIDFAFHVWKSFPER 272 (430)
Q Consensus 245 Vl~~DDDv~~~~~~l~faF~~Wr~~p~r 272 (430)
|+.+|+|..+..+.++.........++.
T Consensus 81 v~~~d~D~~~~~~~~~~~~~~~~~~~~~ 108 (156)
T cd00761 81 ILFLDADDLLLPDWLERLVAELLADPEA 108 (156)
T ss_pred EEEECCCCccCccHHHHHHHHHhcCCCc
Confidence 9999999999998888764555555544
No 91
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=84.07 E-value=3.2 Score=39.52 Aligned_cols=108 Identities=10% Similarity=0.053 Sum_probs=59.8
Q ss_pred CCceEEEEEec-cchHHHHHHHHHhcc-cc--cceEEEEcCCCCCCCCcccccccCCCCC--cc-ccCCCc-----cccc
Q psy16950 165 SEQFTAIIYAQ-LGTSLYKVIRNVAHS-QY--VSRIIVLWSSPDKPVPAFLSRHNATLPP--IH-ILTHIT-----DISH 232 (430)
Q Consensus 165 ~~~fTvvi~ty-r~~~L~~~l~~l~~~-~~--l~~IvVvWn~~~~~~P~~l~~~~~~~p~--~~-Vp~~~n-----sLnn 232 (430)
....||||-+| ....|..++..+.+. .. --+|+||=++....-...+.++...++. +. ++.+.| .+|.
T Consensus 8 ~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~n~ 87 (243)
T PLN02726 8 AMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAYIH 87 (243)
T ss_pred CceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHHHH
Confidence 35699999999 444455444444221 11 3488888555221111111222112222 22 112222 1222
Q ss_pred ccccCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCC-CCeee
Q psy16950 233 RFLHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFP-ERIVG 275 (430)
Q Consensus 233 RF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p-~rlVG 275 (430)
= ....+++.|+.+|+|..++.+.|+..++...+.. +-++|
T Consensus 88 g---~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g 128 (243)
T PLN02726 88 G---LKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTG 128 (243)
T ss_pred H---HHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 1 2245789999999999999999999998887654 44445
No 92
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=83.90 E-value=0.65 Score=47.74 Aligned_cols=71 Identities=17% Similarity=0.209 Sum_probs=48.0
Q ss_pred ccHHhhhccCcEEEecCCC---CCCcchHHHHHhhCceeeEee--C-Cc--ccCCCCCCCCCceEEEecccccccHHHHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGR---RLGSFRFLETLQAGCIPVILS--N-GW--VLPFDQVIDWSKAAVWADERLLLQVPDTV 82 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~---~~~s~Rl~eal~~GCIPVii~--d-~~--~LPF~~~iDW~~~sv~i~~~~l~~l~~~L 82 (430)
.++.+.+++-+|.|+..-. +.-+--|++|+.+|||||+.+ . ++ .+|=...|+.++|. ...+|.+.|
T Consensus 219 ~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~La~yl 292 (349)
T PF00852_consen 219 DCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKELADYL 292 (349)
T ss_dssp S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHHHHHHH
T ss_pred ccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHHHHHHH
Confidence 3588999999999997543 334568999999999999999 3 22 36667777766652 355677777
Q ss_pred hcCCH
Q psy16950 83 RSISA 87 (430)
Q Consensus 83 ~~i~~ 87 (430)
+.+..
T Consensus 293 ~~l~~ 297 (349)
T PF00852_consen 293 KYLDK 297 (349)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66643
No 93
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=83.84 E-value=3.5 Score=43.42 Aligned_cols=110 Identities=13% Similarity=0.187 Sum_probs=66.3
Q ss_pred CceEEEEEec-cchHHHHHHHHHhcc--cccceEEEEcCCCCCCCCcccccccCCCCCcccc--CC----Cccccccccc
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHS--QYVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL--TH----ITDISHRFLH 236 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~--~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp--~~----~nsLnnRF~p 236 (430)
...|++|-+| ....+.+.|+++.+. |. -||+||=++.+....+.+.++....|.+.|. .. .+.+|.=
T Consensus 75 p~vsViIP~yNE~~~i~~~l~sll~q~yp~-~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~g--- 150 (444)
T PRK14583 75 PLVSILVPCFNEGLNARETIHAALAQTYTN-IEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALRMG--- 150 (444)
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHcCCCCC-eEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHHHH---
Confidence 4689999999 555677788776553 43 4788886552211111122222223444322 11 1122211
Q ss_pred CCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCC-eeecCCc
Q psy16950 237 TSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPER-IVGYPAR 279 (430)
Q Consensus 237 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf~~R 279 (430)
...-++|-|+.+|.|..++++.|+...+...++|+- .|+-.++
T Consensus 151 l~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~ 194 (444)
T PRK14583 151 AAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPR 194 (444)
T ss_pred HHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccce
Confidence 123578999999999999999999988888777753 4554444
No 94
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=83.61 E-value=3.7 Score=41.64 Aligned_cols=112 Identities=19% Similarity=0.121 Sum_probs=63.5
Q ss_pred CCCceEEEEEec-cchHHHHHHHHH----hcccccceEEEEcCCCCCCCCcccccccCCC-CCcc-ccCCCccc--cccc
Q psy16950 164 ASEQFTAIIYAQ-LGTSLYKVIRNV----AHSQYVSRIIVLWSSPDKPVPAFLSRHNATL-PPIH-ILTHITDI--SHRF 234 (430)
Q Consensus 164 ~~~~fTvvi~ty-r~~~L~~~l~~l----~~~~~l~~IvVvWn~~~~~~P~~l~~~~~~~-p~~~-Vp~~~nsL--nnRF 234 (430)
+..+.++||-+| ..+.|-++++.+ .+.+.--||+||=++....-.+.+.++.... +.+. +..++|.= ....
T Consensus 4 ~~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~ 83 (325)
T PRK10714 4 PIKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIM 83 (325)
T ss_pred CCCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHH
Confidence 345699999999 445555555544 3333446899995552211111111111111 1111 11122210 1111
Q ss_pred ccCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeec
Q psy16950 235 LHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGY 276 (430)
Q Consensus 235 ~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf 276 (430)
.-...-+.|.|+.+|.|...++++|+...+.|++..| +||.
T Consensus 84 ~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~~~D-vV~~ 124 (325)
T PRK10714 84 AGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYD-VVGT 124 (325)
T ss_pred HHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHhhCC-EEEE
Confidence 1123457899999999999999999999999987655 6664
No 95
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=83.58 E-value=2.1 Score=45.09 Aligned_cols=102 Identities=16% Similarity=0.242 Sum_probs=63.3
Q ss_pred ceEEEEEec-cchHHHHHHHHHhcccccc---eEEEEcCCCCCCCCcc-cccccCCCCCcccc------CCCcccccccc
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQYVS---RIIVLWSSPDKPVPAF-LSRHNATLPPIHIL------THITDISHRFL 235 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~l~---~IvVvWn~~~~~~P~~-l~~~~~~~p~~~Vp------~~~nsLnnRF~ 235 (430)
.+||+|-+| ..+.|.+.|+++.+..+-. +|+||=|+ ....-.. +.++....|.+.+. +....+|.=+
T Consensus 50 ~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~-StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN~gl- 127 (439)
T TIGR03111 50 DITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQ-STDDSFQVFCRAQNEFPGLSLRYMNSDQGKAKALNAAI- 127 (439)
T ss_pred CEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECC-CChhHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHHHHH-
Confidence 589999999 5677788888876654332 68888444 2211111 11121223444432 1112233222
Q ss_pred cCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCC
Q psy16950 236 HTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPER 272 (430)
Q Consensus 236 p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r 272 (430)
...++|-|+.+|+|..+..+.|+-..+...++|+-
T Consensus 128 --~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v 162 (439)
T TIGR03111 128 --YNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDI 162 (439)
T ss_pred --HHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCe
Confidence 34668899999999999999999888888777763
No 96
>PLN02939 transferase, transferring glycosyl groups
Probab=83.12 E-value=4.6 Score=46.88 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=51.0
Q ss_pred hhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCC--------ceEEEecccccccHHHHHhc--
Q psy16950 15 VLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWS--------KAAVWADERLLLQVPDTVRS-- 84 (430)
Q Consensus 15 ~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~--------~~sv~i~~~~l~~l~~~L~~-- 84 (430)
..++.|.++++|.=.-+...-.+|||++||+||+...+- + -+-+.|++ .-.+.++..+...+...|..
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L-~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL 929 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-L-NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAF 929 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-C-cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHH
Confidence 478999999999655554577999999999999754331 1 11123332 22455566666555444432
Q ss_pred --C--CHHHHHHHHHHH
Q psy16950 85 --I--SATQVLAARQQT 97 (430)
Q Consensus 85 --i--~~~~i~~mr~~~ 97 (430)
+ .++...+|++++
T Consensus 930 ~~~~~dpe~~~~L~~~a 946 (977)
T PLN02939 930 NYYKRKPEVWKQLVQKD 946 (977)
T ss_pred HHhccCHHHHHHHHHHH
Confidence 2 467778887765
No 97
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=82.90 E-value=3.2 Score=45.69 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=43.3
Q ss_pred cccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccC-C-CCCC-CCCceEEEec
Q psy16950 10 RYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLP-F-DQVI-DWSKAAVWAD 71 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LP-F-~~~i-DW~~~sv~i~ 71 (430)
..+|.+.++.+.-++.|.-..++..-..||+++| +|||.++.--++ + .+++ +-....+.|.
T Consensus 465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~ 528 (590)
T cd03793 465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIV 528 (590)
T ss_pred CcchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEe
Confidence 4579999999999999976666568899999999 599999854332 0 2333 2224566665
No 98
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=81.65 E-value=2.2 Score=44.21 Aligned_cols=102 Identities=15% Similarity=0.171 Sum_probs=58.2
Q ss_pred cHHhhhccCcEEEecCCC-CCCcchHHHHHhhCceeeEeeCCcccCCCCCCC---CCceEEEecccccccHHHHHhcC--
Q psy16950 12 DFQVLLHNSTFCLVPRGR-RLGSFRFLETLQAGCIPVILSNGWVLPFDQVID---WSKAAVWADERLLLQVPDTVRSI-- 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iD---W~~~sv~i~~~~l~~l~~~L~~i-- 85 (430)
+-.+.++.|..|+++... ..+..-++||+++|| |||.++... -+.+..+ =..+.+. ..+..++.+.|..+
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~--~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQ--VEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEE--ECCHHHHHHHHHHHhc
Confidence 456778899987775432 112345899999996 888765321 1222211 1233333 33444444444332
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHh
Q psy16950 86 SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRD 121 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~ 121 (430)
.++...+|.++++...+... .++..+++.+.+
T Consensus 388 ~~~~~~~m~~~a~~~~~~~~----~~~~~~~~~l~~ 419 (425)
T PRK05749 388 DPDARQAYGEAGVAFLKQNQ----GALQRTLQLLEP 419 (425)
T ss_pred CHHHHHHHHHHHHHHHHhCc----cHHHHHHHHHHH
Confidence 46777888888876665543 445555666554
No 99
>PHA01633 putative glycosyl transferase group 1
Probab=81.47 E-value=3.3 Score=42.44 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=34.5
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCC
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVID 62 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iD 62 (430)
+-.+.++.|.+.+.|.-......-+.|||++|| |||.++-- |..|+.+
T Consensus 216 dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~--~l~Ei~g 263 (335)
T PHA01633 216 YIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP--PLDEFTS 263 (335)
T ss_pred HHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC--CceeecC
Confidence 345788889988888644444578999999999 99988742 4444433
No 100
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=81.30 E-value=8.6 Score=41.48 Aligned_cols=103 Identities=10% Similarity=0.144 Sum_probs=58.9
Q ss_pred cHHhhhccCcEEEecC-CCCCCcchHHHHHhhCceeeEeeCC-cccCCCCCCCCCceEEEecc----c---c-cccHHHH
Q psy16950 12 DFQVLLHNSTFCLVPR-GRRLGSFRFLETLQAGCIPVILSNG-WVLPFDQVIDWSKAAVWADE----R---L-LLQVPDT 81 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~-G~~~~s~Rl~eal~~GCIPVii~d~-~~LPF~~~iDW~~~sv~i~~----~---~-l~~l~~~ 81 (430)
+-.+.++.+.-++.|. ..++ ..-++|||++|| |||.+|- .- | .+.|.=..-.+.++. . + ..++.+.
T Consensus 385 ~~~~~~~~adv~v~pS~~Egf-gl~~lEAma~G~-PVI~~dv~~G-~-~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~ 460 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGF-GLTLMEAVGSGL-GMIGFDVNYG-N-PTFIEDNKNGYLIPIDEEEDDEDQIITALAEK 460 (500)
T ss_pred CHHHHHHhCCEEEEcCccccc-cHHHHHHHHhCC-CEEEecCCCC-C-HHHccCCCCEEEEeCCccccchhHHHHHHHHH
Confidence 4556677777777765 3444 477999999997 7776662 11 1 233322333445541 1 2 3334333
Q ss_pred Hh-cCCHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 82 VR-SISATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 82 L~-~i~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
+. -+.+++..+|.++++..-++| +.+.++....++++
T Consensus 461 I~~ll~~~~~~~~~~~a~~~a~~f--s~~~v~~~w~~ll~ 498 (500)
T TIGR02918 461 IVEYFNSNDIDAFHEYSYQIAEGF--LTANIIEKWKKLVR 498 (500)
T ss_pred HHHHhChHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHh
Confidence 32 235667889988888765553 34555555555553
No 101
>PRK10125 putative glycosyl transferase; Provisional
Probab=80.93 E-value=5.7 Score=41.46 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=60.6
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcCCHHHHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSISATQVL 91 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i~~~~i~ 91 (430)
+..+.++.+...+.|.-......-+.|||++|| |||.+|---. .|+++ ..-.+.++..|...|.+.+ .++...
T Consensus 299 ~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~--~Eiv~-~~~G~lv~~~d~~~La~~~---~~~~~~ 371 (405)
T PRK10125 299 KLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAA--REVLQ-KSGGKTVSEEEVLQLAQLS---KPEIAQ 371 (405)
T ss_pred HHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCCh--HHhEe-CCcEEEECCCCHHHHHhcc---CHHHHH
Confidence 456778888887777644444578999999995 8888874322 34554 2347788888887776532 222111
Q ss_pred H-H---HHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 92 A-A---RQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 92 ~-m---r~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
+ | .++++.-.++.| +.+.++...+++.+
T Consensus 372 ~~~~~~~~~~r~~~~~~f-s~~~~~~~y~~lY~ 403 (405)
T PRK10125 372 AVFGTTLAEFSQRSRAAY-SGQQMLEEYVNFYQ 403 (405)
T ss_pred HhhhhHHHHHHHHHHHhC-CHHHHHHHHHHHHH
Confidence 1 1 223444344445 45666666666553
No 102
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=80.76 E-value=4 Score=42.78 Aligned_cols=100 Identities=13% Similarity=0.224 Sum_probs=57.8
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC-CCCCC-----ceEEEecccccccHHHHHhcC-
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ-VIDWS-----KAAVWADERLLLQVPDTVRSI- 85 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~-~iDW~-----~~sv~i~~~~l~~l~~~L~~i- 85 (430)
..++++.+.+.+.|.-..+...-.+|||++||.||.-..+ ...+ +.|.. .-.+.++..+..++.+.+..+
T Consensus 364 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g---g~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l 440 (476)
T cd03791 364 AHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG---GLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRAL 440 (476)
T ss_pred HHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC---CccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHH
Confidence 3467889999999975555556789999999998764332 1222 22322 145666666665555555432
Q ss_pred ----CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 86 ----SATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 86 ----~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
.+++..+|++++. +..| +.+.++...+++.
T Consensus 441 ~~~~~~~~~~~~~~~~~---~~~f-sw~~~a~~~~~~y 474 (476)
T cd03791 441 ALYRDPEAWRKLQRNAM---AQDF-SWDRSAKEYLELY 474 (476)
T ss_pred HHHcCHHHHHHHHHHHh---ccCC-ChHHHHHHHHHHH
Confidence 2456666666553 2233 3334444444443
No 103
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=80.66 E-value=4.8 Score=41.23 Aligned_cols=99 Identities=17% Similarity=0.258 Sum_probs=58.7
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCC------CCCCceEEEecccccccHHHHHhcC
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQV------IDWSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~------iDW~~~sv~i~~~~l~~l~~~L~~i 85 (430)
+..++|+.|...+.+.|. .-+.|||++|+ |||+.+. .|-++. ++ ....+.+ .+...+.+.+..+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 578899999999987662 24899999997 7777663 243332 22 3344443 3334444444332
Q ss_pred ---CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHhh
Q psy16950 86 ---SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIRDR 122 (430)
Q Consensus 86 ---~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~~R 122 (430)
.++...+|+++++..-.. .+.+.++..+++.+++|
T Consensus 345 l~~~~~~~~~m~~~~~~~~~~--~a~~~i~~~l~~~~~~~ 382 (382)
T PLN02605 345 FGDKSDELEAMSENALKLARP--EAVFDIVHDLHELVRQR 382 (382)
T ss_pred HcCCHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHhhCC
Confidence 267778888777653211 23345556665555543
No 104
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=79.25 E-value=7.9 Score=45.45 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=63.5
Q ss_pred cEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC--CHHHHHHHHHHHH
Q psy16950 21 TFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SATQVLAARQQTQ 98 (430)
Q Consensus 21 ~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~~i~~mr~~~~ 98 (430)
.||+-..-.++ ..-++|||++|+ |||.++.- ...++|.-..-.+.++..+...|.+.|..+ .++...+|.++++
T Consensus 574 VFV~PS~~EgF-GLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr 649 (1050)
T TIGR02468 574 VFINPAFIEPF-GLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGL 649 (1050)
T ss_pred eeeCCcccCCC-CHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 44443334444 378999999995 99988742 334455444557778887777776666543 4566788988887
Q ss_pred HHHHHHhhhhhHHHHhHHHHHHhhcc
Q psy16950 99 VLWERYFSSIEKIVFTTFEIIRDRLP 124 (430)
Q Consensus 99 ~l~~~yf~s~~~i~~t~l~il~~Ri~ 124 (430)
..-++ | +-+.++...++.+..-..
T Consensus 650 ~~v~~-F-SWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 650 KNIHL-F-SWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred HHHHH-C-CHHHHHHHHHHHHHHHhc
Confidence 65555 4 455666777766665553
No 105
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=77.34 E-value=4.5 Score=40.04 Aligned_cols=83 Identities=12% Similarity=0.113 Sum_probs=50.7
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCC-----CCCCCCceEEEecccc--cccHHHHHhc
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFD-----QVIDWSKAAVWADERL--LLQVPDTVRS 84 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~-----~~iDW~~~sv~i~~~~--l~~l~~~L~~ 84 (430)
++.+.|..+..++.+.| ..-++||+++|+ |||+.+.-.-+-+ +.+.-....+.++..+ ..+|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 78899999999998765 246899999996 7776531000100 1233345566666544 4455444433
Q ss_pred C--CHHHHHHHHHHHHH
Q psy16950 85 I--SATQVLAARQQTQV 99 (430)
Q Consensus 85 i--~~~~i~~mr~~~~~ 99 (430)
+ .++...+|.++++.
T Consensus 318 ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLLDPANLEAMAEAARK 334 (348)
T ss_pred HHcCHHHHHHHHHHHHh
Confidence 2 45667778777754
No 106
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=74.87 E-value=2.3 Score=36.02 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=38.0
Q ss_pred cHHhhhccCcEEEecCCCC-CCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHh
Q psy16950 12 DFQVLLHNSTFCLVPRGRR-LGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVR 83 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~-~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~ 83 (430)
++.+.++++..+++|.-.+ ..+..++|++++||-.|. ++. ++.+.+.-....+.+ ..+..++.+.|+
T Consensus 63 e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~-~~~---~~~~~~~~~~~~~~~-~~~~~~l~~~i~ 130 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIA-SDN---GAEGIVEEDGCGVLV-ANDPEELAEAIE 130 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEE-EHH---HCHCHS---SEEEE--TT-HHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEE-CCc---chhhheeecCCeEEE-CCCHHHHHHHHH
Confidence 6889999999999996322 235799999999985544 554 344433324455555 556666655554
No 107
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=74.27 E-value=3.5 Score=41.34 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=59.1
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCccc-----CCCCCCCCCceEEEecccc--cccHHHHHh
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVL-----PFDQVIDWSKAAVWADERL--LLQVPDTVR 83 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~L-----PF~~~iDW~~~sv~i~~~~--l~~l~~~L~ 83 (430)
.++.+.|..+..+++..| ..-++|||++|+--|.+...... ...+.+--....+.++.++ ...|.+.++
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~ 319 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL 319 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH
Confidence 367789999999998765 24589999999755544321100 0112232245667777666 445555554
Q ss_pred cC--CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 84 SI--SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 84 ~i--~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
.+ .++...+|+++++..-+.+ +.+.++.-.++.+|
T Consensus 320 ~ll~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 356 (357)
T PRK00726 320 ELLSDPERLEAMAEAARALGKPD--AAERLADLIEELAR 356 (357)
T ss_pred HHHcCHHHHHHHHHHHHhcCCcC--HHHHHHHHHHHHhh
Confidence 43 3666788888876542222 23344444444443
No 108
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=74.10 E-value=4.4 Score=37.33 Aligned_cols=170 Identities=13% Similarity=0.085 Sum_probs=86.3
Q ss_pred EEEEec-cchHHHHHHHHHhc-----ccccceEEEEcCCCCCCCCcccccccCCCCCc-c-ccCCCc-cc-ccccccCCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAH-----SQYVSRIIVLWSSPDKPVPAFLSRHNATLPPI-H-ILTHIT-DI-SHRFLHTSL 239 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~-----~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~-~-Vp~~~n-sL-nnRF~p~~~ 239 (430)
|||-+| ..+.|.+.|+++.+ .+.-.||+||=++........+.++....|.. . +..+.| .. ..+-.-...
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~~ 80 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGMLA 80 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHHH
Confidence 467788 44455555655533 22457899986662222111122221223331 2 222222 11 111122234
Q ss_pred CCCceEEEecCCCCCChHHHHHHHHHHHh-CCCCeeecCCcceeccC--CCCCceec--C---------CCCCccccccc
Q psy16950 240 VTTNAVLSLDEDATLNTDEIDFAFHVWKS-FPERIVGYPARSHFWDD--AKNSWGYT--S---------KWTNDYSIVLT 305 (430)
Q Consensus 240 i~T~AVl~~DDDv~~~~~~l~faF~~Wr~-~p~rlVGf~~R~h~~~~--~~~~w~Y~--~---------~~~~~ySmVLt 305 (430)
..+|.|+.+|+|..++.+.|+...+.-.+ ..+-++| .|....+. .+..|... + -....+.-+++
T Consensus 81 a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 158 (211)
T cd04188 81 ARGDYILFADADLATPFEELEKLEEALKTSGYDIAIG--SRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQC 158 (211)
T ss_pred hcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEE--EeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCCccccc
Confidence 56799999999999999999988887443 4455666 34332111 11111110 0 01223344567
Q ss_pred cceEeehhhhhhhcccchHHHHHHhhccCCchhHHHHHHHHhhc
Q psy16950 306 GAAFYHRYYNYLYSHWLSPLLLKTVAQSHNCEDILMNFLVSHVT 349 (430)
Q Consensus 306 ~aaF~Hr~Yl~~Y~~~~p~~ir~~VD~~~NCEDIaMNflVs~~T 349 (430)
++.++.|..+..... ..+...-++|+-|.+.+...-
T Consensus 159 g~~~~~r~~~~~~~~--------~~~~~~~~~d~el~~r~~~~g 194 (211)
T cd04188 159 GFKLFTRDAARRLFP--------RLHLERWAFDVELLVLARRLG 194 (211)
T ss_pred CceeEcHHHHHHHHh--------hhhccceEeeHHHHHHHHHcC
Confidence 777888766543321 112234467888887777643
No 109
>PLN02316 synthase/transferase
Probab=73.94 E-value=16 Score=43.07 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=30.8
Q ss_pred hhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeC
Q psy16950 15 VLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSN 51 (430)
Q Consensus 15 ~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d 51 (430)
.+++.|.+.|+|.=.-+...-.+|||++||+||+-..
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~v 951 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKT 951 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcC
Confidence 5789999999997555555789999999999999544
No 110
>PLN00142 sucrose synthase
Probab=73.54 E-value=14 Score=42.33 Aligned_cols=95 Identities=6% Similarity=-0.062 Sum_probs=54.9
Q ss_pred cEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc------CCHHHHHHHH
Q psy16950 21 TFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS------ISATQVLAAR 94 (430)
Q Consensus 21 ~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~------i~~~~i~~mr 94 (430)
..+++|.-......-++|||++|+ |||.++.--+ .+.|.=..-.+.++..+...+.+.|.. -.++...+|.
T Consensus 668 DVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg 744 (815)
T PLN00142 668 GAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKIS 744 (815)
T ss_pred CEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 344555332223478999999997 7777763222 233433455677777776665554432 2567778888
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 95 QQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 95 ~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
++++.--...| +.+.++..++++.
T Consensus 745 ~~Ar~rv~e~F-SWe~~A~rll~L~ 768 (815)
T PLN00142 745 DAGLQRIYECY-TWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHH
Confidence 77755433333 3445555555555
No 111
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=69.83 E-value=8.7 Score=39.18 Aligned_cols=39 Identities=21% Similarity=0.390 Sum_probs=28.6
Q ss_pred cHHhhhccCcEEEecCCCC-----CCcchHHHHHhhCceeeEeeC
Q psy16950 12 DFQVLLHNSTFCLVPRGRR-----LGSFRFLETLQAGCIPVILSN 51 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~-----~~s~Rl~eal~~GCIPVii~d 51 (430)
+..+.++.+..|++|--.. .....++|+|++|+ |||.++
T Consensus 266 ~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 266 ELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 4667889999999995322 11257999999996 777554
No 112
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=68.02 E-value=10 Score=39.08 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=59.1
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCC-----CCceEEEecccccccHHHHHhcC
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVID-----WSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iD-----W~~~sv~i~~~~l~~l~~~L~~i 85 (430)
.+..+.|+.|.+++..+|. .-+.||+++|+ |||+.+. .|-++..+ =..+++... +..++.+.|..+
T Consensus 265 ~~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~--~pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~l 335 (391)
T PRK13608 265 KHMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNP--APGQELENALYFEEKGFGKIAD--TPEEAIKIVASL 335 (391)
T ss_pred chHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCC--CCCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHH
Confidence 3566889999999885442 35899999985 8888763 24333221 122343332 333344444332
Q ss_pred --CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q psy16950 86 --SATQVLAARQQTQVLWERYFSSIEKIVFTTFEIIR 120 (430)
Q Consensus 86 --~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il~ 120 (430)
.++...+|+++++.+-+. + +.+.++...++.+.
T Consensus 336 l~~~~~~~~m~~~~~~~~~~-~-s~~~i~~~l~~l~~ 370 (391)
T PRK13608 336 TNGNEQLTNMISTMEQDKIK-Y-ATQTICRDLLDLIG 370 (391)
T ss_pred hcCHHHHHHHHHHHHHhcCC-C-CHHHHHHHHHHHhh
Confidence 567888999888876443 2 34555666655554
No 113
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=67.85 E-value=15 Score=37.05 Aligned_cols=116 Identities=12% Similarity=0.078 Sum_probs=65.3
Q ss_pred CCceEEEEEec-cchHHHHHHHHHhcc---cccceEEEEcCCCCCCCCcccccccCCC-CCcc-cc-CCCc--ccccccc
Q psy16950 165 SEQFTAIIYAQ-LGTSLYKVIRNVAHS---QYVSRIIVLWSSPDKPVPAFLSRHNATL-PPIH-IL-THIT--DISHRFL 235 (430)
Q Consensus 165 ~~~fTvvi~ty-r~~~L~~~l~~l~~~---~~l~~IvVvWn~~~~~~P~~l~~~~~~~-p~~~-Vp-~~~n--sLnnRF~ 235 (430)
....+|||-+| ....|.+.|+.+.+. +...+|+||=++........+.++.... +... ++ ...| .-.+...
T Consensus 30 ~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~A~~~ 109 (306)
T PRK13915 30 GRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKGEALWR 109 (306)
T ss_pred CCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHHHHHHH
Confidence 45799999999 556677777776542 3457999987762211111111111110 0000 10 0111 0011111
Q ss_pred cCCCCCCceEEEecCCCC-CChHHHHHHHHHHHhCCC--CeeecCCcc
Q psy16950 236 HTSLVTTNAVLSLDEDAT-LNTDEIDFAFHVWKSFPE--RIVGYPARS 280 (430)
Q Consensus 236 p~~~i~T~AVl~~DDDv~-~~~~~l~faF~~Wr~~p~--rlVGf~~R~ 280 (430)
-...-+.|.|+.+|.|.. ++++.|+...+....+|+ -+.|++.|.
T Consensus 110 g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~ 157 (306)
T PRK13915 110 SLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRP 157 (306)
T ss_pred HHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccc
Confidence 123456899999999985 899999988887766664 355766664
No 114
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=65.52 E-value=28 Score=32.27 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=28.6
Q ss_pred cHHhhhccCcEEEecCCC-CCCcchHHHHHhhCceeeEeeCC
Q psy16950 12 DFQVLLHNSTFCLVPRGR-RLGSFRFLETLQAGCIPVILSNG 52 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GCIPVii~d~ 52 (430)
+..+.++.+...+.|.-. +.+ .-+.||+++| +|||.++.
T Consensus 269 ~~~~~~~~~~~~v~ps~~e~~~-~~~~Ea~a~g-~pvi~~~~ 308 (381)
T COG0438 269 ELAELLASADVFVLPSLSEGFG-LVLLEAMAAG-TPVIASDV 308 (381)
T ss_pred HHHHHHHhCCEEEeccccccch-HHHHHHHhcC-CcEEECCC
Confidence 455567778899998432 333 3499999999 99988764
No 115
>KOG1387|consensus
Probab=64.32 E-value=16 Score=38.07 Aligned_cols=90 Identities=17% Similarity=0.233 Sum_probs=55.9
Q ss_pred HHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCC-CCCCCCCceEE-EecccccccHHHHHhc--CCHH
Q psy16950 13 FQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPF-DQVIDWSKAAV-WADERLLLQVPDTVRS--ISAT 88 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF-~~~iDW~~~sv-~i~~~~l~~l~~~L~~--i~~~ 88 (430)
-.+++.++++.+.-.=+...-....|+|++|.|||.=..+ =|- +=+++|.--.. +..+.+.+-...+|+. .+.+
T Consensus 350 lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~Sg--GP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~ 427 (465)
T KOG1387|consen 350 LVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSG--GPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYD 427 (465)
T ss_pred HHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCC--CCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHH
Confidence 4467889999887655544457899999999999985442 132 22555654332 3334333334444433 2566
Q ss_pred HHHHHHHHHHHHHHHH
Q psy16950 89 QVLAARQQTQVLWERY 104 (430)
Q Consensus 89 ~i~~mr~~~~~l~~~y 104 (430)
+...||+.+|.--.++
T Consensus 428 ~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 428 ERNMMRRNARKSLARF 443 (465)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6889998887654443
No 116
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=61.61 E-value=16 Score=35.84 Aligned_cols=71 Identities=14% Similarity=0.038 Sum_probs=43.8
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI 85 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i 85 (430)
.+-.+.+++|.++++|.-......-++|||++||-. |.++.- +..+.+.= .........+..++.+.+..+
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~~~--~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l 328 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSDTI--TKEVDLTD-LVKFLSLDESPEIWAEEILKL 328 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEcCC--chhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence 356778999999999975544567899999999855 445532 22333322 334444444445555555443
No 117
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=61.25 E-value=34 Score=38.68 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=59.4
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEeccccc------ccHHHHHhcC
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLL------LQVPDTVRSI 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l------~~l~~~L~~i 85 (430)
+..+.++.+...+.|.-......-++|||++|| |||.++.-- ..++|.=..-.+.++..+. ..|.+++...
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG--~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGG--AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCC--hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 456778888877777433333578999999995 888777422 2334433444666665443 2344444433
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 86 SATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 86 ~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
.. -.+|+++++..-+.-| |.+.++..++++.
T Consensus 661 ~~--~~~l~~~ar~~a~~~F-S~~~~~~~~~~lY 691 (694)
T PRK15179 661 AA--DPGIARKAADWASARF-SLNQMIASTVRCY 691 (694)
T ss_pred hc--cHHHHHHHHHHHHHhC-CHHHHHHHHHHHh
Confidence 22 2356666665555555 4556666666654
No 118
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=60.44 E-value=36 Score=33.76 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=65.4
Q ss_pred CceEEEEEec-cchHHHHHHHHHhcccccceEEE-EcCCCCCCCCcccccccCC-CCCcccc-CCCc----ccccccccC
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHSQYVSRIIV-LWSSPDKPVPAFLSRHNAT-LPPIHIL-THIT----DISHRFLHT 237 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~~~l~~IvV-vWn~~~~~~P~~l~~~~~~-~p~~~Vp-~~~n----sLnnRF~p~ 237 (430)
...+++|.|| +.+.|.+.|..+.+.....+++| |=|+ .. +.....+... .|.+.+- ...| .=+|+-.-.
T Consensus 3 ~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~-s~--d~~~~~~~~~~~~~v~~i~~~~NlG~agg~n~g~~~ 79 (305)
T COG1216 3 PKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNG-ST--DGSLEALKARFFPNVRLIENGENLGFAGGFNRGIKY 79 (305)
T ss_pred cceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCC-CC--CCCHHHHHhhcCCcEEEEEcCCCccchhhhhHHHHH
Confidence 4578999999 88889999999888777666665 4333 21 1121112222 3443322 3333 111211111
Q ss_pred CCCCCc-eEEEecCCCCCChHHHHHHHHHHHhCCCC-eeec
Q psy16950 238 SLVTTN-AVLSLDEDATLNTDEIDFAFHVWKSFPER-IVGY 276 (430)
Q Consensus 238 ~~i~T~-AVl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf 276 (430)
..=+.+ .|+.+++|+.+.++.|+--.+.=.+.|+- +||.
T Consensus 80 a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~ 120 (305)
T COG1216 80 ALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGP 120 (305)
T ss_pred HhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeee
Confidence 111112 79999999999999999999999988776 4443
No 119
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=59.46 E-value=17 Score=36.59 Aligned_cols=104 Identities=12% Similarity=0.124 Sum_probs=55.2
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC----CCCCCce------------E--EEeccc
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ----VIDWSKA------------A--VWADER 73 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~----~iDW~~~------------s--v~i~~~ 73 (430)
+-.+.++.|..++++.|. -..||+.+|| |||+.... -||.. .+....+ + +..++.
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA 326 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC
Confidence 457788999999998653 2359999997 77766432 12221 0001111 1 111222
Q ss_pred ccccHHHHHhcC--CHHHHHHHHHHHHHHHHHH-hhhhhHHHHhHHHHHHhh
Q psy16950 74 LLLQVPDTVRSI--SATQVLAARQQTQVLWERY-FSSIEKIVFTTFEIIRDR 122 (430)
Q Consensus 74 ~l~~l~~~L~~i--~~~~i~~mr~~~~~l~~~y-f~s~~~i~~t~l~il~~R 122 (430)
+..++.+.+..+ .++...+|.++.+.+.+.. -...+.++..+++.+++|
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~ 378 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQQLRCGADERAAQAVLELLKQR 378 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhc
Confidence 333444444332 4666778888776655543 233445555555555544
No 120
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=58.79 E-value=22 Score=36.52 Aligned_cols=104 Identities=15% Similarity=0.201 Sum_probs=68.0
Q ss_pred CceEEEEEec--cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcccccccCCC-CCccc----c---CCCccccccc
Q psy16950 166 EQFTAIIYAQ--LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAFLSRHNATL-PPIHI----L---THITDISHRF 234 (430)
Q Consensus 166 ~~fTvvi~ty--r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~l~~~~~~~-p~~~V----p---~~~nsLnnRF 234 (430)
.+.+++|-+| ..+.+.+.+.++.+..+= .+|+||=.+...+....+.++.... |.+.+ . .+.+.+|+-+
T Consensus 54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al~~~l 133 (439)
T COG1215 54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGALNNGL 133 (439)
T ss_pred CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHHHHHHH
Confidence 5678999999 344678888888777654 4888887763333332233333333 34333 1 3445566555
Q ss_pred ccCCCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCC
Q psy16950 235 LHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPER 272 (430)
Q Consensus 235 ~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~r 272 (430)
.- -++|.|+.+|-|..+..+.|..+..-+...+.-
T Consensus 134 ~~---~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~ 168 (439)
T COG1215 134 KR---AKGDVVVILDADTVPEPDALRELVSPFEDPPVG 168 (439)
T ss_pred hh---cCCCEEEEEcCCCCCChhHHHHHHhhhcCCCee
Confidence 44 349999999999999999998776655555554
No 121
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=58.73 E-value=43 Score=35.73 Aligned_cols=82 Identities=15% Similarity=0.106 Sum_probs=52.5
Q ss_pred ccHHhhhccCcEEEecC-CCCCCcchHHHHHhhCcee----eEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc-
Q psy16950 11 YDFQVLLHNSTFCLVPR-GRRLGSFRFLETLQAGCIP----VILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS- 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~-G~~~~s~Rl~eal~~GCIP----Vii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~- 84 (430)
.+..++++.+.-|++|. .+|. ..-..|||++|+ | ||+++.--.+ +.+. -++.++..+..++.+.|..
T Consensus 347 ~el~aly~aaDv~vv~S~~EG~-~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 347 EELMALYRAADVGLVTPLRDGM-NLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHhCcEEEECcccccc-CccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 35667789999999875 4444 367999999996 8 8888743211 1222 3677788777776665533
Q ss_pred --CCHHHHHHHHHHHHH
Q psy16950 85 --ISATQVLAARQQTQV 99 (430)
Q Consensus 85 --i~~~~i~~mr~~~~~ 99 (430)
.+.++..++.++++.
T Consensus 420 L~~~~~er~~r~~~~~~ 436 (456)
T TIGR02400 420 LTMPLEEREERHRAMMD 436 (456)
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 355555555444443
No 122
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=58.68 E-value=28 Score=32.35 Aligned_cols=105 Identities=12% Similarity=0.098 Sum_probs=57.0
Q ss_pred EEEEEec-cc-hHHHHHHHHHhcccc-cceEEEEcCCCCCCCCc--ccccccCCCC-Ccc-ccCCC-cc--cccccccCC
Q psy16950 169 TAIIYAQ-LG-TSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPA--FLSRHNATLP-PIH-ILTHI-TD--ISHRFLHTS 238 (430)
Q Consensus 169 Tvvi~ty-r~-~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~--~l~~~~~~~p-~~~-Vp~~~-ns--LnnRF~p~~ 238 (430)
++||-+| .. +.|.+.|.++.+..+ --+|+||=|+ ...... .+.++....+ .+. +.... .. -.++-.-..
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~-s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~~ 79 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNN-TKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALE 79 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCC-CCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHHH
Confidence 5889999 43 567788888866543 3588888666 222111 0111111111 222 11111 11 111111112
Q ss_pred CC--CCceEEEecCCCCCChHHHHHHHHHHHhCCC-Ceee
Q psy16950 239 LV--TTNAVLSLDEDATLNTDEIDFAFHVWKSFPE-RIVG 275 (430)
Q Consensus 239 ~i--~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~-rlVG 275 (430)
.. .+|.|+.+|+|..++++.|+......+ +|+ -+|+
T Consensus 80 ~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~ 118 (236)
T cd06435 80 RTAPDAEIIAVIDADYQVEPDWLKRLVPIFD-DPRVGFVQ 118 (236)
T ss_pred hcCCCCCEEEEEcCCCCcCHHHHHHHHHHhc-CCCeeEEe
Confidence 22 379999999999999999998887664 443 3454
No 123
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=58.14 E-value=20 Score=31.58 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=50.9
Q ss_pred EEEEec-cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcc-cccccCCCCC--cccc-CCCc-cc-ccccccCCCCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAF-LSRHNATLPP--IHIL-THIT-DI-SHRFLHTSLVT 241 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~-l~~~~~~~p~--~~Vp-~~~n-sL-nnRF~p~~~i~ 241 (430)
+||.+| +...|.+.|.++.+.... -||+|| ++........ +.++....+. ..+. ...+ .. .++-.-....+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivv-dd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a~ 79 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVIIA-DDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAAK 79 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEEE-eCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHhc
Confidence 578888 777888889888664433 466655 5512111001 1111111111 1111 1111 00 01111223467
Q ss_pred CceEEEecCCCCCChHHHHHHHHHH
Q psy16950 242 TNAVLSLDEDATLNTDEIDFAFHVW 266 (430)
Q Consensus 242 T~AVl~~DDDv~~~~~~l~faF~~W 266 (430)
++-|+.+|+|..++.+-|+...+..
T Consensus 80 g~~i~~lD~D~~~~~~~l~~~~~~~ 104 (182)
T cd06420 80 GDYLIFIDGDCIPHPDFIADHIELA 104 (182)
T ss_pred CCEEEEEcCCcccCHHHHHHHHHHh
Confidence 8999999999999998888776654
No 124
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=57.85 E-value=21 Score=38.00 Aligned_cols=85 Identities=13% Similarity=0.031 Sum_probs=54.0
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCce---eeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc---
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCI---PVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS--- 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCI---PVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~--- 84 (430)
.+..+.++.|.-++.|.-......-..|||++||= |||+++.--.+-. ..-.+.++..+..++.+.|..
T Consensus 352 ~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l~ 426 (460)
T cd03788 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRALT 426 (460)
T ss_pred HHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHHc
Confidence 35667788888888875332223678999999996 6999874221111 123677777777776665543
Q ss_pred CCHHHHHHHHHHHHHH
Q psy16950 85 ISATQVLAARQQTQVL 100 (430)
Q Consensus 85 i~~~~i~~mr~~~~~l 100 (430)
.++++..+|.++++..
T Consensus 427 ~~~~e~~~~~~~~~~~ 442 (460)
T cd03788 427 MPLEERRERHRKLREY 442 (460)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3566666666655544
No 125
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=57.76 E-value=43 Score=38.44 Aligned_cols=102 Identities=8% Similarity=-0.046 Sum_probs=58.1
Q ss_pred cEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhcC------CHHHHHHHH
Q psy16950 21 TFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI------SATQVLAAR 94 (430)
Q Consensus 21 ~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i------~~~~i~~mr 94 (430)
..+++|.=.-+.-.-++|||++|+-. |.++.=-+ .+.|.=..-.+.++..+...+.+.|..+ .++...+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlPV-VAT~~GG~--~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLPT-FATRFGGP--LEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCCE-EEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 45556643333447899999999855 44542111 2233324556777877777666655432 567778888
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHHHHHhhccccccCCCCCCC
Q psy16950 95 QQTQVLWERYFSSIEKIVFTTFEIIRDRLPRQKTKTGLTWN 135 (430)
Q Consensus 95 ~~~~~l~~~yf~s~~~i~~t~l~il~~Ri~~~~~~~~~~WN 135 (430)
++++.--...| +-+.++..++++. .-|.+||
T Consensus 722 ~~a~~rV~~~F-SW~~~A~~ll~l~---------~~~~~~~ 752 (784)
T TIGR02470 722 QGGLQRIYEKY-TWKIYSERLLTLA---------GIYGFWK 752 (784)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHH---------hhhhHhh
Confidence 87754322233 2334444454443 4466776
No 126
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=56.62 E-value=18 Score=32.50 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=57.0
Q ss_pred EEEEec-cchHHHHHHHHHhcccc---cceEEEEcCCCCCCCCcccccccCCCCC-ccc-cCCC-----cccccccccCC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQY---VSRIIVLWSSPDKPVPAFLSRHNATLPP-IHI-LTHI-----TDISHRFLHTS 238 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~---l~~IvVvWn~~~~~~P~~l~~~~~~~p~-~~V-p~~~-----nsLnnRF~p~~ 238 (430)
|||-+| ..+.|.+.|+++.+... .-+|+||=++ .. ......... ... +.+ .... ..+|.=+.-..
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~-s~--D~t~~~~~~-~~~~~~~~~~~~~~gk~~aln~g~~~a~ 76 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADN-CT--DDTAQVARA-AGATVLERHDPERRGKGYALDFGFRHLL 76 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCC-CC--chHHHHHHH-cCCeEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 578888 55667778888755332 3578777444 21 112111100 111 111 1111 12221111110
Q ss_pred --CCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeee
Q psy16950 239 --LVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVG 275 (430)
Q Consensus 239 --~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVG 275 (430)
.-+.|.|+.+|.|..++++.|+...+.....++-+.|
T Consensus 77 ~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~~~~v~g 115 (183)
T cd06438 77 NLADDPDAVVVFDADNLVDPNALEELNARFAAGARVVQA 115 (183)
T ss_pred hcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhCCCeeEE
Confidence 2358899999999999999999988888777765555
No 127
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=55.09 E-value=27 Score=29.38 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=54.6
Q ss_pred CceEEEEEec-cchHHHHHHHHHhccccc-ceEEEEcCCCCCCCCcccccccCCCCCcccc-CC--CcccccccccCCCC
Q psy16950 166 EQFTAIIYAQ-LGTSLYKVIRNVAHSQYV-SRIIVLWSSPDKPVPAFLSRHNATLPPIHIL-TH--ITDISHRFLHTSLV 240 (430)
Q Consensus 166 ~~fTvvi~ty-r~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp-~~--~nsLnnRF~p~~~i 240 (430)
.+++++|-|| +...|.+.|+++.+-..- .||+||=++........+.++....+..... .. .+--.+|-.-....
T Consensus 3 ~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (291)
T COG0463 3 PKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNAGLEYA 82 (291)
T ss_pred ccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHhhHHhc
Confidence 5789999999 777788888887655444 3777776662222122222221111111111 11 11111222222334
Q ss_pred CCceEEEecCCCCCChHHHHHHHHHHH
Q psy16950 241 TTNAVLSLDEDATLNTDEIDFAFHVWK 267 (430)
Q Consensus 241 ~T~AVl~~DDDv~~~~~~l~faF~~Wr 267 (430)
..+.|+.+|+|.. ..+.+...+....
T Consensus 83 ~~~~~~~~d~d~~-~~~~~~~~~~~~~ 108 (291)
T COG0463 83 RGDYIVFLDADDQ-HPPELIPLVAAGG 108 (291)
T ss_pred cCCEEEEEccCCC-CCHHHHHHHHHhh
Confidence 4499999999988 7777665444443
No 128
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=54.47 E-value=21 Score=35.14 Aligned_cols=110 Identities=17% Similarity=0.162 Sum_probs=59.9
Q ss_pred EEEEEec-cc------hHHHHHHHHHhc--ccccceEEEEcCCCCCCCCcccccccCCCCCc-ccc-CCC----cccccc
Q psy16950 169 TAIIYAQ-LG------TSLYKVIRNVAH--SQYVSRIIVLWSSPDKPVPAFLSRHNATLPPI-HIL-THI----TDISHR 233 (430)
Q Consensus 169 Tvvi~ty-r~------~~L~~~l~~l~~--~~~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~-~Vp-~~~----nsLnnR 233 (430)
||||-.+ +. +.|...|..+.. .+.--+||||-++....--..+.++....... -|. ... +-=-.|
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~ar 80 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAKAR 80 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCHHHHH
Confidence 6788888 33 234333555544 35567999999983211001122211111111 112 111 101111
Q ss_pred cccCCCCCCceEEEecCCCCCChHHHHHHHH---HHHhCCCCeeecCC
Q psy16950 234 FLHTSLVTTNAVLSLDEDATLNTDEIDFAFH---VWKSFPERIVGYPA 278 (430)
Q Consensus 234 F~p~~~i~T~AVl~~DDDv~~~~~~l~faF~---~Wr~~p~rlVGf~~ 278 (430)
=.-...-++|-|+.+|-|+.++++-|+-+.+ .=.+.+..++.++.
T Consensus 81 N~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~ 128 (281)
T PF10111_consen 81 NIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPC 128 (281)
T ss_pred HHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 1222346899999999999999999999988 23356767666654
No 129
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=50.34 E-value=21 Score=31.90 Aligned_cols=40 Identities=23% Similarity=0.251 Sum_probs=30.1
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCC
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNG 52 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~ 52 (430)
.+...+..|..+++|......+..++|||++||- ||.++.
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~p-vi~s~~ 213 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLP-VIATDV 213 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCC-EEEcCC
Confidence 4455666699999998766667899999999875 455553
No 130
>COG3062 NapD Uncharacterized protein involved in formation of periplasmic nitrate reductase [Inorganic ion transport and metabolism]
Probab=48.58 E-value=42 Score=28.21 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=44.4
Q ss_pred CCCCccccCCCCCCCceEEEEEeccchHHHHHHHHHhcccccceEEEEcCCCC
Q psy16950 152 ADYPFYASFEPNASEQFTAIIYAQLGTSLYKVIRNVAHSQYVSRIIVLWSSPD 204 (430)
Q Consensus 152 ~~~P~~~~~~~~~~~~fTvvi~tyr~~~L~~~l~~l~~~~~l~~IvVvWn~~~ 204 (430)
...|++.-++..+..|+-+||.+-+.+.|...+.++.+.|.|-.+..|....+
T Consensus 28 ~~ip~~EV~~~d~~GKlVVVie~~~~~~l~~tie~i~nl~gVlav~lVyhqqd 80 (94)
T COG3062 28 LAIPGCEVYGEDAEGKLVVVIEAEDSETLLETIESIRNLPGVLAVSLVYHQQD 80 (94)
T ss_pred hcCCCcEeeccCCCceEEEEEEcCchHHHHHHHHHHhcCCceeEEEEEEEEEe
Confidence 34566655566777899999999999999999999999999999999988743
No 131
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=47.67 E-value=40 Score=33.32 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=51.7
Q ss_pred ccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCC-c------ccCCCCCCCCCceEEEeccc--ccccHHHH
Q psy16950 11 YDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNG-W------VLPFDQVIDWSKAAVWADER--LLLQVPDT 81 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~-~------~LPF~~~iDW~~~sv~i~~~--~l~~l~~~ 81 (430)
.++.+.|..+...+++.|. .-++|||.+|+ |||+.+. . ..+.+.+.+ ....+.++.. +..++.+.
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHH
Confidence 4677889999999987662 35899999997 4555431 1 011122222 4556666654 55555555
Q ss_pred HhcC--CHHHHHHHHHHHHHH
Q psy16950 82 VRSI--SATQVLAARQQTQVL 100 (430)
Q Consensus 82 L~~i--~~~~i~~mr~~~~~l 100 (430)
|+.+ .++...+|+++++..
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 318 LLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHhc
Confidence 5443 466777888777643
No 132
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=47.17 E-value=1.4e+02 Score=29.33 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=64.9
Q ss_pred hccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC-CCCCCceEE-Eecccc--cccHHHHHhcCCHHHHHH
Q psy16950 17 LHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ-VIDWSKAAV-WADERL--LLQVPDTVRSISATQVLA 92 (430)
Q Consensus 17 l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~-~iDW~~~sv-~i~~~~--l~~l~~~L~~i~~~~i~~ 92 (430)
..+-+|=+...|.+. |.||.--|.+|++++.....+.-=|.+ ...|.-+.= .-+-++ +.+..+.+++ .+++.++
T Consensus 143 ~~~yKyli~~dG~~~-S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~-~~~~a~~ 220 (256)
T smart00672 143 QCKHKYKINIEGVAW-SVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNE-HDKKAQE 220 (256)
T ss_pred HhhcceEEecCCccc-hhhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHh-CHHHHHH
Confidence 356799999999986 689999999999999988654333333 334554431 111223 6666666655 5677788
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 93 ARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 93 mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
+-++++...++|++ .+++.......|
T Consensus 221 Ia~~~~~~~~~~L~-~~~~~~Y~~~ll 246 (256)
T smart00672 221 IGKRGSEFIQQNLS-MEDVYDYMFHLL 246 (256)
T ss_pred HHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 88888888888874 344444444433
No 133
>KOG3738|consensus
Probab=46.20 E-value=50 Score=35.02 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=73.4
Q ss_pred ceEEEEEec---cchHHHHHHHH-Hhccc--ccceEEEEcCCCCCCCCcccccccCCCCCcccc---CCCcccccccccC
Q psy16950 167 QFTAIIYAQ---LGTSLYKVIRN-VAHSQ--YVSRIIVLWSSPDKPVPAFLSRHNATLPPIHIL---THITDISHRFLHT 237 (430)
Q Consensus 167 ~fTvvi~ty---r~~~L~~~l~~-l~~~~--~l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~Vp---~~~nsLnnRF~p~ 237 (430)
.-|-||-|| .+..|++.|.+ +.++| .++|||+|=.. .. .|+....+ .+||++++- ....-+-.|-+=-
T Consensus 124 p~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~-S~-Dped~~~L-~ri~kvr~LRN~~ReGLirSRvrGA 200 (559)
T KOG3738|consen 124 PPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDF-SQ-DPEDGKLL-KRIPKVRVLRNNEREGLIRSRVRGA 200 (559)
T ss_pred CCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCC-CC-ChHHHHHH-hhhheeeeecccchhhhhhhhcccc
Confidence 346677777 56678887766 57777 59999999766 33 34442222 237776554 2333455666655
Q ss_pred CCCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeee
Q psy16950 238 SLVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVG 275 (430)
Q Consensus 238 ~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVG 275 (430)
+.-....+.++|-...++.+=|+=..+-=.+++.|+|.
T Consensus 201 dvA~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVs 238 (559)
T KOG3738|consen 201 DVAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVS 238 (559)
T ss_pred ccccceEEEEEecceeecchhhHHHHHHHhhcccceee
Confidence 55566677888989999999899888888999999886
No 134
>PRK10018 putative glycosyl transferase; Provisional
Probab=41.96 E-value=56 Score=32.45 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=62.7
Q ss_pred ceEEEEEec-cchHHHHHHHHHhcccc-cceEEEEcCCCCCCCCcccccccC--CCCCcccc-CCCc-cc-ccccccCCC
Q psy16950 167 QFTAIIYAQ-LGTSLYKVIRNVAHSQY-VSRIIVLWSSPDKPVPAFLSRHNA--TLPPIHIL-THIT-DI-SHRFLHTSL 239 (430)
Q Consensus 167 ~fTvvi~ty-r~~~L~~~l~~l~~~~~-l~~IvVvWn~~~~~~P~~l~~~~~--~~p~~~Vp-~~~n-sL-nnRF~p~~~ 239 (430)
..||||-|| +...|.+.|.++.+-.+ --||+||=++ .. ....+.++.. ..+.+.+- .+.| .. ..|-.-...
T Consensus 6 ~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDg-S~-~~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~gi~~ 83 (279)
T PRK10018 6 LISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDC-ST-SWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIML 83 (279)
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECC-CC-CHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 589999999 66667778877643222 2488888665 32 1122222111 12333322 3322 11 223334455
Q ss_pred CCCceEEEecCCCCCChHHHHHHHHHHHhCCC
Q psy16950 240 VTTNAVLSLDEDATLNTDEIDFAFHVWKSFPE 271 (430)
Q Consensus 240 i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~ 271 (430)
.+++.|+.+|+|-.+.++.|+...+.+.+.+.
T Consensus 84 a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~ 115 (279)
T PRK10018 84 AQGEYITGIDDDDEWTPNRLSVFLAHKQQLVT 115 (279)
T ss_pred cCCCEEEEECCCCCCCccHHHHHHHHHHhCCC
Confidence 78999999999999999999988888876543
No 135
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=41.83 E-value=76 Score=32.25 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=60.0
Q ss_pred CCCCCceEEEEEec-cchHHHHHHHHHhcc---------cccceEEEEcCCCCCCCCcccccccCCC--C--Ccccc-CC
Q psy16950 162 PNASEQFTAIIYAQ-LGTSLYKVIRNVAHS---------QYVSRIIVLWSSPDKPVPAFLSRHNATL--P--PIHIL-TH 226 (430)
Q Consensus 162 ~~~~~~fTvvi~ty-r~~~L~~~l~~l~~~---------~~l~~IvVvWn~~~~~~P~~l~~~~~~~--p--~~~Vp-~~ 226 (430)
..++...++||-+| ....|.+.|+.+.++ ..--||+||=++....-.+.+.++.... | .+.+- .+
T Consensus 66 ~~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 66 KDSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcC
Confidence 35677899999999 455566666554321 2246899996652111111111111111 1 12221 22
Q ss_pred Cc-----ccccccccCCCCCCceEEEecCCCCCChHHHHHHHHHHHh
Q psy16950 227 IT-----DISHRFLHTSLVTTNAVLSLDEDATLNTDEIDFAFHVWKS 268 (430)
Q Consensus 227 ~n-----sLnnRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~ 268 (430)
.| .+|.=+ ..-+.|-|+.+|.|...+.++++...+..++
T Consensus 146 ~N~G~~~A~~~Gi---~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 146 RNKGKGGAVRIGM---LASRGKYILMVDADGATDIDDFDKLEDIMLK 189 (333)
T ss_pred CCCChHHHHHHHH---HHccCCEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 22 222111 2346799999999999999999999998876
No 136
>KOG2619|consensus
Probab=38.58 E-value=30 Score=36.20 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=49.0
Q ss_pred HHhhhccCcEEEecCCCCC---CcchHHHHHhhCceeeEeeCCcccCCCCCCCCCceEEEecc-cccccHHHHHhcCCHH
Q psy16950 13 FQVLLHNSTFCLVPRGRRL---GSFRFLETLQAGCIPVILSNGWVLPFDQVIDWSKAAVWADE-RLLLQVPDTVRSISAT 88 (430)
Q Consensus 13 y~~~l~~S~FCL~p~G~~~---~s~Rl~eal~~GCIPVii~d~~~LPF~~~iDW~~~sv~i~~-~~l~~l~~~L~~i~~~ 88 (430)
-.+.+..=+|-|+-.-..- -+--|+-|+.+|.|||+++......|- . .+..|.|+. ..+.++...|+.+.++
T Consensus 244 ~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~fv---P-~~SfI~vdDF~s~~ela~ylk~L~~n 319 (372)
T KOG2619|consen 244 LLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENFV---P-PDSFIHVDDFQSPQELAAYLKKLDKN 319 (372)
T ss_pred ceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCccccccC---C-CcceEehhhcCCHHHHHHHHHHhhcC
Confidence 3445666777777644321 245788999999999999985443333 2 444555544 4556677888777665
Q ss_pred HHHHH
Q psy16950 89 QVLAA 93 (430)
Q Consensus 89 ~i~~m 93 (430)
+.+-+
T Consensus 320 ~~~Y~ 324 (372)
T KOG2619|consen 320 PAAYL 324 (372)
T ss_pred HHHHH
Confidence 55444
No 137
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=38.13 E-value=66 Score=32.56 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=54.1
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC-----CCCCCceEEEecccccccHHHHHhcC-
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ-----VIDWSKAAVWADERLLLQVPDTVRSI- 85 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~-----~iDW~~~sv~i~~~~l~~l~~~L~~i- 85 (430)
+..++|+.|...+...| ..-+.||+++|+ |||+.+. .|-.+ .+.-..+.+.. .+..++.+.+..+
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~--~~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKP--VPGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCC--CCCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHH
Confidence 45688899986655333 245899999997 5777553 12111 11112334433 3334444444433
Q ss_pred -CHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHH
Q psy16950 86 -SATQVLAARQQTQVLWERYFSSIEKIVFTTFEII 119 (430)
Q Consensus 86 -~~~~i~~mr~~~~~l~~~yf~s~~~i~~t~l~il 119 (430)
.++...+|+++++.+.+.+ +.++++..+++.+
T Consensus 337 ~~~~~~~~m~~~~~~~~~~~--s~~~i~~~i~~~~ 369 (380)
T PRK13609 337 QDDMKLLQMKEAMKSLYLPE--PADHIVDDILAEN 369 (380)
T ss_pred CCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHHhh
Confidence 4677888888877654443 4555555555443
No 138
>KOG3185|consensus
Probab=34.27 E-value=29 Score=33.03 Aligned_cols=33 Identities=24% Similarity=0.499 Sum_probs=28.1
Q ss_pred cCcEEEecCCCCCCcchHHHHHhhCceeeEeeC
Q psy16950 19 NSTFCLVPRGRRLGSFRFLETLQAGCIPVILSN 51 (430)
Q Consensus 19 ~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d 51 (430)
..+|||+..|.+..-...|||=..+.|||+-..
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~ts 52 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHTS 52 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEee
Confidence 458999999988877889999999999998543
No 139
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=31.41 E-value=79 Score=30.09 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=34.5
Q ss_pred CCCCceEEEecCCCCCChHHHHHHHHHHHhCCCCeeecCCcceecc
Q psy16950 239 LVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPERIVGYPARSHFWD 284 (430)
Q Consensus 239 ~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~rlVGf~~R~h~~~ 284 (430)
.-++|.|+.+|.|..++.+.|+...+...++|+ +.|..++.+..+
T Consensus 71 ~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~-vg~v~g~~~~~~ 115 (244)
T cd04190 71 PDDPEFILLVDADTKFDPDSIVQLYKAMDKDPE-IGGVCGEIHPMG 115 (244)
T ss_pred cCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCC-EEEEEeeeEEcC
Confidence 348999999999999999999988877767774 445556655433
No 140
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=31.25 E-value=78 Score=32.96 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=37.8
Q ss_pred CCCCceEEEEEec-cchHHHHHHHHHhcccccceEEEEcCCCCCCCC
Q psy16950 163 NASEQFTAIIYAQ-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVP 208 (430)
Q Consensus 163 ~~~~~fTvvi~ty-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P 208 (430)
...+...+||+.+ |.+-|..+|.+|++..++.+.++|-+. +.-.+
T Consensus 28 l~~~~~vivvqVH~r~~yl~~li~sL~~~~~I~~~llifSH-d~~~~ 73 (356)
T PF05060_consen 28 LANDSIVIVVQVHNRPEYLKLLIDSLSQARGIEEALLIFSH-DFYSE 73 (356)
T ss_pred CCCCCEEEEEEECCcHHHHHHHHHHHHHhhCccceEEEEec-cCChH
Confidence 4557788999999 888888899999999999999999888 54433
No 141
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=30.88 E-value=2e+02 Score=33.11 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=49.5
Q ss_pred ccHHhhhccCcEEEecCC-CCCCcchHHHHHhhCcee----eEeeCCcccCCCCCCCCCceEEEecccccccHHHHHhc-
Q psy16950 11 YDFQVLLHNSTFCLVPRG-RRLGSFRFLETLQAGCIP----VILSNGWVLPFDQVIDWSKAAVWADERLLLQVPDTVRS- 84 (430)
Q Consensus 11 ~~y~~~l~~S~FCL~p~G-~~~~s~Rl~eal~~GCIP----Vii~d~~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~- 84 (430)
.++..+++.+.-|++|.= +|. ..-.+|||++|+ | +|+++---- .+.+ ..-++.|+..+..++.+.+..
T Consensus 367 ~el~aly~~ADvfvvtSlrEGm-nLv~lEamA~g~-p~~gvlVlSe~~G~--~~~l--~~~allVnP~D~~~lA~AI~~a 440 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGM-NLVSYEFVACQK-AKKGVLVLSEFAGA--GQSL--GAGALLVNPWNITEVSSAIKEA 440 (797)
T ss_pred HHHHHHHHhCCEEEeCcccccc-CcchhhHheeec-CCCCCEEeeCCcCc--hhhh--cCCeEEECCCCHHHHHHHHHHH
Confidence 356788999999999862 333 356899999998 5 777763211 1112 335888888788776554422
Q ss_pred --CCHHHHHHHHH
Q psy16950 85 --ISATQVLAARQ 95 (430)
Q Consensus 85 --i~~~~i~~mr~ 95 (430)
.++++..++.+
T Consensus 441 L~m~~~er~~r~~ 453 (797)
T PLN03063 441 LNMSDEERETRHR 453 (797)
T ss_pred HhCCHHHHHHHHH
Confidence 34555444333
No 142
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=29.22 E-value=2.3e+02 Score=29.74 Aligned_cols=99 Identities=11% Similarity=0.110 Sum_probs=63.7
Q ss_pred hccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCcccCCCC-CCCCCceEEEecc-cccccHHHHHhcC--CHHHHHH
Q psy16950 17 LHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVLPFDQ-VIDWSKAAVWADE-RLLLQVPDTVRSI--SATQVLA 92 (430)
Q Consensus 17 l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~LPF~~-~iDW~~~sv~i~~-~~l~~l~~~L~~i--~~~~i~~ 92 (430)
..+-+|-+...|.+. |.||.--|++|++.+.....+.-=|.+ ...|.-+. =|.. .++..|.+.++=. .+++.++
T Consensus 212 ~~~yKYli~idG~~~-S~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYV-PV~~~~d~sdL~~~v~w~~~~~~~A~~ 289 (395)
T PF05686_consen 212 QCKYKYLIYIDGNAW-SGRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYV-PVKRDDDLSDLEEKVEWLNAHDDEAQR 289 (395)
T ss_pred HhhhheeecCCCcee-ehhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEE-EeccccchhhHHHHhhhcccChHHHHH
Confidence 345678888899987 689998999999999886654333333 44565553 3333 3455555554322 4677888
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHHHH
Q psy16950 93 ARQQTQVLWERYFSSIEKIVFTTFEI 118 (430)
Q Consensus 93 mr~~~~~l~~~yf~s~~~i~~t~l~i 118 (430)
+-++++.+.+++++. +++.......
T Consensus 290 IA~~g~~f~~~~L~~-~~~~~Y~~~L 314 (395)
T PF05686_consen 290 IAENGQRFAREYLTM-EDVYCYWRRL 314 (395)
T ss_pred HHHHHHHHHHHHhhh-hHHHHHHHHH
Confidence 888888888888853 4444443333
No 143
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=27.73 E-value=1.1e+02 Score=31.41 Aligned_cols=95 Identities=15% Similarity=0.102 Sum_probs=53.1
Q ss_pred EEEEec-cchHHHHHHHHHhcc-cc--cceEEEEcCCCCCCCCcccccccCCCCCcc-cc----CCCc------------
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHS-QY--VSRIIVLWSSPDKPVPAFLSRHNATLPPIH-IL----THIT------------ 228 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~-~~--l~~IvVvWn~~~~~~P~~l~~~~~~~p~~~-Vp----~~~n------------ 228 (430)
|+|.|| |.+.|.+.|..+.+. |+ -.+|+|.=.+ ....... ..+..-..+. +. ...|
T Consensus 4 Vlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG-~~~~~~~--~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ 80 (334)
T cd02514 4 VLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDG-GYEEVAD--VAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYR 80 (334)
T ss_pred EEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCC-CchHHHH--HHHhhccccEEEEcccccccccCcccccchhhH
Confidence 789999 888999999988765 23 4567777444 2221122 1111100111 11 1111
Q ss_pred -------ccccccccCCCCCCceEEEecCCCCCChHHHH---HHHHHHHhCC
Q psy16950 229 -------DISHRFLHTSLVTTNAVLSLDEDATLNTDEID---FAFHVWKSFP 270 (430)
Q Consensus 229 -------sLnnRF~p~~~i~T~AVl~~DDDv~~~~~~l~---faF~~Wr~~p 270 (430)
.+|.-|. ....+.|+.+|||..++++=++ -+...-+..+
T Consensus 81 ia~hyk~aln~vF~---~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~ 129 (334)
T cd02514 81 IARHYKWALTQTFN---LFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDP 129 (334)
T ss_pred HHHHHHHHHHHHHH---hcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCC
Confidence 2332232 2357999999999999999554 4444444444
No 144
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=26.69 E-value=77 Score=28.45 Aligned_cols=31 Identities=29% Similarity=0.252 Sum_probs=25.4
Q ss_pred EEEecCCCCCChHHHHHHHHHHHhCCCC-eeec
Q psy16950 245 VLSLDEDATLNTDEIDFAFHVWKSFPER-IVGY 276 (430)
Q Consensus 245 Vl~~DDDv~~~~~~l~faF~~Wr~~p~r-lVGf 276 (430)
|+.+|+|..++.+.++...+.++ +|+- +|+.
T Consensus 2 v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~ 33 (193)
T PF13632_consen 2 VLFLDADTRLPPDFLERLVAALE-DPKVDAVQG 33 (193)
T ss_pred EEEEcCCCCCChHHHHHHHHHHh-CCCceEEEc
Confidence 78999999999999999999988 6643 4443
No 145
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=26.16 E-value=60 Score=35.15 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=28.7
Q ss_pred HHhhhccCcEEEec-CCCCCCcchHHHHHhhCceeeEeeC
Q psy16950 13 FQVLLHNSTFCLVP-RGRRLGSFRFLETLQAGCIPVILSN 51 (430)
Q Consensus 13 y~~~l~~S~FCL~p-~G~~~~s~Rl~eal~~GCIPVii~d 51 (430)
+..+.+.|.+=|+| ++...|-.+ +.||+.|||||+-..
T Consensus 362 a~~i~agaD~~lmPSrfEPcGL~q-l~amryGtvpIv~~t 400 (487)
T COG0297 362 AHLIYAGADVILMPSRFEPCGLTQ-LYAMRYGTLPIVRET 400 (487)
T ss_pred HHHHHhcCCEEEeCCcCcCCcHHH-HHHHHcCCcceEccc
Confidence 45677888888888 456556444 569999999999776
No 146
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=25.72 E-value=1.2e+02 Score=30.58 Aligned_cols=75 Identities=16% Similarity=0.188 Sum_probs=42.5
Q ss_pred cHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCC-cccCCCCCCCCCceEEEecccccccHHHHHhcC--CHH
Q psy16950 12 DFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNG-WVLPFDQVIDWSKAAVWADERLLLQVPDTVRSI--SAT 88 (430)
Q Consensus 12 ~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~-~~LPF~~~iDW~~~sv~i~~~~l~~l~~~L~~i--~~~ 88 (430)
++...|+.+.+++.+.|. -+.||+.+|+ |||.... -..| +.++ ....+.++ .+..+|.+.++.+ .++
T Consensus 267 ~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~~-~g~~~lv~-~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 267 DFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETVE-AGTNKLVG-TDKENITKAAKRLLTDPD 336 (365)
T ss_pred HHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHHh-cCceEEeC-CCHHHHHHHHHHHHhChH
Confidence 577888999998877642 2799999986 7777532 1122 3443 33444554 3344444444332 344
Q ss_pred HHHHHHHH
Q psy16950 89 QVLAARQQ 96 (430)
Q Consensus 89 ~i~~mr~~ 96 (430)
...+|.++
T Consensus 337 ~~~~~~~~ 344 (365)
T TIGR00236 337 EYKKMSNA 344 (365)
T ss_pred HHHHhhhc
Confidence 44555443
No 147
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=25.64 E-value=64 Score=33.08 Aligned_cols=44 Identities=30% Similarity=0.505 Sum_probs=35.5
Q ss_pred cccHHhhhccCcEEEecCCCCCCcchHHHHHhhCceeeEeeCCccc
Q psy16950 10 RYDFQVLLHNSTFCLVPRGRRLGSFRFLETLQAGCIPVILSNGWVL 55 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GCIPVii~d~~~L 55 (430)
+.+|+..+.+.+-|+|= |..... -++|+|.-|-|||++++...+
T Consensus 123 ~~~yp~af~n~kvvvv~-GwDy~~-~~~e~~k~~~~p~~~~n~~~~ 166 (337)
T COG2247 123 REDYPNAFKNVKVVVVY-GWDYAD-ALMELMKEGIVPVILKNTSIL 166 (337)
T ss_pred HhhchhhhcCeEEEEEe-ccccHH-HHHHHHhcCcceeEecccccc
Confidence 45688888888889886 655543 899999999999999997654
No 148
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=25.54 E-value=1.7e+02 Score=26.54 Aligned_cols=98 Identities=9% Similarity=0.114 Sum_probs=51.5
Q ss_pred EEEEec-cchHHHHHHHHHhcccccceEEEEcCCCCCCCCccccccc--CCCCCcccc-C--------CCcccccccccC
Q psy16950 170 AIIYAQ-LGTSLYKVIRNVAHSQYVSRIIVLWSSPDKPVPAFLSRHN--ATLPPIHIL-T--------HITDISHRFLHT 237 (430)
Q Consensus 170 vvi~ty-r~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~~P~~l~~~~--~~~p~~~Vp-~--------~~nsLnnRF~p~ 237 (430)
|||-+| ..+.|.+.|+++.+...--+|+||=++ ... .....+. ...+.+.+- . ....+|.=+.-.
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~~~~eIivvdd~-S~D--~t~~~~~~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~ 77 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNKPNFLVLVIDDA-SDD--DTAGIVRLAITDSRVHLLRRHLPNARTGKGDALNAAYDQI 77 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCCCCeEEEEEECC-CCc--CHHHHHhheecCCcEEEEeccCCcCCCCHHHHHHHHHHHH
Confidence 578888 556677788887654333478887555 221 1111111 111222211 0 111222222111
Q ss_pred C--------CCCCceEEEecCCCCCChHHHHHHHHHHHhCCC
Q psy16950 238 S--------LVTTNAVLSLDEDATLNTDEIDFAFHVWKSFPE 271 (430)
Q Consensus 238 ~--------~i~T~AVl~~DDDv~~~~~~l~faF~~Wr~~p~ 271 (430)
. ..+.+.|+.+|.|..++++.|+..-... ++|.
T Consensus 78 ~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~-~~~~ 118 (191)
T cd06436 78 RQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF-SDPR 118 (191)
T ss_pred hhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh-cCCc
Confidence 0 1235789999999999999999854433 4553
No 149
>PLN02275 transferase, transferring glycosyl groups
Probab=23.83 E-value=81 Score=32.05 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=29.3
Q ss_pred cccHHhhhccCcEEEecCC----CCCCcchHHHHHhhCceeeEeeC
Q psy16950 10 RYDFQVLLHNSTFCLVPRG----RRLGSFRFLETLQAGCIPVILSN 51 (430)
Q Consensus 10 ~~~y~~~l~~S~FCL~p~G----~~~~s~Rl~eal~~GCIPVii~d 51 (430)
+.+..+.|+.+..|+.|.. .+. ..-++|||++|+ |||.++
T Consensus 297 ~~~~~~~l~~aDv~v~~~~s~~~e~~-p~~llEAmA~G~-PVVa~~ 340 (371)
T PLN02275 297 AEDYPLLLGSADLGVSLHTSSSGLDL-PMKVVDMFGCGL-PVCAVS 340 (371)
T ss_pred HHHHHHHHHhCCEEEEeccccccccc-cHHHHHHHHCCC-CEEEec
Confidence 3567788999999987632 222 357999999996 888776
Done!