BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16958
         (257 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8LJT8|TKI1_ARATH TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1
           PE=1 SV=2
          Length = 743

 Score = 32.3 bits (72), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 22/96 (22%)

Query: 168 IEEVIIARLRIGHTRVSHSYLIDKKPRPICDTCHTPLSVAHI------------LIECTK 215
           I++ +  +  +G TR    YL  K P  +C     PLS A++            + ECT+
Sbjct: 277 IDKDMDDQTDLGPTR----YLTGKSPLSLCSAGDVPLSDANMQFSAKLKLQLFPIDECTR 332

Query: 216 FQVERQKLLPH-PLTLENLLGNNKETIDSTLKYLYK 250
             +E  K  PH  LTL     +N++ I S L++L +
Sbjct: 333 RSLEMDKHNPHLELTL-----SNRKKISSVLEHLNR 363


>sp|P19454|CSK22_YEAST Casein kinase II subunit alpha' OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=CKA2 PE=1 SV=2
          Length = 339

 Score = 31.6 bits (70), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 122 TFKLPNISSSYTAEIIALQKCIQFITQNKKIKPETQYWPTSSRQKRIEEVIIARL 176
           TFKLP+I   +T  +IAL  C      ++ +KP+      + R+ R+ +  +A  
Sbjct: 138 TFKLPDIQYYFTQLLIALDYCHSMGIMHRDVKPQNVMIDPTERKLRLIDWGLAEF 192


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.132    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,497,900
Number of Sequences: 539616
Number of extensions: 3750816
Number of successful extensions: 9170
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9166
Number of HSP's gapped (non-prelim): 12
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)