BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16951
(282 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 173/269 (64%), Gaps = 15/269 (5%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED 66
NL FQ V + + Y ++K+GEGGFS V L+E YALK+I+CH ++D
Sbjct: 16 NLYFQ------GHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD 69
Query: 67 QAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELR 126
+ +A RE + H+ F HPNIL L+ + L + + ++LP++ +GTL N++E
Sbjct: 70 REEAQREADMHRLFNHPNILRLVAYCLR-----ERGAKHEAWLLLPFFKRGTLWNEIERL 124
Query: 127 SVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSV 186
++++ IL + L IC ++ H AK YAHRDLK N+LL ++ P+LMDLGS+
Sbjct: 125 KDKGNFLTEDQILWLLLGICRGLEAIH-AK--GYAHRDLKPTNILLGDEGQPVLMDLGSM 181
Query: 187 APAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
A + V GS +A LQD AA+RC++ YRAPELF V S+CV+D+RTDVWSLGC+LYAM +
Sbjct: 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241
Query: 247 FKSPFDTVYERGDSVALAVISGNITFPEN 275
+ P+D V+++GDSVALAV ++ P++
Sbjct: 242 GEGPYDMVFQKGDSVALAV-QNQLSIPQS 269
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV-HPNILPLLDHA 92
+ EGGF+ V + + + YALK+++ + E I+EV K HPNI+ A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 93 LTGCADPVLNSTSQV-LMVLPYYPKGTLANDLE-LRSVGKHYMSSVDILKMFLKICEAVK 150
G + + T Q ++L KG L L+ + S G +S +LK+F + C AV+
Sbjct: 96 SIGKEE---SDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCDTVLKIFYQTCRAVQ 150
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV--VKVCGSAEAQNLQDVAAE 208
H KP HRDLK N+LL+N L D GS SA+ + L +
Sbjct: 151 HMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 209 RCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVIS 267
R + P YR PE+ + S + ++ D+W+LGC+LY +C+ + PF+ D L +++
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE------DGAKLRIVN 263
Query: 268 GNITFP 273
G + P
Sbjct: 264 GKYSIP 269
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 37/266 (13%)
Query: 13 GCLCSKEAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQ 69
G E +Y +S +KY ++KIGEG F L++ ++ ++Y +K+I +++ +
Sbjct: 10 GVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE 69
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
+ REV HPNI+ + + +V+ Y G L + +
Sbjct: 70 SRREVAVLANMKHPNIVQYRES---------FEENGSLYIVMDYCEGGDLFKRINAQ--- 117
Query: 130 KHYMSSVD-ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
K + D IL F++IC A+K HD K + HRD+K+ N+ L D L D G
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVHDRKIL---HRDIKSQNIFLTKDGTVQLGDFG---- 170
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ +V S ++A PY +PE+ Y + ++D+W+LGC+LY +C
Sbjct: 171 -IARVLNST-----VELARACIGTPYYLSPEICENKPY---NNKSDIWALGCVLYELCTL 221
Query: 248 KSPFDTVYERGDSVALAVISGNITFP 273
K F+ + ++ L +ISG +FP
Sbjct: 222 KHAFEAGSMK--NLVLKIISG--SFP 243
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 105/253 (41%), Gaps = 54/253 (21%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-- 70
G + S E ++ + Y +++ IG+G F+ V L H T + A+K I D+ Q
Sbjct: 1 GAMGSDEQPHIGN--YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNP 52
Query: 71 ------IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
REV K HPNI+ L + V+ + + +++ Y G + + L
Sbjct: 53 TSLQKLFREVRIMKILNHPNIVKLFE---------VIETEKTLYLIMEYASGGEVFDYL- 102
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V M + F +I AV+ H + + HRDLK N+LL D N + D G
Sbjct: 103 ---VAHGRMKEKEARSKFRQIVSAVQYCHQKRIV---HRDLKAENLLLDADMNIKIADFG 156
Query: 185 -----SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
+V + CGS PY APELF Y DVWSLG
Sbjct: 157 FSNEFTVGGKLDTFCGSP---------------PYAAPELFQGKKYD--GPEVDVWSLGV 199
Query: 240 LLYAMCYFKSPFD 252
+LY + PFD
Sbjct: 200 ILYTLVSGSLPFD 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V+ S +++MV+ Y N+L V + MS + + F +
Sbjct: 75 IIKLYD---------VIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I AV+ H K + HRDLK N+LL N + D G + +
Sbjct: 121 IISAVEYCHRHKIV---HRDLKPENLLLDEHLNVKIADF-----------GLSNIMTDGN 166
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
C P Y APE+ Y DVWS G +LY M + PFD
Sbjct: 167 FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V+ S +++MV+ Y N+L V + MS + + F +
Sbjct: 70 IIKLYD---------VIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I AV+ H K + HRDLK N+LL N + D G + +
Sbjct: 116 IISAVEYCHRHKIV---HRDLKPENLLLDEHLNVKIADF-----------GLSNIMTDGN 161
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
C P Y APE+ Y DVWS G +LY M + PFD
Sbjct: 162 FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V+ S +++MV+ Y N+L V + MS + + F +
Sbjct: 76 IIKLYD---------VIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I AV+ H K + HRDLK N+LL N + D G + +
Sbjct: 122 IISAVEYCHRHKIV---HRDLKPENLLLDEHLNVKIADF-----------GLSNIMTDGN 167
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
C P Y APE+ Y DVWS G +LY M + PFD
Sbjct: 168 FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
Y IV+ +GEG F V L H+ T ++ ALK K + + Q + RE+ + + HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V+ S +++MV+ Y N+L V + MS + + F +
Sbjct: 66 IIKLYD---------VIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQ 111
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I AV+ H K + HRDLK N+LL N + D G + +
Sbjct: 112 IISAVEYCHRHKIV---HRDLKPENLLLDEHLNVKIADF-----------GLSNIMTDGN 157
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
C P Y APE+ Y DVWS G +LY M + PFD
Sbjct: 158 FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 54/250 (21%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA----- 70
C+ E ++ + Y +++ IG+G F+ V L H T + A+K I D+ Q
Sbjct: 7 CADEQPHIGN--YRLLKTIGKGNFAKVKLARHILTGREVAIKII------DKTQLNPTSL 58
Query: 71 ---IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS 127
REV K HPNI+ L + V+ + + +++ Y G + + L
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFE---------VIETEKTLYLIMEYASGGEVFDYL---- 105
Query: 128 VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG--- 184
V M + F +I AV+ H + + HRDLK N+LL D N + D G
Sbjct: 106 VAHGRMKEKEARSKFRQIVSAVQYCHQKRIV---HRDLKAENLLLDADMNIKIADFGFSN 162
Query: 185 --SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+V + CG+ PY APELF Y DVWSLG +LY
Sbjct: 163 EFTVGGKLDAFCGAP---------------PYAAPELFQGKKYD--GPEVDVWSLGVILY 205
Query: 243 AMCYFKSPFD 252
+ PFD
Sbjct: 206 TLVSGSLPFD 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V +M + F +
Sbjct: 68 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGWMKEKEARAKFRQ 114
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CGS
Sbjct: 115 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-- 169
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 170 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 27 KYY-IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
KYY + E IG GGF+ V L H T + A+K + + I+ E+E K H +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I L VL + +++ MVL Y P G L + + + + +S + +F +
Sbjct: 70 ICQLYH---------VLETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRVVFRQ 116
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I AV H YAHRDLK N+L + L+D G +C A+ + +D
Sbjct: 117 IVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG--------LC--AKPKGNKD 163
Query: 205 VAAERC--SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA-MCYFKSPFD 252
+ C S+ Y APEL SY + DVWS+G LLY MC F PFD
Sbjct: 164 YHLQTCCGSLAYAAPELIQGKSY--LGSEADVWSMGILLYVLMCGF-LPFD 211
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 96/238 (40%), Gaps = 52/238 (21%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA--------IREVEHHKT 79
Y + + IG+G F+ V L H T + A+K I D+ Q REV K
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKII------DKTQLNPTSLQKLFREVRIMKI 70
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HPNI+ L + V+ + + +V+ Y G + + L V M +
Sbjct: 71 LNHPNIVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEAR 117
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVC 194
F +I AV+ H + HRDLK N+LL D N + D G +V + C
Sbjct: 118 AKFRQIVSAVQYCHQKYIV---HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC 174
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
GS PY APELF Y DVWSLG +LY + PFD
Sbjct: 175 GSP---------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V M + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CGS
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V M + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CGS
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A++ II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V M + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + + CGS
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A++ II + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V M + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CGS
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V+ Y G + + L V M + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CG+
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTF 80
+++ Y ++ IG G + I K K++ +G +A+ + EV +
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLREL 62
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVL-MVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HPNI+ D +++ T+ L +V+ Y G LA+ + + + Y+ +L
Sbjct: 63 KHPNIVRYYDR--------IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 140 KMFLKICEAVKVFHDAKPIAYA--HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
++ ++ A+K H + HRDLK ANV L N L D G + ++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG-----LARILNHD 169
Query: 198 EAQNLQDVAAERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E D A E PY +PE + SY ++++D+WSLGCLLY +C PF
Sbjct: 170 E-----DFAKEFVGTPYYMSPEQMNRMSY---NEKSDIWSLGCLLYELCALMPPF 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI---ICHGREDQAQAIREVEHHKTFVHPN 84
Y I E +GEG F V L H +T+++ ALK I + + + RE+ + K HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V+ + + ++MV+ Y G L + + V K M+ + + F +
Sbjct: 71 IIKLYD---------VITTPTDIVMVIE-YAGGELFDYI----VEKKRMTEDEGRRFFQQ 116
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I A++ H K + HRDLK N+LL ++ N + D G + +
Sbjct: 117 IICAIEYCHRHKIV---HRDLKPENLLLDDNLNVKIADF-----------GLSNIMTDGN 162
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
C P Y APE+ + Y DVWS G +LY M + PFD
Sbjct: 163 FLKTSCGSPNYAAPEVINGKLYA--GPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVHPN 84
Y +++ IG+G F+ V L H T K A+ KII + + + + REV K HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + V+ + + +V Y G + + L V + F +
Sbjct: 75 IVKLFE---------VIETEKTLYLVXEYASGGEVFDYL----VAHGRXKEKEARAKFRQ 121
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVCGSAEA 199
I AV+ H + HRDLK N+LL D N + D G + + CG+
Sbjct: 122 IVSAVQYCHQKFIV---HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP-- 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
PY APELF Y DVWSLG +LY + PFD
Sbjct: 177 -------------PYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 42/282 (14%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHG 63
NL FQ + + + + SD+Y +G+G F V L + T + A+K K
Sbjct: 13 NLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 72
Query: 64 REDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL 123
+ D+ +REV+ K HPNI+ L + +V Y G L +++
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYE---------FFEDKGYFYLVGEVYTGGELFDEI 123
Query: 124 ELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL---ANDNNPLL 180
+ + S VD ++ ++ + H K + HRDLK N+LL + D N +
Sbjct: 124 ----ISRKRFSEVDAARIIRQVLSGITYMHKNKIV---HRDLKPENLLLESKSKDANIRI 176
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCL 240
+D G S + + + + + Y APE+ H D++ DVWS G +
Sbjct: 177 IDFGL----------STHFEASKKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVI 222
Query: 241 LYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTPFPQYQ 282
LY + PF+ E + V G TF PQ++
Sbjct: 223 LYILLSGCPPFNGANEY--DILKKVEKGKYTF----ELPQWK 258
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 44/261 (16%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVHPN 84
+ I +KIG G FS V ALKK+ D +A I+E++ K HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ + + D LN +VL G L+ ++ K + + K F++
Sbjct: 94 VI---KYYASFIEDNELN------IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG------SVAPAVVKVCGSAE 198
+C A++ H + + HRD+K ANV + L DLG S A + G+
Sbjct: 145 LCSALEHMHSRRVM---HRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
Y +PE H + Y + ++D+WSLGCLLY M +SPF G
Sbjct: 202 ---------------YMSPERIHENGY---NFKSDIWSLGCLLYEMAALQSPF-----YG 238
Query: 259 DSVALAVISGNITFPENTPFP 279
D + L + I + P P
Sbjct: 239 DKMNLYSLCKKIEQCDYPPLP 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTF 80
+++ Y ++ IG G + I K K++ +G +A+ + EV +
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLREL 62
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVL-MVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HPNI+ D +++ T+ L +V+ Y G LA+ + + + Y+ +L
Sbjct: 63 KHPNIVRYYDR--------IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 140 KMFLKICEAVKVFHDAKPIAYA--HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
++ ++ A+K H + HRDLK ANV L N L D G + ++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG-----LARILNHD 169
Query: 198 EAQNLQDVAAERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A PY +PE + SY ++++D+WSLGCLLY +C PF
Sbjct: 170 TS-----FAKTFVGTPYYMSPEQMNRMSY---NEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTF 80
+++ Y ++ IG G + I K K++ +G +A+ + EV +
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLREL 62
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVL-MVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HPNI+ D +++ T+ L +V+ Y G LA+ + + + Y+ +L
Sbjct: 63 KHPNIVRYYDR--------IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 140 KMFLKICEAVKVFHDAKPIAYA--HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
++ ++ A+K H + HRDLK ANV L N L D G + ++
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG-----LARILNHD 169
Query: 198 EAQNLQDVAAERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A PY +PE + SY ++++D+WSLGCLLY +C PF
Sbjct: 170 TS-----FAKAFVGTPYYMSPEQMNRMSY---NEKSDIWSLGCLLYELCALMPPF 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + D TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 71 HPAIVAVYD---TGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 121
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN++++ N +MD G +A A+ S
Sbjct: 122 IADACQALNFSHQNGII---HRDVKPANIMISATNAVKVMDFG-IARAIADSGNS----- 172
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSV 261
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF + DSV
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF--TGDSPDSV 227
Query: 262 A 262
A
Sbjct: 228 A 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + D TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 71 HPAIVAVYD---TGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 121
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN++++ N +MD G +A A+ S
Sbjct: 122 IADACQALNFSHQNGII---HRDVKPANIMISATNAVKVMDFG-IARAIADSGNS----- 172
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 37/263 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFV 81
+++Y IV+K+G GG STV L E + + A+K I RE + + REV +
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
H NI+ ++D V +V+ Y TL+ +E H SVD
Sbjct: 70 HQNIVSMID---------VDEEDDCYYLVMEYIEGPTLSEYIE-----SHGPLSVDTAIN 115
Query: 142 FL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
F +I + +K HD + + HRD+K N+L+ ++ + D G +A A+ + +
Sbjct: 116 FTNQILDGIKHAHDMRIV---HRDIKPQNILIDSNKTLKIFDFG-IAKALSETSLTQTNH 171
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
L ++ Y +PE ++ D+ TD++S+G +LY M + PF+ E S
Sbjct: 172 VL-------GTVQYFSPEQAKGEA---TDECTDIYSIGIVLYEMLVGEPPFNG--ETAVS 219
Query: 261 VALAVISG---NITFPENTPFPQ 280
+A+ I N+T PQ
Sbjct: 220 IAIKHIQDSVPNVTTDVRKDIPQ 242
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + D TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 88 HPAIVAVYD---TGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 138
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN++++ N +MD G +A A+ +
Sbjct: 139 IADACQALNFSHQNGII---HRDVKPANIMISATNAVKVMDFG-IARAIAD-----SGNS 189
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + D TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 71 HPAIVAVYD---TGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 121
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN++++ N +MD G +A A+ S
Sbjct: 122 IADACQALNFSHQNGII---HRDVKPANIMISATNAVKVMDFG-IARAIADSGNS----- 172
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G + SK+ + D + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL + + D G SV A
Sbjct: 111 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 164 PSSRRTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 205
Query: 246 YFKSPFD 252
K PF+
Sbjct: 206 VGKPPFE 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G + SK+ + D + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P+G + +L+ S
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPRGEVYKELQKLSKF 110
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL + + D G SV A
Sbjct: 111 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 164 PSSRRTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 205
Query: 246 YFKSPFD 252
K PF+
Sbjct: 206 VGKPPFE 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + D TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 71 HPAIVAVYD---TGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 121
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN+L++ N ++D G +A A+ S
Sbjct: 122 IADACQALNFSHQNGII---HRDVKPANILISATNAVKVVDFG-IARAIADSGNS----- 172
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 36/236 (15%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-I 71
G L S A+ +K K +++ IG+G F V L ++ K A+K C + AQA +
Sbjct: 1 GPLGSGWALNMKELK--LLQTIGKGEFGDVMLGDYRGNK--VAVK---CIKNDATAQAFL 53
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH 131
E H N++ LL ++ + +V Y KG+L + LRS G+
Sbjct: 54 AEASVMTQLRHSNLVQLLG--------VIVEEKGGLYIVTEYMAKGSLVD--YLRSRGRS 103
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVV 191
+ +LK L +CEA++ + HRDL NVL++ DN + D G
Sbjct: 104 VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGL------ 154
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ EA + QD + + + APE ++ ++DVWS G LL+ + F
Sbjct: 155 ----TKEASSTQDTG--KLPVKWTAPEALREAAFST---KSDVWSFGILLWEIYSF 201
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 42/264 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HPNI+ L + +V Y G L +++ + + S VD ++
Sbjct: 109 HPNIMKLYE---------FFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARI 155
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLL---ANDNNPLLMDLGSVAPAVVKVCGSAE 198
++ + H K + HRDLK N+LL + D N ++D G S
Sbjct: 156 IRQVLSGITYMHKNKIV---HRDLKPENLLLESKSKDANIRIIDFGL----------STH 202
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
+ + + + + Y APE+ H D++ DVWS G +LY + PF+ E
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY- 257
Query: 259 DSVALAVISGNITFPENTPFPQYQ 282
+ V G TF PQ++
Sbjct: 258 -DILKKVEKGKYTF----ELPQWK 276
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 42/264 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HPNI+ L + +V Y G L +++ + + S VD ++
Sbjct: 108 HPNIMKLYE---------FFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARI 154
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLL---ANDNNPLLMDLGSVAPAVVKVCGSAE 198
++ + H K + HRDLK N+LL + D N ++D G S
Sbjct: 155 IRQVLSGITYMHKNKIV---HRDLKPENLLLESKSKDANIRIIDFGL----------STH 201
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
+ + + + + Y APE+ H D++ DVWS G +LY + PF+ E
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY- 256
Query: 259 DSVALAVISGNITFPENTPFPQYQ 282
+ V G TF PQ++
Sbjct: 257 -DILKKVEKGKYTF----ELPQWK 275
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 42/264 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HPNI+ L + +V Y G L +++ + + S VD ++
Sbjct: 85 HPNIMKLYE---------FFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARI 131
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLL---ANDNNPLLMDLGSVAPAVVKVCGSAE 198
++ + H K + HRDLK N+LL + D N ++D G S
Sbjct: 132 IRQVLSGITYMHKNKIV---HRDLKPENLLLESKSKDANIRIIDFGL----------STH 178
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
+ + + + + Y APE+ H D++ DVWS G +LY + PF+ E
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY- 233
Query: 259 DSVALAVISGNITFPENTPFPQYQ 282
+ V G TF PQ++
Sbjct: 234 -DILKKVEKGKYTF----ELPQWK 252
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G SK+ + D + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GSHMSKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL + + D G SV A
Sbjct: 111 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 164 PSSRRTDLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 205
Query: 246 YFKSPFD 252
K PF+
Sbjct: 206 VGKPPFE 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL-ELRSVGKHYMSSVDILKM 141
NI+ L D V+++ ++++V + L DL +L V + + SV
Sbjct: 60 SNIVKLYD---------VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSF 105
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
L++ + HD + + HRDLK N+L+ + + D G A
Sbjct: 106 LLQLLNGIAYCHDRRVL---HRDLKPQNLLINREGELKIADFG---------LARAFGIP 153
Query: 202 LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
++ E ++ YRAP+ L Y D+WS+GC+ M F V E
Sbjct: 154 VRKYTHEVVTLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 261 VALAVISG---NITFPENTPFPQY 281
+ + I G + +P T P+Y
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKY 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL-ELRSVGKHYMSSVDILKM 141
NI+ L D V+++ ++++V + L DL +L V + + SV
Sbjct: 60 SNIVKLYD---------VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSF 105
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
L++ + HD + + HRDLK N+L+ + + D G A
Sbjct: 106 LLQLLNGIAYCHDRRVL---HRDLKPQNLLINREGELKIADFG---------LARAFGIP 153
Query: 202 LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
++ E ++ YRAP+ L Y D+WS+GC+ M F V E
Sbjct: 154 VRKYTHEVVTLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNGAPLFPGVSEADQL 210
Query: 261 VALAVISG---NITFPENTPFPQY 281
+ + I G + +P T P+Y
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKY 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ---AQAIREVEHHKTFVH 82
+KY+ +EKIGEG + V +++ + +ALKKI +ED+ + IRE+ K H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL-ELRSVGKHYMSSVDILKM 141
NI+ L D V+++ ++++V + L DL +L V + + SV
Sbjct: 60 SNIVKLYD---------VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSF 105
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
L++ + HD + + HRDLK N+L+ + + D G A
Sbjct: 106 LLQLLNGIAYCHDRRVL---HRDLKPQNLLINREGELKIADFG---------LARAFGIP 153
Query: 202 LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
++ E ++ YRAP+ L Y D+WS+GC+ M F V E
Sbjct: 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 261 VALAVISG---NITFPENTPFPQY 281
+ + I G + +P T P+Y
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKY 234
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + A RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIAANVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +V+ Y G L R S + F +
Sbjct: 77 IVRFKEVILT---------PTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQ 123
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNL 202
+ V H + HRDLK N LL GS AP +K+C G +++ L
Sbjct: 124 LISGVSYCH---AMQVCHRDLKLENTLLD----------GSPAPR-LKICDFGYSKSSVL 169
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
P Y APE+ Y + DVWS G LY M PF+
Sbjct: 170 HSQPKSTVGTPAYIAPEVLLKKEYD--GKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 35/241 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIRE 73
SK VK Y + + +G G F V + EH T + A+K + + + RE
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH-Y 132
+++ K F HP+I+ L V+++ + MV+ Y G L + + KH
Sbjct: 62 IQNLKLFRHPHIIKLYQ---------VISTPTDFFMVMEYVSGGELFD-----YICKHGR 107
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ ++ ++F +I AV H + HRDLK NVLL N + D G
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVV---HRDLKPENVLLDAHMNAKIADFGLSNMM--- 161
Query: 193 VCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ + L+D C P Y APE+ + D+WS G +LYA+ PF
Sbjct: 162 ----SDGEFLRD----SCGSPNYAAPEV--ISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 252 D 252
D
Sbjct: 212 D 212
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
+ E +G G F V + K A+K+I ++ I E+ HPNI+ L
Sbjct: 13 VEEVVGRGAFGVVC--KAKWRAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
C +PV +V+ Y G+L N L +Y ++ + L+ + V
Sbjct: 69 G----ACLNPVC-------LVMEYAEGGSLYNVLHGAEPLPYY-TAAHAMSWCLQCSQGV 116
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD-VAAE 208
H +P A HRDLK N+LL V+K+C A ++Q +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGT------------VLKICDFGTACDIQTHMTNN 164
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISG 268
+ S + APE+F +Y ++ DV+S G +L+ + + PFD + + AV +G
Sbjct: 165 KGSAAWMAPEVFEGSNY---SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG 221
Query: 269 N 269
Sbjct: 222 T 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
+ E +G G F V + K A+K+I ++ I E+ HPNI+ L
Sbjct: 12 VEEVVGRGAFGVVC--KAKWRAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
C +PV +V+ Y G+L N L +Y ++ + L+ + V
Sbjct: 68 G----ACLNPVC-------LVMEYAEGGSLYNVLHGAEPLPYY-TAAHAMSWCLQCSQGV 115
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD-VAAE 208
H +P A HRDLK N+LL V+K+C A ++Q +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGT------------VLKICDFGTACDIQTHMTNN 163
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISG 268
+ S + APE+F +Y ++ DV+S G +L+ + + PFD + + AV +G
Sbjct: 164 KGSAAWMAPEVFEGSNY---SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG 220
Query: 269 N 269
Sbjct: 221 T 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D + S + +++ G L + R V K + + D ++ +
Sbjct: 78 IVAL---------DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRLIFQ 124
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVL---LANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ +AVK HD + HRDLK N+L L D+ ++ D G ++ ++
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF-----------GLSKMED 170
Query: 202 LQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
V + C P Y APE+ Y + D WS+G + Y + PF Y+ D+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYS---KAVDCWSIGVIAYILLCGYPPF---YDENDA 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-IREVEHHKTFVHPNILPL 88
+++ IG+G F V L ++ K A+K C + AQA + E H N++ L
Sbjct: 25 LLQTIGKGEFGDVMLGDYRGNK--VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
L ++ + +V Y KG+L + LRS G+ + +LK L +CEA
Sbjct: 80 LG--------VIVEEKGGLYIVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
++ + HRDL NVL++ DN + D G + EA + QD
Sbjct: 130 MEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGL----------TKEASSTQDTG-- 174
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ + + APE + ++DVWS G LL+ + F
Sbjct: 175 KLPVKWTAPEALREKKFST---KSDVWSFGILLWEIYSF 210
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-IREVEHHKTFVHPNILPL 88
+++ IG+G F V L ++ K A+K C + AQA + E H N++ L
Sbjct: 10 LLQTIGKGEFGDVMLGDYRGNK--VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
L ++ + +V Y KG+L + LRS G+ + +LK L +CEA
Sbjct: 65 LG--------VIVEEKGGLYIVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
++ + HRDL NVL++ DN + D G + EA + QD
Sbjct: 115 MEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGL----------TKEASSTQDTG-- 159
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ + + APE + ++DVWS G LL+ + F
Sbjct: 160 KLPVKWTAPEALREKKFST---KSDVWSFGILLWEIYSF 195
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 120
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 121 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT-- 172
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 173 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 43/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G + SK + + + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GAMGSKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKF 109
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL + + D G SV A
Sbjct: 110 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 162
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 163 PSSRRTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 204
Query: 246 YFKSPFD 252
K PF+
Sbjct: 205 VGKPPFE 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 42/242 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVH 82
D Y + +G G FS V L E +T+K A+K K G+E + V H H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH--KIKH 75
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D + S + +++ G L + R V K + + D ++
Sbjct: 76 PNIVAL---------DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRLI 122
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVL---LANDNNPLLMDLGSVAPAVVKVCGSAEA 199
++ +AVK HD + HRDLK N+L L D+ ++ D G ++
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF-----------GLSKM 168
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
++ V + C P Y APE+ Y + D WS+G + Y + PF Y+
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYS---KAVDCWSIGVIAYILLCGYPPF---YDEN 222
Query: 259 DS 260
D+
Sbjct: 223 DA 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFV 81
SD+Y + E +G GG S V L + + A+K + D + + RE ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP I+ + TG A+ ++M Y G D+ + + G M+ +++
Sbjct: 71 HPAIVAVY---ATGEAETPAGPLPYIVM---EYVDGVTLRDI-VHTEGP--MTPKRAIEV 121
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C+A+ H I HRD+K AN++++ N +MD G +A A+ S
Sbjct: 122 IADACQALNFSHQNGII---HRDVKPANIMISATNAVKVMDFG-IARAIADSGNS----- 172
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ AA + Y +PE DS VD R+DV+SLGC+LY + + PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D + S + +++ G L + R V K + + D ++ +
Sbjct: 78 IVAL---------DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRLIFQ 124
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVL---LANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ +AVK HD + HRDLK N+L L D+ ++ D G ++ ++
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF-----------GLSKMED 170
Query: 202 LQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
V + C P Y APE+ Y + D WS+G + Y + PF Y+ D+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYS---KAVDCWSIGVIAYILLCGYPPF---YDENDA 224
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 38/240 (15%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
D Y + +G G FS V L E +T+K A+K I E + ++ E+ HPN
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D + S + +++ G L + R V K + + D ++ +
Sbjct: 78 IVAL---------DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRLIFQ 124
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVL---LANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ +AVK HD + HRDLK N+L L D+ ++ D G ++ ++
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF-----------GLSKMED 170
Query: 202 LQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
V + C P Y APE+ Y + D WS+G + Y + PF Y+ D+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYS---KAVDCWSIGVIAYILLCGYPPF---YDENDA 224
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 96/235 (40%), Gaps = 33/235 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +V+ Y G L R S + F +
Sbjct: 77 IVRFKEVILT---------PTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQ 123
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNL 202
+ V H + HRDLK N LL GS AP +K+C G +++ L
Sbjct: 124 LISGVSYCH---AMQVCHRDLKLENTLLD----------GSPAPR-LKICAFGYSKSSVL 169
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYE 256
+ P Y APE+ Y + DVWS G LY M PF+ E
Sbjct: 170 HSQPKDTVGTPAYIAPEVLLKKEYD--GKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-IREVEHHKTFVHPNILPL 88
+++ IG+G F V L ++ K A+K C + AQA + E H N++ L
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNK--VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
L ++ + +V Y KG+L + LRS G+ + +LK L +CEA
Sbjct: 252 LG--------VIVEEKGGLYIVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
++ + HRDL NVL++ DN + D G + EA + QD
Sbjct: 302 MEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGL----------TKEASSTQDTG-- 346
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ + + APE + ++DVWS G LL+ + F
Sbjct: 347 KLPVKWTAPEALREKKFST---KSDVWSFGILLWEIYSF 382
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 113 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 166 RTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 207
Query: 250 PFD 252
PF+
Sbjct: 208 PFE 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 82
+++Y IV +G+G F V + T++ YA+K I +D + +REVE K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L + +L +S +V Y G L +++ + + S D ++
Sbjct: 81 PNIMKLFE---------ILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARII 127
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLAN---DNNPLLMDLGSVAPAVVKVCGSAEA 199
++ + H + HRDLK N+LL + D + ++D G + C
Sbjct: 128 KQVFSGITYMHKHNIV---HRDLKPENILLESKEKDCDIKIIDFG------LSTCFQQNT 178
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y APE+ D++ DVWS G +LY + PF
Sbjct: 179 KMKDRIG----TAYYIAPEVLR----GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAV--VKVCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ ++CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 113 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 166 RTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 207
Query: 250 PFD 252
PF+
Sbjct: 208 PFE 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 82
+++Y IV +G+G F V + T++ YA+K I +D + +REVE K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L + +L +S +V Y G L +++ + + S D ++
Sbjct: 81 PNIMKLFE---------ILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARII 127
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLAN---DNNPLLMDLGSVAPAVVKVCGSAEA 199
++ + H + HRDLK N+LL + D + ++D G + C
Sbjct: 128 KQVFSGITYMHKHNIV---HRDLKPENILLESKEKDCDIKIIDFG------LSTCFQQNT 178
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y APE+ D++ DVWS G +LY + PF
Sbjct: 179 KMKDRIG----TAYYIAPEVLR----GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 2 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 61 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 112 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 164
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 165 RXXLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 206
Query: 250 PFD 252
PF+
Sbjct: 207 PFE 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 71 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 120
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 121 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT-- 172
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 173 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 1 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 60 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 111 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 164 RDTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 205
Query: 250 PFD 252
PF+
Sbjct: 206 PFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 1 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 60 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 111 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 164 RTDLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 205
Query: 250 PFD 252
PF+
Sbjct: 206 PFE 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 113 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 166 RXXLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 207
Query: 250 PFD 252
PF+
Sbjct: 208 PFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 67 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 116
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 117 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT-- 168
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 169 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 17 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 76 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 126
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + D G SV AP+
Sbjct: 127 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSR 179
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 180 RTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 221
Query: 250 PFD 252
PF+
Sbjct: 222 PFE 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G + SK+ + D + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GAMESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P+G + +L+ S
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPRGEVYKELQKLSKF 110
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
++ I ++ A+ H + I HRD+K N+LL + + D G A
Sbjct: 111 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 190 VVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
S+ L ++ Y PE+ + D++ D+WSLG L Y K
Sbjct: 164 P-----SSRRXXLXG------TLDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 209
Query: 250 PFD 252
PF+
Sbjct: 210 PFE 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 26 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 85 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 134 SSVDILKMF--LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APA 189
++ I ++ L C + +V H RD+K N+LL + + D G SV AP+
Sbjct: 136 TATYITELANALSYCHSKRVIH---------RDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 190 VVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 187 SRRTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVG 228
Query: 248 KSPFD 252
K PF+
Sbjct: 229 KPPFE 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 16 CSKEAVYVK---SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQA 70
+E +Y + +++Y IV +G+G F V + T++ YA+K I +D +
Sbjct: 9 SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
+REVE K HPNI+ L + +L +S +V Y G L +++ + +
Sbjct: 69 LREVELLKKLDHPNIMKLFE---------ILEDSSSFYIVGELYTGGELFDEI----IKR 115
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLAN---DNNPLLMDLGSVA 187
S D ++ ++ + H + HRDLK N+LL + D + ++D G
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIV---HRDLKPENILLESKEKDCDIKIIDFG--- 169
Query: 188 PAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ C + + + Y APE+ D++ DVWS G +LY +
Sbjct: 170 ---LSTCFQQNTKMKDRIG----TAYYIAPEVLR----GTYDEKCDVWSAGVILYILLSG 218
Query: 248 KSPF 251
PF
Sbjct: 219 TPPF 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G SK+ + D + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GHXESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL + + D G SV A
Sbjct: 111 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE + D++ D+WSLG L Y
Sbjct: 164 PSSRRTTLCGT---------------LDYLPPEXIEGRXH---DEKVDLWSLGVLCYEFL 205
Query: 246 YFKSPFD 252
K PF+
Sbjct: 206 VGKPPFE 212
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 26 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 85 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 134 SSVDILKMF--LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APA 189
++ I ++ L C + +V H RD+K N+LL + + D G SV AP+
Sbjct: 136 TATYITELANALSYCHSKRVIH---------RDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 190 VVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 187 SRRDDLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVG 228
Query: 248 KSPFD 252
K PF+
Sbjct: 229 KPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q+K ALK + E + Q REVE H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 69 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 118
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSV--APAVVKVCGSAEAQ 200
A+ H + I HRD+K N+LL + + D G AP+ + S
Sbjct: 119 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG--- 169
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
++ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 ----------TLDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY-----A 140
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 196
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 197 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 242
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 243 -------IVSGKVRFP 251
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQA 70
G L S E + + + VEKIGEG + V + T + ALKKI + + A
Sbjct: 1 GPLGSPEFM----ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA 56
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
IRE+ K HPNI+ LLD V+++ +++ +V + L DL K
Sbjct: 57 IREISLLKELNHPNIVKLLD---------VIHTENKLYLVFEF-----LHQDL------K 96
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLG 184
+M + + + L + ++ +F + +A+ HRDLK N+L+ + L D G
Sbjct: 97 KFMDASALTGIPLPLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 155
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
A ++ E ++ YRAPE+ Y D+WSLGC+ M
Sbjct: 156 ---------LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY--STAVDIWSLGCIFAEM 204
Query: 245 CYFKSPF 251
++ F
Sbjct: 205 VTRRALF 211
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 95/235 (40%), Gaps = 33/235 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +V+ Y G L R S + F +
Sbjct: 77 IVRFKEVILT---------PTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQ 123
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNL 202
+ V H + HRDLK N LL GS AP +K+C G +++ L
Sbjct: 124 LISGVSYCH---AMQVCHRDLKLENTLLD----------GSPAPR-LKICAFGYSKSSVL 169
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYE 256
P Y APE+ Y + DVWS G LY M PF+ E
Sbjct: 170 HSQPKSTVGTPAYIAPEVLLKKEYD--GKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 168
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 224
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 225 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 270
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 271 -------IVSGKVRFP 279
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L Q K ALK + E + Q REVE H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + ++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 65 PNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 114
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H + I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 115 ---ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT-- 166
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 167 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ IG G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIRE 73
SK VK Y + + +G G F V + EH T + A+K + + + RE
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH-Y 132
+++ K F HP+I+ L V+++ + MV+ Y G L + + KH
Sbjct: 62 IQNLKLFRHPHIIKLYQ---------VISTPTDFFMVMEYVSGGELFD-----YICKHGR 107
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ ++ ++F +I AV H + HRDLK NVLL N + D G
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVV---HRDLKPENVLLDAHMNAKIADFGL------- 157
Query: 193 VCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + C P Y APE+ + D+WS G +LYA+ PF
Sbjct: 158 ----SNMMSDGEFLRTSCGSPNYAAPEV--ISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 252 D 252
D
Sbjct: 212 D 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 33/231 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q+ + A+ K I G + RE+ +H++ HPN
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAV-KYIERGEKIDENVKREIINHRSLRHPN 75
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +V+ Y G L R S + F +
Sbjct: 76 IVRFKEVILT---------PTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQ 122
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNL 202
+ V H + HRDLK N LL GS AP +K+C G +++ L
Sbjct: 123 LISGVSYCH---AMQVCHRDLKLENTLLD----------GSPAPR-LKICDFGYSKSSVL 168
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
P Y APE+ Y + DVWS G LY M PF+
Sbjct: 169 HSQPKSTVGTPAYIAPEVLLKKEYD--GKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV-HPNILPLLDHA 92
+GEG FS H ++ + +A+K I + +A +E+ K HPNI+ L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHE-- 73
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
V + +V+ G L R K + S + + K+ AV
Sbjct: 74 -------VFHDQLHTFLVMELLNGGELFE----RIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSM 212
HD + HRDLK N+L ++N+ L + + A +K + Q + ++
Sbjct: 123 HD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK------PPDNQPLKTPCFTL 173
Query: 213 PYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
Y APEL + + Y D+ D+WSLG +LY M + PF +
Sbjct: 174 HYAAPELLNQNGY---DESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGXKYY--STAVDIWSLGCIFAEMVTRRALF 204
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 31/230 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y +V+ IG G F L+ Q + A+ K I G + RE+ +H++ HPN
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAV-KYIERGEKIDENVKREIINHRSLRHPN 76
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +V+ Y G L R S + F +
Sbjct: 77 IVRFKEVILT---------PTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQ 123
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV-VKVCGSAEAQNLQ 203
+ V H + AHRDLK N LL GS AP + + G ++A L
Sbjct: 124 LISGVSYAH---AMQVAHRDLKLENTLLD----------GSPAPRLKIADFGYSKASVLH 170
Query: 204 DVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
P Y APE+ Y + DVWS G LY M PF+
Sbjct: 171 SQPKSAVGTPAYIAPEVLLKKEYD--GKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 140
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 196
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 197 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 242
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 243 -------IVSGKVRFP 251
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+ + I +G+G F V L +K ALK + E + Q REVE H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L + + +++V ++L Y P GT+ +L+ S ++ I ++
Sbjct: 68 PNILRLYGY---------FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL- 117
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
A+ H K I HRD+K N+LL + + D G SV AP+ + +CG+
Sbjct: 118 ---ANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT-- 169
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ Y PE+ + D++ D+WSLG L Y K PF+
Sbjct: 170 -------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 28/251 (11%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGRE-DQAQAIREVEHHKTFVHPNILPLLDHA 92
+G GGF V ++ YA+K+I RE + + +REV+ HP I+ +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 93 LTGCADPVLNSTSQ---VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L L +S + + + K L + + R + SV L +FL+I EAV
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV-CLHIFLQIAEAV 131
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVA-------PAVVKVCGSAEAQNL 202
+ H HRDLK +N+ D+ + D G V V A A++
Sbjct: 132 EFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVA 262
V + Y +PE H +SY + D++SLG +L+ + Y PF T ER V
Sbjct: 189 GQVGTKL----YMSPEQIHGNSYS---HKVDIFSLGLILFELLY---PFSTQMER---VR 235
Query: 263 LAVISGNITFP 273
N+ FP
Sbjct: 236 TLTDVRNLKFP 246
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 95/248 (38%), Gaps = 34/248 (13%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GR 64
NL FQ C++ +D Y + E++G+G FS V + YA K I
Sbjct: 17 NLYFQXMATCTR-----FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 65 EDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
D + RE + HPNI+ L D ++ +V G L D+
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHDS---------ISEEGFHYLVFDLVTGGELFEDI- 121
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + Y S D +I E+V H + HRDLK N+LLA+ + L
Sbjct: 122 ---VAREYYSEADASHCIHQILESVNHIHQHDIV---HRDLKPENLLLASKCKGAAVKLA 175
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
A+ E Q Q P Y +PE+ D Y + D+W+ G +LY
Sbjct: 176 DFGLAI-------EVQGEQQAWFGFAGTPGYLSPEVLRKDPY---GKPVDIWACGVILYI 225
Query: 244 MCYFKSPF 251
+ PF
Sbjct: 226 LLVGYPPF 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++E+EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKEIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 42/264 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFV 81
SD+Y +G+G F V L + T + A+K K + D+ +REV+ K
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HPNI L + +V Y G L +++ + + S VD ++
Sbjct: 85 HPNIXKLYE---------FFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARI 131
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLL---ANDNNPLLMDLGSVAPAVVKVCGSAE 198
++ + H K + HRDLK N+LL + D N ++D G S
Sbjct: 132 IRQVLSGITYXHKNKIV---HRDLKPENLLLESKSKDANIRIIDFGL----------STH 178
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
+ + + + Y APE+ H D++ DVWS G +LY + PF+ E
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY- 233
Query: 259 DSVALAVISGNITFPENTPFPQYQ 282
+ V G TF PQ++
Sbjct: 234 -DILKKVEKGKYTF----ELPQWK 252
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 17 SKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIR 72
+E +Y + +KY +EK+GEG + V + SQ + ALK+I ++ + AIR
Sbjct: 10 GRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIR 68
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K HPNI+ L+D V++S + +V + K L L+ G
Sbjct: 69 EISLLKELHHPNIVSLID---------VIHSERCLTLVFEFMEK-DLKKVLDENKTG--- 115
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I ++ V H + + HRDLK N+L+ +D L D G
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRIL---HRDLKPQNLLINSDGALKLADFG-------- 164
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A ++ E ++ YRAP+ L Y D+WS+GC+ M K F
Sbjct: 165 -LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST---SVDIWSIGCIFAEMITGKPLF 220
Query: 252 DTVYERGDSVALAVISGNITFPENTPFPQYQ 282
V D L I + P +PQ Q
Sbjct: 221 PGV---TDDDQLPKIFSILGTPNPREWPQVQ 248
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 43/236 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + IV +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL + ++ + ++ ++L + P+G L +L+ KH F
Sbjct: 74 PNILRMYNY---------FHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATF 119
Query: 143 LK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSA 197
++ + +A+ H+ K I HRD+K N+L+ + D G SV AP++ + +CG+
Sbjct: 120 MEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ Y PE+ ++ D++ D+W G L Y PFD+
Sbjct: 177 D---------------YLPPEMIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 37/262 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
+K++ Y +V+ IG G F V L+ H T+K YA+K K R D A E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
P ++ L + MV+ Y P G L N MS+ D+
Sbjct: 131 ANSPWVVQLF---------YAFQDDRYLYMVMEYMPGGDLVN----------LMSNYDVP 171
Query: 140 KMFLKI--CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ + + E V + + HRD+K N+LL + L D G+ C
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT--------CMKM 223
Query: 198 EAQNLQDVAAERCSMPYRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
+ + + Y +PE+ D Y + D WS+G LY M +PF
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 255 YERGDSVALAVISGNITFPENT 276
G + ++TFP++
Sbjct: 282 SLVGTYSKIMNHKNSLTFPDDN 303
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 2 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 61 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + + G SV AP+
Sbjct: 112 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSR 164
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 165 RTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 206
Query: 250 PFD 252
PF+
Sbjct: 207 PFE 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 37/262 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
+K++ Y +V+ IG G F V L+ H T+K YA+K K R D A E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
P ++ L + MV+ Y P G L N MS+ D+
Sbjct: 131 ANSPWVVQLF---------YAFQDDRYLYMVMEYMPGGDLVN----------LMSNYDVP 171
Query: 140 KMFLKI--CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ + + E V + + HRD+K N+LL + L D G+ C
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT--------CMKM 223
Query: 198 EAQNLQDVAAERCSMPYRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
+ + + Y +PE+ D Y + D WS+G LY M +PF
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 255 YERGDSVALAVISGNITFPENT 276
G + ++TFP++
Sbjct: 282 SLVGTYSKIMNHKNSLTFPDDN 303
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 17 SKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIR 72
+E +Y + +KY +EK+GEG + V + SQ + ALK+I ++ + AIR
Sbjct: 10 GRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIR 68
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K HPNI+ L+D V++S + +V + K L L+ G
Sbjct: 69 EISLLKELHHPNIVSLID---------VIHSERCLTLVFEFMEK-DLKKVLDENKTG--- 115
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I ++ V H + + HRDLK N+L+ +D L D G
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRIL---HRDLKPQNLLINSDGALKLADFG-------- 164
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A ++ E ++ YRAP+ L Y D+WS+GC+ M K F
Sbjct: 165 -LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST---SVDIWSIGCIFAEMITGKPLF 220
Query: 252 DTVYERGDSVALAVISGNITFPENTPFPQYQ 282
V D L I + P +PQ Q
Sbjct: 221 PGV---TDDDQLPKIFSILGTPNPREWPQVQ 248
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 43/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G L SK + + + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GPLGSKRQWTL--EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSRF 109
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL ++ + D G SV A
Sbjct: 110 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 163 PSSRRTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 204
Query: 246 YFKSPFD 252
PF+
Sbjct: 205 VGMPPFE 211
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 80
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE---- 189
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 190 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 235
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 236 -------IVSGKVRFP 244
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIRE 73
SK+ + D + I +G+G F V L Q+K ALK + E + Q RE
Sbjct: 3 SKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYM 133
VE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 62 VEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVV 191
++ I ++ A+ H + I HRD+K N+LL + + + G SV AP+
Sbjct: 113 TATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSR 165
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ +CG+ + Y PE+ + D++ D+WSLG L Y K
Sbjct: 166 RTTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFLVGKP 207
Query: 250 PFD 252
PF+
Sbjct: 208 PFE 210
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L+ DL K +M + + + L
Sbjct: 64 NIVKLLD---------VIHTENKLYLVFEF-----LSMDL------KKFMDASALTGIPL 103
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 104 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG---------LARA 153
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 37/262 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
+K++ Y +V+ IG G F V L+ H T+K YA+K K R D A E +
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
P ++ L + MV+ Y P G L N MS+ D+
Sbjct: 126 ANSPWVVQLF---------YAFQDDRYLYMVMEYMPGGDLVN----------LMSNYDVP 166
Query: 140 KMFLKI--CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ + + E V + + HRD+K N+LL + L D G+ C
Sbjct: 167 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT--------CMKM 218
Query: 198 EAQNLQDVAAERCSMPYRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
+ + + Y +PE+ D Y + D WS+G LY M +PF
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVGDTPFYAD 276
Query: 255 YERGDSVALAVISGNITFPENT 276
G + ++TFP++
Sbjct: 277 SLVGTYSKIMNHKNSLTFPDDN 298
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L+ DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEF-----LSMDL------KKFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTF 80
V + + VEKIGEG + V + T + ALKKI + + AIRE+ K
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HPNI+ LLD V+++ +++ +V + L DL K +M + +
Sbjct: 64 NHPNIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTG 103
Query: 141 MFLKICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC 194
+ L + ++ +F + +A+ HRDLK N+L+ + L D G
Sbjct: 104 IPLPLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------L 153
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
A ++ E ++ YRAPE+ Y D+WSLGC+ M ++ F
Sbjct: 154 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGD 211
Query: 255 YERGDSVALAVISGN---ITFPENTPFPQYQ 282
E + G + +P T P Y+
Sbjct: 212 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 43/247 (17%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQ 69
G L SK + + + I +G+G F V L Q+K ALK + E + Q
Sbjct: 1 GPLGSKRQWTL--EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ 58
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
REVE HPNIL L + + ++V ++L Y P GT+ +L+ S
Sbjct: 59 LRREVEIQSHLRHPNILRLYGY---------FHDATRVYLILEYAPLGTVYRELQKLSRF 109
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-A 187
++ I ++ A+ H + I HRD+K N+LL ++ + D G SV A
Sbjct: 110 DEQRTATYITEL----ANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 188 PAVVK--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
P+ + +CG+ + Y PE+ + D++ D+WSLG L Y
Sbjct: 163 PSSRRDTLCGT---------------LDYLPPEMIEGRMH---DEKVDLWSLGVLCYEFL 204
Query: 246 YFKSPFD 252
PF+
Sbjct: 205 VGMPPFE 211
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 64 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 103
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 104 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 153
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 154 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V SD Y + E IG G +S H T YA+ K+I + D ++ I + + H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILLRYGQ--H 80
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D V + V +V G L + + LR + + S + +
Sbjct: 81 PNIITLKD---------VYDDGKHVYLVTELMRGGELLDKI-LR---QKFFSEREASFVL 127
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
I + V+ H HRDLK +N+L ++ S P +++C A+ L
Sbjct: 128 HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDE---------SGNPECLRICDFGFAKQL 175
Query: 203 Q---DVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + C + + APE+ Y D+ D+WSLG LLY M +PF
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGY---DEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L+ DL K +M + + + L
Sbjct: 65 NIVKLLD---------VIHTENKLYLVFEF-----LSMDL------KDFMDASALTGIPL 104
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 105 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 154
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 65 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 104
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 105 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 154
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 70 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 109
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 110 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 159
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F
Sbjct: 160 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L+ DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEF-----LSMDL------KDFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 67 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 106
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 107 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 156
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 157 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 215 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 64 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 103
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 104 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 153
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T +A+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 64 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 103
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 104 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG---------LARA 153
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 64 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 103
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 104 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 153
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 65 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 104
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 105 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG---------LARA 154
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V SD Y + E IG G +S H T YA+ K+I + D ++ I + + H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-KVIDKSKRDPSEEIEILLRYGQ--H 80
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D V + V +V G L + + LR + + S + +
Sbjct: 81 PNIITLKD---------VYDDGKHVYLVTELMRGGELLDKI-LR---QKFFSEREASFVL 127
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
I + V+ H HRDLK +N+L ++ S P +++C A+ L
Sbjct: 128 HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDE---------SGNPECLRICDFGFAKQL 175
Query: 203 Q---DVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + C + + APE+ Y D+ D+WSLG LLY M +PF
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGY---DEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 65 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 104
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 105 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 154
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KTFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y P G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 105/262 (40%), Gaps = 45/262 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIREVEH-------- 76
+ Y E +G G S V H T K YA+K I + G A+ ++E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 77 -HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
K HPNI+ L D + + +V KG L + L K +S
Sbjct: 64 LRKVSGHPNIIQLKD---------TYETNTFFFLVFDLMKKGELFDYL----TEKVTLSE 110
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
+ K+ + E + H + HRDLK N+LL +D N L D G C
Sbjct: 111 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF-------SCQ 160
Query: 196 SAEAQNLQDVAAERCSMP-YRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ L++V C P Y APE+ D++ + D+WS G ++Y + PF
Sbjct: 161 LDPGEKLREV----CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
Query: 252 DTVYERGDSVALAVI-SGNITF 272
+ R + L +I SGN F
Sbjct: 217 ---WHRKQMLMLRMIMSGNYQF 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 94/238 (39%), Gaps = 33/238 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD+Y V+ IG G F L+ TK+ A+ K I G RE+ +H++ HPN
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAV-KYIERGAAIDENVQREIINHRSLRHPN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ + LT + + +++ Y G L R S + F +
Sbjct: 78 IVRFKEVILT---------PTHLAIIMEYASGGELYE----RICNAGRFSEDEARFFFQQ 124
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNL 202
+ V H + HRDLK N LL GS AP +K+C G +++ L
Sbjct: 125 LLSGVSYCHSMQ---ICHRDLKLENTLLD----------GSPAPR-LKICDFGYSKSSVL 170
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
P Y APE+ Y + DVWS G LY M PF+ E D
Sbjct: 171 HSQPKSTVGTPAYIAPEVLLRQEYD--GKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 47/270 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS-------V 136
NI+ LLD V+++ +++ +V + L DL K +M + +
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 137 DILKMFL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++K +L ++ + + H + + HRDLK N+L+ + L D G
Sbjct: 103 PLIKSYLFQLLQGLSFCHSHRVL---HRDLKPQNLLINTEGAIKLADFG---------LA 150
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVY 255
A ++ E ++ YRAPE+ Y D+WSLGC+ M ++ F
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 256 ERGDSVALAVISGN---ITFPENTPFPQYQ 282
E + G + +P T P Y+
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 105/262 (40%), Gaps = 45/262 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIREVEH-------- 76
+ Y E +G G S V H T K YA+K I + G A+ ++E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 77 -HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
K HPNI+ L D + + +V KG L + L K +S
Sbjct: 77 LRKVSGHPNIIQLKD---------TYETNTFFFLVFDLMKKGELFDYL----TEKVTLSE 123
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
+ K+ + E + H + HRDLK N+LL +D N L D G C
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF-------SCQ 173
Query: 196 SAEAQNLQDVAAERCSMP-YRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ L++V C P Y APE+ D++ + D+WS G ++Y + PF
Sbjct: 174 LDPGEKLREV----CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 252 DTVYERGDSVALAVI-SGNITF 272
+ R + L +I SGN F
Sbjct: 230 ---WHRKQMLMLRMIMSGNYQF 248
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KDFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ + +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
++ + S + MVL Y P G + + LR +G+
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 39/255 (15%)
Query: 1 MNTMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII 60
M T+G++ I Q + ++ +D Y + E IG G +S H T +A+K II
Sbjct: 1 MQTVGVHSIVQQ---LHRNSIQF-TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVK-II 55
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
+ D + I + + HPNI+ L D V + V +V G L
Sbjct: 56 DKSKRDPTEEIEILLRYGQ--HPNIITLKD---------VYDDGKYVYVVTELMKGGELL 104
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
+ + LR + + S + + I + V+ H HRDLK +N+L ++
Sbjct: 105 DKI-LR---QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDE----- 152
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQ---DVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWS 236
S P +++C A+ L+ + C + + APE+ Y D D+WS
Sbjct: 153 ----SGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY---DAACDIWS 205
Query: 237 LGCLLYAMCYFKSPF 251
LG LLY M +PF
Sbjct: 206 LGVLLYTMLTGYTPF 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 34/237 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
SD + + ++G G S V + T+K YALK + D+ E+ HPN
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALK--VLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + + + +++ +VL G L + R V K Y S D +
Sbjct: 110 IIKLKE---------IFETPTEISLVLELVTGGELFD----RIVEKGYYSERDAADAVKQ 156
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I EAV H+ HRDLK N+L A AP + G ++ Q
Sbjct: 157 ILEAVAYLHEN---GIVHRDLKPENLLYATP--------APDAPLKIADFGLSKIVEHQV 205
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYA-MCYFKSPFDTVYERGD 259
+ C P Y APE+ C D+WS+G + Y +C F+ +D ERGD
Sbjct: 206 LMKTVCGTPGYCAPEILR---GCAYGPEVDMWSVGIITYILLCGFEPFYD---ERGD 256
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 45/262 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIREVEH-------- 76
+ Y E +G G S V H T K YA+K I + G A+ ++E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 77 -HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
K HPNI+ L D + + +V KG L + L K +S
Sbjct: 77 LRKVSGHPNIIQLKD---------TYETNTFFFLVFDLMKKGELFDYL----TEKVTLSE 123
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
+ K+ + E + H + HRDLK N+LL +D N L D G C
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF-------SCQ 173
Query: 196 SAEAQNLQDVAAERCSMP-YRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ L+ V C P Y APE+ D++ + D+WS G ++Y + PF
Sbjct: 174 LDPGEKLRSV----CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 252 DTVYERGDSVALAVI-SGNITF 272
+ R + L +I SGN F
Sbjct: 230 ---WHRKQMLMLRMIMSGNYQF 248
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
LD L G ++ +V+ Y G+L + V + M I + +
Sbjct: 81 NYLDSYLVG---------DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECL 126
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+A++ H + I HRD+K+ N+LL D + L D G C + Q
Sbjct: 127 QALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFG--------FCAQITPE--QSKR 173
Query: 207 AERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+E PY APE+ +Y + D+WSLG + M + P+
Sbjct: 174 SEMVGTPYWMAPEVVTRKAY---GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 168
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V A +CG+ E
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE---- 224
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 225 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 270
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 271 -------IVSGKVRFP 279
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 43/236 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL + ++ + ++ ++L + P+G L +L+ KH F
Sbjct: 74 PNILRMYNY---------FHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATF 119
Query: 143 LK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSA 197
++ + +A+ H+ K I HRD+K N+L+ + D G SV AP++ + +CG+
Sbjct: 120 MEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ Y PE+ ++ D++ D+W G L Y PFD+
Sbjct: 177 D---------------YLPPEMIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 43/236 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L Q K ALK + E + Q RE+E H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL + ++ + ++ ++L + P+G L +L+ KH F
Sbjct: 75 PNILRMYNY---------FHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATF 120
Query: 143 LK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSA 197
++ + +A+ H+ K I HRD+K N+L+ + D G SV AP++ + +CG+
Sbjct: 121 MEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 177
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ Y PE+ ++ D++ D+W G L Y PFD+
Sbjct: 178 D---------------YLPPEMIEGKTH---DEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 63 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 102
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 103 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 152
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 153 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + AL KI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + L DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEF-----LHQDL------KKFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYTHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + + DL K +M + + + L
Sbjct: 66 NIVKLLD---------VIHTENKLYLVFEH-----VDQDL------KKFMDASALTGIPL 105
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 106 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 155
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 63/276 (22%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH-HKTFVHPNILPLLD 90
E +GEG ++ V Q K YA+K I +++ REVE ++ + NIL L++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
++ +V G++ ++ + KH+ + + ++ + A+
Sbjct: 79 ---------FFEDDTRFYLVFEKLQGGSILAHIQKQ---KHF-NEREASRVVRDVAAALD 125
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDN--NPLLM---DLGS-----------VAPAVVKVC 194
H AHRDLK N+L + +P+ + DLGS P + C
Sbjct: 126 FLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMCYFKSPF- 251
GSAE Y APE+ V D D+R D+WSLG +LY M PF
Sbjct: 183 GSAE---------------YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
Query: 252 -----DTVYERGDSVAL-------AVISGNITFPEN 275
D ++RG+ + ++ G FP+
Sbjct: 228 GHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK 263
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 100/255 (39%), Gaps = 38/255 (14%)
Query: 26 DKYYIVEK-IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + + + +V+ G L R V K D ++
Sbjct: 68 IIRLYE---------TFEDNTDIYLVMELCTGGELFE----RVVHKRVFRESDAARIMKD 114
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLAND--NNPL-LMDLGSVAPAVVKVCGSAEAQN 201
+ AV H + AHRDLK N L D ++PL L+D G A
Sbjct: 115 VLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-----------RFK 160
Query: 202 LQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
+ + PY +P++ + D WS G ++Y + PF +
Sbjct: 161 PGKMMRTKVGTPYYVSPQVLE----GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD--XE 214
Query: 261 VALAVISGNITFPEN 275
V L + G TFPE
Sbjct: 215 VMLKIREGTFTFPEK 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 100/255 (39%), Gaps = 38/255 (14%)
Query: 26 DKYYIVEK-IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
++YY +E IG G + V + T+ R A KKI + ED + +E+E K+ HPN
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L + + + +V+ G L R V K D ++
Sbjct: 85 IIRLYE---------TFEDNTDIYLVMELCTGGELFE----RVVHKRVFRESDAARIMKD 131
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLAND--NNPL-LMDLGSVAPAVVKVCGSAEAQN 201
+ AV H + AHRDLK N L D ++PL L+D G A
Sbjct: 132 VLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-----------RFK 177
Query: 202 LQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
+ + PY +P++ + D WS G ++Y + PF +
Sbjct: 178 PGKMMRTKVGTPYYVSPQVLE----GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD--XE 231
Query: 261 VALAVISGNITFPEN 275
V L + G TFPE
Sbjct: 232 VMLKIREGTFTFPEK 246
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
+ + VEKIGEG + V + T + ALKKI + + AIRE+ K HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ LLD V+++ +++ +V + + DL K +M + + + L
Sbjct: 62 NIVKLLD---------VIHTENKLYLVFEH-----VHQDL------KTFMDASALTGIPL 101
Query: 144 KICEAVKVFHDAKPIAY------AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ ++ +F + +A+ HRDLK N+L+ + L D G A
Sbjct: 102 PLIKSY-LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------LARA 151
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
++ E ++ YRAPE+ Y D+WSLGC+ M ++ F E
Sbjct: 152 FGVPVRTYTHEVVTLWYRAPEILLGCKYY--STAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 258 GDSVALAVISGN---ITFPENTPFPQYQ 282
+ G + +P T P Y+
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 46/280 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIRE 73
K+ + +Y V +IGEG + V + R+ ALK++ E+ IRE
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 74 V---EHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE--LRSV 128
V H +TF HPN++ L D C + +++ +V + + DL L V
Sbjct: 62 VAVLRHLETFEHPNVVRLFD----VCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKV 112
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---- 184
+ + + I M ++ + H + + HRDLK N+L+ + L D G
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVV---HRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 185 -SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
S A+ V ++ YRAPE+ SY D+WS+GC+
Sbjct: 170 YSFQMALTSVV---------------VTLWYRAPEVLLQSSYATP---VDLWSVGCIFAE 211
Query: 244 MCYFKSPF---DTVYERGDSVALAVISGNITFPENTPFPQ 280
M K F V + G + + + G +P + P+
Sbjct: 212 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 36/274 (13%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIREV 74
K+ + +Y V +IGEG + V + R+ ALK++ E+ IREV
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 75 ---EHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE--LRSVG 129
H +TF HPN++ L D C + +++ +V + + DL L V
Sbjct: 63 AVLRHLETFEHPNVVRLFD----VCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVP 113
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
+ + + I M ++ + H + + HRDLK N+L+ + L D G
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVV---HRDLKPQNILVTSSGQIKLADFG----- 165
Query: 190 VVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
+ ++ A + + ++ YRAPE+ SY D+WS+GC+ M K
Sbjct: 166 LARIYSFQMA-----LTSVVVTLWYRAPEVLLQSSYATP---VDLWSVGCIFAEMFRRKP 217
Query: 250 PF---DTVYERGDSVALAVISGNITFPENTPFPQ 280
F V + G + + + G +P + P+
Sbjct: 218 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRY-ALKKIICHGREDQA--QAIRE 73
K+ + +Y V +IGEG + V + R+ ALK++ E+ IRE
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 74 V---EHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE--LRSV 128
V H +TF HPN++ L D C + +++ +V + + DL L V
Sbjct: 62 VAVLRHLETFEHPNVVRLFD----VCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKV 112
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
+ + + I M ++ + H + + HRDLK N+L+ + L D G
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVV---HRDLKPQNILVTSSGQIKLADFG---- 165
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
+ ++ A + + ++ YRAPE+ SY D+WS+GC+ M K
Sbjct: 166 -LARIYSFQMA-----LTSVVVTLWYRAPEVLLQSSYATP---VDLWSVGCIFAEMFRRK 216
Query: 249 SPF---DTVYERGDSVALAVISGNITFPENTPFPQ 280
F V + G + + + G +P + P+
Sbjct: 217 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H +T YA+K + + + ++++EH T I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILP 87
++E +G+G + V S + A+K D+ RE E + T + H NIL
Sbjct: 41 LLECVGKGRYGEV--WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILG 95
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
+ +T +S++Q+ ++ Y+ G+L + L+L + + +V L++ L I
Sbjct: 96 FIASDMTS-----RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIAS 145
Query: 148 AVKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ H KP A AHRDLK+ N+L+ + + DLG +A + + N
Sbjct: 146 GLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLG-LAVMHSQSTNQLDVGN 203
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
V +R P E VD + +R D+W+ G +L+
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLW 243
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ I+ +G G F V LI + YA+K + +++ +++VEH T +L
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL----KKEIVVRLKQVEH--TNDERLMLS 61
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS-----VGKHYMSSVDILKMF 142
++ H Q+ M++ Y G L + L V K Y + V
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV------ 115
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
C A++ H +K I Y RDLK N+LL + + + D G A+ +
Sbjct: 116 ---CLALEYLH-SKDIIY--RDLKPENILLDKNGHIKITDFGF-------------AKYV 156
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
DV C P Y APE+ Y ++ D WS G L+Y M +PF
Sbjct: 157 PDVTYXLCGTPDYIAPEVVSTKPY---NKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILP 87
++E +G+G + V S + A+K D+ RE E + T + H NIL
Sbjct: 12 LLECVGKGRYGEV--WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILG 66
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
+ +T +S++Q+ ++ Y+ G+L + L+L + + +V L++ L I
Sbjct: 67 FIASDMTS-----RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIAS 116
Query: 148 AVKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ H KP A AHRDLK+ N+L+ + + DLG +A + + N
Sbjct: 117 GLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLG-LAVMHSQSTNQLDVGN 174
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
V +R P E VD + +R D+W+ G +L+
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLW 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 29/230 (12%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D ++ +V G L D+ V + Y S D
Sbjct: 63 PNIVRLHDS---------ISEEGFHYLVFDLVTGGELFEDI----VAREYYSEADASHCI 109
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+I E+V H HRDLK N+LLA+ + + L A+ E Q
Sbjct: 110 QQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAI-------EVQGD 159
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Q P Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPY---GKPVDMWACGVILYILLVGYPPF 206
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILP 87
++E +G+G + V S + A+K D+ RE E + T + H NIL
Sbjct: 12 LLECVGKGRYGEV--WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILG 66
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
+ +T +S++Q+ ++ Y+ G+L + L+L + + +V L++ L I
Sbjct: 67 FIASDMTS-----RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIAS 116
Query: 148 AVKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ H KP A AHRDLK+ N+L+ + + DLG +A + + N
Sbjct: 117 GLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLG-LAVMHSQSTNQLDVGN 174
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
V +R P E VD + +R D+W+ G +L+
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLW 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 103/270 (38%), Gaps = 37/270 (13%)
Query: 20 AVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEH 76
+ +K++ Y +V+ IG G F V L+ H ++K YA+K K R D A E +
Sbjct: 69 GLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
P ++ L CA + MV+ Y P G L N MS+
Sbjct: 129 MAFANSPWVVQLF------CA---FQDDKYLYMVMEYMPGGDLVN----------LMSNY 169
Query: 137 DILKMFLKI--CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC 194
D+ + + K E V + HRD+K N+LL + L D G+ C
Sbjct: 170 DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGT--------C 221
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHV---DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y +PE+ D Y + D WS+G L+ M +PF
Sbjct: 222 MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGY--YGRECDWWSVGVFLFEMLVGDTPF 279
Query: 252 DTVYERGDSVALAVISGNITFPENTPFPQY 281
G + ++ FPE+ ++
Sbjct: 280 YADSLVGTYSKIMDHKNSLCFPEDAEISKH 309
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ--AQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP---KGTLANDLELRSVGKHYMSSVD-ILK 140
++ L++ T A P + + +V + G L+N L K +S + +++
Sbjct: 79 VVNLIEICRTK-ASPYNRCKASIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQ 132
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
M L + H K + HRD+K ANVL+ D L D G + + A+
Sbjct: 133 MLL---NGLYYIHRNKIL---HRDMKAANVLITRDGVLKLADFG-----LARAFSLAKNS 181
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQR-----TDVWSLGCLLYAMCYFKSPFDTVY 255
++ YR PEL ++ +R D+W GC++ M + +SP +
Sbjct: 182 QPNRYXNRVVTLWYRPPEL-------LLGERDYGPPIDLWGAGCIMAEM-WTRSPI--MQ 231
Query: 256 ERGDSVALAVIS---GNITFPENTP 277
+ LA+IS G+IT PE P
Sbjct: 232 GNTEQHQLALISQLCGSIT-PEVWP 255
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 146
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A + A
Sbjct: 147 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANSFVGTAQ------ 196
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 197 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 251
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 252 EKF-FPK 257
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 115
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY-----A 168
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 224
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 225 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 270
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 271 -------IVSGKVRFP 279
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 29/230 (12%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E++G+G FS V T + YA K I D + RE + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D ++ +V G L D+ V + Y S D
Sbjct: 63 PNIVRLHDS---------ISEEGFHYLVFDLVTGGELFEDI----VAREYYSEADASHCI 109
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+I E+V H HRDLK N+LLA+ + + L A+ E Q
Sbjct: 110 QQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAI-------EVQGD 159
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Q P Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPY---GKPVDMWACGVILYILLVGYPPF 206
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 37/238 (15%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED-----QAQAIREVE 75
V ++ +Y ++ +GEG F+TV T + A+KKI R + A+RE++
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
+ HPNI+ LLD S + +V + + DLE+ + +
Sbjct: 65 LLQELSHPNIIGLLD---------AFGHKSNISLVFDF-----METDLEVIIKDNSLVLT 110
Query: 136 VDILKMF-LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC 194
+K + L + ++ H + HRDLK N+LL + L D G + K
Sbjct: 111 PSHIKAYMLMTLQGLEYLHQHWIL---HRDLKPNNLLLDENGVLKLADFG-----LAKSF 162
Query: 195 GSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
GS V YRAPE LF Y V D+W++GC+L A + PF
Sbjct: 163 GSPNRAYXHQVVTRW----YRAPELLFGARMYGV---GVDMWAVGCIL-AELLLRVPF 212
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 89
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY-----A 142
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 198
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 199 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 244
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 245 -------IVSGKVRFP 253
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 148
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 251 -------IVSGKVRFP 259
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 44/253 (17%)
Query: 13 GCLCSKEAVYVKS---DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGR 64
G E +Y +S D Y + E++G G F+ V T K YA K ++ R
Sbjct: 10 GVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRR 69
Query: 65 EDQAQAI-REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL 123
+ I REV + HPNI+ L D + + + V+++L G L + L
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHD---------IFENKTDVVLILELVSGGELFDFL 120
Query: 124 ELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----L 179
K ++ + + +I + V H + AH DLK N++L + N P
Sbjct: 121 ----AEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIK 173
Query: 180 LMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLG 238
L+D G K+ E +N+ P + APE+ +Y + D+WS+G
Sbjct: 174 LIDFGIAH----KIEAGNEFKNI-------FGTPEFVAPEIV---NYEPLGLEADMWSIG 219
Query: 239 CLLYAMCYFKSPF 251
+ Y + SPF
Sbjct: 220 VITYILLSGASPF 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ--AQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP---KGTLANDLELRSVGKHYMSSVD-ILK 140
++ L++ T A P + +V + G L+N L K +S + +++
Sbjct: 79 VVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQ 132
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
M L + H K + HRD+K ANVL+ D L D G + + A+
Sbjct: 133 MLL---NGLYYIHRNKIL---HRDMKAANVLITRDGVLKLADFG-----LARAFSLAKNS 181
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQR-----TDVWSLGCLLYAMCYFKSPFDTVY 255
++ YR PEL ++ +R D+W GC++ M + +SP +
Sbjct: 182 QPNRYXNRVVTLWYRPPEL-------LLGERDYGPPIDLWGAGCIMAEM-WTRSPI--MQ 231
Query: 256 ERGDSVALAVIS---GNITFPENTP 277
+ LA+IS G+IT PE P
Sbjct: 232 GNTEQHQLALISQLCGSIT-PEVWP 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
LD L G ++ +V+ Y G+L + V + M I + +
Sbjct: 81 NYLDSYLVG---------DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECL 126
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+A++ H + I HRD+K+ N+LL D + L D G C + Q
Sbjct: 127 QALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFG--------FCAQITPE--QSKR 173
Query: 207 AERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ PY APE+ +Y + D+WSLG + M + P+
Sbjct: 174 STMVGTPYWMAPEVVTRKAY---GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
+D Y + E IG G +S H T +A+K II + D + I + + HPN
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVK-IIDKSKRDPTEEIEILLRYGQ--HPN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D V + V +V G L + + LR + + S + +
Sbjct: 78 IITLKD---------VYDDGKYVYVVTELXKGGELLDKI-LR---QKFFSEREASAVLFT 124
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ- 203
I + V+ H HRDLK +N+L ++ S P +++C A+ L+
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDE---------SGNPESIRICDFGFAKQLRA 172
Query: 204 --DVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C + + APE+ Y D D+WSLG LLY +PF
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGY---DAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
LD L G ++ +V+ Y G+L + V + M I + +
Sbjct: 82 NYLDSYLVG---------DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECL 127
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+A++ H + I HRD+K+ N+LL D + L D G C + Q
Sbjct: 128 QALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFG--------FCAQITPE--QSKR 174
Query: 207 AERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ PY APE+ +Y + D+WSLG + M + P+
Sbjct: 175 SXMVGTPYWMAPEVVTRKAY---GPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 150
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A + A
Sbjct: 151 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANSFVGTAQ------ 200
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 201 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 255
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 256 EKF-FPK 261
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP---KGTLANDLELRSVGKHYMSSVD-ILK 140
++ L++ T A P + +V + G L+N L K +S + +++
Sbjct: 78 VVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQ 131
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
M L + H K + HRD+K ANVL+ D L D G + + A+
Sbjct: 132 MLL---NGLYYIHRNKIL---HRDMKAANVLITRDGVLKLADFG-----LARAFSLAKNS 180
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQR-----TDVWSLGCLLYAMCYFKSPFDTVY 255
++ YR PEL ++ +R D+W GC++ M + +SP +
Sbjct: 181 QPNRYXNRVVTLWYRPPEL-------LLGERDYGPPIDLWGAGCIMAEM-WTRSPI--MQ 230
Query: 256 ERGDSVALAVIS---GNITFPENTP 277
+ LA+IS G+IT PE P
Sbjct: 231 GNTEQHQLALISQLCGSIT-PEVWP 254
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ--AQAIREVEHHKTFVHPN 84
KY + KIG+G F V H +T ++ ALKK++ ++ A+RE++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYP---KGTLANDLELRSVGKHYMSSVD-ILK 140
++ L++ T A P + +V + G L+N L K +S + +++
Sbjct: 79 VVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQ 132
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
M L + H K + HRD+K ANVL+ D L D G + + A+
Sbjct: 133 MLL---NGLYYIHRNKIL---HRDMKAANVLITRDGVLKLADFG-----LARAFSLAKNS 181
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQR-----TDVWSLGCLLYAMCYFKSPFDTVY 255
++ YR PEL ++ +R D+W GC++ M + +SP +
Sbjct: 182 QPNRYXNRVVTLWYRPPEL-------LLGERDYGPPIDLWGAGCIMAEM-WTRSPI--MQ 231
Query: 256 ERGDSVALAVIS---GNITFPENTP 277
+ LA+IS G+IT PE P
Sbjct: 232 GNTEQHQLALISQLCGSIT-PEVWP 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
LD L G ++ +V+ Y G+L + V + M I + +
Sbjct: 81 NYLDSYLVG---------DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECL 126
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+A++ H + I HRD+K+ N+LL D + L D G C + Q
Sbjct: 127 QALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFG--------FCAQITPE--QSKR 173
Query: 207 AERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ PY APE+ +Y + D+WSLG + M + P+
Sbjct: 174 SXMVGTPYWMAPEVVTRKAY---GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPNI 85
Y ++ +G G + V +T + A+KK+ + + +A RE+ K H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL-K 144
+ LLD D L+ + +V+P+ GT +L + KH D ++ + +
Sbjct: 87 IGLLD---VFTPDETLDDFTDFYLVMPFM--GT-----DLGKLMKHEKLGEDRIQFLVYQ 136
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ + ++ H A I HRDLK N+ + D ++D G A ++ G
Sbjct: 137 MLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXV------- 186
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ YRAPE+ + ++ Q D+WS+GC++ M K+ F
Sbjct: 187 -----VTRWYRAPEV--ILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 81
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 134
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 190
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 191 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 236
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 237 -------IVSGKVRFP 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 146
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 147 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 196
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 197 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 251
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 252 EKF-FPK 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 131
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 132 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 181
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 182 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 236
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 237 EKF-FPK 242
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 26 DKYYIVEK---IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
+ +Y V K +G G F V E + T + A K I G +D+ + E+ H
Sbjct: 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH 145
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY-MSSVDILKM 141
N++ L D S + +++V+ Y G L + R + + Y ++ +D +
Sbjct: 146 ANLIQLYD---------AFESKNDIVLVMEYVDGGELFD----RIIDESYNLTELDTILF 192
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ICE ++ H + H DLK N+L N + +K+ A+
Sbjct: 193 MKQICEGIRHMH---QMYILHLDLKPENILCVNRD-----------AKQIKIIDFGLARR 238
Query: 202 LQDVAAERCSMPYRAPELF--HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ E+ + + PE V +Y V TD+WS+G + Y + SPF
Sbjct: 239 YK--PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 124
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 125 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 174
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 175 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 229
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 230 EKF-FPK 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 125
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 126 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 175
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 176 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 230
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 231 EKF-FPK 236
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 18/235 (7%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K F H NI+ + + + ++V ++ + + DL R + +S
Sbjct: 63 LKHFKHENIITIFNIQRPDS----FENFNEVYII-----QELMQTDLH-RVISTQMLSDD 112
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
I + AVKV H + I HRDLK +N+L+ ++ + + D G +
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 197 AEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+E Q E + YRAPE+ + + DVWS GC+L A + + P
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAK--YSRAMDVWSCGCIL-AELFLRRP 221
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 147
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 148 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 197
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 198 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 252
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 253 EKF-FPK 258
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 13 GCLCSKEAVYVKS-DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-- 69
G E +Y +S +KY + +GEG + V + T + A+KK + + +
Sbjct: 11 GVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI 70
Query: 70 AIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
A+RE++ K H N++ LL+ V + +V + T+ +DLEL G
Sbjct: 71 AMREIKLLKQLRHENLVNLLE---------VCKKKKRWYLVFEFVDH-TILDDLELFPNG 120
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
Y + K +I + H I HRD+K N+L++ L D G
Sbjct: 121 LDYQV---VQKYLFQIINGIGFCHSHNII---HRDIKPENILVSQSGVVKLCDFGFARTL 174
Query: 190 VVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + D A R YRAPEL D + DVW++GCL+ M
Sbjct: 175 ------AAPGEVYDDEVATRW---YRAPELLVGD--VKYGKAVDVWAIGCLVTEM 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 45/261 (17%)
Query: 7 NLIFQ--MG-CLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHS----QTKKRYALKKI 59
NL FQ MG ++ + ++++G+G F +V + + T + A+KK+
Sbjct: 19 NLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 78
Query: 60 ICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL 119
E RE+E K+ H NI+ + + +++ Y P G+L
Sbjct: 79 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-------GRRNLKLIMEYLPYGSL 131
Query: 120 ANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL 179
+ L+ K + + +L+ +IC+ ++ + Y HRDL T N+L+ N+N
Sbjct: 132 RDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVK 185
Query: 180 LMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP------YRAPELFHVDSYCVVDQRTD 233
+ D G + KV QD + P + APE + V +D
Sbjct: 186 IGDFG-----LTKVLP-------QDKEXXKVKEPGESPIFWYAPESLTESKFSVA---SD 230
Query: 234 VWSLGCLLYAMCYF----KSP 250
VWS G +LY + + KSP
Sbjct: 231 VWSFGVVLYELFTYIEKSKSP 251
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 126
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 127 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 176
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 177 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 231
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 232 EKF-FPK 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 147
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 148 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 197
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 198 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 252
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 253 EKF-FPK 258
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 33/234 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
V D + I+ IG+G F V +++ + TKK YA+K K C R + +E++ +
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HP ++ L ++ D + MV+ G L L+ K + +
Sbjct: 72 LEHPFLVNLW-YSFQDEED--------MFMVVDLLLGGDLRYHLQQNVHFKE-----ETV 117
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD--LGSVAPAVVKVCGSA 197
K+F ICE V + HRD+K N+LL + + D + ++ P ++ A
Sbjct: 118 KLF--ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA 175
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ PY APE+F D WSLG Y + + P+
Sbjct: 176 GTK------------PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 127
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 128 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 177
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 178 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 232
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 233 EKF-FPK 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 150
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 151 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 200
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 201 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 255
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 256 EKF-FPK 261
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ EA
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA--- 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 205 ------------LAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 23/218 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 152
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 153 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 202
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y +PEL S C + +D+W+LGC++Y + PF
Sbjct: 203 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPF 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKT 79
VK Y + + +G G F V + +H T + A+K + + + RE+++ K
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HP+I+ L V+++ S + MV+ Y G L + + + +
Sbjct: 73 FRHPHIIKLYQ---------VISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESR 119
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-----SVAPAVVKVC 194
++F +I V H + HRDLK NVLL N + D G S + C
Sbjct: 120 RLFQQILSGVDYCHRHMVV---HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC 176
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
GS Y APE+ + D+WS G +LYA+ PFD
Sbjct: 177 GSPN---------------YAAPEV--ISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 147
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 148 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANAFVGTAQ------ 197
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 198 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 252
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 253 EKF-FPK 258
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 18/235 (7%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K F H NI+ + + + ++V ++ + + DL R + +S
Sbjct: 63 LKHFKHENIITIFNIQRPDS----FENFNEVYII-----QELMQTDLH-RVISTQMLSDD 112
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
I + AVKV H + I HRDLK +N+L+ ++ + + D G +
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 197 AEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+E Q E + YRAPE+ + + DVWS GC+L A + + P
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAK--YSRAMDVWSCGCIL-AELFLRRP 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQ-AQAIREVEHHKTFVHP 83
S ++ +EK+G G ++TV + T ALK++ E + AIRE+ K H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS-SVDILKMF 142
NI+ L D V+++ +++ +V + L ++ R+VG ++++K F
Sbjct: 64 NIVRLYD---------VIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 143 -LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++ + + H+ K + HRDLK N+L+ L D G + V
Sbjct: 114 QWQLLQGLAFCHENKIL---HRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-------- 162
Query: 202 LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
++E ++ YRAP+ L +Y D+WS GC+L M K F +
Sbjct: 163 -NTFSSEVVTLWYRAPDVLMGSRTYST---SIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
Query: 261 VALAVISGNIT---FPENTPFPQY 281
+ I G +P T P+Y
Sbjct: 219 KLIFDIMGTPNESLWPSVTKLPKY 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 28/239 (11%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVEHHKT 79
D Y + E IG+G FS V + +T +++A+K K RE
Sbjct: 23 EDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HP+I+ LL+ +S + MV + L ++ R+ S
Sbjct: 83 LKHPHIVELLE---------TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
+I EA++ HD I HRD+K NVLLA+ N + LG A+ +
Sbjct: 134 HYMRQILEALRYCHDNNII---HRDVKPENVLLASKENSAPVKLGDFGVAI-------QL 183
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
VA R P + APE+ + Y + DVW G +L+ + PF ER
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPY---GKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+++ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIIISKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 154
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 155 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 204
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 205 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 259
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 260 EKF-FPK 265
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQA 68
G ++ + ++++G+G F +V + + T + A+KK+ E
Sbjct: 4 GAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 63
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
RE+E K+ H NI+ + + +++ Y P G+L + L+
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH-- 114
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
K + + +L+ +IC+ ++ + Y HRDL T N+L+ N+N + D G
Sbjct: 115 -KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG---- 166
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ KV QD + P + APE + V +DVWS G +LY
Sbjct: 167 -LTKVLP-------QDKEXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 215
Query: 243 AMCYF----KSP 250
+ + KSP
Sbjct: 216 ELFTYIEKSKSP 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI----ICHGRE--DQAQAIREVEHHK 78
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 11 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPNI+ L D + + + V+++L G L + L K ++ +
Sbjct: 71 EIRHPNIITLHD---------IFENKTDVVLILELVSGGELFDFL----AEKESLTEDEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I + V H + AH DLK N++L + N P L+D G K+
Sbjct: 118 TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH----KIE 170
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 AGNEFKNI------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 28/240 (11%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-QAIREVEH 76
K VY S + + +GEG + V H T + A+KKI + A + +RE++
Sbjct: 3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K F H NI+ + + + ++V ++ + + DL R + +S
Sbjct: 63 LKHFKHENIITIFNIQRPDS----FENFNEVYII-----QELMQTDLH-RVISTQMLSDD 112
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
I + AVKV H + I HRDLK +N+L+ ++ + + D G + ++
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFG-----LARIIDE 164
Query: 197 AEAQNLQDVAAER------CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+ A N + + + YRAPE+ + + DVWS GC+L A + + P
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAK--YSRAMDVWSCGCIL-AELFLRRP 221
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQA 68
G ++ + ++++G+G F +V + + T + A+KK+ E
Sbjct: 2 GAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 61
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
RE+E K+ H NI+ + + +++ Y P G+L + L+
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH-- 112
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
K + + +L+ +IC+ ++ + Y HRDL T N+L+ N+N + D G
Sbjct: 113 -KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG---- 164
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ KV QD + P + APE + V +DVWS G +LY
Sbjct: 165 -LTKVLP-------QDKEXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 213
Query: 243 AMCYF----KSP 250
+ + KSP
Sbjct: 214 ELFTYIEKSKSP 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 80 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 129
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 130 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 174
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 175 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI----ICHGRE--DQAQAIREVEHHK 78
D Y + E++G G F+ V T K YA K I + R + + REV +
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPNI+ L D + + + V+++L G L + L K ++ +
Sbjct: 64 EIRHPNIITLHD---------IFENKTDVVLILELVSGGELFDFL----AEKESLTEDEA 110
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I + V H + AH DLK N++L + N P L+D G K+
Sbjct: 111 TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH----KIE 163
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 164 AGNEFKNIF------GTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 92 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 141
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 142 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 186
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 72 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 121
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 122 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 166
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 167 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 77 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 126
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 127 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 171
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 82
D+Y I+E IG G + VS T ++ A+KKI + + +RE++ K F H
Sbjct: 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS------SV 136
NI+ + D +L T +PY ++ L+L H + ++
Sbjct: 113 DNIIAIKD---------ILRPT------VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 137 DILKMFL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
+ ++ FL ++ +K H A+ I HRDLK +N LL N+N L +G A
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVI---HRDLKPSN-LLVNENCEL--KIGDFGMARGLCTS 211
Query: 196 SAEAQN-LQDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
AE Q + + A R YRAPEL + Y Q D+WS+GC+ M + F
Sbjct: 212 PAEHQYFMTEYVATRW---YRAPELMLSLHEYT---QAIDLWSVGCIFGEMLARRQLF 263
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 74 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 123
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 124 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 168
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 74 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 123
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 124 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 168
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 78 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 127
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 128 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 172
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 173 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 224
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 92 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 141
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 142 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 186
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 73 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 122
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 123 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 167
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 168 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
KY EKIG+G TV T + A++++ + + I E+ + +PNI+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
LD L G ++ +V+ Y G+L + V + M I + +
Sbjct: 82 NYLDSYLVG---------DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECL 127
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+A++ H + I HR++K+ N+LL D + L D G C + Q
Sbjct: 128 QALEFLHSNQVI---HRNIKSDNILLGMDGSVKLTDFG--------FCAQITPE--QSKR 174
Query: 207 AERCSMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ PY APE+ +Y + D+WSLG + M + P+
Sbjct: 175 STMVGTPYWMAPEVVTRKAY---GPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVH 82
D+Y I+E IG G + VS T ++ A+KKI + + +RE++ K F H
Sbjct: 54 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS------SV 136
NI+ + D +L T +PY ++ L+L H + ++
Sbjct: 114 DNIIAIKD---------ILRPT------VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 137 DILKMFL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
+ ++ FL ++ +K H A+ I HRDLK +N LL N+N L +G A
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVI---HRDLKPSN-LLVNENCEL--KIGDFGMARGLCTS 212
Query: 196 SAEAQN-LQDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
AE Q + + A R YRAPEL + Y Q D+WS+GC+ M + F
Sbjct: 213 PAEHQYFMTEYVATRW---YRAPELMLSLHEYT---QAIDLWSVGCIFGEMLARRQLF 264
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FST L T + YA+K + ++ I+E + +++ LDH
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 147
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 148 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 197
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S C + +D+W+LGC++Y + PF E + +I FP
Sbjct: 198 YVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 252
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 253 EKF-FPK 258
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V +CG+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y AP + Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPAIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 58/261 (22%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
S KY + + +G G F V + ++ KR+ALKK++ +D RE++ K H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVN 61
Query: 85 ILPLLDHA-LTGCADP--------------------------VLN-STSQVLMVLPYYPK 116
I+ L+D+ TG +P ++N S ++ L V+ Y
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 117 GTLANDLE--LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLAN 174
TL L+ +RS M+ + I ++ AV H + HRD+K N+L+ +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISI--YIYQLFRAVGFIHS---LGICHRDIKPQNLLVNS 176
Query: 175 DNNPLLMDLGSVAPAVVKVCGSAEAQNL---QDVAAERCSMPYRAPEL-FHVDSYCVVDQ 230
+N L K+C A+ L + A CS YRAPEL Y
Sbjct: 177 KDNTL------------KLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYT---P 221
Query: 231 RTDVWSLGCLLYAMCYFKSPF 251
D+WS+GC+ + K F
Sbjct: 222 SIDLWSIGCVFGELILGKPLF 242
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH----KTF 80
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 85
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HPNI+ L D + S +V G L D+ V + + S D
Sbjct: 86 QHPNIVRLHDS---------IQEESFHYLVFDLVTGGELFEDI----VAREFYSEADASH 132
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+I E++ H HR+LK N+LLA+ + L A+ E
Sbjct: 133 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI-------EVN 182
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 183 DSEAWHGFAGTPGYLSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPF 230
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 74 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 123
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV + + +
Sbjct: 124 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVL-PQDKEFFKVK 174
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ + APE + V +DVWS G +LY + + KSP
Sbjct: 175 EPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH----KTF 80
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 62
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HPNI+ L D + S +V G L D+ V + + S D
Sbjct: 63 QHPNIVRLHDS---------IQEESFHYLVFDLVTGGELFEDI----VAREFYSEADASH 109
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+I E++ H HR+LK N+LLA+ + L A+ E
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI-------EVN 159
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPF 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH----KTF 80
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 61
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HPNI+ L D + S +V G L D+ V + + S D
Sbjct: 62 QHPNIVRLHDS---------IQEESFHYLVFDLVTGGELFEDI----VAREFYSEADASH 108
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+I E++ H HR+LK N+LLA+ + L A+ E
Sbjct: 109 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI-------EVN 158
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 159 DSEAWHGFAGTPGYLSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPF 206
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 33/251 (13%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+KY I E +G G F V + +KK Y K + G DQ +E+ H NI
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNI 63
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L L + S +++M+ + + E + ++ +I+ ++
Sbjct: 64 LHLHES---------FESMEELVMIFEFISGLDI---FERINTSAFELNEREIVSYVHQV 111
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
CEA++ H H D++ N++ + + +K+ +A+ L+
Sbjct: 112 CEALQFLHSHN---IGHFDIRPENIIYQTRRS-----------STIKIIEFGQARQLK-- 155
Query: 206 AAERCSMPYRAPELF--HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
+ + + APE + V + VV TD+WSLG L+Y + +PF + E +
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF--LAETNQQIIE 213
Query: 264 AVISGNITFPE 274
+++ TF E
Sbjct: 214 NIMNAEYTFDE 224
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ + + + +L+ +I
Sbjct: 77 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQAHA---ERIDHIKLLQYTSQI 126
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 127 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 171
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 34/251 (13%)
Query: 7 NLIFQMGCLCSKEAVYVKSDK----YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
N +F + + V +K D Y I E++G G F V + T +A K ++
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 63 GREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAND 122
D+ +E++ HP ++ L D ++++M+ + G L
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHD---------AFEDDNEMVMIYEFMSGGEL--- 241
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLA--NDNNPLL 180
E + + MS + ++ ++C+ + H+ Y H DLK N++ N L
Sbjct: 242 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKL 298
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCL 240
+D G A K Q V + + APE V V TD+WS+G L
Sbjct: 299 IDFGLTAHLDPK----------QSVKVTTGTAEFAAPE---VAEGKPVGYYTDMWSVGVL 345
Query: 241 LYAMCYFKSPF 251
Y + SPF
Sbjct: 346 SYILLSGLSPF 356
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH----KTF 80
SD Y + E++G+G FS V H T +A K I + ++ A+ +++E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK--IINTKKLSARDFQKLEREARICRKL 62
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HPNI+ L D + S +V G L D+ V + + S D
Sbjct: 63 QHPNIVRLHDS---------IQEESFHYLVFDLVTGGELFEDI----VAREFYSEADASH 109
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+I E++ H HR+LK N+LLA+ + L A+ E
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI-------EVN 159
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + + Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPF 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 65 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 111
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 112 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 160
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 7 NLIFQMGCLCSKEAVYVKSDK------YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI- 59
NL FQ G L + +++ S K Y V+K+G G + V L T A+K I
Sbjct: 13 NLYFQ-GDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIR 71
Query: 60 -ICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGT 118
++ + EV K HPNI+ L D +V+ Y G
Sbjct: 72 KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD---------FFEDKRNYYLVMECYKGGE 122
Query: 119 LANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP 178
L +++ + + + VD + ++ V H + HRDLK N+LL +
Sbjct: 123 LFDEI----IHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV---HRDLKPENLLLESKEKD 175
Query: 179 LLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
L+ +V SA +N + + + Y APE+ D++ DVWS+G
Sbjct: 176 ALI-------KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK----YDEKCDVWSIG 224
Query: 239 CLLYAMCYFKSPF 251
+L+ + PF
Sbjct: 225 VILFILLAGYPPF 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 92/242 (38%), Gaps = 30/242 (12%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQA 70
G E +Y +S Y + E++G+G FS V + YA K I D +
Sbjct: 10 GVDLGTENLYFQS-MYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
RE + HPNI+ L D ++ ++ G L D+ V +
Sbjct: 69 EREARICRLLKHPNIVRLHDS---------ISEEGHHYLIFDLVTGGELFEDI----VAR 115
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV 190
Y S D +I EAV H + HRDLK N+LLA+ + L A+
Sbjct: 116 EYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
Query: 191 VKVCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
E + Q P Y +PE+ D Y + D+W+ G +LY +
Sbjct: 173 -------EVEGEQQAWFGFAGTPGYLSPEVLRKDPY---GKPVDLWACGVILYILLVGYP 222
Query: 250 PF 251
PF
Sbjct: 223 PF 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 34/251 (13%)
Query: 7 NLIFQMGCLCSKEAVYVKSDK----YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
N +F + + V +K D Y I E++G G F V + T +A K ++
Sbjct: 28 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 63 GREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAND 122
D+ +E++ HP ++ L D ++++M+ + G L
Sbjct: 88 HESDKETVRKEIQTMSVLRHPTLVNLHD---------AFEDDNEMVMIYEFMSGGEL--- 135
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLA--NDNNPLL 180
E + + MS + ++ ++C+ + H+ Y H DLK N++ N L
Sbjct: 136 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKL 192
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCL 240
+D G A K Q V + + APE V V TD+WS+G L
Sbjct: 193 IDFGLTAHLDPK----------QSVKVTTGTAEFAAPE---VAEGKPVGYYTDMWSVGVL 239
Query: 241 LYAMCYFKSPF 251
Y + SPF
Sbjct: 240 SYILLSGLSPF 250
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 88/230 (38%), Gaps = 29/230 (12%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+D+Y + E IG+G FS V T YA K I D + RE + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
NI+ L D ++ +V G L D+ V + Y S D
Sbjct: 63 SNIVRLHDS---------ISEEGFHYLVFDLVTGGELFEDI----VAREYYSEADASHCI 109
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+I EAV H + HRDLK N+LLA+ + L A+ E Q
Sbjct: 110 QQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAI-------EVQGD 159
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Q P Y +PE+ ++Y + D+W+ G +LY + PF
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKEAY---GKPVDIWACGVILYILLVGYPPF 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 39/236 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHKT 79
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
+HPNI+ L D V + + V+++L G L + L K +S +
Sbjct: 72 VLHPNIITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEAT 118
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVCG 195
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIED 171
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 172 GVEFKNIFGTPE------FVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V + G+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A + A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANSFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKS---ASKSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 45/249 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ + G+G F TV L + T A+KK+I R + + ++ ++ HPNI
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNI 81
Query: 86 LPLLDHALT----GCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD---- 137
+ L + T D LN +V+ Y P D R +Y V
Sbjct: 82 VQLQSYFYTLGERDRRDIYLN------VVMEYVP------DTLHRCCRNYYRRQVAPPPI 129
Query: 138 ILKMFL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++K+FL ++ ++ H + HRD+K NVL+ + A +K+C
Sbjct: 130 LIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLV------------NEADGTLKLCDF 176
Query: 197 AEAQNL---QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
A+ L + A CS YRAPEL + + D+WS+GC+ M + F
Sbjct: 177 GSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTT--AVDIWSVGCIFAEMMLGEPIF-- 232
Query: 254 VYERGDSVA 262
RGD+ A
Sbjct: 233 ---RGDNSA 238
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 26/247 (10%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+GEG FSTV L T + YA+K + ++ I+E + +++ LDH
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
++ L Y G L +R +G + +I A++ H
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLK--YIRKIGSFDETCTRFYTA--EIVSALEYLH 149
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP 213
I HRDLK N+LL D + + D G+ A + A A A
Sbjct: 150 GKGII---HRDLKPENILLNEDMHIQITDFGT-AKVLSPESKQARANXFVGTAQ------ 199
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFP 273
Y +PEL S + +D+W+LGC++Y + PF E + +I FP
Sbjct: 200 YVSPELLTEKS---AXKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLEYDFP 254
Query: 274 ENTPFPQ 280
E FP+
Sbjct: 255 EKF-FPK 260
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 94/240 (39%), Gaps = 44/240 (18%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK----KIICHGREDQAQAIREVEHH 77
+ K ++ ++ IG+G F V L H + YA+K K I +E++
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE-----LRSVGKHY 132
K HP ++ L H AD ++ VL Y G L L+ L + Y
Sbjct: 94 KNVKHPFLVGL--HFSFQTAD-------KLYFVLDYINGGELFYHLQRERCFLEPRARFY 144
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ +I A+ H + +RDLK N+LL + + +L D G
Sbjct: 145 AA---------EIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFG-------- 184
Query: 193 VCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+C N + C P Y APE+ H Y D+ D W LG +LY M Y PF
Sbjct: 185 LCKENIEHN--STTSTFCGTPEYLAPEVLHKQPY---DRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G V + N
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA--TVFRYNNRERLLNKM- 167
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
++PY APEL + + DVWS G +L AM + P+D
Sbjct: 168 ----XGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 26/228 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + V + L +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLLN 164
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
++PY APEL + + DVWS G +L AM + P+D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G G + +V ++ +++ A+KK+ + H R + RE+ K H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 91
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
LLD + + S+V +V G N++ V +S + + ++
Sbjct: 92 LLDVFTPATS---IEDFSEVYLVTTLM--GADLNNI----VKSQALSDEHVQFLVYQLLR 142
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+K H A I HRDLK +NV + D+ ++D G A ++ G A
Sbjct: 143 GLKYIHSAGII---HRDLKPSNVAVNEDSELRILDFGLARQADEEMTG---------YVA 190
Query: 208 ERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
R YRAPE+ ++ +Q D+WS+GC++ + K+ F
Sbjct: 191 TRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 43/259 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA---QAIREVEHHKTFVH 82
D + I +G+G F V L ++ ALK + E + Q RE+E H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNIL L ++ ++ ++L Y P+G L +L+ +S + I++
Sbjct: 83 PNILRLYNY---------FYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIME-- 130
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SV-APAVVK--VCGSAE 198
++ +A+ H K I HRD+K N+LL + D G SV AP++ + +CG+
Sbjct: 131 -ELADALMYCHGKKVI---HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGT-- 184
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERG 258
+ Y PE+ + +++ D+W +G L Y + PF++
Sbjct: 185 -------------LDYLPPEMIEGRMH---NEKVDLWCIGVLCYELLVGNPPFESASH-- 226
Query: 259 DSVALAVISGNITFPENTP 277
+ ++ ++ FP + P
Sbjct: 227 NETYRRIVKVDLKFPASVP 245
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D++ ++ +G G F V L++H ++ YA+K + + + ++++EH T I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEH--TLNEKRI 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L ++ + S + MV+ Y G + + LR +G+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFY-----A 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG---SVAPAVVKVCGSAEAQNL 202
+ V F + +RDLK N+L+ + D G V + G+ E
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE---- 203
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT-----VYER 257
Y APE+ Y ++ D W+LG L+Y M PF +YE+
Sbjct: 204 -----------YLAPEIILSKGY---NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 258 GDSVALAVISGNITFP 273
++SG + FP
Sbjct: 250 -------IVSGKVRFP 258
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 143
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + K E ++ +
Sbjct: 144 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDK-----EFDSVHNK 195
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 196 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 253 QGRRLLQPEYCPDPLYE 269
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY +EKIGEG + TV ++ +T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD--ILKMF 142
I+ L D VL+S ++ +V + D +L+ +D I+K F
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEFC-------DQDLKKYFDSCNGDLDPEIVKSF 106
Query: 143 L-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKV-CGSAEAQ 200
L ++ + + H + HRDLK N+L+ + L D G + V C SAE
Sbjct: 107 LFQLLKGLGFCHSRNVL---HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV 163
Query: 201 NLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
L YR P+ LF Y D+WS GC+ + P
Sbjct: 164 TLW----------YRPPDVLFGAKLYST---SIDMWSAGCIFAELANAARPL 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+ ++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ + P G+L L+ K + + +L+ +I
Sbjct: 77 VKYKGVCYSA-------GRRNLKLIMEFLPYGSLREYLQKH---KERIDHIKLLQYTSQI 126
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HRDL T N+L+ N+N + D G + KV QD
Sbjct: 127 CKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 171
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 93/240 (38%), Gaps = 32/240 (13%)
Query: 17 SKEAVYVK--SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA---LKKIICHGREDQAQAI 71
+E +Y + SD+Y V+K+G G + V L + T A +KK + +
Sbjct: 10 GRENLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH 131
EV K HPNI+ L + +V+ Y G L +++ LR
Sbjct: 70 DEVAVLKQLDHPNIMKLYE---------FFEDKRNYYLVMEVYRGGELFDEIILR----Q 116
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVV 191
S VD + ++ H + HRDLK N+LL + + L+ + +
Sbjct: 117 KFSEVDAAVIMKQVLSGTTYLHKHNIV---HRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
G + L + Y APE+ D++ DVWS G +LY + PF
Sbjct: 174 FEVGGKMKERL-------GTAYYIAPEVLRKK----YDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 69
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 70 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 122
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 123 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 171
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ E C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
++++G+G F +V + + T + A+KK+ E RE+E K+ H NI
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + + +++ Y P G+L + L+ K + + +L+ +I
Sbjct: 75 VKYKGVCYSA-------GRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQI 124
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
C+ ++ + Y HR+L T N+L+ N+N + D G + KV QD
Sbjct: 125 CKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDFG-----LTKVLP-------QDK 169
Query: 206 AAERCSMP------YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF----KSP 250
+ P + APE + V +DVWS G +LY + + KSP
Sbjct: 170 EYYKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLYELFTYIEKSKSP 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 93 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 141
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 142 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEXXSVHNK 193
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 194 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 251 QGRRLLQPEYCPDPLYE 267
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y ++ IGEG + VS K R A+KKI + Q +RE++ F H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D +L +++ M Y + + DL + + +S+ I +I
Sbjct: 104 IGIRD---------ILRASTLEAMRDVYIVQDLMETDL-YKLLKSQQLSNDHICYFLYQI 153
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN--LQ 203
+K H A + HRDLK +N+L+ + + D G + ++ L
Sbjct: 154 LRGLKYIHSANVL---HRDLKPSNLLINTTCDLKICDFG-----LARIADPEHDHTGFLT 205
Query: 204 DVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 206 EXVATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 152
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 153 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 201
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 202 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 253
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 254 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 311 QGRRLLQPEYCPDPLYE 327
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 95 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 143
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 144 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 195
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 196 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 253 QGRRLLQPEYCPDPLYE 269
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 142
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 143 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 194
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 252 QGRRLLQPEYCPDPLYE 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ ++EK+GEG + +V H +T + A+K++ D + I+E+ + P+++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
+ + +V+ Y G++++ + LR+ ++ +I + +
Sbjct: 89 YYGSYF---------KNTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLK 136
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
++ H + I HRD+K N+LL + + L D G V G L D A
Sbjct: 137 GLEYLHFMRKI---HRDIKAGNILLNTEGHAKLADFG--------VAG-----QLTDXMA 180
Query: 208 ER---CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVY 255
+R P + APE+ Y V D+WSLG M K P+ ++
Sbjct: 181 KRNXVIGTPFWMAPEVIQEIGYNCV---ADIWSLGITAIEMAEGKPPYADIH 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 98
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 99 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 147
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 148 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 199
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 200 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 256
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 257 QGRRLLQPEYCPDPLYE 273
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 56/268 (20%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
VK + + +G+G F V L + T++ YA+K + + I++ + T V
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKIL------KKDVVIQDDDVECTMVE 69
Query: 83 PNILPLLDH-----ALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK------- 130
+L LLD L C + ++ V+ Y G L ++ VGK
Sbjct: 70 KRVLALLDKPPFLTQLHSC----FQTVDRLYFVMEYVNGGDLM--YHIQQVGKFKEPQAV 123
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV 190
Y + + I FL + I Y RDLK NV+L ++ + + D G
Sbjct: 124 FYAAEISIGLFFLH----------KRGIIY--RDLKLDNVMLDSEGHIKIADFG------ 165
Query: 191 VKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+C +++ D R C P Y APE+ Y + D W+ G LLY M
Sbjct: 166 --MC----KEHMMDGVTTREFCGTPDYIAPEIIAYQPYG---KSVDWWAYGVLLYEMLAG 216
Query: 248 KSPFDTVYERGDSVALAVISGNITFPEN 275
+ PFD E D + +++ N+++P++
Sbjct: 217 QPPFDG--EDEDELFQSIMEHNVSYPKS 242
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 142
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 143 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 194
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 252 QGRRLLQPEYCPDPLYE 268
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 161
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 92 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 140
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 141 AKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNK 192
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 193 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 250 QGRRLLQPEYCPDPLYE 266
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+ + I++ IG G F V++++ T++ YA+K + ++ + ++ E ++
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL------NKWEMLKRAETACFREERDV 143
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L D + + +V+ YY G L L L S + + D+ + + I
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDL---LTLLSKFEDKLPE-DMARFY--I 197
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
E V + Y HRD+K NVLL + + L D GS +K+ Q+ V
Sbjct: 198 GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGS----CLKMNDDGTVQSSVAV 253
Query: 206 AAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ Y +PE+ D D WSLG +Y M Y ++PF
Sbjct: 254 G----TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-----AIREVEHHKTFVHPNILPL 88
+G G + +V ++ ++ A+KK+ R Q++ A RE+ K H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
LD T + L + +V+P+ + DL+ + +G + S I + ++ +
Sbjct: 107 LD-VFTPASS--LRNFYDFYLVMPF-----MQTDLQ-KIMGMEF-SEEKIQYLVYQMLKG 156
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+K H A HRDLK N+ + D ++D G A ++ G
Sbjct: 157 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV----------- 202
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ YRAPE+ + S+ +Q D+WS+GC++ M K+ F
Sbjct: 203 -VTRWYRAPEV--ILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ + H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 67 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 113
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + N +
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG--------LATVFRYNNRER 162
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ + C ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 109/271 (40%), Gaps = 55/271 (20%)
Query: 25 SDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++Y IV +GEG F V ++H + R ALK I E +A R +
Sbjct: 32 QERYEIVSTLGEGTFGRVVQCVDHRRGGARVALK--IIKNVEKYKEAAR--------LEI 81
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK--- 140
N+L ++ DP N V M + G + EL +S+ D LK
Sbjct: 82 NVLEKINEK-----DPD-NKNLCVQMFDWFDYHGHMCISFELLG-----LSTFDFLKDNN 130
Query: 141 -----------MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDL------ 183
M ++C+AVK HD K H DLK N+L N + L +L
Sbjct: 131 YLPYPIHQVRHMAFQLCQAVKFLHDNK---LTHTDLKPENILFVNSDYELTYNLEKKRDE 187
Query: 184 GSVAPAVVKVC--GSA--EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
SV V+V GSA + ++ + + R YRAPE+ + Q DVWS+GC
Sbjct: 188 RSVKSTAVRVVDFGSATFDHEHHSTIVSTR---HYRAPEVILELGWS---QPCDVWSIGC 241
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNI 270
+++ + F T R + I G I
Sbjct: 242 IIFEYYVGFTLFQTHDNREHLAMMERILGPI 272
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 30 IVEKIGEGGFSTVSL-IEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNIL 86
+VE +G+G + V + H ++ A+K I R++Q+ RE E + T + H NIL
Sbjct: 12 LVECVGKGRYGEVWRGLWHGES---VAVK--IFSSRDEQSW-FRETEIYNTVLLRHDNIL 65
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKIC 146
+ +T NS++Q+ ++ Y+ G+L + L+ +++ H L + L +
Sbjct: 66 GFIASDMTS-----RNSSTQLWLITHYHEHGSLYDFLQRQTLEPH-------LALRLAVS 113
Query: 147 EA-------VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS--A 197
A V++F A AHRD K+ NVL+ ++ + DLG AV+ GS
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGL---AVMHSQGSDYL 170
Query: 198 EAQNLQDVAAERCSMPYRAPELF--HVDSYCVVDQR-TDVWSLGCLLYAM 244
+ N V +R Y APE+ + + C + TD+W+ G +L+ +
Sbjct: 171 DIGNNPRVGTKR----YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+E IG GGF V +H K Y +K++ + + +A REV+ H NI+
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV---- 67
Query: 91 HALTGCA-----DPVLNS-------TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
GC DP +S T + + + + KGTL +E R K + V
Sbjct: 68 -HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLA 124
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAE 198
L++F +I + V H K I +RDLK +N+ L + + D G V
Sbjct: 125 LELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVTS---------- 171
Query: 199 AQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYE 256
+N + ++ Y +PE Y + D+++LG +L + + DT +E
Sbjct: 172 LKNDGKRXRSKGTLRYMSPEQISSQDYG---KEVDLYALGLILAELLHV---CDTAFE 223
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+ + I++ IG G F V++++ T++ YA+K + ++ + ++ E ++
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL------NKWEMLKRAETACFREERDV 127
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L D + + +V+ YY G L L L S + + D+ + + I
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDL---LTLLSKFEDKLPE-DMARFY--I 181
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
E V + Y HRD+K NVLL + + L D GS +K+ Q+ V
Sbjct: 182 GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGS----CLKMNDDGTVQSSVAV 237
Query: 206 AAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ Y +PE+ D D WSLG +Y M Y ++PF
Sbjct: 238 G----TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 93/238 (39%), Gaps = 28/238 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVEHHKTF 80
D Y + E IG+G FS V + +T +++A+K K RE
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
HP+I+ LL+ +S + MV + L ++ R+ S
Sbjct: 86 KHPHIVELLE---------TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+I EA++ HD I HRD+K VLLA+ N + LG A+ +
Sbjct: 137 YMRQILEALRYCHDNNII---HRDVKPHCVLLASKENSAPVKLGGFGVAI-------QLG 186
Query: 201 NLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
VA R P + APE+ + Y + DVW G +L+ + PF ER
Sbjct: 187 ESGLVAGGRVGTPHFMAPEVVKREPY---GKPVDVWGCGVILFILLSGCLPFYGTKER 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G G + +V ++ +++ A+KK+ + H R + RE+ K H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 91
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK-HYMSSVDILKMFLKIC 146
LLD + + S+V +V T +L ++ K +S + + ++
Sbjct: 92 LLDVFTPATS---IEDFSEVYLV-------TTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+K H A I HRDLK +NV + D+ ++D G A ++ G
Sbjct: 142 RGLKYIHSAGII---HRDLKPSNVAVNEDSELRILDFGLARQADEEMTG---------YV 189
Query: 207 AERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A R YRAPE+ ++ +Q D+WS+GC++ + K+ F
Sbjct: 190 ATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 93 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 141
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 142 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 193
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 194 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 251 QGRRLLQPEYCPDPLYE 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTF 80
+ +K + + + + +G+G F V L E +T + +A+K + ++D +VE T
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL----KKDVVLMDDDVEC--TM 66
Query: 81 VHPNILPL-LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
V +L L +H + + V+ Y G L ++S K +S
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM--YHIQSCHKFDLSRATFY 124
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
+I ++ H +K I Y RDLK N+LL D + + D G ++ G A+
Sbjct: 125 AA--EIILGLQFLH-SKGIVY--RDLKLDNILLDKDGHIKIADFGMCKENML---GDAKT 176
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E C P Y APE+ Y + D WS G LLY M +SPF
Sbjct: 177 N-------EFCGTPDYIAPEILLGQKY---NHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 111
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 112 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 160
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 161 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 212
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 213 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 269
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 270 QGRRLLQPEYCPDPLYE 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 90
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 91 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 139
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 140 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 191
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 192 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 248
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 249 QGRRLLQPEYCPDPLYE 265
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 28/239 (11%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVEHHKT 79
D Y + E IG+G FS V + +T +++A+K K RE
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
HP+I+ LL+ +S + MV + L ++ R+ S
Sbjct: 83 LKHPHIVELLE---------TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
+I EA++ HD I HRD+K VLLA+ N + LG A+ +
Sbjct: 134 HYMRQILEALRYCHDNNII---HRDVKPHCVLLASKENSAPVKLGGFGVAI-------QL 183
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYER 257
VA R P + APE+ + Y + DVW G +L+ + PF ER
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPY---GKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 92 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 140
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 141 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 192
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 193 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 250 QGRRLLQPEYCPDPLYE 266
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 26/228 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + V + L +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLLN 164
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
++PY APEL + + DVWS G +L AM + P+D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 26/228 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + V + L
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERL-- 162
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ ++PY APEL + + DVWS G +L AM + P+D
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 26/228 (11%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR-EVEHHKTFVHPN 84
+ + +V+ +GEG + V L + T++ A+K + D + I+ E+ +K H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
++ H G + L Y G L + +E +G M D + F +
Sbjct: 66 VVKFYGHRREGNIQ---------YLFLEYCSGGELFDRIE-PDIG---MPEPDAQRFFHQ 112
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ V H I HRD+K N+LL +N + D G + V + L +
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLLN 164
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
++PY APEL + + DVWS G +L AM + P+D
Sbjct: 165 KMX--GTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 90/232 (38%), Gaps = 34/232 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA---LKKIICHGREDQAQAIREVEHHKTFV 81
SD+Y V+K+G G + V L + T A +KK + + EV K
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HPNI+ L + +V+ Y G L +++ LR S VD +
Sbjct: 63 HPNIMKLYE---------FFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVI 109
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVA-PAVVKVCGSAEAQ 200
++ H + HRDLK N+LL + + L+ + A +V G +
Sbjct: 110 MKQVLSGTTYLHKHNIV---HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK-- 164
Query: 201 NLQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
ER Y APE+ D++ DVWS G +LY + PF
Sbjct: 165 -------ERLGTAYYIAPEVLRKK----YDEKCDVWSCGVILYILLCGYPPF 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 86 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 135
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL ++ + D G A V L +
Sbjct: 136 LRGLKYIHSANVL---HRDLKPSNLLLNTTSDLKICDFGL---ARVADPDHDHTGFLTEY 189
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 190 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L ++++ + MV+ + P G L + L ++ H + L++ L
Sbjct: 85 IVKLYG---------LMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLD 130
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG-SAEAQNLQ 203
I ++ + P HRDL++ N+ L + L AP KV S Q++
Sbjct: 131 IALGIEYMQNQNP-PIVHRDLRSPNIFLQS--------LDENAPVCAKVADFSLSQQSVH 181
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
V+ + + APE + ++ D +S +LY + + PFD Y G +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE-YSYGKIKFI 239
Query: 264 AVISG---NITFPENTP 277
+I T PE+ P
Sbjct: 240 NMIREEGLRPTIPEDCP 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 85
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 86 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 134
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 135 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 186
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 187 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 243
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 244 QGRRLLQPEYCPDPLYE 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 88
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 89 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 138 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 189
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 190 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 247 QGRRLLQPEYCPDPLYE 263
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 84 IGIND----IIRAPTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 134 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKIXDFGL---ARVADPDHDHTGFLTEY 187
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 188 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 221
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 142
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 143 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 194
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 252 QGRRLLQPEYCPDPLYE 268
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 112
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 113 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 161
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 162 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 213
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 214 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 270
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 271 QGRRLLQPEYCPDPLYE 287
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED---QAQAIREVEHHKTFVH 82
+KY + KIGEG + V + T + A+KK + +D + A+RE+ K H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQLKH 61
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAN-DLELRSVGKHYMSSVDILKM 141
PN++ LL+ V ++ +V Y L D R V +H + S+
Sbjct: 62 PNLVNLLE---------VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSIT---- 108
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ +AV H I HRD+K N+L+ +V+K+C A+
Sbjct: 109 -WQTLQAVNFCHKHNCI---HRDVKPENILITKH-------------SVIKLCDFGFARL 151
Query: 202 LQDVA----AERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
L + E + YR+PEL D+ DVW++GC+
Sbjct: 152 LTGPSDYYDDEVATRWYRSPELLVGDTQ--YGPPVDVWAIGCVF 193
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 32 EKIGEGGFSTV---SLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNI 85
E IG G F V +L+++ K A+K +I G + +Q + E K F HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L LL L P L+VLPY G L N + + H + D++ L++
Sbjct: 94 LSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQV 142
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ +K K + HRDL N +L + D G + + E ++ +
Sbjct: 143 AKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNK 194
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + A E + ++DVWS G LL+ + +P D +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 266 ISGNITFPENTPFPQYQ 282
+ PE P P Y+
Sbjct: 252 QGRRLLQPEYCPDPLYE 268
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-----AIREVEHHKTFVHPNILPL 88
+G G + +V ++ ++ A+KK+ R Q++ A RE+ K H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
LD T + L + +V+P+ + DL+ + +G + S I + ++ +
Sbjct: 89 LD-VFTPASS--LRNFYDFYLVMPF-----MQTDLQ-KIMGLKF-SEEKIQYLVYQMLKG 138
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+K H A HRDLK N+ + D ++D G A ++ G
Sbjct: 139 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV----------- 184
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ YRAPE+ + S+ +Q D+WS+GC++ M K+ F
Sbjct: 185 -VTRWYRAPEV--ILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTF 80
+ +K + + + + +G+G F V L E +T + +A+K + ++D +VE T
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL----KKDVVLMDDDVEC--TM 65
Query: 81 VHPNILPL-LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
V +L L +H + + V+ Y G L ++S K +S
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM--YHIQSCHKFDLSRATFY 123
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
+I ++ H +K I Y RDLK N+LL D + + D G ++ G A+
Sbjct: 124 AA--EIILGLQFLH-SKGIVY--RDLKLDNILLDKDGHIKIADFGMCKENML---GDAKT 175
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
C P Y APE+ Y + D WS G LLY M +SPF
Sbjct: 176 NXF-------CGTPDYIAPEILLGQKY---NHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 94/235 (40%), Gaps = 34/235 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ +E +G G FS V L++ T K +ALK I + E+ K H NI+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
L D + ST+ +V+ G L + + R V + D + ++
Sbjct: 71 LED---------IYESTTHYYLVMQLVSGGELFDRILERGV----YTEKDASLVIQQVLS 117
Query: 148 AVKVFHDAKPIAYAHRDLKTANVL-LANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
AVK H+ HRDLK N+L L + N +M + S QN +
Sbjct: 118 AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM--------ITDFGLSKMEQN--GIM 164
Query: 207 AERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
+ C P Y APE+ Y + D WS+G + Y + PF YE +S
Sbjct: 165 STACGTPGYVAPEVLAQKPY---SKAVDCWSIGVITYILLCGYPPF---YEETES 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGIND----IIRAPTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGL---ARVADPDHDHTGFLTEY 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 17 SKEAVYVKSD-----KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI 71
S+E +V+ D + IV ++G+G F V ++ +T A K I E+ I
Sbjct: 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGK 130
E+E T HP I+ LL ++ +++ + P G + A LEL
Sbjct: 65 VEIEILATCDHPYIVKLLG---------AYYHDGKLWIMIEFCPGGAVDAIMLEL----D 111
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV 190
++ I + ++ EA+ H + I HRDLK NVL+ + + L D G
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRII---HRDLKAGNVLMTLEGDIRLADFG------ 162
Query: 191 VKVCGSAEAQNLQDVAAERC--SMPYR-APELFHVDSY--CVVDQRTDVWSLGCLLYAMC 245
A+NL+ + PY APE+ ++ D + D+WSLG L M
Sbjct: 163 ------VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
Query: 246 YFKSP 250
+ P
Sbjct: 217 QIEPP 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKSQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D+ ++D G
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDSELKILDFG-------- 170
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+C + + VA YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 171 LCRHTDDEMTGYVATRW----YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGIND----IIRAPTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGL---ARVADPDHDHTGFLTEY 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHPN 84
KY +EKIGEG + TV ++ +T + ALK++ ++ + A+RE+ K H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD--ILKMF 142
I+ L D VL+S ++ +V + D +L+ +D I+K F
Sbjct: 63 IVRLHD---------VLHSDKKLTLVFEFC-------DQDLKKYFDSCNGDLDPEIVKSF 106
Query: 143 L-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKV-CGSAEAQ 200
L ++ + + H + HRDLK N+L+ + L + G + V C SAE
Sbjct: 107 LFQLLKGLGFCHSRNVL---HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV 163
Query: 201 NLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
L YR P+ LF Y D+WS GC+ + P
Sbjct: 164 TLW----------YRPPDVLFGAKLYST---SIDMWSAGCIFAELANAGRPL 202
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 84 IGIND----IIRAPTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 134 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGL---ARVADPDHDHTGFLTEY 187
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 188 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 221
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L ++++ + MV+ + P G L + L ++ H + L++ L
Sbjct: 85 IVKLYG---------LMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLD 130
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG-SAEAQNLQ 203
I ++ + P HRDL++ N+ L + L AP KV Q++
Sbjct: 131 IALGIEYMQNQNP-PIVHRDLRSPNIFLQS--------LDENAPVCAKVADFGTSQQSVH 181
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
V+ + + APE + ++ D +S +LY + + PFD
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFD 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 85
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 86 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 138
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 139 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 187
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 233
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 84 IGIND----IIRAPTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 134 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGL---ARVADPDHDHTGFLTEY 187
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 188 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
+ ++ IG G ++ V L+ +T + YA+K K + + ED + E H F +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV--QTEKH-VFEQAS 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-----GKHYMSSVDIL 139
P L L C + S++ V+ Y G L ++ + + Y + + +
Sbjct: 79 NHPFL-VGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL- 132
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
A+ H+ I +RDLK NVLL ++ + L D G +C E
Sbjct: 133 --------ALNYLHERGII---YRDLKLDNVLLDSEGHIKLTDYG--------MC--KEG 171
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
D + C P Y APE+ + Y D W+LG L++ M +SPFD V
Sbjct: 172 LRPGDTTSXFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALKKIICH-GREDQAQAIREVEHHKTFVHPNI 85
+ +GEG F VSL + T + A+K + G + ++ +E++ +T H +I
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ GC + ++ Q +V+ Y P G+L + L S+G +L +I
Sbjct: 96 I-----KYKGCCEDAGAASLQ--LVMEYVPLGSLRDYLPRHSIG-----LAQLLLFAQQI 143
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
CE + H Y HRDL NVLL ND + D G +A AV E V
Sbjct: 144 CEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFG-LAKAV------PEGHEXYRV 193
Query: 206 AAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ S + + APE + +DVWS G LY +
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLYEL 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDH 91
E +G+G F + H +T + +K++I E Q ++EV+ + HPN+L +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG- 74
Query: 92 ALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKV 151
VL ++ + Y GTL ++ + V K I +
Sbjct: 75 --------VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK---DIASGMAY 123
Query: 152 FHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER-- 209
H I HRDL + N L+ + N ++ D G V + ++L+ ++
Sbjct: 124 LHSMNII---HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 210 --CSMPYR-APELFHVDSYCVVDQRTDVWSLGCLL 241
PY APE+ + SY D++ DV+S G +L
Sbjct: 181 TVVGNPYWMAPEMINGRSY---DEKVDVFSFGIVL 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 48/242 (19%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE---DQAQAIREVEHHKTFV-- 81
KY + IG G S V H T +A+K + +Q + +RE +T +
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 82 ----HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
HP+I+ L+D S+S + +V KG L + L K +S +
Sbjct: 155 QVAGHPHIITLIDS---------YESSSFMFLVFDLMRKGELFDYL----TEKVALSEKE 201
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ + EAV H + HRDLK N+LL ++ L D G C
Sbjct: 202 TRSIMRSLLEAVSFLHANNIV---HRDLKPENILLDDNMQIRLSDFGF-------SCHLE 251
Query: 198 EAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQ-------RTDVWSLGCLLYAMCYFKS 249
+ L+++ C P Y APE+ C +D+ D+W+ G +L+ +
Sbjct: 252 PGEKLREL----CGTPGYLAPEILK----CSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
Query: 250 PF 251
PF
Sbjct: 304 PF 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 24/235 (10%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTF 80
V ++ D + I++ IG G FS V++++ QT + YA+K + ++ ++ E
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM------NKWDMLKRGEVSCFR 109
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
++L D + + +V+ YY G L L G+ ++ +
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLT--LLSKFGERI--PAEMAR 165
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+L E V + Y HRD+K N+LL + L D GS +K+ +
Sbjct: 166 FYL--AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGS----CLKLRADGTVR 219
Query: 201 NLQDVAAERCSMPYRAPELFHV----DSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+L V + Y +PE+ D W+LG Y M Y ++PF
Sbjct: 220 SLVAVG----TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
+ ++ IG G ++ V L+ +T + YA+K K + + ED + E H F +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV--QTEKH-VFEQAS 63
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-----GKHYMSSVDIL 139
P L L C + S++ V+ Y G L ++ + + Y + + +
Sbjct: 64 NHPFL-VGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL- 117
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
A+ H+ I +RDLK NVLL ++ + L D G +C E
Sbjct: 118 --------ALNYLHERGII---YRDLKLDNVLLDSEGHIKLTDYG--------MC--KEG 156
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
D + C P Y APE+ + Y D W+LG L++ M +SPFD V
Sbjct: 157 LRPGDTTSXFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ IV ++G+G F V ++ +T A K I E+ I E+E T HP I+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGKHYMSSVDILKMFLKIC 146
LL ++ +++ + P G + A LEL ++ I + ++
Sbjct: 73 LLG---------AYYHDGKLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQML 119
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
EA+ H + I HRDLK NVL+ + + L D G A+NL+ +
Sbjct: 120 EALNFLHSKRII---HRDLKAGNVLMTLEGDIRLADFG------------VSAKNLKTLQ 164
Query: 207 AERC--SMPY-RAPELFHVDSY--CVVDQRTDVWSLGCLLYAMCYFKSP 250
PY APE+ ++ D + D+WSLG L M + P
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYAL---KKIICHGREDQAQAIREVEHHKTFVHPN 84
+ ++ IG G ++ V L+ +T + YA+ KK + + ED + E H F +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWV--QTEKH-VFEQAS 110
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-----GKHYMSSVDIL 139
P L L C + S++ V+ Y G L ++ + + Y + + +
Sbjct: 111 NHPFL-VGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL- 164
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
A+ H+ I +RDLK NVLL ++ + L D G +C E
Sbjct: 165 --------ALNYLHERGII---YRDLKLDNVLLDSEGHIKLTDYG--------MC--KEG 203
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
D + C P Y APE+ + Y D W+LG L++ M +SPFD V
Sbjct: 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 32/245 (13%)
Query: 11 QMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA 70
+M +K V +++ ++ +G+G F V L++ T + YA+K + +++ A
Sbjct: 136 EMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL----KKEVIVA 191
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
EV H T +L H + ++ V+ Y G L L V
Sbjct: 192 KDEVAH--TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-- 247
Query: 131 HYMSSVDILKMF-LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
S D + + +I A+ H K + Y RDLK N++L D + + D G
Sbjct: 248 ---FSEDRARFYGAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFG----- 297
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+C + ++D A + C P Y APE+ + Y + D W LG ++Y M
Sbjct: 298 ---LC----KEGIKDGATMKTFCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMC 347
Query: 247 FKSPF 251
+ PF
Sbjct: 348 GRLPF 352
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPN 84
+ ++ IG G ++ V L+ +T + YA+K K + + ED + E H F +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV--QTEKH-VFEQAS 67
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-----GKHYMSSVDIL 139
P L L C + S++ V+ Y G L ++ + + Y + + +
Sbjct: 68 NHPFL-VGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL- 121
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
A+ H+ I +RDLK NVLL ++ + L D G +C E
Sbjct: 122 --------ALNYLHERGII---YRDLKLDNVLLDSEGHIKLTDYG--------MC--KEG 160
Query: 200 QNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
D + C P Y APE+ + Y D W+LG L++ M +SPFD V
Sbjct: 161 LRPGDTTSXFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 46/271 (16%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRED--QAQAIREVEHHKTFVHP 83
D+Y + K+GEG + V + T + A+K+I E+ AIREV K H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+ L V++ ++ ++ Y NDL+ + + K+ S+ ++K FL
Sbjct: 94 NIIEL---------KSVIHHNHRLHLIFEY-----AENDLK-KYMDKNPDVSMRVIKSFL 138
Query: 144 -KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQ 200
++ V H + + HRDLK N+LL+ + S P V+K+ G A A
Sbjct: 139 YQLINGVNFCHSRRCL---HRDLKPQNLLLSVSD-------ASETP-VLKIGDFGLARAF 187
Query: 201 N--LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF------- 251
++ E ++ YR PE+ + D+WS+ C ++A K+P
Sbjct: 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTS--VDIWSIAC-IWAEMLMKTPLFPGDSEI 244
Query: 252 DTVYERGDSVALAVISGNITFPENTPFPQYQ 282
D +++ + + L + T+P T P ++
Sbjct: 245 DQLFKIFEVLGLP---DDTTWPGVTALPDWK 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 32/245 (13%)
Query: 11 QMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA 70
+M +K V +++ ++ +G+G F V L++ T + YA+K + +++ A
Sbjct: 133 EMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL----KKEVIVA 188
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
EV H T +L H + ++ V+ Y G L L V
Sbjct: 189 KDEVAH--TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-- 244
Query: 131 HYMSSVDILKMF-LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
S D + + +I A+ H K + Y RDLK N++L D + + D G
Sbjct: 245 ---FSEDRARFYGAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFG----- 294
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+C + ++D A + C P Y APE+ + Y + D W LG ++Y M
Sbjct: 295 ---LC----KEGIKDGATMKTFCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMC 344
Query: 247 FKSPF 251
+ PF
Sbjct: 345 GRLPF 349
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 77
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 78 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 130
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 131 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 179
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 88/230 (38%), Gaps = 29/230 (12%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH--GREDQAQAIREVEHHKTFVH 82
+++Y + E++G+G FS V + YA I D + RE + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D ++ ++ G L D+ V + Y S D
Sbjct: 70 PNIVRLHD---------SISEEGHHYLIFDLVTGGELFEDI----VAREYYSEADASHCI 116
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+I EAV H + HR+LK N+LLA+ + L A+ E +
Sbjct: 117 QQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI-------EVEGE 166
Query: 203 QDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Q P Y +PE+ D Y + D+W+ G +LY + PF
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPY---GKPVDLWACGVILYILLVGYPPF 213
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V +++ ++ +G+G F V L++ T + YA+K + +++ A EV H T
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL----KKEVIVAKDEVAH--TLTE 59
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
+L H + ++ V+ Y G L L V S D + +
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-----FSEDRARFY 114
Query: 143 -LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+I A+ H K + Y RDLK N++L D + + D G +C +
Sbjct: 115 GAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFG--------LC----KEG 160
Query: 202 LQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++D A + C P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 161 IKDGATMKXFCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 76
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 77 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 129
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 130 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 178
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 70
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 71 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 123
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 124 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 172
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V +++ ++ +G+G F V L++ T + YA+K + +++ A EV H T
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL----KKEVIVAKDEVAH--TLTE 58
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
+L H + ++ V+ Y G L L V S D + +
Sbjct: 59 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-----FSEDRARFY 113
Query: 143 -LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+I A+ H K + Y RDLK N++L D + + D G +C +
Sbjct: 114 GAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFG--------LC----KEG 159
Query: 202 LQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++D A + C P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 160 IKDGATMKXFCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 69
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 70 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 122
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 123 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 171
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 86 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 135
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 136 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 189
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 190 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 75
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 76 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 128
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 129 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 177
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 223
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
+H N++ L D V + + V+++L G L + L K +S +
Sbjct: 71 QVLHHNVITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIE 170
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 DGVEFKNI------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVH 82
V +++ ++ +G+G F V L++ T + YA+K + +++ A EV H T
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL----KKEVIVAKDEVAH--TLTE 60
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
+L H + ++ V+ Y G L L V S D + +
Sbjct: 61 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-----FSEDRARFY 115
Query: 143 -LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+I A+ H K + Y RDLK N++L D + + D G +C +
Sbjct: 116 GAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFG--------LC----KEG 161
Query: 202 LQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++D A + C P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 162 IKDGATMKXFCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 39/275 (14%)
Query: 13 GCLCSKEAVYVKS----DKYYIV--EKIGEGGFSTVSLIEHSQTKKRYALK--KIICHGR 64
G E +Y +S + +YI+ +++G G F+ V T + YA K K G+
Sbjct: 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ 69
Query: 65 EDQAQAIREV---EHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAN 121
+ +A+ + E+ E K+ P ++ L + V +TS+++++L Y G + +
Sbjct: 70 DCRAEILHEIAVLELAKSC--PRVINLHE---------VYENTSEIILILEYAAGGEIFS 118
Query: 122 DLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLM 181
L L + + +S D++++ +I E V H + H DLK N+LL++ +
Sbjct: 119 -LCLPELAE-MVSENDVIRLIKQILEGVYYLHQNNIV---HLDLKPQNILLSS-----IY 168
Query: 182 DLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
LG + +V S + + ++ + Y APE+ + D + TD+W++G +
Sbjct: 169 PLGDIK--IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDP---ITTATDMWNIGIIA 223
Query: 242 YAMCYFKSPFDTVYERGDSVALAVISGNITFPENT 276
Y + SPF V E L + N+ + E T
Sbjct: 224 YMLLTHTSPF--VGEDNQETYLNISQVNVDYSEET 256
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 40/226 (17%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + T K+ A+KK+ ++ + EV + + H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + A+
Sbjct: 112 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIATVCLSVLRALSYL 157
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H+ I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 158 HNQGVI---HRDIKSDSILLTSDGRIKLSDFG--------FC----AQVSKEVPKRKXLV 202
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-----YFKSP 250
PY APE+ Y D+WSLG ++ M YF P
Sbjct: 203 GTPYWMAPEVISRLPYGT---EVDIWSLGIMVIEMIDGEPPYFNEP 245
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 72 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 124
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 125 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 173
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGKHYMSSVDILKMFL 143
I+ LLD + + +++ + G + A LEL + ++ I +
Sbjct: 96 IVKLLD---------AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCK 142
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +A+ HD K I HRDLK N+L D + L D G A+N +
Sbjct: 143 QTLDALNYLHDNKII---HRDLKAGNILFTLDGDIKLADFG------------VSAKNTR 187
Query: 204 DVAAERC--SMPYR-APELFHVDSYC--VVDQRTDVWSLGCLLYAMCYFKSP 250
+ PY APE+ ++ D + DVWSLG L M + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 36/257 (14%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI-------REVEHHKTFVHPN 84
++IG+GGF V + K A+K +I E + + I REV HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L ++++ + MV+ + P G L + L ++ H + L++ L
Sbjct: 85 IVKLYG---------LMHNPPR--MVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLD 130
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG-SAEAQNLQ 203
I ++ + P HRDL++ N+ L + L AP KV Q++
Sbjct: 131 IALGIEYMQNQNP-PIVHRDLRSPNIFLQS--------LDENAPVCAKVADFGLSQQSVH 181
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
V+ + + APE + ++ D +S +LY + + PFD Y G +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE-YSYGKIKFI 239
Query: 264 AVISG---NITFPENTP 277
+I T PE+ P
Sbjct: 240 NMIREEGLRPTIPEDCP 256
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 82 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 131
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 132 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 185
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 186 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLXEX 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 89 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 138
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 139 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLXEX 192
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 193 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 89 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 138
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 139 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 192
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 193 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 90 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 139
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 140 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 193
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 194 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 81 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 130
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 131 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 184
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 185 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 84 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 134 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 187
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 188 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI----- 85
+E IG GGF V +H K Y ++++ + + +A REV+ H NI
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIVHYNG 72
Query: 86 ---------------LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
L D+ + + T + + + + KGTL +E R K
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV 190
+ V L++F +I + V H K I HRDLK +N+ L + + D G V
Sbjct: 133 --LDKVLALELFEQITKGVDYIHSKKLI---HRDLKPSNIFLVDTKQVKIGDFGLVTS-- 185
Query: 191 VKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+N + ++ Y +PE Y + D+++LG +L + +
Sbjct: 186 --------LKNDGKRTRSKGTLRYMSPEQISSQDYG---KEVDLYALGLILAELLH 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 82 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 131
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 132 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 185
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 186 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGKHYMSSVDILKMFL 143
I+ LLD + + +++ + G + A LEL + ++ I +
Sbjct: 96 IVKLLD---------AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCK 142
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +A+ HD K I HRDLK N+L D + L D G A+N +
Sbjct: 143 QTLDALNYLHDNKII---HRDLKAGNILFTLDGDIKLADFG------------VSAKNTR 187
Query: 204 DVAAERC--SMPYR-APELFHVDSYC--VVDQRTDVWSLGCLLYAMCYFKSP 250
+ PY APE+ ++ D + DVWSLG L M + P
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G G + +V ++ +++ A+KK+ + H R + RE+ K H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR----RTYRELRLLKHLKHENVIG 83
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK-HYMSSVDILKMFLKIC 146
LLD + + S+V +V T +L ++ K +S + + ++
Sbjct: 84 LLDVFTPATS---IEDFSEVYLV-------TTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 147 EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVA 206
+K H A I HRDLK +NV + D ++D G A ++ G
Sbjct: 134 RGLKYIHSAGII---HRDLKPSNVAVNEDCELRILDFGLARQADEEMTG---------YV 181
Query: 207 AERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A R YRAPE+ ++ +Q D+WS+GC++ + K+ F
Sbjct: 182 ATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 86 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 135
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 136 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 189
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 190 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 104 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 153
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 154 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 207
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 208 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 92 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 141
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 142 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 195
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 196 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 84 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 133
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 134 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 187
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 188 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 72 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 124
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 125 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 173
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D + I+ ++G+G F V ++ +T A K I E+ + E++ + HPN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGKHYMSSVDILKMFL 143
I+ LLD + + +++ + G + A LEL + ++ I +
Sbjct: 96 IVKLLD---------AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCK 142
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +A+ HD K I HRDLK N+L D + L D G A+N +
Sbjct: 143 QTLDALNYLHDNKII---HRDLKAGNILFTLDGDIKLADFG------------VSAKNTR 187
Query: 204 DVAAER--CSMPYR-APELFHVDSYC--VVDQRTDVWSLGCLLYAMCYFKSP 250
+ PY APE+ ++ D + DVWSLG L M + P
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + DL + + ++S+ I +I
Sbjct: 104 IGIND----IIRAPTIEQMKDVYLV-----THLMGADL-YKLLKTQHLSNDHICYFLYQI 153
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 154 LRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGL---ARVADPDHDHTGFLTEY 207
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 208 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 241
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
+H N++ L D V + + V+++L G L + L K +S +
Sbjct: 71 QVLHHNVITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIE 170
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 DGVEFKNI------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
+H N++ L D V + + V+++L G L + L K +S +
Sbjct: 71 QVLHHNVITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIE 170
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 DGVEFKNI------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 87 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 132
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 133 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 177
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 178 GTPYWMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPPY 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 115
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 116 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 168
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 169 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 217
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCP 121
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V+ G L + ++ R G + + ++
Sbjct: 122 HIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMK 174
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 175 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 223
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
+H N++ L D V + + V+++L G L + L K +S +
Sbjct: 71 QVLHHNVITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIE 170
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 DGVEFKNI------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D Y I E++G G F+ V T YA K I + + REV +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
+H N++ L D V + + V+++L G L + L K +S +
Sbjct: 71 QVLHHNVITLHD---------VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+I + V H K AH DLK N++L + N P+ L+D G ++
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIE 170
Query: 195 GSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ P + APE+ +Y + D+WS+G + Y + SPF
Sbjct: 171 DGVEFKNI-------FGTPEFVAPEIV---NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 32/255 (12%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH-KTFV---HPNILP 87
E IG GGF V A+K ED +Q I V K F HPNI+
Sbjct: 13 EIIGIGGFGKV--YRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII- 69
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
AL G V + +V+ + G L L GK + ++ ++I
Sbjct: 70 ----ALRG----VCLKEPNLCLVMEFARGGPLNRVLS----GKRIPPDI-LVNWAVQIAR 116
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC--GSAEAQNLQDV 205
+ HD + HRDLK++N+L+ ++ G ++ ++K+ G A +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQK-----VENGDLSNKILKITDFGLAREWHRTTK 171
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAV 265
+ + + APE+ + + +DVWS G LL+ + + PF + G +VA V
Sbjct: 172 MSAAGAYAWMAPEVIRASMFS---KGSDVWSYGVLLWELLTGEVPFRGI--DGLAVAYGV 226
Query: 266 ISGNITFPENTPFPQ 280
+ P + P+
Sbjct: 227 AMNKLALPIPSTCPE 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 91 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 136
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 137 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 181
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 182 GTPYWMAPELISRLPY---GPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKXQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDXELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALK--KIICHGREDQAQAIREVEHHKTFVHPN 84
+ +GEG F VSL + T + A+K K C G + ++ RE+E +T H +
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEH 71
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ GC + V +V+ Y P G+L + L +H + +L +
Sbjct: 72 IV-----KYKGCCED--QGEKSVQLVMEYVPLGSLRDYLP-----RHCVGLAQLLLFAQQ 119
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
ICE + H Y HR L NVLL ND + D G +A AV E
Sbjct: 120 ICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFG-LAKAV------PEGHEYYR 169
Query: 205 VAAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
V + S + + APE C +DVWS G LY +
Sbjct: 170 VREDGDSPVFWYAPECL---KECKFYYASDVWSFGVTLYEL 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 54/256 (21%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE----HHKTFVHPNILPLL 89
+G+G F V L E T + YA+K + ++D +VE + P P L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKIL----KKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH-------YMSSVDILKMF 142
L C + ++ V+ Y G L ++ VG+ Y + + I F
Sbjct: 84 TQ-LHSC----FQTMDRLYFVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
L+ +K I Y RDLK NV+L ++ + + D G +C +N+
Sbjct: 137 LQ----------SKGIIY--RDLKLDNVMLDSEGHIKIADFG--------MC----KENI 172
Query: 203 QDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
D + C P Y APE+ Y + D W+ G LLY M ++PF+ E D
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQPYG---KSVDWWAFGVLLYEMLAGQAPFEG--EDED 227
Query: 260 SVALAVISGNITFPEN 275
+ +++ N+ +P++
Sbjct: 228 ELFQSIMEHNVAYPKS 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALK--KIICHGREDQAQAIREVEHHKTFVHPN 84
+ +GEG F VSL + T + A+K K C G + ++ RE+E +T H +
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEH 72
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ GC + V +V+ Y P G+L + L +H + +L +
Sbjct: 73 IV-----KYKGCCED--QGEKSVQLVMEYVPLGSLRDYLP-----RHCVGLAQLLLFAQQ 120
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
ICE + H Y HR L NVLL ND + D G +A AV E
Sbjct: 121 ICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFG-LAKAV------PEGHEYYR 170
Query: 205 VAAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
V + S + + APE C +DVWS G LY +
Sbjct: 171 VREDGDSPVFWYAPECL---KECKFYYASDVWSFGVTLYEL 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 46/243 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIREVEHHKTFVHPN 84
+ Y ++K+GEG ++TV + T ALK+I + H AIREV K H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS------SVDI 138
I+ L D ++++ + +V Y L DL K Y+ ++
Sbjct: 62 IVTLHD---------IIHTEKSLTLVFEY-----LDKDL------KQYLDDCGNIINMHN 101
Query: 139 LKMFL-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+K+FL ++ + H K + HRDLK N+L+ L D G A
Sbjct: 102 VKLFLFQLLRGLAYCHRQKVL---HRDLKPQNLLINERGELKLADFG---------LARA 149
Query: 198 EAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS--PFDTV 254
++ + E ++ YR P+ L Y + D+W +GC+ Y M + P TV
Sbjct: 150 KSIPTKTYDNEVVTLWYRPPDILLGSTDYST---QIDMWGVGCIFYEMATGRPLFPGSTV 206
Query: 255 YER 257
E+
Sbjct: 207 EEQ 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 60/248 (24%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHHKT 79
+ +Y V +IG G + TV + ALK + + +G E +REV +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-------GKHY 132
F HPN++ L+D CA + +V +V + D +LR+ G
Sbjct: 63 FEHPNVVRLMDV----CATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPA 111
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-------- 184
+ D+++ FL+ + F A I HRDLK N+L+ + L D G
Sbjct: 112 ETIKDLMRQFLRGLD----FLHANCIV--HRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 185 -SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
++AP VV + YRAPE+ +Y D+WS+GC+
Sbjct: 166 MALAPVVVTLW-------------------YRAPEVLLQSTYATP---VDMWSVGCIFAE 203
Query: 244 MCYFKSPF 251
M K F
Sbjct: 204 MFRRKPLF 211
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 98 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 143
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 144 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 188
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 189 GTPYWMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A++KI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKTQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 96 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 141
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 142 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 186
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 187 GTPYWMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPPY 225
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D Y +V K+G G +S V + ++ +K + + + I+ +E+ + PN
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRG--GPN 93
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D DPV + + V N+ + + + + ++ DI +
Sbjct: 94 IITLAD----IVKDPVSRTPALVF---------EHVNNTDFKQLYQ-TLTDYDIRFYMYE 139
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQNLQ 203
I +A+ H + HRD+K NV++ +++ L L+D G + + + N++
Sbjct: 140 ILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LAEFYHPGQEYNVR 191
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 192 -VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALKKIICH-GREDQAQAIREVEHHKTFVHPNI 85
+ +GEG F VSL + T + A+K + G + ++ +E++ +T H +I
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ GC + + Q +V+ Y P G+L + L S+G +L +I
Sbjct: 79 I-----KYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHSIG-----LAQLLLFAQQI 126
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
CE + H Y HR+L NVLL ND + D G +A AV E V
Sbjct: 127 CEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFG-LAKAV------PEGHEYYRV 176
Query: 206 AAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ S + + APE + +DVWS G LY +
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLYEL 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 34/250 (13%)
Query: 5 GLNLIFQMGCLCSKEAVYVKSDKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHG 63
GL ++FQ + Y +D Y + +++ G G V H +T ++ ALK +
Sbjct: 11 GLEVLFQ----GPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--- 63
Query: 64 REDQAQAIREVEHH-KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAND 122
D +A +EV+HH + P+I+ +LD + + + +L+++ G L +
Sbjct: 64 --DSPKARQEVDHHWQASGGPHIVCILD-----VYENMHHGKRCLLIIMECMEGGELFSR 116
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
++ R G + + ++ I A++ H AHRD+K N+L + ++
Sbjct: 117 IQER--GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLK 171
Query: 183 LGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLL 241
L A + Q+ C PY APE+ + Y D+ D+WSLG ++
Sbjct: 172 LTDFGFA---------KETTQNALQTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIM 219
Query: 242 YAMCYFKSPF 251
Y + PF
Sbjct: 220 YILLCGFPPF 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ A + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNIFGTPA------FVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 123
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D+ ++D G +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDSELKILDFGLARHTDDE 180
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 181 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 141 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 186
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 187 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 231
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 232 GTPYWMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQ-AIREVEHHKTFVHPNI 85
+Y + IGEG + V + K R A+KKI + Q +RE++ F H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ + D P + V +V + + DL + + ++S+ I +I
Sbjct: 88 IGINDIIRA----PTIEQMKDVYIV-----QDLMETDL-YKLLKCQHLSNDHICYFLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K H A + HRDLK +N+LL + + D G A V L +
Sbjct: 138 LRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGL---ARVADPDHDHTGFLTEY 191
Query: 206 AAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
A R YRAPE + + Y + D+WS+GC+L M
Sbjct: 192 VATRW---YRAPEIMLNSKGYT---KSIDIWSVGCILAEM 225
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 55/279 (19%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-------- 68
+ E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 3 ANECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEI 61
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTLA 120
+ +++ H I+ L D+ +T C + LNS + K
Sbjct: 62 AYLNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKSI 108
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
+ E +S K+ + EAV H H DLK AN L+ D L
Sbjct: 109 DPWERKSYWKNML-------------EAVHTIHQH---GIVHSDLKPANFLIV-DGMLKL 151
Query: 181 MDLG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSL 237
+D G + P V ++ + + E + E + S + ++DVWSL
Sbjct: 152 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWSL 209
Query: 238 GCLLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
GC+LY M Y K+PF + + + A+I N I FP+
Sbjct: 210 GCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 247
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + IG G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 126
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 184 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 127
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D+ ++D G +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDSELKILDFGLARHTDDE 184
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 185 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 55/277 (19%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA--------QA 70
E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 59
Query: 71 IREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTLAND 122
+ +++ H I+ L D+ +T C + LNS + K +
Sbjct: 60 LNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKSIDP 106
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
E +S K+ + EAV H H DLK AN L+ D L+D
Sbjct: 107 WERKSYWKNML-------------EAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 149
Query: 183 LG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
G + P V ++ + + E + E + S + ++DVWSLGC
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWSLGC 207
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
+LY M Y K+PF + + + A+I N I FP+
Sbjct: 208 ILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 54/256 (21%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE----HHKTFVHPNILPLL 89
+G+G F V L E T + YA+K + ++D +VE + P P L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKIL----KKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH-------YMSSVDILKMF 142
L C + ++ V+ Y G L ++ VG+ Y + + I F
Sbjct: 405 TQ-LHSC----FQTMDRLYFVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
L+ +K I Y RDLK NV+L ++ + + D G +C +N+
Sbjct: 458 LQ----------SKGIIY--RDLKLDNVMLDSEGHIKIADFG--------MC----KENI 493
Query: 203 QDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
D + C P Y APE+ Y + D W+ G LLY M ++PF+ E D
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIAYQPY---GKSVDWWAFGVLLYEMLAGQAPFEG--EDED 548
Query: 260 SVALAVISGNITFPEN 275
+ +++ N+ +P++
Sbjct: 549 ELFQSIMEHNVAYPKS 564
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 128
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFG-------- 177
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A + A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 178 -LARHTADEMTGYVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 128
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFG-------- 177
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A + A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 178 -LARHTADEMTGYVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALKKIICH-GREDQAQAIREVEHHKTFVHPNI 85
+ +GEG F VSL + T + A+K + G + ++ +E++ +T H +I
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ GC + + Q +V+ Y P G+L + L S+G +L +I
Sbjct: 79 I-----KYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHSIG-----LAQLLLFAQQI 126
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
CE + H Y HR+L NVLL ND + D G +A AV E V
Sbjct: 127 CEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFG-LAKAV------PEGHEYYRV 176
Query: 206 AAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ S + + APE + +DVWS G LY +
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLYEL 213
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKXQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 128
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFG-------- 177
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A + A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 178 -LARHTADEMTGYVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 24/250 (9%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V ++ + YA+KKI H E + + EV + H ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 94 --TGCADPV--LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
P+ + S + + + Y GTL + + ++ + + ++F +I EA+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ---RDEYWRLFRQILEAL 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG--SAEAQNL----Q 203
H I HRDLK N+ + N + D G +A V + ++QNL
Sbjct: 130 SYIHSQGII---HRDLKPMNIFIDESRNVKIGDFG-LAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
++ + + Y A E+ +D +++ D++SLG + + M Y PF T ER + +
Sbjct: 186 NLTSAIGTAMYVATEV--LDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN-ILK 239
Query: 264 AVISGNITFP 273
+ S +I FP
Sbjct: 240 KLRSVSIEFP 249
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH-HKTFVHP 83
D Y + E + GEG + V + T + YA+K I +++ REVE ++ H
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N+L L++ ++ + +L + K N+LE V + S++D L
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFL---- 127
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDN--NPLLM---DLGS-----------VA 187
H+ AHRDLK N+L + N +P+ + DLGS
Sbjct: 128 ---------HNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 188 PAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMC 245
P ++ CGSAE Y APE+ + + D+R D+WSLG +LY +
Sbjct: 176 PELLTPCGSAE---------------YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 246 YFKSPF------DTVYERGDSVAL-------AVISGNITFPEN 275
PF D ++RG++ ++ G FP+
Sbjct: 221 SGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 69 GVCL---------EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 116
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+
Sbjct: 117 AYLEEASVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF------- 166
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 167 -PVKWASPEVFSFSRY---SSKSDVWSFGVLMW 195
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 81
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 132
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDXELKILDFGLARHTDDE 189
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 190 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIE----HSQTKKRYALKKIICHGR-EDQAQAIR------- 72
+ Y+ V K+G G + V L + HS+ + K GR D + I
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94
Query: 73 -EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH 131
E+ K+ HPNI+ L D V +V +Y G L + + +H
Sbjct: 95 NEISLLKSLDHPNIIKLFD---------VFEDKKYFYLVTEFYEGGELFEQI----INRH 141
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL---LMDLGSVAP 188
D + +I + H + HRD+K N+LL N N+ L ++D G +
Sbjct: 142 KFDECDAANIMKQILSGICYLHKHNIV---HRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
++ L+D + Y APE+ +++ DVWS G ++Y +
Sbjct: 199 F-------SKDYKLRDRLG---TAYYIAPEVLKKK----YNEKCDVWSCGVIMYILLCGY 244
Query: 249 SPF 251
PF
Sbjct: 245 PPF 247
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 126
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 184 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 55/277 (19%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA--------QA 70
E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 60
Query: 71 IREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTLAND 122
+ +++ H I+ L D+ +T C + LNS + K +
Sbjct: 61 LNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKSIDP 107
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
E +S K+ + EAV H H DLK AN L+ D L+D
Sbjct: 108 WERKSYWKN-------------MLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150
Query: 183 LG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
G + P V ++ + + E + E + S + ++DVWSLGC
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWSLGC 208
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
+LY M Y K+PF + + + A+I N I FP+
Sbjct: 209 ILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 244
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI- 71
G + +E V D Y E++G G F+ V T +YA K I + + +
Sbjct: 1 GTVFRQENV---DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 72 -----REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELR 126
REV K HPN++ L + V + + V+++L G L + L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL--- 105
Query: 127 SVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMD 182
K ++ + + +I V H + AH DLK N++L + N P ++D
Sbjct: 106 -AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 183 LGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
G K+ E +N+ + + APE+ + Y + D+WS+G + Y
Sbjct: 162 FGLAH----KIDFGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITY 208
Query: 243 AMCYFKSPF 251
+ SPF
Sbjct: 209 ILLSGASPF 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MAG---------FVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
KIGEG V + + K A+KK+ ++ + EV + + H N++ + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
L G ++ +V+ + G L + V M+ I + L + +A+ V
Sbjct: 218 LVG---------DELWVVMEFLEGGALTD-----IVTHTRMNEEQIAAVCLAVLQALSVL 263
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--C 210
H I HRD+K+ ++LL +D L D G C AQ ++V +
Sbjct: 264 HAQGVI---HRDIKSDSILLTHDGRVKLSDFG--------FC----AQVSKEVPRRKXLV 308
Query: 211 SMPY-RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APEL Y D+WSLG ++ M + P+
Sbjct: 309 GTPYWMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA--------QA 70
+++ VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 71 IREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTLAND 122
+ +++ H I+ L D+ +T C + LNS + K +
Sbjct: 80 LNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKSIDP 126
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
E +S K+ + EAV H H DLK AN L+ D L+D
Sbjct: 127 WERKSYWKN-------------MLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 169
Query: 183 LG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
G + P V ++ + + E + E + S + ++DVWSLGC
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWSLGC 227
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
+LY M Y K+PF + + + A+I N I FP+
Sbjct: 228 ILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 263
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MAG---------FVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI- 71
G + +E V D Y E++G G F+ V T +YA K I + + +
Sbjct: 1 GTVFRQENV---DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 72 -----REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELR 126
REV K HPN++ L + V + + V+++L G L + L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL--- 105
Query: 127 SVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMD 182
K ++ + + +I V H + AH DLK N++L + N P ++D
Sbjct: 106 -AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 183 LGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
G K+ E +N+ + + APE+ + Y + D+WS+G + Y
Sbjct: 162 FGLAH----KIDFGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITY 208
Query: 243 AMCYFKSPF 251
+ SPF
Sbjct: 209 ILLSGASPF 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 49/221 (22%)
Query: 34 IGEGGFSTV---SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
IG G F V L+E + A+KK++ +D+ RE++ + HPN++ L
Sbjct: 48 IGNGSFGVVFQAKLVESDEV----AIKKVL----QDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 91 HALTGCADPVLNSTSQVLM--VLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL----- 143
+ + +V + VL Y P+ + +HY + M L
Sbjct: 100 FFYSNG-----DKKDEVFLNLVLEYVPE-------TVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 144 -KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQN 201
++ ++ H I HRD+K N+LL + L L+D GS A + + G
Sbjct: 148 YQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGS---AKILIAGEPNVSX 201
Query: 202 LQDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F +Y D+WS GC++
Sbjct: 202 I-------CSRYYRAPELIFGATNYTT---NIDIWSTGCVM 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 117
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 175 MAG---------FVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 55/280 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA------- 68
+ E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 69 -QAIREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTL 119
+ +++ H I+ L D+ +T C + LNS + K
Sbjct: 105 IAYLNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKS 151
Query: 120 ANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL 179
+ E +S K+ + EAV H H DLK AN L+ D
Sbjct: 152 IDPWERKSYWKNML-------------EAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194
Query: 180 LMDLG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWS 236
L+D G + P V ++ + + E + E + S + ++DVWS
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWS 252
Query: 237 LGCLLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
LGC+LY M Y K+PF + + + A+I N I FP+
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 291
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 42/276 (15%)
Query: 13 GCLCSKEAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGR 64
G L S +VY K+ D+Y + + +G G V L +T K+ A+K I I R
Sbjct: 1 GPLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR 60
Query: 65 E-DQAQAIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAND 122
E D A + E+E K HP I+ + + +VL G L +
Sbjct: 61 EADPALNVETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD- 109
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
+ VG + F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 110 ---KVVGNKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL-- 161
Query: 183 LGSVAPAVVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGC 239
+K+ ++ L + + R C P Y APE+ ++ D WSLG
Sbjct: 162 --------IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 213
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITF-PE 274
+L+ +C P + + S+ + SG F PE
Sbjct: 214 ILF-ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+G+GGF+ I TK+ +A K K + + + E+ HK+ +P+++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-- 91
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
H V +VL + +L LEL K ++ + + + V+
Sbjct: 92 HGF-------FEDDDFVYVVLEICRRRSL---LELHKRRK-AVTEPEARYFMRQTIQGVQ 140
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ + I HRDLK N+ L +D + + D G K+ E + + C
Sbjct: 141 YLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFG----LATKIEFDGERKK------DLC 187
Query: 211 SMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
P Y APE+ + D+WSLGC+LY + K PF+T
Sbjct: 188 GTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFET 228
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 69 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 115
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 116 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 168
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 169 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 25/247 (10%)
Query: 30 IVEKIGEGGFSTVSLIE-HSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL 88
I EKIG G F TV E H L + H E + +REV K HPNI+ L
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV-L 98
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
A+T + +V Y +G+L L +S + + L M + +
Sbjct: 99 FMGAVT--------QPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKG 149
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+ H+ P HRDLK+ N+L+ + D G S A +
Sbjct: 150 MNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE---- 204
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISG 268
+ APE+ + ++++DV+S G +L+ + + P+ + A+
Sbjct: 205 -----WMAPEVLRDEPS---NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 269 NITFPEN 275
+ P N
Sbjct: 257 RLEIPRN 263
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 37/267 (13%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE 75
K+A + + +V+++G G F V + ++ + K K + G + E
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEAN 60
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
KT H ++ L +A+ +P+ ++ Y KG+L + L+ GK +
Sbjct: 61 LMKTLQHDKLVRL--YAVVTREEPIY-------IITEYMAKGSLLDFLKSDEGGKVLLPK 111
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ +I E + Y HRDL+ ANVL++ + D G + +V
Sbjct: 112 --LIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFG-----LARVIE 161
Query: 196 SAEAQNLQDVAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPFD 252
E A E P + APE + + + ++DVWS G LLY + Y K P+
Sbjct: 162 DNEY-----TAREGAKFPIKWTAPEAINFGCFTI---KSDVWSFGILLYEIVTYGKIPYP 213
Query: 253 TVYERGDSVALAVISGNITFP--ENTP 277
R ++ + +S P EN P
Sbjct: 214 G---RTNADVMTALSQGYRMPRVENCP 237
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 89
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 140
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 197
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 198 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 141
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 199 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 44/240 (18%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR---EVEHHKTF 80
K + + + +G+G F+ V E T A+K I R EV+ H
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELR------SVGKHYMS 134
HP+IL L ++ ++ V +VL G + L+ R + +H+M
Sbjct: 69 KHPSILELYNY---------FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC 194
+ ++L HRDL +N+LL + N + D G
Sbjct: 120 QIITGMLYLH------------SHGILHRDLTLSNLLLTRNMNIKIADFGL--------- 158
Query: 195 GSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ + + + C P Y +PE+ ++ + +DVWSLGC+ Y + + PFDT
Sbjct: 159 -ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL---ESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 141
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G + YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 199 MXGXV------------ATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 69 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 115
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 116 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 168
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 169 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 55/280 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA------- 68
+ E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 69 -QAIREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTL 119
+ +++ H I+ L D+ +T C + LNS + K
Sbjct: 105 IAYLNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKS 151
Query: 120 ANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL 179
+ E +S K+ + EAV H H DLK AN L+ D
Sbjct: 152 IDPWERKSYWKN-------------MLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194
Query: 180 LMDLG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWS 236
L+D G + P V ++ + + E + E + S + ++DVWS
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWS 252
Query: 237 LGCLLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
LGC+LY M Y K+PF + + + A+I N I FP+
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 291
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 127
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ + ++ +Q D+WS+GC++ + ++ F
Sbjct: 185 MTG---------YVATRW---YRAPEI--MLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 117
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 175 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G + YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTGXV------------ATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 24/238 (10%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREV 74
S + V SD + +G GGF V + LK+ G E Q Q EV
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT--EV 78
Query: 75 EHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
E VH N+L L +T ++ L+V PY G++A+ L R + +
Sbjct: 79 EMISMAVHRNLLRLRGFCMT---------PTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVC 194
++ L + HD HRD+K AN+LL + ++ D G +
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG--------LA 181
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ ++ A R + + APE S ++TDV+ G +L + + FD
Sbjct: 182 KLMDYKDXHVXXAVRGXIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+G+GGF+ I TK+ +A K K + + + E+ HK+ +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-- 107
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
H V +VL + +L LEL K ++ + + + V+
Sbjct: 108 HGF-------FEDDDFVYVVLEICRRRSL---LELHKRRK-AVTEPEARYFMRQTIQGVQ 156
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ + I HRDLK N+ L +D + + D G K+ E + + C
Sbjct: 157 YLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFG----LATKIEFDGERKK------DLC 203
Query: 211 SMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
P Y APE+ + D+WSLGC+LY + K PF+T
Sbjct: 204 GTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFET 244
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHHKT 79
+ +Y V +IG G + TV + ALK + + +G E +REV +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-------GKHY 132
F HPN++ L+D CA + +V +V + D +LR+ G
Sbjct: 63 FEHPNVVRLMDV----CATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPA 111
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ D+++ FL+ + F A I HRDLK N+L+ + L D G + +
Sbjct: 112 ETIKDLMRQFLRGLD----FLHANCIV--HRDLKPENILVTSGGTVKLADFG-----LAR 160
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A L V ++ YRAPE+ +Y D+WS+GC+ M K F
Sbjct: 161 IYSYQMA--LDPVV---VTLWYRAPEVLLQSTYATP---VDMWSVGCIFAEMFRRKPLF 211
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 30/233 (12%)
Query: 22 YVKSDKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH-KT 79
Y +D Y + +++ G G V H +T ++ ALK + D +A +EV+HH +
Sbjct: 5 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY-----DSPKARQEVDHHWQA 59
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
P+I+ +LD + + + +L+++ G L + ++ R G + +
Sbjct: 60 SGGPHIVCILD-----VYENMHHGKRCLLIIMECMEGGELFSRIQER--GDQAFTEREAA 112
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
++ I A++ H AHRD+K N+L + ++ L A
Sbjct: 113 EIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA---------K 160
Query: 200 QNLQDVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ Q+ C PY APE+ + Y D+ D+WSLG ++Y + PF
Sbjct: 161 ETTQNALQTPCYTPYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 80
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 131
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 188
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 189 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 38/245 (15%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA---------LKKIICHGREDQ 67
S + V SD + +G GGF V K R A LK+ G E Q
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKV-------YKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 68 AQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS 127
Q EVE VH N+L L +T ++ L+V PY G++A+ L R
Sbjct: 82 FQT--EVEMISMAVHRNLLRLRGFCMT---------PTERLLVYPYMANGSVASCLRERP 130
Query: 128 VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVA 187
+ + ++ L + HD HRD+K AN+LL + ++ D G
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG--- 187
Query: 188 PAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ + ++ A R ++ + APE S ++TDV+ G +L +
Sbjct: 188 -----LAKLMDYKDXHVXXAVRGTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITG 239
Query: 248 KSPFD 252
+ FD
Sbjct: 240 QRAFD 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 123
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 181 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 89
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 140
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 197
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 198 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 82
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 133
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 191 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 14 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 72 GVCL---------EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 119
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+
Sbjct: 120 AYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF------- 169
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 170 -PVKWASPEVFSFSRY---SSKSDVWSFGVLMW 198
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 123
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 181 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 77
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 128
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 185
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 186 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 82
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 133
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 191 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 126
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 183
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 184 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK----RTYR 82
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 133
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 191 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 69
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 120
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 177
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 178 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 98/248 (39%), Gaps = 60/248 (24%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRED-QAQAIREV---EHHKT 79
+ +Y V +IG G + TV + ALK + + +G E +REV +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-------GKHY 132
F HPN++ L+D CA + +V +V + D +LR+ G
Sbjct: 63 FEHPNVVRLMDV----CATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPA 111
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-------- 184
+ D+++ FL+ + F A I HRDLK N+L+ + L D G
Sbjct: 112 ETIKDLMRQFLRGLD----FLHANCIV--HRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 185 -SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
++ P VV + YRAPE+ +Y D+WS+GC+
Sbjct: 166 MALFPVVVTLW-------------------YRAPEVLLQSTYATP---VDMWSVGCIFAE 203
Query: 244 MCYFKSPF 251
M K F
Sbjct: 204 MFRRKPLF 211
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 127
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 185 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 81
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 132
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 189
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 190 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 75
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 126
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 183
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 184 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 90
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 141
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 199 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 69 GVCL---------EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 116
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+
Sbjct: 117 AYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF------- 166
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 167 -PVKWASPEVFSFSRY---SSKSDVWSFGVLMW 195
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA--------QA 70
+++ VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 71 IREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTLAND 122
+ +++ H I+ L D+ +T C + LNS + K +
Sbjct: 80 LNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKSIDP 126
Query: 123 LELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMD 182
E +S K+ + EAV H H DLK AN L+ D L+D
Sbjct: 127 WERKSYWKN-------------MLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 169
Query: 183 LG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
G + P V ++ + + E + E + S + ++DVWSLGC
Sbjct: 170 FGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWSLGC 227
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
+LY M Y K+PF + + + A+I N I FP+
Sbjct: 228 ILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 263
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 67
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 118
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 175
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 176 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 93
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 144
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 201
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 202 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 45/260 (17%)
Query: 7 NLIFQMGCLCSKEAVYVKS---------DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK 57
NL FQ + Y + ++Y + +G G + +V ++T R A+K
Sbjct: 17 NLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 76
Query: 58 KI------ICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVL 111
K+ I H + + RE+ K H N++ LLD + N V ++
Sbjct: 77 KLSRPFQSIIHAK----RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 132
Query: 112 PYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVL 171
G N++ V ++ + + +I +K H A I HRDLK +N+
Sbjct: 133 -----GADLNNI----VKCQKLTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLA 180
Query: 172 LANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQR 231
+ D ++D G ++ G A R YRAPE+ ++ +Q
Sbjct: 181 VNEDCELKILDFGLARHTDDEMXG---------YVATRW---YRAPEIML--NWMHYNQT 226
Query: 232 TDVWSLGCLLYAMCYFKSPF 251
D+WS+GC++ + ++ F
Sbjct: 227 VDIWSVGCIMAELLTGRTLF 246
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 72
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 123
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 181 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 68
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 119
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 176
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 177 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 107/236 (45%), Gaps = 23/236 (9%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
+Y ++ +G GG V + KR A+KKI+ + A+RE++ + H NI+
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 87 ---PLLDHALTGCADPVLNSTS-QVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
+L + + D V + T + ++ Y + LAN LE + + + ++F
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA------RLF 125
Query: 143 L-KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ ++ +K H A + HRDLK AN+ + ++ L++ +G A + + +
Sbjct: 126 MYQLLRGLKYIHSANVL---HRDLKPANLFINTED--LVLKIGDFGLARIMDPHYSHKGH 180
Query: 202 LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYE 256
L + + YR+P L ++Y + D+W+ GC+ M K+ F +E
Sbjct: 181 LSEGLVTKW---YRSPRLLLSPNNYT---KAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 67
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 118
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 175
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 176 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 9 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 67 GVCL---------EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 114
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+
Sbjct: 115 AYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF------- 164
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 165 -PVKWASPEVFSFSRY---SSKSDVWSFGVLMW 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 117
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 175 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 55/280 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA------- 68
+ E + VK Y I+++IG GG S V + ++ K+ YA+K + ++Q
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 69 -QAIREVEHHKTFVHPNILPLLDHALTG--------CADPVLNSTSQVLMVLPYYPKGTL 119
+ +++ H I+ L D+ +T C + LNS + K
Sbjct: 105 IAYLNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNS---------WLKKKKS 151
Query: 120 ANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL 179
+ E +S K+ + EAV H H DLK AN L+ D
Sbjct: 152 IDPWERKSYWKN-------------MLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194
Query: 180 LMDLG---SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWS 236
L+D G + P V ++ + + E + E + S + ++DVWS
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE--NGKSKSKISPKSDVWS 252
Query: 237 LGCLLYAMCYFKSPFDTVYERGDSVALAVISGN--ITFPE 274
LGC+LY M Y K+PF + + + A+I N I FP+
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPD 291
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE-HHKTFVHP 83
D Y + ++ G G V I + +T++++ALK + +D +A REVE H + P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-----QDCPKARREVELHWRASQCP 115
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+I+ ++D + + +L+V G L + ++ R G + + ++
Sbjct: 116 HIVRIVD-----VYENLYAGRKCLLIVXECLDGGELFSRIQDR--GDQAFTEREASEIXK 168
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I EA++ H I AHRD+K N+L + ++ L G A+
Sbjct: 169 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF--------GFAKETTSH 217
Query: 204 DVAAERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ C PY APE+ + Y D+ D WSLG + Y + PF
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKY---DKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 25/247 (10%)
Query: 30 IVEKIGEGGFSTVSLIE-HSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL 88
I EKIG G F TV E H L + H E + +REV K HPNI+ L
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV-L 98
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
A+T + +V Y +G+L L +S + + L M + +
Sbjct: 99 FMGAVT--------QPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKG 149
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+ H+ P HR+LK+ N+L+ + D G S A +
Sbjct: 150 MNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE---- 204
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISG 268
+ APE+ + ++++DV+S G +L+ + + P+ + A+
Sbjct: 205 -----WMAPEVLRDEPS---NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 269 NITFPEN 275
+ P N
Sbjct: 257 RLEIPRN 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++L G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILILELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL----LMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 39/266 (14%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI----------ICHGREDQAQAIREVEHH 77
Y I+ + +G F+ + L E + K YALKK D+ + +
Sbjct: 33 YRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGT-LANDLELRSVGKHY--MS 134
K + I+ + + + ++ + +V ++ Y + L D + K+Y
Sbjct: 91 KNELQ--IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 135 SVDILKMFLK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKV 193
+ ++K +K + + H+ K I HRD+K +N+L+ + L D G V K
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESEYMVDK- 205
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ R + + PE F +S + D+WSLG LY M Y PF
Sbjct: 206 ----------KIKGSRGTYEFMPPEFFSNES-SYNGAKVDIWSLGICLYVMFYNVVPFSL 254
Query: 254 VYERGDSVALAVISGNITFPENTPFP 279
++L + NI +N +P
Sbjct: 255 ------KISLVELFNNIR-TKNIEYP 273
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 76
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 127
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ + ++ +Q D+WS+GC++ + ++ F
Sbjct: 185 MTG---------YVATRW---YRAPEI--MLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D Y +V K+G G +S V + ++ A+K + ++ + I+ +E+ + PN
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRG--GPN 93
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L D DPV + + V N+ + + + + ++ DI +
Sbjct: 94 IITLAD----IVKDPVSRTPALVF---------EHVNNTDFKQLYQ-TLTDYDIRFYMYE 139
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQNLQ 203
I +A+ H + HRD+K NVL+ +++ L L+D G + + + N++
Sbjct: 140 ILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWG-----LAEFYHPGQEYNVR 191
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 192 -VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+G+GGF+ I TK+ +A K K + + + E+ HK+ +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-- 107
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
H V +VL + +L LEL K ++ + + + V+
Sbjct: 108 HGF-------FEDDDFVYVVLEICRRRSL---LELHKRRK-AVTEPEARYFMRQTIQGVQ 156
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ + I HRDLK N+ L +D + + D G K+ E + C
Sbjct: 157 YLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFG----LATKIEFDGERKKXL------C 203
Query: 211 SMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
P Y APE+ + D+WSLGC+LY + K PF+T
Sbjct: 204 GTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFET 244
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
+G+GGF+ I TK+ +A K K + + + E+ HK+ +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-- 107
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
H V +VL + +L LEL K ++ + + + V+
Sbjct: 108 HGF-------FEDDDFVYVVLEICRRRSL---LELHKRRK-AVTEPEARYFMRQTIQGVQ 156
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ + I HRDLK N+ L +D + + D G K+ E + C
Sbjct: 157 YLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFG----LATKIEFDGERKKTL------C 203
Query: 211 SMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
P Y APE+ + D+WSLGC+LY + K PF+T
Sbjct: 204 GTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFET 244
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 31 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 89 GVCL---------EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 136
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+ +
Sbjct: 137 AYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS--------TGTK 185
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 186 FPVKWASPEVFSFSRY---SSKSDVWSFGVLMW 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDYGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 89/232 (38%), Gaps = 31/232 (13%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G + V + R A+K+I E+ HK H NI+ L
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-- 73
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK-ICEAVKVF 152
+ + + + P G+L+ LRS + + + K I E +K
Sbjct: 74 -------FSENGFIKIFMEQVPGGSLS--ALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPL-LMDLG-SVAPAVVKVCGSAEAQNLQDVAAERC 210
HD + + HRD+K NVL+ + L + D G S A + C LQ
Sbjct: 125 HDNQIV---HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ------- 174
Query: 211 SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVA 262
Y APE+ + D+WSLGC + M K PF YE G+ A
Sbjct: 175 ---YMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKPPF---YELGEPQA 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 66
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCAK 117
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 175 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 44/257 (17%)
Query: 7 NLIFQMGCLCSKE------AVYVKSDKYYIVE---KIGEGGFSTVSLIEHSQTKKRYALK 57
NL FQ G + ++ V + D +++ KIGEG V L + ++ A+K
Sbjct: 17 NLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVK 76
Query: 58 KIICHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKG 117
+ ++ + EV + + H N++ + L G + L VL + +G
Sbjct: 77 MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVG----------EELWVLMEFLQG 126
Query: 118 TLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNN 177
D+ V + ++ I + + +A+ H I HRD+K+ ++LL D
Sbjct: 127 GALTDI----VSQVRLNEEQIATVCEAVLQALAYLHAQGVI---HRDIKSDSILLTLDGR 179
Query: 178 PLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPY-RAPELFHVDSYCVVDQRTDV 234
L D G C AQ +DV + PY APE+ Y D+
Sbjct: 180 VKLSDFG--------FC----AQISKDVPKRKXLVGTPYWMAPEVISRSLYAT---EVDI 224
Query: 235 WSLGCLLYAMCYFKSPF 251
WSLG ++ M + P+
Sbjct: 225 WSLGIMVIEMVDGEPPY 241
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 16 CSKEAVYVKS---DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA-- 70
+E +Y + D + K+G G F V L+E ++ L+++I +D++Q
Sbjct: 9 SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVE----ERSSGLERVIKTINKDRSQVPM 64
Query: 71 ---IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS 127
E+E K+ HPNI+ + + V + +V+ G L +
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFE---------VFEDYHNMYIVMETCEGGELLERIVSAQ 115
Query: 128 VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVA 187
+S + ++ ++ A+ FH + H+DLK N+L D +P +
Sbjct: 116 ARGKALSEGYVAELMKQMMNALAYFHSQHVV---HKDLKPENILF-QDTSPH-------S 164
Query: 188 PAVVKVCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
P + G AE + + Y APE+F D V + D+WS G ++Y +
Sbjct: 165 PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD----VTFKCDIWSAGVVMYFLLT 220
Query: 247 FKSPF 251
PF
Sbjct: 221 GCLPF 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 89/232 (38%), Gaps = 31/232 (13%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G + V + R A+K+I E+ HK H NI+ L
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-- 87
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK-ICEAVKVF 152
+ + + + P G+L+ LRS + + + K I E +K
Sbjct: 88 -------FSENGFIKIFMEQVPGGSLS--ALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPL-LMDLG-SVAPAVVKVCGSAEAQNLQDVAAERC 210
HD + + HRD+K NVL+ + L + D G S A + C LQ
Sbjct: 139 HDNQIV---HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ------- 188
Query: 211 SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVA 262
Y APE+ + D+WSLGC + M K PF YE G+ A
Sbjct: 189 ---YMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKPPF---YELGEPQA 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D +K
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNED-------------CELK 165
Query: 193 VCGSAEAQNLQD-VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A++ D + + YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 166 ILGFGLARHTDDEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 36/227 (15%)
Query: 32 EKIGE-GGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
E IGE G F V ++ +T A K I E+ + E++ + HPNI+ LLD
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTL-ANDLELRSVGKHYMSSVDILKMFLKICEAV 149
+ + +++ + G + A LEL + ++ I + + +A+
Sbjct: 75 ---------AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCKQTLDAL 121
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
HD K I HRDLK N+L D + L D G A+N + R
Sbjct: 122 NYLHDNKII---HRDLKAGNILFTLDGDIKLADFG------------VSAKNTRTXIQRR 166
Query: 210 CSM---PYR-APELFHVDSYC--VVDQRTDVWSLGCLLYAMCYFKSP 250
S PY APE+ ++ D + DVWSLG L M + P
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDAGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ + +VL Y P+ + V +HY + L + ++F
Sbjct: 84 SSGEK---KDVVYLNLVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 154 DAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QDVAA 207
I HRD+K N+LL D AV+K+C A+ L + +
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEPNVS 181
Query: 208 ERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
CS YRAPEL F Y DVWS GC+L
Sbjct: 182 XICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDRGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
V++IG G F V L + K + A+K I G + I E E HP ++ L
Sbjct: 12 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
L + + +V + G L++ L + + ++ +L M L +CE +
Sbjct: 70 GVCL---------EQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGM 117
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+A I HRDL N L+ + + D G + S+
Sbjct: 118 AYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF------- 167
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+ + +PE+F Y ++DVWS G L++
Sbjct: 168 -PVKWASPEVFSFSRY---SSKSDVWSFGVLMW 196
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 79
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 80 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 126
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E + +
Sbjct: 127 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKVL---- 175
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 176 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 88 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 182
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 183 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI---ICHGREDQAQAIREVEHHKT 79
+ D Y + E IG G + V + K++ A+K+I C D+ ++E++
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQ 64
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE-LRSVGKHYMSSVD- 137
HPNI+ + ++ +V+ G++ + ++ + + G+H +D
Sbjct: 65 CHHPNIVSYYTSFVV---------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 138 --ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
I + ++ E ++ H I HRD+K N+LL D + + D G A + G
Sbjct: 116 STIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG--VSAFLATGG 170
Query: 196 SAEAQNLQDV-AAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ C M APE+ V Y D + D+WS G + +P+
Sbjct: 171 DITRNKVRKTFVGTPCWM---APEVMEQVRGY---DFKADIWSFGITAIELATGAAPY 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKII------CHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 105
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 106 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 152
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E + +
Sbjct: 153 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKVL---- 201
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 202 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 243
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 39 KLGGGQYGEV----YVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +V Y P G L + LR + +++V +L M +I A+
Sbjct: 95 G---------VCTLEPPFYIVTEYMPYGNLLD--YLRECNREEVTAVVLLYMATQISSAM 143
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 144 EYLEKKN---FIHRDLAARNCLVGENHVVKVADFG--------LSRLMTGDTYTAHAGAK 192
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE +++ + ++DVW+ G LL+ + Y SP+
Sbjct: 193 FPIKWTAPESLAYNTFSI---KSDVWAFGVLLWEIATYGMSPY 232
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 103
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 104 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 150
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E + +
Sbjct: 151 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKVL---- 199
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 200 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 89
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 136
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 184
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 20 AVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQA 70
+VY K+ D+Y + + +G G V L +T K+ A+K I I RE D A
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 71 IR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
+ E+E K HP I+ + + +VL G L + + VG
Sbjct: 62 VETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVVG 107
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
+ F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL--------- 155
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICL 213
Query: 247 FKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 85 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 179
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 180 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 89
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 136
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 184
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 30/170 (17%)
Query: 83 PNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMF 142
PNI+ L D DPV + + V N+ + + + + ++ DI
Sbjct: 92 PNIITLAD----IVKDPVSRTPALVF---------EHVNNTDFKQL-RQTLTDYDIRFYM 137
Query: 143 LKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQN 201
+I +A+ H + HRD+K NV++ +++ L L+D G + + + N
Sbjct: 138 YEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LAEFYHPGQEYN 189
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 190 VR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 92 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 186
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 187 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 20 AVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQA 70
+VY K+ D+Y + + +G G V L +T K+ A+K I I RE D A
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 71 IR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
+ E+E K HP I+ + + +VL G L + + VG
Sbjct: 62 VETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVVG 107
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
+ F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL--------- 155
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICL 213
Query: 247 FKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 103 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 197
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 198 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 87
+ +IG G F V + + A+KK+ G+ E I+EV + HPN +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI- 117
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
GC + T+ ++M Y G+ ++ LE V K + V+I + +
Sbjct: 118 ----QYRGCY--LREHTAWLVM---EYCLGSASDLLE---VHKKPLQEVEIAAVTHGALQ 165
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H I HRD+K N+LL+ P L+ LG A + A
Sbjct: 166 GLAYLHSHNMI---HRDVKAGNILLS---EPGLVKLGDFGSASIMAP-----------AN 208
Query: 208 ERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APE+ D + DVWSLG + K P
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 111
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 112 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 158
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 206
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 207 LVRGEPNVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 247
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDGGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 20 AVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQA 70
+VY K+ D+Y + + +G G V L +T K+ A+K I I RE D A
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 71 IR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
+ E+E K HP I+ + + +VL G L + + VG
Sbjct: 62 VETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVVG 107
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
+ F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL--------- 155
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICL 213
Query: 247 FKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 26 DKYYIVEKI-GEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH-HKTFVHP 83
D Y + E + GEG + V + T + YA+K I +++ REVE ++ H
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N+L L++ ++ + +L + K N+LE V + S++D L
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFL---- 127
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDN--NPL-LMDLGSVAPAVVKVCGSAEAQ 200
H+ AHRDLK N+L + N +P+ + D G + +K+ G
Sbjct: 128 ---------HNK---GIAHRDLKPENILCEHPNQVSPVKICDFG--LGSGIKLNGDCSPI 173
Query: 201 NLQDVAAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMCYFKSPF------D 252
+ ++ S Y APE+ + + D+R D+WSLG +LY + PF D
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
Query: 253 TVYERGDSVAL-------AVISGNITFPEN 275
++RG++ ++ G FP+
Sbjct: 234 CGWDRGEACPACQNMLFESIQEGKYEFPDK 263
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 20 AVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQA 70
+VY K+ D+Y + + +G G V L +T K+ A+K I I RE D A
Sbjct: 1 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN 60
Query: 71 IR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG 129
+ E+E K HP I+ + + +VL G L + + VG
Sbjct: 61 VETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVVG 106
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
+ F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 107 NKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL--------- 154
Query: 190 VVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCY 246
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 155 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICL 212
Query: 247 FKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 213 SGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI---ICHGREDQAQAIREVEHHKT 79
+ D Y + E IG G + V + K++ A+K+I C D+ ++E++
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQ 69
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE-LRSVGKHYMSSVD- 137
HPNI+ + ++ +V+ G++ + ++ + + G+H +D
Sbjct: 70 CHHPNIVSYYTSFVV---------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 138 --ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
I + ++ E ++ H I HRD+K N+LL D + + D G A + G
Sbjct: 121 STIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG--VSAFLATGG 175
Query: 196 SAEAQNLQDV-AAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ C M APE+ V Y D + D+WS G + +P+
Sbjct: 176 DITRNKVRKTFVGTPCWM---APEVMEQVRGY---DFKADIWSFGITAIELATGAAPY 227
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 56/245 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
+ + I++ IG G F V++++ K +A+K + N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKIL------------------------NK 109
Query: 86 LPLLDHALTGC----ADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
+L A T C D ++N S+ + L Y +D L V +Y+ D+L +
Sbjct: 110 WEMLKRAETACFREERDVLVNGDSKWITTLHY----AFQDDNNLYLVMDYYVGG-DLLTL 164
Query: 142 FLK-------------ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
K + E V + Y HRD+K N+L+ + + L D GS
Sbjct: 165 LSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGS--- 221
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHV--DSYCVVDQRTDVWSLGCLLYAMCY 246
+K+ Q+ V + Y +PE+ D WSLG +Y M Y
Sbjct: 222 -CLKLMEDGTVQSSVAVG----TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY 276
Query: 247 FKSPF 251
++PF
Sbjct: 277 GETPF 281
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 82
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 83 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 129
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 177
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 178 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 218
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILP 87
+V++IG+G + V + + K A+K ++A RE E ++T + H NIL
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGEK--VAVKVFFT---TEEASWFRETEIYQTVLMRHENILG 95
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTL-----ANDLELRSVGKHYMSSVDILKMF 142
+ + G S +Q+ ++ Y+ G+L + L+ +S+ K SSV L
Sbjct: 96 FIAADIKGTG-----SWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGL--- 147
Query: 143 LKICEA-VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
C ++F A AHRDLK+ N+L+ + + DLG +A + +
Sbjct: 148 ---CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG-LAVKFISDTNEVDIPP 203
Query: 202 LQDVAAERCSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLY 242
V +R Y PE+ H SY + D++S G +L+
Sbjct: 204 NTRVGTKR----YMPPEVLDESLNRNHFQSYIMA----DMYSFGLILW 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 27 KYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++ +++ +G+G F V L++ S ++ YA+K + + ++ + +T +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-------KKATLKVRDRVRTKMER 78
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+IL ++H + ++ ++L + G L L K M + + +K +L
Sbjct: 79 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 133
Query: 144 -KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
++ A+ H + +RDLK N+LL + + L D G S E+ +
Sbjct: 134 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----------SKESIDH 180
Query: 203 QDVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A C ++ Y APE+ + + Q D WS G L++ M PF
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPF 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 27 KYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++ +++ +G+G F V L++ S ++ YA+K + + ++ + +T +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-------KKATLKVRDRVRTKMER 77
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+IL ++H + ++ ++L + G L L K M + + +K +L
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 132
Query: 144 -KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
++ A+ H + +RDLK N+LL + + L D G S E+ +
Sbjct: 133 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----------SKESIDH 179
Query: 203 QDVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A C ++ Y APE+ + + Q D WS G L++ M PF
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPF 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 95/250 (38%), Gaps = 30/250 (12%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D + + +G+G F V L +T YA+K + ++D +VE T I
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVL----KKDVILQDDDVE--CTMTEKRI 76
Query: 86 LPLL-DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L L +H + ++ V+ + G DL +
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGG----DLMFHIQKSRRFDEARARFYAAE 132
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
I A+ HD K I Y RDLK NVLL ++ + L D G +C
Sbjct: 133 IISALMFLHD-KGIIY--RDLKLDNVLLDHEGHCKLADFGMCKEG---ICNGV------- 179
Query: 205 VAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
A C P Y APE+ Y D W++G LLY M +PF+ E D +
Sbjct: 180 TTATFCGTPDYIAPEILQEMLYGPA---VDWWAMGVLLYEMLCGHAPFEA--ENEDDLFE 234
Query: 264 AVISGNITFP 273
A+++ + +P
Sbjct: 235 AILNDEVVYP 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 31 VEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPNILP 87
+ +IG G F V + + A+KK+ G+ E I+EV + HPN +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI- 78
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
GC + T+ ++M Y G+ ++ LE V K + V+I + +
Sbjct: 79 ----QYRGCY--LREHTAWLVM---EYCLGSASDLLE---VHKKPLQEVEIAAVTHGALQ 126
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H I HRD+K N+LL+ P L+ LG A + A
Sbjct: 127 GLAYLHSHNMI---HRDVKAGNILLS---EPGLVKLGDFGSASIMAP-----------AN 169
Query: 208 ERCSMPYR-APELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APE+ D + DVWSLG + K P
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 47/242 (19%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALK----KIICHGREDQAQAIREVE 75
++ + + ++ +G+GG+ V + + T K +A+K +I +D A E
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
+ HP I+ L+ TG ++ ++L Y G L LE + +M
Sbjct: 74 ILEEVKHPFIVDLIYAFQTG---------GKLYLILEYLSGGELFMQLEREGI---FMED 121
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG----SVAPAVV 191
+ +I A+ H K I Y RDLK N++L + + L D G S+ V
Sbjct: 122 TACFYL-AEISMALGHLHQ-KGIIY--RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 192 --KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
CG+ E Y APE+ + ++ D WSLG L+Y M
Sbjct: 178 THXFCGTIE---------------YMAPEILMRSGH---NRAVDWWSLGALMYDMLTGAP 219
Query: 250 PF 251
PF
Sbjct: 220 PF 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 66
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 122
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 123 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKTFCG 167
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 168 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 47/242 (19%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALK----KIICHGREDQAQAIREVE 75
++ + + ++ +G+GG+ V + + T K +A+K +I +D A E
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
+ HP I+ L+ TG ++ ++L Y G L LE + +M
Sbjct: 74 ILEEVKHPFIVDLIYAFQTG---------GKLYLILEYLSGGELFMQLEREGI---FMED 121
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG----SVAPAVV 191
+ +I A+ H K I Y RDLK N++L + + L D G S+ V
Sbjct: 122 TACFYL-AEISMALGHLHQ-KGIIY--RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 192 K--VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS 249
CG+ E Y APE+ + ++ D WSLG L+Y M
Sbjct: 178 THTFCGTIE---------------YMAPEILMRSGH---NRAVDWWSLGALMYDMLTGAP 219
Query: 250 PF 251
PF
Sbjct: 220 PF 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 42/270 (15%)
Query: 19 EAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQ 69
++VY K+ D+Y + + +G G V L +T K+ A++ I I RE D A
Sbjct: 140 QSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL 199
Query: 70 AIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
+ E+E K HP I+ + + +VL G L + + V
Sbjct: 200 NVETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVV 245
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
G + F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL-------- 294
Query: 189 AVVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 295 --IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-IC 351
Query: 246 YFKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 352 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 113
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 114 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 160
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 208
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 209 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 249
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 156
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 157 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 203
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 251
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 252 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 292
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ +D+ RE++ + H NI+ L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 97 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 191
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 192 NVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 105
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 106 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 152
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 200
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 201 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 82 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 128
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E +
Sbjct: 129 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTL---- 177
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 178 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 111
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 112 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 158
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 206
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 207 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 247
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 42/270 (15%)
Query: 19 EAVYVKS--DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGRE-DQAQ 69
++VY K+ D+Y + + +G G V L +T K+ A++ I I RE D A
Sbjct: 126 QSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL 185
Query: 70 AIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
+ E+E K HP I+ + + +VL G L + + V
Sbjct: 186 NVETEIEILKKLNHPCIIKIKN----------FFDAEDYYIVLELMEGGELFD----KVV 231
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
G + F ++ AV+ H+ I HRDLK NVLL++ L
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLHENGII---HRDLKPENVLLSSQEEDCL-------- 280
Query: 189 AVVKVCGSAEAQNLQDVAAER--CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+K+ ++ L + + R C P Y APE+ ++ D WSLG +L+ +C
Sbjct: 281 --IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-IC 337
Query: 246 YFKSPFDTVYERGDSVALAVISGNITF-PE 274
P + + S+ + SG F PE
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 133 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 184
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 185 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 82 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 128
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E +
Sbjct: 129 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTL---- 177
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 178 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 24/250 (9%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V ++ + YA+KKI H E + + EV + H ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 94 --TGCADPV--LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
P+ + S + + + Y TL + + ++ + + ++F +I EA+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ---RDEYWRLFRQILEAL 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG--SAEAQNL----Q 203
H I HRDLK N+ + N + D G +A V + ++QNL
Sbjct: 130 SYIHSQGII---HRDLKPMNIFIDESRNVKIGDFG-LAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
++ + + Y A E+ +D +++ D++SLG + + M Y PF T ER + +
Sbjct: 186 NLTSAIGTAMYVATEV--LDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN-ILK 239
Query: 264 AVISGNITFP 273
+ S +I FP
Sbjct: 240 KLRSVSIEFP 249
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 27 KYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++ +++ +G+G F V L++ S ++ YA+K + + ++ + +T +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-------KKATLKVRDRVRTKMER 77
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+IL ++H + ++ ++L + G L L K M + + +K +L
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 132
Query: 144 -KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
++ A+ H + +RDLK N+LL + + L D G S E+ +
Sbjct: 133 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL----------SKESIDH 179
Query: 203 QDVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ A C ++ Y APE+ + + Q D WS G L++ M PF
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHT---QSADWWSFGVLMFEMLTGTLPF 226
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 127 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 178
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 179 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
Y + IG G F V + + + A+KK++ +D+ RE++ + H NI+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 115
Query: 88 L--LDHALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
L ++ D V LN +VL Y P+ + V +HY + L +
Sbjct: 116 LRYFFYSSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYV 162
Query: 145 ICEAVKVFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
++F I HRD+K N+LL D AV+K+C A+
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQ 210
Query: 202 L---QDVAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
L + + CS YRAPEL F Y DVWS GC+L
Sbjct: 211 LVRGEPNVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 251
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ + +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 39/227 (17%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIREVEHHKTFVHPNILP 87
+G+GGF+ I + TK+ +A K + H RE + E+ H++ H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 85
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
H V +VL + +L LEL K ++ + +I
Sbjct: 86 F--HGF-------FEDNDFVFVVLELCRRRSL---LELHKRRK-ALTEPEARYYLRQIVL 132
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H + I HRDLK N+ L D + D G KV E +
Sbjct: 133 GCQYLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTL---- 181
Query: 208 ERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
C P Y APE+ + DVWS+GC++Y + K PF+T
Sbjct: 182 --CGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFET 223
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 126 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 177
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 178 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 127 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 178
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 179 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 23 VKSDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
V S +Y IV+ +GEG F V I+H + A+K I + +A R
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK--IVKNVDRYCEAAR--------- 59
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP-KGTLANDLELRSVGKHYMSSVD--- 137
+ + +L+H T DP NST + + +L ++ G + EL + + +
Sbjct: 60 --SEIQVLEHLNT--TDP--NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFL 113
Query: 138 ------ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDN-----NP-LLMDLGS 185
I KM +IC++V H K H DLK N+L + NP + D +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 186 VAPAVVKVC--GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ +KV GSA + + + + YRAPE+ + Q DVWS+GC+L
Sbjct: 171 LINPDIKVVDFGSATYDD-EHHSTLVSTRHYRAPEVILALGWS---QPCDVWSIGCIL 224
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 66
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 122
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 123 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKXFCG 167
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 168 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 37/224 (16%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 66
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 122
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLG------SVAPAVVKVCGSAEAQNLQDVAA 207
++ + Y RD+K N++L D + + D G S + CG+ E
Sbjct: 123 -SRDVVY--RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE--------- 170
Query: 208 ERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 171 ------YLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 71
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 127
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 128 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKXFCG 172
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 173 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 66
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 122
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 123 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKTFCG 167
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 168 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 26 DKYYIV-EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAI------REVEHHK 78
D YY E++G G F+ V T +YA K I + + + REV K
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 79 TFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDI 138
HPN++ L + V + + V+++ G L + L K ++ +
Sbjct: 70 EIQHPNVITLHE---------VYENKTDVILIGELVAGGELFDFL----AEKESLTEEEA 116
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP----LLMDLGSVAPAVVKVC 194
+ +I V H + AH DLK N++L + N P ++D G K+
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KID 169
Query: 195 GSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
E +N+ + + APE+ + Y + D+WS+G + Y + SPF
Sbjct: 170 FGNEFKNI------FGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVV 191
++ DI +I +A+ H + HRD+K NV++ +++ L L+D G +
Sbjct: 128 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG-----LA 179
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + N++ VA S ++ PEL VD Y + D D+WSLGC+L +M + K PF
Sbjct: 180 EFYHPGQEYNVR-VA----SRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 66
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 122
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 123 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKXFCG 167
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 168 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ + +A RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHAL 93
+G+G F V L+ T + YA+K + R++ A EV H T +L H
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKIL----RKEVIIAKDEVAH--TVTESRVLQNTRHPF 69
Query: 94 TGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFH 153
+ ++ V+ Y G L L V + +I A++ H
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF----YGAEIVSALEYLH 125
Query: 154 DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CS 211
++ + Y RD+K N++L D + + D G +C + + D A + C
Sbjct: 126 -SRDVVY--RDIKLENLMLDKDGHIKITDFG--------LC----KEGISDGATMKTFCG 170
Query: 212 MP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
P Y APE+ + Y + D W LG ++Y M + PF
Sbjct: 171 TPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 12 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 66
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 67 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASG 115
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 116 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 167
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 168 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ + +A RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P+ + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPE-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSYICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 37/253 (14%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLL 89
+V+K+G G F V + ++ + K K + G + E KT H ++ L
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRL- 72
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
+A+ +P+ ++ + KG+L + L+ GK + ++ +I E +
Sbjct: 73 -YAVVTKEEPIY-------IITEFMAKGSLLDFLKSDEGGKVLLPK--LIDFSAQIAEGM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
Y HRDL+ ANVL++ + D G + +V E A E
Sbjct: 123 AYIERKN---YIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNEY-----TAREG 169
Query: 210 CSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPFDTVYERGDSVALAVI 266
P + APE + + + +++VWS G LLY + Y K P+ R ++ ++ +
Sbjct: 170 AKFPIKWTAPEAINFGCFTI---KSNVWSFGILLYEIVTYGKIPYPG---RTNADVMSAL 223
Query: 267 SGNITFP--ENTP 277
S P EN P
Sbjct: 224 SQGYRMPRMENCP 236
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 15 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 69
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 70 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASG 118
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 119 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 170
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 171 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 218
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 89/218 (40%), Gaps = 42/218 (19%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPL--LDH 91
IG G F V + + + A+KK++ + +A RE++ + H NI+ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 92 ALTGCADPV-LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ D V LN +VL Y P + V +HY + L + +
Sbjct: 84 SSGEKKDEVYLN------LVLDYVPA-------TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 151 VFHDAKPI---AYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL---QD 204
+F I HRD+K N+LL D AV+K+C A+ L +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDT------------AVLKLCDFGSAKQLVRGEP 178
Query: 205 VAAERCSMPYRAPEL-FHVDSYCVVDQRTDVWSLGCLL 241
+ CS YRAPEL F Y DVWS GC+L
Sbjct: 179 NVSXICSRYYRAPELIFGATDYT---SSIDVWSAGCVL 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 35 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 89
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 90 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASG 138
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 139 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 190
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 191 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 9 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 63
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 64 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASG 112
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 113 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 164
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 212
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D Y +V K+G G +S V + +R +K + ++ + ++ +E+ + N
Sbjct: 37 QDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGT--N 94
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L+D DPV + + V + N+ + + + + ++ DI +
Sbjct: 95 IIKLID----TVKDPVSKTPALVFEYI---------NNTDFKQLYQ-ILTDFDIRFYMYE 140
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +A+ H +K I HRD+K NV++ + L L+D G + + A+ N++
Sbjct: 141 LLKALDYCH-SKGIM--HRDVKPHNVMIDHQQKKLRLIDWG-----LAEFYHPAQEYNVR 192
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
S ++ PEL VD Y + D D+WSLGC+L +M + + PF
Sbjct: 193 -----VASRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 10 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 64
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 65 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASG 113
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 114 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 165
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 166 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 213
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
D Y +V K+G G +S V + +R +K + ++ + ++ +E+ + N
Sbjct: 42 QDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGT--N 99
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ L+D DPV + + V + N+ + + + + ++ DI +
Sbjct: 100 IIKLID----TVKDPVSKTPALVFEYI---------NNTDFKQLYQ-ILTDFDIRFYMYE 145
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +A+ H +K I HRD+K NV++ + L L+D G + + A+ N++
Sbjct: 146 LLKALDYCH-SKGIM--HRDVKPHNVMIDHQQKKLRLIDWG-----LAEFYHPAQEYNVR 197
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
S ++ PEL VD Y + D D+WSLGC+L +M + + PF
Sbjct: 198 -----VASRYFKGPELL-VD-YQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 26/97 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVA-----PAVVKVCGSAEAQNLQDVAAERCSM--PY 214
HRD+K N+++A D L+D GS A CG+ E A M PY
Sbjct: 153 HRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE------YCAPEVLMGNPY 206
Query: 215 RAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
R PEL ++WSLG LY + + ++PF
Sbjct: 207 RGPEL-------------EMWSLGVTLYTLVFEENPF 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 28/150 (18%)
Query: 105 SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRD 164
S++ +++ Y G+ L+L G I M +I + + H K I HRD
Sbjct: 94 SKLWIIMEYLGGGSA---LDLLRAGP--FDEFQIATMLKEILKGLDYLHSEKKI---HRD 145
Query: 165 LKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP----YRAPELF 220
+K ANVLL+ + L D G V G L D +R + + APE+
Sbjct: 146 IKAANVLLSEQGDVKLADFG--------VAG-----QLTDTQIKRNTFVGTPFWMAPEVI 192
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+Y D + D+WSLG + + P
Sbjct: 193 QQSAY---DSKADIWSLGITAIELAKGEPP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV--HPNILPLL 89
E IG+G F V + A+K I RE+++ RE E ++T + H NIL +
Sbjct: 48 ESIGKGRFGEV--WRGKWRGEEVAVK--IFSSREERSW-FREAEIYQTVMLRHENILGFI 102
Query: 90 DHALTGCADPVLNST-SQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
AD N T +Q+ +V Y+ G+L + L ++ ++ ++K+ L
Sbjct: 103 ------AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASG 151
Query: 149 VKVFH------DAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL 202
+ H KP A AHRDLK+ N+L+ + + DLG A +
Sbjct: 152 LAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVR-------HDSATDT 203
Query: 203 QDVAAER--CSMPYRAPELF-------HVDSYCVVDQRTDVWSLGCLLYAMC 245
D+A + Y APE+ H +S+ +R D++++G + + +
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF----KRADIYAMGLVFWEIA 251
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++T R A+KK+ I H + + R
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK----RTYR 70
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 121
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFYLARHTDDE 178
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ ++ +Q D+WS+GC++ + ++ F
Sbjct: 179 MTG---------YVATRW---YRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRD+K +N+LL N L D G V + + +A C PY APE
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG---------CR-PYMAPERID 198
Query: 222 VD-SYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
S D R+DVWSLG LY + + P+
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 23/142 (16%)
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVA-------PAVV 191
L +F++I EAV+ H HRDLK +N+ D+ + D G V V
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A A + V + Y +PE H ++Y + D++SLG +L+ + Y F
Sbjct: 224 LTPMPAYATHXGQVGTKL----YMSPEQIHGNNYS---HKVDIFSLGLILFELLY---SF 273
Query: 252 DTVYERGDSVALAVISGNITFP 273
T ER V + N+ FP
Sbjct: 274 STQMER---VRIITDVRNLKFP 292
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 47/240 (19%)
Query: 23 VKSDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
V S +Y IV+ +GEG F V I+H + A+K I + +A R
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK--IVKNVDRYCEAAR--------- 59
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP-KGTLANDLELRSVGKHYMSSVD--- 137
+ + +L+H T DP NST + + +L ++ G + EL + + +
Sbjct: 60 --SEIQVLEHLNT--TDP--NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFL 113
Query: 138 ------ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDN-----NP-LLMDLGS 185
I KM +IC++V H K H DLK N+L + NP + D +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 186 VAPAVVKVC--GSA--EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ +KV GSA + ++ + R YRAPE+ + Q DVWS+GC+L
Sbjct: 171 LINPDIKVVDFGSATYDDEHHSTLVXXR---HYRAPEVILALGWS---QPCDVWSIGCIL 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+IC ++ H + + +RDLK N+LL + + + DLG V V E Q ++
Sbjct: 294 EICCGLEDLHRERIV---YRDLKPENILLDDHGHIRISDLG----LAVHV---PEGQTIK 343
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ Y APE+ + Y D W+LGCLLY M +SPF
Sbjct: 344 GRVG---TVGYMAPEVVKNERYTFS---PDWWALGCLLYEMIAGQSPF 385
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G F V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 18 KLGGGQFGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 74 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G ++ + +A A +
Sbjct: 123 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG-LSRLMTGDTXTAHA-------GAK 171
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 172 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRDLK+ N+ L DN + D G +A + GS + + L S+ + APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFG-LATEKSRWSGSHQFEQLS------GSILWMAPEVIR 195
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNIT 271
+ ++DV++ G +LY + + P+ + R D + V G+++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLS 244
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+IC ++ H + + +RDLK N+LL + + + DLG V V E Q ++
Sbjct: 294 EICCGLEDLHRERIV---YRDLKPENILLDDHGHIRISDLG----LAVHV---PEGQTIK 343
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
++ Y APE+ + Y D W+LGCLLY M +SPF
Sbjct: 344 GRVG---TVGYMAPEVVKNERYTFS---PDWWALGCLLYEMIAGQSPF 385
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRDLK+ N+ L DN + D G +A + GS + + L S+ + APE+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFG-LATVKSRWSGSHQFEQLS------GSILWMAPEVIR 183
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNIT 271
+ ++DV++ G +LY + + P+ + R D + V G+++
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLS 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 18 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +++ + G L + LR + +S+V +L M +I A+
Sbjct: 74 G---------VCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G ++ + +A A +
Sbjct: 123 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG-LSRLMTGDTXTAHA-------GAK 171
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 172 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 211
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 94/251 (37%), Gaps = 63/251 (25%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQA-----QAIREV---EH 76
+ +Y V +IG G + TV + ALK + +REV
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-------G 129
+ F HPN++ L+D CA + +V +V + D +LR+ G
Sbjct: 68 LEAFEHPNVVRLMDV----CATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPG 116
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG----- 184
+ D+++ FL+ + F A I HRDLK N+L+ + L D G
Sbjct: 117 LPAETIKDLMRQFLRGLD----FLHANCIV--HRDLKPENILVTSGGTVKLADFGLARIY 170
Query: 185 ----SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCL 240
++ P VV + YRAPE+ +Y D+WS+GC+
Sbjct: 171 SYQMALTPVVVTLW-------------------YRAPEVLLQSTYATP---VDMWSVGCI 208
Query: 241 LYAMCYFKSPF 251
M K F
Sbjct: 209 FAEMFRRKPLF 219
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRDLK+ N+ L DN + D G +A + GS + + L S+ + APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFG-LATEKSRWSGSHQFEQLS------GSILWMAPEVIR 195
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNIT 271
+ ++DV++ G +LY + + P+ + R D + V G+++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLS 244
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +++ + G L + LR + +S+V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
+ +RE+ F HPNIL L D +P ++ V ++ + LA + + +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD-IFVHFEEPAMHKLYLVTELM----RTDLAQVIHDQRI 129
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
+S I I + V H+A + HRDL N+LLA++N+ + D
Sbjct: 130 ---VISPQHIQYFMYHILLGLHVLHEAGVV---HRDLHPGNILLADNNDITICDFN---- 179
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
+ +A+A V YRAPEL V + + D+WS GC++ M K
Sbjct: 180 --LAREDTADANKTHYVTHRW----YRAPEL--VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
Query: 249 SPF 251
+ F
Sbjct: 232 ALF 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
+ +RE+ F HPNIL L D +P ++ V ++ + LA + + +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD-IFVHFEEPAMHKLYLVTELM----RTDLAQVIHDQRI 129
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAP 188
+S I I + V H+A + HRDL N+LLA++N+ + D
Sbjct: 130 ---VISPQHIQYFMYHILLGLHVLHEAGVV---HRDLHPGNILLADNNDITICDFN---- 179
Query: 189 AVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
+ +A+A V YRAPEL V + + D+WS GC++ M K
Sbjct: 180 --LAREDTADANKTHYVTHRW----YRAPEL--VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
Query: 249 SPF 251
+ F
Sbjct: 232 ALF 234
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +++ + G L + LR + +S+V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 35/268 (13%)
Query: 20 AVYVKSDKYYIVEKIGEGGFSTVSL---IEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
A V + + +++ +G G + V L I T K YA+K + + Q + EH
Sbjct: 48 AEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVL---KKATIVQKAKTTEH 104
Query: 77 HKT----FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
+T H P L + +++ ++L Y G L L R +
Sbjct: 105 TRTERQVLEHIRQSPFL-----VTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFT 157
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
V I + E V + +RD+K N+LL ++ + +L D G + K
Sbjct: 158 EHEVQIY-----VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG-----LSK 207
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ E + D ++ Y AP++ D+ D WSLG L+Y + SPF
Sbjct: 208 EFVADETERAYDFCG---TIEYMAPDIVRGGD-SGHDKAVDWWSLGVLMYELLTGASPFT 263
Query: 253 TVYERGDSVALAVISGNITFPENTPFPQ 280
G+ + A IS I E P+PQ
Sbjct: 264 V---DGEKNSQAEISRRILKSE-PPYPQ 287
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 18 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 74 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 123 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTFTAHAGAK 171
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 172 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV A
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLA 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 15 LCSKEAVYVKSDKYYIVEKIGEGGFSTV---SLIEHSQTKKRYALKKIICHGREDQAQA- 70
L E V SD+ IG+G F V I+ +Q + + A+K + Q +A
Sbjct: 15 LIPHERVVTHSDRV-----IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF 69
Query: 71 IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGK 130
+RE + HPN+L AL G P VL LPY G L L+ +
Sbjct: 70 LREGLLMRGLNHPNVL-----ALIGIMLPP-EGLPHVL--LPYMCHGDL---LQFIRSPQ 118
Query: 131 HYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV 190
+ D++ L++ ++ + K + HRDL N +L + D G +
Sbjct: 119 RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFG-----L 170
Query: 191 VKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+ E ++Q R + + A E + ++DVWS G LL+ + +P
Sbjct: 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT---KSDVWSFGVLLWELLTRGAP 227
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 25 SDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE----------I 67
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD------ 137
N+L + N VLM + G + EL +GK+ +
Sbjct: 68 NVLKKIK------EKDKENKFLCVLMSDWFNFHGHMCIAFEL--LGKNTFEFLKENNFQP 119
Query: 138 -----ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLM------DLGSV 186
+ M ++C A++ H+ + H DLK N+L N L + SV
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 187 APAVVKVC--GSA--EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
++V GSA + ++ + A R YR PE+ + Q DVWS+GC+L+
Sbjct: 177 KNTSIRVADFGSATFDHEHHTTIVATR---HYRPPEVILELGWA---QPCDVWSIGCILF 230
Query: 243 AMCYFKSPFDTVYERGDSVALAVISGNI 270
+ F T R V + I G I
Sbjct: 231 EYYRGFTLFQTHENREHLVMMEKILGPI 258
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLXQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLXGIKHLHSAGII---HRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI------ICHGREDQAQAIR 72
+ ++ ++Y + +G G + +V ++ + A+KK+ I H + + R
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK----RTYR 99
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
E+ K H N++ LLD + N V ++ G N++ V
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-----GADLNNI----VKCQK 150
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
++ + + +I +K H A I HRDLK +N+ + D ++D G +
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHTDDE 207
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ G A R YRAPE+ + ++ + D+WS+GC++ + ++ F
Sbjct: 208 MTG---------YVATRW---YRAPEI--MLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 98/251 (39%), Gaps = 44/251 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVG------- 129
K H NI+ LL C + +++ Y KG L L+ R
Sbjct: 88 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 130 -----KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ +SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 195
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 196 -LARDIHHIDXXKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 245
Query: 245 CYF-KSPFDTV 254
SP+ V
Sbjct: 246 FTLGGSPYPGV 256
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 81 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 130 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 178
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 179 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 25 SDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 27 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE----------I 76
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD------ 137
N+L + N VLM + G + EL +GK+ +
Sbjct: 77 NVLKKIK------EKDKENKFLCVLMSDWFNFHGHMCIAFEL--LGKNTFEFLKENNFQP 128
Query: 138 -----ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLM------DLGSV 186
+ M ++C A++ H+ + H DLK N+L N L + SV
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 185
Query: 187 APAVVKVC--GSA--EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
++V GSA + ++ + A R YR PE+ + Q DVWS+GC+L+
Sbjct: 186 KNTSIRVADFGSATFDHEHHTTIVATR---HYRPPEVILELGWA---QPCDVWSIGCILF 239
Query: 243 AMCYFKSPFDTVYERGDSVALAVISGNI 270
+ F T R V + I G I
Sbjct: 240 EYYRGFTLFQTHENREHLVMMEKILGPI 267
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 21 VYVKSDKYYIVE-KIGEGGFSTVSLIEHSQTKKRYALK-KIICHGRE--DQAQAIREVEH 76
+++K D I + ++G G F +V + KK+ + K++ G E D + +RE +
Sbjct: 4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 63
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
+P I+ L+ + +++V+ G L L VGK V
Sbjct: 64 MHQLDNPYIVRLIG----------VCQAEALMLVMEMAGGGPLHKFL----VGKREEIPV 109
Query: 137 -DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ ++ ++ +K + + HRDL NVLL N + + D G + K G
Sbjct: 110 SNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFG-----LSKALG 161
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTV 254
A+ +A + + + APE + + R+DVWS G ++ A+ Y + P+ +
Sbjct: 162 -ADDSYYTARSAGKWPLKWYAPECINFRKF---SSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 29/242 (11%)
Query: 13 GCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIR 72
G E +Y +S ++E G F V +Q Y KI + Q
Sbjct: 11 GVDLGTENLYFQSMPLQLLEVKARGRFGCVW---KAQLLNEYVAVKIFPIQDKQSWQNEY 67
Query: 73 EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY 132
EV H NIL + G + V + ++ ++ KG+L++ L+ V +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDV-----DLWLITAFHEKGSLSDFLKANVVSWNE 122
Query: 133 MSSV--DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG-SVAPA 189
+ + + + + E + D A +HRD+K+ NVLL N+ + D G ++
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 190 VVKVCGSAEAQNLQDVAAERCSMPYRAPEL------FHVDSYCVVDQRTDVWSLGCLLYA 243
K G Q V R Y APE+ F D++ R D++++G +L+
Sbjct: 183 AGKSAGDTHGQ----VGTRR----YMAPEVLEGAINFQRDAFL----RIDMYAMGLVLWE 230
Query: 244 MC 245
+
Sbjct: 231 LA 232
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 25 SDKYYIVEKIGEGGFS-TVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHP 83
++Y IV +GEG F V ++H++ K + ALK I G+ +A +
Sbjct: 50 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE----------I 99
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD------ 137
N+L + N VLM + G + EL +GK+ +
Sbjct: 100 NVLKKIK------EKDKENKFLCVLMSDWFNFHGHMCIAFEL--LGKNTFEFLKENNFQP 151
Query: 138 -----ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLM------DLGSV 186
+ M ++C A++ H+ + H DLK N+L N L + SV
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 208
Query: 187 APAVVKVC--GSA--EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
++V GSA + ++ + A R YR PE+ + Q DVWS+GC+L+
Sbjct: 209 KNTSIRVADFGSATFDHEHHTTIVATR---HYRPPEVILELGWA---QPCDVWSIGCILF 262
Query: 243 AMCYFKSPFDTVYERGDSVALAVISGNI 270
+ F T R V + I G I
Sbjct: 263 EYYRGFTLFQTHENREHLVMMEKILGPI 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 21 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +++ + G L + LR + +++V +L M +I A+
Sbjct: 77 G---------VCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 125
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G ++ + +A A +
Sbjct: 126 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG-LSRLMTGDTXTAHA-------GAK 174
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 175 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 86 LPLLDHA-----LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
+PL++H + G + + L+V+ YYP G+L L L H V +
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCR 115
Query: 141 MFLKICEAVKVFHDAKPI------AYAHRDLKTANVLLANDNNPLLMDLG-SVAPAVVKV 193
+ + + H P A +HRDL + NVL+ ND ++ D G S+ ++
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELFH-----VDSYCVVDQRTDVWSLGCLLYAM 244
E N +E ++ Y APE+ D + Q D+++LG + + +
Sbjct: 176 VRPGEEDNA--AISEVGTIRYMAPEVLEGAVNLRDXESALKQ-VDMYALGLIYWEI 228
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 42/269 (15%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE 75
K+A + + + +K+G G F V + +++ K K + G + E
Sbjct: 5 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEAN 62
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
KT H ++ L HA+ + + ++ + KG+L + L+ K +
Sbjct: 63 VMKTLQHDKLVKL--HAVV--------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 112
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ +I E + Y HRDL+ AN+L++ A V K+
Sbjct: 113 --LIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS-------------ASLVCKIAD 154
Query: 196 SAEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKS 249
A+ ++D A E P + APE + S+ + ++DVWS G LL + Y +
Sbjct: 155 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI---KSDVWSFGILLMEIVTYGRI 211
Query: 250 PFDTVYERGDSVALAVISG-NITFPENTP 277
P+ + V A+ G + PEN P
Sbjct: 212 PYPGM--SNPEVIRALERGYRMPRPENCP 238
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 14 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 71 GYS----------TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 117
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D L + +G A VK S Q Q
Sbjct: 118 DYLH-AKSII--HRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSG--- 168
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 169 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 226
Query: 270 IT 271
++
Sbjct: 227 LS 228
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 78 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLXQVIQMELDHERMSYLLYQ 127
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 128 MLXGIKHLHSAGII---HRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFM----- 174
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 175 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
+RDLK NVLL +D N + DLG AV G + + + APEL
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPG------FMAPELLL 362
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALA--VISGNITFPEN 275
+ Y D D ++LG LY M + PF E+ ++ L V+ +T+P+
Sbjct: 363 GEEY---DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 54/257 (21%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHG-------------- 63
V+ ++Y + ++IG+G + V L + YA+K K+I
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 64 -------REDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPK 116
R Q +E+ K HPN++ L++ DP + + MV +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV----LDDP---NEDHLYMVFELVNQ 122
Query: 117 GTLANDLELRSVGKHYMSSVDILKMFLK-ICEAVKVFHDAKPIAYAHRDLKTANVLLAND 175
G + L+ + S D + + + + + ++ H K I HRD+K +N+L+ D
Sbjct: 123 GPVMEVPTLKPL------SEDQARFYFQDLIKGIEYLHYQKII---HRDIKPSNLLVGED 173
Query: 176 NNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDV 234
+ + D G S E + + + P + APE + DV
Sbjct: 174 GHIKIADFGV----------SNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDV 223
Query: 235 WSLGCLLYAMCYFKSPF 251
W++G LY + + PF
Sbjct: 224 WAMGVTLYCFVFGQCPF 240
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
+RDLK NVLL +D N + DLG AV G + + + APEL
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPG------FMAPELLL 362
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALA--VISGNITFPEN 275
+ Y D D ++LG LY M + PF E+ ++ L V+ +T+P+
Sbjct: 363 GEEY---DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
+RDLK NVLL +D N + DLG AV G + + + APEL
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPG------FMAPELLL 362
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALA--VISGNITFPEN 275
+ Y D D ++LG LY M + PF E+ ++ L V+ +T+P+
Sbjct: 363 GEEY---DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V +++ + G L + LR + +++V +L M +I A+
Sbjct: 81 G---------VCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 130 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 178
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 179 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
+RDLK NVLL +D N + DLG AV G + + + APEL
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPG------FMAPELLL 362
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALA--VISGNITFPEN 275
+ Y D D ++LG LY M + PF E+ ++ L V+ +T+P+
Sbjct: 363 GEEY---DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 14 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 71 GYS----------TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 117
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D L + +G A VK S Q Q
Sbjct: 118 DYLH-AKSII--HRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSG--- 168
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 169 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 226
Query: 270 IT 271
++
Sbjct: 227 LS 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 21/227 (9%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILP 87
+ +VE +G G + V H +T + A+K + G E++ + +E+ K + H +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE-EIKQEINMLKKYSHHRNIA 84
Query: 88 LLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICE 147
A P ++ Q+ +V+ + G++ DL +++ + + I + +I
Sbjct: 85 TYYGAFIKKNPPGMDD--QLWLVMEFCGAGSVT-DL-IKNTKGNTLKEEWIAYICREILR 140
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+ H K I HRD+K NVLL + L+D G V+ + + G
Sbjct: 141 GLSHLHQHKVI---HRDIKGQNVLLTENAEVKLVDFG-VSAQLDRTVGRRNT-------- 188
Query: 208 ERCSMPYR-APELFHVDSY--CVVDQRTDVWSLGCLLYAMCYFKSPF 251
PY APE+ D D ++D+WSLG M P
Sbjct: 189 -FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE 75
K+A + + + +K+G G F V + +++ K K + G + E
Sbjct: 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEAN 235
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
KT H ++ L HA+ + + ++ + KG+L + L+ K +
Sbjct: 236 VMKTLQHDKLVKL--HAVV--------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 285
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ +I E + Y HRDL+ AN+L++ A V K+
Sbjct: 286 --LIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS-------------ASLVCKIAD 327
Query: 196 SAEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKS 249
A+ ++D A E P + APE + S+ + ++DVWS G LL + Y +
Sbjct: 328 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI---KSDVWSFGILLMEIVTYGRI 384
Query: 250 PF 251
P+
Sbjct: 385 PY 386
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 88 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 195
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 196 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 245
Query: 245 CYF-KSPFDTV 254
SP+ V
Sbjct: 246 FTLGGSPYPGV 256
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLXQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLXGIKHLHSAGII---HRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 129 KMIGKHKNIINLLG----ACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 236
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 237 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 286
Query: 245 CYF-KSPFDTV 254
SP+ V
Sbjct: 287 FTLGGSPYPGV 297
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRE 65
N + +G S + + + + ++IG G F TV + A+K + +
Sbjct: 17 NRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTP 73
Query: 66 DQAQAIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
Q QA + EV + H NIL + ++ + Q+ +V + +L + L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYS----------TKPQLAIVTQWCEGSSLYHHLH 123
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ + +DI + + + + H AK I HRDLK+ N+ L D L + +G
Sbjct: 124 IIETKFEMIKLIDIAR---QTAQGMDYLH-AKSII--HRDLKSNNIFLHED---LTVKIG 174
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
A VK S Q Q S+ + APE+ + ++DV++ G +LY +
Sbjct: 175 DFGLATVKSRWSGSHQFEQLSG----SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 245 CYFKSPFDTVYERGDSVALAVISGNIT 271
+ P+ + R D + V G ++
Sbjct: 231 MTGQLPYSNINNR-DQIIFMVGRGYLS 256
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 88 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 195
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 196 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 245
Query: 245 CYF-KSPFDTV 254
SP+ V
Sbjct: 246 FTLGGSPYPGV 256
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 19 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 76 GYS----------TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D L + +G A VK S Q Q
Sbjct: 123 DYLH-AKSII--HRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSG--- 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 174 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 231
Query: 270 IT 271
++
Sbjct: 232 LS 233
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 91 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 138
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 139 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 182
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 183 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 16 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 73 GYS----------TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 119
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D L + +G A VK S Q Q
Sbjct: 120 DYLH-AKSII--HRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSG--- 170
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 171 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 228
Query: 270 IT 271
++
Sbjct: 229 LS 230
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRE 65
N + +G S + + + + ++IG G F TV + A+K + +
Sbjct: 16 NRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTP 72
Query: 66 DQAQAIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
Q QA + EV + H NIL + ++ + Q+ +V + +L + L
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMGYS----------TKPQLAIVTQWCEGSSLYHHLH 122
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ + +DI + + + + H AK I HRDLK+ N+ L D L + +G
Sbjct: 123 IIETKFEMIKLIDIAR---QTAQGMDYLH-AKSII--HRDLKSNNIFLHED---LTVKIG 173
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
A VK S Q Q S+ + APE+ + ++DV++ G +LY +
Sbjct: 174 DFGLATVKSRWSGSHQFEQLSG----SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
Query: 245 CYFKSPFDTVYERGDSVALAVISGNIT 271
+ P+ + R D + V G ++
Sbjct: 230 MTGQLPYSNINNR-DQIIFMVGRGYLS 255
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 74 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 121
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 122 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 165
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 19 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 76 GYS----------TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 122
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D L + +G A VK S Q Q
Sbjct: 123 DYLH-AKSII--HRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSG--- 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 174 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 231
Query: 270 IT 271
++
Sbjct: 232 LS 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLG 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRE 65
N + +G S + + + + ++IG G F TV + A+K + +
Sbjct: 17 NRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTP 73
Query: 66 DQAQAIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
Q QA + EV + H NIL + ++ + Q+ +V + +L + L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYS----------TKPQLAIVTQWCEGSSLYHHLH 123
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ + +DI + + + + H AK I HRDLK+ N+ L D + D G
Sbjct: 124 IIETKFEMIKLIDIAR---QTAQGMDYLH-AKSII--HRDLKSNNIFLHEDLTVKIGDFG 177
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + GS + + L S+ + APE+ + ++DV++ G +LY +
Sbjct: 178 -LATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 245 CYFKSPFDTVYERGDSVALAVISGNIT 271
+ P+ + R D + V G ++
Sbjct: 231 MTGQLPYSNINNR-DQIIFMVGRGYLS 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 32/229 (13%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNI 85
D Y I+E++G G F V T + + K I D+ E+ HP +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ L D +++++L + G L + + + + MS +++ +
Sbjct: 111 INLHD---------AFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQA 158
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNL--- 202
CE +K H+ + H D+K N++ + + VK+ A L
Sbjct: 159 CEGLKHMHEH---SIVHLDIKPENIMCE-----------TKKASSVKIIDFGLATKLNPD 204
Query: 203 QDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ V + + APE+ + V TD+W++G L Y + SPF
Sbjct: 205 EIVKVTTATAEFAAPEIVDREP---VGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 95/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 88 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 195
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 196 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 101 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 148
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 149 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 192
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 95/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 81 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 188
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 189 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 238
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 136
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ AE A E P + APE + +
Sbjct: 137 AANILVSDTLSCKIADFG-----LARLIEDAEX-----TAREGAKFPIKWTAPEAINYGT 186
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 187 FTI---KSDVWSFGILL 200
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 32 EKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTFVHPNILPLL 89
++IG G F TV + A+K + + Q QA + EV + H NIL +
Sbjct: 14 QRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
++ + Q+ +V + +L + L + + +DI + + + +
Sbjct: 71 GYS----------TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGM 117
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
H AK I HRDLK+ N+ L D + D G +A + GS + + L
Sbjct: 118 DYLH-AKSII--HRDLKSNNIFLHEDLTVKIGDFG-LATEKSRWSGSHQFEQLSG----- 168
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGN 269
S+ + APE+ + ++DV++ G +LY + + P+ + R D + V G
Sbjct: 169 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGY 226
Query: 270 IT 271
++
Sbjct: 227 LS 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 21 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 77 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 125
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 126 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAPAGAK 174
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 175 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGRE 65
N + +G S + + + + ++IG G F TV + A+K + +
Sbjct: 9 NRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTP 65
Query: 66 DQAQAIR-EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLE 124
Q QA + EV + H NIL + ++ + Q+ +V + +L + L
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNILLFMGYS----------TKPQLAIVTQWCEGSSLYHHLH 115
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ + +DI + + + + H AK I HRDLK+ N+ L D + D G
Sbjct: 116 IIETKFEMIKLIDIAR---QTAQGMDYLH-AKSII--HRDLKSNNIFLHEDLTVKIGDFG 169
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + GS + + L S+ + APE+ + ++DV++ G +LY +
Sbjct: 170 -LATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
Query: 245 CYFKSPFDTVYERGDSVALAVISGNIT 271
+ P+ + R D + V G ++
Sbjct: 223 MTGQLPYSNINNR-DQIIFMVGRGYLS 248
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 23/122 (18%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I + +I + + H K I HRD+K ANVLL+ L D G
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG-------- 149
Query: 193 VCGSAEAQNLQDVAAERCSMP----YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
V G L D +R + + APE+ +Y D + D+WSLG + +
Sbjct: 150 VAG-----QLTDTQIKRNTFVGTPFWMAPEVIKQSAY---DSKADIWSLGITAIELARGE 201
Query: 249 SP 250
P
Sbjct: 202 PP 203
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 80 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 187
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 188 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 237
Query: 245 CYF-KSPFDTV 254
SP+ V
Sbjct: 238 FTLGGSPYPGV 248
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 23/122 (18%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I + +I + + H K I HRD+K ANVLL+ L D G
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGV------- 170
Query: 193 VCGSAEAQNLQDVAAERCSMP----YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
A L D +R + + APE+ +Y D + D+WSLG + +
Sbjct: 171 ------AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY---DSKADIWSLGITAIELARGE 221
Query: 249 SP 250
P
Sbjct: 222 PP 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 95/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 77 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 184
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 185 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 81 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G ++ + +A A +
Sbjct: 130 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG-LSRLMTGDTXTAHA-------GAK 178
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 179 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 22 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 78 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 126
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 127 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAPAGAK 175
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 176 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 95/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKK-------RYALKKIICHGRE-DQAQAIREVEHH 77
D+ + + +GEG F V L E K + A+K + E D + I E+E
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV-GKHY--- 132
K H NI+ LL C + +++ Y KG L L+ R G Y
Sbjct: 73 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 133 --------MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+SS D++ ++ ++ K I HRDL NVL+ DN + D G
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFG 180
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G LL+ +
Sbjct: 181 -LARDIHHIDYYKKTTN------GRLPVKWMAPEALFDRIYT---HQSDVWSFGVLLWEI 230
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLXQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 107/281 (38%), Gaps = 56/281 (19%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFV-HP 83
KY +V+K+G+G + V +T + A+KKI D + RE+ H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKG----TLANDLELRSVGKHYMSSVDIL 139
NI+ LL+ L D V +V Y AN LE V K Y
Sbjct: 70 NIVNLLN-VLRADND------RDVYLVFDYMETDLHAVIRANILE--PVHKQY------- 113
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAV--------V 191
+ ++ + +K H HRD+K +N+LL + + + D G V +
Sbjct: 114 -VVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 192 KVCGSAEAQN-------LQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYA 243
+ + +N L D A R YRAPE L Y + D+WSLGC+L
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRW---YRAPEILLGSTKYT---KGIDMWSLGCILGE 223
Query: 244 MCYFKSPFDTVYERGDSV--ALAVISGNITFPENTPFPQYQ 282
+ K F G S L I G I FP N Q
Sbjct: 224 ILCGKPIFP-----GSSTMNQLERIIGVIDFPSNEDVESIQ 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 23/122 (18%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I + +I + + H K I HRD+K ANVLL+ L D G
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG-------- 149
Query: 193 VCGSAEAQNLQDVAAER---CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
V G L D +R P + APE+ +Y D + D+WSLG + +
Sbjct: 150 VAG-----QLTDTQIKRNXFVGTPFWMAPEVIKQSAY---DSKADIWSLGITAIELARGE 201
Query: 249 SP 250
P
Sbjct: 202 PP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+ I + +I + + H K I HRD+K ANVLL+ L D G
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG-------- 164
Query: 193 VCGSAEAQNLQDVAAER---CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFK 248
V G L D +R P + APE+ +Y D + D+WSLG + +
Sbjct: 165 VAG-----QLTDTQIKRNXFVGTPFWMAPEVIKQSAY---DSKADIWSLGITAIELARGE 216
Query: 249 SPFDTVY 255
P ++
Sbjct: 217 PPHSELH 223
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 81 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 130 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 178
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 179 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 24 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 80 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 128
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 129 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 177
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 178 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 76 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 124
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 125 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 173
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 174 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 33 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 89 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 137
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 138 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 186
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 187 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 81 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 130 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 178
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 179 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 22 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 78 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 126
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 127 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 175
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 176 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 22 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 78 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 126
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HRDL N L+ ++ + D G + A +
Sbjct: 127 EYLEKKN---FIHRDLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 175
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPF 251
+ + APE + + + ++DVW+ G LL+ + Y SP+
Sbjct: 176 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPY 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 93 LTGCADPVLN-------STSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
L+ C P + ++++ +++ Y G+ + L+ + + Y++++ +I
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATI-----LREI 125
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+ + H + I HRD+K ANVLL+ + L D G V G L D
Sbjct: 126 LKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFG--------VAG-----QLTDT 169
Query: 206 AAER---CSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
+R P + APE+ +Y D + D+WSLG + + P
Sbjct: 170 QIKRNXFVGTPFWMAPEVIKQSAY---DFKADIWSLGITAIELAKGEPP 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 21 VYVKSDKYYIVE-KIGEGGFSTVSLIEHSQTKKRYALK-KIICHGRE--DQAQAIREVEH 76
+++K D I + ++G G F +V + KK+ + K++ G E D + +RE +
Sbjct: 330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 389
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
+P I+ L+ + +++V+ G L L VGK V
Sbjct: 390 MHQLDNPYIVRLIG----------VCQAEALMLVMEMAGGGPLHKFL----VGKREEIPV 435
Query: 137 -DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ ++ ++ +K + + HR+L NVLL N + + D G + K G
Sbjct: 436 SNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFG-----LSKALG 487
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTV 254
A+ +A + + + APE + + R+DVWS G ++ A+ Y + P+ +
Sbjct: 488 -ADDSYYTARSAGKWPLKWYAPECINFRKF---SSRSDVWSYGVTMWEALSYGQKPYKKM 543
Query: 255 YERGDSVALAVISGN 269
+G V + G
Sbjct: 544 --KGPEVMAFIEQGK 556
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALKKIICH-GREDQAQAIREVEHHKTFVHPNI 85
+ +GEG F V L E T ++ A+K + G A +E+E + H NI
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 86 LPLLDHALTG-CADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
+ G C + + + + +++ + P G+L E K+ ++ LK ++
Sbjct: 86 V-----KYKGICTE---DGGNGIKLIMEFLPSGSLK---EYLPKNKNKINLKQQLKYAVQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
IC+ + + Y HRDL NVL+ +++ + D G + + E
Sbjct: 135 ICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFG--------LTKAIETDKEXX 183
Query: 205 VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+ P + APE + + +DVWS G L+ + +
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIA---SDVWSFGVTLHELLTY 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 31 VEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
+ ++G+G F +V L + T A+K++ G + Q RE++ K +H + +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA-LHSDFI 70
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL--- 143
G P L +V+ Y P G L + L+ + + +D ++ L
Sbjct: 71 VKYRGVSYGPGRPELR------LVMEYLPSGCLRDFLQ------RHRARLDASRLLLYSS 118
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+IC+ ++ + + HRDL N+L+ ++ + + D G + K+
Sbjct: 119 QICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFG-----LAKL---LPLDKDX 167
Query: 204 DVAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
V E P + APE S + +++DVWS G +LY +
Sbjct: 168 XVVREPGQSPIFWYAPESL---SDNIFSRQSDVWSFGVVLYEL 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 31 VEKIGEGGFSTVSLI----EHSQTKKRYALKKIICH-GREDQAQAIREVEHHKTFVHPNI 85
+ +GEG F V L E T ++ A+K + G A +E+E + H NI
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 86 LPLLDHALTG-CADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
+ G C + + + + +++ + P G+L E K+ ++ LK ++
Sbjct: 74 V-----KYKGICTE---DGGNGIKLIMEFLPSGSLK---EYLPKNKNKINLKQQLKYAVQ 122
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
IC+ + + Y HRDL NVL+ +++ + D G + E ++D
Sbjct: 123 ICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA----IETDKEXXTVKD 175
Query: 205 VAAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYF 247
+R S + + APE + + +DVWS G L+ + +
Sbjct: 176 ---DRDSPVFWYAPECLMQSKFYIA---SDVWSFGVTLHELLTY 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + + HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGFVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 34 IGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL----PLL 89
+G+G F V ++ + YA+KK I H E + + EV + H ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
+ + S + + Y TL + + ++ + + ++F +I EA+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ---RDEYWRLFRQILEAL 129
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG--SAEAQNL----Q 203
H I HR+LK N+ + N + D G +A V + ++QNL
Sbjct: 130 SYIHSQGII---HRNLKPXNIFIDESRNVKIGDFG-LAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
++ + + Y A E+ +D +++ D +SLG + + Y PF T ER + +
Sbjct: 186 NLTSAIGTAXYVATEV--LDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVN-ILK 239
Query: 264 AVISGNITFP 273
+ S +I FP
Sbjct: 240 KLRSVSIEFP 249
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 137 DIL-KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
DIL K+ + I +A++ H ++ HRD+K +NVL+ + D G V V
Sbjct: 153 DILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+ +A +A ER + PEL + Y V ++D+WSLG + + + P+D+
Sbjct: 211 TIDAGCKPYMAPERIN-----PEL-NQKGYSV---KSDIWSLGITMIELAILRFPYDS 259
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPN 84
+ + E++G GGF V H T ++ A+K+ C +++ + E++ K HPN
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD------- 137
++ + G N L+ + Y G L + Y++ +
Sbjct: 75 VVSARE-VPDGLQKLAPNDLP--LLAMEYCEGGDL----------RKYLNQFENCCGLKE 121
Query: 138 --ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
I + I A++ H+ + I HRDLK N++L L+ + + G
Sbjct: 122 GPIRTLLSDISSALRYLHENRII---HRDLKPENIVLQPGPQRLIHKIIDL--------G 170
Query: 196 SAEAQNLQDVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A+ + ++ E ++ Y APEL Y V D WS G L + PF
Sbjct: 171 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT---VDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 28 YYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR---EDQAQAIREVEHHKTFVHPN 84
+ + E++G GGF V H T ++ A+K+ C +++ + E++ K HPN
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD------- 137
++ + G N L+ + Y G L + Y++ +
Sbjct: 74 VVSARE-VPDGLQKLAPNDLP--LLAMEYCEGGDL----------RKYLNQFENCCGLKE 120
Query: 138 --ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
I + I A++ H+ + I HRDLK N++L L+ + + G
Sbjct: 121 GPIRTLLSDISSALRYLHENRII---HRDLKPENIVLQPGPQRLIHKIIDL--------G 169
Query: 196 SAEAQNLQDVAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
A+ + ++ E ++ Y APEL Y V D WS G L + PF
Sbjct: 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT---VDYWSFGTLAFECITGFRPF 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ V+++ Y G+L D LR + + + ++
Sbjct: 72 FDHPNIIHL---------EGVVTKCKPVMIITEYMENGSL--DAFLRKNDGRF-TVIQLV 119
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D ++Y HRDL N+L+ N N V KV +
Sbjct: 120 GMLRGIGSGMKYLSD---MSYVHRDLAARNILV-NSN------------LVCKVSDFGMS 163
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + APE +Y +DVWS G +++ M Y + P+
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAI---AYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLVGIKHLHSAGII---HRDLKPSNIVVKSDATLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+ + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMI 219
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL-------------ANDNNPLLMDLGS 185
+ + +I V H K I HRDLK N+L+ A + L+ D G
Sbjct: 136 ISLLRQIASGVAHLHSLKII---HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG- 191
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL-YAM 244
+ K S + ++ + +RAPEL + + + D++S+GC+ Y +
Sbjct: 192 ----LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 245 CYFKSPFDTVYERGDSVALAVIS 267
K PF Y R ++ + S
Sbjct: 248 SKGKHPFGDKYSRESNIIRGIFS 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ V+++ Y G+L D LR + + + ++
Sbjct: 66 FDHPNIIHL---------EGVVTKCKPVMIITEYMENGSL--DAFLRKNDGRF-TVIQLV 113
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D ++Y HRDL N+L+ N N V KV +
Sbjct: 114 GMLRGIGSGMKYLSD---MSYVHRDLAARNILV-NSN------------LVCKVSDFGMS 157
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + APE +Y +DVWS G +++ M Y + P+
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAI---AYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V+ Y KG+L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVIEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 33/226 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 227 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +S+V +L M +I A+
Sbjct: 283 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAM 331
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HR+L N L+ ++ + D G + A +
Sbjct: 332 EYLEKKN---FIHRNLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 380
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPFDTV 254
+ + APE + + + ++DVW+ G LL+ + Y SP+ +
Sbjct: 381 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPYPGI 423
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL-------------ANDNNPLLMDLGS 185
+ + +I V H K I HRDLK N+L+ A + L+ D G
Sbjct: 136 ISLLRQIASGVAHLHSLKII---HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG- 191
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL-YAM 244
+ K S + ++ + +RAPEL + + + D++S+GC+ Y +
Sbjct: 192 ----LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 245 CYFKSPFDTVYERGDSVALAVIS 267
K PF Y R ++ + S
Sbjct: 248 SKGKHPFGDKYSRESNIIRGIFS 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 29/248 (11%)
Query: 23 VKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI-ICHGREDQAQAIR-EVEHHKTF 80
+++ + + +IG G F TV + A+K + + +Q QA R EV +
Sbjct: 33 IEASEVMLSTRIGSGSFGTVY---KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
H NIL + + + + +V + +L L ++ +DI +
Sbjct: 90 RHVNILLFMGYM----------TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR 139
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
+ + + H AK I HRD+K+ N+ L + L + +G A VK S
Sbjct: 140 ---QTAQGMDYLH-AKNII--HRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGS-- 188
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDS 260
Q V S+ + APE+ + ++DV+S G +LY + + P+ + R D
Sbjct: 189 --QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQ 245
Query: 261 VALAVISG 268
+ V G
Sbjct: 246 IIFMVGRG 253
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V+ Y KG+L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVIEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ E + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPEVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 144
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 145 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 194
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 195 FTI---KSDVWSFGILL 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 142
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 143 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 192
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 193 FTI---KSDVWSFGILL 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ E + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MEPEVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVCHKILF 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 105/275 (38%), Gaps = 44/275 (16%)
Query: 5 GLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR 64
GL ++FQ + KE + +Y + +G GGF +V +S + L I H
Sbjct: 13 GLEVLFQGPHMKEKEPL---ESQYQVGPLLGSGGFGSV----YSGIRVSDNLPVAIKHVE 65
Query: 65 EDQAQAIREVEHHKTFVHPNILPLLDHALTGCA------DPVLNSTSQVLMVLPYYPKGT 118
+D+ E+ + P + LL +G + D S VL++ P
Sbjct: 66 KDRISDWGELPNGTRV--PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 123
Query: 119 LANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP 178
L + + R + ++ F ++ EAV+ H+ HRD+K N+L+ +
Sbjct: 124 LFDFITERGALQEELAR----SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 176
Query: 179 L-LMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSL 237
L L+D GS A V + + Y PE Y + VWSL
Sbjct: 177 LKLIDFGSGALLKDTVYTDFDGTRV-----------YSPPEWIRYHRYH--GRSAAVWSL 223
Query: 238 GCLLYAMCYFKSPFDTVYERGDSVALAVISGNITF 272
G LLY M PF+ E +I G + F
Sbjct: 224 GILLYDMVCGDIPFEHDEE--------IIRGQVFF 250
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 42/237 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSL-----IEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTF 80
D+ + + +G G F V I+ + T + A+K + + +A+ + K
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL--MSELKIL 84
Query: 81 VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILK 140
+H + + L C P +++++ + G L+ LRS ++ D+ K
Sbjct: 85 IHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLST--YLRSKRNEFVPYKDLYK 138
Query: 141 MFLK----ICEAVKVFHDAKPIA---YAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKV 193
FL IC + +V + +A HRDL N+LL+ N VVK+
Sbjct: 139 DFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN-------------VVKI 185
Query: 194 CGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
C A+++ R + + APE Y + ++DVWS G LL+ +
Sbjct: 186 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWEI 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 145
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 146 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 195
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 196 FTI---KSDVWSFGILL 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 136
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 137 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 186
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 187 FTI---KSDVWSFGILL 200
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 33/251 (13%)
Query: 28 YYIVEKIGEGGFSTVSLIE---HSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPN 84
+ +++ +G+G F V L+ + YA+K + + ++ + +T + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-------KKATLKVRDRVRTKMERD 82
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
IL ++H + ++ ++L + G L L K M + + +K +L
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL- 136
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
E + +RDLK N+LL + + L D G S EA + +
Sbjct: 137 -AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL----------SKEAIDHEK 185
Query: 205 VAAERC-SMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
A C ++ Y APE+ + + D WS G L++ M PF +R +++ L
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHS---HSADWWSYGVLMFEMLTGSLPFQG-KDRKETMTL 241
Query: 264 AVISGNITFPE 274
++ + P+
Sbjct: 242 -ILKAKLGMPQ 251
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 137
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 138 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 187
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 188 FTI---KSDVWSFGILL 201
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 138
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 139 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 188
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 189 FTI---KSDVWSFGILL 202
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 136
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 137 AANILVSDTLSCKIADFG-----LARLIEDNEX-----TAREGAKFPIKWTAPEAINYGT 186
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 187 FTI---KSDVWSFGILL 200
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 146
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 147 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 196
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 197 FTI---KSDVWSFGILL 210
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 123 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 172
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 173 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYV 224
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
V YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 225 VTRY-----YRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 263
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 137 DIL-KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
DIL K+ + I +A++ H ++ HRD+K +NVL+ + D G V V
Sbjct: 109 DILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
+A +A ER + PEL + Y V ++D+WSLG + + + P+D+
Sbjct: 167 DIDAGCKPYMAPERIN-----PEL-NQKGYSV---KSDIWSLGITMIELAILRFPYDS 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ H L C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNII----HLLGACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDATLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+ + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMI 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 123 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 172
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 173 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 219
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 220 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 142
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 143 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 192
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 193 FTI---KSDVWSFGILL 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRD+K N+L++ D+ L+D G + + + L + ++ Y APE F
Sbjct: 157 HRDVKPENILVSADDFAYLVDFG--------IASATTDEKLTQLGNTVGTLYYXAPERF- 207
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
S R D+++L C+LY C SP
Sbjct: 208 --SESHATYRADIYALTCVLYE-CLTGSP 233
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 141
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 142 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 191
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 192 FTI---KSDVWSFGILL 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V G+L D LR + + + ++
Sbjct: 74 FDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSL--DSFLRKHDAQF-TVIQLV 121
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 122 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 165
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V G+L D LR + + + ++
Sbjct: 103 FDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSL--DSFLRKHDAQF-TVIQLV 150
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 151 GMLRGIASGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 194
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + +PE +Y +DVWS G +L+ M Y + P+
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAI---AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V+ Y KG L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVMEYMSKGCLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 88 LTSTVQLIMQL--MPFGXL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 140
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 141 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 190
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 191 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 131
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 132 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 181
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 182 FTI---KSDVWSFGILL 195
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 86 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 135
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 136 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 182
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 183 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 79 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 128
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 129 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 175
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 176 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 219
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 34/224 (15%)
Query: 34 IGEGGFSTV---SLIEHSQTKKRYALK--KIICHGREDQAQAIREVEHHKTFVHPNILPL 88
+GEG F V H K A+K K C +++ + + E K HP+I+ L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
+ + +++ YP G L + LE K+ + + ++ L+IC+A
Sbjct: 91 IG----------IIEEEPTWIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKA 137
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+ I HRD+ N+L+A+ L D G + E ++ +
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFG--------LSRYIEDEDYYKASVT 186
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLG-CLLYAMCYFKSPF 251
R + + +PE + + +DVW C+ + + K PF
Sbjct: 187 RLPIKWMSPESINFRRFTTA---SDVWMFAVCMWEILSFGKQPF 227
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HRDL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 136
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 137 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 186
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 187 FTI---KSDVWSFGILL 200
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 86 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 135
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 136 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 182
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 183 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ E + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MEPEVVTRYYRAPEVILGMGY---KENVDLWSVGCIMGEMVCHKILF 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 79 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 128
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 129 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 175
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 176 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 219
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 23/229 (10%)
Query: 28 YYIVEKIGEG--GFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH--KTFVHP 83
Y ++ IG+G TV+L + T + +++I ++ + E H K F HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+P + T AD +++ +V + G+ A DL + H+M ++ L +
Sbjct: 87 NIVP---YRATFIAD------NELWVVTSFMAYGS-AKDL----ICTHFMDGMNELAIAY 132
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +K + Y HR +K +++L++ D L L S + + + +
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS---NLSMISHGQRQRVVH 189
Query: 204 DVAAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
D +P+ +PE+ + D ++D++S+G + PF
Sbjct: 190 DFPKYSVKVLPWLSPEVLQ-QNLQGYDAKSDIYSVGITACELANGHVPF 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 78 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 127
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 128 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 174
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 175 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE--DQAQ-AIREVE---HHKT 79
D+Y I IG+G F V + + + ++ + KII + + +QAQ +R +E H T
Sbjct: 54 DRYEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
+ I+ L H + N V +L Y L N R V S+++
Sbjct: 113 EMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNT-NFRGV------SLNLT 159
Query: 140 KMFLK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL--MDLGSVAPAVVKVCGS 196
+ F + +C A+ +F ++ H DLK N+LL N + +D GS G
Sbjct: 160 RKFAQQMCTAL-LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ-----LGQ 213
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
Q +Q S YR+PE+ Y D D+WSLGC+L M
Sbjct: 214 RIYQXIQ-------SRFYRSPEVLLGMPY---DLAIDMWSLGCILVEM 251
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 45/236 (19%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKR---YALKKIICHGREDQAQA-IREVEHHKTFVHPNI 85
I + IG G F V KR A+K + E Q + + E F HPN+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ L + V+ ++ V+++ + G+L D LR + + + ++ M I
Sbjct: 97 IHL---------EGVVTKSTPVMIITEFMENGSL--DSFLRQNDGQF-TVIQLVGMLRGI 144
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
+K D + Y HRDL N+L+ N N V KV ++ L+D
Sbjct: 145 AAGMKYLAD---MNYVHRDLAARNILV-NSN------------LVCKVSDFGLSRFLEDD 188
Query: 206 AAE---------RCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
++ + + + APE Y +DVWS G +++ M Y + P+
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQ---YRKFTSASDVWSYGIVMWEVMSYGERPY 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 84 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 133
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 134 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 180
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 181 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 34/224 (15%)
Query: 34 IGEGGFSTV---SLIEHSQTKKRYALK--KIICHGREDQAQAIREVEHHKTFVHPNILPL 88
+GEG F V H K A+K K C +++ + + E K HP+I+ L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
+ + +++ YP G L + LE K+ + + ++ L+IC+A
Sbjct: 79 IG----------IIEEEPTWIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKA 125
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+ I HRD+ N+L+A+ L D G + E ++ +
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFG--------LSRYIEDEDYYKASVT 174
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLG-CLLYAMCYFKSPF 251
R + + +PE + + +DVW C+ + + K PF
Sbjct: 175 RLPIKWMSPESINFRRFTTA---SDVWMFAVCMWEILSFGKQPF 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N + D G
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFG 202
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G L++ +
Sbjct: 203 -LARDINNIDXXKKTTN------GRLPVKWMAPEALFDRVYT---HQSDVWSFGVLMWEI 252
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 34/224 (15%)
Query: 34 IGEGGFSTV---SLIEHSQTKKRYALK--KIICHGREDQAQAIREVEHHKTFVHPNILPL 88
+GEG F V H K A+K K C +++ + + E K HP+I+ L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
+ + +++ YP G L + LE K+ + + ++ L+IC+A
Sbjct: 75 IG----------IIEEEPTWIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKA 121
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAE 208
+ I HRD+ N+L+A+ L D G + E ++ +
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFG--------LSRYIEDEDYYKASVT 170
Query: 209 RCSMPYRAPELFHVDSYCVVDQRTDVWSLG-CLLYAMCYFKSPF 251
R + + +PE + + +DVW C+ + + K PF
Sbjct: 171 RLPIKWMSPESINFRRFTTA---SDVWMFAVCMWEILSFGKQPF 211
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N + D G
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFG 202
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G L++ +
Sbjct: 203 -LARDINNIDXXKKTTN------GRLPVKWMAPEALFDRVYT---HQSDVWSFGVLMWEI 252
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + + A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IISLLN---VFTPQKTLEEFQDVYLVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMVRHKILF 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 33/226 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 224 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 280 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 328
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HR+L N L+ ++ + D G + A +
Sbjct: 329 EYLEKKN---FIHRNLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 377
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPFDTV 254
+ + APE + + + ++DVW+ G LL+ + Y SP+ +
Sbjct: 378 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPYPGI 420
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE--DQAQ-AIREVE---HHKT 79
D+Y I IG+G F V + + + ++ + KII + + +QAQ +R +E H T
Sbjct: 35 DRYEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
+ I+ L H + N V +L Y L N R V S+++
Sbjct: 94 EMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNT-NFRGV------SLNLT 140
Query: 140 KMFLK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL--MDLGSVAPAVVKVCGS 196
+ F + +C A+ +F ++ H DLK N+LL N + +D GS G
Sbjct: 141 RKFAQQMCTAL-LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ-----LGQ 194
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
Q +Q S YR+PE+ Y D D+WSLGC+L M
Sbjct: 195 RIYQXIQ-------SRFYRSPEVLLGMPY---DLAIDMWSLGCILVEM 232
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ ++V Y G+L D LR+ + + + ++
Sbjct: 107 FDHPNIIRL---------EGVVTRGRLAMIVTEYMENGSL--DTFLRTHDGQF-TIMQLV 154
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M + ++ D + Y HRDL NVL+ D+N V KV +
Sbjct: 155 GMLRGVGAGMRYLSD---LGYVHRDLAARNVLV--DSN-----------LVCKVSDFGLS 198
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + APE ++ +DVWS G +++ + Y + P+
Sbjct: 199 RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSA---SDVWSFGVVMWEVLAYGERPY 255
Query: 252 DTVYER 257
+ R
Sbjct: 256 WNMTNR 261
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 23/229 (10%)
Query: 28 YYIVEKIGEG--GFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH--KTFVHP 83
Y ++ IG+G TV+L + T + +++I ++ + E H K F HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
NI+P + T AD +++ +V + G+ A DL + H+M ++ L +
Sbjct: 71 NIVP---YRATFIAD------NELWVVTSFMAYGS-AKDL----ICTHFMDGMNELAIAY 116
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
+ +K + Y HR +K +++L++ D L L S + + + +
Sbjct: 117 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS---NLSMISHGQRQRVVH 173
Query: 204 DVAAERCS-MPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
D +P+ +PE+ + D ++D++S+G + PF
Sbjct: 174 DFPKYSVKVLPWLSPEVLQ-QNLQGYDAKSDIYSVGITACELANGHVPF 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 67 MKKIRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVS---LIEHSQTKKRYALKKII--CHGREDQAQAIREVEHH 77
+K + V+ +G G F TV + +T K KI+ G + + + E
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ HP+++ LL C P + +Q++ P G L LE K + S
Sbjct: 95 ASMDHPHLVRLLGV----CLSPTIQLVTQLM------PHGCL---LEYVHEHKDNIGSQL 141
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+L ++I + + + + HRDL NVL+ + N+ + D G + ++
Sbjct: 142 LLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFG-----LARLLEGD 193
Query: 198 EAQNLQDVAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
E ++ A+ MP + A E H + ++DVWS G ++ + F P+D +
Sbjct: 194 E----KEYNADGGKMPIKWMALECIHYRKFT---HQSDVWSYGVTIWELMTFGGKPYDGI 246
Query: 255 YER 257
R
Sbjct: 247 PTR 249
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE--DQAQ-AIREVE---HHKT 79
D+Y I IG+G F V + + + ++ + KII + + +QAQ +R +E H T
Sbjct: 54 DRYEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
+ I+ L H + N V +L Y L N R V S+++
Sbjct: 113 EMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNT-NFRGV------SLNLT 159
Query: 140 KMFLK-ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL--MDLGSVAPAVVKVCGS 196
+ F + +C A+ +F ++ H DLK N+LL N + +D GS G
Sbjct: 160 RKFAQQMCTAL-LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQ-----LGQ 213
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
Q +Q S YR+PE+ Y D D+WSLGC+L M
Sbjct: 214 RIYQXIQ-------SRFYRSPEVLLGMPY---DLAIDMWSLGCILVEM 251
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ ++V Y G+L D LR+ + + + ++
Sbjct: 107 FDHPNIIRL---------EGVVTRGRLAMIVTEYMENGSL--DTFLRTHDGQF-TIMQLV 154
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M + ++ D + Y HRDL NVL+ D+N V KV +
Sbjct: 155 GMLRGVGAGMRYLSD---LGYVHRDLAARNVLV--DSN-----------LVCKVSDFGLS 198
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + APE ++ +DVWS G +++ + Y + P+
Sbjct: 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA---SDVWSFGVVMWEVLAYGERPY 255
Query: 252 DTVYER 257
+ R
Sbjct: 256 WNMTNR 261
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 33/226 (14%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQA---IREVEHHKTFVHPNILPLL 89
K+G G + V + K+Y+L + +ED + ++E K HPN++ LL
Sbjct: 266 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAV 149
V ++ + G L + LR + +++V +L M +I A+
Sbjct: 322 G---------VCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAM 370
Query: 150 KVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER 209
+ + HR+L N L+ ++ + D G + A +
Sbjct: 371 EYLEKKN---FIHRNLAARNCLVGENHLVKVADFG--------LSRLMTGDTYTAHAGAK 419
Query: 210 CSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC-YFKSPFDTV 254
+ + APE + + + ++DVW+ G LL+ + Y SP+ +
Sbjct: 420 FPIKWTAPESLAYNKFSI---KSDVWAFGVLLWEIATYGMSPYPGI 462
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 2 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 59
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ GK Y+
Sbjct: 60 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GETGK-YLRLP 107
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 108 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 151
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 152 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 198
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 63 GREDQAQAIR-------EVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYP 115
G+ D A AI+ E + +I+ DH + V+ V++V+ +
Sbjct: 68 GKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFME 127
Query: 116 KGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLAND 175
G L D LR + + + ++ M I ++ D + Y HRDL N+L+ ++
Sbjct: 128 NGAL--DAFLRKHDGQF-TVIQLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSN 181
Query: 176 NNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVW 235
+ D G + +V + + + + + + APE + +DVW
Sbjct: 182 LVCKVSDFG-----LSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA---SDVW 232
Query: 236 SLGCLLY-AMCYFKSPF 251
S G +++ M Y + P+
Sbjct: 233 SYGIVMWEVMSYGERPY 249
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDATLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+ + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMI 219
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I E + D + + HR
Sbjct: 85 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLV---HR 138
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 139 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 188
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 23 VKSDKYYIVEKIGEGGFSTVS---LIEHSQTKKRYALKKIICH--GREDQAQAIREVEHH 77
+K + V+ +G G F TV + +T K KI+ G + + + E
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ HP+++ LL C P + +Q++ P G L LE K + S
Sbjct: 72 ASMDHPHLVRLL----GVCLSPTIQLVTQLM------PHGCL---LEYVHEHKDNIGSQL 118
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+L ++I + + + + + HRDL NVL+ + N+ + D G + ++
Sbjct: 119 LLNWCVQIAKGMMYLEERRLV---HRDLAARNVLVKSPNHVKITDFG-----LARLLEGD 170
Query: 198 EAQNLQDVAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
E ++ A+ MP + A E H + ++DVWS G ++ + F P+D +
Sbjct: 171 E----KEYNADGGKMPIKWMALECIHYRKFT---HQSDVWSYGVTIWELMTFGGKPYDGI 223
Query: 255 YER 257
R
Sbjct: 224 PTR 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 94 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 146
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 147 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 196
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 197 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVCEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 92/234 (39%), Gaps = 29/234 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHH 77
+++ + + + IG GGF V + T K YA+K K ++ + A+ E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER--- 240
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ +++ D C ++ ++ +L G L L V S D
Sbjct: 241 ---IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----FSEAD 293
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ +I ++ H+ + +RDLK AN+LL + + DLG C +
Sbjct: 294 MRFYAAEIILGLEHMHNRFVV---YRDLKPANILLDEHGHVRISDLGL-------ACDFS 343
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + V + Y APE+ D D +SLGC+L+ + SPF
Sbjct: 344 KKKPHASVG----THGYMAPEVLQ--KGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 90 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 142
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 143 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 192
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 193 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 92/234 (39%), Gaps = 29/234 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHH 77
+++ + + + IG GGF V + T K YA+K K ++ + A+ E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER--- 240
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ +++ D C ++ ++ +L G L L V S D
Sbjct: 241 ---IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----FSEAD 293
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ +I ++ H+ + +RDLK AN+LL + + DLG C +
Sbjct: 294 MRFYAAEIILGLEHMHNRFVV---YRDLKPANILLDEHGHVRISDLGL-------ACDFS 343
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + V + Y APE+ D D +SLGC+L+ + SPF
Sbjct: 344 KKKPHASVG----THGYMAPEVLQ--KGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 36/231 (15%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 82 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 128
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + + +
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFG--------LMRALPQNDDH 177
Query: 204 DVAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 178 XVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 89 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 141
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 142 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 191
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 192 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 91 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 143
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 144 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 193
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 194 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 88 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 140
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 141 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 190
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 191 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 87 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 139
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G + K+ G+ E ++ AE +P + L
Sbjct: 140 -HRDLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALE 189
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 190 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 39/180 (21%)
Query: 80 FVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
F HPNI+ L + V+ + V++V Y G+L L+ ++ G+ + + ++
Sbjct: 80 FDHPNIIHL---------EGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQ--FTVIQLV 127
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
M I +K D + Y HRDL N+L+ N N V KV +
Sbjct: 128 GMLRGISAGMKYLSD---MGYVHRDLAARNILI-NSN------------LVCKVSDFGLS 171
Query: 200 QNLQD-------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ L+D + + + APE + +DVWS G +++ + Y + P+
Sbjct: 172 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA---SDVWSYGIVMWEVVSYGERPY 228
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 47/253 (18%)
Query: 34 IGEGGFSTV--SLIEHSQTKKRY--ALKKIICHGREDQ-AQAIREVEHHKTFVHPNILPL 88
IG G F V +++ S KK A+K + E Q + E F H NI+ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 89 LDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEA 148
+ V++ ++++ Y G L D LR + S + ++ M I
Sbjct: 112 ---------EGVISKYKPMMIITEYMENGAL--DKFLREKDGEF-SVLQLVGMLRGIAAG 159
Query: 149 VKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD---- 204
+K + + Y HRDL N+L+ N N V KV ++ L+D
Sbjct: 160 MKYLAN---MNYVHRDLAARNILV-NSN------------LVCKVSDFGLSRVLEDDPEA 203
Query: 205 ---VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVYERGDS 260
+ + + + APE SY +DVWS G +++ M Y + P+ +E +
Sbjct: 204 TYTTSGGKIPIRWTAPEAI---SYRKFTSASDVWSFGIVMWEVMTYGERPY---WELSNH 257
Query: 261 VALAVISGNITFP 273
+ I+ P
Sbjct: 258 EVMKAINDGFRLP 270
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 34/256 (13%)
Query: 7 NLIFQMGCLCSKEAVY--VKSDKYYIVEKIGEGGFSTV----SLIEHSQTKKRYALKKII 60
NL FQ +A+ +K ++ ++ +G G F TV + E + K A+K++
Sbjct: 19 NLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 78
Query: 61 -CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTL 119
+ + + E + +P++ LL LT S V ++ P G L
Sbjct: 79 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----------STVQLITQLMPFGCL 128
Query: 120 ANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL 179
L+ K + S +L ++I + + D + + HRDL NVL+ +
Sbjct: 129 ---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVK 182
Query: 180 LMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGC 239
+ D G + K+ G+ E ++ AE +P + L + + + ++DVWS G
Sbjct: 183 ITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGV 232
Query: 240 LLYAMCYFKS-PFDTV 254
++ + F S P+D +
Sbjct: 233 TVWELMTFGSKPYDGI 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 18 KEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHH 77
K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQVM 58
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 59 KKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLPQ 106
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 107 LVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADFG 150
Query: 198 EAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 151 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 196
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 137 DIL-KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
DIL K+ + I +A++ H ++ HRD+K +NVL+ LG V + G
Sbjct: 136 DILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINA--------LGQVKXCDFGISG 185
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVD----SYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+D+ A C PY APE + + Y V ++D+WSLG + + P+
Sbjct: 186 YLVDDVAKDIDA-GCK-PYXAPERINPELNQKGYSV---KSDIWSLGITXIELAILRFPY 240
Query: 252 DT 253
D+
Sbjct: 241 DS 242
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 29/234 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHH 77
+++ + + + IG GGF V + T K YA+K K ++ + A+ E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER--- 240
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ +++ D C ++ ++ +L G L L V S D
Sbjct: 241 ---IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----FSEAD 293
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ +I ++ H+ + +RDLK AN+LL + + DLG C +
Sbjct: 294 MRFYAAEIILGLEHMHNRFVV---YRDLKPANILLDEHGHVRISDLGL-------ACDFS 343
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + V + Y APE+ + D D +SLGC+L+ + SPF
Sbjct: 344 KKKPHASVG----THGYMAPEV--LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 29/234 (12%)
Query: 21 VYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQAIREVEHH 77
+++ + + + IG GGF V + T K YA+K K ++ + A+ E
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER--- 239
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVD 137
+ +++ D C ++ ++ +L G L L V S D
Sbjct: 240 ---IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV----FSEAD 292
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+ +I ++ H+ + +RDLK AN+LL + + DLG C +
Sbjct: 293 MRFYAAEIILGLEHMHNRFVV---YRDLKPANILLDEHGHVRISDLGL-------ACDFS 342
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
+ + V + Y APE+ + D D +SLGC+L+ + SPF
Sbjct: 343 KKKPHASVG----THGYMAPEV--LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR--------EDQAQAIREVEHH 77
DK + + +GEG F V + E K + + + ED + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 38/232 (16%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 82 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 128
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + A QN
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM---------RALPQNDD 176
Query: 204 D-VAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 177 HYVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 38/232 (16%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 76 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 122
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + A QN
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM---------RALPQNDD 170
Query: 204 D-VAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 36/231 (15%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 72 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 118
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + + +
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFG--------LMRALPQNDDH 167
Query: 204 DVAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 168 XVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 232
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ + GK Y+
Sbjct: 233 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLKGET-GK-YLRLP 280
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + + Y HRDL+ AN+L+ + V KV
Sbjct: 281 QLVDMAAQIASGMAY---VERMNYVHRDLRAANILVGEN-------------LVCKVADF 324
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 371
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 232
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ + GK Y+
Sbjct: 233 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLKGET-GK-YLRLP 280
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + + Y HRDL+ AN+L+ + V KV
Sbjct: 281 QLVDMAAQIASGMAY---VERMNYVHRDLRAANILVGEN-------------LVCKVADF 324
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 371
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 42/264 (15%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVE 75
K+A + + + +K+G G F V + +++ K K + G + E
Sbjct: 172 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEAN 229
Query: 76 HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSS 135
KT H ++ L HA+ + + ++ + KG+L + L+ K +
Sbjct: 230 VMKTLQHDKLVKL--HAVV--------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 279
Query: 136 VDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG 195
++ +I E + Y HRDL+ AN+L++ + D G
Sbjct: 280 --LIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFG----------- 323
Query: 196 SAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPFDTV 254
L V A + + + APE + S+ + ++DVWS G LL + Y + P+ +
Sbjct: 324 ------LARVGA-KFPIKWTAPEAINFGSFTI---KSDVWSFGILLMEIVTYGRIPYPGM 373
Query: 255 YERGDSVALAVISG-NITFPENTP 277
V A+ G + PEN P
Sbjct: 374 --SNPEVIRALERGYRMPRPENCP 395
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 89 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 141
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G K+ G+ E ++ AE +P + L
Sbjct: 142 -HRDLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALE 191
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 192 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 315
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ + GK Y+
Sbjct: 316 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLKGET-GK-YLRLP 363
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 364 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 407
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 408 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 454
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 89 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 141
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G K+ G+ E ++ AE +P + L
Sbjct: 142 -HRDLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALE 191
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 192 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 63
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ GK Y+
Sbjct: 64 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMNKGSLLDFLK-GETGK-YLRLP 111
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 112 QLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 155
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 156 GLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIITLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 28/236 (11%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTV---SLIEHSQTKKRYALK--KIICHGREDQAQAIRE 73
E V + + + + +GEG F +V +L + T + A+K K+ + + + + E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL--ELRSVGKH 131
K F HPN++ LL C + + +++LP+ G L L G
Sbjct: 87 AACMKDFSHPNVIRLLGV----CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVV 191
++ +LK + I ++ + + HRDL N +L +D + D G +
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFG-----LS 194
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYC--VVDQRTDVWSLGCLLYAMC 245
K S + +A MP + ++S V ++DVW+ G ++ +
Sbjct: 195 KKIYSGDYYRQGRIA----KMPVK---WIAIESLADRVYTSKSDVWAFGVTMWEIA 243
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 38/232 (16%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 76 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 122
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + A QN
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM---------RALPQNDD 170
Query: 204 D-VAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 219
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 101 LNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAY 160
L ST Q++M L P G L L+ K + S +L ++I + + D + +
Sbjct: 91 LTSTVQLIMQL--MPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV-- 143
Query: 161 AHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELF 220
HRDL NVL+ + + D G K+ G+ E ++ AE +P + L
Sbjct: 144 -HRDLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALE 193
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + + ++DVWS G ++ + F S P+D +
Sbjct: 194 SI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 63
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ GK Y+
Sbjct: 64 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMNKGSLLDFLK-GETGK-YLRLP 111
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 112 QLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 155
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 156 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 47/243 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAI 71
C ++ + YI ++G+G F +V L + T A+K++ G + Q
Sbjct: 14 CQDPTIFEERHLKYI-SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ 72
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH 131
RE++ K +H + + G L +V+ Y P G L + L+
Sbjct: 73 REIQILKA-LHSDFIVKYRGVSYGPGRQSLR------LVMEYLPSGCLRDFLQ------R 119
Query: 132 YMSSVDILKMFL---KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG--SV 186
+ + +D ++ L +IC+ ++ + + HRDL N+L+ ++ + + D G +
Sbjct: 120 HRARLDASRLLLYSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKL 176
Query: 187 APA-----VVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
P VV+ G + + + APE S + +++DVWS G +L
Sbjct: 177 LPLDKDYYVVREPGQS-------------PIFWYAPESL---SDNIFSRQSDVWSFGVVL 220
Query: 242 YAM 244
Y +
Sbjct: 221 YEL 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 38/232 (16%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 72 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 118
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + A QN
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM---------RALPQNDD 166
Query: 204 D-VAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL-------------ANDNNPLLMDLGS 185
+ + +I V H K I HRDLK N+L+ A + L+ D G
Sbjct: 118 ISLLRQIASGVAHLHSLKII---HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG- 173
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQR----TDVWSLGCLL 241
+ K S ++ ++ + +RAPEL + +R D++S+GC+
Sbjct: 174 ----LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 242 -YAMCYFKSPFDTVYERGDSVALAVIS 267
Y + K PF Y R ++ + S
Sbjct: 230 YYILSKGKHPFGDKYSRESNIIRGIFS 256
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 47/243 (19%)
Query: 16 CSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAI 71
C ++ + YI ++G+G F +V L + T A+K++ G + Q
Sbjct: 1 CQDPTIFEERHLKYI-SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ 59
Query: 72 REVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH 131
RE++ K +H + + G L +V+ Y P G L + L+
Sbjct: 60 REIQILKA-LHSDFIVKYRGVSYGPGRQSLR------LVMEYLPSGCLRDFLQ------R 106
Query: 132 YMSSVDILKMFL---KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG--SV 186
+ + +D ++ L +IC+ ++ + + HRDL N+L+ ++ + + D G +
Sbjct: 107 HRARLDASRLLLYSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKL 163
Query: 187 APA-----VVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
P VV+ G + + + APE S + +++DVWS G +L
Sbjct: 164 LPLDKDYYVVREPGQS-------------PIFWYAPESL---SDNIFSRQSDVWSFGVVL 207
Query: 242 YAM 244
Y +
Sbjct: 208 YEL 210
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 38/232 (16%)
Query: 30 IVEKIGEGGFSTVSLIEHSQTKKRYA------LKKIICHGREDQAQAIREVEHHKTFVHP 83
++EK+G+G F V E + LK + E IREV + H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
N++ L LT P + MV P G+L + LR H++ + + +
Sbjct: 72 NLIRLYGVVLT----PPMK------MVTELAPLGSLLD--RLRKHQGHFLLGT-LSRYAV 118
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
++ E + + + HRDL N+LLA + + D G + A QN
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM---------RALPQNDD 166
Query: 204 D-VAAERCSMPYR--APELFHVDSYCVVDQRTDVWSLGCLLYAM-CYFKSPF 251
V E +P+ APE ++ +D W G L+ M Y + P+
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 115 FFWQVLEAVRHCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 171
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 172 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 215
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 216 -----IIRGQVFF 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 88 TSTVQLITQLMPFGXL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 141
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 142 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 191
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 35/190 (18%)
Query: 69 QAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDL----- 123
Q+ RE+ H N+L + G N ++ ++ ++ KG+L + L
Sbjct: 55 QSEREIFSTPGMKHENLLQFIAAEKRGS-----NLEVELWLITAFHDKGSLTDYLKGNII 109
Query: 124 ---ELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
EL V + + L + C KP + AHRD K+ NVLL +D +L
Sbjct: 110 TWNELCHVAETMSRGLSYLHEDVPWCRG----EGHKP-SIAHRDFKSKNVLLKSDLTAVL 164
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPEL------FHVDSYCVVDQRTDV 234
D G AV G V R Y APE+ F D++ R D+
Sbjct: 165 ADFGL---AVRFEPGKPPGDTHGQVGTRR----YMAPEVLEGAINFQRDAFL----RIDM 213
Query: 235 WSLGCLLYAM 244
+++G +L+ +
Sbjct: 214 YAMGLVLWEL 223
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGCLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL+ AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 115 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 171
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 172 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 215
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 216 -----IIGGQVFF 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N + D G
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFG 202
Query: 185 SVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+A + + + N R + + APE Y ++DVWS G L++ +
Sbjct: 203 -LARDINNIDYYKKTTN------GRLPVKWMAPEALFDRVYT---HQSDVWSFGVLMWEI 252
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 132 YMSSVDILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLG 184
Y + D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-------- 185
Query: 185 SVAPAVVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
VVK+C A+++ R + + APE Y + ++DVWS G
Sbjct: 186 -----VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFG 237
Query: 239 CLLYAM 244
LL+ +
Sbjct: 238 VLLWEI 243
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + +A ++E +
Sbjct: 176 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGNMSPEA-FLQEAQV 233
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 234 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLP 281
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + + Y HRDL+ AN+L+ + V KV
Sbjct: 282 QLVDMAAQIASGMAY---VERMNYVHRDLRAANILVGEN-------------LVCKVADF 325
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 326 GLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 372
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 147 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 203
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 204 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 247
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 248 -----IIGGQVFF 255
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 148 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 204
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 205 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 248
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 249 -----IIGGQVFF 256
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 66
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ +GK Y+
Sbjct: 67 MKKLRHEKLVQLY----------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLP 114
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + Y HRDL AN+L+ + V KV
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGEN-------------LVCKVADF 158
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 205
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 154 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 210
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 211 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 254
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 255 -----IIRGQVFF 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 120 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 177 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 220
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 221 -----IIRGQVFF 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 119 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 175
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 176 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 219
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 220 -----IIRGQVFF 227
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 147 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 203
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 204 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 247
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 248 -----IIGGQVFF 255
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 148 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 204
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 205 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 248
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 249 -----IIGGQVFF 256
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 148 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 204
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 205 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 248
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 249 -----IIGGQVFF 256
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 147 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 203
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 204 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 247
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 248 -----IIGGQVFF 255
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 120 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 177 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 220
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 221 -----IIRGQVFF 228
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 148 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 204
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 205 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 248
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 249 -----IIGGQVFF 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 118 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 174
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 175 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 218
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 219 -----IIRGQVFF 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 119 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 175
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 176 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 219
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 220 -----IIRGQVFF 227
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 120 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 176
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 177 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 220
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 221 -----IIRGQVFF 228
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 162 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 218
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 219 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 262
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 263 -----IIRGQVFF 270
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 95 KMIGKHKNIINLL----GACT-----QDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 194
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 195 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 246
Query: 239 CLLYAM 244
L++ +
Sbjct: 247 VLMWEI 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 162 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 218
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 219 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 262
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 263 -----IIRGQVFF 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 17 SKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEH 76
+K+A + + + K+G+G F V + + T R A+K + G ++E +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQV 232
Query: 77 HKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSV 136
K H ++ L + S + +V Y KG+L + L+ + GK Y+
Sbjct: 233 MKKLRHEKLVQLY----------AVVSEEPIYIVGEYMSKGSLLDFLKGET-GK-YLRLP 280
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
++ M +I + + + Y HRDL+ AN+L+ + V KV
Sbjct: 281 QLVDMAAQIASGMAY---VERMNYVHRDLRAANILVGEN-------------LVCKVADF 324
Query: 197 AEAQNLQD---VAAERCSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
A+ ++D A + P + APE + + ++DVWS G LL
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 371
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 107 VLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLK 166
+ ++ Y G+L + L+ S K ++ +L M +I E + + Y HR+L+
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YIHRNLR 132
Query: 167 TANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMP--YRAPELFHVDS 224
AN+L+++ + + D G + ++ E A E P + APE + +
Sbjct: 133 AANILVSDTLSCKIADFG-----LARLIEDNEY-----TAREGAKFPIKWTAPEAINYGT 182
Query: 225 YCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 183 FTI---KSDVWSFGILL 196
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 115 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 171
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 172 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 215
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 216 -----IIRGQVFF 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 167 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 223
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 224 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 267
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 268 -----IIRGQVFF 275
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 135 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 191
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 192 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 236 -----IIRGQVFF 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 135 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 191
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 192 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 236 -----IIRGQVFF 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 31/244 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR----EDQAQAIREVEHHKTFVH 82
KY + + +GEG + V + S+T R A+K + +A +E++ + H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 83 PNILPLLDHALTGCADPVLNSTSQVL-MVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
N++ L+D + N Q + MV+ Y G L SV +
Sbjct: 66 KNVIQLVDV--------LYNEEKQKMYMVMEYCVCGMQEM---LDSVPEKRFPVCQAHGY 114
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
F ++ + ++ H H+D+K N+LL + LG VA A+ +
Sbjct: 115 FCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG-VAEALHPFAADDTCRT 170
Query: 202 LQDVAAERCSMPYRAPELFH-VDSYCVVDQRTDVWSLGCLLYAMCYFKSPF--DTVYERG 258
Q A ++ PE+ + +D++ + D+WS G LY + PF D +Y+
Sbjct: 171 SQGSPA------FQPPEIANGLDTFSGF--KVDIWSAGVTLYNITTGLYPFEGDNIYKLF 222
Query: 259 DSVA 262
+++
Sbjct: 223 ENIG 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 147 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 203
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 204 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 247
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 248 -----IIRGQVFF 255
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 134 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 190
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 191 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 234
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 235 -----IIRGQVFF 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 135 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 191
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 192 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 236 -----IIRGQVFF 243
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
K+G+G F V + + T R A+K + G ++E + K H ++ L
Sbjct: 14 KLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--- 68
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
+ S + +V Y KG+L + L+ +GK Y+ ++ M +I +
Sbjct: 69 -------AVVSEEPIYIVTEYMSKGSLLDFLK-GEMGK-YLRLPQLVDMAAQIASGMAYV 119
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD---VAAER 209
+ Y HRDL+ AN+L+ + V KV A+ ++D A +
Sbjct: 120 ER---MNYVHRDLRAANILVGEN-------------LVCKVADFGLARLIEDNEYTARQG 163
Query: 210 CSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
P + APE + + ++DVWS G LL
Sbjct: 164 AKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 194
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 31 VEKIGEGGFSTVSLIEHS----QTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNIL 86
+ ++G+G F +V L + T A+K++ G + Q RE++ K +H + +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA-LHSDFI 74
Query: 87 PLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL--- 143
G L +V+ Y P G L + L+ + + +D ++ L
Sbjct: 75 VKYRGVSYGPGRQSLR------LVMEYLPSGCLRDFLQ------RHRARLDASRLLLYSS 122
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG--SVAPA-----VVKVCGS 196
+IC+ ++ + + HRDL N+L+ ++ + + D G + P VV+ G
Sbjct: 123 QICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ + + APE S + +++DVWS G +LY +
Sbjct: 180 S-------------PIFWYAPESL---SDNIFSRQSDVWSFGVVLYEL 211
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 134 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 190
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 191 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 234
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 235 -----IIRGQVFF 242
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 95 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 148
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 149 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 198
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 94 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 147
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 148 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 197
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 90 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 143
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 144 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 193
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGRE--DQAQAIREVEHHKTFVHP 83
D+Y I IG G + V K+ A+KKI+ + D + +RE+ H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL 143
+++ +LD + + ++ +VL +D + Y++ + I +
Sbjct: 113 HVVKVLDIVIPKDVEKF----DELYVVL-----EIADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAE----- 198
+ VK H A HRDLK AN L+ D + + D G G+++
Sbjct: 164 NLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 199 ------------AQNL-QDVAAERCSMPYRAPELFHV-DSYCVVDQRTDVWSLGCLL 241
+NL + + + YRAPEL + ++Y + DVWS+GC+
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT---EAIDVWSIGCIF 274
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 141 MFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKVCGSAEA 199
F ++ EAV+ H+ HRD+K N+L+ + L L+D GS A V +
Sbjct: 162 FFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 218
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGD 259
+ Y PE Y + VWSLG LLY M PF+ E
Sbjct: 219 TRV-----------YSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEE--- 262
Query: 260 SVALAVISGNITF 272
+I G + F
Sbjct: 263 -----IIRGQVFF 270
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 86 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 135
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 136 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYV 187
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
V + YRAPE+ Y + D+WS+GC++ M
Sbjct: 188 V-----TRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 91 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 144
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 145 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 194
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 38/214 (17%)
Query: 33 KIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLDHA 92
K+G+G F V + + T R A+K + G ++E + K H ++ L
Sbjct: 15 KLGQGCFGEVWMGTWNGTT-RVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--- 69
Query: 93 LTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVF 152
+ S + +V Y KG+L + L+ GK Y+ ++ M +I +
Sbjct: 70 -------AVVSEEPIXIVTEYMSKGSLLDFLK-GETGK-YLRLPQLVDMAAQIASGMAYV 120
Query: 153 HDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD---VAAER 209
+ Y HRDL+ AN+L+ + V KV A+ ++D A +
Sbjct: 121 ER---MNYVHRDLRAANILVGEN-------------LVCKVADFGLARLIEDNEXTARQG 164
Query: 210 CSMP--YRAPELFHVDSYCVVDQRTDVWSLGCLL 241
P + APE + + ++DVWS G LL
Sbjct: 165 AKFPIKWTAPEAALYGRFTI---KSDVWSFGILL 195
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 91 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 144
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 145 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 194
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 95 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 148
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 149 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 198
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 91 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 144
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 145 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 194
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 125 LRSVGKHYMSSVDILKMFLKICEAVKV-FHDAKPIAY------AHRDLKTANVLLANDNN 177
LRS ++ D+ K FL + + F AK + + HRDL N+LL+ N
Sbjct: 123 LRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV 182
Query: 178 PLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSL 237
+ D G +A + K + R + + APE Y + ++DVWS
Sbjct: 183 VKIXDFG-LARDIYKDPDYVRKGD------ARLPLKWMAPETIFDRVYTI---QSDVWSF 232
Query: 238 GCLLYAM 244
G LL+ +
Sbjct: 233 GVLLWEI 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 88 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 141
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 142 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 191
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYV 186
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
V + YRAPE+ Y + D+WS+GC++ M
Sbjct: 187 V-----TRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 98 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 151
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 152 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 201
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 88 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 141
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 142 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 191
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 88 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 141
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 142 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 191
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 26/147 (17%)
Query: 139 LKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL-------------ANDNNPLLMDLGS 185
+ + +I V H K I HRDLK N+L+ A + L+ D G
Sbjct: 118 ISLLRQIASGVAHLHSLKII---HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG- 173
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQR----TDVWSLGCLL 241
+ K S + ++ + +RAPEL + +R D++S+GC+
Sbjct: 174 ----LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 242 -YAMCYFKSPFDTVYERGDSVALAVIS 267
Y + K PF Y R ++ + S
Sbjct: 230 YYILSKGKHPFGDKYSRESNIIRGIFS 256
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 28/221 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLVGIKHLHSAGII---HRDLKPSNIVVKSDATLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+ + YRAPE+ Y + D+WS+G ++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGVIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ + YRAPE+ Y + D+WS+GC++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 218
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 90 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 143
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G K+ G+ E ++ AE +P + L +
Sbjct: 144 DLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALESI- 193
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 95 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 148
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G K+ G+ E ++ AE +P + L +
Sbjct: 149 DLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALESI- 198
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 82 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 135
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 136 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 185
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 471 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 521
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 522 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 577
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 578 -KGSEVTAMLEKG 589
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 25/121 (20%)
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
K +++ ++ ++ + ++ K I HRDL N+LL+ N
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKN------------- 185
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 242
Query: 244 M 244
+
Sbjct: 243 I 243
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 90 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 139
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 140 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYV 191
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
V YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 192 VTRY-----YRAPEVILGMGY---KENVDLWSVGCIMGEMVCHKILF 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 88 LLDHA--LTGCADPVLNS------TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDIL 139
+LD A + G P ++ TS V +V P G L + + + + S D+L
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVR---ENRGRLGSQDLL 122
Query: 140 KMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEA 199
++I + + D + + HRDL NVL+ + N+ + D G + ++ E
Sbjct: 123 NWCMQIAKGMSYLEDVRLV---HRDLAARNVLVKSPNHVKITDFG-----LARLLDIDET 174
Query: 200 QNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTVYER 257
+ D + + + A E + ++DVWS G ++ + F + P+D + R
Sbjct: 175 EYHAD--GGKVPIKWMALESILRRRFT---HQSDVWSYGVTVWELMTFGAKPYDGIPAR 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 28/221 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 85 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLSQVIQMELDHERMSYLLYQ 134
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 135 MLVGIKHLHSAGII---HRDLKPSNIVVKSDATLKILDFG-----LARTAGTSFM----- 181
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
+ + YRAPE+ Y + D+WS+G ++ M
Sbjct: 182 MTPYVVTRYYRAPEVILGMGY---KENVDIWSVGVIMGEMI 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 88 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 141
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G K+ G+ E ++ AE +P + L +
Sbjct: 142 DLAARNVLVKTPQHVKITDFGR-----AKLLGAEE----KEYHAEGGKVPIKWMALESI- 191
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII--CHGREDQAQAIREVEHHKTFVHPN 84
+Y ++ IG G V + ++ A+KK+ + +A RE+ K H N
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK 144
I+ LL+ L V +V+ D L V + + + + +
Sbjct: 79 IIGLLN---VFTPQKSLEEFQDVYIVMELM-------DANLCQVIQMELDHERMSYLLYQ 128
Query: 145 ICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD 204
+ +K H A I HRDLK +N+++ +D ++D G + + G++
Sbjct: 129 MLCGIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMMTPYV 180
Query: 205 VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
V + YRAPE+ Y + D+WS+GC++ M K F
Sbjct: 181 V-----TRYYRAPEVILGMGY---KENVDLWSVGCIMGEMVCHKILF 219
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 470 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 520
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 521 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 576
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 577 -KGSEVTAMLEKG 588
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 104 TSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
TS V ++ P G L L+ K + S +L ++I + + D + + HR
Sbjct: 122 TSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HR 175
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL NVL+ + + D G + K+ G+ E ++ AE +P + L +
Sbjct: 176 DLAARNVLVKTPQHVKITDFG-----LAKLLGAEE----KEYHAEGGKVPIKWMALESI- 225
Query: 224 SYCVVDQRTDVWSLGCLLYAMCYFKS-PFDTV 254
+ + ++DVWS G ++ + F S P+D +
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+K H A I HRDLK +N+++ +D ++D G + + G++ +
Sbjct: 140 GIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFM-----MVP 186
Query: 208 ERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+ YRAPE+ Y + D+WS+GC++ M
Sbjct: 187 FVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEM 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 82 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENN-------- 181
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 182 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 233
Query: 239 CLLYAM 244
L++ +
Sbjct: 234 VLMWEI 239
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 112 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 162
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 218
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 219 -KGSEVTAMLEKG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 30/213 (14%)
Query: 33 KIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K GEGGF V + ++ + + E + Q +E++ H N++ LL
Sbjct: 29 KXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ G + +V Y P G+L + L G +S K+ +
Sbjct: 89 FSSDG---------DDLCLVYVYXPNGSLLDRLSCLD-GTPPLSWHXRCKIAQGAANGIN 138
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ I HRD+K+AN+LL + D G A + Q V R
Sbjct: 139 FLHENHHI---HRDIKSANILLDEAFTAKISDFG---------LARASEKFAQXVXXSRI 186
Query: 211 --SMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ Y APE + + ++D++S G +L
Sbjct: 187 VGTTAYXAPEALRGE----ITPKSDIYSFGVVL 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 87 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 186
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 187 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 238
Query: 239 CLLYAM 244
L++ +
Sbjct: 239 VLMWEI 244
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 162 HRDLAARNILLSEKN-------------VVKICDFGLARDIXKDPDXVRKGDARLPLKWM 208
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 209 APETIFDRVYTI---QSDVWSFGVLLWEI 234
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 84 KMIGKHKNIINLL----GACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 183
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 184 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 235
Query: 239 CLLYAM 244
L++ +
Sbjct: 236 VLMWEI 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 137 DILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLGSVAPA 189
D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------- 176
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 177 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 233
Query: 244 M 244
+
Sbjct: 234 I 234
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEH---SQTKKRYALKKIICHGREDQAQA-----IREVEHH 77
DK + + +GEG F V + E + K + A+ + ++D + + E+E
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 78 KTF-VHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS--------- 127
K H NI+ LL C + +++ Y KG L L R
Sbjct: 141 KMIGKHKNIINLLG----ACT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 128 ---VGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
V + M+ D++ ++ ++ K I HRDL NVL+ +N
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENN-------- 240
Query: 185 SVAPAVVKVCGSAEAQNLQDV------AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG 238
V+K+ A+++ ++ R + + APE Y ++DVWS G
Sbjct: 241 -----VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---HQSDVWSFG 292
Query: 239 CLLYAM 244
L++ +
Sbjct: 293 VLMWEI 298
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 171 HRDLAARNILLSEKN-------------VVKICDFGLARDIXKDPDXVRKGDARLPLKWM 217
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 218 APETIFDRVYTI---QSDVWSFGVLLWEI 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 137 DILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLGSVAPA 189
D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------- 222
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 279
Query: 244 M 244
+
Sbjct: 280 I 280
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 137 DILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLGSVAPA 189
D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 182 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------- 228
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 229 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 285
Query: 244 M 244
+
Sbjct: 286 I 286
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 126 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 176
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 177 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 232
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 233 -KGSEVTAMLEKG 244
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 112 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 162
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 218
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 219 -KGSEVTAMLEKG 230
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 28/218 (12%)
Query: 33 KIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K+G G + V + + + K YALK+I G A RE+ + HPN++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQI--EGTGISMSACREIALLRELKHPNVISL-- 83
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLK-----I 145
L+ + + +L Y + L + ++ K V + + +K I
Sbjct: 84 ------QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCG--SAEAQNLQ 203
+ + H + HRDLK AN+L+ + + G V A + ++ + L
Sbjct: 138 LDGIHYLHANWVL---HRDLKPANILVMGEGP----ERGRVKIADMGFARLFNSPLKPLA 190
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
D+ + YRAPEL + + D+W++GC+
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYT--KAIDIWAIGCIF 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 118 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 168
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 224
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 225 -KGSEVTAMLEKG 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 108 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 158
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 214
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 215 -KGSEVTAMLEKG 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 216 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWM 262
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 263 APETIFDRVYTI---QSDVWSFGVLLWEI 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 137 DILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLGSVAPA 189
D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------- 176
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 233
Query: 244 M 244
+
Sbjct: 234 I 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 106 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 156
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 212
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 213 -KGSEVTAMLEKG 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 223 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWM 269
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 270 APETIFDRVYTI---QSDVWSFGVLLWEI 295
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 221 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWM 267
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 268 APETIFDRVYTI---QSDVWSFGVLLWEI 293
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+K H A I HRDLK +N+++ +D ++D G A +
Sbjct: 136 GIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYV-------- 184
Query: 208 ERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ YRAPE+ Y + D+WS+GC++
Sbjct: 185 --VTRYYRAPEVILGMGY---KENVDIWSVGCIM 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 137 DILKMFLK----ICEAVKVFHDAKPIAYA---HRDLKTANVLLANDNNPLLMDLGSVAPA 189
D+ K FL IC + +V + +A HRDL N+LL+ N
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------- 176
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y + ++DVWS G LL+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI---QSDVWSFGVLLWE 233
Query: 244 M 244
+
Sbjct: 234 I 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 34/174 (19%)
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS----------VGKH 131
H NI+ LL G VL++ Y G L N L +S +
Sbjct: 109 HENIVNLLGACTHG---------GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVV 191
+S+ D+L ++ + + I HRD+ NVLL N + + D G +A ++
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFG-LARDIM 215
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
N R + + APE +F CV ++DVWS G LL+ +
Sbjct: 216 NDSNYIVKGN------ARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEI 259
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 128 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 178
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 234
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 235 -KGSEVTAMLEKG 246
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+I+++ ++ +K ++ + HRDL NVLL + + D G ++ A+
Sbjct: 128 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFG-LSKAL-----R 178
Query: 197 AEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPFDTVY 255
A+ + + + + APE +Y ++DVWS G L++ A Y + P+ +
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM- 234
Query: 256 ERGDSVALAVISG 268
+G V + G
Sbjct: 235 -KGSEVTAMLEKG 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 171 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWM 217
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 218 APETIFDRVYTI---QSDVWSFGVLLWEI 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 173 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWM 219
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 220 APETIFDRVYTI---QSDVWSFGVLLWEI 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL+ N VVK+C A+++ R + +
Sbjct: 171 HRDLAARNILLSEKN-------------VVKICDFGLARDIYKDPDXVRKGDARLPLKWM 217
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 218 APETIFDRVYTI---QSDVWSFGVLLWEI 243
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 30/213 (14%)
Query: 33 KIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K+GEGGF V + ++ + + E + Q +E++ H N++ LL
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ G + +V Y P G+L + L G +S K+ +
Sbjct: 92 FSSDG---------DDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGIN 141
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ I HRD+K+AN+LL + D G A + Q V R
Sbjct: 142 FLHENHHI---HRDIKSANILLDEAFTAKISDFG---------LARASEKFAQXVMXXRI 189
Query: 211 --SMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ Y APE + + ++D++S G +L
Sbjct: 190 VGTTAYMAPEALRGE----ITPKSDIYSFGVVL 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 130 KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPA 189
K ++ D++ ++ ++ K I HRDL N+LL+ +N
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENN------------- 236
Query: 190 VVKVCGSAEAQNLQD------VAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYA 243
VVK+C A+++ R + + APE Y ++DVWS G LL+
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST---KSDVWSYGVLLWE 293
Query: 244 M 244
+
Sbjct: 294 I 294
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 30/213 (14%)
Query: 33 KIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K+GEGGF V + ++ + + E + Q +E++ H N++ LL
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ G + +V Y P G+L + L G +S K+ +
Sbjct: 98 FSSDG---------DDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGIN 147
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ I HRD+K+AN+LL + D G A + Q V R
Sbjct: 148 FLHENHHI---HRDIKSANILLDEAFTAKISDFG---------LARASEKFAQTVMXSRI 195
Query: 211 --SMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ Y APE + + ++D++S G +L
Sbjct: 196 VGTTAYMAPEALRGE----ITPKSDIYSFGVVL 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP+++ L+ G D ++++++ Y G L L + MS +
Sbjct: 94 HPHLVSLI-----GFCD----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMS----WEQ 140
Query: 142 FLKIC-EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
L+IC A + H A HRD+K+ N+LL + P + D G + K +
Sbjct: 141 RLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG-----ISKKGTELDQT 195
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
+L V + ++ Y PE F + +++DV+S G +L+ +
Sbjct: 196 HLXXVV--KGTLGYIDPEYFIKGR---LTEKSDVYSFGVVLFEV 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 30/213 (14%)
Query: 33 KIGEGGFSTV--SLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFVHPNILPLLD 90
K+GEGGF V + ++ + + E + Q +E++ H N++ LL
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 91 HALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKICEAVK 150
+ G + +V Y P G+L + L G +S K+ +
Sbjct: 98 FSSDG---------DDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGIN 147
Query: 151 VFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC 210
H+ I HRD+K+AN+LL + D G A + Q V R
Sbjct: 148 FLHENHHI---HRDIKSANILLDEAFTAKISDFG---------LARASEKFAQTVMXXRI 195
Query: 211 --SMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ Y APE + + ++D++S G +L
Sbjct: 196 VGTTAYMAPEALRGE----ITPKSDIYSFGVVL 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 27/227 (11%)
Query: 30 IVEKIGEGGFSTV---SLIEHSQTKKRYALKKIICHGREDQAQA-IREVEHHKTFVHPNI 85
I E IG G F V L + + A+K + E Q + + E F HPNI
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ L + V+ ++ V+++ + G L + L L + + ++ M I
Sbjct: 80 IRL---------EGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGI 127
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
++ + ++Y HRDL N+L+ N+ L+ + + S++ +
Sbjct: 128 ASGMRYLAE---MSYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ + + APE + +D WS G +++ M + + P+
Sbjct: 182 GG-KIPIRWTAPEAIAFRKFTSA---SDAWSYGIVMWEVMSFGERPY 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 148 AVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAA 207
+K H A I HRDLK +N+++ +D ++D G A +
Sbjct: 138 GIKHLHSAGII---HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYV-------- 186
Query: 208 ERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLL 241
+ YRAPE+ Y D+WS+GC++
Sbjct: 187 --VTRYYRAPEVILGMGYAA---NVDIWSVGCIM 215
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 91/242 (37%), Gaps = 30/242 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR--EDQAQAIREVEHHKTFVHPN 84
+Y +++ IG+G F V + + ALK + R A+ IR +EH + N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL- 143
+ ++ H L N +L N EL K S+ +++ F
Sbjct: 158 TMNVI-HMLENFT--FRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I + + H + I H DLK N+LL G V+ S Q
Sbjct: 208 SILQCLDALHKNRII---HCDLKPENILLKQQ--------GRSGIKVIDFGSSCYEH--Q 254
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
V S YRAPE+ Y + D+WSLGC+L A P + GD +A
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMP---IDMWSLGCIL-AELLTGYPLLPGEDEGDQLAC 310
Query: 264 AV 265
+
Sbjct: 311 MI 312
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 35/277 (12%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKII-----C 61
NL FQ S ++ ++ + IGEG F V + + + AL I C
Sbjct: 19 NLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIY-MSPENPALAVAIKTCKNC 77
Query: 62 HGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAN 121
+ + ++E + F HP+I+ L+ V+ P + L
Sbjct: 78 TSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELCT 121
Query: 122 DLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLM 181
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 122 LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 181
Query: 182 DLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-CL 240
D G + E + + + + APE + + +DVW G C+
Sbjct: 182 DFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCM 230
Query: 241 LYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + PF V + D + + P N P
Sbjct: 231 WEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 266
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 45/239 (18%)
Query: 26 DKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKI--ICHGREDQAQAIREVEHHKTFVHP 83
D Y I IG G + V L T+K A+KK+ + D + +RE+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 84 NILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH--YMSSVDILKM 141
I+ L D + D +L ++ +VL D +L+ + K +++ I +
Sbjct: 86 YIIRLYDLII---PDDLL-KFDELYIVLE-------IADSDLKKLFKTPIFLTEEHIKTI 134
Query: 142 FLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQN 201
+ H++ HRDLK AN LL D + + D G + + S + N
Sbjct: 135 LYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG-----LARTINSEKDTN 186
Query: 202 L------------------QDVAAERCSMPYRAPELFHV-DSYCVVDQRTDVWSLGCLL 241
+ + + + + YRAPEL + ++Y + D+WS GC+
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYT---KSIDIWSTGCIF 242
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 91/242 (37%), Gaps = 30/242 (12%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR--EDQAQAIREVEHHKTFVHPN 84
+Y +++ IG+G F V + + ALK + R A+ IR +EH + N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL- 143
+ ++ H L N +L N EL K S+ +++ F
Sbjct: 158 TMNVI-HMLENFT--FRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQ 203
I + + H + I H DLK N+LL G V+ S Q
Sbjct: 208 SILQCLDALHKNRII---HCDLKPENILLKQQ--------GRSGIKVIDFGSSCYEH--Q 254
Query: 204 DVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
V S YRAPE+ Y + D+WSLGC+L A P + GD +A
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMP---IDMWSLGCIL-AELLTGYPLLPGEDEGDQLAC 310
Query: 264 AV 265
+
Sbjct: 311 MI 312
>pdb|2WM9|A Chain A, Structure Of The Complex Between Dock9 And Cdc42.
pdb|2WMN|A Chain A, Structure Of The Complex Between Dock9 And Cdc42-Gdp.
pdb|2WMO|A Chain A, Structure Of The Complex Between Dock9 And Cdc42
Length = 428
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 134 SSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKV 193
+ VD++K+ LK+ +V V +A P+AYA L N DN L L V V+
Sbjct: 328 AEVDMIKLQLKLQGSVSVQVNAGPLAYARAFLDDTNTKRYPDNKVKL--LKEVFRQFVEA 385
Query: 194 CGSAEAQN 201
CG A A N
Sbjct: 386 CGQALAVN 393
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 160 YAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPEL 219
Y HRDL++AN+L+ N + D G + ++ E Q + + + APE
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFG-----LARLIEDNEXTARQ---GAKFPIKWTAPEA 177
Query: 220 FHVDSYCVVDQRTDVWSLGCLL 241
+ + ++DVWS G LL
Sbjct: 178 ALYGRFTI---KSDVWSFGILL 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 34/174 (19%)
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRS----------VGKH 131
H NI+ LL G VL++ Y G L N L +S +
Sbjct: 109 HENIVNLLGACTHG---------GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVV 191
S+ D+L ++ + + I HRD+ NVLL N + + D G +A ++
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFG-LARDIM 215
Query: 192 KVCGSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
N R + + APE +F CV ++DVWS G LL+ +
Sbjct: 216 NDSNYIVKGN------ARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEI 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 18/121 (14%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 128 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTPFP 279
Y V ++D+WS+G L M + P + DS I + + N P P
Sbjct: 175 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPP 231
Query: 280 Q 280
+
Sbjct: 232 K 232
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 27/227 (11%)
Query: 30 IVEKIGEGGFSTV---SLIEHSQTKKRYALKKIICHGREDQAQA-IREVEHHKTFVHPNI 85
I E IG G F V L + + A+K + E Q + + E F HPNI
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 86 LPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFLKI 145
+ L + V+ ++ V+++ + G L + L L + + ++ M I
Sbjct: 78 IRL---------EGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGI 125
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
++ + ++Y HRDL N+L+ N+ L+ + + S++ +
Sbjct: 126 ASGMRYLAE---MSYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 206 AAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY-AMCYFKSPF 251
+ + + APE + +D WS G +++ M + + P+
Sbjct: 180 GG-KIPIRWTAPEAIAFRKFTSA---SDAWSYGIVMWEVMSFGERPY 222
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 93/244 (38%), Gaps = 34/244 (13%)
Query: 27 KYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGR--EDQAQAIREVEHHKTFVHPN 84
+Y +++ IG+G F V + + ALK + R A+ IR +EH + N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 85 ILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKMFL- 143
+ ++ H L N +L N EL K S+ +++ F
Sbjct: 158 TMNVI-HMLENFT--FRNHICMTFELLS-------MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 144 KICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL--MDLGSVAPAVVKVCGSAEAQN 201
I + + H + I H DLK N+LL + +D GS E Q
Sbjct: 208 SILQCLDALHKNRII---HCDLKPENILLKQQGRSGIKVIDFGSSC---------YEHQR 255
Query: 202 LQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTVYERGDSV 261
+ R YRAPE+ Y + D+WSLGC+L A P + GD +
Sbjct: 256 VYXXIQSRF---YRAPEVILGARYGMP---IDMWSLGCIL-AELLTGYPLLPGEDEGDQL 308
Query: 262 ALAV 265
A +
Sbjct: 309 ACMI 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERC-SMPYRAPELF 220
HRD+K +N+L+ + L D G Q + ++A E + Y +PE
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFG------------VSGQLIDEMANEFVGTRSYMSPERL 178
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAMCYFKSP 250
Y V ++D+WS+G L M + P
Sbjct: 179 QGTHYSV---QSDIWSMGLSLVEMAVGRYP 205
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 82 HPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMSSVDILKM 141
HP+++ L+ G D ++++++ Y G L L + MS +
Sbjct: 94 HPHLVSLI-----GFCD----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMS----WEQ 140
Query: 142 FLKIC-EAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQ 200
L+IC A + H A HRD+K+ N+LL + P + D G + K
Sbjct: 141 RLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG-----ISKKGTELGQT 195
Query: 201 NLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLY 242
+L V + ++ Y PE F + +++DV+S G +L+
Sbjct: 196 HLXXVV--KGTLGYIDPEYFIKGR---LTEKSDVYSFGVVLF 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 133 MSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVK 192
+SS D+L ++ + + I HRD+ NVLL N + + D G +A ++
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFG-LARDIMN 218
Query: 193 VCGSAEAQNLQDVAAERCSMPYRAPE-LFHVDSYCVVDQRTDVWSLGCLLYAM 244
N R + + APE +F CV ++DVWS G LL+ +
Sbjct: 219 DSNYIVKGN------ARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEI 261
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 30/197 (15%)
Query: 78 KTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHY-MSSV 136
+ F HPN+LP+L C P + + +PY G+L N L G ++ +
Sbjct: 62 RIFSHPNVLPVLG----ACQSPPAPHPTLITHWMPY---GSLYNVLH---EGTNFVVDQS 111
Query: 137 DILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGS 196
+K L + + H +P+ H L + +V++ D ++ A VK
Sbjct: 112 QAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMT------ARISMADVKFSFQ 164
Query: 197 AEAQNLQDVAAERCSMP-YRAPELFHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV- 254
+ R P + APE + D+WS LL+ + + PF +
Sbjct: 165 SPG---------RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215
Query: 255 -YERGDSVALAVISGNI 270
E G VAL + I
Sbjct: 216 NMEIGMKVALEGLRPTI 232
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 13/173 (7%)
Query: 19 EAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYA-----LKKIICHGREDQAQAIRE 73
E V + ++ + +G+G F +V + Q + + K D + +RE
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 74 VEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKH-- 131
K F HP++ L+ +L A L +++LP+ G L L +G++
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIP---MVILPFMKHGDLHAFLLASRIGENPF 132
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLG 184
+ +++ + I ++ + HRDL N +LA D + D G
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFG 182
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRD+K +N+L+ + L D G + + S + Y +PE
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG-----------TRSYMSPERLQ 195
Query: 222 VDSYCVVDQRTDVWSLGCLLYAMCYFKSPFDT 253
Y V ++D+WS+G L M + P +
Sbjct: 196 GTHYSV---QSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 117 GTLANDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDN 176
GT A L+ R G + + KM + I +A+ + + HRD+K +N+LL
Sbjct: 107 GTCAEKLKKRMQGP--IPERILGKMTVAIVKALYYLKEKHGVI--HRDVKPSNILLDERG 162
Query: 177 NPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWS 236
L D G V A +A ER P + D R DVWS
Sbjct: 163 QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY--------DIRADVWS 214
Query: 237 LGCLLYAMCYFKSPF 251
LG L + + P+
Sbjct: 215 LGISLVELATGQFPY 229
>pdb|3G0S|A Chain A, Dihydrodipicolinate Synthase From Salmonella Typhimurium
Lt2
pdb|3G0S|B Chain B, Dihydrodipicolinate Synthase From Salmonella Typhimurium
Lt2
Length = 316
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + + + D ++ + GG +S+ + ++ + K+
Sbjct: 188 TGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAAREMADMCKLAAE 247
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G+ +A+AI + H+K FV PN +P+
Sbjct: 248 GQFAEARAINQRLMPLHNKLFVEPNPIPV 276
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 35/133 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL + + K+C A+++++ R + +
Sbjct: 168 HRDLAARNILLTHGR-------------ITKICDFGLARDIKNDSNYVVKGNARLPVKWM 214
Query: 216 APE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS------PFDTVYERGDSVALAVISG 268
APE +F+ CV +DVWS G L+ + S P D+ + + ++S
Sbjct: 215 APESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS- 269
Query: 269 NITFPENTPFPQY 281
PE+ P Y
Sbjct: 270 ----PEHAPAEMY 278
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 35/133 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL + + K+C A+++++ R + +
Sbjct: 186 HRDLAARNILLTHGR-------------ITKICDFGLARDIKNDSNYVVKGNARLPVKWM 232
Query: 216 APE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS------PFDTVYERGDSVALAVISG 268
APE +F+ CV +DVWS G L+ + S P D+ + + ++S
Sbjct: 233 APESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS- 287
Query: 269 NITFPENTPFPQY 281
PE+ P Y
Sbjct: 288 ----PEHAPAEMY 296
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 35/133 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL + + K+C A+++++ R + +
Sbjct: 191 HRDLAARNILLTHGR-------------ITKICDFGLARDIKNDSNYVVKGNARLPVKWM 237
Query: 216 APE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS------PFDTVYERGDSVALAVISG 268
APE +F+ CV +DVWS G L+ + S P D+ + + ++S
Sbjct: 238 APESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS- 292
Query: 269 NITFPENTPFPQY 281
PE+ P Y
Sbjct: 293 ----PEHAPAEMY 301
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 35/133 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL + + K+C A+++++ R + +
Sbjct: 184 HRDLAARNILLTHGR-------------ITKICDFGLARDIKNDSNYVVKGNARLPVKWM 230
Query: 216 APE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS------PFDTVYERGDSVALAVISG 268
APE +F+ CV +DVWS G L+ + S P D+ + + ++S
Sbjct: 231 APESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS- 285
Query: 269 NITFPENTPFPQY 281
PE+ P Y
Sbjct: 286 ----PEHAPAEMY 294
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 190 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 236
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 237 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 155 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 201
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 202 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 230
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ + + + V +++ G L
Sbjct: 49 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------VITENPVWIIMELCTLGELR 98
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
+ L++R S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 99 SFLQVRKF------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 153 GDFG--------LSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 201
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 202 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 35/133 (26%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL N+LL + + K+C A+++++ R + +
Sbjct: 191 HRDLAARNILLTHGR-------------ITKICDFGLARHIKNDSNYVVKGNARLPVKWM 237
Query: 216 APE-LFHVDSYCVVDQRTDVWSLGCLLYAMCYFKS------PFDTVYERGDSVALAVISG 268
APE +F+ CV +DVWS G L+ + S P D+ + + ++S
Sbjct: 238 APESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS- 292
Query: 269 NITFPENTPFPQY 281
PE+ P Y
Sbjct: 293 ----PEHAPAEMY 301
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 128 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 175 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 203
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 90/240 (37%), Gaps = 45/240 (18%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVE--- 75
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 76 --HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA--NDLELRSVGKH 131
+ +IL LLDH + V V+MV + LA E R +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGV-----HVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP------LLMDLGS 185
Y+ + ++ + H + H D+K NVL+ ++P + DLG+
Sbjct: 132 YVKQIS-----KQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
S + + YR+PE+ + D+WS CL++ +
Sbjct: 185 ACWYDEHYTNSIQTRE------------YRSPEVLLGAPWGC---GADIWSTACLIFELI 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 128 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 175 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y APE
Sbjct: 138 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMAPER 184
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L + + P
Sbjct: 185 LQGTHYSV---QSDIWSMGLSLVELAVGRYPI 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 128 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 175 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER--CSMPYRAPEL 219
HRD+K +N+L+ + +K+C + L D A + Y +PE
Sbjct: 128 HRDVKPSNILVNSRGE-------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 220 FHVDSYCVVDQRTDVWSLGCLLYAMCYFKSPF 251
Y V ++D+WS+G L M + P
Sbjct: 175 LQGTHYSV---QSDIWSMGLSLVEMAVGRYPI 203
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 90/240 (37%), Gaps = 45/240 (18%)
Query: 24 KSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIICHGREDQAQAIREVE--- 75
K +Y +V K+G G FSTV L + A+K K+ ED+ + ++ V
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 76 --HHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA--NDLELRSVGKH 131
+ +IL LLDH + V V+MV + LA E R +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGV-----HVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 132 YMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNP------LLMDLGS 185
Y+ + ++ + H + H D+K NVL+ ++P + DLG+
Sbjct: 132 YVKQIS-----KQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 186 VAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAMC 245
S + + YR+PE+ + D+WS CL++ +
Sbjct: 185 ACWYDEHYTNSIQTRE------------YRSPEVLLGAPWGC---GADIWSTACLIFELI 229
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPE-LF 220
HRD+ NVLL N + + D G +A ++ N R + + APE +F
Sbjct: 183 HRDVAARNVLLTNGHVAKIGDFG-LARDIMNDSNYIVKGN------ARLPVKWMAPESIF 235
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAM 244
CV ++DVWS G LL+ +
Sbjct: 236 D----CVYTVQSDVWSYGILLWEI 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPE-LF 220
HRD+ NVLL N + + D G +A ++ N R + + APE +F
Sbjct: 175 HRDVAARNVLLTNGHVAKIGDFG-LARDIMNDSNYIVKGN------ARLPVKWMAPESIF 227
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAM 244
CV ++DVWS G LL+ +
Sbjct: 228 D----CVYTVQSDVWSYGILLWEI 247
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 48 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG 105
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 106 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 144
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 145 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 196
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 197 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 248
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 249 YGHDNHDQLVKIAKVLG 265
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 22/89 (24%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQD------VAAERCSMPYR 215
HRDL NVL+ + VVK+C A+++ R + +
Sbjct: 195 HRDLAARNVLVTHGK-------------VVKICDFGLARDIMSDSNYVVRGNARLPVKWM 241
Query: 216 APELFHVDSYCVVDQRTDVWSLGCLLYAM 244
APE Y + ++DVWS G LL+ +
Sbjct: 242 APESLFEGIYTI---KSDVWSYGILLWEI 267
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 103/271 (38%), Gaps = 66/271 (24%)
Query: 25 SDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK---KIICHGREDQAQA----------- 70
++ + ++ K+G+G F V L +H KK YA+K I + R + +A
Sbjct: 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDI 93
Query: 71 --IREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV 128
V++H F++ DH M L + P G ++ +
Sbjct: 94 NNNNIVKYHGKFMY------YDH-----------------MCLIFEPLGPSLYEI----I 126
Query: 129 GKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLL--------------AN 174
++ + I + L E +K + + ++ H DLK N+LL
Sbjct: 127 TRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186
Query: 175 DNNPL-LMDLGSVAPAVVKV-CGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRT 232
D + + S ++ C + ++ + R YRAPE+ + D +
Sbjct: 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTR---QYRAPEVILNLGW---DVSS 240
Query: 233 DVWSLGCLLYAMCYFKSPFDTVYERGDSVAL 263
D+WS GC+L A Y S +E + +A+
Sbjct: 241 DMWSFGCVL-AELYTGSLLFRTHEHMEHLAM 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ + + + V +++ G L
Sbjct: 54 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------VITENPVWIIMELCTLGELR 103
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
+ L++R S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 104 SFLQVRKY------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 157
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 158 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 206
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 207 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 243
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ V+ P + L
Sbjct: 52 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELC 95
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 96 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 155
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 156 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 204
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 205 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 241
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPE-LF 220
HRD+ NVLL N + + D G +A ++ N R + + APE +F
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFG-LARDIMNDSNYIVKGN------ARLPVKWMAPESIF 233
Query: 221 HVDSYCVVDQRTDVWSLGCLLYAM 244
CV ++DVWS G LL+ +
Sbjct: 234 D----CVYTVQSDVWSYGILLWEI 253
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ V+ P + L
Sbjct: 49 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELC 92
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 93 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 153 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 201
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 202 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 238
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 104/296 (35%), Gaps = 77/296 (26%)
Query: 7 NLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALK-----KIIC 61
NL FQ G L + KY++ IG+G + V + +QT+ A+K KI
Sbjct: 13 NLYFQGGSLLELQK------KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66
Query: 62 HGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLAN 121
+D + EV K HPNI L + V + +V+ G L +
Sbjct: 67 INPKDVERIKTEVRLMKKLHHPNIARLYE---------VYEDEQYICLVMELCHGGHLLD 117
Query: 122 DLEL---RSVGK--------------------------HYMSSVDILK-------MFLKI 145
L + S GK + S+D ++ + +I
Sbjct: 118 KLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177
Query: 146 CEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDV 205
A+ H+ HRD+K N L + + S +V S E L +
Sbjct: 178 FSALHYLHNQ---GICHRDIKPENFLFSTNK--------SFEIKLVDFGLSKEFYKLNNG 226
Query: 206 A----AERCSMPYR-APELFHV--DSYCVVDQRTDVWSLGCLLYAMCYFKSPFDTV 254
+ PY APE+ + +SY + D WS G LL+ + PF V
Sbjct: 227 EYYGMTTKAGTPYFVAPEVLNTTNESY---GPKCDAWSAGVLLHLLLMGAVPFPGV 279
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ V+ P + L
Sbjct: 46 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELC 89
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 90 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 149
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 150 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 198
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 199 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 235
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ V+ P + L
Sbjct: 49 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELC 92
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 93 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 152
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 153 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 201
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 202 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 238
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 28 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG 85
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 86 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 124
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 125 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 176
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 177 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 228
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 229 YGHDNHDQLVKIAKVLG 245
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 61 CHGREDQAQAIREVEHHKTFVHPNILPLLDHALTGCADPVLNSTSQVLMVLPYYPKGTLA 120
C + + ++E + F HP+I+ L+ V+ P + L
Sbjct: 51 CTSDSVREKFLQEALTMRQFDHPHIVKLIG----------------VITENPVWIIMELC 94
Query: 121 NDLELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLL 180
ELRS + S+D+ + L + + + HRD+ NVL+++++ L
Sbjct: 95 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL 154
Query: 181 MDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-C 239
D G + E + + + + APE + + +DVW G C
Sbjct: 155 GDFG--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVC 203
Query: 240 LLYAMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + + PF V + D + + P N P
Sbjct: 204 MWEILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 240
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 124 ELRSVGKHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDL 183
ELRS + S+D+ + L + + + HRD+ NVL+++++ L D
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 535
Query: 184 GSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLG-CLLY 242
G + E + + + + APE + + +DVW G C+
Sbjct: 536 G--------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMWE 584
Query: 243 AMCYFKSPFDTVYERGDSVALAVISGNITFPENTP 277
+ + PF V + D + + P N P
Sbjct: 585 ILMHGVKPFQGV-KNNDVIGRIENGERLPMPPNCP 618
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 25/132 (18%)
Query: 160 YAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAER---CSM---P 213
+ HRD+ N LL G VA K+ AQ++ + R C+M
Sbjct: 162 FIHRDIAARNCLLTCPGP------GRVA----KIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 214 YRAPELFHVDSYCVVDQRTDVWSLGCLLY---AMCYFKSPFDTVYERGDSVALAVISGNI 270
+ PE F + +TD WS G LL+ ++ Y P + E + G +
Sbjct: 212 WMPPEAFMEG---IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEFVTSGGRM 265
Query: 271 TFPENTPFPQYQ 282
P+N P P Y+
Sbjct: 266 DPPKNCPGPVYR 277
>pdb|2OJP|A Chain A, The Crystal Structure Of A Dimeric Mutant Of
Dihydrodipicolinate Synthase From E.Coli- Dhdps-L197y
pdb|2OJP|B Chain B, The Crystal Structure Of A Dimeric Mutant Of
Dihydrodipicolinate Synthase From E.Coli- Dhdps-L197y
Length = 292
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 3 TMGLNLIFQMGCLCSKEAVYVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICH 62
T L + Q+ L S + V + D ++ + GG +S+ + + + K+
Sbjct: 164 TGNLTRVNQIKELVSDDFVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAE 223
Query: 63 GREDQAQAIREVE---HHKTFVHPNILPL 88
G +A+ I E H+K FV PN +P+
Sbjct: 224 GHFAEARVINERLMPLHNKLFVEPNPIPV 252
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 28 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG 85
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 86 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 124
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 125 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 176
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ VA S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 177 YHPGKEYNVR-VA----SRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 228
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 229 YGHDNHDQLVKIAKVLG 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 162 HRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFH 221
HRDL N L+ N + D G V A + L+ V + + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGV--XAASGGLRQVPVK-----WTAPEALN 288
Query: 222 VDSYCVVDQRTDVWSLGCLLY 242
Y +DVWS G LL+
Sbjct: 289 YGRY---SSESDVWSFGILLW 306
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-----VASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 29 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG 86
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 87 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 125
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 126 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 177
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ VA S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 178 YHPGKEYNVR-VA----SRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 229
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 230 YGHDNHDQLVKIAKVLG 246
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 22 YVKSDKYYIVEKIGEGGFSTVSLIEHSQTKKRYALKKIICHGREDQAQAIREVEHHKTFV 81
+ + D Y +V K+G G +S V E I + +
Sbjct: 27 WGEQDDYEVVRKVGRGKYSEV--FEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG 84
Query: 82 HPNILPLLD-----HALTGCA--DPVLNSTSQVLMVLPYYPKGTLANDLELRSVGKHYMS 134
PNI+ LLD H+ T + V N+ +VL YP ++
Sbjct: 85 GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----YPT----------------LT 123
Query: 135 SVDILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPL-LMDLGSVAPAVVKV 193
DI ++ +A+ H HRD+K NV++ ++ L L+D G + +
Sbjct: 124 DYDIRYYIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEF 175
Query: 194 CGSAEAQNLQDVAAERCSMPYRAPELF-HVDSYCVVDQRTDVWSLGCLLYAMCYFKSPFD 252
+ N++ VA S ++ PEL + Y D D+WSLGC+ M + K PF
Sbjct: 176 YHPGKEYNVR-VA----SRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPFF 227
Query: 253 TVYERGDS-VALAVISG 268
++ D V +A + G
Sbjct: 228 YGHDNHDQLVKIAKVLG 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 32/199 (16%)
Query: 63 GREDQAQAIREVEH------HKTFVHPNIL-PLLDHALTGCADPVLNSTSQVLMVLPYYP 115
G + QA AI+ ++ + F H +L L H C V+ + M+ Y
Sbjct: 36 GEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 95
Query: 116 KGTLANDLELRS----VG--------KHYMSSVDILKMFLKICEAVKVFHDAKPIAYAHR 163
G L L +RS VG K + D + + +I ++ + H+
Sbjct: 96 HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVV---HK 152
Query: 164 DLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSAEAQNLQDVAAERCSMPYRAPELFHVD 223
DL T NVL+ + N + DLG + + +A+ L + + + APE
Sbjct: 153 DLATRNVLVYDKLNVKISDLG-----LFREVYAADYYKL--LGNSLLPIRWMAPEAIMYG 205
Query: 224 SYCVVDQRTDVWSLGCLLY 242
+ + +D+WS G +L+
Sbjct: 206 KFSI---DSDIWSYGVVLW 221
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 41/227 (18%)
Query: 34 IGEGGFSTV--SLIEHSQTKKRYALKKIICHG-REDQAQAIREVEHH-KTFVHPNILPLL 89
IGEG F V + I+ + A+K++ + ++D E+E K HPNI+ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 90 DHALTGCADPVLNSTSQVLMVLPYYPKGTLANDLELRSV------------GKHYMSSVD 137
C + + + Y P G L + L V +SS
Sbjct: 93 ----GAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 138 ILKMFLKICEAVKVFHDAKPIAYAHRDLKTANVLLANDNNPLLMDLGSVAPAVVKVCGSA 197
+L + + + + HRDL N+L+ + + D G V V +
Sbjct: 144 LLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 198 EAQNLQDVAAERCSMPYRAPELFHVDSYCVVDQRTDVWSLGCLLYAM 244
++ +A E + Y V +DVWS G LL+ +
Sbjct: 201 GRLPVRWMAIESLN-------------YSVYTTNSDVWSYGVLLWEI 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,206,325
Number of Sequences: 62578
Number of extensions: 320195
Number of successful extensions: 3221
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 749
Number of HSP's that attempted gapping in prelim test: 1496
Number of HSP's gapped (non-prelim): 1131
length of query: 282
length of database: 14,973,337
effective HSP length: 98
effective length of query: 184
effective length of database: 8,840,693
effective search space: 1626687512
effective search space used: 1626687512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)