BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16960
(69 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4D2P6|GRD2I_HUMAN Delphilin OS=Homo sapiens GN=GRID2IP PE=2 SV=2
Length = 1211
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 28 LYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHIH 66
L GSPAD + L+ GD IL +NG + NC+H++V++ +
Sbjct: 305 LPGSPADNAALKSGDRILFLNGLDMR-NCSHDKVVSMLQ 342
>sp|Q80VW5|WHRN_MOUSE Whirlin OS=Mus musculus GN=Dfnb31 PE=1 SV=3
Length = 918
Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GS A+ S L++GD+ILEVNG++F N H+E +
Sbjct: 313 GSEAESSGLKVGDQILEVNGRSFL-NILHDEAV 344
>sp|Q0QWG9|GRD2I_MOUSE Delphilin OS=Mus musculus GN=Grid2ip PE=1 SV=1
Length = 1203
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 28 LYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHIH 66
L GSPA+ + L+ GD IL +NG + NC+H++V++ +
Sbjct: 294 LPGSPAENASLKSGDRILFLNGLDMR-NCSHDKVVSMLQ 331
>sp|Q9P202|WHRN_HUMAN Whirlin OS=Homo sapiens GN=DFNB31 PE=1 SV=3
Length = 907
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GS A+ S L++GD+ILEVNG++F N H+E +
Sbjct: 312 GSEAEGSGLKVGDQILEVNGRSFL-NILHDEAV 343
>sp|Q810W9|WHRN_RAT Whirlin OS=Rattus norvegicus GN=Dfnb31 PE=1 SV=1
Length = 920
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 30 GSPADKSDLEIGDEILEVNGKTF 52
GS A+ S L++GD+ILEVNG++F
Sbjct: 311 GSEAESSGLKVGDQILEVNGRSF 333
>sp|Q9QXY1|ZO3_MOUSE Tight junction protein ZO-3 OS=Mus musculus GN=Tjp3 PE=1 SV=1
Length = 905
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
GSPAD ++ GDEIL+VNG F++
Sbjct: 400 GSPADGQGIQEGDEILQVNGMPFRN 424
>sp|Q9Y6N9|USH1C_HUMAN Harmonin OS=Homo sapiens GN=USH1C PE=1 SV=3
Length = 552
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
G AD L++GDEI+ +NG + +C H EVI I
Sbjct: 120 GGQADSVGLQVGDEIVRINGYSIS-SCTHEEVINLI 154
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GS + + LEIGD+I+EVNG F N +H E +
Sbjct: 244 GSLSAEVGLEIGDQIVEVNGVDFS-NLDHKEAV 275
>sp|Q9ES64|USH1C_MOUSE Harmonin OS=Mus musculus GN=Ush1c PE=1 SV=1
Length = 910
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
G AD L++GDEI+ +NG + +C H EVI I
Sbjct: 120 GGQADSVGLQVGDEIVRINGYSIS-SCTHEEVINLI 154
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GS + + LE GD+I+EVNG F N +H E +
Sbjct: 244 GSLSAEVGLETGDQIVEVNGIDFT-NLDHKEAV 275
>sp|Q9JJ19|NHRF1_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus
norvegicus GN=Slc9a3r1 PE=1 SV=3
Length = 356
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA+KS L GD ++EVNG+ + H +V++ I
Sbjct: 45 GSPAEKSGLLAGDRLVEVNGENVEKE-THQQVVSRI 79
>sp|P70441|NHRF1_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Mus musculus
GN=Slc9a3r1 PE=1 SV=3
Length = 355
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA+KS L GD ++EVNG+ + H +V++ I
Sbjct: 45 GSPAEKSGLLAGDRLVEVNGENVEKE-THQQVVSRI 79
>sp|Q3SZK8|NHRF1_BOVIN Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Bos taurus
GN=SLC9A3R1 PE=2 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 24 GKVKLY------GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GKV Y GSPA+KS L GD ++EVNG+ + H +V+ I
Sbjct: 33 GKVGQYIRLVEPGSPAEKSGLLAGDRLVEVNGENVEKE-THQQVVNRI 79
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHIH 66
GSPA+K+ ++ D+I++VNGK+ K N NE + I
Sbjct: 125 GSPAEKAGIKPRDQIIKVNGKSVK-GMNVNEAVALIR 160
>sp|Q6ZM86|GRD2I_DANRE Delphilin OS=Danio rerio GN=grid2ip PE=3 SV=1
Length = 1009
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHIH 66
GSPA+ L+ GD IL +NG + NC+H +V++ +
Sbjct: 123 GSPAEACGLKTGDRILFLNGLDMR-NCSHEKVVSMLQ 158
>sp|Q28619|NHRF1_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Oryctolagus
cuniculus GN=SLC9A3R1 PE=1 SV=3
Length = 358
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 24 GKVKLY------GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GKV Y GSPA+K+ L GD ++EVNG+ + H +V++ I
Sbjct: 33 GKVGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKE-THQQVVSRI 79
>sp|O14745|NHRF1_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Homo sapiens
GN=SLC9A3R1 PE=1 SV=4
Length = 358
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA+K+ L GD ++EVNG+ + H +V++ I
Sbjct: 45 GSPAEKAGLLAGDRLVEVNGENVEKE-THQQVVSRI 79
>sp|Q3T0X8|NHRF3_BOVIN Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Bos taurus
GN=PDZK1 PE=2 SV=1
Length = 520
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 13 GYCIIIAETPDG---KVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
G+ + I + DG +V GSPA+K+ L+ GD +L +NG F D H +V+
Sbjct: 21 GFFLRIEKDTDGHLVRVIEKGSPAEKAGLQDGDRVLRING-VFVDKEEHMQVV 72
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 13 GYCIIIAETPDGKVKLYG-----SPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GY + E+P+ K ++ SPA+K+ L+ D ++ VNGK+ ++ +H+ V+ I
Sbjct: 251 GYGFYLRESPEQKGQIIKDIDPKSPAEKAGLKNNDLVVAVNGKSV-ESLDHDSVVEMI 307
>sp|Q3MHQ0|USH1C_BOVIN Harmonin OS=Bos taurus GN=USH1C PE=2 SV=1
Length = 551
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 33 ADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
AD L++GDEI+ +NG + +C H EVI I
Sbjct: 123 ADSVGLQVGDEIVRINGYSIS-SCTHEEVINLI 154
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GS + + LE GD+I+EVNG F N +H E +
Sbjct: 244 GSLSAEVGLETGDQIVEVNGIDFS-NLDHKEAV 275
>sp|Q4R6G4|NHRF1_MACFA Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Macaca
fascicularis GN=SLC9A3R1 PE=2 SV=1
Length = 358
Score = 32.3 bits (72), Expect = 0.94, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA+K+ L GD ++EVNG+ + H +V++ I
Sbjct: 45 GSPAEKAGLLAGDRLVEVNGENVEKE-THQQVVSRI 79
>sp|Q92J66|Y203_RICCN Putative zinc metalloprotease RC0203 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0203 PE=3 SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 31 SPADKSDLEIGDEILEVNGKTFKD 54
SPA+++DL GD+I++VN K+ KD
Sbjct: 138 SPAERADLRAGDKIVKVNDKSVKD 161
>sp|O67776|Y1964_AQUAE Putative zinc metalloprotease aq_1964 OS=Aquifex aeolicus (strain
VF5) GN=aq_1964 PE=3 SV=1
Length = 429
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 30 GSPADKSDLEIGDEILEVNGK 50
GSPAD+ ++ GD ILEVNGK
Sbjct: 217 GSPADQVGIKPGDLILEVNGK 237
>sp|Q865P3|NHRF3_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Oryctolagus
cuniculus GN=PDZK1 PE=1 SV=1
Length = 518
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
GSPA+K+ L+ GD +L +NG F D H +V+
Sbjct: 41 GSPAEKAGLQDGDRVLRING-VFVDKEEHMQVV 72
>sp|Q5ZM14|NHRF1_CHICK Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Gallus gallus
GN=SLC9A3R1 PE=2 SV=1
Length = 333
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA++S L GD +LEV+G + +H +V+ I
Sbjct: 44 GSPAERSGLRAGDRLLEVDGTNVERE-SHQQVVERI 78
>sp|Q9JIL4|NHRF3_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Mus musculus
GN=Pdzk1 PE=1 SV=1
Length = 519
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 13 GYCIIIAETPDG---KVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
G+ + I + DG +V GSPA+K+ L GD +L +NG F D H +V+
Sbjct: 21 GFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRING-VFVDKEEHAQVV 72
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
G PADK+ LE D I+EVNG+ ++
Sbjct: 409 GGPADKAGLENEDVIIEVNGENVQE 433
>sp|Q6ZMN7|PZRN4_HUMAN PDZ domain-containing RING finger protein 4 OS=Homo sapiens
GN=PDZRN4 PE=1 SV=3
Length = 1036
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 28 LYGSPADKSD-LEIGDEILEVNGKTFKDNCNHNEVI 62
L PAD++D LEI D+I+EVNGK H E +
Sbjct: 262 LENGPADRADGLEIHDKIMEVNGKDLS-KATHEEAV 296
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 32 PADKSDLEIGDEILEVNGKTFKDNCNHNEV 61
PA ++ + +GD++LEVNG +D +H V
Sbjct: 754 PAARAGVRVGDKLLEVNGVALQDAEHHEAV 783
>sp|Q86UL8|MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Homo sapiens GN=MAGI2 PE=1 SV=3
Length = 1455
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ + L++GD IL VNG++ N H +++ I D
Sbjct: 960 GSPADRCAKLKVGDRILAVNGQSII-NMPHADIVKLIKD 997
>sp|Q9JJ40|NHRF3_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Rattus
norvegicus GN=Pdzk1 PE=1 SV=2
Length = 523
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 13 GYCIIIAETPDG---KVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
G+ + I + DG +V GSPA+K+ L GD +L +NG F D H +V+
Sbjct: 21 GFFLRIEKDTDGHLVRVIEEGSPAEKAGLLDGDRVLRING-VFVDKEEHAQVV 72
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
G PADK+ LE D I+EVNG+ +D
Sbjct: 409 GGPADKAGLENEDIIIEVNGENVQD 433
>sp|O88382|MAGI2_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Rattus norvegicus GN=Magi2 PE=1 SV=1
Length = 1277
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ + L++GD IL VNG++ N H +++ I D
Sbjct: 960 GSPADRCAKLKVGDRILAVNGQSII-NMPHADIVKLIKD 997
>sp|Q9WVQ1|MAGI2_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Mus musculus GN=Magi2 PE=1 SV=2
Length = 1275
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ + L++GD IL VNG++ N H +++ I D
Sbjct: 959 GSPADRCAKLKVGDRILAVNGQSII-NMPHADIVKLIKD 996
>sp|A4XSC0|DEGPL_PSEMY Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_1471 PE=3 SV=1
Length = 474
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 28 LYGSPADKSDLEIGDEILEVNGK 50
L PADK L++GD IL +NGK
Sbjct: 300 LEDGPADKGGLQVGDVILSLNGK 322
>sp|Q9Y4G8|RPGF2_HUMAN Rap guanine nucleotide exchange factor 2 OS=Homo sapiens GN=RAPGEF2
PE=1 SV=1
Length = 1499
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
GS A ++ L+ GD+ILEVNG+ F++
Sbjct: 419 GSKATEAGLKRGDQILEVNGQNFEN 443
>sp|Q8CT52|HTRAL_STAES Serine protease HtrA-like OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=SE_0722/SE_0723 PE=3 SV=2
Length = 585
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 24 GKVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
G+VK G DK+ L+ GD I+E++GK +DN + +VI
Sbjct: 520 GEVKENG-LGDKAGLKKGDVIVELDGKKIEDNLRYRQVI 557
>sp|Q5HQE2|HTRAL_STAEQ Serine protease HtrA-like OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=SERP0611 PE=3 SV=1
Length = 585
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 24 GKVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHNEVI 62
G+VK G DK+ L+ GD I+E++GK +DN + +VI
Sbjct: 520 GEVKENG-LGDKAGLKKGDVIVELDGKKIEDNLRYRQVI 557
>sp|Q8BH60|GOPC_MOUSE Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Mus musculus GN=Gopc PE=1 SV=1
Length = 463
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVIT 63
G PAD+ L +GD IL VNG +D H E +T
Sbjct: 322 GQPADRCGGLHVGDAILAVNGVNLRDT-KHKEAVT 355
>sp|Q24008|INAD_DROME Inactivation-no-after-potential D protein OS=Drosophila
melanogaster GN=inaD PE=1 SV=2
Length = 674
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 12 KGYCIIIAETPDGKVKLYGSPADKSDLEIGDEILEVNGKTFKDNCNHN 59
K C + P+G + GS D++ GDEI+EVNG K+ C+ N
Sbjct: 272 KMACFVAGVDPNGAL---GS----VDIKPGDEIVEVNGNVLKNRCHLN 312
>sp|O62683|ZO3_CANFA Tight junction protein ZO-3 OS=Canis familiaris GN=TJP3 PE=1 SV=1
Length = 898
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
GSPAD ++ GD+IL+VN F++
Sbjct: 401 GSPADGQGIQEGDQILQVNDVPFRN 425
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 33 ADKSDLEIGDEILEVNGKTFKDNCNHNEVITHIHDP 68
A +S L +GD IL VNG+ +D H E ++ + P
Sbjct: 1047 AARSGLRVGDRILAVNGQDVRD-ATHQEAVSALLRP 1081
>sp|Q8SQG9|NHRF2_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Oryctolagus
cuniculus GN=SLC9A3R2 PE=1 SV=1
Length = 316
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEV 61
GSPA+ + L GD ++EVNG + +H V
Sbjct: 42 GSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
>sp|Q99MJ6|NHRF4_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF4 OS=Mus musculus
GN=Pdzd3 PE=1 SV=1
Length = 498
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
G PADK+ ++ GD ++ V G++ D H E ++ I
Sbjct: 297 GLPADKAGMKAGDRLVAVAGESV-DGLGHEETVSRI 331
>sp|Q4L1J4|MAGI1_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Rattus norvegicus GN=Magi1 PE=1 SV=1
Length = 1255
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 32 PADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
PA++ + IGDEILE+NG+T K N H+ I I +
Sbjct: 1185 PAERCGKMRIGDEILEINGETTK-NMKHSRAIELIKN 1220
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ L++GD IL VNG + N +H++++ I +
Sbjct: 1043 GSPADRCGKLKVGDRILAVNGCSIT-NKSHSDIVNLIKE 1080
>sp|Q15599|NHRF2_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Homo sapiens
GN=SLC9A3R2 PE=1 SV=2
Length = 337
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA +S L D ++EVNG+ + H EV+ I
Sbjct: 182 GSPAARSGLRAQDRLIEVNGQNV-EGLRHAEVVASI 216
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEV 61
GSPA+ + L GD ++EVNG + +H V
Sbjct: 42 GSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
>sp|Q9HD26|GOPC_HUMAN Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Homo sapiens GN=GOPC PE=1 SV=1
Length = 462
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVIT 63
G PAD+ L +GD IL VNG +D H E +T
Sbjct: 321 GQPADRCGGLHVGDAILAVNGVNLRDT-KHKEAVT 354
>sp|Q6RHR9|MAGI1_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Mus musculus GN=Magi1 PE=1 SV=1
Length = 1471
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 32 PADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
PA++ + IGDEILE+NG+T K N H+ I I +
Sbjct: 1166 PAERCGKMRIGDEILEINGETTK-NMKHSRAIELIKN 1201
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ L++GD IL VNG + N +H++++ I +
Sbjct: 1024 GSPADRCGKLKVGDRILAVNGCSIT-NKSHSDIVNLIKE 1061
>sp|Q96QZ7|MAGI1_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Homo sapiens GN=MAGI1 PE=1 SV=3
Length = 1491
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 32 PADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
PA++ + IGDEILE+NG+T K N H+ I I +
Sbjct: 1186 PAERCGKMRIGDEILEINGETTK-NMKHSRAIELIKN 1221
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 30 GSPADK-SDLEIGDEILEVNGKTFKDNCNHNEVITHIHD 67
GSPAD+ L++GD IL VNG + N +H++++ I +
Sbjct: 1044 GSPADRCGKLKVGDRILAVNGCSIT-NKSHSDIVNLIKE 1081
>sp|Q9JHL1|NHRF2_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Mus musculus
GN=Slc9a3r2 PE=1 SV=2
Length = 337
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEV 61
GSPA+ + L GD ++EVNG + +H V
Sbjct: 42 GSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEVITHI 65
GSPA S L D ++EVNG+ + H EV+ I
Sbjct: 182 GSPASHSGLRAQDRLIEVNGQNV-EGLRHAEVVARI 216
>sp|Q9DBG9|TX1B3_MOUSE Tax1-binding protein 3 OS=Mus musculus GN=Tax1bp3 PE=1 SV=1
Length = 124
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 30 GSPADKSDLEIGDEILEVNG 49
G PA+ + L+IGD+I++VNG
Sbjct: 63 GGPAEIAGLQIGDKIMQVNG 82
>sp|Q4UMJ0|MFD_RICFE Transcription-repair-coupling factor OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=mfd PE=3 SV=1
Length = 1142
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 3 TSPSHMIDLKGYCIIIAETPDGKVKLYGSPADKSDLEIGDEILEVNGKTFKD 54
T SH +DL+G+ +I E G++K G+ E+ E+LE FKD
Sbjct: 925 TIASHDMDLRGFGNLIGEEQSGQIKEVGT-------ELYQEMLEEQIAIFKD 969
>sp|O14907|TX1B3_HUMAN Tax1-binding protein 3 OS=Homo sapiens GN=TAX1BP3 PE=1 SV=2
Length = 124
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 30 GSPADKSDLEIGDEILEVNG 49
G PA+ + L+IGD+I++VNG
Sbjct: 63 GGPAEIAGLQIGDKIMQVNG 82
>sp|Q920G2|NHRF2_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus
norvegicus GN=Slc9a3r2 PE=1 SV=1
Length = 337
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKDNCNHNEV 61
GSPA+ + L GD ++EVNG + +H V
Sbjct: 42 GSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
>sp|Q8TEU7|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6
PE=1 SV=2
Length = 1601
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 30 GSPADKSDLEIGDEILEVNGKTFKD 54
GS A S L+ GD+I+EVNG+ F++
Sbjct: 564 GSKAADSGLKRGDQIMEVNGQNFEN 588
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,216,273
Number of Sequences: 539616
Number of extensions: 1124929
Number of successful extensions: 2237
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2152
Number of HSP's gapped (non-prelim): 120
length of query: 69
length of database: 191,569,459
effective HSP length: 41
effective length of query: 28
effective length of database: 169,445,203
effective search space: 4744465684
effective search space used: 4744465684
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)