Query psy16971
Match_columns 383
No_of_seqs 171 out of 242
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 18:24:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d7b_A Cellobiose dehydrogenas 99.3 1.2E-11 4.2E-16 113.0 11.3 115 3-138 53-176 (186)
2 2ivf_C Ethylbenzene dehydrogen 72.3 5.9 0.0002 36.7 6.0 45 66-112 146-190 (214)
3 1mzy_A Copper-containing nitri 71.6 2.6 9E-05 40.1 3.6 49 242-292 210-265 (333)
4 3cg8_A Laccase; oxidoreductase 68.9 3 0.0001 40.4 3.4 34 244-283 198-235 (343)
5 2bw4_A Copper-containing nitri 67.1 4 0.00014 38.9 3.8 49 242-292 216-271 (340)
6 1kbv_A ANIA, major outer membr 67.0 15 0.0005 35.1 7.7 29 242-270 59-88 (327)
7 3g5w_A Multicopper oxidase typ 66.6 4.6 0.00016 38.6 4.1 36 243-283 166-204 (318)
8 2cal_A Rusticyanin; iron respi 65.9 34 0.0011 29.4 9.2 39 244-286 53-91 (154)
9 2bw4_A Copper-containing nitri 60.8 29 0.001 32.8 8.6 39 242-283 60-99 (340)
10 1oe1_A Dissimilatory copper-co 59.4 6.9 0.00024 37.2 3.9 49 242-292 210-265 (336)
11 1efp_A ETF, protein (electron 58.3 3.2 0.00011 40.1 1.3 31 1-31 247-278 (307)
12 1efv_A Electron transfer flavo 57.0 3.4 0.00012 40.0 1.3 31 1-31 252-283 (315)
13 3aw5_A Multicopper oxidase; be 56.2 8.2 0.00028 38.7 4.0 29 242-271 170-199 (448)
14 2zwn_A Two-domain type laccase 53.7 11 0.00036 36.2 4.2 37 242-283 166-205 (339)
15 2zoo_A Probable nitrite reduct 51.2 47 0.0016 32.6 8.5 30 241-270 48-78 (442)
16 1iby_A Nitrosocyanin; RED copp 51.2 54 0.0018 25.8 7.4 30 251-285 37-66 (112)
17 2aan_A Auracyanin A; cupredoxi 50.9 1E+02 0.0035 25.2 9.7 31 252-286 35-65 (139)
18 2gim_A Plastocyanin; beta shee 50.1 22 0.00076 27.5 4.9 44 217-285 3-46 (106)
19 3kw8_A Laccase, putative coppe 49.6 11 0.00037 35.1 3.4 35 244-283 157-194 (276)
20 1bxv_A Plastocyanin; copper pr 49.5 24 0.00083 26.3 4.8 45 216-285 1-45 (91)
21 3od3_A Blue copper oxidase CUE 49.3 9.5 0.00032 39.0 3.2 41 240-284 376-420 (488)
22 3t9w_A Small laccase, multi-co 49.3 13 0.00045 35.1 4.0 37 243-284 178-217 (299)
23 2lu7_A Obscurin-like protein 1 49.2 16 0.00056 27.4 3.8 27 238-269 23-49 (84)
24 1mzy_A Copper-containing nitri 49.1 59 0.002 30.6 8.6 39 242-283 53-92 (333)
25 1kbv_A ANIA, major outer membr 48.2 12 0.0004 35.8 3.4 38 242-284 199-242 (327)
26 1o97_D Electron transferring f 47.4 3.4 0.00012 40.1 -0.4 29 2-30 258-288 (320)
27 1kdj_A Plastocyanin; electron 47.2 29 0.001 26.7 5.1 26 252-284 17-42 (102)
28 2xu9_A Laccase; oxidoreductase 45.1 16 0.00054 36.3 4.0 29 242-271 178-207 (439)
29 2g23_A PHS, phenoxazinone synt 45.0 19 0.00063 38.0 4.6 39 241-285 254-293 (612)
30 3knb_B Obscurin-like protein 1 44.5 9.8 0.00033 29.8 1.9 30 235-269 38-67 (107)
31 2dv6_A Nitrite reductase; elec 43.3 14 0.00048 36.3 3.2 38 242-284 324-367 (447)
32 2uxt_A Protein SUFI, SUFI; oxi 42.9 22 0.00077 35.4 4.7 66 242-310 183-252 (451)
33 3gdc_A Multicopper oxidase; be 42.1 21 0.0007 33.4 4.0 39 243-284 182-224 (288)
34 2zoo_A Probable nitrite reduct 41.6 20 0.00067 35.3 4.0 37 243-284 190-232 (442)
35 1zpu_A Iron transport multicop 39.6 23 0.0008 36.2 4.3 31 242-272 168-199 (534)
36 1pcs_A Plastocyanin; electron 37.5 37 0.0013 25.9 4.2 27 252-285 19-45 (98)
37 2cua_A Protein (CUA); CUA cent 37.0 1.1E+02 0.0036 25.8 7.4 26 253-284 61-86 (135)
38 3zx1_A Oxidoreductase, putativ 36.7 28 0.00096 35.4 4.3 37 243-284 372-412 (481)
39 2dv6_A Nitrite reductase; elec 36.0 34 0.0012 33.5 4.7 29 242-270 184-213 (447)
40 2plt_A Plastocyanin; electron 35.9 49 0.0017 25.1 4.7 27 252-285 18-44 (98)
41 2j5w_A Ceruloplasmin, ferroxid 35.8 28 0.00097 38.8 4.5 77 240-326 256-336 (1065)
42 2zwn_A Two-domain type laccase 35.8 29 0.00099 33.2 4.1 28 242-269 24-52 (339)
43 3cvb_A Plastocyanin; cupredoxi 35.2 47 0.0016 25.4 4.5 26 355-381 68-93 (105)
44 3tas_A Small laccase, multi-co 34.8 25 0.00086 33.3 3.4 34 244-283 163-200 (313)
45 3zx1_A Oxidoreductase, putativ 33.7 54 0.0019 33.3 5.9 30 242-271 71-101 (481)
46 1v10_A Laccase; multicopper bl 33.7 35 0.0012 34.7 4.4 30 243-272 193-233 (521)
47 1he7_A High affinity nerve gro 32.2 23 0.0008 29.5 2.4 20 234-253 24-43 (126)
48 1hfu_A Laccase 1; oxidoreducta 31.8 39 0.0013 34.1 4.4 30 243-272 167-206 (503)
49 2xu9_A Laccase; oxidoreductase 31.2 1.1E+02 0.0037 30.2 7.5 29 242-270 36-65 (439)
50 2lvc_A Obscurin-like protein 1 30.6 33 0.0011 26.0 2.9 27 238-269 33-59 (91)
51 4hci_A Cupredoxin 1; structura 30.2 1.4E+02 0.0047 22.9 6.5 25 355-381 65-89 (100)
52 1oe1_A Dissimilatory copper-co 29.9 90 0.0031 29.4 6.4 40 242-284 54-94 (336)
53 1sdd_A Coagulation factor V; c 29.4 5.9 0.0002 37.5 -2.0 37 243-283 203-243 (306)
54 1b3i_A PETE protein, protein ( 29.2 43 0.0015 25.5 3.3 28 252-286 19-46 (97)
55 1wwb_X Protein (brain derived 28.8 26 0.00089 26.7 2.0 20 234-253 25-44 (103)
56 1sdd_B Coagulation factor V; c 28.0 50 0.0017 34.3 4.6 30 241-270 226-258 (647)
57 1qhq_A Protein (auracyanin); e 27.5 1.1E+02 0.0038 25.0 5.8 30 252-285 33-63 (140)
58 1plc_A Plastocyanin; electron 26.0 98 0.0033 23.5 4.9 27 252-285 17-43 (99)
59 3pxl_A Laccase; 4-copper prote 24.8 62 0.0021 32.9 4.5 43 242-284 167-221 (499)
60 4awd_A Beta-porphyranase; hydr 24.8 56 0.0019 31.7 3.9 12 240-251 251-262 (324)
61 3tu6_A Pseudoazurin (blue copp 23.6 1.5E+02 0.0053 24.5 6.0 17 252-268 23-39 (127)
62 3iln_A Laminarinase; jelly ROW 22.6 68 0.0023 29.4 3.9 12 240-251 177-188 (251)
63 3t6v_A Laccase; beta barrel, o 22.5 73 0.0025 32.3 4.5 42 243-284 170-224 (495)
64 1x5a_A Ephrin type-A receptor 22.3 82 0.0028 24.2 3.8 35 256-290 69-103 (107)
65 1fwx_A Nitrous oxide reductase 21.4 3.5E+02 0.012 28.4 9.4 41 243-285 503-544 (595)
66 3knb_A Titin; IG-like, titin, 21.4 35 0.0012 26.0 1.4 18 235-252 30-47 (100)
67 3juu_A Porphyranase B; glycosi 21.3 61 0.0021 30.6 3.4 12 240-251 212-223 (280)
68 4atf_A Beta-agarase B; hydrola 20.8 96 0.0033 29.9 4.7 11 241-251 210-220 (308)
69 1g1c_A Immunoglobulin-like dom 20.1 1.3E+02 0.0043 21.7 4.4 18 236-253 31-48 (99)
70 2q9o_A Laccase-1; multicopper 20.1 1E+02 0.0035 31.6 5.0 43 242-284 196-250 (559)
No 1
>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*
Probab=99.29 E-value=1.2e-11 Score=113.01 Aligned_cols=115 Identities=13% Similarity=0.152 Sum_probs=91.0
Q ss_pred CCcEEEEeecCCCCCCCCccccEEEEEEeCCCCceEEEEeeeeCCCcccCCCCCCCCccccCCccceEEEeeE-EECCEE
Q psy16971 3 FGEYMSFGLSGDPLRNQMIGADVVVAWIDQETLNGYAVDYYLTDKSQCAGGRGSCPDYRIQDNTESVRLLNAA-LVNGYS 81 (383)
Q Consensus 3 e~~YmAFG~S~~~~~~~M~GADVVVa~vD~~~G~~~a~Dyyit~~s~C~~~~GvcPDt~~gdgtnDi~Lvsg~-r~nGvT 81 (383)
..+|+||||++ .|.|++++|+|.|+ |+.++.+|+.+++.++ . .+ ++..+++|+.++ .++++.
T Consensus 53 ~~gW~g~g~Gg-----~M~gs~l~v~w~~~--~~v~~S~R~a~g~~~P--------~-~y-~~~~~~~lL~gs~vn~t~~ 115 (186)
T 1d7b_A 53 ASKWIGIALGG-----AMNNDLLLVAWANG--NQIVSSTRWATGYVQP--------T-AY-TGTATLTTLPETTINSTHW 115 (186)
T ss_dssp TCCEEEEETTS-----SSSSSCEEEEEEET--TEEEEEEEECSSSSCC--------E-EC-CSSCEEEECTTCEECSSEE
T ss_pred CCCEEEEecCC-----CCCCCcEEEEEeCC--CEEEEEEEEecCccCC--------C-cc-CCCceEEEcccccEeCCEE
Confidence 46899999974 79999999999986 8999999999999763 2 23 478999999999 788899
Q ss_pred EEEEEccCCCCCCC--CccccCCCcEEEEEeeCCCCCcc------cccccccccCcceEEEeCCC
Q psy16971 82 IVTYQRPLRSHDIL--DHDIYTNQSQAIIWAIGPLNSKQ------EVSFHSVFPKKNILFNFGRT 138 (383)
Q Consensus 82 ~V~FrRpL~T~D~~--D~~I~~~~t~~VIWA~G~ln~~~------e~s~H~~~~~g~~~I~fg~~ 138 (383)
+++|+|+ .|+.. |..+..+....+|||++..++.+ .+.+|.. .|...++|.+.
T Consensus 116 ~~~f~C~--~C~~w~~~g~~~~ts~~~~iwA~~~~~p~~~~~~~a~~~~H~~--~G~~~~dL~~a 176 (186)
T 1d7b_A 116 KWVFRCQ--GCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTD--FGFFGIDYSTA 176 (186)
T ss_dssp EEEEEEE--TTTBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSE--EEEEEEEGGGC
T ss_pred EEEEEeC--CCcccCCCCccccCCCCeEEEEECCCCCCCCCCCcccchhhhC--cceEEEEcccc
Confidence 9999999 88763 44455444459999997655432 3678866 88889998764
No 2
>2ivf_C Ethylbenzene dehydrogenase gamma-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=72.31 E-value=5.9 Score=36.66 Aligned_cols=45 Identities=18% Similarity=0.067 Sum_probs=35.3
Q ss_pred ccceEEEeeEEECCEEEEEEEccCCCCCCCCccccCCCcEEEEEeeC
Q psy16971 66 TESVRLLNAALVNGYSIVTYQRPLRSHDILDHDIYTNQSQAIIWAIG 112 (383)
Q Consensus 66 tnDi~Lvsg~r~nGvT~V~FrRpL~T~D~~D~~I~~~~t~~VIWA~G 112 (383)
.+++.. .+...+|.-+|+|+|||++ -.+|..+..+.++.|-.|+-
T Consensus 146 ~~~v~~-~a~y~~g~WtVv~~RpL~~-~~~~~~~~~g~~~~vafAvW 190 (214)
T 2ivf_C 146 GSDLKA-VAQHRNGEWNVILCRSMAT-GDGLAKLQAGGSSKIAFAVW 190 (214)
T ss_dssp GCCCEE-EEEEETTEEEEEEEEESCC-CTTSCCCCTTEEEEEEEEEE
T ss_pred CCCcEE-eEEEcCCEEEEEEEEECCC-CcCCcccccCCeEEEEEEEE
Confidence 566644 5567899999999999995 45778887767888888883
No 3
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=71.58 E-value=2.6 Score=40.14 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=32.4
Q ss_pred EEEEEcCee-----cceEEEEeCCeEEEEEEcCCCCCCC--CCcCCeEEecCCCCCcc
Q psy16971 242 ISWYINGLL-----IPEINVVRGKTYTFIVEGGLDPNTP--AKYHPFYITDDSVGGYQ 292 (383)
Q Consensus 242 ~awyiN~~l-----~Pel~v~RG~tYtF~VegG~dp~~~--~~yHP~yItd~~~GG~~ 292 (383)
-.|-|||+. .|.|.|++|++|.|+.-+.+.-+.. -..|.|.+.. .|++-
T Consensus 210 ~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~ 265 (333)
T 1mzy_A 210 SHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE--TGKFH 265 (333)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTT
T ss_pred cEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe--CCccc
Confidence 479999997 5779999999999976443221111 2246677655 36654
No 4
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=68.88 E-value=3 Score=40.39 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=27.4
Q ss_pred EEEcCee---cceEEEEeCCeEEEEEE-cCCCCCCCCCcCCeEE
Q psy16971 244 WYINGLL---IPEINVVRGKTYTFIVE-GGLDPNTPAKYHPFYI 283 (383)
Q Consensus 244 wyiN~~l---~Pel~v~RG~tYtF~Ve-gG~dp~~~~~yHP~yI 283 (383)
|.|||+. .|.|.|++|.+|.|++. .|. ..|||-|
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~------~~HpfHl 235 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGE------YYHTFHM 235 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS------CCEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCc------cccccEe
Confidence 6899987 67899999999999765 343 4599876
No 5
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=67.15 E-value=4 Score=38.93 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=32.5
Q ss_pred EEEEEcCee-----cceEEEEeCCeEEEEEEcCCCCCCCC--CcCCeEEecCCCCCcc
Q psy16971 242 ISWYINGLL-----IPEINVVRGKTYTFIVEGGLDPNTPA--KYHPFYITDDSVGGYQ 292 (383)
Q Consensus 242 ~awyiN~~l-----~Pel~v~RG~tYtF~VegG~dp~~~~--~yHP~yItd~~~GG~~ 292 (383)
-.|-|||+. .|.|.|++|++|.|+.-+-+....+. .-|.|.|.. .|++-
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~--dG~~~ 271 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA--TGKFR 271 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTT
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC--CCccc
Confidence 379999998 49999999999998764433222121 236666654 46653
No 6
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=66.96 E-value=15 Score=35.08 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=25.0
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcCC
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGGL 270 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG~ 270 (383)
-+|-|||. .-|.|.|++|.++.++|.-..
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~ 88 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNP 88 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECT
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECC
Confidence 47999998 689999999999999876543
No 7
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=66.60 E-value=4.6 Score=38.65 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=27.6
Q ss_pred EEEEcCeecce---EEEEeCCeEEEEEEcCCCCCCCCCcCCeEE
Q psy16971 243 SWYINGLLIPE---INVVRGKTYTFIVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 243 awyiN~~l~Pe---l~v~RG~tYtF~VegG~dp~~~~~yHP~yI 283 (383)
.|-|||+..|. |.|++|.+|.|++....+ ..|||-|
T Consensus 166 ~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~-----~~h~~hl 204 (318)
T 3g5w_A 166 YYTINAKSFPETQPIRVKKGDVIRLRLIGAGD-----HVHAIHT 204 (318)
T ss_dssp EEEETTBCBTSSCCEEECTTCEEEEEEEECSS-----SCEEEEE
T ss_pred EEEEcCcCCCCCccEEeCCCCEEEEEEEeCCC-----ceEEEEE
Confidence 79999998776 999999999996554321 2477755
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=65.89 E-value=34 Score=29.35 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=30.2
Q ss_pred EEEcCeecceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEecC
Q psy16971 244 WYINGLLIPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITDD 286 (383)
Q Consensus 244 wyiN~~l~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd~ 286 (383)
--|+|+-.|+|.|+.|.+++|.+.-.++ ..-|=|.|...
T Consensus 53 ~~~~g~~~p~i~V~~GD~V~~~~tN~~~----~~~H~~~i~~~ 91 (154)
T 2cal_A 53 FEVHDKKNPTLEIPAGATVDVTFINTNK----GFGHSFDITKK 91 (154)
T ss_dssp EEETTEESCEEEECTTCEEEEEEEECCT----TCCCCCEEESC
T ss_pred ccccCCCCCEEEEeCCCEEEEEEEcCCC----CeeeEEEEeec
Confidence 3468888899999999999998875322 34688888754
No 9
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=60.82 E-value=29 Score=32.83 Aligned_cols=39 Identities=15% Similarity=0.012 Sum_probs=29.0
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEE
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yI 283 (383)
-+|-|||+ .-|.|.|++|.++.+.|.-.. ..-..|.+-+
T Consensus 60 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~ 99 (340)
T 2bw4_A 60 HAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDF 99 (340)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEE
T ss_pred EEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCccee
Confidence 48999998 589999999999999876543 2234555543
No 10
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=59.44 E-value=6.9 Score=37.19 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=33.7
Q ss_pred EEEEEcCee-----cceEEEEeCCeEEEEEEcCCCCCCC--CCcCCeEEecCCCCCcc
Q psy16971 242 ISWYINGLL-----IPEINVVRGKTYTFIVEGGLDPNTP--AKYHPFYITDDSVGGYQ 292 (383)
Q Consensus 242 ~awyiN~~l-----~Pel~v~RG~tYtF~VegG~dp~~~--~~yHP~yItd~~~GG~~ 292 (383)
-.|-|||+. .|.|.|++|++|.|+.-+.+....+ -.-|.|.+.. .|++-
T Consensus 210 ~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~ 265 (336)
T 1oe1_A 210 SHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA 265 (336)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT
T ss_pred CEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc
Confidence 379999998 5899999999999865443332221 2357777763 56653
No 11
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=58.27 E-value=3.2 Score=40.10 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=25.0
Q ss_pred CCCCcEEEEeecCCCC-CCCCccccEEEEEEe
Q psy16971 1 MEFGEYMSFGLSGDPL-RNQMIGADVVVAWID 31 (383)
Q Consensus 1 ~~e~~YmAFG~S~~~~-~~~M~GADVVVa~vD 31 (383)
+..+-|+|+|+||... ..+|.+|+++|+=-.
T Consensus 247 V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~ 278 (307)
T 1efp_A 247 VAPELYVAVGISGAIQHLAGMKDSKVIVAINK 278 (307)
T ss_dssp CCCSEEEEESCCCCHHHHTTTTTCSEEEEEES
T ss_pred cCCceEEEEeccCcHHHHhhhccCCEEEEEeC
Confidence 3457799999999743 379999999999754
No 12
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=57.03 E-value=3.4 Score=40.01 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=24.8
Q ss_pred CCCCcEEEEeecCCCC-CCCCccccEEEEEEe
Q psy16971 1 MEFGEYMSFGLSGDPL-RNQMIGADVVVAWID 31 (383)
Q Consensus 1 ~~e~~YmAFG~S~~~~-~~~M~GADVVVa~vD 31 (383)
+..+-|+|+|+||... ..+|.+|+++|+=-.
T Consensus 252 V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~ 283 (315)
T 1efv_A 252 VAPELYIAVGISGAIQHLAGMKDSKTIVAINK 283 (315)
T ss_dssp CCCSEEEEESCCCCHHHHTTTTTCSEEEEEES
T ss_pred cCcceEEEecccCcHHHHhhcccCCEEEEEeC
Confidence 3457899999999743 379999999999643
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=56.23 E-value=8.2 Score=38.66 Aligned_cols=29 Identities=21% Similarity=0.387 Sum_probs=25.1
Q ss_pred EEEEEcCeecceEEEEeCCeEEE-EEEcCCC
Q psy16971 242 ISWYINGLLIPEINVVRGKTYTF-IVEGGLD 271 (383)
Q Consensus 242 ~awyiN~~l~Pel~v~RG~tYtF-~VegG~d 271 (383)
-++-|||+..|.|.|++| +|.| .|.+|+.
T Consensus 170 ~~~liNG~~~p~~~v~~g-~~RlRliNa~~~ 199 (448)
T 3aw5_A 170 NAVLVNGVKDAVFKLSGG-SYRLRLVNGSNA 199 (448)
T ss_dssp SEEEETTEETCEEEEEEE-EEEEEEEECSSS
T ss_pred cEEEECCcccceEEECCC-eEEEEEEcCCCc
Confidence 378999999999999999 9999 5667664
No 14
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=53.67 E-value=11 Score=36.23 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=27.8
Q ss_pred EEEEEcCeecce---EEEEeCCeEEEEEEcCCCCCCCCCcCCeEE
Q psy16971 242 ISWYINGLLIPE---INVVRGKTYTFIVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 242 ~awyiN~~l~Pe---l~v~RG~tYtF~VegG~dp~~~~~yHP~yI 283 (383)
-.|-|||+..|. |.|++|++|.|++....+ ..|||-|
T Consensus 166 ~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~-----~~h~~hl 205 (339)
T 2zwn_A 166 DYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGG-----GIHAMHS 205 (339)
T ss_dssp CEEEETTBCTTSSCCEEECTTCEEEEEEEECSS-----SCEEEEE
T ss_pred ceEEEccccCCCcccEEECCCCEEEEEEEeCCC-----ceEEEEE
Confidence 479999998776 999999999997655431 2466655
No 15
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=51.22 E-value=47 Score=32.56 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=26.0
Q ss_pred cEEEEEcCee-cceEEEEeCCeEEEEEEcCC
Q psy16971 241 GISWYINGLL-IPEINVVRGKTYTFIVEGGL 270 (383)
Q Consensus 241 g~awyiN~~l-~Pel~v~RG~tYtF~VegG~ 270 (383)
.-+|-|||+. -|.|.|++|.+..+.|.-..
T Consensus 48 ~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l 78 (442)
T 2zoo_A 48 YVFWSFGETVPGSFIRVREGDEIEFNLSNHP 78 (442)
T ss_dssp EEEEEETTBSSCCBEEEETTCEEEEEEEECT
T ss_pred EEEEEECCcCCCCcEEEeCCCEEEEEEEECC
Confidence 3489999986 99999999999999887653
No 16
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=51.18 E-value=54 Score=25.78 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=22.4
Q ss_pred cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 251 IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 251 ~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
-|+|.|+.|.+++|.+.--+.. -|-|.|.+
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~ 66 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-----SEGFSIDA 66 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-----CEEEEEGG
T ss_pred CCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC
Confidence 4799999999999987654421 57777754
No 17
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=50.86 E-value=1e+02 Score=25.22 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=22.9
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEecC
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITDD 286 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd~ 286 (383)
++|.|+.|.+++|++.--. .. + -|.|.|.+.
T Consensus 35 ~~i~v~~G~~V~~~~~N~~-~~-~--~H~~~i~~~ 65 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS-AV-Q--QHNWILVKG 65 (139)
T ss_dssp SEEEECTTCEEEEEEECCC-SS-C--CBCCEEESS
T ss_pred CeEEECCCCEEEEEEEeCC-CC-C--CeeEEEecc
Confidence 6899999999999886421 11 1 599998764
No 18
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=50.14 E-value=22 Score=27.51 Aligned_cols=44 Identities=14% Similarity=0.264 Sum_probs=30.1
Q ss_pred eeEEEeCCCCccCCCCCccCCCCccEEEEEcCeecceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 217 VLYAQMGPTGGKRGYPAITGHVGWGISWYINGLLIPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 217 ~f~a~~gp~gg~rgy~~iTg~~~~g~awyiN~~l~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
+.+++||..++...|.. +.|.|+.|.|++|.-.+ ..-|.|.|.+
T Consensus 3 t~~V~~~~~~~~~~F~P------------------~~i~v~~Gd~V~~~n~~-------~~~H~~~~~~ 46 (106)
T 2gim_A 3 TYTVKLGSDKGLLVFEP------------------AKLTIKPGDTVEFLNNK-------VPPHNVVFDA 46 (106)
T ss_dssp EEEEEESCTTCCSSEES------------------SEEEECTTCEEEEEECS-------SSCCCBEECS
T ss_pred cEEEEEEecCCcceEcC------------------CEEEECCCCEEEEEECC-------CCCceEEEeC
Confidence 46777875544444543 68999999999997322 1349998765
No 19
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=49.61 E-value=11 Score=35.09 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=27.4
Q ss_pred EEEcCee---cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEE
Q psy16971 244 WYINGLL---IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 244 wyiN~~l---~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yI 283 (383)
|-|||+. .|.|.|++|.++.|++..-.+ ..|||-|
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~-----~~Hp~Hl 194 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-----YYHTFHM 194 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-----CCEEEEE
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCC-----cceeEEE
Confidence 6899985 689999999999997664321 3588876
No 20
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=49.46 E-value=24 Score=26.35 Aligned_cols=45 Identities=16% Similarity=0.304 Sum_probs=30.9
Q ss_pred ceeEEEeCCCCccCCCCCccCCCCccEEEEEcCeecceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 216 GVLYAQMGPTGGKRGYPAITGHVGWGISWYINGLLIPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 216 ~~f~a~~gp~gg~rgy~~iTg~~~~g~awyiN~~l~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
|+++++||..+|.-.|.. ++|.|+.|.+++|.-.+ ..-|.+.+.+
T Consensus 1 r~~~v~~~~~~~~~~f~P------------------~~i~v~~Gd~V~~~n~~-------~~~H~v~~~~ 45 (91)
T 1bxv_A 1 QTVAIKMGADNGMLAFEP------------------STIEIQAGDTVQWVNNK-------LAPHNVVVEG 45 (91)
T ss_dssp CEEEEEESCTTSCSSEES------------------SEEEECTTCEEEEEECS-------SCCEEEEETT
T ss_pred CeEEEEEecCCCccEEeC------------------CEEEECCCCEEEEEECC-------CCCcEEEEeC
Confidence 357788876555444442 58999999999997432 1348887754
No 21
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=49.29 E-value=9.5 Score=39.04 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=30.8
Q ss_pred ccEEEEEcCee----cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 240 WGISWYINGLL----IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 240 ~g~awyiN~~l----~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
|.-+|.|||+. -|.+.|++|.++.+.+....+ ..-|||-|-
T Consensus 376 ~~~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~----~~~Hp~HlH 420 (488)
T 3od3_A 376 FHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGD----MMLHPFHIH 420 (488)
T ss_dssp GGGCEEETTBCCCTTCCSEECCBSSCEEEEEECTTC----CCCEEEEET
T ss_pred ccceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCC----CCCccEEEc
Confidence 44479999985 578999999999999885332 134888763
No 22
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=49.27 E-value=13 Score=35.11 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=28.1
Q ss_pred EEEEcCee---cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 243 SWYINGLL---IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 243 awyiN~~l---~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
.|+|||+. .|.|.++.|.++.++|-+..+ ..|||-|-
T Consensus 178 ~~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~-----~~HpfHlH 217 (299)
T 3t9w_A 178 DMMINNRAHHDAPTFEANLGERVEWIAIGHGS-----NFHTFHLH 217 (299)
T ss_dssp TTEETTCCTTCCCEEEEETTCEEEEEEEEESS-----CCCEEEET
T ss_pred eeeecCccccccccceecCCCEEEEEEEeccc-----cceeeeEe
Confidence 48899985 689999999999996654321 35888773
No 23
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=49.17 E-value=16 Score=27.41 Aligned_cols=27 Identities=19% Similarity=0.379 Sum_probs=18.9
Q ss_pred CCccEEEEEcCeecceEEEEeCCeEEEEEEcC
Q psy16971 238 VGWGISWYINGLLIPEINVVRGKTYTFIVEGG 269 (383)
Q Consensus 238 ~~~g~awyiN~~l~Pel~v~RG~tYtF~VegG 269 (383)
|...+.||-||+.|.. +..|.+..+|+
T Consensus 23 p~p~v~W~k~g~~l~~-----~~~~~~~~~~~ 49 (84)
T 2lu7_A 23 PGGPVRWYKDGERLAS-----QGRVQLEQAGA 49 (84)
T ss_dssp CSTTCEEEETTEECCC-----CSSEEEEECSS
T ss_pred CCcEEEEEECCEEccc-----cccEEEeecCC
Confidence 5566899999998743 55666666554
No 24
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=49.12 E-value=59 Score=30.64 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=29.0
Q ss_pred EEEEEcCee-cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEE
Q psy16971 242 ISWYINGLL-IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 242 ~awyiN~~l-~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yI 283 (383)
-+|-|||+. -|.|.|++|.+..+.|.-. ...-..|.+-+
T Consensus 53 ~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~ 92 (333)
T 1mzy_A 53 QAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDF 92 (333)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEE
T ss_pred EEEEECCccCCCcEEecCCCEEEEEEEEC---CCCccccccee
Confidence 489999986 8999999999999987643 12234565543
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=48.17 E-value=12 Score=35.77 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=29.4
Q ss_pred EEEEEcCeecc-----eEEEEeCCeEEEE-EEcCCCCCCCCCcCCeEEe
Q psy16971 242 ISWYINGLLIP-----EINVVRGKTYTFI-VEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 242 ~awyiN~~l~P-----el~v~RG~tYtF~-VegG~dp~~~~~yHP~yIt 284 (383)
-.|-|||+..| .|.|++|++|.|+ +.+|. ...|+|.|-
T Consensus 199 ~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~-----~~~~~~~l~ 242 (327)
T 1kbv_A 199 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGP-----NLVSSFHVI 242 (327)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEES-----SCCEEEEEE
T ss_pred ceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCC-----CCceeEEEe
Confidence 37889999875 6999999999995 55554 346888874
No 26
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=47.39 E-value=3.4 Score=40.12 Aligned_cols=29 Identities=21% Similarity=0.226 Sum_probs=23.6
Q ss_pred CC-CcEEEEeecCCCC-CCCCccccEEEEEE
Q psy16971 2 EF-GEYMSFGLSGDPL-RNQMIGADVVVAWI 30 (383)
Q Consensus 2 ~e-~~YmAFG~S~~~~-~~~M~GADVVVa~v 30 (383)
.. +-|+|+|+||... ..+|.+|+++|+=-
T Consensus 258 ~P~~lYiA~GISGAiQHlaGm~~s~~IVAIN 288 (320)
T 1o97_D 258 GSCKLYVAMGISGSIQHMAGMKHVPTIIAVN 288 (320)
T ss_dssp TTCSEEEEESCCCCHHHHHHHTTCSEEEEEC
T ss_pred cccceEEEEeccCcHHHHhhcccCCEEEEEe
Confidence 45 7799999998743 37899999999854
No 27
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=47.21 E-value=29 Score=26.69 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=20.3
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
++|.|+.|.|++|.-.+ ..-|.|.|.
T Consensus 17 ~~i~v~~G~tV~~~n~~-------~~~H~~~~~ 42 (102)
T 1kdj_A 17 DSITVSAGEAVEFTLVG-------ETGHNIVFD 42 (102)
T ss_dssp SEEEECTTCCEEEEECS-------SSCBCCEEC
T ss_pred CEEEECCCCEEEEEECC-------CCCeEEEEe
Confidence 68999999999997332 135999886
No 28
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=45.12 E-value=16 Score=36.26 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=24.8
Q ss_pred EEEEEcCeecceEEEEeCCeEEE-EEEcCCC
Q psy16971 242 ISWYINGLLIPEINVVRGKTYTF-IVEGGLD 271 (383)
Q Consensus 242 ~awyiN~~l~Pel~v~RG~tYtF-~VegG~d 271 (383)
-.+-|||+..|.|.|++| +|.| +|.+|++
T Consensus 178 ~~~~iNG~~~p~l~v~~g-~~RlRliN~~~~ 207 (439)
T 2xu9_A 178 DLVLVNGALRPTLVAQKA-TLRLRLLNASNA 207 (439)
T ss_dssp SEEEETTEESCEEECSSS-EEEEEEEECCSS
T ss_pred CEEEECCccCCcEEecCC-eEEEEEEecCCC
Confidence 378899999999999999 9999 5666664
No 29
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=45.02 E-value=19 Score=37.98 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=30.3
Q ss_pred cEEEEEcCeecceEEEEeCCeEEE-EEEcCCCCCCCCCcCCeEEec
Q psy16971 241 GISWYINGLLIPEINVVRGKTYTF-IVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 241 g~awyiN~~l~Pel~v~RG~tYtF-~VegG~dp~~~~~yHP~yItd 285 (383)
+=+--|||+..|.|.|++| +|.| +|.+++. ++.-|.|.+
T Consensus 254 gd~~lVNG~~~p~~~V~~g-~yRlRliNas~~-----r~~~l~i~~ 293 (612)
T 2g23_A 254 GPYTTVNGRIWPYADVDDG-WYRLRLVNASNA-----RIYNLVLID 293 (612)
T ss_dssp CSEEEETTEESCEEEEESS-EEEEEEEECCSS-----CCEEEEEEC
T ss_pred CCEEEECCccCCeEEecCC-eEEEEEEecCCC-----eEEEEEEcC
Confidence 4478899999999999999 9999 5667664 455555554
No 30
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=44.46 E-value=9.8 Score=29.77 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=21.5
Q ss_pred cCCCCccEEEEEcCeecceEEEEeCCeEEEEEEcC
Q psy16971 235 TGHVGWGISWYINGLLIPEINVVRGKTYTFIVEGG 269 (383)
Q Consensus 235 Tg~~~~g~awyiN~~l~Pel~v~RG~tYtF~VegG 269 (383)
+|.|...|.||-||+.|.. +..|.+..+++
T Consensus 38 ~G~P~p~v~W~k~g~~l~~-----~~~~~~~~~~~ 67 (107)
T 3knb_B 38 LGEPPPVVVWEKGGQQLAA-----SERLSFPADGA 67 (107)
T ss_dssp EEESCCEEEEEETTEECCC-----CSSEECCEETT
T ss_pred EEecCCEEEEEECcccccc-----eeeEEEeecCc
Confidence 5678888999999998753 44566555543
No 31
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=43.27 E-value=14 Score=36.31 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=29.1
Q ss_pred EEEEEcCeecc-----eEEEEeCCeEEEEEE-cCCCCCCCCCcCCeEEe
Q psy16971 242 ISWYINGLLIP-----EINVVRGKTYTFIVE-GGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 242 ~awyiN~~l~P-----el~v~RG~tYtF~Ve-gG~dp~~~~~yHP~yIt 284 (383)
-.|-|||+..| .|.|++|++|.|++. +|. ...|||-|-
T Consensus 324 ~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~-----~~~h~~hlh 367 (447)
T 2dv6_A 324 EYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGP-----NFTSSFHVI 367 (447)
T ss_dssp SEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEES-----SCCEEEEEE
T ss_pred CEEEECCcccCCCCCcceEECCCCEEEEEEEeCCC-----CceEeEEEc
Confidence 47999999764 799999999999654 443 346788775
No 32
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=42.87 E-value=22 Score=35.45 Aligned_cols=66 Identities=17% Similarity=0.336 Sum_probs=40.3
Q ss_pred EEEEEcCeecceEEEEeCCeEEE-EEEcCCCCCCC-C--CcCCeEEecCCCCCccCCChhhhcceEEEeCccc
Q psy16971 242 ISWYINGLLIPEINVVRGKTYTF-IVEGGLDPNTP-A--KYHPFYITDDSVGGYQHKTPEEKEKVRIFAGAKR 310 (383)
Q Consensus 242 ~awyiN~~l~Pel~v~RG~tYtF-~VegG~dp~~~-~--~yHP~yItd~~~GG~~~~~~~~~~~~~v~aG~~~ 310 (383)
-++-|||+..|.|.|++| +|.| +|.+|++.... . --|+|++.-. .|++-. .+.+...+.|..|-.+
T Consensus 183 d~~liNG~~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~-DG~~~~-~P~~~~~l~l~pgeR~ 252 (451)
T 2uxt_A 183 DTLLVNGVQSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISG-DQGFLP-APVSVKQLSLAPGERR 252 (451)
T ss_dssp SEEEETTEESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEEC-SSSEEE-EEEEESSEEECTTCEE
T ss_pred CEEEECCcccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEe-CCCccC-CceEeceEEECceeEE
Confidence 488999999999999999 9999 56676653111 0 1366665442 466531 1233344555555443
No 33
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=42.05 E-value=21 Score=33.40 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=28.7
Q ss_pred EEEEcCeec----ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 243 SWYINGLLI----PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 243 awyiN~~l~----Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
.|-|||+.- +.|.|+.|.+|.|.+..... ....|||-|-
T Consensus 182 ~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~---~~~~H~fHlh 224 (288)
T 3gdc_A 182 FYSVNGLPFHFMDFPVKVKQHELVRIHLINVLE---YDPINSFHIH 224 (288)
T ss_dssp EEEETTSTTHHHHSCEEEETTCCEEEEEEECCC---SSSEEEEEET
T ss_pred eEEECcccccccCcccccCCCCEEEEEEEeCCC---CCcceeEEEc
Confidence 799999965 36999999999996655321 1246888773
No 34
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=41.65 E-value=20 Score=35.31 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=28.6
Q ss_pred EEEEcCeec-----ceEEEEeCCeEEEEE-EcCCCCCCCCCcCCeEEe
Q psy16971 243 SWYINGLLI-----PEINVVRGKTYTFIV-EGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 243 awyiN~~l~-----Pel~v~RG~tYtF~V-egG~dp~~~~~yHP~yIt 284 (383)
.+-|||+.- |+|.|+.|++|.|++ .+|.+ ..|+|.|-
T Consensus 190 ~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~-----~~~~~~i~ 232 (442)
T 2zoo_A 190 YVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPN-----LVSSFHVI 232 (442)
T ss_dssp EEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESS-----CCEEEEEE
T ss_pred EEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCC-----CceeeEEc
Confidence 677999975 689999999999965 44443 46888774
No 35
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=39.60 E-value=23 Score=36.21 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=26.5
Q ss_pred EEEEEcCeecceEEEEeCCeEEE-EEEcCCCC
Q psy16971 242 ISWYINGLLIPEINVVRGKTYTF-IVEGGLDP 272 (383)
Q Consensus 242 ~awyiN~~l~Pel~v~RG~tYtF-~VegG~dp 272 (383)
-+.-|||+..|.|.|++|++|.| +|.+|++.
T Consensus 168 d~~liNG~~~~~~~v~~g~~~RlRliNa~~~~ 199 (534)
T 1zpu_A 168 QNLIVNNTMNLTWEVQPDTTYLLRIVNVGGFV 199 (534)
T ss_dssp SEEEETTBSSCEEECCSSCEEEEEEEECCSSC
T ss_pred ceEEECCCCceEEEEECCCEEEEEEEeccCCc
Confidence 37889999999999999999999 56676653
No 36
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=37.45 E-value=37 Score=25.89 Aligned_cols=27 Identities=7% Similarity=0.214 Sum_probs=20.8
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
++|.|+.|.|++|.-.+ ..-|.|.|.+
T Consensus 19 ~~i~v~~G~~V~~~n~~-------~~~H~~~~~~ 45 (98)
T 1pcs_A 19 STVTIKAGEEVKWVNNK-------LSPHNIVFDA 45 (98)
T ss_dssp SEEEECTTCEEEEEECS-------SCCEEEEECC
T ss_pred CEEEECCCCEEEEEECC-------CCCcEEEEeC
Confidence 58999999999998432 1349998865
No 37
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=36.99 E-value=1.1e+02 Score=25.76 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=21.4
Q ss_pred eEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 253 EINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 253 el~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
+|.|..|.+.+|++..-+ --|-|.|-
T Consensus 61 ~l~Vp~G~~V~~~vts~D------V~Hsf~ip 86 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD------VIHGFHVE 86 (135)
T ss_dssp SEEEETTSEEEEEEEBSS------SCEEEEET
T ss_pred EEEEcCCCEEEEEEEeCC------ccceEEec
Confidence 899999999999998743 35888874
No 38
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=36.71 E-value=28 Score=35.39 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=29.8
Q ss_pred EEEEcCeec----ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 243 SWYINGLLI----PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 243 awyiN~~l~----Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
.|.|||+.- |.+.|++|.++.+.+.... .--|||.|-
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~-----~~~Hp~HlH 412 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKS-----HMDHPFHIH 412 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECS-----SSCEEEEET
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCC-----CCceeEEEe
Confidence 499999864 6799999999999988632 346999874
No 39
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=36.04 E-value=34 Score=33.49 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=24.5
Q ss_pred EEEEEcCee-cceEEEEeCCeEEEEEEcCC
Q psy16971 242 ISWYINGLL-IPEINVVRGKTYTFIVEGGL 270 (383)
Q Consensus 242 ~awyiN~~l-~Pel~v~RG~tYtF~VegG~ 270 (383)
-+|-|||+. -|.|.|++|.+|.+++.-..
T Consensus 184 ~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~ 213 (447)
T 2dv6_A 184 TYWTFNGKVPGPFLRVRVGDTVELHLKNHK 213 (447)
T ss_dssp EEEEETTBBSCCCEEEETTCEEEEEEEECT
T ss_pred EEEEECCccCCCeEEecCCCEEEEEEEeCC
Confidence 479999986 79999999999999766543
No 40
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=35.95 E-value=49 Score=25.12 Aligned_cols=27 Identities=15% Similarity=0.257 Sum_probs=20.5
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
++|.|+.|.|.+|.-.+ . .-|.|.|.+
T Consensus 18 ~~i~v~~G~~V~~~n~~-~------~~H~~~~~~ 44 (98)
T 2plt_A 18 KTLTIKSGETVNFVNNA-G------FPHNIVFDE 44 (98)
T ss_dssp SEEEECTTCEEEEEECS-S------CCEEEEECG
T ss_pred CEEEECCCCEEEEEECC-C------CceEEEEeC
Confidence 58999999999995433 1 349998865
No 41
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=35.82 E-value=28 Score=38.77 Aligned_cols=77 Identities=12% Similarity=0.203 Sum_probs=46.1
Q ss_pred ccEEEEEcCee---cceEEEEeCCeEEEEEEc-CCCCCCCCCcCCeEEecCCCCCccCCChhhhcceEEEeCcccCCCCc
Q psy16971 240 WGISWYINGLL---IPEINVVRGKTYTFIVEG-GLDPNTPAKYHPFYITDDSVGGYQHKTPEEKEKVRIFAGAKRDKFGN 315 (383)
Q Consensus 240 ~g~awyiN~~l---~Pel~v~RG~tYtF~Veg-G~dp~~~~~yHP~yItd~~~GG~~~~~~~~~~~~~v~aG~~~~~~g~ 315 (383)
++..|-|||+. .|.|.|++|++|.|++-. |.. ...|+|.|- |--=+........+.|..|-.+ +-.
T Consensus 256 ~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~----~~~~~~~i~----Gh~f~v~p~~~dtv~I~pGer~--dVl 325 (1065)
T 2j5w_A 256 SNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNE----VDVHAAFFH----GQALTNKNYRIDTINLFPATLF--DAY 325 (1065)
T ss_dssp HTEEEEETTEETTCCCCCEEETTCEEEEEEEECSST----TCCEEEEET----TCCEEETTEEESEEEECBTCEE--EEE
T ss_pred cCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcc----cceeEEEEc----CCEEEECCeeecEEEECCCcEE--EEE
Confidence 55689999998 689999999999996654 432 135777772 1111111123444556666554 333
Q ss_pred ccccccccccc
Q psy16971 316 VVPTGVGRLCN 326 (383)
Q Consensus 316 ~~pt~~gr~c~ 326 (383)
+.+...|.|..
T Consensus 326 v~~~~pG~y~i 336 (1065)
T 2j5w_A 326 MVAQNPGEWML 336 (1065)
T ss_dssp EECCSCEEEEE
T ss_pred EEeCCCeeEEE
Confidence 44445566554
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=35.76 E-value=29 Score=33.15 Aligned_cols=28 Identities=25% Similarity=0.223 Sum_probs=23.9
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcC
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGG 269 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG 269 (383)
-+|-|||+ .-|.|.|++|.++.++|.=.
T Consensus 24 ~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~ 52 (339)
T 2zwn_A 24 KVFGFNGQVPGPLIHVQEGDDVIVNVTNN 52 (339)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEEE
T ss_pred EEEEECCccCCCeEEEECCCEEEEEEEEC
Confidence 38999999 59999999999999966543
No 43
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=35.19 E-value=47 Score=25.43 Aligned_cols=26 Identities=23% Similarity=0.243 Sum_probs=19.3
Q ss_pred CCCCeeEEEcCCCCCCCeeEEccccCC
Q psy16971 355 HGEPGVIQWTPDANTPDTVYYQTPEPS 381 (383)
Q Consensus 355 ~g~p~~l~wtp~~~tPd~vYYq~~th~ 381 (383)
+|+...++|+.+ +.|-+..|+|-.|.
T Consensus 68 pG~~~~~~f~~~-~~~G~y~y~C~~H~ 93 (105)
T 3cvb_A 68 PGESYEITFSSD-FPAGTYTYYCAPHR 93 (105)
T ss_dssp TTCEEEEEECTT-SCSEEEEEECTTTG
T ss_pred CCCeEEEEEecC-CCCeeEEEEeCCch
Confidence 466667777754 46888999998885
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=34.75 E-value=25 Score=33.25 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=26.2
Q ss_pred EEEcCee---cceEEEEeCCeEEEEEEc-CCCCCCCCCcCCeEE
Q psy16971 244 WYINGLL---IPEINVVRGKTYTFIVEG-GLDPNTPAKYHPFYI 283 (383)
Q Consensus 244 wyiN~~l---~Pel~v~RG~tYtF~Veg-G~dp~~~~~yHP~yI 283 (383)
|+|||+. .|.|.++.|.+|.|++.. |+ ..|||-|
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~------~~hpfHl 200 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGE------YYHTFHL 200 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS------CCEEEEE
T ss_pred hhcccCCcccccccccccCCEEEEEEecccc------cceeeee
Confidence 7899874 688999999999996554 43 3577766
No 45
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=33.72 E-value=54 Score=33.27 Aligned_cols=30 Identities=30% Similarity=0.553 Sum_probs=25.4
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcCCC
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGGLD 271 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG~d 271 (383)
-+|-+||. .-|.|.+++|.+....|.=.-+
T Consensus 71 ~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~ 101 (481)
T 3zx1_A 71 LFYTYNGLVPAPKIEVFEGDKLEILVKNKLK 101 (481)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECSS
T ss_pred EEEEECCCCCCceEEEECCcEEEEEEEeCCC
Confidence 48999998 4899999999999998876543
No 46
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=33.70 E-value=35 Score=34.73 Aligned_cols=30 Identities=40% Similarity=0.516 Sum_probs=24.9
Q ss_pred EEEEcCeec----------ceEEEEeCCeEEE-EEEcCCCC
Q psy16971 243 SWYINGLLI----------PEINVVRGKTYTF-IVEGGLDP 272 (383)
Q Consensus 243 awyiN~~l~----------Pel~v~RG~tYtF-~VegG~dp 272 (383)
+.-|||+.. |.|.|++|++|.| +|.+|++.
T Consensus 193 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~ 233 (521)
T 1v10_A 193 TTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFP 233 (521)
T ss_dssp EEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSC
T ss_pred EEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcc
Confidence 678999876 9999999999999 56666653
No 47
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=32.23 E-value=23 Score=29.48 Aligned_cols=20 Identities=25% Similarity=0.640 Sum_probs=17.3
Q ss_pred ccCCCCccEEEEEcCeecce
Q psy16971 234 ITGHVGWGISWYINGLLIPE 253 (383)
Q Consensus 234 iTg~~~~g~awyiN~~l~Pe 253 (383)
.+|.|-+.|.|+-||+.|.+
T Consensus 24 v~G~P~P~I~W~knG~~l~~ 43 (126)
T 1he7_A 24 VDGQPAPSLRWLFNGSVLNE 43 (126)
T ss_dssp ECCSSCCEEEEEETTEECCC
T ss_pred EeeeCCCeEEEEECCEECCC
Confidence 35889999999999998864
No 48
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=31.80 E-value=39 Score=34.13 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=24.8
Q ss_pred EEEEcCeec---------ceEEEEeCCeEEE-EEEcCCCC
Q psy16971 243 SWYINGLLI---------PEINVVRGKTYTF-IVEGGLDP 272 (383)
Q Consensus 243 awyiN~~l~---------Pel~v~RG~tYtF-~VegG~dp 272 (383)
+.-|||+.. |.|.|++|++|.| +|.+|++.
T Consensus 167 ~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~ 206 (503)
T 1hfu_A 167 ATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDP 206 (503)
T ss_dssp EEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSC
T ss_pred EEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcc
Confidence 677999877 9999999999999 56666643
No 49
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=31.24 E-value=1.1e+02 Score=30.16 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=24.5
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcCC
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGGL 270 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG~ 270 (383)
-+|-+||+ +-|.|.+++|.+....|.=..
T Consensus 36 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l 65 (439)
T 2xu9_A 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRL 65 (439)
T ss_dssp EEEEETTBSSCCEEEECTTCEEEEEEEECS
T ss_pred EEEEECCcccCCEEEEeCCCEEEEEEEECC
Confidence 48999996 589999999999998876543
No 50
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=30.61 E-value=33 Score=26.04 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=18.4
Q ss_pred CCccEEEEEcCeecceEEEEeCCeEEEEEEcC
Q psy16971 238 VGWGISWYINGLLIPEINVVRGKTYTFIVEGG 269 (383)
Q Consensus 238 ~~~g~awyiN~~l~Pel~v~RG~tYtF~VegG 269 (383)
|...+.||-||+.|.. +..|.+..+|+
T Consensus 33 p~~~v~W~k~g~~i~~-----~~~~~i~~~~~ 59 (91)
T 2lvc_A 33 EDAPVRWYKDGQEVEE-----SDFVVLENEGP 59 (91)
T ss_dssp TTSCCEEEETTSCCCC-----CSSCEEEEETT
T ss_pred CCcEEEEEECCEEeee-----eeeeeEEecCC
Confidence 3345799999998743 55666666654
No 51
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=30.19 E-value=1.4e+02 Score=22.95 Aligned_cols=25 Identities=16% Similarity=0.070 Sum_probs=18.9
Q ss_pred CCCCeeEEEcCCCCCCCeeEEccccCC
Q psy16971 355 HGEPGVIQWTPDANTPDTVYYQTPEPS 381 (383)
Q Consensus 355 ~g~p~~l~wtp~~~tPd~vYYq~~th~ 381 (383)
+|+...+.||+ +.|-+..|.|--|.
T Consensus 65 pg~~~~~~~t~--~~~G~Y~y~C~~H~ 89 (100)
T 4hci_A 65 SGKEKNITVKP--KSAGTYELICRYHL 89 (100)
T ss_dssp TTCEEEEEECC--CSCEEEEEECTTTG
T ss_pred CCcceeEEEec--ccCceEEEECcccc
Confidence 35567788887 56888899998883
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=29.88 E-value=90 Score=29.35 Aligned_cols=40 Identities=20% Similarity=0.121 Sum_probs=29.3
Q ss_pred EEEEEcCe-ecceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEe
Q psy16971 242 ISWYINGL-LIPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYIT 284 (383)
Q Consensus 242 ~awyiN~~-l~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yIt 284 (383)
-+|-|||+ .-|.|.|++|.+..+.|.-.. .....|.+-+-
T Consensus 54 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h 94 (336)
T 1oe1_A 54 QAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFH 94 (336)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEET
T ss_pred EEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceEC
Confidence 48999998 589999999999999876532 11245665543
No 53
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=29.38 E-value=5.9 Score=37.48 Aligned_cols=37 Identities=16% Similarity=0.389 Sum_probs=0.0
Q ss_pred EEEEcCeec---ceEEEEeCCeEEE-EEEcCCCCCCCCCcCCeEE
Q psy16971 243 SWYINGLLI---PEINVVRGKTYTF-IVEGGLDPNTPAKYHPFYI 283 (383)
Q Consensus 243 awyiN~~l~---Pel~v~RG~tYtF-~VegG~dp~~~~~yHP~yI 283 (383)
.|-|||+.- |.|.|++|.+|.| ++.+|... ..|||-|
T Consensus 203 ~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~----~~h~~hl 243 (306)
T 1sdd_A 203 MYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGP----ELFSIHF 243 (306)
T ss_dssp EECSSSCCSSCCCCCCCCCC------BBCCCSSS----CEECCBC
T ss_pred ceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCC----ccEEEEE
No 54
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=29.22 E-value=43 Score=25.47 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=21.7
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEecC
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITDD 286 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd~ 286 (383)
++|.|+.|.|.+|.-.+ ..-|.|.|.+.
T Consensus 19 ~~i~v~~G~~V~~~n~~-------~~~H~~~~~~~ 46 (97)
T 1b3i_A 19 KALSISAGDTVEFVMNK-------VGPHNVIFDKV 46 (97)
T ss_dssp SEEEECTTCEEEEEECS-------SCCCCBEEEEC
T ss_pred CEEEECCCCEEEEEECC-------CCCeEEEEeCC
Confidence 58999999999998433 13599988764
No 55
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=28.84 E-value=26 Score=26.67 Aligned_cols=20 Identities=25% Similarity=0.712 Sum_probs=16.8
Q ss_pred ccCCCCccEEEEEcCeecce
Q psy16971 234 ITGHVGWGISWYINGLLIPE 253 (383)
Q Consensus 234 iTg~~~~g~awyiN~~l~Pe 253 (383)
++|.|.+.+.|+-||+.+.+
T Consensus 25 v~G~P~P~i~W~k~g~~l~~ 44 (103)
T 1wwb_X 25 VKGNPKPALQWFYNGAILNE 44 (103)
T ss_dssp EECSSCCEEEEEETTEEECC
T ss_pred EEEeCCCEEEEEECCEECCC
Confidence 46889999999999998653
No 56
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=28.02 E-value=50 Score=34.34 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.6
Q ss_pred cEEEEEcCeec--ceEEEEeCCeEEEEEE-cCC
Q psy16971 241 GISWYINGLLI--PEINVVRGKTYTFIVE-GGL 270 (383)
Q Consensus 241 g~awyiN~~l~--Pel~v~RG~tYtF~Ve-gG~ 270 (383)
+-.|-|||+.- |.|.|+.|.+|.|++- +|+
T Consensus 226 ~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~ 258 (647)
T 1sdd_B 226 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGG 258 (647)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCC
T ss_pred CceeccCCEecCCCCeEEcCCCEEEEEEEeCCC
Confidence 45789999974 9999999999999664 454
No 57
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=27.45 E-value=1.1e+02 Score=24.96 Aligned_cols=30 Identities=3% Similarity=0.030 Sum_probs=23.2
Q ss_pred ceEEEEeCCeEEEEEEc-CCCCCCCCCcCCeEEec
Q psy16971 252 PEINVVRGKTYTFIVEG-GLDPNTPAKYHPFYITD 285 (383)
Q Consensus 252 Pel~v~RG~tYtF~Veg-G~dp~~~~~yHP~yItd 285 (383)
++|.|+.|.|++|.+.- +++ ..-|.|.|..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~----~~~H~~~~~~ 63 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNL----GVQHNWVLVN 63 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSS----CCCBCCEEES
T ss_pred CeEEECCCCEEEEEEECCCCC----CCceeEEEec
Confidence 69999999999998865 122 2569999874
No 58
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=26.05 E-value=98 Score=23.51 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=20.4
Q ss_pred ceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 252 PEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 252 Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
++|.|+.|.|++|.-.++ .-|-|.|.+
T Consensus 17 ~~i~v~~G~tV~~~n~~~-------~~H~v~~~~ 43 (99)
T 1plc_A 17 SEFSISPGEKIVFKNNAG-------FPHNIVFDE 43 (99)
T ss_dssp SEEEECTTCEEEEEECSS-------CCBCCEECT
T ss_pred CEEEECCCCEEEEEECCC-------CceEEEEeC
Confidence 589999999999954331 348888765
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=24.82 E-value=62 Score=32.92 Aligned_cols=43 Identities=33% Similarity=0.441 Sum_probs=29.2
Q ss_pred EEEEEcCee---------cceEEEEeCCeEEE-EEEcCCCCCCC--CCcCCeEEe
Q psy16971 242 ISWYINGLL---------IPEINVVRGKTYTF-IVEGGLDPNTP--AKYHPFYIT 284 (383)
Q Consensus 242 ~awyiN~~l---------~Pel~v~RG~tYtF-~VegG~dp~~~--~~yHP~yIt 284 (383)
=+.-|||+- .|.|.|++|++|.| +|.+|.+.... =--|+|.|.
T Consensus 167 d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 221 (499)
T 3pxl_A 167 DATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII 221 (499)
T ss_dssp SEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred cEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE
Confidence 367899873 47999999999999 56666654210 013676654
No 60
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=24.77 E-value=56 Score=31.70 Aligned_cols=12 Identities=17% Similarity=0.512 Sum_probs=10.1
Q ss_pred ccEEEEEcCeec
Q psy16971 240 WGISWYINGLLI 251 (383)
Q Consensus 240 ~g~awyiN~~l~ 251 (383)
-.|.|||+|+++
T Consensus 251 ~~I~~yVDg~~~ 262 (324)
T 4awd_A 251 NTVKFYYDGKYM 262 (324)
T ss_dssp TEEEEEETTEEE
T ss_pred CeEEEEECCEEE
Confidence 368999999985
No 61
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=23.65 E-value=1.5e+02 Score=24.54 Aligned_cols=17 Identities=29% Similarity=0.450 Sum_probs=15.3
Q ss_pred ceEEEEeCCeEEEEEEc
Q psy16971 252 PEINVVRGKTYTFIVEG 268 (383)
Q Consensus 252 Pel~v~RG~tYtF~Veg 268 (383)
++|.|+.|-|.+|....
T Consensus 23 ~~i~V~~GDtVtf~n~~ 39 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD 39 (127)
T ss_dssp SEEEECTTCEEEEECSS
T ss_pred CEEEECCCCEEEEEECC
Confidence 69999999999999864
No 62
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=22.57 E-value=68 Score=29.40 Aligned_cols=12 Identities=25% Similarity=0.684 Sum_probs=10.2
Q ss_pred ccEEEEEcCeec
Q psy16971 240 WGISWYINGLLI 251 (383)
Q Consensus 240 ~g~awyiN~~l~ 251 (383)
-.|.|||+|+++
T Consensus 177 ~~I~~yVDg~~~ 188 (251)
T 3iln_A 177 EEIRWFVDDSLY 188 (251)
T ss_dssp SEEEEEETTEEE
T ss_pred CEEEEEECCEEE
Confidence 368999999985
No 63
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=22.49 E-value=73 Score=32.30 Aligned_cols=42 Identities=36% Similarity=0.427 Sum_probs=28.7
Q ss_pred EEEEcCee----------cceEEEEeCCeEEE-EEEcCCCCCCC--CCcCCeEEe
Q psy16971 243 SWYINGLL----------IPEINVVRGKTYTF-IVEGGLDPNTP--AKYHPFYIT 284 (383)
Q Consensus 243 awyiN~~l----------~Pel~v~RG~tYtF-~VegG~dp~~~--~~yHP~yIt 284 (383)
+.-|||+- .|.|.|++|++|.| +|.+|.+.... =--|+|.|.
T Consensus 170 ~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~vi 224 (495)
T 3t6v_A 170 STLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTII 224 (495)
T ss_dssp EEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE
T ss_pred EEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE
Confidence 78889873 47999999999999 56666654210 014777654
No 64
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=22.27 E-value=82 Score=24.20 Aligned_cols=35 Identities=11% Similarity=-0.023 Sum_probs=20.0
Q ss_pred EEeCCeEEEEEEcCCCCCCCCCcCCeEEecCCCCC
Q psy16971 256 VVRGKTYTFIVEGGLDPNTPAKYHPFYITDDSVGG 290 (383)
Q Consensus 256 v~RG~tYtF~VegG~dp~~~~~yHP~yItd~~~GG 290 (383)
|+.|.+|.|.|.+=+.--....-.++.++..++.|
T Consensus 69 L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~g 103 (107)
T 1x5a_A 69 LQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSG 103 (107)
T ss_dssp CCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSC
T ss_pred CCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCC
Confidence 45678899999984433222233455555544433
No 65
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=21.41 E-value=3.5e+02 Score=28.44 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=29.9
Q ss_pred EEEEcCee-cceEEEEeCCeEEEEEEcCCCCCCCCCcCCeEEec
Q psy16971 243 SWYINGLL-IPEINVVRGKTYTFIVEGGLDPNTPAKYHPFYITD 285 (383)
Q Consensus 243 awyiN~~l-~Pel~v~RG~tYtF~VegG~dp~~~~~yHP~yItd 285 (383)
+|-+|+.. -|+|.|+.|.+.+|.+.--.+ .+..-|-|.|..
T Consensus 503 m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~--~~Dv~Hgf~ip~ 544 (595)
T 1fwx_A 503 MSSVAPSFSIESFTVKEGDEVTVIVTNLDE--IDDLTHGFTMGN 544 (595)
T ss_dssp EEEETTEESCSEEEEETTCEEEEEEEECCC--STTCCEEEEETT
T ss_pred EEEecCcccCCEEEEECCCEEEEEEEeCCC--CCCceeeEEecC
Confidence 67788875 479999999999999876432 122358887743
No 66
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=21.41 E-value=35 Score=26.02 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=15.4
Q ss_pred cCCCCccEEEEEcCeecc
Q psy16971 235 TGHVGWGISWYINGLLIP 252 (383)
Q Consensus 235 Tg~~~~g~awyiN~~l~P 252 (383)
+|.|...+.||-||+.+.
T Consensus 30 ~g~P~p~v~W~k~g~~i~ 47 (100)
T 3knb_A 30 TGEPTPEVTWSCGGRKIH 47 (100)
T ss_dssp EEESCCEEEEEETTEECC
T ss_pred EEecCCEEEEEECceEee
Confidence 577888999999999874
No 67
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans}
Probab=21.29 E-value=61 Score=30.59 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.2
Q ss_pred ccEEEEEcCeec
Q psy16971 240 WGISWYINGLLI 251 (383)
Q Consensus 240 ~g~awyiN~~l~ 251 (383)
-.|.|||+|+++
T Consensus 212 ~~I~~yVDG~~~ 223 (280)
T 3juu_A 212 DEIIFFLDGKMQ 223 (280)
T ss_dssp TEEEEEETTEEE
T ss_pred CeEEEEECCEEE
Confidence 368999999985
No 68
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=20.77 E-value=96 Score=29.93 Aligned_cols=11 Identities=36% Similarity=1.065 Sum_probs=10.0
Q ss_pred cEEEEEcCeec
Q psy16971 241 GISWYINGLLI 251 (383)
Q Consensus 241 g~awyiN~~l~ 251 (383)
.|.|||||+++
T Consensus 210 ~I~~yVDg~~~ 220 (308)
T 4atf_A 210 HLEYYIDGVLV 220 (308)
T ss_dssp EEEEEETTEEE
T ss_pred eEEEEECCEEE
Confidence 79999999995
No 69
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=20.14 E-value=1.3e+02 Score=21.68 Aligned_cols=18 Identities=33% Similarity=0.606 Sum_probs=14.6
Q ss_pred CCCCccEEEEEcCeecce
Q psy16971 236 GHVGWGISWYINGLLIPE 253 (383)
Q Consensus 236 g~~~~g~awyiN~~l~Pe 253 (383)
|.|...+.||-||..+..
T Consensus 31 g~p~p~v~W~k~g~~~~~ 48 (99)
T 1g1c_A 31 GKPDPECEWYKNGVKIER 48 (99)
T ss_dssp EESCCEEEEEETTEECCC
T ss_pred EeCCCEEEEEECCEECCC
Confidence 567778999999998753
No 70
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=20.12 E-value=1e+02 Score=31.58 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=29.6
Q ss_pred EEEEEcCee---------cceEEEEeCCeEEE-EEEcCCCCCCC--CCcCCeEEe
Q psy16971 242 ISWYINGLL---------IPEINVVRGKTYTF-IVEGGLDPNTP--AKYHPFYIT 284 (383)
Q Consensus 242 ~awyiN~~l---------~Pel~v~RG~tYtF-~VegG~dp~~~--~~yHP~yIt 284 (383)
-+.-|||+. .|.|.|+.|++|.| +|.+|.+.... =--|+|.+.
T Consensus 196 d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi 250 (559)
T 2q9o_A 196 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVI 250 (559)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred ceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEE
Confidence 367799997 36899999999999 56777654210 013777653
Done!