Query psy16975
Match_columns 728
No_of_seqs 577 out of 2835
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:30:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g3e_A D-amino-acid oxidase; F 100.0 6.8E-37 2.3E-41 330.5 4.2 327 251-722 1-337 (351)
2 1c0p_A D-amino acid oxidase; a 100.0 6.6E-34 2.3E-38 308.5 5.2 343 247-721 3-360 (363)
3 3dme_A Conserved exported prot 100.0 1.5E-33 5E-38 303.3 0.6 300 248-603 2-320 (369)
4 1y56_B Sarcosine oxidase; dehy 100.0 1.3E-33 4.5E-38 307.3 -2.1 332 247-718 2-355 (382)
5 3nyc_A D-arginine dehydrogenas 100.0 4.9E-33 1.7E-37 301.3 1.0 332 248-718 7-358 (381)
6 3pvc_A TRNA 5-methylaminomethy 100.0 1.7E-32 5.9E-37 323.4 0.0 342 182-604 206-576 (689)
7 3ps9_A TRNA 5-methylaminomethy 100.0 1.2E-31 4.2E-36 315.4 1.6 405 182-718 214-645 (676)
8 2gf3_A MSOX, monomeric sarcosi 100.0 2E-31 6.8E-36 290.2 0.9 335 250-718 3-364 (389)
9 3axb_A Putative oxidoreductase 100.0 3E-31 1E-35 295.9 2.0 343 249-718 22-418 (448)
10 1ryi_A Glycine oxidase; flavop 100.0 2.8E-31 9.7E-36 288.6 0.4 336 247-718 14-362 (382)
11 2gag_B Heterotetrameric sarcos 100.0 2.5E-30 8.6E-35 283.0 0.7 333 247-718 18-375 (405)
12 2uzz_A N-methyl-L-tryptophan o 99.9 7.9E-30 2.7E-34 276.2 0.6 332 250-718 2-357 (372)
13 3c4n_A Uncharacterized protein 99.9 6E-28 2.1E-32 266.7 4.6 323 249-718 35-397 (405)
14 2oln_A NIKD protein; flavoprot 99.9 1.1E-27 3.8E-32 262.4 1.5 295 248-604 2-330 (397)
15 1pj5_A N,N-dimethylglycine oxi 99.9 8.8E-27 3E-31 280.1 3.1 300 248-604 2-340 (830)
16 2qcu_A Aerobic glycerol-3-phos 99.9 1.1E-26 3.7E-31 264.1 3.0 298 249-604 2-322 (501)
17 3dje_A Fructosyl amine: oxygen 99.9 4.4E-26 1.5E-30 253.2 6.9 335 247-719 3-385 (438)
18 2rgh_A Alpha-glycerophosphate 99.9 9.4E-27 3.2E-31 268.9 1.1 303 249-604 31-365 (571)
19 3da1_A Glycerol-3-phosphate de 99.9 4.8E-25 1.7E-29 254.1 1.5 302 248-604 16-345 (561)
20 3cgv_A Geranylgeranyl reductas 98.9 6.1E-10 2.1E-14 120.7 3.1 262 249-602 3-268 (397)
21 3nix_A Flavoprotein/dehydrogen 98.8 5.9E-10 2E-14 122.2 0.3 37 249-287 4-40 (421)
22 3oz2_A Digeranylgeranylglycero 98.6 6.9E-09 2.4E-13 111.5 0.1 36 248-285 2-37 (397)
23 1qo8_A Flavocytochrome C3 fuma 98.5 6.2E-10 2.1E-14 128.1 -10.8 72 227-300 98-169 (566)
24 3v76_A Flavoprotein; structura 98.4 5.7E-09 2E-13 115.8 -4.8 40 246-287 23-62 (417)
25 1y0p_A Fumarate reductase flav 98.3 2.2E-08 7.4E-13 115.3 -5.5 50 249-300 125-174 (571)
26 3kkj_A Amine oxidase, flavin-c 98.2 4.2E-07 1.4E-11 89.5 3.4 35 249-285 1-35 (336)
27 2gqf_A Hypothetical protein HI 98.2 4.2E-08 1.4E-12 108.1 -4.3 36 248-285 2-37 (401)
28 2i0z_A NAD(FAD)-utilizing dehy 98.2 9.8E-08 3.4E-12 106.4 -1.6 38 248-287 24-61 (447)
29 3fmw_A Oxygenase; mithramycin, 98.2 7.1E-07 2.4E-11 102.8 3.9 36 249-286 48-83 (570)
30 1chu_A Protein (L-aspartate ox 98.1 3.5E-07 1.2E-11 104.7 0.4 49 249-300 7-55 (540)
31 4at0_A 3-ketosteroid-delta4-5a 97.9 4E-06 1.4E-10 95.0 3.5 50 248-299 39-88 (510)
32 4gde_A UDP-galactopyranose mut 97.8 5.8E-06 2E-10 92.6 2.7 40 248-288 8-48 (513)
33 4fk1_A Putative thioredoxin re 97.8 1.1E-05 3.7E-10 84.6 4.6 38 248-287 4-41 (304)
34 3k7m_X 6-hydroxy-L-nicotine ox 97.8 7.8E-06 2.7E-10 89.7 3.4 39 251-291 2-41 (431)
35 4gcm_A TRXR, thioredoxin reduc 97.8 1.1E-05 3.8E-10 84.6 3.8 39 247-287 3-41 (312)
36 3ka7_A Oxidoreductase; structu 97.8 1.1E-05 3.8E-10 88.2 3.9 34 251-286 1-34 (425)
37 2bs2_A Quinol-fumarate reducta 97.8 8.4E-06 2.9E-10 95.4 3.1 50 249-300 4-54 (660)
38 1yvv_A Amine oxidase, flavin-c 97.7 1.2E-05 4E-10 84.8 3.5 34 250-285 2-35 (336)
39 3i6d_A Protoporphyrinogen oxid 97.7 8.2E-06 2.8E-10 90.1 2.0 38 249-288 4-48 (470)
40 4a5l_A Thioredoxin reductase; 97.7 1.5E-05 5E-10 83.3 3.7 39 247-287 1-39 (314)
41 1rp0_A ARA6, thiazole biosynth 97.7 1.8E-05 6.2E-10 82.6 4.3 38 249-288 38-76 (284)
42 3nks_A Protoporphyrinogen oxid 97.7 1.5E-05 5.3E-10 88.5 3.8 39 250-290 2-43 (477)
43 2wdq_A Succinate dehydrogenase 97.7 1.4E-05 4.7E-10 92.4 3.3 49 249-299 6-55 (588)
44 3atr_A Conserved archaeal prot 97.7 1.3E-05 4.5E-10 89.1 3.0 38 247-286 3-40 (453)
45 4dgk_A Phytoene dehydrogenase; 97.7 1.3E-05 4.5E-10 89.7 3.0 34 251-286 2-35 (501)
46 3lov_A Protoporphyrinogen oxid 97.7 1.5E-05 5.3E-10 88.6 3.3 46 250-297 4-53 (475)
47 3nrn_A Uncharacterized protein 97.7 1.9E-05 6.3E-10 86.7 3.8 33 251-285 1-33 (421)
48 2h88_A Succinate dehydrogenase 97.7 1.5E-05 5.2E-10 92.7 3.1 51 248-300 16-67 (621)
49 1k0i_A P-hydroxybenzoate hydro 97.6 1.2E-05 4.2E-10 87.1 1.5 35 250-286 2-36 (394)
50 3itj_A Thioredoxin reductase 1 97.6 2.4E-05 8.2E-10 82.1 3.6 49 247-300 19-67 (338)
51 2bcg_G Secretory pathway GDP d 97.6 2.8E-05 9.6E-10 86.7 3.7 37 247-285 8-44 (453)
52 3rp8_A Flavoprotein monooxygen 97.6 2.6E-05 9E-10 85.0 3.3 37 247-285 20-56 (407)
53 2aqj_A Tryptophan halogenase, 97.6 3.3E-05 1.1E-09 87.9 4.1 40 249-288 4-44 (538)
54 3i3l_A Alkylhalidase CMLS; fla 97.5 3.8E-05 1.3E-09 88.8 4.4 39 247-287 20-58 (591)
55 2e5v_A L-aspartate oxidase; ar 97.5 3.4E-05 1.1E-09 86.7 3.5 45 252-299 1-45 (472)
56 3c96_A Flavin-containing monoo 97.5 3.4E-05 1.2E-09 84.4 3.4 36 248-285 2-38 (410)
57 2jae_A L-amino acid oxidase; o 97.5 4.3E-05 1.5E-09 85.4 4.1 39 247-287 8-46 (489)
58 2vou_A 2,6-dihydroxypyridine h 97.5 3.7E-05 1.3E-09 83.7 3.4 36 248-285 3-38 (397)
59 2x3n_A Probable FAD-dependent 97.5 3.4E-05 1.2E-09 83.8 3.0 35 249-285 5-39 (399)
60 1s3e_A Amine oxidase [flavin-c 97.5 4.5E-05 1.5E-09 86.2 3.8 36 248-285 2-37 (520)
61 3ihg_A RDME; flavoenzyme, anth 97.5 5.5E-05 1.9E-09 85.9 4.5 37 248-286 3-39 (535)
62 3ihm_A Styrene monooxygenase A 97.5 5.2E-05 1.8E-09 83.9 4.1 37 249-287 21-57 (430)
63 3e1t_A Halogenase; flavoprotei 97.5 4.7E-05 1.6E-09 86.2 3.8 37 248-286 5-41 (512)
64 1rsg_A FMS1 protein; FAD bindi 97.5 4.2E-05 1.4E-09 86.5 3.3 36 248-285 6-42 (516)
65 3fpz_A Thiazole biosynthetic e 97.5 4.4E-05 1.5E-09 81.0 3.3 37 249-285 64-100 (326)
66 4hb9_A Similarities with proba 97.5 5.5E-05 1.9E-09 81.5 4.1 33 251-285 2-34 (412)
67 3gyx_A Adenylylsulfate reducta 97.5 4.1E-05 1.4E-09 89.7 3.0 45 249-295 21-71 (662)
68 3cty_A Thioredoxin reductase; 97.5 5.1E-05 1.8E-09 79.6 3.5 38 247-286 13-50 (319)
69 2yg5_A Putrescine oxidase; oxi 97.4 4.6E-05 1.6E-09 84.1 3.2 36 248-285 3-38 (453)
70 1kf6_A Fumarate reductase flav 97.4 3.6E-05 1.2E-09 89.2 2.5 50 249-300 4-56 (602)
71 2xdo_A TETX2 protein; tetracyc 97.4 5.2E-05 1.8E-09 82.6 3.5 36 248-285 24-59 (398)
72 3f8d_A Thioredoxin reductase ( 97.4 5.3E-05 1.8E-09 78.8 3.5 34 249-284 14-47 (323)
73 2zbw_A Thioredoxin reductase; 97.4 5E-05 1.7E-09 80.1 3.2 37 247-285 2-38 (335)
74 1v0j_A UDP-galactopyranose mut 97.4 4.4E-05 1.5E-09 83.7 2.9 40 247-288 4-45 (399)
75 3o0h_A Glutathione reductase; 97.4 5.3E-05 1.8E-09 85.0 3.6 38 249-288 25-62 (484)
76 3fbs_A Oxidoreductase; structu 97.4 7.7E-05 2.6E-09 76.7 4.5 35 250-286 2-36 (297)
77 2b9w_A Putative aminooxidase; 97.4 6.5E-05 2.2E-09 82.2 3.7 37 249-287 5-43 (424)
78 2cul_A Glucose-inhibited divis 97.4 6.4E-05 2.2E-09 75.9 3.3 35 249-285 2-36 (232)
79 3urh_A Dihydrolipoyl dehydroge 97.4 5.9E-05 2E-09 84.8 2.8 37 247-285 22-58 (491)
80 4dna_A Probable glutathione re 97.4 7.6E-05 2.6E-09 83.2 3.7 37 249-287 4-40 (463)
81 2weu_A Tryptophan 5-halogenase 97.4 5E-05 1.7E-09 85.6 2.2 38 250-287 2-40 (511)
82 3p1w_A Rabgdi protein; GDI RAB 97.4 5.2E-05 1.8E-09 85.3 2.2 48 247-296 17-65 (475)
83 1trb_A Thioredoxin reductase; 97.4 6.2E-05 2.1E-09 78.7 2.6 37 248-286 3-39 (320)
84 2e1m_A L-glutamate oxidase; L- 97.3 9.6E-05 3.3E-09 80.7 4.1 35 248-284 42-76 (376)
85 1sez_A Protoporphyrinogen oxid 97.3 8.3E-05 2.8E-09 83.3 3.5 38 247-286 10-47 (504)
86 3qj4_A Renalase; FAD/NAD(P)-bi 97.3 7.6E-05 2.6E-09 79.4 3.0 35 251-285 2-37 (342)
87 3alj_A 2-methyl-3-hydroxypyrid 97.3 7.8E-05 2.7E-09 80.5 3.1 36 249-286 10-45 (379)
88 4a9w_A Monooxygenase; baeyer-v 97.3 8.1E-05 2.8E-09 78.5 3.1 35 249-285 2-36 (357)
89 3jsk_A Cypbp37 protein; octame 97.3 0.0001 3.4E-09 79.5 3.8 39 249-287 78-116 (344)
90 2q7v_A Thioredoxin reductase; 97.3 9.5E-05 3.3E-09 77.7 3.6 36 248-285 6-41 (325)
91 2ivd_A PPO, PPOX, protoporphyr 97.3 9E-05 3.1E-09 82.4 3.5 36 248-285 14-49 (478)
92 2qa1_A PGAE, polyketide oxygen 97.3 0.0001 3.5E-09 83.3 3.5 37 247-285 8-44 (500)
93 2e4g_A Tryptophan halogenase; 97.3 0.00014 4.7E-09 83.2 4.5 39 248-286 23-62 (550)
94 3hdq_A UDP-galactopyranose mut 97.2 0.00013 4.5E-09 80.2 3.7 37 247-285 26-62 (397)
95 3ab1_A Ferredoxin--NADP reduct 97.2 0.00012 4E-09 78.3 3.2 37 247-285 11-47 (360)
96 2qa2_A CABE, polyketide oxygen 97.2 0.00016 5.3E-09 81.8 4.1 36 248-285 10-45 (499)
97 1vdc_A NTR, NADPH dependent th 97.2 9.7E-05 3.3E-09 77.7 2.2 34 248-283 6-39 (333)
98 2bi7_A UDP-galactopyranose mut 97.2 0.00015 5.2E-09 79.1 3.7 34 250-285 3-36 (384)
99 3d1c_A Flavin-containing putat 97.2 0.00014 4.8E-09 77.5 3.3 35 249-285 3-38 (369)
100 2a87_A TRXR, TR, thioredoxin r 97.2 0.00014 4.8E-09 76.9 3.3 37 247-285 11-47 (335)
101 1d4d_A Flavocytochrome C fumar 97.2 0.00013 4.5E-09 83.8 3.2 50 249-300 125-174 (572)
102 2gjc_A Thiazole biosynthetic e 97.2 0.00016 5.3E-09 77.5 3.5 39 249-287 64-102 (326)
103 1jnr_A Adenylylsulfate reducta 97.2 0.00015 5.3E-09 84.5 3.7 49 249-299 21-72 (643)
104 1i8t_A UDP-galactopyranose mut 97.2 0.00014 4.9E-09 78.8 3.1 33 251-285 2-34 (367)
105 1zk7_A HGII, reductase, mercur 97.2 0.00017 5.8E-09 80.4 3.8 38 248-287 2-39 (467)
106 1d5t_A Guanine nucleotide diss 97.2 0.0002 6.7E-09 79.4 4.1 37 247-285 3-39 (433)
107 3r9u_A Thioredoxin reductase; 97.1 0.00014 4.8E-09 75.4 2.6 36 249-286 3-39 (315)
108 2vvm_A Monoamine oxidase N; FA 97.1 0.0002 6.8E-09 80.1 3.9 33 251-285 40-72 (495)
109 2ywl_A Thioredoxin reductase r 97.1 0.0002 6.7E-09 68.8 3.3 33 251-285 2-34 (180)
110 2gmh_A Electron transfer flavo 97.1 0.00014 4.9E-09 83.8 2.7 35 249-285 34-74 (584)
111 4dsg_A UDP-galactopyranose mut 97.1 0.0002 6.9E-09 80.6 3.8 39 248-288 7-47 (484)
112 3lzw_A Ferredoxin--NADP reduct 97.1 0.00016 5.3E-09 75.7 2.6 34 250-285 7-40 (332)
113 2q0l_A TRXR, thioredoxin reduc 97.1 0.0002 6.7E-09 74.6 3.4 33 251-285 2-35 (311)
114 2r0c_A REBC; flavin adenine di 97.1 0.00022 7.6E-09 81.5 3.8 35 249-285 25-59 (549)
115 2iid_A L-amino-acid oxidase; f 97.1 0.00021 7.1E-09 80.1 3.4 35 249-285 32-66 (498)
116 3nlc_A Uncharacterized protein 97.1 0.00023 8E-09 81.4 3.8 37 248-286 105-141 (549)
117 2gv8_A Monooxygenase; FMO, FAD 97.1 0.00025 8.4E-09 78.7 3.9 36 248-285 4-41 (447)
118 2r9z_A Glutathione amide reduc 97.1 0.00023 7.9E-09 79.5 3.7 37 248-286 2-38 (463)
119 1ges_A Glutathione reductase; 97.1 0.00021 7.3E-09 79.4 3.3 37 248-286 2-38 (450)
120 1mo9_A ORF3; nucleotide bindin 97.1 0.00027 9.4E-09 80.2 4.2 37 247-285 40-76 (523)
121 2pyx_A Tryptophan halogenase; 97.1 0.00023 7.8E-09 80.8 3.4 38 249-286 6-53 (526)
122 3dk9_A Grase, GR, glutathione 97.1 0.0002 6.9E-09 80.1 2.9 39 247-287 17-55 (478)
123 3lad_A Dihydrolipoamide dehydr 97.0 0.00024 8.2E-09 79.3 3.4 35 249-285 2-36 (476)
124 3c4a_A Probable tryptophan hyd 97.0 0.00018 6.2E-09 77.8 2.3 36 251-286 1-36 (381)
125 3l8k_A Dihydrolipoyl dehydroge 97.0 0.0002 6.8E-09 80.0 2.5 36 248-285 2-37 (466)
126 2qv7_A Diacylglycerol kinase D 97.0 0.00095 3.2E-08 71.5 7.4 68 6-74 248-315 (337)
127 2hqm_A GR, grase, glutathione 97.0 0.00027 9.4E-09 79.2 3.3 38 248-287 9-46 (479)
128 3pl8_A Pyranose 2-oxidase; sub 97.0 0.00029 1E-08 81.8 3.7 40 247-288 43-82 (623)
129 3ic9_A Dihydrolipoamide dehydr 97.0 0.00027 9.1E-09 79.6 3.1 37 249-287 7-43 (492)
130 2zxi_A TRNA uridine 5-carboxym 96.9 0.00044 1.5E-08 80.1 4.5 35 249-285 26-60 (637)
131 2bry_A NEDD9 interacting prote 96.9 0.00038 1.3E-08 78.6 3.5 36 248-285 90-125 (497)
132 1ojt_A Surface protein; redox- 96.9 0.00035 1.2E-08 78.3 3.2 36 247-284 3-38 (482)
133 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.0005 1.7E-08 79.9 4.4 35 249-285 27-61 (651)
134 1xdi_A RV3303C-LPDA; reductase 96.9 0.00027 9.4E-09 79.5 2.2 37 250-286 2-39 (499)
135 1v59_A Dihydrolipoamide dehydr 96.9 0.0003 1E-08 78.6 2.4 36 247-284 2-37 (478)
136 3cp8_A TRNA uridine 5-carboxym 96.9 0.00046 1.6E-08 80.1 4.0 37 247-285 18-54 (641)
137 2a8x_A Dihydrolipoyl dehydroge 96.9 0.00037 1.3E-08 77.6 3.0 35 250-286 3-37 (464)
138 3iwa_A FAD-dependent pyridine 96.9 0.00041 1.4E-08 77.4 3.4 37 250-286 3-39 (472)
139 4gut_A Lysine-specific histone 96.8 0.00041 1.4E-08 82.6 3.2 36 248-285 334-369 (776)
140 2dkh_A 3-hydroxybenzoate hydro 96.8 0.00079 2.7E-08 78.4 5.2 37 248-285 30-66 (639)
141 2qae_A Lipoamide, dihydrolipoy 96.8 0.00051 1.7E-08 76.6 3.4 34 250-285 2-35 (468)
142 1w4x_A Phenylacetone monooxyge 96.8 0.00053 1.8E-08 78.1 3.5 37 247-285 13-49 (542)
143 1fl2_A Alkyl hydroperoxide red 96.8 0.00051 1.8E-08 71.4 3.1 33 250-284 1-33 (310)
144 3dgh_A TRXR-1, thioredoxin red 96.8 0.00064 2.2E-08 76.1 4.0 35 248-284 7-41 (483)
145 3qvp_A Glucose oxidase; oxidor 96.8 0.00059 2E-08 78.7 3.7 37 248-285 17-53 (583)
146 1onf_A GR, grase, glutathione 96.8 0.00058 2E-08 77.0 3.4 35 250-286 2-36 (500)
147 3gwf_A Cyclohexanone monooxyge 96.8 0.00051 1.8E-08 78.4 3.0 35 249-285 7-42 (540)
148 3qfa_A Thioredoxin reductase 1 96.7 0.00083 2.8E-08 76.2 4.6 37 247-285 29-65 (519)
149 3kd9_A Coenzyme A disulfide re 96.7 0.00061 2.1E-08 75.5 3.5 36 250-285 3-38 (449)
150 3oc4_A Oxidoreductase, pyridin 96.7 0.0006 2E-08 75.7 3.2 35 251-285 3-37 (452)
151 1b37_A Protein (polyamine oxid 96.7 0.00071 2.4E-08 75.3 3.7 35 249-285 3-38 (472)
152 3k30_A Histamine dehydrogenase 96.7 0.00069 2.4E-08 79.6 3.8 36 248-285 389-424 (690)
153 3lxd_A FAD-dependent pyridine 96.7 0.00069 2.3E-08 74.2 3.3 36 248-285 7-44 (415)
154 1zmd_A Dihydrolipoyl dehydroge 96.7 0.00064 2.2E-08 75.9 3.0 35 249-285 5-39 (474)
155 3h28_A Sulfide-quinone reducta 96.7 0.00071 2.4E-08 74.5 3.3 35 251-285 3-37 (430)
156 3t37_A Probable dehydrogenase; 96.7 0.00066 2.2E-08 76.6 2.9 37 248-285 15-51 (526)
157 3uox_A Otemo; baeyer-villiger 96.6 0.00078 2.7E-08 77.0 3.4 36 248-285 7-42 (545)
158 1ebd_A E3BD, dihydrolipoamide 96.6 0.00074 2.5E-08 74.9 3.1 35 250-286 3-37 (455)
159 3s40_A Diacylglycerol kinase; 96.6 0.0019 6.4E-08 68.2 6.0 70 7-78 232-301 (304)
160 3dgz_A Thioredoxin reductase 2 96.6 0.00093 3.2E-08 74.9 3.8 35 249-285 5-39 (488)
161 2vdc_G Glutamate synthase [NAD 96.6 0.00094 3.2E-08 74.6 3.8 35 249-285 121-155 (456)
162 4ap3_A Steroid monooxygenase; 96.6 0.00075 2.6E-08 77.2 3.0 36 248-285 19-54 (549)
163 1dxl_A Dihydrolipoamide dehydr 96.6 0.00085 2.9E-08 74.7 3.3 35 249-285 5-39 (470)
164 2eq6_A Pyruvate dehydrogenase 96.6 0.00087 3E-08 74.8 3.4 35 250-286 6-40 (464)
165 3q9t_A Choline dehydrogenase a 96.6 0.0011 3.8E-08 76.3 4.3 37 249-286 5-41 (577)
166 3fim_B ARYL-alcohol oxidase; A 96.6 0.0013 4.5E-08 75.5 4.9 35 250-285 2-36 (566)
167 1q1r_A Putidaredoxin reductase 96.6 0.00096 3.3E-08 73.7 3.3 36 248-285 2-39 (431)
168 2v3a_A Rubredoxin reductase; a 96.5 0.00092 3.1E-08 72.4 3.1 36 248-285 2-39 (384)
169 3ics_A Coenzyme A-disulfide re 96.5 0.0011 3.6E-08 76.2 3.5 38 249-286 35-72 (588)
170 1kdg_A CDH, cellobiose dehydro 96.5 0.00099 3.4E-08 75.9 3.2 37 248-286 5-41 (546)
171 2yqu_A 2-oxoglutarate dehydrog 96.5 0.0011 3.7E-08 73.6 3.2 34 250-285 1-34 (455)
172 3g5s_A Methylenetetrahydrofola 96.5 0.0011 3.8E-08 72.5 3.1 33 251-285 2-34 (443)
173 3s5w_A L-ornithine 5-monooxyge 96.4 0.00075 2.6E-08 74.7 1.6 35 249-285 29-68 (463)
174 1y56_A Hypothetical protein PH 96.4 0.0009 3.1E-08 75.4 2.2 36 247-285 105-140 (493)
175 1lvl_A Dihydrolipoamide dehydr 96.4 0.00092 3.2E-08 74.4 2.2 36 249-286 4-39 (458)
176 2z3y_A Lysine-specific histone 96.4 0.0015 5.2E-08 76.3 4.1 36 248-285 105-140 (662)
177 3fg2_P Putative rubredoxin red 96.4 0.0013 4.5E-08 71.8 3.1 33 251-285 2-36 (404)
178 3sx6_A Sulfide-quinone reducta 96.4 0.0013 4.5E-08 72.6 3.1 36 250-285 4-40 (437)
179 3h8l_A NADH oxidase; membrane 96.4 0.0012 4.1E-08 72.0 2.7 35 251-285 2-37 (409)
180 1fec_A Trypanothione reductase 96.4 0.0014 4.7E-08 73.8 3.2 33 249-282 2-34 (490)
181 1m6i_A Programmed cell death p 96.3 0.0015 5.3E-08 73.4 3.3 39 247-285 8-46 (493)
182 2wpf_A Trypanothione reductase 96.3 0.0015 5.1E-08 73.6 3.1 36 247-283 4-39 (495)
183 1pn0_A Phenol 2-monooxygenase; 96.3 0.0018 6.1E-08 75.8 3.6 37 249-285 7-46 (665)
184 3ef6_A Toluene 1,2-dioxygenase 96.3 0.0018 6.1E-08 71.0 3.4 33 251-285 3-37 (410)
185 2xag_A Lysine-specific histone 96.3 0.0019 6.5E-08 77.6 3.8 36 248-285 276-311 (852)
186 1o94_A Tmadh, trimethylamine d 96.2 0.0023 8E-08 75.6 4.1 36 248-285 387-422 (729)
187 2x8g_A Thioredoxin glutathione 96.2 0.0022 7.6E-08 73.8 3.8 34 249-284 106-139 (598)
188 1hyu_A AHPF, alkyl hydroperoxi 96.2 0.0021 7.3E-08 72.8 3.6 35 248-284 210-244 (521)
189 2cdu_A NADPH oxidase; flavoenz 96.1 0.0019 6.5E-08 71.6 2.5 35 251-285 1-35 (452)
190 3ntd_A FAD-dependent pyridine 96.1 0.0023 7.9E-08 72.8 3.2 35 251-285 2-36 (565)
191 1nhp_A NADH peroxidase; oxidor 96.0 0.0028 9.5E-08 70.1 3.4 35 251-285 1-35 (447)
192 3hyw_A Sulfide-quinone reducta 96.0 0.0028 9.5E-08 69.9 3.3 35 251-285 3-37 (430)
193 3cgb_A Pyridine nucleotide-dis 96.0 0.0028 9.7E-08 70.9 3.2 37 250-286 36-72 (480)
194 2gqw_A Ferredoxin reductase; f 96.0 0.0024 8.4E-08 69.9 2.6 35 249-285 6-42 (408)
195 2xve_A Flavin-containing monoo 96.0 0.0029 9.8E-08 70.7 3.2 35 251-285 3-41 (464)
196 2bc0_A NADH oxidase; flavoprot 96.0 0.0021 7.1E-08 72.2 2.0 34 250-285 35-71 (490)
197 1ps9_A 2,4-dienoyl-COA reducta 95.9 0.0037 1.3E-07 73.0 4.1 36 248-285 371-406 (671)
198 3ayj_A Pro-enzyme of L-phenyla 95.9 0.002 6.8E-08 75.8 1.5 34 250-285 56-97 (721)
199 1coy_A Cholesterol oxidase; ox 95.9 0.0037 1.3E-07 70.6 3.5 37 247-285 8-44 (507)
200 1ju2_A HydroxynitrIle lyase; f 95.9 0.0028 9.7E-08 72.2 2.6 36 248-286 24-59 (536)
201 1n4w_A CHOD, cholesterol oxida 95.9 0.0033 1.1E-07 70.9 3.1 35 249-285 4-38 (504)
202 2jbv_A Choline oxidase; alcoho 95.8 0.0033 1.1E-07 71.8 3.0 37 249-286 12-48 (546)
203 2gag_A Heterotetrameric sarcos 95.7 0.0043 1.5E-07 75.7 3.5 36 248-285 126-161 (965)
204 1xhc_A NADH oxidase /nitrite r 95.7 0.0043 1.5E-07 67.0 2.8 33 251-286 9-41 (367)
205 1lqt_A FPRA; NADP+ derivative, 95.6 0.0041 1.4E-07 69.3 2.4 36 250-285 3-43 (456)
206 3vrd_B FCCB subunit, flavocyto 95.6 0.0055 1.9E-07 66.4 3.2 34 252-285 4-37 (401)
207 2bon_A Lipid kinase; DAG kinas 95.5 0.0078 2.7E-07 64.3 4.1 62 9-74 255-316 (332)
208 4b1b_A TRXR, thioredoxin reduc 95.5 0.0077 2.6E-07 68.8 4.2 35 250-286 42-76 (542)
209 1gpe_A Protein (glucose oxidas 95.4 0.0064 2.2E-07 70.0 3.3 37 248-285 22-58 (587)
210 1gte_A Dihydropyrimidine dehyd 95.3 0.0076 2.6E-07 74.0 3.6 35 249-285 186-221 (1025)
211 3klj_A NAD(FAD)-dependent dehy 95.3 0.0073 2.5E-07 65.8 3.0 35 249-285 8-42 (385)
212 1cjc_A Protein (adrenodoxin re 95.2 0.0076 2.6E-07 67.3 2.9 37 249-285 5-41 (460)
213 4g6h_A Rotenone-insensitive NA 95.1 0.0089 3.1E-07 67.5 3.1 35 249-285 41-75 (502)
214 4eqs_A Coenzyme A disulfide re 94.7 0.015 5E-07 64.4 3.5 34 252-285 2-35 (437)
215 1vg0_A RAB proteins geranylger 94.5 0.018 6.3E-07 66.8 3.7 37 247-285 5-41 (650)
216 1lss_A TRK system potassium up 93.7 0.036 1.2E-06 50.1 3.2 33 251-285 5-37 (140)
217 3ado_A Lambda-crystallin; L-gu 93.3 0.038 1.3E-06 58.8 3.1 34 250-285 6-39 (319)
218 3ic5_A Putative saccharopine d 93.3 0.045 1.5E-06 47.8 3.1 33 251-285 6-39 (118)
219 4e12_A Diketoreductase; oxidor 93.3 0.043 1.5E-06 57.0 3.4 34 250-285 4-37 (283)
220 3llv_A Exopolyphosphatase-rela 93.2 0.046 1.6E-06 50.0 3.2 33 251-285 7-39 (141)
221 3fwz_A Inner membrane protein 93.0 0.061 2.1E-06 49.5 3.8 34 250-285 7-40 (140)
222 1f0y_A HCDH, L-3-hydroxyacyl-C 93.0 0.048 1.6E-06 57.0 3.4 33 251-285 16-48 (302)
223 2g1u_A Hypothetical protein TM 92.9 0.061 2.1E-06 50.3 3.6 34 250-285 19-52 (155)
224 1id1_A Putative potassium chan 92.6 0.068 2.3E-06 49.8 3.4 33 250-284 3-35 (153)
225 3k96_A Glycerol-3-phosphate de 92.5 0.059 2E-06 58.1 3.3 36 248-285 27-62 (356)
226 4b63_A L-ornithine N5 monooxyg 92.4 0.033 1.1E-06 62.7 1.1 50 248-301 37-98 (501)
227 3i83_A 2-dehydropantoate 2-red 92.1 0.066 2.3E-06 56.5 3.0 33 251-285 3-35 (320)
228 3hn2_A 2-dehydropantoate 2-red 92.1 0.069 2.4E-06 56.1 3.1 33 251-285 3-35 (312)
229 3c85_A Putative glutathione-re 91.9 0.079 2.7E-06 50.8 3.1 34 250-285 39-73 (183)
230 1bg6_A N-(1-D-carboxylethyl)-L 91.9 0.075 2.6E-06 56.4 3.1 34 250-285 4-37 (359)
231 2dpo_A L-gulonate 3-dehydrogen 91.6 0.083 2.8E-06 56.1 3.1 33 251-285 7-39 (319)
232 2ewd_A Lactate dehydrogenase,; 91.3 0.085 2.9E-06 55.7 2.7 35 249-285 3-38 (317)
233 3ghy_A Ketopantoate reductase 91.2 0.096 3.3E-06 55.6 3.1 32 251-284 4-35 (335)
234 3k6j_A Protein F01G10.3, confi 91.1 0.1 3.5E-06 58.2 3.3 33 251-285 55-87 (460)
235 2hmt_A YUAA protein; RCK, KTN, 91.0 0.11 3.6E-06 47.0 2.8 33 251-285 7-39 (144)
236 1nhp_A NADH peroxidase; oxidor 90.8 0.12 4.1E-06 56.8 3.5 35 249-285 148-182 (447)
237 2y0c_A BCEC, UDP-glucose dehyd 90.8 0.11 3.7E-06 58.4 3.1 34 250-285 8-41 (478)
238 3tl2_A Malate dehydrogenase; c 90.8 0.12 4.3E-06 54.7 3.5 35 248-284 6-41 (315)
239 3g79_A NDP-N-acetyl-D-galactos 90.8 0.12 4.1E-06 58.0 3.5 35 249-285 17-53 (478)
240 2ew2_A 2-dehydropantoate 2-red 90.7 0.11 3.9E-06 53.7 3.0 33 251-285 4-36 (316)
241 1pzg_A LDH, lactate dehydrogen 90.7 0.11 3.8E-06 55.4 3.0 34 250-285 9-43 (331)
242 3qha_A Putative oxidoreductase 90.7 0.12 4.1E-06 53.9 3.2 37 247-285 12-48 (296)
243 3gg2_A Sugar dehydrogenase, UD 90.7 0.11 3.8E-06 57.7 3.1 33 251-285 3-35 (450)
244 3g17_A Similar to 2-dehydropan 90.6 0.089 3E-06 54.8 2.1 33 251-285 3-35 (294)
245 4gcm_A TRXR, thioredoxin reduc 90.4 0.12 4.2E-06 53.4 2.9 32 251-284 146-177 (312)
246 2qyt_A 2-dehydropantoate 2-red 90.3 0.095 3.2E-06 54.6 2.0 31 251-283 9-45 (317)
247 3dfu_A Uncharacterized protein 90.3 0.15 5.1E-06 51.7 3.4 34 249-284 5-38 (232)
248 4huj_A Uncharacterized protein 90.2 0.14 4.9E-06 50.9 3.1 34 250-285 23-57 (220)
249 3l4b_C TRKA K+ channel protien 90.2 0.14 4.6E-06 50.7 3.0 32 252-285 2-33 (218)
250 4e21_A 6-phosphogluconate dehy 90.1 0.14 4.7E-06 55.3 3.1 37 247-285 19-55 (358)
251 1t2d_A LDH-P, L-lactate dehydr 90.0 0.16 5.3E-06 54.0 3.3 34 250-285 4-38 (322)
252 3mog_A Probable 3-hydroxybutyr 90.0 0.14 4.8E-06 57.5 3.2 34 250-285 5-38 (483)
253 3g3e_A D-amino-acid oxidase; F 90.0 0.074 2.5E-06 56.2 0.8 56 635-690 149-205 (351)
254 1ks9_A KPA reductase;, 2-dehyd 89.9 0.15 5.1E-06 52.2 3.0 32 252-285 2-33 (291)
255 1lld_A L-lactate dehydrogenase 89.8 0.15 5.3E-06 53.4 3.1 33 251-285 8-42 (319)
256 2uyy_A N-PAC protein; long-cha 89.6 0.19 6.4E-06 52.6 3.6 37 247-285 27-63 (316)
257 4a5l_A Thioredoxin reductase; 89.6 0.17 5.8E-06 52.1 3.2 33 250-284 152-184 (314)
258 3klj_A NAD(FAD)-dependent dehy 89.5 0.13 4.3E-06 55.9 2.2 34 250-285 146-179 (385)
259 1zcj_A Peroxisomal bifunctiona 89.5 0.17 6E-06 56.3 3.4 33 251-285 38-70 (463)
260 3doj_A AT3G25530, dehydrogenas 89.5 0.19 6.5E-06 52.7 3.5 34 250-285 21-54 (310)
261 2eq6_A Pyruvate dehydrogenase 89.4 0.16 5.5E-06 56.3 3.0 33 251-285 170-202 (464)
262 2q3e_A UDP-glucose 6-dehydroge 89.2 0.17 5.7E-06 56.5 3.0 36 250-285 5-40 (467)
263 2v3a_A Rubredoxin reductase; a 89.0 0.19 6.5E-06 54.0 3.2 34 250-285 145-178 (384)
264 2yqu_A 2-oxoglutarate dehydrog 88.9 0.18 6.3E-06 55.5 3.0 33 251-285 168-200 (455)
265 2raf_A Putative dinucleotide-b 88.8 0.2 7E-06 49.4 3.0 34 250-285 19-52 (209)
266 3g0o_A 3-hydroxyisobutyrate de 88.8 0.2 6.9E-06 52.2 3.1 34 250-285 7-40 (303)
267 2hjr_A Malate dehydrogenase; m 88.7 0.21 7.2E-06 53.1 3.2 33 251-285 15-48 (328)
268 1lvl_A Dihydrolipoamide dehydr 88.7 0.16 5.4E-06 56.2 2.3 33 251-285 172-204 (458)
269 1z82_A Glycerol-3-phosphate de 88.6 0.21 7.1E-06 52.9 3.1 33 250-284 14-46 (335)
270 1ebd_A E3BD, dihydrolipoamide 88.6 0.2 7E-06 55.1 3.2 34 250-285 170-203 (455)
271 1xhc_A NADH oxidase /nitrite r 88.6 0.21 7.1E-06 53.7 3.1 33 251-285 144-176 (367)
272 1mv8_A GMD, GDP-mannose 6-dehy 88.6 0.21 7.3E-06 55.1 3.3 32 252-285 2-33 (436)
273 4dll_A 2-hydroxy-3-oxopropiona 88.5 0.25 8.6E-06 52.1 3.6 34 250-285 31-64 (320)
274 3cky_A 2-hydroxymethyl glutara 88.3 0.25 8.5E-06 51.1 3.4 34 250-285 4-37 (301)
275 1evy_A Glycerol-3-phosphate de 88.2 0.19 6.3E-06 53.9 2.4 31 252-284 17-47 (366)
276 1v59_A Dihydrolipoamide dehydr 88.1 0.22 7.5E-06 55.2 3.0 34 250-285 183-216 (478)
277 4a7p_A UDP-glucose dehydrogena 88.0 0.24 8.3E-06 55.0 3.2 34 250-285 8-41 (446)
278 3vtf_A UDP-glucose 6-dehydroge 87.9 0.21 7.2E-06 55.4 2.6 35 249-285 20-54 (444)
279 4g65_A TRK system potassium up 87.9 0.19 6.6E-06 56.0 2.4 34 250-285 3-36 (461)
280 4ezb_A Uncharacterized conserv 87.9 0.25 8.4E-06 52.2 3.1 35 249-285 23-58 (317)
281 3pef_A 6-phosphogluconate dehy 87.8 0.27 9.1E-06 50.8 3.2 33 251-285 2-34 (287)
282 1kyq_A Met8P, siroheme biosynt 87.7 0.26 8.7E-06 51.3 2.9 34 250-285 13-46 (274)
283 1ges_A Glutathione reductase; 87.6 0.24 8.3E-06 54.6 2.9 33 251-285 168-200 (450)
284 3pqe_A L-LDH, L-lactate dehydr 87.6 0.24 8.2E-06 52.8 2.7 34 249-284 4-39 (326)
285 3dtt_A NADP oxidoreductase; st 87.4 0.3 1E-05 49.3 3.3 34 250-285 19-52 (245)
286 3oj0_A Glutr, glutamyl-tRNA re 87.3 0.25 8.6E-06 45.4 2.4 34 250-285 21-54 (144)
287 2o3j_A UDP-glucose 6-dehydroge 87.3 0.26 8.9E-06 55.2 3.0 35 251-285 10-44 (481)
288 2gqw_A Ferredoxin reductase; f 87.2 0.29 9.8E-06 53.3 3.2 34 250-285 145-178 (408)
289 2v6b_A L-LDH, L-lactate dehydr 87.2 0.28 9.7E-06 51.4 3.0 32 252-285 2-35 (304)
290 2izz_A Pyrroline-5-carboxylate 87.0 0.28 9.7E-06 51.7 2.9 37 247-285 19-59 (322)
291 2h78_A Hibadh, 3-hydroxyisobut 87.0 0.33 1.1E-05 50.4 3.4 33 251-285 4-36 (302)
292 1jw9_B Molybdopterin biosynthe 86.8 0.25 8.7E-06 50.3 2.3 35 250-286 31-66 (249)
293 3hwr_A 2-dehydropantoate 2-red 86.8 0.3 1E-05 51.4 3.0 32 250-284 19-50 (318)
294 1txg_A Glycerol-3-phosphate de 86.8 0.24 8.3E-06 51.9 2.2 30 252-283 2-31 (335)
295 2r9z_A Glutathione amide reduc 86.3 0.31 1.1E-05 53.9 2.9 33 251-285 167-199 (463)
296 1y6j_A L-lactate dehydrogenase 86.3 0.33 1.1E-05 51.4 3.0 34 250-285 7-42 (318)
297 1guz_A Malate dehydrogenase; o 86.2 0.35 1.2E-05 50.9 3.1 34 252-285 2-35 (310)
298 1ur5_A Malate dehydrogenase; o 86.2 0.36 1.2E-05 50.8 3.1 33 251-285 3-36 (309)
299 2vns_A Metalloreductase steap3 86.2 0.37 1.3E-05 47.7 3.1 33 251-285 29-61 (215)
300 3lk7_A UDP-N-acetylmuramoylala 86.1 0.43 1.5E-05 52.9 3.8 34 250-285 9-42 (451)
301 3pdu_A 3-hydroxyisobutyrate de 85.9 0.33 1.1E-05 50.1 2.7 32 252-285 3-34 (287)
302 3c7a_A Octopine dehydrogenase; 85.9 0.28 9.7E-06 53.2 2.2 30 251-282 3-33 (404)
303 2bc0_A NADH oxidase; flavoprot 85.9 0.36 1.2E-05 53.8 3.2 34 250-285 194-227 (490)
304 3cgb_A Pyridine nucleotide-dis 85.8 0.34 1.2E-05 53.9 2.9 35 249-285 185-219 (480)
305 3l6d_A Putative oxidoreductase 85.7 0.41 1.4E-05 50.1 3.3 34 250-285 9-42 (306)
306 2zyd_A 6-phosphogluconate dehy 85.5 0.37 1.3E-05 54.0 3.0 34 249-284 14-47 (480)
307 3gvi_A Malate dehydrogenase; N 85.4 0.43 1.5E-05 50.7 3.3 34 250-285 7-41 (324)
308 3ius_A Uncharacterized conserv 85.4 0.39 1.3E-05 48.8 2.9 33 251-285 6-38 (286)
309 3gpi_A NAD-dependent epimerase 85.4 0.45 1.5E-05 48.5 3.3 33 251-285 4-36 (286)
310 2wtb_A MFP2, fatty acid multif 85.4 0.4 1.4E-05 56.5 3.3 33 251-285 313-345 (725)
311 1vpd_A Tartronate semialdehyde 85.4 0.44 1.5E-05 49.2 3.3 33 251-285 6-38 (299)
312 3ggo_A Prephenate dehydrogenas 85.2 0.47 1.6E-05 50.0 3.4 34 250-285 33-68 (314)
313 1x0v_A GPD-C, GPDH-C, glycerol 85.1 0.26 8.9E-06 52.3 1.4 33 251-285 9-48 (354)
314 1ojt_A Surface protein; redox- 85.0 0.33 1.1E-05 54.0 2.3 34 250-285 185-218 (482)
315 3qsg_A NAD-binding phosphogluc 84.9 0.34 1.2E-05 50.9 2.2 33 250-284 24-57 (312)
316 1zmd_A Dihydrolipoyl dehydroge 84.9 0.41 1.4E-05 52.9 3.0 33 251-285 179-211 (474)
317 1q1r_A Putidaredoxin reductase 84.8 0.42 1.4E-05 52.3 3.0 34 250-285 149-182 (431)
318 3dfz_A SIRC, precorrin-2 dehyd 84.8 0.45 1.5E-05 47.9 2.9 33 250-284 31-63 (223)
319 1zej_A HBD-9, 3-hydroxyacyl-CO 84.8 0.46 1.6E-05 49.8 3.1 33 250-285 12-44 (293)
320 1jay_A Coenzyme F420H2:NADP+ o 84.7 0.47 1.6E-05 46.3 3.0 31 252-284 2-33 (212)
321 3dhn_A NAD-dependent epimerase 84.7 0.46 1.6E-05 46.5 2.9 33 251-285 5-38 (227)
322 3ego_A Probable 2-dehydropanto 84.7 0.46 1.6E-05 49.8 3.1 32 251-285 3-34 (307)
323 2a8x_A Dihydrolipoyl dehydroge 84.6 0.43 1.5E-05 52.6 3.0 33 251-285 172-204 (464)
324 2rcy_A Pyrroline carboxylate r 84.6 0.4 1.4E-05 48.4 2.5 33 251-285 5-41 (262)
325 3ic9_A Dihydrolipoamide dehydr 84.5 0.43 1.5E-05 53.3 3.0 34 250-285 174-207 (492)
326 3ojo_A CAP5O; rossmann fold, c 84.5 0.49 1.7E-05 52.3 3.3 33 251-285 12-44 (431)
327 3c24_A Putative oxidoreductase 84.5 0.51 1.8E-05 48.6 3.3 33 251-285 12-45 (286)
328 3d1c_A Flavin-containing putat 84.3 0.45 1.6E-05 50.0 2.9 33 251-285 167-199 (369)
329 1a5z_A L-lactate dehydrogenase 84.2 0.39 1.3E-05 50.7 2.3 32 252-285 2-35 (319)
330 3p7m_A Malate dehydrogenase; p 84.2 0.54 1.9E-05 49.8 3.4 34 250-285 5-39 (321)
331 2p4q_A 6-phosphogluconate dehy 84.0 0.5 1.7E-05 53.2 3.2 35 249-285 9-43 (497)
332 1wdk_A Fatty oxidation complex 84.0 0.48 1.6E-05 55.8 3.1 33 251-285 315-347 (715)
333 1dxl_A Dihydrolipoamide dehydr 83.8 0.36 1.2E-05 53.2 1.9 34 250-285 177-210 (470)
334 3ef6_A Toluene 1,2-dioxygenase 83.8 0.5 1.7E-05 51.3 3.0 34 250-285 143-176 (410)
335 1c0p_A D-amino acid oxidase; a 83.7 0.4 1.4E-05 50.7 2.2 55 636-690 150-206 (363)
336 1yqg_A Pyrroline-5-carboxylate 83.7 0.44 1.5E-05 48.2 2.3 31 252-284 2-33 (263)
337 2f1k_A Prephenate dehydrogenas 83.7 0.53 1.8E-05 48.0 3.0 32 252-285 2-33 (279)
338 2x5o_A UDP-N-acetylmuramoylala 83.7 0.49 1.7E-05 52.2 2.9 33 251-285 6-38 (439)
339 1zud_1 Adenylyltransferase THI 83.6 0.65 2.2E-05 47.3 3.6 35 250-286 28-63 (251)
340 2q0l_A TRXR, thioredoxin reduc 83.6 0.54 1.8E-05 48.2 3.0 34 250-285 143-176 (311)
341 2hqm_A GR, grase, glutathione 83.5 0.52 1.8E-05 52.3 3.0 33 251-285 186-218 (479)
342 3pid_A UDP-glucose 6-dehydroge 83.4 0.55 1.9E-05 51.9 3.1 33 250-285 36-68 (432)
343 2pv7_A T-protein [includes: ch 83.4 0.63 2.2E-05 48.4 3.4 33 251-285 22-55 (298)
344 3gt0_A Pyrroline-5-carboxylate 83.3 0.61 2.1E-05 47.0 3.2 33 251-285 3-39 (247)
345 3kd9_A Coenzyme A disulfide re 83.2 0.57 1.9E-05 51.4 3.2 33 251-285 149-181 (449)
346 4gwg_A 6-phosphogluconate dehy 83.2 0.57 2E-05 52.5 3.2 34 250-285 4-37 (484)
347 2gf2_A Hibadh, 3-hydroxyisobut 83.2 0.61 2.1E-05 48.0 3.2 32 252-285 2-33 (296)
348 1hyh_A L-hicdh, L-2-hydroxyiso 83.1 0.47 1.6E-05 49.7 2.3 32 252-285 3-36 (309)
349 2cdu_A NADPH oxidase; flavoenz 83.1 0.58 2E-05 51.4 3.2 34 250-285 149-182 (452)
350 1yj8_A Glycerol-3-phosphate de 83.0 0.4 1.4E-05 51.5 1.8 33 251-285 22-61 (375)
351 1onf_A GR, grase, glutathione 83.0 0.55 1.9E-05 52.5 3.0 34 250-285 176-209 (500)
352 1fl2_A Alkyl hydroperoxide red 83.0 0.55 1.9E-05 48.1 2.8 34 250-285 144-177 (310)
353 4eqs_A Coenzyme A disulfide re 82.9 0.49 1.7E-05 52.0 2.5 34 250-285 147-180 (437)
354 2iz1_A 6-phosphogluconate dehy 82.8 0.61 2.1E-05 52.1 3.2 33 250-284 5-37 (474)
355 3l9w_A Glutathione-regulated p 82.7 0.61 2.1E-05 51.2 3.2 34 250-285 4-37 (413)
356 3zwc_A Peroxisomal bifunctiona 82.7 0.55 1.9E-05 55.4 2.9 34 250-285 316-349 (742)
357 4b1b_A TRXR, thioredoxin reduc 82.6 0.59 2E-05 53.2 3.0 33 250-284 223-255 (542)
358 1nyt_A Shikimate 5-dehydrogena 82.6 0.67 2.3E-05 47.6 3.2 33 251-285 120-152 (271)
359 3e8x_A Putative NAD-dependent 82.4 0.69 2.4E-05 45.7 3.1 34 250-285 21-55 (236)
360 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.3 0.62 2.1E-05 52.1 3.0 31 252-284 3-33 (478)
361 3h2s_A Putative NADH-flavin re 82.2 0.69 2.4E-05 45.0 3.0 32 252-285 2-34 (224)
362 3ew7_A LMO0794 protein; Q8Y8U8 82.2 0.69 2.4E-05 44.7 3.0 32 252-285 2-34 (221)
363 1hdo_A Biliverdin IX beta redu 82.2 0.8 2.7E-05 43.6 3.5 33 251-285 4-37 (206)
364 1vdc_A NTR, NADPH dependent th 82.2 0.61 2.1E-05 48.3 2.8 34 250-285 159-192 (333)
365 1zk7_A HGII, reductase, mercur 82.1 0.63 2.2E-05 51.3 3.0 34 250-285 176-209 (467)
366 3s5w_A L-ornithine 5-monooxyge 82.0 0.61 2.1E-05 51.1 2.9 36 250-285 227-262 (463)
367 3tri_A Pyrroline-5-carboxylate 82.0 0.72 2.4E-05 47.7 3.2 34 250-285 3-39 (280)
368 2pgd_A 6-phosphogluconate dehy 82.0 0.64 2.2E-05 52.0 3.0 33 251-285 3-35 (482)
369 3h8v_A Ubiquitin-like modifier 82.0 0.59 2E-05 48.9 2.5 37 249-287 35-72 (292)
370 2qae_A Lipoamide, dihydrolipoy 81.9 0.65 2.2E-05 51.2 3.0 34 250-285 174-207 (468)
371 1oju_A MDH, malate dehydrogena 81.9 0.55 1.9E-05 49.2 2.3 32 252-285 2-35 (294)
372 2x8g_A Thioredoxin glutathione 81.8 0.64 2.2E-05 53.1 3.0 32 251-284 287-318 (598)
373 1p77_A Shikimate 5-dehydrogena 81.6 0.77 2.6E-05 47.2 3.2 33 251-285 120-152 (272)
374 3ktd_A Prephenate dehydrogenas 81.6 0.76 2.6E-05 49.1 3.3 33 251-285 9-41 (341)
375 1trb_A Thioredoxin reductase; 81.6 0.66 2.3E-05 47.7 2.8 34 250-285 145-178 (320)
376 2xve_A Flavin-containing monoo 81.5 0.78 2.7E-05 50.8 3.5 34 250-285 197-230 (464)
377 2q7v_A Thioredoxin reductase; 81.4 0.68 2.3E-05 47.9 2.8 34 250-285 152-185 (325)
378 3eag_A UDP-N-acetylmuramate:L- 81.4 0.85 2.9E-05 48.1 3.6 33 251-285 5-38 (326)
379 4dio_A NAD(P) transhydrogenase 81.4 0.76 2.6E-05 50.3 3.2 34 250-285 190-223 (405)
380 1dlj_A UDP-glucose dehydrogena 81.3 0.66 2.3E-05 50.6 2.8 31 252-285 2-32 (402)
381 4gbj_A 6-phosphogluconate dehy 81.2 0.76 2.6E-05 48.0 3.1 33 251-285 6-38 (297)
382 3gwf_A Cyclohexanone monooxyge 81.1 0.72 2.4E-05 52.3 3.0 34 250-285 178-211 (540)
383 3fi9_A Malate dehydrogenase; s 81.1 0.81 2.8E-05 49.0 3.3 34 249-284 7-43 (343)
384 1y7t_A Malate dehydrogenase; N 81.1 0.69 2.3E-05 48.8 2.7 34 249-284 3-44 (327)
385 4aj2_A L-lactate dehydrogenase 80.9 0.85 2.9E-05 48.6 3.3 34 249-284 18-53 (331)
386 3ntd_A FAD-dependent pyridine 80.9 0.76 2.6E-05 51.9 3.2 33 251-285 152-184 (565)
387 3b1f_A Putative prephenate deh 80.9 0.75 2.6E-05 47.3 2.8 36 250-285 6-41 (290)
388 3lxd_A FAD-dependent pyridine 80.8 0.79 2.7E-05 49.6 3.2 34 250-285 152-185 (415)
389 2g5c_A Prephenate dehydrogenas 80.8 0.79 2.7E-05 46.9 3.0 32 252-285 3-36 (281)
390 3rui_A Ubiquitin-like modifier 80.8 0.86 2.9E-05 48.7 3.3 36 250-287 34-70 (340)
391 3ldh_A Lactate dehydrogenase; 80.7 0.71 2.4E-05 49.2 2.6 33 250-284 21-55 (330)
392 3qfa_A Thioredoxin reductase 1 80.6 0.75 2.6E-05 51.7 3.0 32 251-284 211-242 (519)
393 2zbw_A Thioredoxin reductase; 80.6 0.71 2.4E-05 47.8 2.6 34 250-285 152-185 (335)
394 2a87_A TRXR, TR, thioredoxin r 80.5 0.76 2.6E-05 47.9 2.8 34 250-285 155-188 (335)
395 1i36_A Conserved hypothetical 80.5 0.73 2.5E-05 46.6 2.6 30 252-283 2-31 (264)
396 2i6t_A Ubiquitin-conjugating e 80.4 0.7 2.4E-05 48.6 2.4 33 251-285 15-49 (303)
397 3p2y_A Alanine dehydrogenase/p 80.3 0.71 2.4E-05 50.1 2.5 34 250-285 184-217 (381)
398 2ahr_A Putative pyrroline carb 80.1 0.84 2.9E-05 46.0 2.9 33 251-285 4-36 (259)
399 3urh_A Dihydrolipoyl dehydroge 80.1 0.67 2.3E-05 51.5 2.3 34 250-285 198-231 (491)
400 3fg2_P Putative rubredoxin red 80.0 0.83 2.9E-05 49.3 3.0 34 250-285 142-175 (404)
401 3dk9_A Grase, GR, glutathione 80.0 0.82 2.8E-05 50.6 3.0 33 251-285 188-220 (478)
402 2aef_A Calcium-gated potassium 80.0 0.61 2.1E-05 46.4 1.8 34 249-285 8-41 (234)
403 3nep_X Malate dehydrogenase; h 79.8 0.73 2.5E-05 48.7 2.4 32 252-285 2-35 (314)
404 3dgz_A Thioredoxin reductase 2 79.8 0.83 2.8E-05 50.7 3.0 32 251-284 186-217 (488)
405 2egg_A AROE, shikimate 5-dehyd 79.8 0.95 3.2E-05 47.3 3.2 33 251-285 142-175 (297)
406 2wpf_A Trypanothione reductase 79.6 0.73 2.5E-05 51.5 2.5 33 251-285 192-227 (495)
407 3oc4_A Oxidoreductase, pyridin 79.6 0.91 3.1E-05 49.9 3.2 34 250-285 147-180 (452)
408 1yb4_A Tartronic semialdehyde 79.5 0.81 2.8E-05 46.9 2.6 30 251-282 4-33 (295)
409 3r6d_A NAD-dependent epimerase 79.4 1.1 3.9E-05 43.6 3.5 32 252-285 7-40 (221)
410 3l8k_A Dihydrolipoyl dehydroge 79.1 0.92 3.1E-05 50.1 3.0 34 250-285 172-205 (466)
411 3uox_A Otemo; baeyer-villiger 79.1 0.85 2.9E-05 51.8 2.8 34 250-285 185-218 (545)
412 1ez4_A Lactate dehydrogenase; 79.1 0.87 3E-05 48.1 2.7 36 247-284 2-39 (318)
413 2gv8_A Monooxygenase; FMO, FAD 79.0 0.84 2.9E-05 50.0 2.7 34 250-285 212-246 (447)
414 3cty_A Thioredoxin reductase; 79.0 0.86 3E-05 47.0 2.6 34 250-285 155-188 (319)
415 1nvt_A Shikimate 5'-dehydrogen 79.0 0.92 3.1E-05 46.9 2.8 32 251-285 129-160 (287)
416 1fec_A Trypanothione reductase 79.0 0.79 2.7E-05 51.1 2.5 34 250-285 187-223 (490)
417 3d1l_A Putative NADP oxidoredu 79.0 0.79 2.7E-05 46.5 2.3 33 251-285 11-44 (266)
418 3vku_A L-LDH, L-lactate dehydr 78.8 0.88 3E-05 48.3 2.6 33 250-284 9-43 (326)
419 3phh_A Shikimate dehydrogenase 78.8 1 3.6E-05 46.5 3.1 34 250-285 118-151 (269)
420 3itj_A Thioredoxin reductase 1 78.8 0.95 3.2E-05 46.6 2.8 34 250-285 173-206 (338)
421 1ldn_A L-lactate dehydrogenase 78.7 0.9 3.1E-05 47.9 2.7 34 250-285 6-41 (316)
422 1qyc_A Phenylcoumaran benzylic 78.5 1.2 4.1E-05 45.6 3.5 33 251-285 5-38 (308)
423 3enk_A UDP-glucose 4-epimerase 78.4 1.1 3.9E-05 46.5 3.3 37 247-285 2-39 (341)
424 3lad_A Dihydrolipoamide dehydr 77.9 1.1 3.7E-05 49.5 3.2 34 250-285 180-213 (476)
425 1qyd_A Pinoresinol-lariciresin 77.9 1.3 4.3E-05 45.5 3.5 33 251-285 5-38 (313)
426 1pjc_A Protein (L-alanine dehy 77.8 1.1 3.8E-05 48.0 3.1 33 251-285 168-200 (361)
427 4b4o_A Epimerase family protei 77.8 1.1 3.9E-05 45.8 3.0 31 252-284 2-33 (298)
428 2eez_A Alanine dehydrogenase; 77.6 1.2 4.2E-05 47.8 3.4 33 251-285 167-199 (369)
429 4ap3_A Steroid monooxygenase; 77.4 0.88 3E-05 51.7 2.2 34 250-285 191-224 (549)
430 3d0o_A L-LDH 1, L-lactate dehy 77.4 1 3.6E-05 47.4 2.7 34 249-284 5-40 (317)
431 1mo9_A ORF3; nucleotide bindin 77.4 1.1 3.7E-05 50.4 3.0 33 251-285 215-247 (523)
432 3ab1_A Ferredoxin--NADP reduct 77.3 1 3.5E-05 47.4 2.6 34 250-285 163-196 (360)
433 1b8p_A Protein (malate dehydro 77.3 1.1 3.6E-05 47.5 2.7 33 250-284 5-45 (329)
434 3dgh_A TRXR-1, thioredoxin red 77.3 1.1 3.9E-05 49.5 3.1 32 251-284 188-219 (483)
435 2hk9_A Shikimate dehydrogenase 76.8 1 3.5E-05 46.3 2.3 33 251-285 130-162 (275)
436 3o38_A Short chain dehydrogena 76.8 1.9 6.4E-05 43.4 4.3 34 250-285 22-57 (266)
437 2yjz_A Metalloreductase steap4 78.5 0.5 1.7E-05 46.4 0.0 33 251-285 20-52 (201)
438 3fbs_A Oxidoreductase; structu 76.7 1.3 4.5E-05 44.6 3.2 33 250-285 141-173 (297)
439 1edz_A 5,10-methylenetetrahydr 76.6 1.4 4.9E-05 46.6 3.4 33 250-284 177-210 (320)
440 1mld_A Malate dehydrogenase; o 76.5 1.4 4.8E-05 46.4 3.4 32 252-285 2-36 (314)
441 3don_A Shikimate dehydrogenase 76.5 1.2 4E-05 46.3 2.7 34 250-285 117-151 (277)
442 1np3_A Ketol-acid reductoisome 76.4 1.3 4.4E-05 47.1 3.0 33 251-285 17-49 (338)
443 3ics_A Coenzyme A-disulfide re 76.3 1.2 4.1E-05 50.6 3.0 34 250-285 187-220 (588)
444 3h5n_A MCCB protein; ubiquitin 76.3 1.2 4.1E-05 47.8 2.8 36 250-287 118-154 (353)
445 1vl6_A Malate oxidoreductase; 76.2 1.2 4E-05 48.5 2.7 34 249-284 191-225 (388)
446 3vps_A TUNA, NAD-dependent epi 76.0 1.4 4.7E-05 45.2 3.1 35 250-286 7-42 (321)
447 1xdi_A RV3303C-LPDA; reductase 76.0 1.2 4.1E-05 49.6 2.8 33 251-285 183-215 (499)
448 3vh1_A Ubiquitin-like modifier 75.9 1.4 4.7E-05 50.5 3.3 36 250-287 327-363 (598)
449 2a9f_A Putative malic enzyme ( 75.9 1.2 4.1E-05 48.4 2.7 35 249-285 187-222 (398)
450 1y8q_A Ubiquitin-like 1 activa 75.8 1.2 4E-05 47.7 2.6 36 250-287 36-72 (346)
451 1x13_A NAD(P) transhydrogenase 75.8 1.4 4.8E-05 48.1 3.2 34 250-285 172-205 (401)
452 3fbt_A Chorismate mutase and s 75.3 1.7 5.9E-05 45.1 3.6 34 250-285 122-156 (282)
453 4gsl_A Ubiquitin-like modifier 75.3 1.5 5E-05 50.4 3.3 36 250-287 326-362 (615)
454 1pjq_A CYSG, siroheme synthase 75.3 1.5 5E-05 48.7 3.3 34 250-285 12-45 (457)
455 2r6j_A Eugenol synthase 1; phe 75.3 1.7 5.7E-05 44.9 3.5 33 251-285 12-45 (318)
456 3r9u_A Thioredoxin reductase; 75.0 1.5 5.1E-05 44.6 3.1 34 250-285 147-180 (315)
457 1tt5_B Ubiquitin-activating en 75.0 1.6 5.6E-05 48.1 3.5 37 249-287 39-76 (434)
458 3u62_A Shikimate dehydrogenase 74.9 1.5 5.1E-05 44.8 3.0 32 252-285 110-142 (253)
459 3tnl_A Shikimate dehydrogenase 74.9 1.7 5.7E-05 46.0 3.4 33 250-284 154-187 (315)
460 3abi_A Putative uncharacterize 74.8 1.5 5E-05 47.0 3.0 33 249-284 15-47 (365)
461 3jyo_A Quinate/shikimate dehyd 74.8 1.6 5.5E-05 45.3 3.2 34 250-285 127-161 (283)
462 3ruf_A WBGU; rossmann fold, UD 74.7 1.3 4.5E-05 46.3 2.6 36 248-285 23-59 (351)
463 1ff9_A Saccharopine reductase; 74.6 1.7 6E-05 48.0 3.6 33 251-285 4-36 (450)
464 2d5c_A AROE, shikimate 5-dehyd 74.3 1.5 5.2E-05 44.5 2.9 32 252-285 118-149 (263)
465 3o8q_A Shikimate 5-dehydrogena 74.3 1.8 6.1E-05 44.9 3.4 34 250-285 126-160 (281)
466 2vhw_A Alanine dehydrogenase; 74.1 1.7 5.9E-05 46.8 3.4 34 250-285 168-201 (377)
467 1smk_A Malate dehydrogenase, g 74.1 1.6 5.5E-05 46.1 3.1 34 250-285 8-44 (326)
468 2ydy_A Methionine adenosyltran 73.7 1.6 5.4E-05 44.9 2.9 33 251-285 3-36 (315)
469 1l7d_A Nicotinamide nucleotide 73.6 1.7 5.9E-05 46.9 3.2 34 250-285 172-205 (384)
470 3iwa_A FAD-dependent pyridine 73.6 1.3 4.5E-05 48.8 2.3 33 250-284 159-192 (472)
471 3pwz_A Shikimate dehydrogenase 73.4 1.8 6.3E-05 44.6 3.2 34 250-285 120-154 (272)
472 3f8d_A Thioredoxin reductase ( 73.3 1.4 4.8E-05 44.9 2.3 34 250-285 154-187 (323)
473 4a9w_A Monooxygenase; baeyer-v 72.9 1.6 5.4E-05 45.2 2.6 33 250-285 163-195 (357)
474 1hyu_A AHPF, alkyl hydroperoxi 72.8 1.3 4.5E-05 49.8 2.1 34 250-285 355-388 (521)
475 1cjc_A Protein (adrenodoxin re 72.7 1.8 6E-05 48.0 3.1 36 250-285 145-199 (460)
476 2z1m_A GDP-D-mannose dehydrata 72.7 1.8 6.1E-05 44.8 3.0 33 251-285 4-37 (345)
477 2rir_A Dipicolinate synthase, 72.7 2 6.9E-05 44.6 3.4 34 250-285 157-190 (300)
478 3i6i_A Putative leucoanthocyan 72.7 1.8 6.3E-05 45.3 3.1 34 250-285 10-44 (346)
479 3c1o_A Eugenol synthase; pheny 72.7 2 6.8E-05 44.3 3.3 32 252-285 6-38 (321)
480 1y1p_A ARII, aldehyde reductas 72.5 2.1 7.3E-05 44.1 3.6 34 250-285 11-45 (342)
481 3m2p_A UDP-N-acetylglucosamine 72.3 1.9 6.6E-05 44.2 3.1 32 251-284 3-35 (311)
482 3rkr_A Short chain oxidoreduct 72.2 2 6.8E-05 43.3 3.1 34 250-285 29-63 (262)
483 3sc6_A DTDP-4-dehydrorhamnose 71.9 1.4 4.8E-05 44.6 1.9 31 251-283 6-37 (287)
484 3lzw_A Ferredoxin--NADP reduct 71.7 1.7 5.9E-05 44.5 2.6 34 250-285 154-187 (332)
485 2cvz_A Dehydrogenase, 3-hydrox 71.6 2.1 7E-05 43.6 3.1 31 252-285 3-33 (289)
486 4dna_A Probable glutathione re 71.5 1.9 6.5E-05 47.4 3.0 34 250-285 170-203 (463)
487 3o0h_A Glutathione reductase; 71.4 1.9 6.6E-05 47.7 3.0 34 250-285 191-224 (484)
488 3dqp_A Oxidoreductase YLBE; al 71.4 2.1 7E-05 41.6 2.9 32 252-285 2-34 (219)
489 2wm3_A NMRA-like family domain 71.3 1.8 6.2E-05 44.2 2.6 34 250-285 5-40 (299)
490 2vdc_G Glutamate synthase [NAD 71.2 2 6.8E-05 47.5 3.1 34 250-285 264-298 (456)
491 2d4a_B Malate dehydrogenase; a 71.1 1.6 5.5E-05 45.8 2.2 32 252-285 1-33 (308)
492 3ko8_A NAD-dependent epimerase 71.1 2 6.9E-05 43.9 2.9 32 252-285 2-34 (312)
493 2pzm_A Putative nucleotide sug 71.0 2.3 7.8E-05 44.2 3.4 34 250-285 20-54 (330)
494 3qvo_A NMRA family protein; st 70.8 2 6.8E-05 42.5 2.7 34 250-285 23-58 (236)
495 2x4g_A Nucleoside-diphosphate- 70.7 2.3 8E-05 44.0 3.3 33 251-285 14-47 (342)
496 3d4o_A Dipicolinate synthase s 70.6 2.4 8.2E-05 43.9 3.4 34 250-285 155-188 (293)
497 2x0j_A Malate dehydrogenase; o 70.4 2.3 7.8E-05 44.5 3.1 33 252-284 2-34 (294)
498 1lu9_A Methylene tetrahydromet 70.4 2.4 8E-05 43.7 3.2 33 251-285 120-153 (287)
499 4id9_A Short-chain dehydrogena 70.4 2.1 7.2E-05 44.6 2.9 34 250-285 19-53 (347)
500 2dkn_A 3-alpha-hydroxysteroid 70.4 2.1 7.2E-05 42.2 2.8 32 252-285 3-35 (255)
No 1
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=6.8e-37 Score=330.49 Aligned_cols=327 Identities=27% Similarity=0.451 Sum_probs=246.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCC------CcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPN------CDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYA 324 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G------~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~ 324 (728)
+||+|||||++||++||+|++ +| ++|+|||++.++.++|++++|++.+. ..........+|+..+++.|.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~--~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 76 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHE--RYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPY--LSDPNNPQEADWSQQTFDYLL 76 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCC--SSCCSCTHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHH--hccccCCCceEEEEECCCCCCCccccCcceeecc--cCCCchHHHHHHHHHHHHHHH
Confidence 389999999999999999999 66 89999999998899999999999983 222234467788999999998
Q ss_pred ccccc----ccccEEEcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccceeccccc
Q psy16975 325 GLLSE----NCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQK 400 (728)
Q Consensus 325 ~l~~~----~~Gv~~~~G~~~a~~~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~~~~~G~~~~~g~idp~~ll~~L~~~ 400 (728)
++... .+++....|+.++.++++ ..++.+.+.++++++++|+. .+| ....|++++++++||..++.+|++.
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~l~~~e~~-~~p-~~~~~~~~~~~~v~p~~~~~~l~~~ 151 (351)
T 3g3e_A 77 SHVHSPNAENLGLFLISGYNLFHEAIP---DPSWKDTVLGFRKLTPRELD-MFP-DYGYGWFHTSLILEGKNYLQWLTER 151 (351)
T ss_dssp TTTTSTTHHHHTEEEEEEEEEESSCCC---CCGGGGTSEEEEECCHHHHT-TCT-TCCEEEEEEEEEECHHHHHHHHHHH
T ss_pred HHhhccCCCCccEEEEEEEEEecCCcc---ccCHHHhCCCceECCHHHhc-cCC-CCceEEEecceEEcHHHHHHHHHHH
Confidence 87752 234445667766544332 34566678889999999994 588 5778888889999999999999999
Q ss_pred CCCCCCCCCCceeeEEEEEeeCceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccccccchhhhh
Q psy16975 401 DGPSNLGERPSTLSVELYHYNRDSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKSEKQCA 480 (728)
Q Consensus 401 a~~~~~G~~~~~l~v~I~e~t~~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~S~~L~~ 480 (728)
++ ++| ++|++ +++ . +++.. ....++ .||+|+ |+ |+..|++
T Consensus 152 ~~--~~G-------v~i~~-~~V----------~---------~i~~~-~~~~a~--~VV~A~-----G~---~s~~l~~ 191 (351)
T 3g3e_A 152 LT--ERG-------VKFFQ-RKV----------E---------SFEEV-AREGAD--VIVNCT-----GV---WAGALQR 191 (351)
T ss_dssp HH--HTT-------CEEEE-CCC----------C---------CHHHH-HHTTCS--EEEECC-----GG---GGGGTSC
T ss_pred HH--HCC-------CEEEE-EEe----------C---------CHHHh-hcCCCC--EEEECC-----Cc---ChHhhcC
Confidence 98 888 66666 541 1 12211 012456 999999 99 9998875
Q ss_pred hcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCceEEecccccc
Q psy16975 481 ENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLVTLGGTQDY 560 (728)
Q Consensus 481 ~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~vviGgt~e~ 560 (728)
+ .++.|+|||++.++.. ....+.+... +....+...|++|+.+ ++++|++.+.
T Consensus 192 ~----~~l~p~rg~~~~~~~~--------------------~~~~~~~~~~--~~~~~~~~~y~~p~~~-~~~iGg~~~~ 244 (351)
T 3g3e_A 192 D----PLLQPGRGQIMKVDAP--------------------WMKHFILTHD--PERGIYNSPYIIPGTQ-TVTLGGIFQL 244 (351)
T ss_dssp C----TTCEEEEEEEEEEECT--------------------TCCSEEEECC--TTTCTTCSCEEEECSS-CEEEECCCEE
T ss_pred C----CceeecCCcEEEEeCC--------------------CcceEEEecc--ccCCCCceeEEEeCCC-cEEEeeeeec
Confidence 3 6789999996421110 0000110000 0000134689999988 7999999998
Q ss_pred CcccccccccchhhhhhcccccccccccccceeeeeecccccceeeeeeccccccceeeeeeeeEEeceeEEEEEeeecc
Q psy16975 561 GNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHHVRVERDLTGAAQYLTWYPVFKVYGITSVLFVHRFKA 640 (728)
Q Consensus 561 ~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd~Rie~e~~~~~~~~~~l~~~~~~G~~~~g~~~~~~~ 640 (728)
.+++..++++..+.+++.+.+++|.|.+.++.+.|+|+||+|+|.+++.+.++..
T Consensus 245 ~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~t~D~p~~~~~ig~~------------------------- 299 (351)
T 3g3e_A 245 GNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTG------------------------- 299 (351)
T ss_dssp TCCCCSCCHHHHHHHHHHHHHHCGGGGGCEEEEEEEEEEEECSSCEEEEEEECCS-------------------------
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCccCCcEeeeeEeeCCCCCCccceeeeccCC-------------------------
Confidence 8888888999999999999999999999999999999999999966654333210
Q ss_pred cCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCccccccCCCCceeeeeeeecccc
Q psy16975 641 AGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGVTSAPGSARCAVSVFEQSHK 720 (728)
Q Consensus 641 ~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~t~s~g~A~~~~~l~~~~~~ 720 (728)
...-.||+++||+|+|+++||++|+.+++++.+.++
T Consensus 300 --------------------------------------------~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~ 335 (351)
T 3g3e_A 300 --------------------------------------------PSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILE 335 (351)
T ss_dssp --------------------------------------------SSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHH
Confidence 012348999999999999999999999999999877
Q ss_pred cc
Q psy16975 721 AS 722 (728)
Q Consensus 721 ~~ 722 (728)
+.
T Consensus 336 ~~ 337 (351)
T 3g3e_A 336 EK 337 (351)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 2
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.98 E-value=6.6e-34 Score=308.51 Aligned_cols=343 Identities=22% Similarity=0.297 Sum_probs=238.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccccc-----CCCCccccccCCCCCCCCCchhhhhhhhhccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDT-----TSDGAAGLFEPSPNFMGPDLETTKEWIRYSYD 321 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~g-----AS~~agGii~p~~~l~~~~~~~~~~~~~~s~~ 321 (728)
|.+++||+|||||++|+++||+|++ +|++|+|||++.++.+ +|.+++|.+.+.... .......++..++++
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~--~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~--~~~~~~~~~~~~~~~ 78 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILAR--KGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTL--TDGPRQAKWEESTFK 78 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCT--TTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHh--CCCEEEEEeccCCCCcCCcCcccCcccccccCcccC--CCchHHHHHHHHHHH
Confidence 5567899999999999999999999 8999999999887765 455677777763211 123467778888888
Q ss_pred ccccccccc-cccEEEcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccceeccccc
Q psy16975 322 HYAGLLSEN-CGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQK 400 (728)
Q Consensus 322 ~~~~l~~~~-~Gv~~~~G~~~a~~~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~~~~~G~~~~~g~idp~~ll~~L~~~ 400 (728)
.|.++.. + .++.+...+.++.++.+ ....++++.+.++++++++++ | ....|+++.++++||..++.+|++.
T Consensus 79 ~~~~~~~-~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~----p-~~~~g~~~~~~~v~p~~~~~~l~~~ 151 (363)
T 1c0p_A 79 KWVELVP-TGHAMWLKGTRRFAQNEDG-LLGHWYKDITPNYRPLPSSEC----P-PGAIGVTYDTLSVHAPKYCQYLARE 151 (363)
T ss_dssp HHHHHTT-TTSSEEEEEEEEEESSGGG-GGGGTTTTTSTTCEECCGGGS----S-TTCEEEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHhCc-ccCCeEEECCEEEEecCcc-chhHHHHHhCCCcEECCHHHC----C-CceEEEEEecceecHHHHHHHHHHH
Confidence 8888763 5 67765444433332222 223455667788899998876 4 3456777777999999999999999
Q ss_pred CCCCCCCCCCceeeEEEEEeeCceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccccccchhhhh
Q psy16975 401 DGPSNLGERPSTLSVELYHYNRDSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKSEKQCA 480 (728)
Q Consensus 401 a~~~~~G~~~~~l~v~I~e~t~~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~S~~L~~ 480 (728)
++ ++| ++|++ +++ ..+... . . .++ .||+|+ |. |+..|+.
T Consensus 152 ~~--~~G-------~~i~~-~~v----------~~l~~~--------~--~-~a~--~VV~A~-----G~---~s~~l~~ 190 (363)
T 1c0p_A 152 LQ--KLG-------ATFER-RTV----------TSLEQA--------F--D-GAD--LVVNAT-----GL---GAKSIAG 190 (363)
T ss_dssp HH--HTT-------CEEEE-CCC----------SBGGGT--------C--S-SCS--EEEECC-----GG---GGGTSBT
T ss_pred HH--HCC-------CEEEE-EEc----------ccHhhc--------C--c-CCC--EEEECC-----Cc---chhhccC
Confidence 98 888 77766 551 112110 1 1 455 999999 99 9998876
Q ss_pred hcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHH-HhhceeeeecCCceEEeccccc
Q psy16975 481 ENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLV-RLAGAYIIPSYGGLVTLGGTQD 559 (728)
Q Consensus 481 ~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i-~~~~~YiiP~~dG~vviGgt~e 559 (728)
.. ..+++|+|||++ .+++....+.+. .+ .....|++|+.+|++++|++.+
T Consensus 191 ~~--~~~~~p~rg~~~---------------------~~~~~~~~~~~~------~~~~~~~~y~~p~~~g~~~iG~t~~ 241 (363)
T 1c0p_A 191 ID--DQAAEPIRGQTV---------------------LVKSPCKRCTMD------SSDPASPAYIIPRPGGEVICGGTYG 241 (363)
T ss_dssp TC--CTTEEEEEEEEE---------------------EEECCCCCCEEE------CSCTTCCEEEEEETTTEEEEECCCE
T ss_pred cc--cCCccccCCeEE---------------------EEeCCcccceEe------eccCCCcEEEEEcCCCEEEEEeeec
Confidence 53 378999999964 121110011000 01 1234899999999999999999
Q ss_pred cCcccccccccchhhhhhccccccccc------ccccceeeeeecccccce-eeeeeccccccceeeeeeeeEEeceeEE
Q psy16975 560 YGNARLGVDRFDSRAILNRTAAVRPEI------LAAPVEKVWVGLRPYRHH-VRVERDLTGAAQYLTWYPVFKVYGITSV 632 (728)
Q Consensus 560 ~~~~d~~~~~~~~~~ll~~~~~l~P~L------~~~~I~~~waGlRP~tpd-~Rie~e~~~~~~~~~~l~~~~~~G~~~~ 632 (728)
..+++..++.+..+.+++++.+++|.| .+.++++.|+|+||+|+| .++..+.++.+.
T Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp~t~d~~piig~~~~~~~---------------- 305 (363)
T 1c0p_A 242 VGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPARRGGPRVEAERIVLPL---------------- 305 (363)
T ss_dssp ETCCCCSCCHHHHHHHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEEEETTSCEEEEEEEEESC----------------
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhCccccCCcccccceEeeceEEECCCCCCCceeEEEeccccc----------------
Confidence 888888888899999999999999999 568999999999999999 554332110000
Q ss_pred EEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCce-EEEEeecccCccccccCCCCceee
Q psy16975 633 LFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQT-IRIVHNYGHGGYGVTSAPGSARCA 711 (728)
Q Consensus 633 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~-~~v~h~yGhgg~G~t~s~g~A~~~ 711 (728)
....+ .. +...|+ -+..+.. -.||+++||+|.|+++||++|+.+
T Consensus 306 -----~~~~~-------------~~-d~~~~~----------------g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~ 350 (363)
T 1c0p_A 306 -----DRTKS-------------PL-SLGRGS----------------ARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDV 350 (363)
T ss_dssp -----CTTTC-------------TT-CSSCTT----------------CCCSCCEEEEEEEEECCTTCHHHHHHHHHHHH
T ss_pred -----ccccC-------------cc-cccccc----------------ccccccccceEEEecCCCCcchheeccHHHHH
Confidence 00000 00 000000 0111211 358999999999999999999999
Q ss_pred eeeeeccccc
Q psy16975 712 VSVFEQSHKA 721 (728)
Q Consensus 712 ~~l~~~~~~~ 721 (728)
++|+.+.++.
T Consensus 351 a~li~~~l~~ 360 (363)
T 1c0p_A 351 AQLVDEAFQR 360 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887653
No 3
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.97 E-value=1.5e-33 Score=303.30 Aligned_cols=300 Identities=12% Similarity=0.089 Sum_probs=211.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc-cccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK-FNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~-~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
+.++||+|||||++|+++|++|++ +|++|+|||++ .++.++|+.++|++.+.... +......+++..+.+.|.++
T Consensus 2 ~~~~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 77 (369)
T 3dme_A 2 STDIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYY--PADSLKARLCVRGKHLLYEY 77 (369)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCSTTSSSCCEECCCCSS--CTTCHHHHHHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCccCcCCccccccCccC--CCCCHhHHHHHHHHHHHHHH
Confidence 456899999999999999999999 99999999998 57889999999999875322 22234556777777777766
Q ss_pred cccccccEE-Ecccc-cccchhhhhh----cccccccchh-ccccCHHHHhhcCCC-CcceeEeEE-eeeecCccceecc
Q psy16975 327 LSENCGVQV-INGYN-LAKSEKQCAE----NHYLKPVLPV-YKRMSEEELAEIGPG-DWKYGIYMS-TLVIPNRIFLPWC 397 (728)
Q Consensus 327 ~~~~~Gv~~-~~G~~-~a~~~~~~~~----~~~~~~~g~~-~~~L~~~el~~~~P~-~~~~G~~~~-~g~idp~~ll~~L 397 (728)
.. +.++.+ ..|.+ ++.++++.+. .......+.+ +++++.+++.+++|. ....+++++ +++++|..++.+|
T Consensus 78 ~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 78 CA-ARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp HH-HHTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHH
T ss_pred HH-HcCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHH
Confidence 63 445544 34543 3443333221 1223345665 889999999998886 345567776 5899999999999
Q ss_pred cccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhh-ccccccccccccccEEEcccccccc
Q psy16975 398 MQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQ-HDHYAGLLSENCGVQVINGYNLAKS 475 (728)
Q Consensus 398 ~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~-~g~ada~~VVnAa~~viaG~~~~~S 475 (728)
++.++ ++| ++|+++++ +++...++.. +.+.+... .....++.||+|+ |. |+
T Consensus 157 ~~~~~--~~G-------v~i~~~~~v~~i~~~~~~~----------~~v~~~~g~~~~~~a~~VV~A~-----G~---~s 209 (369)
T 3dme_A 157 QGDAE--SDG-------AQLVFHTPLIAGRVRPEGG----------FELDFGGAEPMTLSCRVLINAA-----GL---HA 209 (369)
T ss_dssp HHHHH--HTT-------CEEECSCCEEEEEECTTSS----------EEEEECTTSCEEEEEEEEEECC-----GG---GH
T ss_pred HHHHH--HCC-------CEEECCCEEEEEEEcCCce----------EEEEECCCceeEEEeCEEEECC-----Cc---ch
Confidence 99998 888 89999888 4454332211 11222200 0133344999999 99 99
Q ss_pred hhhhhhc-ccc----cccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHH-HHHhhceeeeecCC
Q psy16975 476 EKQCAEN-HYL----KPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFAS-LVRLAGAYIIPSYG 549 (728)
Q Consensus 476 ~~L~~~~-gi~----lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~-~i~~~~~YiiP~~d 549 (728)
..|++.. ++. .++.|.|||++. ++. ..| +....+.. .......++.+..+
T Consensus 210 ~~l~~~~~g~~~~~~~~i~p~rG~~~~---------------------~~~--~~~-~~~~~~~~p~~~~~~~~~~~~~~ 265 (369)
T 3dme_A 210 PGLARRIEGIPRDSIPPEYLCKGSYFT---------------------LAG--RAP-FSRLIYPVPQHAGLGVHLTLDLG 265 (369)
T ss_dssp HHHHHTEETSCGGGSCCCEEEEEEEEE---------------------CSS--SCS-CSSEEEECTTCSSCCCCEEECTT
T ss_pred HHHHHHhcCCCccccceeeecceEEEE---------------------ECC--CCc-cCceeecCCCCCCceEEEeCccC
Confidence 9998877 642 468999999532 110 001 00000000 00012466777888
Q ss_pred ceEEecccccc-Ccccccccccchhhhhhcccccccccccccceeeeeecccccc
Q psy16975 550 GLVTLGGTQDY-GNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRH 603 (728)
Q Consensus 550 G~vviGgt~e~-~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tp 603 (728)
|++++|++.+. ++++..++++..+.+++.+.+++|.|.+.++.+.|+|+||.++
T Consensus 266 g~~~iG~t~e~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~ 320 (369)
T 3dme_A 266 GQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKIS 320 (369)
T ss_dssp SCEEECCCCEEESSCCCCCCGGGGGGHHHHHHTTCTTCCTTCCEEEEEEEEEESS
T ss_pred CcEEECCCcccccccccccCHHHHHHHHHHHHHHCCCCChhhceecceecccccc
Confidence 99999999987 6788899999999999999999999999999999999999985
No 4
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.3e-33 Score=307.33 Aligned_cols=332 Identities=14% Similarity=0.144 Sum_probs=240.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
|..++||+|||||++|+++|++|++ +|++|+|||++.++.++|+.++|++++.. . .....++..++.+.|.++
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~--~G~~V~lle~~~~~~gas~~~~g~~~~~~--~---~~~~~~l~~~~~~~~~~l 74 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAK--RGEEVTVIEKRFIGSGSTFRCGTGIRQQF--N---DEANVRVMKRSVELWKKY 74 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCSHHHHCCCCCCCCC--S---SHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCccccccCeeeecC--C---ChHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999 89999999999888899999999998842 1 223456666777777666
Q ss_pred cccccccEE-Eccccc-ccchhhhh----hcccccccchhccccCHHHHhhcCCC----CcceeEeEE-eeeecCcccee
Q psy16975 327 LSENCGVQV-INGYNL-AKSEKQCA----ENHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMS-TLVIPNRIFLP 395 (728)
Q Consensus 327 ~~~~~Gv~~-~~G~~~-a~~~~~~~----~~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~-~g~idp~~ll~ 395 (728)
.+ +.++.+ ..|.++ +.++++.+ ....++..+.++++++++++.+++|. ....+++++ ++++||..++.
T Consensus 75 ~~-~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (382)
T 1y56_B 75 SE-EYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATT 153 (382)
T ss_dssp HH-HHTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHH
T ss_pred HH-HhCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHH
Confidence 53 333333 445433 33333322 12333456777899999999988874 234566666 59999999999
Q ss_pred cccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEccccccc
Q psy16975 396 WCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAK 474 (728)
Q Consensus 396 ~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~ 474 (728)
+|.+.++ ++| ++|+++++ +++....+ ++.+|.+. .+...++.||+|+ |. |
T Consensus 154 ~l~~~~~--~~G-------v~i~~~~~v~~i~~~~~----------~v~gv~~~--~g~i~a~~VV~A~-----G~---~ 204 (382)
T 1y56_B 154 AFAVKAK--EYG-------AKLLEYTEVKGFLIENN----------EIKGVKTN--KGIIKTGIVVNAT-----NA---W 204 (382)
T ss_dssp HHHHHHH--HTT-------CEEECSCCEEEEEESSS----------BEEEEEET--TEEEECSEEEECC-----GG---G
T ss_pred HHHHHHH--HCC-------CEEECCceEEEEEEECC----------EEEEEEEC--CcEEECCEEEECc-----ch---h
Confidence 9999998 888 89998888 44443222 22223333 2333444999999 99 9
Q ss_pred chhhhhhcccc--cccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhc-ccchHHHHH-h-hceeeeecCC
Q psy16975 475 SEKQCAENHYL--KPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCM-QKNFASLVR-L-AGAYIIPSYG 549 (728)
Q Consensus 475 S~~L~~~~gi~--lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~-~~~~~~~i~-~-~~~YiiP~~d 549 (728)
+..|....+.. +|+.|.|||++ .+++ ..++.. + .++. . ...|++|..+
T Consensus 205 s~~l~~~~g~~~~~~~~~~~g~~~---------------------~~~~--~~~~~~~~----~~~~~~~~~~y~~p~~~ 257 (382)
T 1y56_B 205 ANLINAMAGIKTKIPIEPYKHQAV---------------------ITQP--IKRGTINP----MVISFKYGHAYLTQTFH 257 (382)
T ss_dssp HHHHHHHHTCCSCCCCEEEEEEEE---------------------EECC--CSTTSSCS----EEEESTTTTEEEECCSS
T ss_pred HHHHHHHcCCCcCcCCCeeEeEEE---------------------EEcc--CCcccCCC----eEEecCCCeEEEEEeCC
Confidence 98888777766 78999999953 1211 111111 1 0111 2 4689999999
Q ss_pred ceEEecc-c-cccCcccccccccchhhhhhcccccccccccccceeeeeecccccce--eeeeeccccccceeeeeeeeE
Q psy16975 550 GLVTLGG-T-QDYGNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWYPVFK 625 (728)
Q Consensus 550 G~vviGg-t-~e~~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l~~~~ 625 (728)
| +++|+ + .+..+++..++.+..+.+++.+.+++|.|.+.++.+.|+|+||+++| +.|...
T Consensus 258 g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~g~r~~t~d~~p~ig~~--------------- 321 (382)
T 1y56_B 258 G-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPALKNLLILRTWAGYYAKTPDSNPAIGRI--------------- 321 (382)
T ss_dssp S-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEECTTSCCEEEEE---------------
T ss_pred e-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcCCCCceEEEEeccccCCCCCcEeccC---------------
Confidence 8 99994 4 44456677788888999999999999999999999999999999999 333210
Q ss_pred EeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEe-ecCceEEEEeecccCccccccC
Q psy16975 626 VYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIP-VRGQTIRIVHNYGHGGYGVTSA 704 (728)
Q Consensus 626 ~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~-~~g~~~~v~h~yGhgg~G~t~s 704 (728)
| .+| +++++||+|.|+++|
T Consensus 322 --------------------------------------------------------~~~~~----~~~~~G~~g~G~~~a 341 (382)
T 1y56_B 322 --------------------------------------------------------EELND----YYIAAGFSGHGFMMA 341 (382)
T ss_dssp --------------------------------------------------------SSSBT----EEEEECCTTCHHHHH
T ss_pred --------------------------------------------------------CCCCC----EEEEEecCcchHhhh
Confidence 1 123 789999999999999
Q ss_pred CCCceeeeeeeecc
Q psy16975 705 PGSARCAVSVFEQS 718 (728)
Q Consensus 705 ~g~A~~~~~l~~~~ 718 (728)
|++|+.+++++.+.
T Consensus 342 ~~~g~~la~~i~~~ 355 (382)
T 1y56_B 342 PAVGEMVAELITKG 355 (382)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999764
No 5
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.97 E-value=4.9e-33 Score=301.31 Aligned_cols=332 Identities=12% Similarity=0.098 Sum_probs=234.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc-cccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK-FNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~-~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
..++||+|||||++||++||+|++ |++|+|||++ .++.++|+.++|++++.. . .....++...+.+.|.++
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~---G~~V~vlE~~~~~g~~as~~~~g~~~~~~--~---~~~~~~l~~~~~~~~~~~ 78 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSA---HGRVVVLEREAQPGYHSTGRSAAHYTVAY--G---TPQVRALTAASRAFFDNP 78 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSSSTTSSGGGSCCCEECSSS--S---CHHHHHHHHHHHHHHHSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHhC---CCCEEEEECCCCccccccccccceeeccc--C---CHHHHHHHHHHHHHHHHh
Confidence 346899999999999999999994 8999999998 578899999999998842 1 235667777777777776
Q ss_pred ccccc-c--cEEEcccccccchhhhh----hcccccccchhccccCHHHHhhcCCC-C---cceeEeEE-eeeecCccce
Q psy16975 327 LSENC-G--VQVINGYNLAKSEKQCA----ENHYLKPVLPVYKRMSEEELAEIGPG-D---WKYGIYMS-TLVIPNRIFL 394 (728)
Q Consensus 327 ~~~~~-G--v~~~~G~~~a~~~~~~~----~~~~~~~~g~~~~~L~~~el~~~~P~-~---~~~G~~~~-~g~idp~~ll 394 (728)
.+ .. + .....|.+.....++.+ ....++..+.++++++++++.+++|. . ...+++++ ++++||..++
T Consensus 79 ~~-~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~ 157 (381)
T 3nyc_A 79 PA-GFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALH 157 (381)
T ss_dssp CT-TSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHH
T ss_pred hh-hhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHH
Confidence 53 22 1 12345654322222211 12334456778899999999998886 1 34567776 5999999999
Q ss_pred ecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccccc
Q psy16975 395 PWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLA 473 (728)
Q Consensus 395 ~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~ 473 (728)
.+|++.++ ++| ++|+++++ +++....+. +.|.+. .+...++.||+|+ |.
T Consensus 158 ~~l~~~a~--~~G-------v~i~~~~~V~~i~~~~~~-----------~~V~t~--~g~i~a~~VV~A~-----G~--- 207 (381)
T 3nyc_A 158 QGYLRGIR--RNQ-------GQVLCNHEALEIRRVDGA-----------WEVRCD--AGSYRAAVLVNAA-----GA--- 207 (381)
T ss_dssp HHHHHHHH--HTT-------CEEESSCCCCEEEEETTE-----------EEEECS--SEEEEESEEEECC-----GG---
T ss_pred HHHHHHHH--HCC-------CEEEcCCEEEEEEEeCCe-----------EEEEeC--CCEEEcCEEEECC-----Ch---
Confidence 99999998 888 99999988 555543322 123333 3333444999999 99
Q ss_pred cchhhhhhcccc-cccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCceE
Q psy16975 474 KSEKQCAENHYL-KPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLV 552 (728)
Q Consensus 474 ~S~~L~~~~gi~-lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~v 552 (728)
|+..|++..++. +++.|+|||++..+... .. . ....|.+. ..+...|++|.. |++
T Consensus 208 ~s~~l~~~~g~~~~~~~p~rg~~~~~~~~~----~~---------~---~~~~p~~~-------~~~~~~y~~p~~-g~~ 263 (381)
T 3nyc_A 208 WCDAIAGLAGVRPLGLQPKRRSAFIFAPPP----GI---------D---CHDWPMLV-------SLDESFYLKPDA-GML 263 (381)
T ss_dssp GHHHHHHHHTCCCCCCEEEEEEEEEECCCT----TC---------C---CTTCCEEE-------ETTSSCEEEEET-TEE
T ss_pred hHHHHHHHhCCCCCceeeeEEEEEEECCCc----CC---------C---cCccceEE-------eCCCCEEEEeCC-CcE
Confidence 999998887754 58999999964211100 00 0 00001110 013568999998 889
Q ss_pred Eecccccc--Ccccccccccchhhhhhcccccccccccccceeeeeecccccce--eeeeeccccccceeeeeeeeEEec
Q psy16975 553 TLGGTQDY--GNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWYPVFKVYG 628 (728)
Q Consensus 553 viGgt~e~--~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l~~~~~~G 628 (728)
++|++.+. ..++..++....+.+++++.. +|.+.+.++.+.|+|+||+|+| +.|...
T Consensus 264 ~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~w~G~r~~t~D~~p~ig~~------------------ 324 (381)
T 3nyc_A 264 LGSPANADPVEAHDVQPEQLDIATGMYLIEE-ATTLTIRRPEHTWAGLRSFVADGDLVAGYA------------------ 324 (381)
T ss_dssp EEECCCCEECCSSCCCCCHHHHHHHHHHHHH-HBSCCCCCCSEEEEEEEEECTTSCCEEEEC------------------
T ss_pred EEeCCcCCCCCcccCCCChHHHHHHHHHHHh-cCCCcccceeeeeEEccccCCCCCceecCC------------------
Confidence 99999865 234555666667788888765 6888888999999999999999 333210
Q ss_pred eeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEe-ecCceEEEEeecccCccccccCCCC
Q psy16975 629 ITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIP-VRGQTIRIVHNYGHGGYGVTSAPGS 707 (728)
Q Consensus 629 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~-~~g~~~~v~h~yGhgg~G~t~s~g~ 707 (728)
| ..| ||+++||+|+|+++||++
T Consensus 325 -----------------------------------------------------~~~~~----l~~a~G~~g~G~~~ap~~ 347 (381)
T 3nyc_A 325 -----------------------------------------------------ANAEG----FFWVAAQGGYGIQTSAAM 347 (381)
T ss_dssp -----------------------------------------------------TTSTT----EEEEECCTTCTTTTHHHH
T ss_pred -----------------------------------------------------CCCCC----eEEEEcCCChhHhhCHHH
Confidence 0 122 799999999999999999
Q ss_pred ceeeeeeeecc
Q psy16975 708 ARCAVSVFEQS 718 (728)
Q Consensus 708 A~~~~~l~~~~ 718 (728)
|+.++++|.+.
T Consensus 348 g~~la~~i~g~ 358 (381)
T 3nyc_A 348 GEASAALIRHQ 358 (381)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhCC
Confidence 99999999764
No 6
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.97 E-value=1.7e-32 Score=323.36 Aligned_cols=342 Identities=17% Similarity=0.138 Sum_probs=228.7
Q ss_pred ceEEEEEEEEeeecccccCcccceeeeeEEEEEeCCCCCccccccCCceeeEEeecC-------CCCCCCccccCcceEE
Q psy16975 182 SWEVSVSVQQVTQTDEKVTPNLEIKQLNVQVTKVNPKSQTNATQNGDKKGLFFIPTQ-------SCPANPKVMGSNHKVA 254 (728)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~-------~~~~~~~~~~~~~dVv 254 (728)
.+.+..|...||+.+.++||.++. ++ +. +.++.+..+... ..+..+......+||+
T Consensus 206 ~~~t~~~~~~vr~~l~~aGf~~~~-------~~---------~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVv 268 (689)
T 3pvc_A 206 TFSTFTAAGFVRRGLQQAGFNVTK-------VK---------GF-GQKREMLTGTLPQQIHAPTAPWYHRPAATRCDDIA 268 (689)
T ss_dssp EEEESCCCHHHHHHHHHTTCEEEE-------EE---------CS-SSSCEEEEEECCSCCCCCCCGGGCCCCCSCCSSEE
T ss_pred EEEeccCcHHHHHHHHhCCeEEEe-------cc---------CC-CccccccccccccccccccCCCccCcccCCCCCEE
Confidence 555666778999999999998873 33 11 223333333221 0111111123468999
Q ss_pred EeecceechhhHHHhhhhCCCCcEEEeecc-cccccCCCCccccccCCCCCCCCCchhhhhhh----hhccccccccccc
Q psy16975 255 ILGAGIIGLSTALELQRRFPNCDVTVIADK-FNMDTTSDGAAGLFEPSPNFMGPDLETTKEWI----RYSYDHYAGLLSE 329 (728)
Q Consensus 255 VIGAGIiGLStA~~La~~~~G~~VtVIEk~-~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~----~~s~~~~~~l~~~ 329 (728)
|||||++|+++|++|++ +|++|+|||++ .++.++|+.++|++.+... .. .....++. ..+.+.|.++...
T Consensus 269 IIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~--~~-~~~~~~~~~~~~~~a~~~~~~l~~~ 343 (689)
T 3pvc_A 269 IIGGGIVSALTALALQR--RGAVVTLYCADAQPAQGASGNRQGALYPLLN--GK-NDALETFFTSAFTFARRQYDQLLEQ 343 (689)
T ss_dssp EECCSHHHHHHHHHHHT--TTCCEEEEESSSSTTCSGGGCSCEEECCCCC--SS-CSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EECCcHHHHHHHHHHHH--CCCcEEEEeCCCccccccccccCCEEecCCC--CC-ChHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999 99999999996 4778899999999998432 11 11222332 2244444444211
Q ss_pred ccccEE-Ecccc-cccchhhhhhcccccccchhcc---ccCHHHHhhcCCC-CcceeEeEE-eeeecCccceecccccCC
Q psy16975 330 NCGVQV-INGYN-LAKSEKQCAENHYLKPVLPVYK---RMSEEELAEIGPG-DWKYGIYMS-TLVIPNRIFLPWCMQKDG 402 (728)
Q Consensus 330 ~~Gv~~-~~G~~-~a~~~~~~~~~~~~~~~g~~~~---~L~~~el~~~~P~-~~~~G~~~~-~g~idp~~ll~~L~~~a~ 402 (728)
.....+ ..|.+ ++.++++.+....+...+.+.+ +++.+++.+++|. ....|++++ +++++|..++.+|++.++
T Consensus 344 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~ 423 (689)
T 3pvc_A 344 GIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMMLAQ 423 (689)
T ss_dssp TCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHHHH
Confidence 222223 34543 3444444332223333444444 8999998877663 345677777 599999999999999998
Q ss_pred CCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhcc--ccccccccccccEEEcccccccchhhh
Q psy16975 403 PSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHD--HYAGLLSENCGVQVINGYNLAKSEKQC 479 (728)
Q Consensus 403 ~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g--~ada~~VVnAa~~viaG~~~~~S~~L~ 479 (728)
+.| ++|+++++ +++...++.+ .|.+. .+ .+.++.||+|+ |. |+..+.
T Consensus 424 --~~G-------v~i~~~t~V~~l~~~~~~v-----------~V~t~--~G~~~i~Ad~VVlAt-----G~---~s~~l~ 473 (689)
T 3pvc_A 424 --QNG-------MTCHYQHELQRLKRIDSQW-----------QLTFG--QSQAAKHHATVILAT-----GH---RLPEWE 473 (689)
T ss_dssp --HTT-------CEEEESCCEEEEEECSSSE-----------EEEEC---CCCCEEESEEEECC-----GG---GTTCST
T ss_pred --hCC-------CEEEeCCeEeEEEEeCCeE-----------EEEeC--CCcEEEECCEEEECC-----Cc---chhccc
Confidence 888 89999988 4554433322 23332 22 23344999999 99 998887
Q ss_pred hhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecC--CceEEeccc
Q psy16975 480 AENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSY--GGLVTLGGT 557 (728)
Q Consensus 480 ~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~--dG~vviGgt 557 (728)
...+ +++.|+|||++ .++.......+. .+.+...|++|.. +|.+++|++
T Consensus 474 ~~~~--lpl~p~rGq~~---------------------~~~~~~~~~~l~------~v~~~~~Yl~P~~~~~g~~~iGat 524 (689)
T 3pvc_A 474 QTHH--LPLSAVRGQVS---------------------HIPTTPVLSQLQ------QVLCYDGYLTPVNPANQHHCIGAS 524 (689)
T ss_dssp TTTT--SCCEEEEEEEE---------------------EEECCTTGGGCC------SEEESSSEECCCBTTTTEEEEECC
T ss_pred cccC--CccccccCcEE---------------------EECCCCccccCC------eeEeCCceEccccCCCCeEEEEEe
Confidence 7765 78999999964 221110000011 1123348999998 899999999
Q ss_pred cccCcccccccccchhhhhhcccccccccc-----cccceeeeeecccccce
Q psy16975 558 QDYGNARLGVDRFDSRAILNRTAAVRPEIL-----AAPVEKVWVGLRPYRHH 604 (728)
Q Consensus 558 ~e~~~~d~~~~~~~~~~ll~~~~~l~P~L~-----~~~I~~~waGlRP~tpd 604 (728)
++.++++..++.+..+.+++++.+++|.+. +.++.+.|+|+||+++|
T Consensus 525 ~~~~~~d~~~~~~~~~~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~~t~D 576 (689)
T 3pvc_A 525 YQRGDIATDFRLTEQQENRERLLRCLPQVSWPQQVDVSDNQARCGVRCAIRD 576 (689)
T ss_dssp CEETBCCCCCCHHHHHHHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEEECTT
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhCCCccccccccccccceeEEEeeecCC
Confidence 999888888888899999999999999987 45678999999999999
No 7
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.96 E-value=1.2e-31 Score=315.35 Aligned_cols=405 Identities=14% Similarity=0.104 Sum_probs=257.5
Q ss_pred ceEEEEEEEEeeecccccCcccceeeeeEEEEEeCCCCCccccccCCceeeEEeecCCCC-------CCCccccCcceEE
Q psy16975 182 SWEVSVSVQQVTQTDEKVTPNLEIKQLNVQVTKVNPKSQTNATQNGDKKGLFFIPTQSCP-------ANPKVMGSNHKVA 254 (728)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~~~~-------~~~~~~~~~~dVv 254 (728)
.+.+..+...||+.+.++||.++. .+ +. +.++.+..+...... .....+...+||+
T Consensus 214 ~~~t~~~~~~vr~~L~~aGf~v~~-------~~---------~~-g~krem~~~~~~~~~~~~~~~~~~~~~~~~~~DVv 276 (676)
T 3ps9_A 214 TLATFTSAGFVRRGLQDAGFTMQK-------RK---------GF-GRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAA 276 (676)
T ss_dssp EEEESCCCHHHHHHHHHHTCEEEE-------EE---------CS-TTCCEEEEEECCSCCCCCCSCGGGCCCCCSCCEEE
T ss_pred EEEeccCcHHHHHHHHhCCeEEEe-------cc---------cc-ccchhhhheeccccccccccCCcccCccCCCCCEE
Confidence 455666778999999999998883 22 12 223333333221110 0001123458999
Q ss_pred EeecceechhhHHHhhhhCCCCcEEEeecc-cccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccccccccc-
Q psy16975 255 ILGAGIIGLSTALELQRRFPNCDVTVIADK-FNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLLSENCG- 332 (728)
Q Consensus 255 VIGAGIiGLStA~~La~~~~G~~VtVIEk~-~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~~~~~G- 332 (728)
|||||++|+++|++|++ +|++|+|||++ .++.++|+.++|++.+... . ......++...+++...++.+ +.+
T Consensus 277 IIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~~-~l~~ 350 (676)
T 3ps9_A 277 IIGGGIASALLSLALLR--RGWQVTLYCADEAPALGASGNRQGALYPLLS--K-HDEALNRFFSNAFTFARRFYD-QLPV 350 (676)
T ss_dssp EECCSHHHHHHHHHHHT--TTCEEEEEESSSSSSCSTTCCSCEEECCCCC--S-SCHHHHHHHHHHHHHHHHHHH-HCCS
T ss_pred EECCCHHHHHHHHHHHH--CCCeEEEEeCCCcccccCccCCCceecCcCC--C-CccHHHHHHHHHHHHHHHHHH-HCCC
Confidence 99999999999999999 99999999995 5778899999999998431 1 122333333322222222221 112
Q ss_pred -cEE-Ecccc-cccchhhhhhcccccccchhc---cccCHHHHhhcCCC-CcceeEeEE-eeeecCccceecccccCCCC
Q psy16975 333 -VQV-INGYN-LAKSEKQCAENHYLKPVLPVY---KRMSEEELAEIGPG-DWKYGIYMS-TLVIPNRIFLPWCMQKDGPS 404 (728)
Q Consensus 333 -v~~-~~G~~-~a~~~~~~~~~~~~~~~g~~~---~~L~~~el~~~~P~-~~~~G~~~~-~g~idp~~ll~~L~~~a~~~ 404 (728)
..+ ..|.+ +..++.+.+....+...+.+. ++++.+++.+++|. ....|++++ +++++|..++.+|.+.++
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~-- 428 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ-- 428 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH--
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHH--
Confidence 222 34543 344444332222233334443 48899988776653 345677777 699999999999999998
Q ss_pred CCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccccccchhhhhhcc
Q psy16975 405 NLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKSEKQCAENH 483 (728)
Q Consensus 405 ~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~S~~L~~~~g 483 (728)
+.| ++|+++++ +++...++.+ .|.+.. .+.+.++.||+|+ |. |+..+....+
T Consensus 429 ~~G-------v~i~~~t~V~~l~~~~~~v-----------~V~t~~-G~~i~Ad~VVlAt-----G~---~s~~l~~~~~ 481 (676)
T 3ps9_A 429 QQG-------LQIYYQYQLQNFSRKDDCW-----------LLNFAG-DQQATHSVVVLAN-----GH---QISRFSQTST 481 (676)
T ss_dssp HTT-------CEEEESCCEEEEEEETTEE-----------EEEETT-SCEEEESEEEECC-----GG---GGGCSTTTTT
T ss_pred hCC-------CEEEeCCeeeEEEEeCCeE-----------EEEECC-CCEEECCEEEECC-----Cc---chhccccccC
Confidence 888 89999988 4555443332 222220 1223334999999 99 9988877665
Q ss_pred cccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecC--CceEEeccccccC
Q psy16975 484 YLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSY--GGLVTLGGTQDYG 561 (728)
Q Consensus 484 i~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~--dG~vviGgt~e~~ 561 (728)
+|+.|+|||++ .++.......+. .+.....|++|.. +|++++|++++..
T Consensus 482 --lpl~p~rGq~~---------------------~~~~~~~~~~l~------~~l~~~~Yl~P~~~~~g~~~iG~t~~~~ 532 (676)
T 3ps9_A 482 --LPVYSVAGQVS---------------------HIPTTPELAELK------QVLCYDGYLTPQNPANQHHCIGASYHRG 532 (676)
T ss_dssp --CSCEEEEEEEE---------------------EEECCTTGGGCC------SEEESSSEECCCBTTTTEEEEECCCEET
T ss_pred --CcceeecCEEE---------------------EECCCcccccCC------ceeECCeeeccccCCCCeEEEeeccCCC
Confidence 78999999964 121110001111 1123448999998 8999999999998
Q ss_pred cccccccccchhhhhhcccccccccc-----cccceeeeeecccccce--eeeeeccccccceeeeeeeeEEeceeEEEE
Q psy16975 562 NARLGVDRFDSRAILNRTAAVRPEIL-----AAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWYPVFKVYGITSVLF 634 (728)
Q Consensus 562 ~~d~~~~~~~~~~ll~~~~~l~P~L~-----~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l~~~~~~G~~~~g~ 634 (728)
+.+..++.+..+.+++++.+++|.+. +.++.+.|+|+||+|+| +.|....
T Consensus 533 ~~d~~~~~~~~~~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~t~D~lPiiG~~p----------------------- 589 (676)
T 3ps9_A 533 SEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVP----------------------- 589 (676)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEEECTTCCCEEEEEE-----------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCccccccCcccccceEEEEeCccCCcCCccCcCC-----------------------
Confidence 88888899999999999999999986 35678999999999999 3222100
Q ss_pred EeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCccccccCCCCceeeeee
Q psy16975 635 VHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGVTSAPGSARCAVSV 714 (728)
Q Consensus 635 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~t~s~g~A~~~~~l 714 (728)
.+ .........+..+...+-+| | ..-.||+++||||.|+++||++|+.+|++
T Consensus 590 --~~--------~~~~~~y~~l~~~~~~~~~~---------------~---~~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~ 641 (676)
T 3ps9_A 590 --DY--------EATLVEYASLAEQKDEAVSA---------------P---VFDDLFMFAALGSRGLCSAPLCAEILAAQ 641 (676)
T ss_dssp --CH--------HHHHHHTTTTTSCCTTCCSC---------------C---EEEEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred --Ch--------HHHHHHHHhhhccccccccC---------------C---CCCCEeeeecccccHHHHHHHHHHHHHHH
Confidence 00 00000000110000000000 1 12358999999999999999999999999
Q ss_pred eecc
Q psy16975 715 FEQS 718 (728)
Q Consensus 715 ~~~~ 718 (728)
|.+.
T Consensus 642 i~g~ 645 (676)
T 3ps9_A 642 MSDE 645 (676)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 9653
No 8
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.96 E-value=2e-31 Score=290.18 Aligned_cols=335 Identities=13% Similarity=0.103 Sum_probs=233.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccccc--cCCCCccccccCCCCCCCCCchhhhhhhhhccccccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD--TTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLL 327 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~--gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~ 327 (728)
++||+|||||++|+++|++|++ +|++|+|||++..+. ++|..++|++++.. .. .....++..++.+.|.++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~--~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~--~~--~~~~~~l~~~~~~~~~~l~ 76 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK--QGVKTLLVDAFDPPHTNGSHHGDTRIIRHAY--GE--GREYVPLALRSQELWYELE 76 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSSCSSSSSCSSEEEECSSC--TT--CGGGHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCCCCCCCcchhhhhhh--cC--CchHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999 899999999998777 89999999988732 11 2245566677777776665
Q ss_pred ccccccE--EEccccc-ccchh--hhh-hcccccccchhccccCHHHHhhcCCC----CcceeEeEE-eeeecCccceec
Q psy16975 328 SENCGVQ--VINGYNL-AKSEK--QCA-ENHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMS-TLVIPNRIFLPW 396 (728)
Q Consensus 328 ~~~~Gv~--~~~G~~~-a~~~~--~~~-~~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~-~g~idp~~ll~~ 396 (728)
+ ..+.+ ...|++. ..+++ ..+ ....++..+.++++++++++.+++|. ....+++.+ +++++|..++.+
T Consensus 77 ~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (389)
T 2gf3_A 77 K-ETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRA 155 (389)
T ss_dssp H-HCSSCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHH
T ss_pred H-HhCCcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHH
Confidence 3 33322 2445433 32211 111 12233445677889999999888884 234566666 599999999999
Q ss_pred ccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccccccc
Q psy16975 397 CMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKS 475 (728)
Q Consensus 397 L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~S 475 (728)
|++.++ ++| ++|+++++ ++++..++.+ .+.+. .+...++.||+|+ |. |+
T Consensus 156 l~~~~~--~~G-------v~i~~~~~v~~i~~~~~~~-----------~v~~~--~g~~~a~~vV~A~-----G~---~~ 205 (389)
T 2gf3_A 156 YRELAE--ARG-------AKVLTHTRVEDFDISPDSV-----------KIETA--NGSYTADKLIVSM-----GA---WN 205 (389)
T ss_dssp HHHHHH--HTT-------CEEECSCCEEEEEECSSCE-----------EEEET--TEEEEEEEEEECC-----GG---GH
T ss_pred HHHHHH--HCC-------CEEEcCcEEEEEEecCCeE-----------EEEeC--CCEEEeCEEEEec-----Cc---cH
Confidence 999998 888 88998888 4444322211 12232 2333344999999 99 99
Q ss_pred hhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHH---hhceeeeecCCc-e
Q psy16975 476 EKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVR---LAGAYIIPSYGG-L 551 (728)
Q Consensus 476 ~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~---~~~~YiiP~~dG-~ 551 (728)
..|++..++.+|+.|.|||++. +++.. .++.....++.++. +...|++|..+| .
T Consensus 206 ~~l~~~~g~~~pl~~~rg~~~~---------------------~~~~~-~~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~ 263 (389)
T 2gf3_A 206 SKLLSKLNLDIPLQPYRQVVGF---------------------FESDE-SKYSNDIDFPGFMVEVPNGIYYGFPSFGGCG 263 (389)
T ss_dssp HHHGGGGTEECCCEEEEEEEEE---------------------ECCCH-HHHBGGGTCCEEEEEETTEEEEEECBSTTCC
T ss_pred HHHhhhhccCCceEEEEEEEEE---------------------EecCc-ccccccccCCEEEEeCCCCcEEEcCCCCCCc
Confidence 9998877666789999999642 21110 00000000000111 125799999988 8
Q ss_pred EEecccc-----ccCcccccc--cccchhhhhhcccccccccccccceeeeeecccccce--eeeeeccccccceeeeee
Q psy16975 552 VTLGGTQ-----DYGNARLGV--DRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWYP 622 (728)
Q Consensus 552 vviGgt~-----e~~~~d~~~--~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l~ 622 (728)
+++|++. ++++++..+ +++..+.+++.+.++||.+.+ ++.+.|+|+||+|+| +.|..
T Consensus 264 ~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~-~~~~~w~g~r~~t~D~~p~ig~------------- 329 (389)
T 2gf3_A 264 LKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGANG-ELKRGAVCMYTKTLDEHFIIDL------------- 329 (389)
T ss_dssp EEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGGCS-CEEEEEEEEEEECTTSCCEEEE-------------
T ss_pred EEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCCCC-CceEEEEEEeccCCCCCeEEcc-------------
Confidence 9999875 233445556 777889999999999999988 899999999999998 32221
Q ss_pred eeEEeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCccccc
Q psy16975 623 VFKVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGVT 702 (728)
Q Consensus 623 ~~~~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~t 702 (728)
..+ .-.+|+++||+|+|++
T Consensus 330 ------------------------------------------------------------~~~-~~~l~~a~G~~g~G~~ 348 (389)
T 2gf3_A 330 ------------------------------------------------------------HPE-HSNVVIAAGFSGHGFK 348 (389)
T ss_dssp ------------------------------------------------------------ETT-EEEEEEEECCTTCCGG
T ss_pred ------------------------------------------------------------CCC-CCCEEEEECCcccccc
Confidence 111 1248999999999999
Q ss_pred cCCCCceeeeeeeecc
Q psy16975 703 SAPGSARCAVSVFEQS 718 (728)
Q Consensus 703 ~s~g~A~~~~~l~~~~ 718 (728)
++|++|+.+++++.+.
T Consensus 349 ~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 349 FSSGVGEVLSQLALTG 364 (389)
T ss_dssp GHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHcCC
Confidence 9999999999998764
No 9
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.96 E-value=3e-31 Score=295.94 Aligned_cols=343 Identities=15% Similarity=0.106 Sum_probs=238.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC-CcEEEeec-ccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIAD-KFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk-~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
.++||+|||||++|+++|++|++ +| .+|+|||+ ..++.++|+.++|++.+.. . .....++...+.+.|.++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~--~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~--~---~~~~~~l~~~~~~~~~~l 94 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKV--WSGGSVLVVDAGHAPGSGDSGRSMAAFRTFF--S---STMNRLVAGSTVRLFEDA 94 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--HHCSCEEEEESSSSTTCSGGGSSCCEEECCC--S---SHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEccCCCCCCCcccCCCcEecccC--C---CHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999 78 99999999 7788899999999998842 1 234567777777777776
Q ss_pred cccccccE--E-Ecccccccchhhhh----hcccccccchhc-----ccc-----------CHHHHhhcCCCCcceeEeE
Q psy16975 327 LSENCGVQ--V-INGYNLAKSEKQCA----ENHYLKPVLPVY-----KRM-----------SEEELAEIGPGDWKYGIYM 383 (728)
Q Consensus 327 ~~~~~Gv~--~-~~G~~~a~~~~~~~----~~~~~~~~g~~~-----~~L-----------~~~el~~~~P~~~~~G~~~ 383 (728)
.. . +++ + ..|.+++.++++.+ ....+...+.++ +++ +.+++.+........++++
T Consensus 95 ~~-~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (448)
T 3axb_A 95 QR-G-GEDLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLI 172 (448)
T ss_dssp HH-T-TCCCCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHHHTCCCCCEEEEE
T ss_pred Hh-c-CcccccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHhccCCCceEEEEe
Confidence 53 3 432 2 34554444433322 123344455566 777 8888766211134556777
Q ss_pred E-eeeecCccceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEecc---ccc-c-ccCCcchhHHHHhhhcccc--
Q psy16975 384 S-TLVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGP---LHE-K-VSSGPRTCAMQRAMQHDHY-- 454 (728)
Q Consensus 384 ~-~g~idp~~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~---~v~-~-l~~~~~v~~v~t~~~~g~a-- 454 (728)
+ ++++||..++.+|++.++ ++| ++|+++++ +++...... .-. . -.++++++.|.+. .+..
T Consensus 173 ~~~~~~~~~~l~~~L~~~~~--~~G-------v~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~--~g~i~~ 241 (448)
T 3axb_A 173 RSAGFLDAEKVVDYYYRRAS--GAG-------VEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLS--DGTRVE 241 (448)
T ss_dssp SSEEECCHHHHHHHHHHHHH--HTT-------CEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEET--TSCEEE
T ss_pred CCCeEEcHHHHHHHHHHHHH--hCC-------CEEEcCCeEEEEEecccccccccccccccCCCceEEEEeC--CCEEee
Confidence 6 699999999999999998 888 99999988 445431000 000 0 0012233334443 3344
Q ss_pred ccccccccccEEEcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcc----
Q psy16975 455 AGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQ---- 530 (728)
Q Consensus 455 da~~VVnAa~~viaG~~~~~S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~---- 530 (728)
.++.||+|+ |. |+..|++..+...++.|+|||++. ++.. .+.+..
T Consensus 242 ~Ad~VV~At-----G~---~s~~l~~~~g~~~~~~p~rg~~~~---------------------~~~~--~~~~~~~~~~ 290 (448)
T 3axb_A 242 VGEKLVVAA-----GV---WSNRLLNPLGIDTFSRPKKRMVFR---------------------VSAS--TEGLRRIMRE 290 (448)
T ss_dssp EEEEEEECC-----GG---GHHHHHGGGTCCCSEEEEEEEEEE---------------------EECC--SHHHHHHHHH
T ss_pred cCCEEEECC-----Cc---CHHHHHHHcCCCCcccccceEEEE---------------------eCCc--cccccccccc
Confidence 455999999 99 999998887767889999999642 2110 000000
Q ss_pred ------cchHHHHHhhceeeeecCC-ceEEecccccc---Ccccc--cccccc-hhhhhhcccccccccccccceeeeee
Q psy16975 531 ------KNFASLVRLAGAYIIPSYG-GLVTLGGTQDY---GNARL--GVDRFD-SRAILNRTAAVRPEILAAPVEKVWVG 597 (728)
Q Consensus 531 ------~~~~~~i~~~~~YiiP~~d-G~vviGgt~e~---~~~d~--~~~~~~-~~~ll~~~~~l~P~L~~~~I~~~waG 597 (728)
..++.++.....|++|..+ |++++|++.+. .+++. .++.+. .+.+++.+.++||.|.+.++.+.|+|
T Consensus 291 ~~~~~~~~~p~~~~~~~~y~~p~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G 370 (448)
T 3axb_A 291 GDLAGAGAPPLIILPKRVLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAG 370 (448)
T ss_dssp CCTTSSSSCCEEEETTTEEEEEETTTTEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEE
T ss_pred ccccccCCCceEEcCCceEEeecCCCCeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEE
Confidence 0000011125689999998 89999999863 34455 666777 89999999999999999999999999
Q ss_pred cccc-cce--eeeeeccccccceeeeeeeeEEeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccc
Q psy16975 598 LRPY-RHH--VRVERDLTGAAQYLTWYPVFKVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTL 674 (728)
Q Consensus 598 lRP~-tpd--~Rie~e~~~~~~~~~~l~~~~~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~ 674 (728)
+||+ |+| +.|..
T Consensus 371 ~r~~~t~d~~p~ig~----------------------------------------------------------------- 385 (448)
T 3axb_A 371 HYDISFDANPVVFEP----------------------------------------------------------------- 385 (448)
T ss_dssp EEEEETTSSCEEECG-----------------------------------------------------------------
T ss_pred EeccccCCCCcEeee-----------------------------------------------------------------
Confidence 9999 999 32211
Q ss_pred cCcceEEeecCceEEEEeecccCccccccCCCCceeeeeeeecc
Q psy16975 675 CNDMHVIPVRGQTIRIVHNYGHGGYGVTSAPGSARCAVSVFEQS 718 (728)
Q Consensus 675 ~~d~~~~~~~g~~~~v~h~yGhgg~G~t~s~g~A~~~~~l~~~~ 718 (728)
.| .| ||+++||+|+||+++|++|+.+++++.+.
T Consensus 386 ------~~-~~----l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 418 (448)
T 3axb_A 386 ------WE-SG----IVVAAGTSGSGIMKSDSIGRVAAAVALGM 418 (448)
T ss_dssp ------GG-CS----EEEEECCTTCCGGGHHHHHHHHHHHHTTC
T ss_pred ------cC-CC----EEEEECCCchhHhHhHHHHHHHHHHHcCC
Confidence 01 23 79999999999999999999999998764
No 10
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.96 E-value=2.8e-31 Score=288.59 Aligned_cols=336 Identities=18% Similarity=0.185 Sum_probs=240.0
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
.+.++||+|||||++|+++|++|++ +|++|+|||++.++.++|+.++|++.+..... ......+++.++.+.|.++
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~--~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~--~~~~~~~l~~~~~~~~~~~ 89 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAK--ENKNTALFESGTMGGRTTSAAAGMLGAHAECE--ERDAFFDFAMHSQRLYKGL 89 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTTTHHHHCCCBCCGGGSCS--SCSHHHHHHHHHHHHTTTH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCCcccchhcCceeccCccCC--CCcHHHHHHHHHHHHHHHH
Confidence 3456899999999999999999999 89999999999888889999999998843211 1224566666777766654
Q ss_pred cc---cccccE--E-Ecccc-cccchhhhhhcccccccchhccccCHHHHhhcCCC---CcceeEeEE-eeeecCcccee
Q psy16975 327 LS---ENCGVQ--V-INGYN-LAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPG---DWKYGIYMS-TLVIPNRIFLP 395 (728)
Q Consensus 327 ~~---~~~Gv~--~-~~G~~-~a~~~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~---~~~~G~~~~-~g~idp~~ll~ 395 (728)
.+ ...++. + ..|.+ ++.++++.+....+.+. ..+++++.+++.+++|. ....+++++ +++++|..++.
T Consensus 90 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (382)
T 1ryi_A 90 GEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDL-DSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCK 168 (382)
T ss_dssp HHHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTS-TTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHH
T ss_pred HHHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhc-CCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHH
Confidence 42 112332 2 34543 34444333222222222 56788999999888874 234677776 59999999999
Q ss_pred cccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEccccccc
Q psy16975 396 WCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAK 474 (728)
Q Consensus 396 ~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~ 474 (728)
+|.+.++ +.| ++|+++++ +++...++ ++ .|.+. .+...++.||+|+ |. |
T Consensus 169 ~l~~~~~--~~g-------~~i~~~~~v~~i~~~~~----------~~-~v~~~--~g~~~a~~vV~A~-----G~---~ 218 (382)
T 1ryi_A 169 AYVKAAK--MLG-------AEIFEHTPVLHVERDGE----------AL-FIKTP--SGDVWANHVVVAS-----GV---W 218 (382)
T ss_dssp HHHHHHH--HTT-------CEEETTCCCCEEECSSS----------SE-EEEET--TEEEEEEEEEECC-----GG---G
T ss_pred HHHHHHH--HCC-------CEEEcCCcEEEEEEECC----------EE-EEEcC--CceEEcCEEEECC-----Ch---h
Confidence 9999998 778 88888877 34432221 11 23332 2233344999999 99 9
Q ss_pred chhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCceEEe
Q psy16975 475 SEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLVTL 554 (728)
Q Consensus 475 S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~vvi 554 (728)
+..+++..+...++.|.|||++ .++. ..+.+.. .+.....|++|..+|++++
T Consensus 219 s~~l~~~~~~~~~~~~~~g~~~---------------------~~~~--~~~~~~~-----~~~~~~~~~~p~~~g~~~v 270 (382)
T 1ryi_A 219 SGMFFKQLGLNNAFLPVKGECL---------------------SVWN--DDIPLTK-----TLYHDHCYIVPRKSGRLVV 270 (382)
T ss_dssp THHHHHHTTCCCCCEEEEEEEE---------------------EEEC--CSSCCCS-----EEEETTEEEEECTTSEEEE
T ss_pred HHHHHHhcCCCCceeccceEEE---------------------EECC--CCCCccc-----eEEcCCEEEEEcCCCeEEE
Confidence 9888887776678999999953 1111 1111111 1223468999999999999
Q ss_pred ccccccCcccccccccchhhhhhcccccccccccccceeeeeecccccce-eeeeeccccccceeeeeeeeEEeceeEEE
Q psy16975 555 GGTQDYGNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH-VRVERDLTGAAQYLTWYPVFKVYGITSVL 633 (728)
Q Consensus 555 Ggt~e~~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd-~Rie~e~~~~~~~~~~l~~~~~~G~~~~g 633 (728)
|++.+..+++..++.+..+.+++.+.+++|.+.+.++.+.|+|+||+++| ..+..
T Consensus 271 G~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~t~d~~p~ig------------------------ 326 (382)
T 1ryi_A 271 GATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIG------------------------ 326 (382)
T ss_dssp ECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEECSSSCCEEE------------------------
T ss_pred eecccccCCCCCCCHHHHHHHHHHHHHhCCCcCCCceeeEEEEecccCCCCCcEec------------------------
Confidence 99988777777788888999999999999999998999999999999998 21110
Q ss_pred EEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCccccccCCCCceeeee
Q psy16975 634 FVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGVTSAPGSARCAVS 713 (728)
Q Consensus 634 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~t~s~g~A~~~~~ 713 (728)
+..+ .-.+++++||+|.|+++||++|+.+++
T Consensus 327 ------------------------------------------------~~~~-~~~l~~~~G~~g~G~~~a~~~g~~la~ 357 (382)
T 1ryi_A 327 ------------------------------------------------RHPE-DSRILFAAGHFRNGILLAPATGALISD 357 (382)
T ss_dssp ------------------------------------------------EETT-EEEEEEEECCSSCTTTTHHHHHHHHHH
T ss_pred ------------------------------------------------cCCC-cCCEEEEEcCCcchHHHhHHHHHHHHH
Confidence 0111 124889999999999999999999999
Q ss_pred eeecc
Q psy16975 714 VFEQS 718 (728)
Q Consensus 714 l~~~~ 718 (728)
++.+.
T Consensus 358 ~i~~~ 362 (382)
T 1ryi_A 358 LIMNK 362 (382)
T ss_dssp HHTTC
T ss_pred HHhCC
Confidence 98764
No 11
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.95 E-value=2.5e-30 Score=283.01 Aligned_cols=333 Identities=13% Similarity=0.106 Sum_probs=238.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCC-CcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhccccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAG 325 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~ 325 (728)
.+.++||+|||||++|+++|++|++. +| ++|+|||++.++.++|+.++|++++.. . .....++...+.+.|.+
T Consensus 18 ~~~~~dVvIIG~G~~Gl~~A~~La~~-~G~~~V~vlE~~~~~~gas~~~~g~~~~~~--~---~~~~~~l~~~~~~~~~~ 91 (405)
T 2gag_B 18 PKKSYDAIIVGGGGHGLATAYFLAKN-HGITNVAVLEKGWLAGGNMARNTTIIRSNY--L---WDESAGIYEKSLKLWEQ 91 (405)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHH-HCCCCEEEECSSSTTCSGGGTSCCCBCCCC--S---SHHHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHh-cCCCcEEEEeCCCCCCCcccccCceeeecC--C---CHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999982 37 899999999888899999999998842 1 22345566666666666
Q ss_pred ccccccccE--E-Eccccc-ccchhhhh----hcccccccchhccccCHHHHhhcCCC---------CcceeEeEE-eee
Q psy16975 326 LLSENCGVQ--V-INGYNL-AKSEKQCA----ENHYLKPVLPVYKRMSEEELAEIGPG---------DWKYGIYMS-TLV 387 (728)
Q Consensus 326 l~~~~~Gv~--~-~~G~~~-a~~~~~~~----~~~~~~~~g~~~~~L~~~el~~~~P~---------~~~~G~~~~-~g~ 387 (728)
+.+ +.+++ + ..|.+. +.+++..+ ...+++..+..+++++.+++.+++|. ....+++++ +++
T Consensus 92 ~~~-~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 170 (405)
T 2gag_B 92 LPE-DLEYDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGI 170 (405)
T ss_dssp HHH-HTTCCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBB
T ss_pred HHH-HhCCCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCcc
Confidence 553 33433 2 345433 33333221 12334566778899999999888774 124566666 699
Q ss_pred ecCccceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEE
Q psy16975 388 IPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQV 466 (728)
Q Consensus 388 idp~~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~v 466 (728)
+||..++..|.+.++ +.| ++|+++++ +++...++ +++.+.+. .+...++.||+|+
T Consensus 171 ~~~~~~~~~l~~~~~--~~g-------~~i~~~~~v~~i~~~~~----------~~~~v~~~--~g~~~a~~vV~a~--- 226 (405)
T 2gag_B 171 AKHDHVAWAFARKAN--EMG-------VDIIQNCEVTGFIKDGE----------KVTGVKTT--RGTIHAGKVALAG--- 226 (405)
T ss_dssp CCHHHHHHHHHHHHH--HTT-------CEEECSCCEEEEEESSS----------BEEEEEET--TCCEEEEEEEECC---
T ss_pred CCHHHHHHHHHHHHH--HCC-------CEEEcCCeEEEEEEeCC----------EEEEEEeC--CceEECCEEEECC---
Confidence 999999999999998 788 88888888 44433222 22223333 2233344999999
Q ss_pred EcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHH--hhceee
Q psy16975 467 INGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVR--LAGAYI 544 (728)
Q Consensus 467 iaG~~~~~S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~--~~~~Yi 544 (728)
|. |+..+....++..|+.|.++|++ +.++ ..+.+.. ++. +...|+
T Consensus 227 --G~---~s~~l~~~~g~~~~~~~~~~~~~---------------------~~~~--~~~~~~~-----~~~~~~~~~y~ 273 (405)
T 2gag_B 227 --AG---HSSVLAEMAGFELPIQSHPLQAL---------------------VSEL--FEPVHPT-----VVMSNHIHVYV 273 (405)
T ss_dssp --GG---GHHHHHHHHTCCCCEEEEEEEEE---------------------EEEE--BCSCCCS-----EEEETTTTEEE
T ss_pred --ch---hHHHHHHHcCCCCCccccceeEE---------------------EecC--CccccCc-----eEEeCCCcEEE
Confidence 99 99888877776678889998853 1110 0011111 111 356899
Q ss_pred eecCCceEEecccccc-Ccccccccccchhhhhhcccccccccccccceeeeeecccccce--eeeeeccccccceeeee
Q psy16975 545 IPSYGGLVTLGGTQDY-GNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWY 621 (728)
Q Consensus 545 iP~~dG~vviGgt~e~-~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l 621 (728)
+|..+|++++|++.+. .+++..++.+..+.+++.+.+++|.+.+.++.+.|+|+||+++| +.+...
T Consensus 274 ~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~t~d~~p~ig~~----------- 342 (405)
T 2gag_B 274 SQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFARAHVLRTWGGIVDTTMDASPIISKT----------- 342 (405)
T ss_dssp EECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGGGGCEECEEEEEEEEEETTSCCEEEEC-----------
T ss_pred EEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCccccCCcceEEeeccccCCCCCCEeccc-----------
Confidence 9999999999998874 44566677778899999999999999999999999999999998 222110
Q ss_pred eeeEEeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCcccc
Q psy16975 622 PVFKVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGV 701 (728)
Q Consensus 622 ~~~~~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~ 701 (728)
|..| +++++||+|.|+
T Consensus 343 ------------------------------------------------------------~~~~----l~~~~G~~g~G~ 358 (405)
T 2gag_B 343 ------------------------------------------------------------PIQN----LYVNCGWGTGGF 358 (405)
T ss_dssp ------------------------------------------------------------SSBT----EEEEECCGGGCS
T ss_pred ------------------------------------------------------------CCCC----EEEEecCCCchh
Confidence 1123 789999999999
Q ss_pred ccCCCCceeeeeeeecc
Q psy16975 702 TSAPGSARCAVSVFEQS 718 (728)
Q Consensus 702 t~s~g~A~~~~~l~~~~ 718 (728)
++++++|+.+++++.+.
T Consensus 359 ~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 359 KGTPGAGFTLAHTIAND 375 (405)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhCC
Confidence 99999999999999764
No 12
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.95 E-value=7.9e-30 Score=276.21 Aligned_cols=332 Identities=14% Similarity=0.092 Sum_probs=221.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccccc--cCCCCccccccCCCCCCCCCchhhhhhhhhccccccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD--TTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLL 327 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~--gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~ 327 (728)
++||+|||||++|+++|++|++ +|++|+|||++..+. ++|..+++++.... .. .....++..++.+.|.++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~--~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~l~~~~~~~~~~l~ 75 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR--AGLNVLMTDAHMPPHQHGSHHGDTRLIRHAY--GE--GEKYVPLVLRAQMLWDELS 75 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH--TTCCEEEECSSCSSSSSSSCCSSEEEECSSC--TT--CGGGHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCCCCCCCccceeeecc--CC--CchHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999 899999999987664 34445566776521 11 1345667777777776654
Q ss_pred cccccc----EEEcccc-cccchhh-hh-hcccccccchhccccCHHHHhhcCCC----CcceeEeEE-eeeecCcccee
Q psy16975 328 SENCGV----QVINGYN-LAKSEKQ-CA-ENHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMS-TLVIPNRIFLP 395 (728)
Q Consensus 328 ~~~~Gv----~~~~G~~-~a~~~~~-~~-~~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~-~g~idp~~ll~ 395 (728)
+.++ ....|.+ ++.++.+ ++ ....++..+.++++++.+++.+++|. ....|++++ ++++||..++.
T Consensus 76 --~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~ 153 (372)
T 2uzz_A 76 --RHNEDDPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIK 153 (372)
T ss_dssp --TTCSSSCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHH
T ss_pred --HhCCCccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHH
Confidence 2333 1245543 3333222 11 12333456777899999999988874 223567776 59999999999
Q ss_pred cccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEccccccc
Q psy16975 396 WCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAK 474 (728)
Q Consensus 396 ~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~~~ 474 (728)
+|.+.++ +.| ++|+++++ +++....+.+ .+.+. .+...++.||+|+ |. |
T Consensus 154 ~l~~~~~--~~G-------~~i~~~~~V~~i~~~~~~~-----------~v~~~--~g~~~a~~vV~a~-----G~---~ 203 (372)
T 2uzz_A 154 TWIQLAK--EAG-------CAQLFNCPVTAIRHDDDGV-----------TIETA--DGEYQAKKAIVCA-----GT---W 203 (372)
T ss_dssp HHHHHHH--HTT-------CEEECSCCEEEEEECSSSE-----------EEEES--SCEEEEEEEEECC-----GG---G
T ss_pred HHHHHHH--HCC-------CEEEcCCEEEEEEEcCCEE-----------EEEEC--CCeEEcCEEEEcC-----Cc---c
Confidence 9999998 888 88998888 4444322211 23332 2333344999999 99 9
Q ss_pred chhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCceEEe
Q psy16975 475 SEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLVTL 554 (728)
Q Consensus 475 S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~vvi 554 (728)
+..|+++ +|+.|+|||++..+... .+......|.+... .......|++|+.+|.+++
T Consensus 204 s~~l~~~----l~~~p~rg~~~~~~~~~---------------~~~~~~~~p~~~~~----~~~~~~~y~~p~~~~~~~i 260 (372)
T 2uzz_A 204 VKDLLPE----LPVQPVRKVFAWYQADG---------------RYSVKNKFPAFTGE----LPNGDQYYGFPAENDALKI 260 (372)
T ss_dssp GGGTSTT----CCCEEEECCEEEECCCG---------------GGSTTTTCCEEEEE----CTTCCEEEEECCSSSCEEE
T ss_pred HHhhccc----cCceEEEEEEEEEEecc---------------ccCccccCCEEEEe----cCCCCeEEecCCCCCeEEE
Confidence 9988762 57899999853111000 00000001110000 0001247888998889999
Q ss_pred cccccc-------Ccccccccccchhhhhhcccccccccccccceeeeeecccccce--eeeeeccccccceeeeeeeeE
Q psy16975 555 GGTQDY-------GNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH--VRVERDLTGAAQYLTWYPVFK 625 (728)
Q Consensus 555 Ggt~e~-------~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd--~Rie~e~~~~~~~~~~l~~~~ 625 (728)
|++... ...+..++++..+.+++.+.++||.+. ++...|+|+||+|+| +.|..
T Consensus 261 G~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~--~~~~~~~g~r~~t~d~~p~ig~---------------- 322 (372)
T 2uzz_A 261 GKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG--CCLYGAACTYDNSPDEDFIIDT---------------- 322 (372)
T ss_dssp EESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHSCSCC--CEEEECCCEEEECTTSCCCEEE----------------
T ss_pred EecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHCCCCC--ccceeeEEeeccCCCCCeEEec----------------
Confidence 987521 112233445778889999999999997 788999999999999 32221
Q ss_pred EeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceEEEEeecccCccccccCC
Q psy16975 626 VYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIVHNYGHGGYGVTSAP 705 (728)
Q Consensus 626 ~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v~h~yGhgg~G~t~s~ 705 (728)
..+ .-.|++++||+|+|++++|
T Consensus 323 ---------------------------------------------------------~~~-~~~l~~~~G~~g~G~~~ap 344 (372)
T 2uzz_A 323 ---------------------------------------------------------LPG-HDNTLLITGLSGHGFKFAS 344 (372)
T ss_dssp ---------------------------------------------------------ETT-EEEEEEECCCCSCCGGGHH
T ss_pred ---------------------------------------------------------CCC-CCCEEEEeCCCccchhccH
Confidence 111 1248999999999999999
Q ss_pred CCceeeeeeeecc
Q psy16975 706 GSARCAVSVFEQS 718 (728)
Q Consensus 706 g~A~~~~~l~~~~ 718 (728)
++|+.++++|.+.
T Consensus 345 ~~g~~la~~i~~~ 357 (372)
T 2uzz_A 345 VLGEIAADFAQDK 357 (372)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999764
No 13
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.94 E-value=6e-28 Score=266.68 Aligned_cols=323 Identities=12% Similarity=0.077 Sum_probs=207.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccc-cc-cCCCCCCCCCchhhhhhhhhcccccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAG-LF-EPSPNFMGPDLETTKEWIRYSYDHYAGL 326 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agG-ii-~p~~~l~~~~~~~~~~~~~~s~~~~~~l 326 (728)
..+||+|||||++|+++|++|++..+|++|+|||++.++.++|+.++| .+ .+.. ... . ..++...+++.|.+.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~--~~~--~-~~~l~~~~~~~~~~~ 109 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQD--IPA--G-QEAQAEWTREQLLGA 109 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGG--CCT--T-CHHHHHHHHHHHHTG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeeccc--CCc--h-HHHHHHHHHHHHHHH
Confidence 458999999999999999999992229999999999888888888888 34 4421 111 1 455666666666552
Q ss_pred ccccc--ccEE-EcccccccchhhhhhcccccccchhccccCHHHHhhcCCC--------CcceeEeEE-eeeecCccce
Q psy16975 327 LSENC--GVQV-INGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPG--------DWKYGIYMS-TLVIPNRIFL 394 (728)
Q Consensus 327 ~~~~~--Gv~~-~~G~~~a~~~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~--------~~~~G~~~~-~g~idp~~ll 394 (728)
.. . ...+ ..|++... ..++..+ +++.+++.+++|. ....+++++ ++++||..++
T Consensus 110 ~~--~~~~~~~~~~g~l~~~--------~~~~~~g----~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~ 175 (405)
T 3c4n_A 110 LG--SGKTLEVEDRPLLHLL--------PAGEGSG----LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLA 175 (405)
T ss_dssp GG--SSCCCCEEECCEEEEE--------SSCCSSS----CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHH
T ss_pred hC--CCCCCcEEeeCeEEeh--------hhHhHCC----CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHH
Confidence 11 1 1122 34443211 1112222 5666666655541 234566666 5999999999
Q ss_pred ecccccCCCCCCCCCCceeeEEEEEeeCceeEEEeccccc-ccc-CCcchhHHHHhhhccccccccccccccEEEccccc
Q psy16975 395 PWCMQKDGPSNLGERPSTLSVELYHYNRDSLTVVRGPLHE-KVS-SGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNL 472 (728)
Q Consensus 395 ~~L~~~a~~~~~G~~~~~l~v~I~e~t~~~V~~~~g~~v~-~l~-~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~~ 472 (728)
.+|++.++ ++| ++|+++++ |....|.+.. .+. +++++ .|.+. .+...++.||+|+ |.
T Consensus 176 ~~L~~~~~--~~G-------v~i~~~~~--v~~~~g~~~~~~i~~~~~~v-~v~~~--~g~i~a~~VV~A~-----G~-- 234 (405)
T 3c4n_A 176 LLAAQQAI--GQG-------AGLLLNTR--AELVPGGVRLHRLTVTNTHQ-IVVHE--TRQIRAGVIIVAA-----GA-- 234 (405)
T ss_dssp HHHHHHHH--TTT-------CEEECSCE--EEEETTEEEEECBCC--------CBC--CEEEEEEEEEECC-----GG--
T ss_pred HHHHHHHH--HCC-------CEEEcCCE--EEeccccccccceEeeCCeE-EEEEC--CcEEECCEEEECC-----Cc--
Confidence 99999998 888 88888776 1100000000 122 22233 45444 3344444999999 99
Q ss_pred ccchhhhh-hcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCce
Q psy16975 473 AKSEKQCA-ENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGL 551 (728)
Q Consensus 473 ~~S~~L~~-~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~ 551 (728)
|+..|.+ ..++..++.|++||++ .++. ....... ++.+...|++|..+|.
T Consensus 235 -~s~~l~~~~~g~~~~~~~~~g~~~---------------------~~~~--~~~~~~~-----~~~~~~~y~~p~~~g~ 285 (405)
T 3c4n_A 235 -AGPALVEQGLGLHTRHGRAYRQFP---------------------RLDL--LSGAQTP-----VLRASGLTLRPQNGGY 285 (405)
T ss_dssp -GHHHHHHHHHCCCCCCEEEEEECC---------------------EECS--CCCTTCC-----EEEETTEEEEEETTEE
T ss_pred -cHHHHHHHhcCCCCCcccceeEEE---------------------EECC--CCccCCC-----eEECCcEEEEEcCCCe
Confidence 9988888 7776678899999964 1210 0001111 2224578999999999
Q ss_pred EEeccccc--cCcccc----------cccccchhhhhhccccccccccccc---------ceeeeeecccccce--eeee
Q psy16975 552 VTLGGTQD--YGNARL----------GVDRFDSRAILNRTAAVRPEILAAP---------VEKVWVGLRPYRHH--VRVE 608 (728)
Q Consensus 552 vviGgt~e--~~~~d~----------~~~~~~~~~ll~~~~~l~P~L~~~~---------I~~~waGlRP~tpd--~Rie 608 (728)
+++|++.. ..+++. ..+.+..+.+++.+ ++||.|.+.+ +.+.|+|+||+|+| +.|.
T Consensus 286 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~t~D~~P~ig 364 (405)
T 3c4n_A 286 TLVPAIHHRDPHGYHPAGGSLTGVPTGLRRELLEDLVGLM-DAVPALAGEGLELGRSSADVPGAWLALPGGRPDAPPQAE 364 (405)
T ss_dssp EEECCCCSCBCSSCCCCCCCBTTBCCSSCHHHHHHHHHHT-TTCGGGGSSCBCCCSSGGGSCEEEEEEGGGCTTCCCEEE
T ss_pred EEEeccccccccCcCcccccccccccCCCHHHHHHHHHHH-HhCCCccccCccccccccceeeEEEeecCcCCCCCCEec
Confidence 99999853 333442 12233455555443 8999998765 88999999999999 2221
Q ss_pred eccccccceeeeeeeeEEeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcceEEeecCceE
Q psy16975 609 RDLTGAAQYLTWYPVFKVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVRGQTI 688 (728)
Q Consensus 609 ~e~~~~~~~~~~l~~~~~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~ 688 (728)
. .| .|
T Consensus 365 ~-----------------------------------------------------------------------~~-~g--- 369 (405)
T 3c4n_A 365 E-----------------------------------------------------------------------LA-PG--- 369 (405)
T ss_dssp E-----------------------------------------------------------------------EE-TT---
T ss_pred c-----------------------------------------------------------------------cC-CC---
Confidence 1 02 23
Q ss_pred EEEeecccCccccccCCCCceeeeeeeecc
Q psy16975 689 RIVHNYGHGGYGVTSAPGSARCAVSVFEQS 718 (728)
Q Consensus 689 ~v~h~yGhgg~G~t~s~g~A~~~~~l~~~~ 718 (728)
+|+++||+|. ++++|++|+.++++|.+.
T Consensus 370 -l~~a~G~~g~-~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 370 -LHLLLGGPLA-DTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp -EEEEECCTTH-HHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEccCcH-HHHHHHHHHHHHHHHhCc
Confidence 7899999886 499999999999998764
No 14
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.93 E-value=1.1e-27 Score=262.44 Aligned_cols=295 Identities=13% Similarity=0.018 Sum_probs=197.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccc--cCCCCccccccCCCCCCCCCchhhhhhhhhccccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD--TTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAG 325 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~--gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~ 325 (728)
..++||+|||||++|+++|++|++ +|++|+|||+...+. ++|+.+++++.... . .....++..++++.|.+
T Consensus 2 ~~~~DVvIIGaG~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~ 74 (397)
T 2oln_A 2 TESYDVVVVGGGPVGLATAWQVAE--RGHRVLVLERHTFFNENGGTSGAERHWRLQY--T---QEDLFRLTLETLPLWRA 74 (397)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTCSSSSCCSSEEEECSCC--S---SHHHHHHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCCCCCCCcCeEEEecc--C---cchhhhHHHHHHHHHHH
Confidence 346899999999999999999999 899999999987765 78888888876531 1 12455566666666666
Q ss_pred ccccccccE--EEccccc-ccchh-----hhh-hcccccccchhccccCHHHHhhcCCC----CcceeEeEE-eeeecCc
Q psy16975 326 LLSENCGVQ--VINGYNL-AKSEK-----QCA-ENHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMS-TLVIPNR 391 (728)
Q Consensus 326 l~~~~~Gv~--~~~G~~~-a~~~~-----~~~-~~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~-~g~idp~ 391 (728)
+.+ +.+.. ...|.+. +.++. ... ...++...+.++++++.+++.+.+|. ....+++.+ +++++|.
T Consensus 75 l~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~ 153 (397)
T 2oln_A 75 LES-RCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVR 153 (397)
T ss_dssp HHH-HHTCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHH
T ss_pred HHH-HhCccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHH
Confidence 542 23322 2445432 32221 111 11233445667788899988877774 234566666 5899999
Q ss_pred cceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEccc
Q psy16975 392 IFLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGY 470 (728)
Q Consensus 392 ~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~ 470 (728)
.++.+|++.++ +.| ++|+++++ +++....+.+ .+.+. .+.+.++.||+|+ |.
T Consensus 154 ~~~~~l~~~a~--~~G-------v~i~~~~~V~~i~~~~~~v-----------~v~t~--~g~i~a~~VV~A~-----G~ 206 (397)
T 2oln_A 154 GTLAALFTLAQ--AAG-------ATLRAGETVTELVPDADGV-----------SVTTD--RGTYRAGKVVLAC-----GP 206 (397)
T ss_dssp HHHHHHHHHHH--HTT-------CEEEESCCEEEEEEETTEE-----------EEEES--SCEEEEEEEEECC-----GG
T ss_pred HHHHHHHHHHH--HcC-------CEEECCCEEEEEEEcCCeE-----------EEEEC--CCEEEcCEEEEcC-----Cc
Confidence 99999999998 778 89999988 4554332221 12222 2333444999999 99
Q ss_pred ccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhh-----ceeee
Q psy16975 471 NLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLA-----GAYII 545 (728)
Q Consensus 471 ~~~~S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~-----~~Yii 545 (728)
|+..+++..++.+|+.|.|++++..+... .....|.+.. .-... ..|++
T Consensus 207 ---~s~~l~~~~g~~~p~~~~~~~~~~~~~~~------------------~~~~~p~~~~-----~~~~~~~~~~~~y~~ 260 (397)
T 2oln_A 207 ---YTNDLLEPLGARLAYSVYEMAIAAYRQAT------------------PVTEAPFWFA-----FQQPTPQDTNLFYGF 260 (397)
T ss_dssp ---GHHHHHGGGTCCCCEEEEEEEEEEEEBCS------------------CCSCCCEEEE-----ECCCCSSSCCCEEEC
T ss_pred ---ChHHHhhhcCCCCCeeEEEEEEEEEeecC------------------cccCCCEEEE-----ecCCCCcccceEEEC
Confidence 98888888776788999999864211000 0001111100 00011 57999
Q ss_pred ecCCc----eEEeccccc------cCcccccccccchhhhhhcccccccccccccceeeeeeccc--ccce
Q psy16975 546 PSYGG----LVTLGGTQD------YGNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRP--YRHH 604 (728)
Q Consensus 546 P~~dG----~vviGgt~e------~~~~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP--~tpd 604 (728)
|..++ ++++|++.. +++.+..++++..+.+++.+.++||.|.. ++.+.|+|+|+ +|+|
T Consensus 261 p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~-~~~~~~~g~~~~p~t~D 330 (397)
T 2oln_A 261 GHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHLPTVDP-DPVRTSTCLAVLPTDPE 330 (397)
T ss_dssp CCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHCTTBCS-SCSEEEEEEEEEESSTT
T ss_pred CCCCCCCCceEEEEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhCCCCCC-CceeEEEEEecCCcCCC
Confidence 98765 799997763 22334556677888999999999999987 78899999987 9999
No 15
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.92 E-value=8.8e-27 Score=280.08 Aligned_cols=300 Identities=18% Similarity=0.195 Sum_probs=202.3
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc--ccCCCCccccccCCCCCCCCCchhhhhhhhhcccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM--DTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYA 324 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g--~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~ 324 (728)
+.++||+|||||++|+++||+|++ +|+ +|+|||++..+ .++|+.++|++.+.. ......++...+.+.|.
T Consensus 2 ~~~~dVvIIGgGi~Gls~A~~La~--~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~-----~~~~~~~l~~~s~~~~~ 74 (830)
T 1pj5_A 2 ASTPRIVIIGAGIVGTNLADELVT--RGWNNITVLDQGPLNMPGGSTSHAPGLVFQTN-----PSKTMASFAKYTVEKLL 74 (830)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSCTTCCCSGGGTCCCEECCCC-----SCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEeCCCCCCCcccceeCCceeecCC-----CCHHHHHHHHHHHHHHH
Confidence 456899999999999999999999 898 99999998753 467777888886631 12345566677777777
Q ss_pred cccccccccE-E-Eccc-ccccchhhhhh----cccccccchhccccCHHHHhhcCCC----CcceeEeEE-eeeecCcc
Q psy16975 325 GLLSENCGVQ-V-INGY-NLAKSEKQCAE----NHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMS-TLVIPNRI 392 (728)
Q Consensus 325 ~l~~~~~Gv~-~-~~G~-~~a~~~~~~~~----~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~-~g~idp~~ 392 (728)
++.+ .+.. + ..|. .++.+++..+. ...++..+.++++++++++.+++|. ....|++++ ++++||..
T Consensus 75 ~l~~--~~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~ 152 (830)
T 1pj5_A 75 SLTE--DGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAAR 152 (830)
T ss_dssp HCEE--TTEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHH
T ss_pred HHHh--hCCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHH
Confidence 6642 2222 2 4454 44444443221 2334456778899999999998885 234677776 59999999
Q ss_pred ceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhhhccccccccccccccEEEcccc
Q psy16975 393 FLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYN 471 (728)
Q Consensus 393 ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g~ada~~VVnAa~~viaG~~ 471 (728)
++.+|++.++ ++| ++|+++++ +++...++. ++.|.+. .+...++.||+|+ |.
T Consensus 153 l~~~L~~~a~--~~G-------v~i~~~t~V~~i~~~~~~----------v~~V~t~--~G~i~Ad~VV~Aa-----G~- 205 (830)
T 1pj5_A 153 AVQLLIKRTE--SAG-------VTYRGSTTVTGIEQSGGR----------VTGVQTA--DGVIPADIVVSCA-----GF- 205 (830)
T ss_dssp HHHHHHHHHH--HTT-------CEEECSCCEEEEEEETTE----------EEEEEET--TEEEECSEEEECC-----GG-
T ss_pred HHHHHHHHHH--HcC-------CEEECCceEEEEEEeCCE----------EEEEEEC--CcEEECCEEEECC-----cc-
Confidence 9999999998 888 99999988 455433222 2223333 3333444999999 99
Q ss_pred cccchhhhhhcccccccchhccccCHHHHh-hcCCCCcceeEeEEeeeec-CccccchhcccchHHHHHhhceeeeecCC
Q psy16975 472 LAKSEKQCAENHYLKPVLPVYKRMSEEELA-EIGPGDWKYGIYMSTLVIP-NRIFLPWCMQKNFASLVRLAGAYIIPSYG 549 (728)
Q Consensus 472 ~~~S~~L~~~~gi~lpv~PvRGQl~~~el~-~~~p~~w~~G~~~~Tlvve-~~~~~P~l~~~~~~~~i~~~~~YiiP~~d 549 (728)
|+..+....++.+|+.|++||++.++.. .... . ... .....|.+.. .+...|++|..+
T Consensus 206 --~s~~l~~~~g~~~pl~p~~g~~~~~~~~~~~~~--~---------~~~~~~~~~pv~~~-------~~~~~y~r~~~~ 265 (830)
T 1pj5_A 206 --WGAKIGAMIGMAVPLLPLAHQYVKTTPVPAQQG--R---------NDQPNGARLPILRH-------QDQDLYYREHGD 265 (830)
T ss_dssp --GHHHHHHTTTCCCCCEEEEEEEEEESCCGGGTT--T---------SCTTTCCCSCEEEE-------GGGTEEEEEETT
T ss_pred --chHHHHHHhCCCccceeceeEEEEEecCccccc--c---------cccccCCCCCeEEc-------CCCCEEEEEeCC
Confidence 9998887777778999999996421100 0000 0 000 0000111110 134678998876
Q ss_pred ceEEecccccc---------Cc------------ccccccccchhhhhhcccccccccccccceeeeeecccccce
Q psy16975 550 GLVTLGGTQDY---------GN------------ARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYRHH 604 (728)
Q Consensus 550 G~vviGgt~e~---------~~------------~d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~tpd 604 (728)
.+++|++... .. .+..++.+..+.+++.+.+++|.|.+.++.+.|+|+||+|+|
T Consensus 266 -~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~t~D 340 (830)
T 1pj5_A 266 -RYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAWEATKQLLPALADSEIEDGFNGIFSFTPD 340 (830)
T ss_dssp -EEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHHHHHHHHHHHHCGGGGGSCEEEEEEEEEEECTT
T ss_pred -eEEEeccCCCCcccCcccccccccccccccccccccCCCHHHHHHHHHHHHHhCccccccCcceEEEeecccCCC
Confidence 6888887421 00 123345566788999999999999999999999999999999
No 16
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.92 E-value=1.1e-26 Score=264.08 Aligned_cols=298 Identities=12% Similarity=0.065 Sum_probs=193.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLLS 328 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~~ 328 (728)
..+||+|||||++|+++|++|++ +|++|+|||++.++.++|++++|++++..... .....++.+++++.+..+.+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~--~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~---~~~~~~l~~~~~~~~~~l~~ 76 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAG--RGLSVLMLEAQDLACATSSASSKLIHGGLRYL---EHYEFRLVSEALAEREVLLK 76 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCSGGGSSCCEECCCGGGG---GGTCHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCCEEEEECCCCCCCccccccccccccchhh---hhchHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999 89999999999888999999999998732111 11223444444444433321
Q ss_pred cccccEEEcccccccchh-----hhhh-cccccccchhccccCHHHHhhcC--CC---CcceeEeEEeeeecCccceecc
Q psy16975 329 ENCGVQVINGYNLAKSEK-----QCAE-NHYLKPVLPVYKRMSEEELAEIG--PG---DWKYGIYMSTLVIPNRIFLPWC 397 (728)
Q Consensus 329 ~~~Gv~~~~G~~~a~~~~-----~~~~-~~~~~~~g~~~~~L~~~el~~~~--P~---~~~~G~~~~~g~idp~~ll~~L 397 (728)
....+....++.+..+.. .... ...+...+ ..++++++++.+++ |. ....|++++++++||..++.+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l 155 (501)
T 2qcu_A 77 MAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG-KRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLAN 155 (501)
T ss_dssp HCTTTEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS-CCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHH
T ss_pred hCCccccccCeEeccCcccchHHHHHHHHHHHHhcC-CcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHH
Confidence 000111111211111100 0000 01111112 57888888888777 75 2456777778999999999999
Q ss_pred cccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHH---hhhc-cccccccccccccEEEccccc
Q psy16975 398 MQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQR---AMQH-DHYAGLLSENCGVQVINGYNL 472 (728)
Q Consensus 398 ~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t---~~~~-g~ada~~VVnAa~~viaG~~~ 472 (728)
++.+. ++| ++|+++++ +++...+ .. +++.+ ..+. ....++.||||+ |.
T Consensus 156 ~~~a~--~~G-------v~i~~~~~V~~l~~~~-~~----------~~V~~~d~~~G~~~~i~A~~VV~At-----G~-- 208 (501)
T 2qcu_A 156 AQMVV--RKG-------GEVLTRTRATSARREN-GL----------WIVEAEDIDTGKKYSWQARGLVNAT-----GP-- 208 (501)
T ss_dssp HHHHH--HTT-------CEEECSEEEEEEEEET-TE----------EEEEEEETTTCCEEEEEESCEEECC-----GG--
T ss_pred HHHHH--HcC-------CEEEcCcEEEEEEEeC-CE----------EEEEEEECCCCCEEEEECCEEEECC-----Ch--
Confidence 99998 888 89999888 4554332 11 11211 1000 123444999999 99
Q ss_pred ccchhhhhh-ccc--ccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCC
Q psy16975 473 AKSEKQCAE-NHY--LKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYG 549 (728)
Q Consensus 473 ~~S~~L~~~-~gi--~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~d 549 (728)
|+..+.+. .+. ..++.|.||+.+ +++. ..+......++ .......|++|..+
T Consensus 209 -~s~~l~~~~l~~~~~~~i~p~rG~~~---------------------~~~~--~~~~~~~~~~~-~~dg~~~~~~P~~~ 263 (501)
T 2qcu_A 209 -WVKQFFDDGMHLPSPYGIRLIKGSHI---------------------VVPR--VHTQKQAYILQ-NEDKRIVFVIPWMD 263 (501)
T ss_dssp -GHHHHHHHHTCCCCSSCBCCEEEEEE---------------------EEEC--SSSCSCEEEEE-CTTSCEEEEEEETT
T ss_pred -hHHHHHHHhccCCcccccccceeEEE---------------------EECC--CCCCceEEEee-cCCCCEEEEEEcCC
Confidence 99888764 331 257899999953 2210 00100000000 00123579999998
Q ss_pred ceEEecccccc---Ccccccccccchhhhhhccccccc-ccccccceeeeeecccccce
Q psy16975 550 GLVTLGGTQDY---GNARLGVDRFDSRAILNRTAAVRP-EILAAPVEKVWVGLRPYRHH 604 (728)
Q Consensus 550 G~vviGgt~e~---~~~d~~~~~~~~~~ll~~~~~l~P-~L~~~~I~~~waGlRP~tpd 604 (728)
|.+++|+|.+. +.++..++++..+.+++.+.++|| .|...+|+..|+|+||.++|
T Consensus 264 g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~~~d 322 (501)
T 2qcu_A 264 EFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDD 322 (501)
T ss_dssp TEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHHBSSCCCGGGCCEEEEEEECCBCC
T ss_pred CcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEEEEEEeeecCC
Confidence 99999999765 345677888899999999999999 89999999999999999998
No 17
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.92 E-value=4.4e-26 Score=253.20 Aligned_cols=335 Identities=14% Similarity=0.150 Sum_probs=211.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCC-cEEEeecccccccCCC--CccccccCCCCCCCCCchhhh------hhhh
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNMDTTSD--GAAGLFEPSPNFMGPDLETTK------EWIR 317 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g~gAS~--~agGii~p~~~l~~~~~~~~~------~~~~ 317 (728)
|+.++||+|||||++||++|++|++ +|+ +|+|||++..+.+.|. ..+.++... ... .... ++..
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~--~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~l~~ 75 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLAR--RGYTNVTVLDPYPVPSAISAGNDVNKVISSG--QYS---NNKDEIEVNEILAE 75 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSCSSCTTCTTCSSCEEECCC--CSC---CCHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHH--cCCCcEEEEeCCCCCCCCccCCCCccEEEec--cCC---chhhhcchhHHHHH
Confidence 3456899999999999999999999 899 9999999876554433 223333331 111 2344 6677
Q ss_pred hcccccccccccccccEE-Eccccc-ccchhhhhhc-ccc-cccchhc-cccCHHHHhhcCCC-----Ccce--eEeEE-
Q psy16975 318 YSYDHYAGLLSENCGVQV-INGYNL-AKSEKQCAEN-HYL-KPVLPVY-KRMSEEELAEIGPG-----DWKY--GIYMS- 384 (728)
Q Consensus 318 ~s~~~~~~l~~~~~Gv~~-~~G~~~-a~~~~~~~~~-~~~-~~~g~~~-~~L~~~el~~~~P~-----~~~~--G~~~~- 384 (728)
++++.|.++. .....+ ..|.+. +.++...+.. ..+ ...+.++ ++++.+++.+++|. .+.. |++++
T Consensus 76 ~~~~~~~~~~--~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~ 153 (438)
T 3dje_A 76 EAFNGWKNDP--LFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARS 153 (438)
T ss_dssp HHHHHHHHCT--TTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESS
T ss_pred HHHHHHhhCc--cccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCC
Confidence 7777666542 111222 445433 3333332211 111 1345555 78899999988883 2334 67766
Q ss_pred e-eeecCccceecccccCCCCCCCCCCceeeEEEEEee---C-ceeEEEeccccccccCCcchhHHHHhhhcc-cccccc
Q psy16975 385 T-LVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYN---R-DSLTVVRGPLHEKVSSGPRTCAMQRAMQHD-HYAGLL 458 (728)
Q Consensus 385 ~-g~idp~~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t---~-~~V~~~~g~~v~~l~~~~~v~~v~t~~~~g-~ada~~ 458 (728)
+ ++++|..++.+|.+.++ ++| ++|++++ + +++...++. +.+|.+. .+ .+.++.
T Consensus 154 ~~g~~~~~~~~~~L~~~a~--~~G-------v~i~~~t~~~~V~~i~~~~~~----------v~gV~t~--~G~~i~Ad~ 212 (438)
T 3dje_A 154 GAGWAHARNALVAAAREAQ--RMG-------VKFVTGTPQGRVVTLIFENND----------VKGAVTA--DGKIWRAER 212 (438)
T ss_dssp SCEEECHHHHHHHHHHHHH--HTT-------CEEEESTTTTCEEEEEEETTE----------EEEEEET--TTEEEECSE
T ss_pred CCEEecHHHHHHHHHHHHH--hcC-------CEEEeCCcCceEEEEEecCCe----------EEEEEEC--CCCEEECCE
Confidence 6 89999999999999998 888 9999998 6 444433222 2234443 33 334449
Q ss_pred ccccccEEEcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHH-
Q psy16975 459 SENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLV- 537 (728)
Q Consensus 459 VVnAa~~viaG~~~~~S~~L~~~~gi~lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i- 537 (728)
||+|+ |. |+..|++ .+ .++.|.++++. ++.+.......+ .. .+.+.
T Consensus 213 VV~At-----G~---~s~~l~~-l~--~~~~p~~~~~~-------------------~~~l~~~~~~~~-~~--~p~~~~ 259 (438)
T 3dje_A 213 TFLCA-----GA---SAGQFLD-FK--NQLRPTAWTLV-------------------HIALKPEERALY-KN--IPVIFN 259 (438)
T ss_dssp EEECC-----GG---GGGGTSC-CT--TCCEEEEEEEE-------------------EEECCGGGHHHH-TT--CCEEEE
T ss_pred EEECC-----CC---ChhhhcC-cc--cceeeEEEEEE-------------------EEEcChHHhhhh-cC--CCEEEE
Confidence 99999 99 9998876 33 45677655432 111100000000 00 00011
Q ss_pred HhhceeeeecCC-ceEEec----cccccCc------c-----cccccccchhhhhhcccccccccccccceeeeeecccc
Q psy16975 538 RLAGAYIIPSYG-GLVTLG----GTQDYGN------A-----RLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPY 601 (728)
Q Consensus 538 ~~~~~YiiP~~d-G~vviG----gt~e~~~------~-----d~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~ 601 (728)
.+...|+.|..+ +.+++| |...... . +...+.+..+.+.+.+.++||.|.+.++.+.|+|+||+
T Consensus 260 ~~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~g~~~~ 339 (438)
T 3dje_A 260 IERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQIPKEAETRVRALLKETMPQLADRPFSFARICWCAD 339 (438)
T ss_dssp TTTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEECCCCCSSCBHHHHHHHHHHHHHHCGGGTTCCCSEEEEEEEEE
T ss_pred CCCceecCCCCCCCeEEEEeCCCCccCCccCCCcccccCCcccccCCHHHHHHHHHHHHHhCcccccCCcceeeEEEeCc
Confidence 134567778744 557774 2211100 0 12334456788999999999999999999999999999
Q ss_pred cce--eeeeeccccccceeeeeeeeEEeceeEEEEEeeecccCccchhhhhhhhhcccccccceeeccccccccccCcce
Q psy16975 602 RHH--VRVERDLTGAAQYLTWYPVFKVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMH 679 (728)
Q Consensus 602 tpd--~Rie~e~~~~~~~~~~l~~~~~~G~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~d~~ 679 (728)
|+| +.|...
T Consensus 340 t~D~~piig~~--------------------------------------------------------------------- 350 (438)
T 3dje_A 340 TANREFLIDRH--------------------------------------------------------------------- 350 (438)
T ss_dssp CTTSCCEEEEC---------------------------------------------------------------------
T ss_pred CCCCCeEEeec---------------------------------------------------------------------
Confidence 999 322110
Q ss_pred EEe-ecCceEEEEeecccCccccccCCCCceeeeeeeeccc
Q psy16975 680 VIP-VRGQTIRIVHNYGHGGYGVTSAPGSARCAVSVFEQSH 719 (728)
Q Consensus 680 ~~~-~~g~~~~v~h~yGhgg~G~t~s~g~A~~~~~l~~~~~ 719 (728)
| .+| +|+++||+|+||+++|++|+.+|++|.+..
T Consensus 351 --p~~~~----l~~a~G~~g~G~~~ap~~g~~la~~i~g~~ 385 (438)
T 3dje_A 351 --PQYHS----LVLGCGASGRGFKYLPSIGNLIVDAMEGKV 385 (438)
T ss_dssp --SSCTT----EEEEECCTTCCGGGTTTHHHHHHHHHHTCC
T ss_pred --CCCCC----EEEEECCCCcchhhhHHHHHHHHHHHhCCC
Confidence 1 123 789999999999999999999999997653
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.92 E-value=9.4e-27 Score=268.85 Aligned_cols=303 Identities=15% Similarity=0.066 Sum_probs=193.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLLS 328 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~~ 328 (728)
..+||+||||||+|+++|++|++ +|++|+|||++.++.++|++++|+++..............+.+...++.+.++..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~--rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~~~ 108 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAA--SGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAP 108 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHhCc
Confidence 56899999999999999999999 8999999999988899999999998863211110001111111222222222221
Q ss_pred ---cccccEE----Ecccc-cccc-----hhhhhhcccccccchhccccCHHHHhhcCCC----CcceeEeEEeeeecCc
Q psy16975 329 ---ENCGVQV----INGYN-LAKS-----EKQCAENHYLKPVLPVYKRMSEEELAEIGPG----DWKYGIYMSTLVIPNR 391 (728)
Q Consensus 329 ---~~~Gv~~----~~G~~-~a~~-----~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~~g~idp~ 391 (728)
...+..+ ..|.. +... ....+........+...++|+++++.+++|. ...+|++++++++||.
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~dg~v~~~ 188 (571)
T 2rgh_A 109 HIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDA 188 (571)
T ss_dssp TSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECCHH
T ss_pred ccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecCCeEchH
Confidence 0111111 01111 1000 0000111112235667899999999998886 2456778888999999
Q ss_pred cceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHH-----Hhhhcc-cccccccccccc
Q psy16975 392 IFLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQ-----RAMQHD-HYAGLLSENCGV 464 (728)
Q Consensus 392 ~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~-----t~~~~g-~ada~~VVnAa~ 464 (728)
.++.+|++.+. ++| ++|+++|+ +++...++.+ ++|. +. .+ ...++.||||+
T Consensus 189 ~l~~~l~~~a~--~~G-------a~i~~~t~V~~l~~~~~~v----------~gV~~~d~~tg--~~~~i~A~~VV~Aa- 246 (571)
T 2rgh_A 189 RLVIDNIKKAA--EDG-------AYLVSKMKAVGFLYEGDQI----------VGVKARDLLTD--EVIEIKAKLVINTS- 246 (571)
T ss_dssp HHHHHHHHHHH--HTT-------CEEESSEEEEEEEEETTEE----------EEEEEEETTTC--CEEEEEBSCEEECC-
T ss_pred HHHHHHHHHHH--HcC-------CeEEeccEEEEEEEeCCEE----------EEEEEEEcCCC--CEEEEEcCEEEECC-
Confidence 99999999998 888 99999988 5555433321 1121 11 11 23444999999
Q ss_pred EEEcccccccchhhhhhcccc---cccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhc
Q psy16975 465 QVINGYNLAKSEKQCAENHYL---KPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAG 541 (728)
Q Consensus 465 ~viaG~~~~~S~~L~~~~gi~---lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~ 541 (728)
|. |+..+....+.. .++.|+||+++..+.... ....+.+... .......
T Consensus 247 ----G~---ws~~l~~~~g~~~~~~~i~p~rG~~l~~~~~~~------------------~~~~~~~~~~---~~~dgr~ 298 (571)
T 2rgh_A 247 ----GP---WVDKVRNLNFTRPVSPKMRPTKGIHLVVDAKKL------------------PVPQPTYFDT---GKQDGRM 298 (571)
T ss_dssp ----GG---GHHHHHTTCCSSCCCCCBCCEEEEEEEEEGGGS------------------CCSSCEEEEC---SSSSSCE
T ss_pred ----Ch---hHHHHHHhhccCccCceeeccceEEEEeccccC------------------CCCcEEEEec---cCCCCcE
Confidence 99 999888765532 468999999642111000 0000100000 0001234
Q ss_pred eeeeecCCceEEecccccc---Ccccccccccchhhhhhcccccccc--cccccceeeeeecccccce
Q psy16975 542 AYIIPSYGGLVTLGGTQDY---GNARLGVDRFDSRAILNRTAAVRPE--ILAAPVEKVWVGLRPYRHH 604 (728)
Q Consensus 542 ~YiiP~~dG~vviGgt~e~---~~~d~~~~~~~~~~ll~~~~~l~P~--L~~~~I~~~waGlRP~tpd 604 (728)
.|++|.. |.+++|+|.+. +.++..+++++.+.|++.+.++||. +...+|+..|+|+||.++|
T Consensus 299 ~~~~P~~-~~~~iG~t~~~~~~~~~~~~~~~~~~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~~~d 365 (571)
T 2rgh_A 299 VFAIPRE-NKTYFGTTDTDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADIEASWAGLRPLLIG 365 (571)
T ss_dssp EEEEEET-TEEEECCCCEECCSCSSSCCCCHHHHHHHHHHHHHHSTTTCCCGGGCCEEEEEEECCBCC
T ss_pred EEEEEcC-CeEEEcCCCcCCCCCcCCCCCCHHHHHHHHHHHHHhcCccCCchhceeEEeEEeeeccCC
Confidence 6899985 67999999764 3456778888999999999999997 4778999999999999987
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.89 E-value=4.8e-25 Score=254.06 Aligned_cols=302 Identities=16% Similarity=0.113 Sum_probs=186.3
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhccc---ccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYD---HYA 324 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~---~~~ 324 (728)
+..+||+|||||++|+++|+.|++ +|++|+|||++..+.++|+++.++++........ ...++..+... .+.
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~--~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~---~~~~l~~e~~~e~~~l~ 90 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQV--RGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQ---FEIKLVAEVGKERAIVY 90 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSSTTCSGGGSSCCEECC------------------CHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh--CCCcEEEEECCCCCCCcccCCcCccccchHHHHh---cCHHHHHHHHHHHHHHH
Confidence 357999999999999999999999 9999999999988889999999888653211110 00011111110 011
Q ss_pred cccc---cccc--cEEE-cccc-cccchhhhhhcccc--cccchhccccCHHHHhhcCCC----CcceeEeEEeeeecCc
Q psy16975 325 GLLS---ENCG--VQVI-NGYN-LAKSEKQCAENHYL--KPVLPVYKRMSEEELAEIGPG----DWKYGIYMSTLVIPNR 391 (728)
Q Consensus 325 ~l~~---~~~G--v~~~-~G~~-~a~~~~~~~~~~~~--~~~g~~~~~L~~~el~~~~P~----~~~~G~~~~~g~idp~ 391 (728)
+... .... +.+. .+.. .+...........+ .......+.++.+++.+++|. ...+|++++++++||.
T Consensus 91 ~~ap~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~ 170 (561)
T 3da1_A 91 ENAPHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDA 170 (561)
T ss_dssp HHCTTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHH
T ss_pred HhCchhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHH
Confidence 1110 0000 1111 1111 01111110001111 112456788999999988885 2456788888999999
Q ss_pred cceecccccCCCCCCCCCCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHHhh----hccccccccccccccEE
Q psy16975 392 IFLPWCMQKDGPSNLGERPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQRAM----QHDHYAGLLSENCGVQV 466 (728)
Q Consensus 392 ~ll~~L~~~a~~~~~G~~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t~~----~~g~ada~~VVnAa~~v 466 (728)
.++.+|++.+. ++| ++|+++++ +++...++.+. +|.... ......++.||||+
T Consensus 171 ~l~~~L~~~a~--~~G-------~~i~~~~~V~~l~~~~g~v~----------gV~~~d~~tg~~~~i~A~~VV~Aa--- 228 (561)
T 3da1_A 171 RLTLEIMKEAV--ARG-------AVALNYMKVESFIYDQGKVV----------GVVAKDRLTDTTHTIYAKKVVNAA--- 228 (561)
T ss_dssp HHHHHHHHHHH--HTT-------CEEEESEEEEEEEEETTEEE----------EEEEEETTTCCEEEEEEEEEEECC---
T ss_pred HHHHHHHHHHH--HcC-------CEEEcCCEEEEEEEcCCeEE----------EEEEEEcCCCceEEEECCEEEECC---
Confidence 99999999998 888 99999998 55654433321 111110 01233444999999
Q ss_pred Ecccccccchhhhhhcccc--cccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceee
Q psy16975 467 INGYNLAKSEKQCAENHYL--KPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYI 544 (728)
Q Consensus 467 iaG~~~~~S~~L~~~~gi~--lpv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~Yi 544 (728)
|. |+..+....+.. .++.|.||+.+ +++.. ..|......++........|+
T Consensus 229 --G~---~s~~l~~~~g~~~~~~v~p~kG~~l---------------------vl~~~-~~~~~~~~~~~~~~dgr~v~~ 281 (561)
T 3da1_A 229 --GP---WVDTLREKDRSKHGKYLKLSKGVHL---------------------VVDQS-RFPLRQAVYFDTESDGRMIFA 281 (561)
T ss_dssp --GG---GHHHHHHTTTCCCSSEEEEEEEEEE---------------------EEEGG-GSCCSSEEEECCSSSCCCEEE
T ss_pred --Cc---chHHHHHhcCCCCCceEEeccEEEE---------------------EECCc-cCCCceEEEeccCCCCcEEEE
Confidence 99 998888776643 57899999853 22100 001000000000001234689
Q ss_pred eecCCceEEecccccc---Ccccccccccchhhhhhcccccccccc--cccceeeeeecccccce
Q psy16975 545 IPSYGGLVTLGGTQDY---GNARLGVDRFDSRAILNRTAAVRPEIL--AAPVEKVWVGLRPYRHH 604 (728)
Q Consensus 545 iP~~dG~vviGgt~e~---~~~d~~~~~~~~~~ll~~~~~l~P~L~--~~~I~~~waGlRP~tpd 604 (728)
+|. +|.+++|+|.+. +..+..+++++++.+++.+.++||.+. ..+|+..|+|+||.++|
T Consensus 282 iP~-~g~~~iGtT~~~~~~~~~~~~~t~~~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~ 345 (561)
T 3da1_A 282 IPR-EGKTYIGTTDTFYDKDIASPRMTVEDRDYILAAANYMFPSLRLTADDVESSWAGLRPLIHE 345 (561)
T ss_dssp EEE-TTEEEECCCCEEECSCTTCCCCCHHHHHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC
T ss_pred Eec-CCCEEEcCCCCccCCCcCCCCCCHHHHHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCC
Confidence 999 778999999864 345778889999999999999999987 78999999999999876
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.86 E-value=6.1e-10 Score=120.68 Aligned_cols=262 Identities=11% Similarity=0.050 Sum_probs=129.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccCCCCCCCCCchhhhhhhhhcccccccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETTKEWIRYSYDHYAGLLS 328 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p~~~l~~~~~~~~~~~~~~s~~~~~~l~~ 328 (728)
+++||+|||||++|+++|++|++ .|++|+|||++.... .+..+++.+.+ ..+.++. .+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~g-~~~~~~~~~~~---------~~~~~lg-----~~~~~-- 63 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIG-SPVRCGEGLSK---------GILNEAD-----IKADR-- 63 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTT-CSCCSCCEEET---------HHHHHTT-----CCCCT--
T ss_pred ccCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCC-CCcccccccCH---------HHHHHcC-----CCCCh--
Confidence 46899999999999999999999 899999999986332 22222322221 0111111 11100
Q ss_pred cccccEEEcccccccchhhhhhcccccccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccceecccccCCCCCCCC
Q psy16975 329 ENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGE 408 (728)
Q Consensus 329 ~~~Gv~~~~G~~~a~~~~~~~~~~~~~~~g~~~~~L~~~el~~~~P~~~~~G~~~~~g~idp~~ll~~L~~~a~~~~~G~ 408 (728)
..-.....++.+.... +.....++..+.. . . ....++...+..+|.+.+. +.|
T Consensus 64 -~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~----~-----~~~~~~~~~l~~~L~~~~~--~~g- 116 (397)
T 3cgv_A 64 -SFIANEVKGARIYGPS------------EKRPIILQSEKAG--N----E-----VGYVLERDKFDKHLAALAA--KAG- 116 (397)
T ss_dssp -TTEEEEESEEEEECTT------------CSSCEEEC-------C----C-----CEEEECHHHHHHHHHHHHH--HHT-
T ss_pred -HHhhhhcceEEEEcCC------------CCEEEEEeccccC--C----c-----eeEEEeHHHHHHHHHHHHH--hCC-
Confidence 0000011111111100 0000001111100 0 0 1246778888899999988 777
Q ss_pred CCceeeEEEEEeeC-ceeEEEeccccccccCCcchhHHHH--hhhccccccccccccccEEEcccccccchhhhhhcccc
Q psy16975 409 RPSTLSVELYHYNR-DSLTVVRGPLHEKVSSGPRTCAMQR--AMQHDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYL 485 (728)
Q Consensus 409 ~~~~l~v~I~e~t~-~~V~~~~g~~v~~l~~~~~v~~v~t--~~~~g~ada~~VVnAa~~viaG~~~~~S~~L~~~~gi~ 485 (728)
++|+.+++ +++...++.+. +|.. ........++.||.|+ |. ++ .+....++.
T Consensus 117 ------v~i~~~~~v~~i~~~~~~v~----------gv~~~~~~~~~~~~a~~vV~A~-----G~---~s-~~~~~~g~~ 171 (397)
T 3cgv_A 117 ------ADVWVKSPALGVIKENGKVA----------GAKIRHNNEIVDVRAKMVIAAD-----GF---ES-EFGRWAGLK 171 (397)
T ss_dssp ------CEEESSCCEEEEEEETTEEE----------EEEEEETTEEEEEEEEEEEECC-----CT---TC-HHHHHHTCC
T ss_pred ------CEEEECCEEEEEEEeCCEEE----------EEEEEECCeEEEEEcCEEEECC-----Cc---ch-HhHHhcCCC
Confidence 89998888 55554433321 1111 0001123344999999 99 77 444444422
Q ss_pred c-ccchhccccCHHHHhhcCCCCcceeEeEEeeeecCccccchhcccchHHHHHhhceeeeecCCceEEeccccccCccc
Q psy16975 486 K-PVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLVTLGGTQDYGNAR 564 (728)
Q Consensus 486 l-pv~PvRGQl~~~el~~~~p~~w~~G~~~~Tlvve~~~~~P~l~~~~~~~~i~~~~~YiiP~~dG~vviGgt~e~~~~d 564 (728)
. +..|..- ..+... .+..... .|......+......+..|++|..++.+.+|-+......
T Consensus 172 ~~~~~~~~~---------------~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~- 232 (397)
T 3cgv_A 172 SVILARNDI---------------ISALQY--RMINVDV-DPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI- 232 (397)
T ss_dssp TTCCCGGGE---------------EEEEEE--EEESCCC-CTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC-
T ss_pred ccCCChhhe---------------eEEEEE--EeccCCC-CCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc-
Confidence 1 1112111 011100 0110000 011000000000113457889999888777766544322
Q ss_pred ccccccchhhhhhcccccccccccccceeeeeeccccc
Q psy16975 565 LGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPYR 602 (728)
Q Consensus 565 ~~~~~~~~~~ll~~~~~l~P~L~~~~I~~~waGlRP~t 602 (728)
......+..+++..+.+|.+...++...|.|..|.+
T Consensus 233 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (397)
T 3cgv_A 233 --HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVS 268 (397)
T ss_dssp --SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECC
T ss_pred --cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecC
Confidence 112334455555556667788888889999988874
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.80 E-value=5.9e-10 Score=122.19 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=33.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
+++||+|||||++|+++|++|++ .|++|+|||+...+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQKFP 40 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSS
T ss_pred ccCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCC
Confidence 45899999999999999999999 89999999998643
No 22
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.57 E-value=6.9e-09 Score=111.52 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=33.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|.+|||+|||||++||++|+.|++ .|++|+||||..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~ 37 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCC
Confidence 356999999999999999999999 999999999964
No 23
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.51 E-value=6.2e-10 Score=128.06 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=52.3
Q ss_pred CCceeeEEeecCCCCCCCccccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccC
Q psy16975 227 GDKKGLFFIPTQSCPANPKVMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 300 (728)
Q Consensus 227 ~~~w~~~~~~~~~~~~~~~~~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p 300 (728)
...|...|.+........+....++||+|||||++||++|++|++ .|.+|+||||.....++|..++|.+..
T Consensus 98 ~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~s~gg~~~ 169 (566)
T 1qo8_A 98 KKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKK--AGANVILVDKAPFSGGNSMISAGGMNA 169 (566)
T ss_dssp CCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSSCTTGGGCCSCEEC
T ss_pred CcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcccccCceeEc
Confidence 446766665542110000012357899999999999999999999 899999999988777788877776654
No 24
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.44 E-value=5.7e-09 Score=115.77 Aligned_cols=40 Identities=28% Similarity=0.400 Sum_probs=32.9
Q ss_pred cccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 246 VMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 246 ~~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
||+.++||+|||||++|+++|++|++ .|.+|+|||+....
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~--~G~~V~llEk~~~~ 62 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGK--RGRRVLVIDHARAP 62 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCC
Confidence 55678999999999999999999999 89999999998643
No 25
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.28 E-value=2.2e-08 Score=115.27 Aligned_cols=50 Identities=22% Similarity=0.317 Sum_probs=43.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccC
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 300 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p 300 (728)
.++||+|||||++||++|+.|++ .|.+|+||||.....++|..++|.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~a~gg~~~ 174 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATD--SGAKVILIEKEPVIGGNAKLAAGGMNA 174 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGCCSCEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCchhhcCceEEe
Confidence 36899999999999999999999 899999999988767777777665544
No 26
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.23 E-value=4.2e-07 Score=89.55 Aligned_cols=35 Identities=31% Similarity=0.446 Sum_probs=32.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|++||+|||||++||++|+.|++ .|++|+||||..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~--~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSR 35 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCC
Confidence 35799999999999999999999 999999999964
No 27
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.23 E-value=4.2e-08 Score=108.15 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=33.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+.++||+|||||++|+++|++|++ .|.+|+|||+..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~--~G~~V~vlEk~~ 37 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAK--LGKSVTVFDNGK 37 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 356899999999999999999999 899999999976
No 28
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.22 E-value=9.8e-08 Score=106.41 Aligned_cols=38 Identities=18% Similarity=0.339 Sum_probs=33.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
.+++||+|||||++|+++|++|++ .|.+|+|||+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~--~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAE--EGANVLLLDKGNKL 61 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHH--CCCCEEEEECCCCC
Confidence 346899999999999999999999 89999999997643
No 29
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.16 E-value=7.1e-07 Score=102.84 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+++||+|||||++||++|++|++ .|++|+|||+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCC
Confidence 46899999999999999999999 8999999999754
No 30
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.13 E-value=3.5e-07 Score=104.69 Aligned_cols=49 Identities=29% Similarity=0.331 Sum_probs=34.1
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccC
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 300 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p 300 (728)
.++||+|||||++||++|++|++ |.+|+||||.....++|..++|.+..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~~~g~s~~a~Ggi~~ 55 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPVTEGSTFYAQGGIAA 55 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCTTC------------
T ss_pred CCCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCCCCCChhhcCCCEEE
Confidence 46899999999999999999998 78999999998777777777665544
No 31
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.90 E-value=4e-06 Score=94.99 Aligned_cols=50 Identities=24% Similarity=0.375 Sum_probs=44.3
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCcccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFE 299 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~ 299 (728)
..++||+|||||++||++|++|++ .|.+|+||||.....++|..++|.+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~--~G~~V~vlEk~~~~GG~s~~s~G~~~ 88 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAAR--AGADVLVLERTSGWGGATALAGGFIY 88 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGSCCCEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcchhcCccee
Confidence 356899999999999999999999 89999999999877788888877654
No 32
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.81 E-value=5.8e-06 Score=92.63 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=34.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc-ccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF-NMD 288 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~-~g~ 288 (728)
.+++||+|||||++||++|++|++. .|++|+|+|+.. +|+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCCcC
Confidence 3468999999999999999999973 499999999975 443
No 33
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.81 E-value=1.1e-05 Score=84.59 Aligned_cols=38 Identities=26% Similarity=0.394 Sum_probs=33.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
|..|||+|||||.+|+++|++|++ .|++|+|||++.++
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~g 41 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNR 41 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 567999999999999999999999 89999999997654
No 34
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.80 E-value=7.8e-06 Score=89.65 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=33.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc-cccccCC
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK-FNMDTTS 291 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~-~~g~gAS 291 (728)
+||+|||||++|+++|++|++ .|++|+|||+. .++..++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~--~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN--AGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHH--cCCeEEEEecCCCccCeec
Confidence 699999999999999999999 89999999985 4554443
No 35
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.77 E-value=1.1e-05 Score=84.58 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=34.7
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
...+|||+|||||.+|+++|++|++ .|++|+|||++.++
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~g 41 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPG 41 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC
Confidence 3457999999999999999999999 89999999997654
No 36
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.76 E-value=1.1e-05 Score=88.19 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=31.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+||+|||||++||++|++|++ .|++|+|||++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK--AGHEVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCceEEEeCCCC
Confidence 489999999999999999999 8999999999754
No 37
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.76 E-value=8.4e-06 Score=95.44 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=41.1
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCc-cccccC
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGA-AGLFEP 300 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~a-gGii~p 300 (728)
.++||+|||||++||++|++|++ .|.+|+||||..+..+.|..+ ||+...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae--~G~~V~vlEK~~~~~g~s~~a~GGi~a~ 54 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQ--KGLSTIVLSLIPVKRSHSAAAQGGMQAS 54 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCGGGSGGGGCCSCEECC
T ss_pred ccccEEEECchHHHHHHHHHHHH--CCCcEEEEeccCCCCCcccccCCCeEec
Confidence 46899999999999999999999 899999999988765555544 454443
No 38
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.74 E-value=1.2e-05 Score=84.84 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=32.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCC
Confidence 4699999999999999999999 899999999975
No 39
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.72 E-value=8.2e-06 Score=90.09 Aligned_cols=38 Identities=24% Similarity=0.432 Sum_probs=33.0
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC------CcEEEeecc-cccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN------CDVTVIADK-FNMD 288 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G------~~VtVIEk~-~~g~ 288 (728)
+++||+|||||++||++|++|++ .| ++|+|+|+. .+|.
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~--~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEK--EIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH--HHTTTTCSEEEEEECSSSSSCT
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--hccccCCCCCEEEEECCCCCCc
Confidence 35799999999999999999999 77 999999996 4443
No 40
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.71 E-value=1.5e-05 Score=83.28 Aligned_cols=39 Identities=23% Similarity=0.304 Sum_probs=34.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
|...|||+|||||.+|+++|++|++ .|++|+|+|+...+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~g 39 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAG 39 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC
Confidence 4456999999999999999999999 89999999997654
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.70 E-value=1.8e-05 Score=82.60 Aligned_cols=38 Identities=32% Similarity=0.556 Sum_probs=33.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCC-CCcEEEeecccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFP-NCDVTVIADKFNMD 288 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIEk~~~g~ 288 (728)
.++||+|||||++|+++|++|++ . |.+|+|||+.....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~--~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK--NPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT--STTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHH--cCCCeEEEEECCCCCC
Confidence 45799999999999999999999 6 99999999976433
No 42
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.69 E-value=1.5e-05 Score=88.49 Aligned_cols=39 Identities=28% Similarity=0.481 Sum_probs=33.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc-ccccC
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF-NMDTT 290 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~-~g~gA 290 (728)
++||+|||||++||++||+|++ .|. +|+|+|+.. +|..+
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~--~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSR--APCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHT--SSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHh--CCCCCcEEEEeCCCCCCCce
Confidence 3699999999999999999999 899 999999964 44433
No 43
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.69 E-value=1.4e-05 Score=92.45 Aligned_cols=49 Identities=18% Similarity=0.389 Sum_probs=40.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCc-ccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGA-AGLFE 299 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~a-gGii~ 299 (728)
.++||+|||||++||++|++|++ .|.+|+||||.....+.|..+ ||+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~--~G~~V~vlEK~~~~~g~s~~a~GGi~~ 55 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQ--SGQTCALLSKVFPTRSHTVSAQGGITV 55 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCCCCCCcchhhCCccEE
Confidence 46899999999999999999999 899999999987665555544 45443
No 44
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.68 E-value=1.3e-05 Score=89.15 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=34.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
|.+++||+|||||++|+++|+.|++ .|++|+|||+...
T Consensus 3 m~~~~dVvIVGaG~aGl~aA~~La~--~G~~V~vlE~~~~ 40 (453)
T 3atr_A 3 KELKYDVLIIGGGFAGSSAAYQLSR--RGLKILLVDSKPW 40 (453)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHSS--SSCCEEEECSSCG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCC
Confidence 4457899999999999999999999 8999999999754
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.68 E-value=1.3e-05 Score=89.71 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.+|||||||+.||++|++|++ .|++|+|+|++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDK 35 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC--
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCC
Confidence 379999999999999999999 9999999999753
No 46
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.67 E-value=1.5e-05 Score=88.64 Aligned_cols=46 Identities=22% Similarity=0.358 Sum_probs=36.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCC--CcEEEeeccc-ccc-cCCCCcccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPN--CDVTVIADKF-NMD-TTSDGAAGL 297 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G--~~VtVIEk~~-~g~-gAS~~agGi 297 (728)
++||+|||||++||++|++|++ .| ++|+|+|+.. ++. ..|...+|+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~--~g~~~~v~v~E~~~~~GG~~~~~~~~g~ 53 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER--AFPDLNITLLEAGERLGGKVATYREDGF 53 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH--HCTTSEEEEECSSSSSBTTCCEECSTTC
T ss_pred cccEEEECCCHHHHHHHHHHHH--hCCCCCEEEEECCCCCCceeEEEeeCCE
Confidence 5799999999999999999999 67 9999999964 332 244444553
No 47
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.66 E-value=1.9e-05 Score=86.65 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=31.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||++||++|++|++ .|++|+|+|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR--NGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 389999999999999999999 899999999975
No 48
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.66 E-value=1.5e-05 Score=92.66 Aligned_cols=51 Identities=20% Similarity=0.365 Sum_probs=42.1
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCc-cccccC
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGA-AGLFEP 300 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~a-gGii~p 300 (728)
..++||+|||||++||++|++|++ .|.+|+||||..+..+.|..+ ||+...
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~--~G~~V~vlEK~~~~~g~s~~a~GGi~a~ 67 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSE--AGFNTACVTKLFPTRSHTVAAQGGINAA 67 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEECC
T ss_pred cccCCEEEECccHHHHHHHHHHHH--CCCcEEEEeccCCCCCCchhhCCCcEec
Confidence 456899999999999999999999 899999999987766666555 444443
No 49
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.61 E-value=1.2e-05 Score=87.07 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=32.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||++|+++|+.|++ .|++|+|||+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~--~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK--AGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH--HTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCC
Confidence 4799999999999999999999 8999999999764
No 50
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.61 E-value=2.4e-05 Score=82.14 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=39.2
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccC
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 300 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p 300 (728)
+.+.+||+|||||++|+++|++|++ .|++|+|||+.. ..+...+|.|..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~vie~~~---~~~~~~gg~~~~ 67 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLAR--AEIKPILYEGMM---ANGIAAGGQLTT 67 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSS---BTTBCTTCGGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCC---CCCCCcCccccc
Confidence 4557899999999999999999999 899999999975 334455666554
No 51
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.58 E-value=2.8e-05 Score=86.68 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=34.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+..+||+|||||+.||++|+.|++ .|++|+|+|++.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~--~G~~V~vlE~~~ 44 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSV--DGKKVLHIDKQD 44 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 4457899999999999999999999 999999999975
No 52
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.57 E-value=2.6e-05 Score=85.04 Aligned_cols=37 Identities=32% Similarity=0.459 Sum_probs=32.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+..+||+|||||++||++|+.|++ .|++|+|||+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~E~~~ 56 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQ--SGIDCDVYEAVK 56 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 3457899999999999999999999 899999999975
No 53
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.56 E-value=3.3e-05 Score=87.94 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=34.8
Q ss_pred CcceEEEeecceechhhHHHhhhhC-CCCcEEEeecccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRF-PNCDVTVIADKFNMD 288 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~-~G~~VtVIEk~~~g~ 288 (728)
..+||+|||||++|+++|++|++.. +|++|+|||+...+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~ 44 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR 44 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC
Confidence 4679999999999999999999954 689999999976543
No 54
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.55 E-value=3.8e-05 Score=88.83 Aligned_cols=39 Identities=31% Similarity=0.353 Sum_probs=35.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
+|+.+||+|||||++|+++|++|++ .|++|+|||+...+
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAFP 58 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCCC
Confidence 4457999999999999999999999 89999999998644
No 55
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.53 E-value=3.4e-05 Score=86.69 Aligned_cols=45 Identities=31% Similarity=0.441 Sum_probs=38.2
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCcccccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFE 299 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~ 299 (728)
||+|||||++|+++|++|++ .|.+|+||||. ...++|.++.|.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~--~G~~V~viek~-~~~g~s~~a~Ggi~ 45 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR--AGKKVTLISKR-IDGGSTPIAKGGVA 45 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH--TTCCEEEECSS-TTCSSGGGCCSCEE
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEeCC-CCCchHHHHhCCeE
Confidence 79999999999999999999 89999999999 55566666555443
No 56
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.52 E-value=3.4e-05 Score=84.42 Aligned_cols=36 Identities=36% Similarity=0.475 Sum_probs=32.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCc-EEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCD-VTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~-VtVIEk~~ 285 (728)
+..+||+|||||++||++|+.|++ .|++ |+|||+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~--~G~~~v~v~E~~~ 38 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQ--AGIGKVTLLESSS 38 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCC
Confidence 456899999999999999999999 8999 99999975
No 57
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.51 E-value=4.3e-05 Score=85.39 Aligned_cols=39 Identities=36% Similarity=0.593 Sum_probs=34.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
++..+||+|||||++||++|++|++ .|++|+|+|+....
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~--~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQK--AGYKVTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeccCCC
Confidence 3457799999999999999999999 89999999997543
No 58
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.51 E-value=3.7e-05 Score=83.69 Aligned_cols=36 Identities=31% Similarity=0.495 Sum_probs=33.3
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||++||++|+.|++ .|++|+|+|+..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~ 38 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSP 38 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCC
Confidence 346899999999999999999999 899999999975
No 59
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.50 E-value=3.4e-05 Score=83.84 Aligned_cols=35 Identities=31% Similarity=0.312 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~--~G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGR--QGHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCC
Confidence 45899999999999999999999 899999999974
No 60
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.48 E-value=4.5e-05 Score=86.17 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=32.6
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++.+||+|||||++||++|++|++ .|++|+|+|++.
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~--~G~~V~vlE~~~ 37 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHD--SGLNVVVLEARD 37 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 346799999999999999999999 899999999965
No 61
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.48 E-value=5.5e-05 Score=85.94 Aligned_cols=37 Identities=35% Similarity=0.478 Sum_probs=33.8
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
..++||+|||||++||++|+.|++ .|++|+||||...
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~--~G~~v~viEr~~~ 39 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLAR--QGVRVLVVERRPG 39 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSSS
T ss_pred CccCcEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCC
Confidence 356899999999999999999999 8999999999753
No 62
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.48 E-value=5.2e-05 Score=83.88 Aligned_cols=37 Identities=35% Similarity=0.525 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
+++||+|||||++|+++|+.|++ .|++|+|||+....
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~~~ 57 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRKPD 57 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCChH
Confidence 45799999999999999999999 99999999998643
No 63
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.47 E-value=4.7e-05 Score=86.18 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=33.8
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+.++||+|||||++|+++|+.|++ .|++|+|||+...
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liE~~~~ 41 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAM--RGHRVLLLEREAF 41 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHh--CCCCEEEEccCCC
Confidence 346899999999999999999999 8999999999864
No 64
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.47 E-value=4.2e-05 Score=86.51 Aligned_cols=36 Identities=36% Similarity=0.511 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCC-CcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~ 285 (728)
+..+||+|||||++||++|+.|++ .| ++|+|+|+..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~--~G~~~V~VlEa~~ 42 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQ--NGIQDCLVLEARD 42 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHH--TTCCSEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHh--cCCCCEEEEeCCC
Confidence 346799999999999999999999 89 9999999975
No 65
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.47 E-value=4.4e-05 Score=80.98 Aligned_cols=37 Identities=32% Similarity=0.500 Sum_probs=32.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||.+||++|++|++...|++|+|||++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3579999999999999999998633699999999975
No 66
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.46 E-value=5.5e-05 Score=81.54 Aligned_cols=33 Identities=33% Similarity=0.423 Sum_probs=31.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||++||++|+.|++ .|++|+|+||..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~--~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK--HGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCCEEEEecCC
Confidence 479999999999999999999 999999999975
No 67
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.45 E-value=4.1e-05 Score=89.67 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=37.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCC------CCcEEEeecccccccCCCCcc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFP------NCDVTVIADKFNMDTTSDGAA 295 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~------G~~VtVIEk~~~g~gAS~~ag 295 (728)
.++||+|||||++||++|++|++ . |.+|+||||..+..++|...|
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~--~~~~~~pG~~V~vleK~~~~~s~s~AqG 71 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVR--WADKYAPEAKILLVDKASLERSGAVAQG 71 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HHHHHCTTCCEEEECSSCTTTCSTTTTC
T ss_pred EEcCEEEECCCHHHHHHHHHHHh--hccccCCCCcEEEEEecCCCCCcccccC
Confidence 46899999999999999999999 5 999999999877655554333
No 68
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.45 E-value=5.1e-05 Score=79.58 Aligned_cols=38 Identities=26% Similarity=0.437 Sum_probs=33.7
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
|...+||+|||||++|+++|++|++ .|++|+|||+..+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~ 50 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKAVA 50 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSST
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCC
Confidence 4557899999999999999999999 8999999999643
No 69
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.45 E-value=4.6e-05 Score=84.14 Aligned_cols=36 Identities=36% Similarity=0.482 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+.++||+|||||++||++|++|++ .|++|+|+|+..
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~ 38 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRK--AGLSVAVIEARD 38 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCC
Confidence 346899999999999999999999 899999999964
No 70
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.45 E-value=3.6e-05 Score=89.15 Aligned_cols=50 Identities=24% Similarity=0.389 Sum_probs=39.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC--CcEEEeecccccccCCC-CccccccC
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN--CDVTVIADKFNMDTTSD-GAAGLFEP 300 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G--~~VtVIEk~~~g~gAS~-~agGii~p 300 (728)
.++||+|||||++||++|++|++ .| .+|+||||.....+.|. ..+|+...
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~--~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~ 56 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQ--ANPNAKIALISKVYPMRSHTVAAEGGSAAV 56 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HCTTCCEEEEESSCGGGSGGGGCCSCEECC
T ss_pred ccCCEEEECCCHHHHHHHHHHHh--cCCCCcEEEEeCCCCCCChHHHhcCccEEe
Confidence 35799999999999999999999 78 99999999865544443 44555433
No 71
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.45 E-value=5.2e-05 Score=82.61 Aligned_cols=36 Identities=39% Similarity=0.494 Sum_probs=33.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++.+||+|||||++||++|+.|++ .|++|+|||+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 456899999999999999999999 899999999975
No 72
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.44 E-value=5.3e-05 Score=78.80 Aligned_cols=34 Identities=26% Similarity=0.287 Sum_probs=32.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+.+||+|||||++|+++|++|++ .|++|+|||+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSAR--YMLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHH--CCCcEEEEecc
Confidence 46899999999999999999999 89999999997
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.44 E-value=5e-05 Score=80.08 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=33.3
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+..+||+|||||.+|+++|++|++ .|++|+|||+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~ 38 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLP 38 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSS
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 4456899999999999999999999 899999999964
No 74
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.44 E-value=4.4e-05 Score=83.70 Aligned_cols=40 Identities=20% Similarity=0.320 Sum_probs=34.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCC-CCcEEEeeccc-ccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFP-NCDVTVIADKF-NMD 288 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIEk~~-~g~ 288 (728)
|+.++||+|||||++||++|++|++ . |++|+|+|+.. +|.
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~--~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVAT--QLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH--HSCCCEEEECSSSSSSG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH--hCCCCEEEEeCCCCCCC
Confidence 3447899999999999999999999 6 99999999974 443
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.43 E-value=5.3e-05 Score=85.04 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=34.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD 288 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~ 288 (728)
.++||+|||||++|+++|++|++ .|++|+|||++.++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~GG 62 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGA--LGKRVAIAEEYRIGG 62 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTH
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CcCEEEEEeCCCCCC
Confidence 46899999999999999999999 899999999966543
No 76
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.43 E-value=7.7e-05 Score=76.70 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=32.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||++|+++|++|++ .|++|+|||++.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR--ARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCc
Confidence 4799999999999999999999 8999999999753
No 77
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.40 E-value=6.5e-05 Score=82.16 Aligned_cols=37 Identities=27% Similarity=0.455 Sum_probs=33.3
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC-CcEEEeeccc-cc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKF-NM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~-~g 287 (728)
+.+||+|||||++||++|++|++ .| ++|+|+|+.. +|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~--~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ--AGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEECCCCCC
Confidence 46799999999999999999999 89 8999999964 44
No 78
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.40 E-value=6.4e-05 Score=75.94 Aligned_cols=35 Identities=29% Similarity=0.443 Sum_probs=32.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+++||+|||||.+|+++|++|++ .|.+|+|||+..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCC
Confidence 46899999999999999999999 899999999973
No 79
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.37 E-value=5.9e-05 Score=84.78 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=31.4
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+++++||+|||||.+|+++|+.|++ .|++|+|||+..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~ 58 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQ--LGMKVAVVEKRS 58 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCC
Confidence 4457999999999999999999999 899999999853
No 80
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.36 E-value=7.6e-05 Score=83.23 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=33.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
.++||+|||||.+|+++|++|++ .|++|+|||++.+|
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~--~G~~V~liEk~~~G 40 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAA--LGKKVAIAEEFRYG 40 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSCTT
T ss_pred CCCcEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCCCC
Confidence 46899999999999999999999 89999999996544
No 81
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.36 E-value=5e-05 Score=85.59 Aligned_cols=38 Identities=32% Similarity=0.368 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhC-CCCcEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRF-PNCDVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~-~G~~VtVIEk~~~g 287 (728)
.+||+|||||++|+++|++|++.. +|++|+|||+...+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~ 40 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR 40 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC----
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC
Confidence 469999999999999999999944 58999999997643
No 82
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.35 E-value=5.2e-05 Score=85.26 Aligned_cols=48 Identities=19% Similarity=0.108 Sum_probs=40.4
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc-ccccCCCCccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF-NMDTTSDGAAG 296 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~-~g~gAS~~agG 296 (728)
|+..+||+|||+|+.|+++|+.|++ .|++|+|+|++. .|..++..+.+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~--~g~~v~~~e~~~~~Gg~~~s~~~~ 65 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSH--YGKKILVLDRNPYYGGETASLNLT 65 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGGCEECHH
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeccCCCCCCccccchh
Confidence 5678999999999999999999999 999999999975 55555555543
No 83
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.35 E-value=6.2e-05 Score=78.68 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=33.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++.+||+|||||++|+++|++|++ .|++|+|||+..+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~ 39 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEK 39 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCC
Confidence 456899999999999999999999 8999999997643
No 84
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.34 E-value=9.6e-05 Score=80.73 Aligned_cols=35 Identities=37% Similarity=0.619 Sum_probs=32.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+..+||+|||||++||++|++|++ .|++|+|+|+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~--~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR--AGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH--TSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHH--CCCcEEEEecc
Confidence 456799999999999999999999 89999999997
No 85
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.33 E-value=8.3e-05 Score=83.35 Aligned_cols=38 Identities=34% Similarity=0.516 Sum_probs=32.7
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
|...+||+|||||++||++|++|++ .|++|+|+|+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~ 47 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKI--HGLNVTVFEAEGK 47 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHT--TSCEEEEECSSSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEeCCC
Confidence 3456899999999999999999999 8999999999753
No 86
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.33 E-value=7.6e-05 Score=79.37 Aligned_cols=35 Identities=29% Similarity=0.251 Sum_probs=30.9
Q ss_pred ceEEEeecceechhhHHHhhh-hCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQR-RFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~-~~~G~~VtVIEk~~ 285 (728)
+||+|||||++|+++|++|++ ..+|++|+||||..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 589999999999999999998 23589999999975
No 87
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.32 E-value=7.8e-05 Score=80.52 Aligned_cols=36 Identities=22% Similarity=0.458 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
..+||+|||||++|+++|+.|++ .|++|+|||+...
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~ 45 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSE 45 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCC
Confidence 46899999999999999999999 8999999999753
No 88
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.32 E-value=8.1e-05 Score=78.47 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=32.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||++|+++|++|++ .|++|+|||+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~--~g~~v~vie~~~ 36 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR--SGLSYVILDAEA 36 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--SSCCEEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCC
Confidence 35799999999999999999999 899999999975
No 89
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.32 E-value=0.0001 Score=79.50 Aligned_cols=39 Identities=28% Similarity=0.447 Sum_probs=33.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
..+||+|||||++|+++|++|++..+|++|+|||+....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 468999999999999999999993239999999998643
No 90
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.32 E-value=9.5e-05 Score=77.73 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=33.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||.+|+++|++|++ .|++|+|||+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~ 41 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGM 41 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC
T ss_pred cccCCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCC
Confidence 456899999999999999999999 899999999984
No 91
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.31 E-value=9e-05 Score=82.38 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=31.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||++||++|+.|++ .|++|+|+|+..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~--~g~~v~v~E~~~ 49 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRS--RGTDAVLLESSA 49 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHT--TTCCEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCC
Confidence 456799999999999999999999 899999999975
No 92
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.27 E-value=0.0001 Score=83.34 Aligned_cols=37 Identities=30% Similarity=0.388 Sum_probs=34.2
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+++++||+|||||++||++|+.|++ .|++|+||||..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 4567899999999999999999999 999999999975
No 93
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.27 E-value=0.00014 Score=83.16 Aligned_cols=39 Identities=26% Similarity=0.371 Sum_probs=34.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhC-CCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRF-PNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~-~G~~VtVIEk~~~ 286 (728)
+..+||+|||||++|+++|+.|++.. +|.+|+|||+...
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 45789999999999999999999965 6899999999754
No 94
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.24 E-value=0.00013 Score=80.23 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=33.7
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+...+||+|||||++||++|++|++ .|.+|+|+|+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~--~g~~v~v~E~~~ 62 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLAS--SGQRVLIVDRRP 62 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHH--CCCceEEEeccC
Confidence 3457899999999999999999999 899999999964
No 95
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.24 E-value=0.00012 Score=78.33 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=32.8
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+..+||+|||||.+|+++|++|++ .|++|+|||+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~ 47 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMP 47 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCC
Confidence 4457899999999999999999999 899999999964
No 96
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.21 E-value=0.00016 Score=81.80 Aligned_cols=36 Identities=36% Similarity=0.397 Sum_probs=33.1
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++.+||+|||||++||++|+.|++ .|++|+||||..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~ 45 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLP 45 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCC
Confidence 457899999999999999999999 899999999975
No 97
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.21 E-value=9.7e-05 Score=77.74 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=31.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeec
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk 283 (728)
+..+||+|||||++|+++|++|++ .|++|+|||+
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~ 39 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAAR--AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCeEEEEec
Confidence 456899999999999999999999 8999999998
No 98
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.20 E-value=0.00015 Score=79.10 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++||+|||||++|+++|+.|++ .|++|+|+|++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE--KGHQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEEecC
Confidence 4799999999999999999999 899999999965
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.19 E-value=0.00014 Score=77.53 Aligned_cols=35 Identities=37% Similarity=0.599 Sum_probs=32.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
.++||+|||||.+|+++|++|++ .|+ +|+|||++.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~--~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD--FGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH--cCCCcEEEEecCC
Confidence 35799999999999999999999 899 999999975
No 100
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.19 E-value=0.00014 Score=76.94 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=33.5
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++..+||+|||||.+|+++|++|++ .|++|+|||+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~ 47 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTS 47 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCC
Confidence 4557899999999999999999999 899999999763
No 101
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.19 E-value=0.00013 Score=83.83 Aligned_cols=50 Identities=22% Similarity=0.306 Sum_probs=42.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccccCCCCccccccC
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 300 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~gAS~~agGii~p 300 (728)
..+||+|||+|++|+++|+.|++ .|++|+|||+.....+.|..++|.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~--~g~~v~~~e~~~~~~~~~~~a~gg~~~ 174 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD--AGAKVILLEKEPIPGGNTKLAAGGMNA 174 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS--SSCCEEEECSSSSSCTTGGGCCSCEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCCCCcchhhhCCeeEc
Confidence 46799999999999999999999 899999999987666777777665543
No 102
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.19 E-value=0.00016 Score=77.51 Aligned_cols=39 Identities=31% Similarity=0.451 Sum_probs=33.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
..+||+|||||++|+++|++|++..+|++|+|+|+....
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 356999999999999999999993239999999997644
No 103
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.18 E-value=0.00015 Score=84.50 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=38.2
Q ss_pred CcceEEEeecceechhhHHHhh---hhCCCCcEEEeecccccccCCCCcccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQ---RRFPNCDVTVIADKFNMDTTSDGAAGLFE 299 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La---~~~~G~~VtVIEk~~~g~gAS~~agGii~ 299 (728)
.++||+|||||++||++|++|+ ++ .|.+|+||||...+. ++..++|.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~-~G~~V~vlEK~~~~~-s~~~a~G~~~ 72 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKL-GGLKVTLVEKAAVER-SGAVAQGLSA 72 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTT-TTCCEEEECSSCTTT-CSTTTTCEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhh-CCCeEEEEeCcCCCC-Ccceeccccc
Confidence 4689999999999999999999 31 689999999987643 3334555543
No 104
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.18 E-value=0.00014 Score=78.76 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=31.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||++|+++|++|++ .|++|+|+|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK--LNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG--GTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCcEEEEecCC
Confidence 699999999999999999999 899999999964
No 105
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.17 E-value=0.00017 Score=80.44 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=34.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
+.++||+|||||.+|+++|++|++ .|++|+|||++.+|
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~G 39 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIG 39 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCC
Confidence 456899999999999999999999 89999999998544
No 106
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.15 E-value=0.0002 Score=79.38 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=34.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+..+||+|||||+.|+++|+.|++ .|++|+|+|+..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~--~g~~v~~~e~~~ 39 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSV--NGKKVLHMDRNP 39 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCC
Confidence 4567899999999999999999999 899999999975
No 107
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.15 E-value=0.00014 Score=75.39 Aligned_cols=36 Identities=31% Similarity=0.364 Sum_probs=32.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEE-eecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTV-IADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtV-IEk~~~ 286 (728)
..+||+|||||.+|+++|++|++ .|++|+| +|+..+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~li~e~~~~ 39 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR--GGLKNVVMFEKGMP 39 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--HTCSCEEEECSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCCCC
Confidence 35799999999999999999999 8999999 999543
No 108
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.13 E-value=0.0002 Score=80.13 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=31.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||++||++|++|++ .|++|+|+|+..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~--~g~~v~v~E~~~ 72 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV--AGFKTLLLEARD 72 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 799999999999999999999 899999999975
No 109
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.13 E-value=0.0002 Score=68.84 Aligned_cols=33 Identities=36% Similarity=0.450 Sum_probs=31.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||.+|+.+|+.|++ .|.+|+|+|+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCC
Confidence 699999999999999999999 899999999974
No 110
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.13 E-value=0.00014 Score=83.75 Aligned_cols=35 Identities=31% Similarity=0.457 Sum_probs=32.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCC------CCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFP------NCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~------G~~VtVIEk~~ 285 (728)
+++||+|||||++||++|+.|++ . |++|+||||..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~--~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQ--LAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HHHHTTCCCCEEEECSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHh--cccccCCCCcEEEEeCCC
Confidence 45899999999999999999999 6 99999999975
No 111
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.13 E-value=0.0002 Score=80.55 Aligned_cols=39 Identities=23% Similarity=0.204 Sum_probs=33.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCC-CcEEEeeccc-ccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKF-NMD 288 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~-~g~ 288 (728)
++.+||+|||||++||++|++|++ .| .+|+|+|+.. +|.
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~--~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTE--LGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHH--cCCCCEEEEeCCCCCCC
Confidence 346899999999999999999999 77 7999999974 443
No 112
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.12 E-value=0.00016 Score=75.68 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=32.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+||+|||||++|+++|++|++ .|++|+|||+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM--RQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCC
Confidence 5799999999999999999999 899999999975
No 113
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.12 E-value=0.0002 Score=74.61 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=31.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
+||+|||||.+|+++|++|++ .|+ +|+|||++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~~v~lie~~~ 35 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR--GGVKNAVLFEKGM 35 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCSSEEEECSSS
T ss_pred ceEEEECccHHHHHHHHHHHH--CCCCcEEEEcCCC
Confidence 699999999999999999999 899 999999964
No 114
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.09 E-value=0.00022 Score=81.47 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||++||++|+.|++ .|.+|+||||..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~--~G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH--RQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 35799999999999999999999 899999999975
No 115
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.08 E-value=0.00021 Score=80.05 Aligned_cols=35 Identities=37% Similarity=0.504 Sum_probs=32.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||++||++|+.|++ .|++|+|+|+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~--~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG--AGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCC
Confidence 46799999999999999999999 899999999964
No 116
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.08 E-value=0.00023 Score=81.43 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=33.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
...+||+|||||++|+++|++|++ .|++|+|||++..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~--~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQ--MGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHH--TTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCeEEEEEccCc
Confidence 346899999999999999999999 9999999999753
No 117
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.08 E-value=0.00025 Score=78.65 Aligned_cols=36 Identities=36% Similarity=0.429 Sum_probs=32.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
++.+||+|||||++|+++|++|++ .|. +|+|||+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRG 41 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCC
Confidence 456899999999999999999999 888 999999974
No 118
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.08 E-value=0.00023 Score=79.46 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=33.8
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+.++||+|||||.+|+++|++|++ .|++|+|||++..
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~ 38 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAA--FGKRVALIESKAL 38 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCT
T ss_pred CccCcEEEECCCHHHHHHHHHHHh--CCCcEEEEcCCCC
Confidence 346899999999999999999999 8999999999854
No 119
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.07 E-value=0.00021 Score=79.37 Aligned_cols=37 Identities=14% Similarity=0.086 Sum_probs=33.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+.++||+|||||.+|+++|++|++ .|++|+|||++..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~ 38 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAM--YGQKCALIEAKEL 38 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSCT
T ss_pred CccCCEEEECCCHHHHHHHHHHHh--CCCeEEEEcCCCC
Confidence 346899999999999999999999 8999999999854
No 120
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.07 E-value=0.00027 Score=80.15 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=34.2
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++.++||+|||||.+|+++|++|++ .|++|+|||++.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRA--MGGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCC
Confidence 4557899999999999999999999 899999999986
No 121
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.06 E-value=0.00023 Score=80.79 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=33.3
Q ss_pred CcceEEEeecceechhhHHHhhhhC----------CCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRF----------PNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~----------~G~~VtVIEk~~~ 286 (728)
..+||+|||||++|+++|+.|++.. +|++|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 4689999999999999999999932 6899999999653
No 122
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.05 E-value=0.0002 Score=80.07 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=34.9
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
++..+||+|||||.+|+++|++|++ .|++|+|||++..+
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~~~G 55 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAE--LGARAAVVESHKLG 55 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCC
Confidence 3457899999999999999999999 89999999987654
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.04 E-value=0.00024 Score=79.31 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=32.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||.+|+++|++|++ .|++|+|||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ--LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 46899999999999999999999 899999999985
No 124
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.04 E-value=0.00018 Score=77.84 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=31.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.||+|||||++||++|+.|++..+|++|+|||+...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 389999999999999999999323999999999753
No 125
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.02 E-value=0.0002 Score=79.95 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=32.6
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++++||+|||||.+|+++|+.|++ .|++|+|||+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~ 37 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKG 37 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTS
T ss_pred CccceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCC
Confidence 346899999999999999999999 899999999643
No 126
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=97.00 E-value=0.00095 Score=71.51 Aligned_cols=68 Identities=18% Similarity=0.121 Sum_probs=60.7
Q ss_pred cchhHhHHHHHhhcCCCcccccCceeeEEcceeEEeecCCCcEEEEcceEeeecccceeeccccccccc
Q psy16975 6 HFGVWLIEEFLIGLASGSHIKVPGVEMIPVEAFRLVPHSSGSYIVVDGEVLDYGPIQAEIFPGLIERTV 74 (728)
Q Consensus 6 ~~~r~~~l~~~~~~~~g~h~~~~~v~~~~v~a~rl~p~~~~g~i~vDGE~~~~~~~q~ev~~~l~~~~~ 74 (728)
.+++++++.++..+-.|+|...+.|+|.+++.++|++.. .-.+.+|||.+...|++++++|+..+.+.
T Consensus 248 ~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~~-~~~~~iDGE~~~~~~i~i~v~p~~l~v~~ 315 (337)
T 2qv7_A 248 KSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFT-DLQLNVDGEYGGKLPANFLNLERHIDVFA 315 (337)
T ss_dssp CCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECSS-CCEEEETTEEEEESCEEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEECC-CCeEEECCCcCCCCcEEEEEEcCeEEEEe
Confidence 368899999999999999999999999999999999753 57899999999999999999999985544
No 127
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.00027 Score=79.16 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=33.8
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
+.++||+|||||.+|+++|+.|++ .|++|+|||++..+
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~~G 46 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKALG 46 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSCTT
T ss_pred cccCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCCcC
Confidence 346899999999999999999999 89999999998543
No 128
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.99 E-value=0.00029 Score=81.85 Aligned_cols=40 Identities=28% Similarity=0.248 Sum_probs=34.2
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD 288 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g~ 288 (728)
|...+||+|||||++|+++|++|++ +|++|+|||+.....
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~--~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVG--AGYKVAMFDIGEIDS 82 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCCCS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHh--CCCcEEEEeccCCCC
Confidence 3457899999999999999999999 999999999986544
No 129
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.99 E-value=0.00027 Score=79.65 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=33.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~g 287 (728)
.++||+|||||..|+++|+.|++ .|++|+|||++..+
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~--~G~~V~liE~~~~G 43 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKK--HTDKVVLIEGGAYG 43 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT--TCSCEEEEESSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCC
Confidence 35899999999999999999999 89999999997644
No 130
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.95 E-value=0.00044 Score=80.11 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||.+|+++|++|++ .|.+|+|||+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecc
Confidence 46899999999999999999999 899999999973
No 131
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.91 E-value=0.00038 Score=78.63 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=33.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||++|+++|+.|++ .|.+|+|||+..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liEk~~ 125 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL--LGARVVLVEKRI 125 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCS
T ss_pred cCCCCEEEECccHHHHHHHHHHHH--CCCeEEEEEecc
Confidence 346899999999999999999999 899999999975
No 132
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.90 E-value=0.00035 Score=78.28 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=33.3
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
|+.++||+|||||.+|+++|+.|++ .|++|+|||+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~ 38 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERY 38 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 4557899999999999999999999 89999999994
No 133
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.89 E-value=0.0005 Score=79.88 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=32.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||.+|+++|++|++ .|.+|+|||+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR--MGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHh--CCCCEEEEeecc
Confidence 57899999999999999999999 899999999973
No 134
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.89 E-value=0.00027 Score=79.52 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=32.6
Q ss_pred cceEEEeecceechhhHHHhhhhCC-CCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFP-NCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIEk~~~ 286 (728)
++||+|||||++|+++|++|++..+ |++|+|||++..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCc
Confidence 4799999999999999999999322 999999999864
No 135
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.89 E-value=0.0003 Score=78.57 Aligned_cols=36 Identities=19% Similarity=0.465 Sum_probs=32.9
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
|+.++||+|||||.+|+++|+.|++ .|++|+|||+.
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~ 37 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQ--LGFNTACVEKR 37 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecC
Confidence 3456899999999999999999999 89999999994
No 136
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.89 E-value=0.00046 Score=80.13 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=32.9
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
....+||+|||||.+|+++|++|++ .|.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVAR--GGLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHH--CCCcEEEEEecc
Confidence 3457899999999999999999999 899999999974
No 137
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.88 E-value=0.00037 Score=77.63 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||.+|+++|+.|++ .|++|+|||++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~ 37 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPKYW 37 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCC
Confidence 5899999999999999999999 8999999999843
No 138
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.87 E-value=0.00041 Score=77.37 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=31.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||++|+++|++|++..+|++|+|||++..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 4699999999999999999999444999999999753
No 139
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.84 E-value=0.00041 Score=82.60 Aligned_cols=36 Identities=39% Similarity=0.446 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||++|+++|++|++ .|++|+|+|+..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~--~g~~v~v~E~~~ 369 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHN--FGIKVTVLEAKD 369 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEeccc
Confidence 346899999999999999999999 899999999964
No 140
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.81 E-value=0.00079 Score=78.38 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=32.8
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||++||++|+.|++. .|++|+||||..
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~-~G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTC-TTSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 3568999999999999999999982 489999999975
No 141
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.80 E-value=0.00051 Score=76.58 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=32.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++||+|||||.+|+++|++|++ .|++|+|||++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 5799999999999999999999 899999999983
No 142
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.79 E-value=0.00053 Score=78.12 Aligned_cols=37 Identities=27% Similarity=0.301 Sum_probs=33.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+..+||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~ 49 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRE--LGRSVHVIETAG 49 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 3457899999999999999999999 899999999975
No 143
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.79 E-value=0.00051 Score=71.37 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
++||+|||||.+|+++|++|++ .|++|+|||+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR--KGIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCC
Confidence 3799999999999999999999 89999999864
No 144
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.78 E-value=0.00064 Score=76.14 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=32.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+..+||+|||||.+|+++|++|++ .|++|+|||+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~--~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL--NGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCEEEEEEec
Confidence 357899999999999999999999 89999999964
No 145
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.77 E-value=0.00059 Score=78.67 Aligned_cols=37 Identities=38% Similarity=0.541 Sum_probs=33.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...||+||||||.+||.+|..|++. ++++|+|||++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 4579999999999999999999974 689999999975
No 146
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.75 E-value=0.00058 Score=77.00 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=32.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||.+|+++|+.|++ .|++|+|||++..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR--HNAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCc
Confidence 5799999999999999999999 8999999999853
No 147
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.75 E-value=0.00051 Score=78.42 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.3
Q ss_pred CcceEEEeecceechhhHHHhh-hhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQ-RRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La-~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||++|+++|+.|+ + .|++|+|||+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~--~G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE--LGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEECCC
Confidence 4689999999999999999999 7 899999999964
No 148
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.74 E-value=0.00083 Score=76.15 Aligned_cols=37 Identities=24% Similarity=0.222 Sum_probs=33.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++..+||+|||||..|+++|+.|++ .|++|+|||+..
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccC
Confidence 3457899999999999999999999 899999999964
No 149
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.74 E-value=0.00061 Score=75.48 Aligned_cols=36 Identities=36% Similarity=0.506 Sum_probs=32.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+||+|||||.+|+++|++|++..++++|+|||++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 479999999999999999999954589999999975
No 150
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.72 E-value=0.0006 Score=75.71 Aligned_cols=35 Identities=26% Similarity=0.662 Sum_probs=32.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||.+|+++|++|++..+|++|+|||++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 59999999999999999999944499999999986
No 151
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.71 E-value=0.00071 Score=75.35 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+||+|||||++|+++|++|++ .|+ +|+|+|+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~--~g~~~v~~~e~~~ 38 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE--AGITDLLILEATD 38 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH--TTCCCEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--cCCCceEEEeCCC
Confidence 45799999999999999999999 898 899999964
No 152
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.71 E-value=0.00069 Score=79.57 Aligned_cols=36 Identities=31% Similarity=0.371 Sum_probs=33.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||.+|+++|++|++ +|++|+|||+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~--~G~~V~liE~~~ 424 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGV--RGYDVVLAEAGR 424 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHH--CCCeEEEEecCC
Confidence 456899999999999999999999 899999999964
No 153
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.69 E-value=0.00069 Score=74.22 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=32.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCc--EEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCD--VTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~--VtVIEk~~ 285 (728)
++++||+|||||++|+++|++|++ .|++ |+|||++.
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~--~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQ--NGFEGRVLVIGREP 44 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH--TTCCSCEEEEESSS
T ss_pred CCCCcEEEECChHHHHHHHHHHHc--cCcCCCEEEEecCC
Confidence 356899999999999999999999 7776 99999975
No 154
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.68 E-value=0.00064 Score=75.90 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||.+|+++|+.|++ .|++|+|||++.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ--LGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCC
Confidence 46899999999999999999999 899999999974
No 155
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.67 E-value=0.00071 Score=74.55 Aligned_cols=35 Identities=31% Similarity=0.660 Sum_probs=31.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||++|+++|++|++..+|++|+|||++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 58999999999999999999954689999999975
No 156
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.65 E-value=0.00066 Score=76.56 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=32.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+||||+|.+|+.+|..|++. ++++|+|||++.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~ 51 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGE 51 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSB
T ss_pred CCCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCC
Confidence 3479999999999999999999984 689999999974
No 157
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.64 E-value=0.00078 Score=77.00 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=33.1
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 346899999999999999999999 899999999974
No 158
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.63 E-value=0.00074 Score=74.93 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=32.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||.+|+++|++|++ .|++|+|||++..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCC
Confidence 5799999999999999999999 8999999999843
No 159
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=96.62 E-value=0.0019 Score=68.23 Aligned_cols=70 Identities=11% Similarity=0.127 Sum_probs=55.6
Q ss_pred chhHhHHHHHhhcCCCcccccCceeeEEcceeEEeecCCCcEEEEcceEeeecccceeeccccccccccccc
Q psy16975 7 FGVWLIEEFLIGLASGSHIKVPGVEMIPVEAFRLVPHSSGSYIVVDGEVLDYGPIQAEIFPGLIERTVTTEY 78 (728)
Q Consensus 7 ~~r~~~l~~~~~~~~g~h~~~~~v~~~~v~a~rl~p~~~~g~i~vDGE~~~~~~~q~ev~~~l~~~~~~~~~ 78 (728)
.+++.+..+|..+-.|. ...++|+|.+++.++|++.. .-.+.+|||.+...|++++|+|+..+.++.+++
T Consensus 232 ~~~~~l~~l~~~~~~g~-~~~~~v~~~~~~~v~i~~~~-~~~~~~DGE~~~~~p~~i~v~p~al~v~~p~~~ 301 (304)
T 3s40_A 232 TGIQAFKDYIGKKLFED-SNENDIFHVKAKSIHIETEE-EKEVDTDGESSLHTPCQIELLQGHFTMIYNPAV 301 (304)
T ss_dssp TCHHHHHHHTTCCCSSC-CCTTTEEEEEESEEEEEESS-CCEEEEC--CCEESSEEEEEEEEEEEEECCTTT
T ss_pred CCHHHHHHHHHHHhcCC-CCCCcEEEEEccEEEEEeCC-CcEEEeCCCCCCCceEEEEEECCeEEEEechhh
Confidence 45666666666666665 78899999999999999876 468999999999999999999999967665554
No 160
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.61 E-value=0.00093 Score=74.95 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=32.3
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||..|+++|+.|++ .|++|+|||+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQ--LGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEEecc
Confidence 46899999999999999999999 899999999843
No 161
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.61 E-value=0.00094 Score=74.62 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=32.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||.+|+++|++|++ .|++|+|||+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~--~G~~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA--KGYEVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeccC
Confidence 46799999999999999999999 899999999974
No 162
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.61 E-value=0.00075 Score=77.21 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=32.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 456899999999999999999999 899999999964
No 163
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.59 E-value=0.00085 Score=74.66 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=32.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++||+|||||.+|+++|+.|++ .|++|+|||++.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~--~g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ--LGFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 46899999999999999999999 799999999973
No 164
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.59 E-value=0.00087 Score=74.76 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=32.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
++||+|||||.+|+++|+.|++ .|++|+|||++..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~--~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ--LGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCCC
Confidence 6899999999999999999999 8999999999863
No 165
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.59 E-value=0.0011 Score=76.27 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=32.3
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.+||+||||||.+||.+|..|++. +.++|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 469999999999999999999993 3489999999753
No 166
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.58 E-value=0.0013 Score=75.48 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+||||||.+|+.+|..|++. ++++|+|||++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCC
Confidence 58999999999999999999984 789999999974
No 167
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.55 E-value=0.00096 Score=73.70 Aligned_cols=36 Identities=25% Similarity=0.566 Sum_probs=32.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
++.+||+|||||.+|+++|+.|++ .|+ +|+|||++.
T Consensus 2 ~~~~~vvIIGgG~aGl~aA~~l~~--~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 2 NANDNVVIVGTGLAGVEVAFGLRA--SGWEGNIRLVGDAT 39 (431)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSCC
T ss_pred CCCCcEEEEcCHHHHHHHHHHHHc--cCcCCCEEEEECCC
Confidence 346899999999999999999999 777 799999864
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.55 E-value=0.00092 Score=72.42 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=30.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCC--CcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPN--CDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G--~~VtVIEk~~ 285 (728)
+.++||+|||||++|+++|+.|++ .| .+|+|+|++.
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~--~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRK--LDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHT--TCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHh--hCCCCCEEEEECCC
Confidence 346899999999999999999999 66 5799999874
No 169
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.51 E-value=0.0011 Score=76.22 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=33.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+.+||+|||||++|+++|++|++..+|++|+|||++..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 45799999999999999999999444899999999753
No 170
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.51 E-value=0.00099 Score=75.86 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=33.5
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
...+|++|||+|.+|+++|++|++ .|++|+|||++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~--~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE--AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCCC
Confidence 357899999999999999999999 8999999999853
No 171
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.49 E-value=0.0011 Score=73.59 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=31.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++||+|||||.+|+++|++|++ .|++|+|||++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ--LGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHH--CCCeEEEEeCCC
Confidence 3799999999999999999999 899999999973
No 172
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.47 E-value=0.0011 Score=72.55 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=31.4
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||.+|+.+|++|++ .|++|+|+|+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~--~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR--LGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHH--CCCcEEEEeccC
Confidence 589999999999999999999 999999999875
No 173
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.44 E-value=0.00075 Score=74.74 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=32.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC-----CcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN-----CDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G-----~~VtVIEk~~ 285 (728)
..+||+|||||.+|+++|++|++ .| .+|+|||+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE--RAQAQGALEVLFLDKQG 68 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH--HHHHHCCCCEEEEESCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--cccccCcccEEEEecCC
Confidence 35799999999999999999999 77 8999999976
No 174
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.43 E-value=0.0009 Score=75.36 Aligned_cols=36 Identities=36% Similarity=0.457 Sum_probs=32.6
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+...+||+|||||++|+++|++|++ . ++|+|||++.
T Consensus 105 ~~~~~dVvIIGgG~aGl~aA~~L~~--~-~~V~vie~~~ 140 (493)
T 1y56_A 105 ERVVVDVAIIGGGPAGIGAALELQQ--Y-LTVALIEERG 140 (493)
T ss_dssp EEEEESCCEECCSHHHHHHHHHHTT--T-CCEEEECTTS
T ss_pred ccccCCEEEECccHHHHHHHHHHHh--c-CCEEEEeCCC
Confidence 3456899999999999999999999 7 9999999975
No 175
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.43 E-value=0.00092 Score=74.41 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=32.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.++||+|||||.+|+++|+.|++ .|++|+|||++..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~ 39 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ--LGIPTVLVEGQAL 39 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HTCCEEEECSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEccCCC
Confidence 35799999999999999999999 7999999999654
No 176
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.42 E-value=0.0015 Score=76.30 Aligned_cols=36 Identities=36% Similarity=0.517 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||++|+++|++|++ .|++|+|+|+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~--~g~~v~~~e~~~ 140 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARD 140 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEecCC
Confidence 346799999999999999999999 999999999964
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.39 E-value=0.0013 Score=71.76 Aligned_cols=33 Identities=30% Similarity=0.510 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
.||+|||||++|+++|++|++ .|+ +|+|||++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~--~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ--AKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh--hCcCCCEEEEeCCC
Confidence 489999999999999999999 787 899999975
No 178
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.38 E-value=0.0013 Score=72.57 Aligned_cols=36 Identities=33% Similarity=0.440 Sum_probs=31.7
Q ss_pred cceEEEeecceechhhHHHhhh-hCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQR-RFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~-~~~G~~VtVIEk~~ 285 (728)
..||+|||||.+|+++|++|++ ..+|++|+|||+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4699999999999999999998 23589999999975
No 179
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.37 E-value=0.0012 Score=72.00 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=31.4
Q ss_pred ceEEEeecceechhhHHHhhh-hCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQR-RFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~-~~~G~~VtVIEk~~ 285 (728)
.||+|||||++|+++|++|++ ..+|++|+|||++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 489999999999999999998 44689999999975
No 180
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.37 E-value=0.0014 Score=73.77 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=29.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEee
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIA 282 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIE 282 (728)
.++||+|||||.+|+++|++|++. .|++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASL-HKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHH-HCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHH-cCCEEEEEe
Confidence 358999999999999999999983 489999999
No 181
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.33 E-value=0.0015 Score=73.44 Aligned_cols=39 Identities=18% Similarity=0.350 Sum_probs=34.1
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++..+||+|||||.+|+++|+.|.+...+.+|+|||++.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 456789999999999999999998844589999999974
No 182
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.31 E-value=0.0015 Score=73.60 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=31.4
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeec
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk 283 (728)
|..++||+|||||.+|+++|++|++. .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATL-YGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHH-HCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHh-cCCeEEEEec
Confidence 44578999999999999999999983 3899999993
No 183
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.28 E-value=0.0018 Score=75.80 Aligned_cols=37 Identities=35% Similarity=0.425 Sum_probs=32.3
Q ss_pred CcceEEEeecceechhhHHHhhhh---CCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRR---FPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~---~~G~~VtVIEk~~ 285 (728)
..+||+|||||++||++|+.|++. ..|++|+||||..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 468999999999999999999982 1489999999974
No 184
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.27 E-value=0.0018 Score=70.97 Aligned_cols=33 Identities=33% Similarity=0.581 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCc--EEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCD--VTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~--VtVIEk~~ 285 (728)
.+|+|||||++|+++|++|++ .|++ |+|||++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~--~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA--EGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHc--cCcCCeEEEEECCC
Confidence 489999999999999999999 7776 99999975
No 185
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.27 E-value=0.0019 Score=77.60 Aligned_cols=36 Identities=36% Similarity=0.517 Sum_probs=32.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
....+|+|||||++||++|++|++ .|++|+|+|+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~--~g~~v~v~E~~~ 311 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARD 311 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEecC
Confidence 346799999999999999999999 999999999864
No 186
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.20 E-value=0.0023 Score=75.58 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||.+|+++|+.|++ .|++|+|||+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~ 422 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAE 422 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 346799999999999999999999 899999999964
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.20 E-value=0.0022 Score=73.75 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=31.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+||+|||||.+|+++|++|++ .|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHh--CCCeEEEEecc
Confidence 46899999999999999999999 89999999984
No 188
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.20 E-value=0.0021 Score=72.83 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=32.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+..+||+|||||.+|+++|++|++ .|++|+|+|+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~ 244 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGER 244 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred cCcccEEEECCcHHHHHHHHHHHh--CCCeEEEEECC
Confidence 346899999999999999999999 89999999874
No 189
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.10 E-value=0.0019 Score=71.57 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=31.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||.+|+++|+.|++..+|.+|+|||++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 48999999999999999999943499999999975
No 190
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.10 E-value=0.0023 Score=72.81 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=31.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.||+|||||.+|+++|++|++..++++|+|||++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 48999999999999999999954489999999975
No 191
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.03 E-value=0.0028 Score=70.11 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=31.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+||+|||||.+|+++|+.|++..+|.+|+|||++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 38999999999999999999943499999999975
No 192
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.01 E-value=0.0028 Score=69.91 Aligned_cols=35 Identities=31% Similarity=0.660 Sum_probs=31.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|||||||.+|+++|++|++..++++|||||++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999855668999999974
No 193
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.98 E-value=0.0028 Score=70.87 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=32.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.+||+|||||.+|+++|+.|++..+|.+|+|||++..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 3599999999999999999998434899999999753
No 194
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.97 E-value=0.0024 Score=69.86 Aligned_cols=35 Identities=31% Similarity=0.473 Sum_probs=31.3
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
+.+||+|||||.+|+++|++|++ .|+ +|+|||++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQ--AGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHH--HTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHc--cCCCCeEEEEECCC
Confidence 46799999999999999999999 666 599999975
No 195
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.97 E-value=0.0029 Score=70.67 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhC-CCCc---EEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRF-PNCD---VTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~-~G~~---VtVIEk~~ 285 (728)
+||+|||||.+|+++|.+|++.. .|++ |+|||+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCC
Confidence 69999999999999999999722 4788 99999974
No 196
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.96 E-value=0.0021 Score=72.16 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCC---CcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPN---CDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G---~~VtVIEk~~ 285 (728)
++||+|||||.+|+++|..|++ .| .+|+|||++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~--~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLT--NYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh--cCCCCCeEEEEECCC
Confidence 5899999999999999999999 55 9999999975
No 197
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.94 E-value=0.0037 Score=73.03 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=33.0
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||.+|+++|+.|++ .|++|+|||++.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~ 406 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHS 406 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCC
Confidence 346799999999999999999999 899999999974
No 198
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.90 E-value=0.002 Score=75.79 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCC--------CcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPN--------CDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G--------~~VtVIEk~~ 285 (728)
..+|+|||||++||++|++|++ .| ++|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~--~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR--LAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--HHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCcccccCCCceEEEEeccC
Confidence 4689999999999999999999 67 9999999874
No 199
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.87 E-value=0.0037 Score=70.64 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=34.0
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+...+|++|||+|.+|+++|+.|++ +|.+|+|||++.
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~~ 44 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQ--AGIPTQIVEMGR 44 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCC
Confidence 3457999999999999999999999 899999999974
No 200
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.87 E-value=0.0028 Score=72.15 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=32.7
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
..++|+||||||.+|+.+|..|++ |.+|+|||++..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~ 59 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBC
T ss_pred cCcccEEEECccHHHHHHHHHHhc---CCcEEEEecCCC
Confidence 457999999999999999999998 689999999853
No 201
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.87 E-value=0.0033 Score=70.94 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=32.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|++|||+|.+|+++|+.|++ .|.+|+|||++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE--AGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCC
Confidence 46899999999999999999999 899999999975
No 202
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.85 E-value=0.0033 Score=71.78 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=33.0
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
+.+|++|||+|.+|+++|++|++. +|.+|+|||++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCc
Confidence 578999999999999999999992 3899999999753
No 203
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.72 E-value=0.0043 Score=75.66 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.2
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+||+|||||.+|+++|++|++ .|++|+|||++.
T Consensus 126 ~~~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~ 161 (965)
T 2gag_A 126 HVHTDVLVVGAGPAGLAAAREASR--SGARVMLLDERA 161 (965)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCC
Confidence 346899999999999999999999 899999999974
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.65 E-value=0.0043 Score=67.02 Aligned_cols=33 Identities=36% Similarity=0.439 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.||+|||||.+|+++|..|++ .| +|+|||++..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCCC
Confidence 589999999999999999999 78 9999999763
No 205
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.57 E-value=0.0041 Score=69.35 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=32.0
Q ss_pred cceEEEeecceechhhHHHhhh-hCC----CCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQR-RFP----NCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~-~~~----G~~VtVIEk~~ 285 (728)
.+||+|||||.+|+++|..|++ ..+ |++|+|||+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 5799999999999999999988 533 89999999974
No 206
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.56 E-value=0.0055 Score=66.37 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=30.4
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|||||||.+|+++|.+|++..++.+|+|||++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 6999999999999999999854567999999875
No 207
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=95.51 E-value=0.0078 Score=64.28 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=53.6
Q ss_pred hHhHHHHHhhcCCCcccccCceeeEEcceeEEeecCCCcEEEEcceEeeecccceeeccccccccc
Q psy16975 9 VWLIEEFLIGLASGSHIKVPGVEMIPVEAFRLVPHSSGSYIVVDGEVLDYGPIQAEIFPGLIERTV 74 (728)
Q Consensus 9 r~~~l~~~~~~~~g~h~~~~~v~~~~v~a~rl~p~~~~g~i~vDGE~~~~~~~q~ev~~~l~~~~~ 74 (728)
++ ++.++..+-+| |.. +.|.+.+++.++|++.. ...+.+|||.+...|++++|+|+..+.++
T Consensus 255 ~~-~l~~~~~~~~g-~~~-~~v~~~~~~~i~I~~~~-~~~~~iDGE~~~~~~~~i~v~p~al~vl~ 316 (332)
T 2bon_A 255 EI-LPALVSTLKSD-EDN-PNIIEGASSWFDIQAPH-DITFNLDGEPLSGQNFHIEILPAALRCRL 316 (332)
T ss_dssp SC-CHHHHHHHHTT-CCC-TTEEEEEESEEEEEEEE-EEEEEETTEEEEEEEEEEEEEEEEEEEEE
T ss_pred HH-HHHHHHHHHcC-CCC-CcEEEEEeeEEEEEECC-CCeEEecCCCCCCceEEEEEECCeeEEEe
Confidence 55 78888888889 887 99999999999999743 46899999999999999999999985554
No 208
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.47 E-value=0.0077 Score=68.76 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=32.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
.||++|||||-.|.++|..+++ .|.+|+|||+..+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~--~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA--HGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT--TTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecccc
Confidence 4899999999999999999999 8999999997653
No 209
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.42 E-value=0.0064 Score=70.04 Aligned_cols=37 Identities=35% Similarity=0.588 Sum_probs=33.4
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+|++|||+|.+|+++|+.|++. +|.+|+|||++.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~ 58 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGF 58 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 3579999999999999999999984 689999999974
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.29 E-value=0.0076 Score=73.97 Aligned_cols=35 Identities=34% Similarity=0.437 Sum_probs=32.1
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+||+|||||.+|+++|++|++ .|+ +|+|+|+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~--~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR--LGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCcEEEEeCCC
Confidence 36799999999999999999999 899 799999964
No 211
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.29 E-value=0.0073 Score=65.76 Aligned_cols=35 Identities=34% Similarity=0.404 Sum_probs=31.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++.+|+|||||.+|+++|..|+. ++.+|+|||++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~ 42 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG--KCDDITMINSEK 42 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCC
Confidence 34579999999999999999966 899999999975
No 212
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.18 E-value=0.0076 Score=67.26 Aligned_cols=37 Identities=19% Similarity=0.433 Sum_probs=31.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+||+|||||.+|+++|..|++..++++|+|||+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3569999999999999999999932239999999975
No 213
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.09 E-value=0.0089 Score=67.48 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=31.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+.+|||||||.+|+++|..|.+ .+++|||||++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDT--KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCCC
Confidence 35689999999999999999998 899999999963
No 214
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.71 E-value=0.015 Score=64.38 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=29.6
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|+|||||.+|+++|..|++.....+|+|||++.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 5999999999999999999843447899999974
No 215
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.48 E-value=0.018 Score=66.82 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=34.3
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+++|||+|||+|+.|+..|..|++ .|.+|.+|||..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~--~g~~vl~id~~~ 41 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSR--SGQRVLHVDSRS 41 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHh--CCCEEEEEcCCC
Confidence 4568999999999999999999999 899999999975
No 216
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.65 E-value=0.036 Score=50.10 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|+|||+|-+|...|..|++ .|++|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 479999999999999999999 899999999853
No 217
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.30 E-value=0.038 Score=58.80 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||||.+|..+|..++. .|++|+++|...
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 3479999999999999999999 999999999764
No 218
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.29 E-value=0.045 Score=47.85 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCC-CcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~ 285 (728)
..|+|+|+|.+|..+|..|.+ .| ++|+++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT--SSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCH
Confidence 479999999999999999999 88 9999999864
No 219
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.28 E-value=0.043 Score=56.97 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|.+|.++|..|++ .|++|+++|+..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCH
Confidence 4579999999999999999999 899999999864
No 220
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.19 E-value=0.046 Score=50.03 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|+|+|-+|.++|..|.+ .|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~--~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTA--AGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEECCH
Confidence 479999999999999999999 899999999864
No 221
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.05 E-value=0.061 Score=49.52 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=31.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+.+|+|||+|-+|..+|..|.+ .|++|+++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCH
Confidence 4579999999999999999999 899999999974
No 222
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.03 E-value=0.048 Score=56.98 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|.++|..|++ .|++|+++|+..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~--~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAA--TGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 469999999999999999999 899999999864
No 223
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.91 E-value=0.061 Score=50.33 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|-+|..+|..|.+ .|++|+++|+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 4579999999999999999999 899999999864
No 224
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.59 E-value=0.068 Score=49.81 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+|+|+|+|-+|...|..|.+ .|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 4579999999999999999999 89999999996
No 225
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.49 E-value=0.059 Score=58.10 Aligned_cols=36 Identities=36% Similarity=0.401 Sum_probs=32.3
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..++|.|||+|.+|.+.|..|++ .|++|++++++.
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~--~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLAR--KGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHT--TTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 345689999999999999999999 899999999863
No 226
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=92.36 E-value=0.033 Score=62.67 Aligned_cols=50 Identities=16% Similarity=0.283 Sum_probs=33.9
Q ss_pred cCcceEEEeecceechhhHHHhhhhC------------CCCcEEEeecccccccCCCCccccccCC
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRF------------PNCDVTVIADKFNMDTTSDGAAGLFEPS 301 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~------------~G~~VtVIEk~~~g~gAS~~agGii~p~ 301 (728)
..-+||||||||..||++|.+|.+.. .+..+..+|+..- -+|+.|++.+.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~----f~Wh~g~~~p~ 98 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQ----FAWHSGMLVPG 98 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSS----CCSSGGGCCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCC----CCcCCCCCCCC
Confidence 34589999999999999999998720 1234566666431 12566666553
No 227
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.08 E-value=0.066 Score=56.49 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|+|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK--TGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH--TTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCh
Confidence 479999999999999999999 899999999964
No 228
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.08 E-value=0.069 Score=56.14 Aligned_cols=33 Identities=36% Similarity=0.502 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|+|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCc
Confidence 479999999999999999999 899999999864
No 229
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.94 E-value=0.079 Score=50.81 Aligned_cols=34 Identities=29% Similarity=0.209 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCC-CCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFP-NCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIEk~~ 285 (728)
..+|+|||+|-+|..+|..|.+ . |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCH
Confidence 4579999999999999999999 8 99999999864
No 230
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.87 E-value=0.075 Score=56.38 Aligned_cols=34 Identities=24% Similarity=0.108 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++|+|||+|.+|...|..|++ .|++|+++++..
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 4589999999999999999999 899999999853
No 231
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.63 E-value=0.083 Score=56.10 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=30.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|.+.|..|++ .|++|+++|+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~--~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 479999999999999999999 899999999864
No 232
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.26 E-value=0.085 Score=55.72 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=31.1
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
+...|+|||+|.+|.++|+.|++ .|+ +|+++|+..
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIAE 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCc
Confidence 44589999999999999999999 788 999999863
No 233
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.20 E-value=0.096 Score=55.62 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=30.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
++|+|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~--~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL--AGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH--TTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCEEEEEECh
Confidence 479999999999999999999 89999999985
No 234
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.13 E-value=0.1 Score=58.23 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=31.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|.++|..|++ .|++|+++|+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~--aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGL--AGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEECcH
Confidence 479999999999999999999 999999999875
No 235
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.04 E-value=0.11 Score=47.02 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=30.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|+|+|-+|..+|..|.+ .|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR--MGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 369999999999999999999 899999999863
No 236
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=90.84 E-value=0.12 Score=56.83 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=31.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+++|||+|.+|+.+|..|++ .|.+|+|+|+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~--~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK--AGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCeEEEEecCc
Confidence 34689999999999999999999 899999999864
No 237
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.83 E-value=0.11 Score=58.36 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+++|.|||+|.+|+.+|..|++ .|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~--~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD--IGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHh--CCCEEEEEECCH
Confidence 4589999999999999999999 899999999863
No 238
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.82 E-value=0.12 Score=54.67 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=31.6
Q ss_pred cCcceEEEeecceechhhHHHhhhhCCCC-cEEEeecc
Q psy16975 248 GSNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADK 284 (728)
Q Consensus 248 ~~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~ 284 (728)
+...+|+|||+|.+|.++|+.|+. .|+ +|+++|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~--~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ--KELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEecc
Confidence 445689999999999999999999 888 99999987
No 239
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.81 E-value=0.12 Score=57.95 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCC-CC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFP-NC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~-G~-~VtVIEk~~ 285 (728)
..++|.|||+|.+|+.+|..|++ . |+ +|+++|++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNS 53 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECCh
Confidence 34589999999999999999999 8 99 999999875
No 240
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.74 E-value=0.11 Score=53.73 Aligned_cols=33 Identities=36% Similarity=0.458 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ--GGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHh--CCCcEEEEECCH
Confidence 379999999999999999999 899999999853
No 241
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.74 E-value=0.11 Score=55.39 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+|+|||||-+|.++|+.|++ .|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCh
Confidence 4689999999999999999999 787 899999864
No 242
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.71 E-value=0.12 Score=53.93 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=31.5
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|++..+|.|||.|.+|...|..|++ .|++|+++|+..
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~--~G~~V~~~dr~~ 48 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTE--WPGGVTVYDIRI 48 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTT--STTCEEEECSST
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 3345689999999999999999999 899999999864
No 243
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.70 E-value=0.11 Score=57.72 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=30.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|+.+|..|++ .|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~--~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE--LGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHh--cCCEEEEEECCH
Confidence 479999999999999999999 899999999864
No 244
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.60 E-value=0.089 Score=54.80 Aligned_cols=33 Identities=36% Similarity=0.491 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|+|||+|-+|.+.|..|++ .|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~--~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQ--SLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHH--CCCeEEEEEecc
Confidence 479999999999999999999 789999999973
No 245
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.37 E-value=0.12 Score=53.42 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=29.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+|+|||||.+|+-+|..|++ .|.+|+|+++.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 177 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTK--FADKVTIVHRR 177 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEecc
Confidence 479999999999999999999 89999999975
No 246
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.34 E-value=0.095 Score=54.56 Aligned_cols=31 Identities=29% Similarity=0.309 Sum_probs=29.3
Q ss_pred ceEEEeecceechhhHHHhhhhCC-----C-CcEEEeec
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFP-----N-CDVTVIAD 283 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~-----G-~~VtVIEk 283 (728)
++|.|||+|.+|.+.|..|++ . | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~--~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL--RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh--CccccCCCCCEEEEEc
Confidence 589999999999999999999 7 8 99999998
No 247
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.32 E-value=0.15 Score=51.71 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..++|.|||+|.+|.+.|..|.+ .|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~--~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDS--VGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHH--TTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHH--CCCEEEEecCH
Confidence 34579999999999999999999 89999999984
No 248
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.25 E-value=0.14 Score=50.91 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEE-eeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTV-IADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtV-IEk~~ 285 (728)
..+|.|||+|-+|.+.|..|++ .|++|++ +++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCCH
Confidence 4589999999999999999999 8999998 77753
No 249
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.23 E-value=0.14 Score=50.71 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=30.0
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|+|||+|-+|...|..|.+ .|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS--RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH--TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 59999999999999999999 899999999864
No 250
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.14 E-value=0.14 Score=55.29 Aligned_cols=37 Identities=14% Similarity=0.256 Sum_probs=31.8
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|+...+|.|||.|.+|...|..|++ .|++|+++|+..
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~--~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRK--GGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 5556789999999999999999999 899999999864
No 251
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.99 E-value=0.16 Score=54.02 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=30.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+|+|||||-+|.++|+.|+. .|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCH
Confidence 4589999999999999999999 787 899999753
No 252
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.98 E-value=0.14 Score=57.46 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|.+|.++|..|++ .|++|+++|+..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~--aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS--HGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCeEEEEECCH
Confidence 3479999999999999999999 899999999864
No 253
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.96 E-value=0.074 Score=56.16 Aligned_cols=56 Identities=32% Similarity=0.542 Sum_probs=44.2
Q ss_pred EeeecccCccchhhhhhhhhccc-ccccceeeccccccccccCcceEEeecCceEEE
Q psy16975 635 VHRFKAAGGKVIEKYISSFSELG-SEYNTIFNCTGLGARTLCNDMHVIPVRGQTIRI 690 (728)
Q Consensus 635 ~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~nc~g~~~~~~~~d~~~~~~~g~~~~v 690 (728)
...+..+|++|....+.++++.. -.+|.||||||.++..|.+|..++|.|||.+.+
T Consensus 149 ~~~~~~~Gv~i~~~~V~~i~~~~~~~a~~VV~A~G~~s~~l~~~~~l~p~rg~~~~~ 205 (351)
T 3g3e_A 149 TERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRGQIMKV 205 (351)
T ss_dssp HHHHHHTTCEEEECCCCCHHHHHHTTCSEEEECCGGGGGGTSCCTTCEEEEEEEEEE
T ss_pred HHHHHHCCCEEEEEEeCCHHHhhcCCCCEEEECCCcChHhhcCCCceeecCCcEEEE
Confidence 34556788988776666665533 258999999999999999999999999988743
No 254
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.86 E-value=0.15 Score=52.18 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=29.9
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK--QGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHh--CCCCEEEEEcCc
Confidence 69999999999999999999 899999999864
No 255
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.81 E-value=0.15 Score=53.36 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
++|+|||+|-+|.+.|+.|++ .|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCh
Confidence 479999999999999999999 888 999999863
No 256
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.60 E-value=0.19 Score=52.62 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=32.2
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++....|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~--~g~~V~~~~~~~ 63 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLK--MGHTVTVWNRTA 63 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSG
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 3334689999999999999999999 899999999864
No 257
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=89.59 E-value=0.17 Score=52.06 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~--~G~~Vt~v~~~ 184 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTK--YGSKVIILHRR 184 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSS
T ss_pred CCeEEEECCChHHHHHHHHHHH--hCCeeeeeccc
Confidence 4579999999999999999999 89999999874
No 258
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=89.55 E-value=0.13 Score=55.90 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~--~g~~Vtvv~~~~ 179 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIID--SGTPASIGIILE 179 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCC
Confidence 3579999999999999999999 899999999864
No 259
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.48 E-value=0.17 Score=56.34 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|..+|..|++ .|++|+++|+..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR--VGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 479999999999999999999 899999999864
No 260
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.47 E-value=0.19 Score=52.74 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~--~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLK--NGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 3579999999999999999999 899999999864
No 261
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=89.38 E-value=0.16 Score=56.26 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=30.7
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+.+|..|++ .|.+|+|+|+..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCC
Confidence 589999999999999999999 899999999863
No 262
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.19 E-value=0.17 Score=56.48 Aligned_cols=36 Identities=28% Similarity=0.370 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++|.|||+|.+|+.+|..|++...|++|+++|+..
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 357999999999999999999932289999999863
No 263
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=89.04 E-value=0.19 Score=54.02 Aligned_cols=34 Identities=32% Similarity=0.464 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+.+|..|++ .|.+|+|+++..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS--GGYQLDVVAPCE 178 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCc
Confidence 4589999999999999999999 899999999864
No 264
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=88.90 E-value=0.18 Score=55.51 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+.+|..|++ .|.+|+|+|+..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCC
Confidence 579999999999999999999 899999999864
No 265
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.83 E-value=0.2 Score=49.41 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|-+|.+.|..|++ .|++|+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~--~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEI--AGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCH
Confidence 3479999999999999999999 899999999864
No 266
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.81 E-value=0.2 Score=52.23 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||+|.+|.+.|..|++ .|++|+++|+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR--AGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCeEEEEECCH
Confidence 4579999999999999999999 899999999864
No 267
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.75 E-value=0.21 Score=53.12 Aligned_cols=33 Identities=36% Similarity=0.454 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
.+|+|||||.+|.++|+.|+. .|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCH
Confidence 479999999999999999999 888 999999863
No 268
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.66 E-value=0.16 Score=56.20 Aligned_cols=33 Identities=21% Similarity=0.526 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+.+|..|++ .|.+|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRK--LGAQVSVVEARE 204 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCC
Confidence 479999999999999999999 899999999864
No 269
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.64 E-value=0.21 Score=52.88 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.++|.|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 4579999999999999999999 89999999985
No 270
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.63 E-value=0.2 Score=55.11 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAG 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCC
Confidence 3589999999999999999999 899999999863
No 271
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.61 E-value=0.21 Score=53.67 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=30.7
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE--AGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 589999999999999999999 899999999864
No 272
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.61 E-value=0.21 Score=55.07 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.8
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|.|||+|.+|+.+|..|++ .|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~--~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA--RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH--TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 69999999999999999999 899999999853
No 273
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.45 E-value=0.25 Score=52.06 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCE--AGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCCH
Confidence 3589999999999999999999 899999999864
No 274
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.31 E-value=0.25 Score=51.11 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLK--EGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHH--TTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 4579999999999999999999 899999999853
No 275
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.19 E-value=0.19 Score=53.87 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=29.6
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+|.|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~--~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK--KCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 79999999999999999999 89999999986
No 276
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=88.12 E-value=0.22 Score=55.17 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 216 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQP 216 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCC
Confidence 3589999999999999999999 899999999864
No 277
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.99 E-value=0.24 Score=55.01 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=31.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..+.|||.|.+|+.+|..|++ .|++|+++|++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~--~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD--FGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 3479999999999999999999 899999999874
No 278
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.93 E-value=0.21 Score=55.41 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=31.4
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
....|.|||.|.+||.+|..|++ .|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~--~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFAL--LGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHh--CCCcEEEEECCH
Confidence 34589999999999999999999 899999999763
No 279
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.93 E-value=0.19 Score=55.98 Aligned_cols=34 Identities=35% Similarity=0.458 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++|+|+|+|-+|.+.|..|.+ .|++|+|||++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~--~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG--ENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS--TTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHH--CCCCEEEEECCH
Confidence 4579999999999999999999 899999999863
No 280
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.93 E-value=0.25 Score=52.18 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=31.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC-CcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN-CDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~~ 285 (728)
+...|.|||+|.+|.+.|..|++ .| ++|+++|+..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~--~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGG--RNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHH--cCCCeEEEEeCCC
Confidence 34689999999999999999999 89 9999999874
No 281
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.81 E-value=0.27 Score=50.81 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .|++|+++|+..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHH--CCCeEEEEcCCH
Confidence 369999999999999999999 899999999864
No 282
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.67 E-value=0.26 Score=51.25 Aligned_cols=34 Identities=21% Similarity=0.644 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||||-+|++.|..|.+ .|.+|+|++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~--~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMP--TGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGG--GTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHh--CCCEEEEEcCCC
Confidence 4579999999999999999999 899999999864
No 283
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=87.62 E-value=0.24 Score=54.57 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 200 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVING--LGAKTHLFEMFD 200 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeCC
Confidence 479999999999999999999 899999999864
No 284
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.57 E-value=0.24 Score=52.75 Aligned_cols=34 Identities=35% Similarity=0.523 Sum_probs=29.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC--cEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~ 284 (728)
...+|+|||+|.+|.++|+.|+. .|+ +|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~--~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALIN--QGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEecc
Confidence 35689999999999999999999 665 89999975
No 285
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.38 E-value=0.3 Score=49.30 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=31.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~--~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALAD--LGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCh
Confidence 4579999999999999999999 899999999864
No 286
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.35 E-value=0.25 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|-+|.+.|..|++ .|.+|+|+++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY--PQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT--TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCCH
Confidence 4579999999999999999999 888999999863
No 287
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.32 E-value=0.26 Score=55.20 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|+.+|..|++...|++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 47999999999999999999932279999999853
No 288
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=87.21 E-value=0.29 Score=53.26 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART--AGVHVSLVETQP 178 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeCC
Confidence 4589999999999999999999 899999999864
No 289
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.20 E-value=0.28 Score=51.44 Aligned_cols=32 Identities=22% Similarity=0.482 Sum_probs=29.5
Q ss_pred eEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
+|+|||||-+|.++|+.|+. .|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCH
Confidence 69999999999999999999 788 999999864
No 290
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.99 E-value=0.28 Score=51.69 Aligned_cols=37 Identities=14% Similarity=0.228 Sum_probs=30.7
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCC----CcEEEeeccc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPN----CDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G----~~VtVIEk~~ 285 (728)
++..++|.|||+|.+|.+.|..|++ .| ++|+++++..
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~--~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTA--AGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHH--TTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHH--CCCCCcceEEEECCCc
Confidence 3445579999999999999999999 78 8999998863
No 291
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.98 E-value=0.33 Score=50.35 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK--AGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHh--CCCeEEEEcCCH
Confidence 479999999999999999999 899999999863
No 292
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.83 E-value=0.25 Score=50.31 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=31.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~ 286 (728)
..+|+|||+|-+|..+|..|++ .|. +|+|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~--~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS--AGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHH--cCCCeEEEEcCCCc
Confidence 4589999999999999999999 786 8999999864
No 293
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.81 E-value=0.3 Score=51.39 Aligned_cols=32 Identities=38% Similarity=0.520 Sum_probs=28.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+|+|||+|.+|.+.|..|++ .|++|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-Ec
Confidence 4579999999999999999999 89999999 54
No 294
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.80 E-value=0.24 Score=51.91 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=28.7
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeec
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk 283 (728)
+|.|||+|.+|.+.|..|++ .|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~--~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD--NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH--HCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh--CCCeEEEEEc
Confidence 59999999999999999999 8999999998
No 295
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.35 E-value=0.31 Score=53.92 Aligned_cols=33 Identities=42% Similarity=0.511 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRS--FGSEVTVVALED 199 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCC
Confidence 479999999999999999999 899999999863
No 296
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.34 E-value=0.33 Score=51.36 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
..+|+|||+|-+|.++|+.|+. .+. +|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~--~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL--RQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCh
Confidence 4689999999999999999999 666 899999763
No 297
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.22 E-value=0.35 Score=50.87 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=29.6
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|+|||+|.+|.++|+.|++...|++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 6999999999999999999832378999999864
No 298
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.20 E-value=0.36 Score=50.84 Aligned_cols=33 Identities=30% Similarity=0.445 Sum_probs=29.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
.+|+|||||-+|.++|+.|+. .|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~--~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA--KELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCCc
Confidence 479999999999999999999 776 899999753
No 299
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.20 E-value=0.37 Score=47.68 Aligned_cols=33 Identities=33% Similarity=0.287 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|-+|.+.|..|++ .|++|+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~--~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG--SGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 479999999999999999999 899999999863
No 300
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.10 E-value=0.43 Score=52.88 Aligned_cols=34 Identities=35% Similarity=0.281 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||.|.+|+++|..|++ +|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCc
Confidence 3579999999999999999999 999999999853
No 301
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.93 E-value=0.33 Score=50.06 Aligned_cols=32 Identities=38% Similarity=0.447 Sum_probs=30.0
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|.|||+|.+|.+.|..|++ .|++|+++|+..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVR--AGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHH--HTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHH--CCCeEEEEcCCH
Confidence 69999999999999999999 899999999864
No 302
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.90 E-value=0.28 Score=53.23 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=27.9
Q ss_pred ceEEEeecceechhhHHHhhhhCC-CCcEEEee
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFP-NCDVTVIA 282 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIE 282 (728)
++|+|||+|.+|.+.|..|++ . |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~--~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAAS--RDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTT--STTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCCEEEEEe
Confidence 379999999999999999987 5 99999999
No 303
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=85.88 E-value=0.36 Score=53.78 Aligned_cols=34 Identities=35% Similarity=0.451 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVD 227 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCeEEEEEccc
Confidence 4579999999999999999999 899999999864
No 304
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=85.81 E-value=0.34 Score=53.86 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=31.7
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+|+|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVE--LGKKVRMIERND 219 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH--TTCEEEEECCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCC
Confidence 34689999999999999999999 899999999864
No 305
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.72 E-value=0.41 Score=50.09 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||.|.+|.+.|..|++ .|++|+++|+..
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~--~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLK--QGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 3579999999999999999999 899999999864
No 306
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.54 E-value=0.37 Score=53.98 Aligned_cols=34 Identities=18% Similarity=0.484 Sum_probs=30.9
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+.+|.|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES--RGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 45579999999999999999999 89999999986
No 307
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.44 E-value=0.43 Score=50.72 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+|+|||||.+|.++|+.|+. .|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~--~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL--KELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCc
Confidence 4589999999999999999999 777 999999864
No 308
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.44 E-value=0.39 Score=48.79 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|||.+|..++.+|++ .|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAP--QGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGG--GTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHH--CCCEEEEEEcCh
Confidence 479999999999999999999 899999999864
No 309
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.40 E-value=0.45 Score=48.50 Aligned_cols=33 Identities=30% Similarity=0.383 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|+|.+|..++..|++ .|++|+++++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTA--QGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCc
Confidence 469999999999999999999 899999999864
No 310
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.38 E-value=0.4 Score=56.50 Aligned_cols=33 Identities=33% Similarity=0.407 Sum_probs=30.7
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|..+|..|++ .|++|+++|+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL--SNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT--TTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHh--CCCEEEEEECCH
Confidence 469999999999999999999 899999999864
No 311
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=85.35 E-value=0.44 Score=49.17 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|...|..|++ .|++|+++|+..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 479999999999999999999 899999999863
No 312
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.18 E-value=0.47 Score=50.02 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
...|.|||+|.+|.+.|..|++ .|+ +|+++|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCCCEEEEEECCH
Confidence 3579999999999999999999 898 999999864
No 313
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=85.06 E-value=0.26 Score=52.27 Aligned_cols=33 Identities=27% Similarity=0.200 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCC-------CcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPN-------CDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G-------~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .| ++|+++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~--~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG--NAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCcccCCCCeEEEEEcCh
Confidence 479999999999999999999 77 8999999864
No 314
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=85.00 E-value=0.33 Score=53.97 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~--~G~~Vtlv~~~~ 218 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST--LGSRLDVVEMMD 218 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECC
Confidence 3589999999999999999999 899999999863
No 315
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.94 E-value=0.34 Score=50.91 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=30.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~ 284 (728)
...|.|||.|.+|.+.|..|++ .|+ +|+++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~--~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQ--AGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--HSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCCeEEEEcCC
Confidence 4589999999999999999999 899 99999995
No 316
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=84.90 E-value=0.41 Score=52.93 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccC
Confidence 579999999999999999999 899999999864
No 317
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=84.83 E-value=0.42 Score=52.35 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIK--ANMHVTLLDTAA 182 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeCC
Confidence 3579999999999999999999 899999999853
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.82 E-value=0.45 Score=47.89 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
...|+|||||-+|...|..|.+ .|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG--GCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCC
Confidence 4579999999999999999999 89999999875
No 319
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.81 E-value=0.46 Score=49.79 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=29.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+..|.|||+|.+|.+.|..|+ . |++|+++|+..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCH
Confidence 457999999999999999999 3 89999999864
No 320
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.75 E-value=0.47 Score=46.26 Aligned_cols=31 Identities=32% Similarity=0.518 Sum_probs=29.0
Q ss_pred eEEEee-cceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 252 KVAILG-AGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 252 dVvVIG-AGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+|+||| +|.+|...|..|++ .|++|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~--~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT--LGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT--TTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 589999 99999999999999 89999999985
No 321
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.72 E-value=0.46 Score=46.46 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=30.3
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|| |.+|..++.+|++ .|++|++++|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN--RGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT--TTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHH--CCCEEEEEEcCc
Confidence 57999996 9999999999999 899999999974
No 322
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=84.72 E-value=0.46 Score=49.76 Aligned_cols=32 Identities=38% Similarity=0.533 Sum_probs=28.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|+|||+|.+|.+.|..|+ .|++|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~---~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS---LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH---TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh---cCCceEEEECCH
Confidence 47999999999999999998 378999999864
No 323
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=84.65 E-value=0.43 Score=52.62 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||||.+|+-.|..|++ .|.+|+|+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCC
Confidence 589999999999999999999 899999999863
No 324
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=84.56 E-value=0.4 Score=48.44 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=29.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCC----CcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPN----CDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G----~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .| ++|+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~--~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIAN--ANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--HTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCCCCCeEEEEeCCc
Confidence 479999999999999999999 77 7999999864
No 325
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=84.50 E-value=0.43 Score=53.26 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRSG 207 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECC
Confidence 4579999999999999999999 899999999864
No 326
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=84.48 E-value=0.49 Score=52.32 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+..|||.|.+|+.+|..|++ .|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~--~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAK--HGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 368899999999999999999 899999999864
No 327
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.45 E-value=0.51 Score=48.57 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.3
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+ |-+|.+.|..|++ .|++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD--SAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECCH
Confidence 47999999 9999999999999 899999999863
No 328
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.28 E-value=0.45 Score=50.02 Aligned_cols=33 Identities=15% Similarity=0.369 Sum_probs=29.4
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~ 199 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTT 199 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECC--
T ss_pred CEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCC
Confidence 479999999999999999999 899999999863
No 329
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.23 E-value=0.39 Score=50.69 Aligned_cols=32 Identities=31% Similarity=0.446 Sum_probs=29.3
Q ss_pred eEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
+|+|||+|-+|.+.|+.|++ .|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCCh
Confidence 69999999999999999999 788 999999863
No 330
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.23 E-value=0.54 Score=49.84 Aligned_cols=34 Identities=26% Similarity=0.261 Sum_probs=30.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+|+|||+|.+|.++|+.|+. .++ +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~--~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI--KQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCh
Confidence 3579999999999999999999 677 999999864
No 331
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.03 E-value=0.5 Score=53.19 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=31.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+...|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAAD--HGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 34579999999999999999999 899999999863
No 332
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=83.97 E-value=0.48 Score=55.75 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|..+|..|++ .|++|+++|+..
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSAS--KGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHH--TTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHh--CCCEEEEEECCH
Confidence 369999999999999999999 899999999864
No 333
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.78 E-value=0.36 Score=53.23 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtli~~~~ 210 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGR--IGSEVTVVEFAS 210 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCC
Confidence 3589999999999999999999 799999999864
No 334
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=83.76 E-value=0.5 Score=51.27 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtvv~~~~ 176 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARK--LGLSVTILEAGD 176 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCC
Confidence 4589999999999999999999 899999999863
No 335
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=83.75 E-value=0.4 Score=50.66 Aligned_cols=55 Identities=25% Similarity=0.488 Sum_probs=40.7
Q ss_pred eeecccCccchhhhhhhhhcccccccceeeccccccccccC--cceEEeecCceEEE
Q psy16975 636 HRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCN--DMHVIPVRGQTIRI 690 (728)
Q Consensus 636 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~nc~g~~~~~~~~--d~~~~~~~g~~~~v 690 (728)
..+..+|++|....+.++.+....+|.||||+|.++..|.. +..++|+|||.+.+
T Consensus 150 ~~~~~~G~~i~~~~v~~l~~~~~~a~~VV~A~G~~s~~l~~~~~~~~~p~rg~~~~~ 206 (363)
T 1c0p_A 150 RELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSIAGIDDQAAEPIRGQTVLV 206 (363)
T ss_dssp HHHHHTTCEEEECCCSBGGGTCSSCSEEEECCGGGGGTSBTTCCTTEEEEEEEEEEE
T ss_pred HHHHHCCCEEEEEEcccHhhcCcCCCEEEECCCcchhhccCcccCCccccCCeEEEE
Confidence 44556788876655555543211789999999999999875 78899999988743
No 336
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=83.72 E-value=0.44 Score=48.19 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=29.0
Q ss_pred eEEEeecceechhhHHHhhhhCCC-CcEEEeecc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPN-CDVTVIADK 284 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G-~~VtVIEk~ 284 (728)
.|.|||+|.+|.+.|..|++ .| ++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVK--QGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHH--CCCCeEEEECCC
Confidence 59999999999999999999 78 999999986
No 337
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=83.72 E-value=0.53 Score=48.04 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=29.4
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 59999999999999999999 899999999863
No 338
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=83.69 E-value=0.49 Score=52.18 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|||.|.+|+++|..|++ +|++|++.|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHT--TTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHh--CCCEEEEEECCC
Confidence 369999999999999999999 999999999864
No 339
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.60 E-value=0.65 Score=47.33 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=31.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeecccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~ 286 (728)
..+|+|||+|-+|..+|..|++ .|. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~--~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG--AGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH--TTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHH--cCCCeEEEEeCCCc
Confidence 4689999999999999999999 776 7999999864
No 340
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.58 E-value=0.54 Score=48.23 Aligned_cols=34 Identities=29% Similarity=0.340 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLAN--ICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHT--TSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeeCC
Confidence 4589999999999999999999 899999998753
No 341
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=83.45 E-value=0.52 Score=52.34 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||||.+|+-+|..|++ .|.+|+|+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGE 218 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCC
Confidence 479999999999999999999 899999999864
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.43 E-value=0.55 Score=51.90 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=29.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++|.|||+|.+|+++|..|++ |++|+++|++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCH
Confidence 3579999999999999999986 79999999864
No 343
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.36 E-value=0.63 Score=48.44 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.2
Q ss_pred ceEEEee-cceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILG-AGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIG-AGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.||| +|.+|.+.|..|++ .|++|+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~--~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA--SGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT--TTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHh--CCCeEEEEECCc
Confidence 3699999 99999999999999 899999999864
No 344
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.29 E-value=0.61 Score=46.96 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=30.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC----cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC----DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~----~VtVIEk~~ 285 (728)
..|.|||+|.+|.+.|..|++ .|+ +|+++|+..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN--KNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHh--CCCCCCCeEEEEeCCH
Confidence 469999999999999999999 888 999999863
No 345
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=83.21 E-value=0.57 Score=51.42 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAA--QGKNVTMIVRGE 181 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCC
Confidence 489999999999999999999 899999999864
No 346
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.19 E-value=0.57 Score=52.53 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|.|||.|.+|.+.|..|++ .|++|+++|+..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~--~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND--HGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 3579999999999999999999 899999999864
No 347
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.19 E-value=0.61 Score=48.01 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=29.5
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK--HGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH--TTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 59999999999999999999 899999999863
No 348
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=83.12 E-value=0.47 Score=49.70 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=29.2
Q ss_pred eEEEeecceechhhHHHhhhhCCC--CcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPN--CDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G--~~VtVIEk~~ 285 (728)
+|+|||+|-+|.+.|+.|++ .| .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~--~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIA--QGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCEEEEEcCCH
Confidence 69999999999999999999 67 7999999863
No 349
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=83.06 E-value=0.58 Score=51.39 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-.|..|++ .|.+|+|+++..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSN--QNYNVNLIDGHE 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSS
T ss_pred CCeEEEECcCHHHHHHHHHHHh--cCCEEEEEEcCC
Confidence 4579999999999999999999 899999999863
No 350
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.04 E-value=0.4 Score=51.54 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=30.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCC-------CcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPN-------CDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G-------~~VtVIEk~~ 285 (728)
..|.|||+|.+|.+.|..|++ .| ++|+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~--~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT--NAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH--HHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHH--cCCccCCCCCeEEEEECCh
Confidence 369999999999999999999 78 8999999864
No 351
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.01 E-value=0.55 Score=52.48 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 209 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR--LGIDSYIFARGN 209 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSS
T ss_pred CCeEEEECChHHHHHHHHHHHH--cCCeEEEEecCC
Confidence 3489999999999999999999 899999999853
No 352
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=83.01 E-value=0.55 Score=48.13 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+++++..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--hCCEEEEEEeCc
Confidence 3579999999999999999999 899999998763
No 353
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=82.92 E-value=0.49 Score=52.04 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||||.+|+-.|..|++ .|.+|+|+++..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE--RGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHh--cCCcceeeeeec
Confidence 3479999999999999999999 899999999863
No 354
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.76 E-value=0.61 Score=52.06 Aligned_cols=33 Identities=15% Similarity=0.383 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+|.|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~--~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES--RGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 3579999999999999999999 89999999985
No 355
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.75 E-value=0.61 Score=51.17 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||.|-+|..+|..|.+ .|++|+|||++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCH
Confidence 3479999999999999999999 899999999863
No 356
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=82.73 E-value=0.55 Score=55.43 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
-..|.|||||++|..+|+.++. .|++|+++|...
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~--aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHh--CCCchhcccchH
Confidence 3579999999999999999999 999999999864
No 357
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.60 E-value=0.59 Score=53.17 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=29.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+++|||||++|+=.|..+++ -|.+|||+++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~~ 255 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNS--LGYDVTVAVRS 255 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--HTCCEEEEESS
T ss_pred CceEEEECCCHHHHHHHHHHHh--cCCeEEEeccc
Confidence 3479999999999999999999 89999999764
No 358
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.57 E-value=0.67 Score=47.62 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..++|+|+|-+|.++|+.|++ .|.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~--~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLS--LDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHH--cCCEEEEEECCH
Confidence 479999999999999999999 889999998863
No 359
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.38 E-value=0.69 Score=45.68 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=31.0
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|.|| |.+|..+|.+|++ .|++|++++|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~--~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN--KGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHh--CCCeEEEEECCh
Confidence 457999998 9999999999999 899999999864
No 360
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=82.26 E-value=0.62 Score=52.10 Aligned_cols=31 Identities=26% Similarity=0.534 Sum_probs=29.5
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+|.|||+|.+|.+.|..|++ .|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~--~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE--KGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 69999999999999999999 89999999985
No 361
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.24 E-value=0.69 Score=44.99 Aligned_cols=32 Identities=31% Similarity=0.453 Sum_probs=29.6
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|+|| |.+|..+|.+|++ .|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR--RGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHH--CCCEEEEEEecc
Confidence 5999998 9999999999999 899999999864
No 362
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.23 E-value=0.69 Score=44.72 Aligned_cols=32 Identities=31% Similarity=0.408 Sum_probs=29.4
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|+|| |.+|..++.+|++ +|++|++++|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN--RGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHh--CCCEEEEEEcCc
Confidence 5999996 9999999999999 899999999863
No 363
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.22 E-value=0.8 Score=43.65 Aligned_cols=33 Identities=36% Similarity=0.542 Sum_probs=30.3
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+.|+|+|| |.+|..++.+|++ .|++|+++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~--~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ--AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH--TTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH--CCCeEEEEEeCh
Confidence 47999998 9999999999999 899999999864
No 364
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=82.19 E-value=0.61 Score=48.34 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~--~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHh--cCCeEEEEecCC
Confidence 4579999999999999999999 899999999864
No 365
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=82.12 E-value=0.63 Score=51.33 Aligned_cols=34 Identities=26% Similarity=0.479 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFAR--LGSKVTVLARNT 209 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECC
Confidence 3479999999999999999999 899999999853
No 366
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.04 E-value=0.61 Score=51.10 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=31.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++..++.+|+++++..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 458999999999999999999944489999998864
No 367
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.01 E-value=0.72 Score=47.67 Aligned_cols=34 Identities=12% Similarity=0.284 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC---cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC---DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~---~VtVIEk~~ 285 (728)
...|.|||+|-+|.+.|..|++ .|+ +|+++|+..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~--~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA--NGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH--TTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCCCCeEEEEeCCH
Confidence 3579999999999999999999 788 999999864
No 368
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.98 E-value=0.64 Score=51.99 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=30.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~--~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND--HGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 369999999999999999999 899999999853
No 369
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.95 E-value=0.59 Score=48.93 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=31.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
....|+|||+|-+|+.+|.+|++ .|. +++|+|.+.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~--aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTR--CGIGKLLLFDYDKVE 72 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBC-
T ss_pred hCCeEEEECcCHHHHHHHHHHHH--cCCCEEEEECCCccC
Confidence 35689999999999999999999 664 79999998754
No 370
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=81.90 E-value=0.65 Score=51.24 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 207 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAP 207 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCC
Confidence 3579999999999999999999 899999999863
No 371
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.89 E-value=0.55 Score=49.17 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=28.8
Q ss_pred eEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
+|+|||||-+|.++|+.|++ .++ +|+++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~--~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL--NLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECCh
Confidence 69999999999999999999 676 899999864
No 372
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.80 E-value=0.64 Score=53.13 Aligned_cols=32 Identities=31% Similarity=0.342 Sum_probs=29.7
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+|+|||||.+|+-+|..|++ .|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLAS--LGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC
Confidence 369999999999999999999 89999999875
No 373
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=81.60 E-value=0.77 Score=47.23 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..++|||+|-+|.++|+.|++ .|.+|+|++|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~--~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQ--AQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHH--TTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 479999999999999999999 789999999864
No 374
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.59 E-value=0.76 Score=49.15 Aligned_cols=33 Identities=33% Similarity=0.350 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||.|.+|.+.|..|.+ .|++|+++|+..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 469999999999999999999 899999999864
No 375
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=81.55 E-value=0.66 Score=47.66 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~--~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSN--IASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCC
Confidence 3579999999999999999999 899999998863
No 376
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=81.46 E-value=0.78 Score=50.79 Aligned_cols=34 Identities=6% Similarity=0.074 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEECC
Confidence 4579999999999999999999 899999999764
No 377
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=81.42 E-value=0.68 Score=47.90 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTK--FADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT--TCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeCCC
Confidence 3579999999999999999999 899999999853
No 378
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=81.37 E-value=0.85 Score=48.14 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=29.6
Q ss_pred ceEEEeecceechh-hHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLS-TALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLS-tA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|.|||.|.+|++ .|..|++ +|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCCC
Confidence 37999999999997 8888989 999999999864
No 379
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=81.37 E-value=0.76 Score=50.29 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|.+|+.+|..|.. -|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR--LGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCCH
Confidence 4589999999999999999998 899999999864
No 380
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=81.34 E-value=0.66 Score=50.61 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=28.2
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+|.|||+|.+|+.+|..|++ |++|+++|+..
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECCH
Confidence 69999999999999999997 68999999853
No 381
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=81.22 E-value=0.76 Score=47.98 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=27.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|.+||-|.+|...|..|++ .|++|+++|+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~--~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLE--AGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 469999999999999999999 999999999864
No 382
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=81.12 E-value=0.72 Score=52.33 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+|+++..
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRTP 211 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESSC
T ss_pred cceEEEECCCchHHHHHHHHHh--hCCEEEEEECCC
Confidence 4589999999999999999999 899999999864
No 383
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=81.12 E-value=0.81 Score=48.98 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=29.3
Q ss_pred CcceEEEeec-ceechhhHHHhhhhCCC--CcEEEeecc
Q psy16975 249 SNHKVAILGA-GIIGLSTALELQRRFPN--CDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGA-GIiGLStA~~La~~~~G--~~VtVIEk~ 284 (728)
...+|+|||+ |-+|.++|+.|+. .| .+|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~--~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAM--MRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHH--TTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHh--cCCCCEEEEEeCC
Confidence 3457999998 9999999999998 66 489999975
No 384
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=81.10 E-value=0.69 Score=48.78 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=29.5
Q ss_pred CcceEEEeec-ceechhhHHHhhhhCCCC-------cEEEeecc
Q psy16975 249 SNHKVAILGA-GIIGLSTALELQRRFPNC-------DVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGA-GIiGLStA~~La~~~~G~-------~VtVIEk~ 284 (728)
+.+.|+|+|| |.+|.+.++.|++ .|+ +|+++|..
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~--~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAA--GEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHT--TTTTCTTCCEEEEEECCG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHh--CCCCCCCCCCEEEEEeCC
Confidence 3457999997 9999999999998 775 89999975
No 385
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=80.90 E-value=0.85 Score=48.58 Aligned_cols=34 Identities=15% Similarity=0.485 Sum_probs=30.0
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC--cEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~ 284 (728)
...+|+|||+|-+|.++|+.|+. .|. +|+++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILM--KDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEeCC
Confidence 34589999999999999999999 676 89999975
No 386
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=80.89 E-value=0.76 Score=51.85 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH--LGIKTTLLELAD 184 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCcEEEEEcCC
Confidence 489999999999999999999 899999999853
No 387
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.85 E-value=0.75 Score=47.28 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=29.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|.+|.+.|..|++...+++|+++|+..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 357999999999999999999832268999998753
No 388
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=80.81 E-value=0.79 Score=49.63 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK--FGVNVTLLEALP 185 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEecCC
Confidence 4579999999999999999999 899999999864
No 389
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.80 E-value=0.79 Score=46.87 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=29.1
Q ss_pred eEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
.|.|||+|.+|.+.|..|++ .|+ +|+++|+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCCH
Confidence 69999999999999999999 788 899999863
No 390
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.78 E-value=0.86 Score=48.73 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=31.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
...|+|||+|-+|+.+|.+|+. .|. +++|+|.+...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~--aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEecCCEec
Confidence 5689999999999999999999 775 79999998754
No 391
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=80.66 E-value=0.71 Score=49.20 Aligned_cols=33 Identities=15% Similarity=0.431 Sum_probs=29.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~ 284 (728)
..+|+|||+|.+|.++|+.|+. .|+ +|+++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~--~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLM--KDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHH--HCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 4579999999999999999999 676 89999974
No 392
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=80.65 E-value=0.75 Score=51.73 Aligned_cols=32 Identities=31% Similarity=0.325 Sum_probs=29.5
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+++|||+|.+|+-.|..|++ .|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAG--IGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEecc
Confidence 369999999999999999999 89999999874
No 393
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=80.55 E-value=0.71 Score=47.84 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~--~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLD--TARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--hCCEEEEEEcCC
Confidence 3589999999999999999999 899999999863
No 394
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=80.54 E-value=0.76 Score=47.91 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~--~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR--FARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--TCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--hCCeEEEEEcCC
Confidence 4589999999999999999999 899999998753
No 395
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=80.51 E-value=0.73 Score=46.58 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=28.1
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeec
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk 283 (728)
.|.|||+|.+|.+.|..|++ .|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~--~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS--RGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH--TTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH--CCCeEEEeCC
Confidence 59999999999999999999 8999999877
No 396
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.37 E-value=0.7 Score=48.58 Aligned_cols=33 Identities=15% Similarity=0.410 Sum_probs=29.3
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
.+|+|||||-+|.++|+.|+. +|+ +|+++|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~--~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISA--KGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCCCEEEEEcCCc
Confidence 579999999999999999998 677 899999864
No 397
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.25 E-value=0.71 Score=50.13 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|.+|+.+|..|.. -|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR--LGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 4589999999999999999998 789999999864
No 398
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=80.12 E-value=0.84 Score=46.04 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=29.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++|.|||+|.+|.+.|..|++ .|++|+++|+..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~--~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ--TPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--SSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHh--CCCeEEEECCCH
Confidence 379999999999999999999 789999999863
No 399
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=80.08 E-value=0.67 Score=51.54 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||||.+|+-.|..|++ .|.+|+|+++..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWAR--LGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCEEEEEeccc
Confidence 3579999999999999999999 899999998764
No 400
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=80.04 E-value=0.83 Score=49.31 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~~ 175 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARA--KGLEVDVVELAP 175 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 4579999999999999999999 899999999863
No 401
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=80.03 E-value=0.82 Score=50.56 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=30.4
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+|+|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHD 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCC
Confidence 579999999999999999999 899999999853
No 402
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.99 E-value=0.61 Score=46.38 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=29.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...+|+|||+|-+|...|..|.+ .|+ |+++|++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~--~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG--SEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT--SEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHh--CCe-EEEEECCH
Confidence 34579999999999999999999 889 99999874
No 403
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=79.82 E-value=0.73 Score=48.71 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=28.4
Q ss_pred eEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
.|+|||+|.+|.++|+.|+. .++ +|+++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~--~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVAR--QDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCch
Confidence 69999999999999999998 565 899999854
No 404
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=79.81 E-value=0.83 Score=50.75 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=29.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+++|||+|.+|+-.|..|++ .|.+|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTG--IGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEcC
Confidence 469999999999999999999 89999999874
No 405
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=79.75 E-value=0.95 Score=47.29 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=29.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..|+|||+|.+|.++|+.|++ .|. +|+|++|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~--~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLS--TAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHH--CCCCEEEEEeCCH
Confidence 479999999999999999999 887 899999863
No 406
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=79.65 E-value=0.73 Score=51.47 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=30.1
Q ss_pred ceEEEeecceechhhHHHhhhhCC---CCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFP---NCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~---G~~VtVIEk~~ 285 (728)
.+++|||+|.+|+-.|..|++ . |.+|+|+++..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~--~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNA--YKPPGGKVTLCYRNN 227 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--HCCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--hCCCCCeEEEEEcCC
Confidence 489999999999999999999 6 99999999853
No 407
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=79.60 E-value=0.91 Score=49.86 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVK--MKKTVHVFESLE 180 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEEccC
Confidence 4579999999999999999999 899999999864
No 408
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=79.52 E-value=0.81 Score=46.94 Aligned_cols=30 Identities=30% Similarity=0.563 Sum_probs=28.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEee
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIA 282 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIE 282 (728)
+.|.|||+|.+|...|..|++ .|++|++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR--AGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH--TTCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh--CCCEEEEEc
Confidence 379999999999999999999 899999998
No 409
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.37 E-value=1.1 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=29.0
Q ss_pred eEEEeec-ceechhhHHHhh-hhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQ-RRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La-~~~~G~~VtVIEk~~ 285 (728)
.|+|+|| |-+|..+|.+|+ + .|++|++++|..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~--~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTY--TDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHH--CCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhc--CCceEEEEecCc
Confidence 4999996 999999999999 7 899999999863
No 410
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=79.08 E-value=0.92 Score=50.08 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-+|..|++ .|.+|+|+++..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCC
Confidence 3579999999999999999999 899999999864
No 411
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=79.07 E-value=0.85 Score=51.77 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+|+++..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~~ 218 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRTP 218 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESSC
T ss_pred CCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcCC
Confidence 4579999999999999999999 789999999864
No 412
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=79.07 E-value=0.87 Score=48.11 Aligned_cols=36 Identities=22% Similarity=0.455 Sum_probs=30.3
Q ss_pred ccCcceEEEeecceechhhHHHhhhhCCCC--cEEEeecc
Q psy16975 247 MGSNHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADK 284 (728)
Q Consensus 247 ~~~~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~ 284 (728)
|++..+|+|||||-+|.+.|+.|+. .+. +|.++|..
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~--~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQ--QGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHc--CCCCCEEEEEeCC
Confidence 3455789999999999999999998 444 79999975
No 413
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=79.04 E-value=0.84 Score=50.00 Aligned_cols=34 Identities=9% Similarity=-0.076 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCc-EEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCD-VTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~-VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|.+|++ .+.+ |+|+++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTP--VAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTT--TSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHH--HhCCcEEEEeCCC
Confidence 4579999999999999999999 7888 99999864
No 414
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.04 E-value=0.86 Score=46.98 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~--~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSE--YVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--hCCcEEEEEcCC
Confidence 3579999999999999999999 899999998753
No 415
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=79.03 E-value=0.92 Score=46.93 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=29.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..++|+|+|.+|.++|+.|++ .| +|+|+++..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~--~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAK--DN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTS--SS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHH--CC-CEEEEECCH
Confidence 469999999999999999999 89 999998863
No 416
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=79.02 E-value=0.79 Score=51.10 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCC---CCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFP---NCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~---G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-.|..|++ . |.+|+|+++..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~--~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNA--YKARGGQVDLAYRGD 223 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH--HSCTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--hccCcCeEEEEEcCC
Confidence 3589999999999999999998 6 99999999864
No 417
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=79.02 E-value=0.79 Score=46.45 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=29.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCc-EEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCD-VTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~-VtVIEk~~ 285 (728)
..|.|||+|-+|.+.|..|++ .|++ |+++|+..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYR--KGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHH--CCCeEEEEEeCCH
Confidence 479999999999999999999 7888 89998753
No 418
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=78.80 E-value=0.88 Score=48.34 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=29.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~ 284 (728)
...|+|||+|-+|.++|+.|+. .++ +|.++|..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVL--QGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCC
Confidence 3579999999999999999998 565 89999974
No 419
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=78.78 E-value=1 Score=46.46 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...++|||+|.+|.++|+.|++ .|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~--~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK--QGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 3479999999999999999999 789999998863
No 420
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=78.76 E-value=0.95 Score=46.64 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTK--YGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCC
Confidence 4579999999999999999999 899999999864
No 421
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.71 E-value=0.9 Score=47.85 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=29.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC--cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC--DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~--~VtVIEk~~ 285 (728)
...|+|||+|.+|.+.|+.|+. .+. +|+++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~--~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMN--QGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCCCEEEEEeCCc
Confidence 3589999999999999999988 443 799999863
No 422
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=78.51 E-value=1.2 Score=45.59 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=30.0
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|| |.+|..++.+|++ .|++|+++.|..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~--~g~~V~~l~R~~ 38 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLD--LGHPTFLLVRES 38 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHH--TTCCEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHh--CCCCEEEEECCc
Confidence 46999998 9999999999999 899999999864
No 423
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=78.38 E-value=1.1 Score=46.50 Aligned_cols=37 Identities=30% Similarity=0.469 Sum_probs=31.8
Q ss_pred ccCcceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 247 MGSNHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 247 ~~~~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
|++...|+|.|| |.+|..+|..|++ .|++|+++++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~--~G~~V~~~~r~~ 39 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLA--HGYDVVIADNLV 39 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHH--TTCEEEEECCCS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHH--CCCcEEEEecCC
Confidence 334557999996 9999999999999 899999999864
No 424
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=77.92 E-value=1.1 Score=49.47 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=30.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-.|..|++ .|.+|+++++..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 213 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMD 213 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCC
Confidence 3479999999999999999999 899999999854
No 425
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=77.87 E-value=1.3 Score=45.48 Aligned_cols=33 Identities=21% Similarity=0.178 Sum_probs=30.0
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|| |.+|..++.+|++ .|++|+++.|..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~ 38 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASIS--LGHPTYVLFRPE 38 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHH--TTCCEEEECCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHh--CCCcEEEEECCC
Confidence 46999997 9999999999999 899999999864
No 426
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=77.80 E-value=1.1 Score=48.01 Aligned_cols=33 Identities=27% Similarity=0.382 Sum_probs=30.0
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|+|.+|+.+|..|.. .|.+|+++|+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG--LGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 579999999999999999998 888999999863
No 427
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=77.79 E-value=1.1 Score=45.80 Aligned_cols=31 Identities=29% Similarity=0.468 Sum_probs=29.0
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+|+|.|| |.+|...+.+|.+ +|++|+++.|+
T Consensus 2 kILVTGatGfIG~~L~~~L~~--~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNA--RGHEVTLVSRK 33 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 6999998 9999999999999 89999999875
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.57 E-value=1.2 Score=47.76 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=30.2
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|||+|.+|+.+|..|+. .|.+|+++|+..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG--MGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCH
Confidence 579999999999999999999 899999999763
No 429
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=77.44 E-value=0.88 Score=51.72 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+|+++..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE--QAEQLFVFQRSA 224 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHh--hCCEEEEEECCC
Confidence 4589999999999999999999 789999999964
No 430
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=77.41 E-value=1 Score=47.42 Aligned_cols=34 Identities=26% Similarity=0.459 Sum_probs=29.2
Q ss_pred CcceEEEeecceechhhHHHhhhhCCC--CcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPN--CDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G--~~VtVIEk~ 284 (728)
...+|+|||||-+|.+.|+.|+. .+ .+|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~--~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVN--QSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 34689999999999999999998 55 489999865
No 431
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.40 E-value=1.1 Score=50.39 Aligned_cols=33 Identities=6% Similarity=0.096 Sum_probs=30.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||+|.+|+-.|..|++ .|.+|+|+++..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEecC
Confidence 579999999999999999999 899999999864
No 432
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=77.30 E-value=1 Score=47.36 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~--~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIK--NAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCC
Confidence 3579999999999999999999 899999999864
No 433
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=77.28 E-value=1.1 Score=47.55 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=29.0
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCC-------cEEEeecc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNC-------DVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~-------~VtVIEk~ 284 (728)
..+|+|||| |.+|.+.|+.|+. .++ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~--~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIAN--GDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHT--TTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHh--CCCcCCCCCCEEEEEcCC
Confidence 458999998 9999999999998 664 79999876
No 434
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=77.27 E-value=1.1 Score=49.50 Aligned_cols=32 Identities=34% Similarity=0.419 Sum_probs=29.6
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+++|||+|.+|+-+|..|++ .|.+|+|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCC
Confidence 479999999999999999999 89999999874
No 435
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=76.81 E-value=1 Score=46.34 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.8
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|||+|.+|.+.|+.|++ .|.+|+|+++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~--~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVK--EGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHH--cCCEEEEEECCH
Confidence 479999999999999999999 678999999863
No 436
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.75 E-value=1.9 Score=43.41 Aligned_cols=34 Identities=26% Similarity=0.196 Sum_probs=30.0
Q ss_pred cceEEEeec-c-eechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-G-IIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-G-IiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...++|.|| | -+|.++|.+|++ .|++|+++++..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~--~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALL--EGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHH--CCCEEEEecCCH
Confidence 456999999 8 699999999999 899999999864
No 437
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=78.46 E-value=0.5 Score=46.44 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=29.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|-+|.+.|..|++ .|++|+++++..
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~--~G~~V~~~~r~~ 52 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQ--CGYSVVFGSRNP 52 (201)
Confidence 469999999999999999999 899999998864
No 438
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.70 E-value=1.3 Score=44.60 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=29.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .| +|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~--~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD--WG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG--TS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhh--cC-cEEEEECCC
Confidence 4589999999999999999999 78 999998754
No 439
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=76.60 E-value=1.4 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.8
Q ss_pred cceEEEeecc-eechhhHHHhhhhCCCCcEEEeecc
Q psy16975 250 NHKVAILGAG-IIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAG-IiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..+++|||+| ++|..+|..|+. .|.+|+|+++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~--~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAN--DGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHT--TSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHH--CCCEEEEEeCc
Confidence 4589999999 779999999999 88999999886
No 440
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=76.52 E-value=1.4 Score=46.35 Aligned_cols=32 Identities=38% Similarity=0.454 Sum_probs=28.9
Q ss_pred eEEEeec-ceechhhHHHhhhhCCC--CcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPN--CDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G--~~VtVIEk~~ 285 (728)
+|+|||| |-+|.++|+.|++ .+ .+|+++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~--~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN--SPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT--CTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHh--CCCCcEEEEEeCCc
Confidence 6999998 9999999999998 67 6899999864
No 441
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=76.46 E-value=1.2 Score=46.30 Aligned_cols=34 Identities=29% Similarity=0.262 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
...++|||+|.+|.++|+.|++ .|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYK--IVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHT--TCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEeCCH
Confidence 3479999999999999999999 898 899999874
No 442
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=76.42 E-value=1.3 Score=47.10 Aligned_cols=33 Identities=39% Similarity=0.404 Sum_probs=29.9
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|.|||+|.+|.+.|..|++ .|++|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~--~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKD--SGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHH--CcCEEEEEECCh
Confidence 469999999999999999999 899999998863
No 443
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=76.30 E-value=1.2 Score=50.65 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~ 220 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRE--RGIEVTLVEMAN 220 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCC
Confidence 3579999999999999999999 899999998853
No 444
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.29 E-value=1.2 Score=47.82 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=31.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
..+|+|||+|-+|+.+|.+|++ .|. +++|+|.+...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~--aGvg~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILAT--SGIGEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCCeEEEECCCcCc
Confidence 5689999999999999999999 675 79999998643
No 445
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=76.22 E-value=1.2 Score=48.46 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=30.6
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~ 284 (728)
....|+|+|||.+|..+|..|.. .|. +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~--~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLD--LGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 45689999999999999999999 677 79999996
No 446
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.00 E-value=1.4 Score=45.20 Aligned_cols=35 Identities=34% Similarity=0.431 Sum_probs=31.4
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeecccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKFN 286 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~~ 286 (728)
...|+|.|| |.+|..++.+|++ .|++|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVA--SGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--TTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHH--CCCEEEEEecCCc
Confidence 457999999 9999999999999 8999999998653
No 447
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=75.96 E-value=1.2 Score=49.57 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=30.4
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+++|||+|.+|+-.|..|++ .|.+|+|+++..
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQD 215 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCC
Confidence 479999999999999999999 899999999864
No 448
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.91 E-value=1.4 Score=50.51 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=31.9
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
..+|+|||+|-+|+.+|..|++ .|. +++|+|.+.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~--aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCccc
Confidence 4689999999999999999999 776 79999988653
No 449
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=75.89 E-value=1.2 Score=48.44 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=31.3
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
....|||+|||.+|..+|..|.. .|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~--~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLA--AGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHH--cCCCeEEEEECCC
Confidence 45689999999999999999998 688 999999973
No 450
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=75.84 E-value=1.2 Score=47.68 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=32.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
..+|+|||+|-+|+.+|..|+. .|. +++|+|.+.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~--~Gvg~itlvD~d~V~ 72 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLIL--AGVKGLTMLDHEQVT 72 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEECCCcc
Confidence 5689999999999999999999 777 79999988643
No 451
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=75.80 E-value=1.4 Score=48.06 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.3
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|.+|+.+|..|.. .|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCH
Confidence 3579999999999999999988 789999999864
No 452
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=75.32 E-value=1.7 Score=45.11 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
...++|||+|-+|.++|+.|++ .|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~--~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKD--NFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHH--TTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHH--cCCCEEEEEeCCH
Confidence 4579999999999999999999 887 899999864
No 453
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=75.31 E-value=1.5 Score=50.40 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=31.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
...|+|||+|-+|+.+|..|+. .|. +++|+|.+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~--aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCCCc
Confidence 4579999999999999999999 775 79999998653
No 454
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=75.31 E-value=1.5 Score=48.72 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=31.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|-+|...|..|.+ .|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~--~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE--AGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CcCEEEEEcCCC
Confidence 3579999999999999999999 899999999864
No 455
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=75.31 E-value=1.7 Score=44.89 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.1
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|| |.+|..++.+|++ .|++|+++.|..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~--~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLK--LGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHH--TTCCEEEEECTT
T ss_pred CeEEEECCCchHHHHHHHHHHH--CCCcEEEEECCC
Confidence 36999997 9999999999999 899999999864
No 456
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.02 E-value=1.5 Score=44.59 Aligned_cols=34 Identities=32% Similarity=0.398 Sum_probs=30.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+++++..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~--~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLAN--ICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHT--TSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCC
Confidence 4579999999999999999999 899999998763
No 457
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=74.99 E-value=1.6 Score=48.11 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=32.5
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCC-cEEEeeccccc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKFNM 287 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~~g 287 (728)
...+|+|||+|-+|+.+|..|+. .|. +++|+|.+.+.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~--aGvg~i~ivD~D~Ve 76 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLAL--SGFRQIHVIDMDTID 76 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHH--TTCCCEEEEECCBCC
T ss_pred cCCEEEEECcCHHHHHHHHHHHH--cCCCEEEEEcCCEec
Confidence 35689999999999999999999 776 79999998654
No 458
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=74.93 E-value=1.5 Score=44.77 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=29.6
Q ss_pred eEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
.++|||+|-+|.++|+.|++ .|. +|+|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~--~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ--MGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHH--cCCCEEEEEeCCH
Confidence 79999999999999999999 887 899999864
No 459
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=74.86 E-value=1.7 Score=46.00 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=29.8
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~ 284 (728)
...++|+|+|-+|.++|+.|++ .|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~--~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAAL--DGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHH--CCCCEEEEEECC
Confidence 3479999999999999999999 898 89999886
No 460
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.79 E-value=1.5 Score=46.97 Aligned_cols=33 Identities=39% Similarity=0.475 Sum_probs=27.8
Q ss_pred CcceEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 249 ~~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
.+++|+|||||.+|..+|..|++ .++|+|.++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~ 47 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD---EFDVYIGDVN 47 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT---TSEEEEEESC
T ss_pred CccEEEEECCCHHHHHHHHHHhc---CCCeEEEEcC
Confidence 34579999999999999999987 4689998875
No 461
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=74.78 E-value=1.6 Score=45.29 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=30.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
...++|+|+|-+|.++|+.|++ .|. +|+|++|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~--~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVT--HGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEECCH
Confidence 3479999999999999999999 888 699998863
No 462
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=74.73 E-value=1.3 Score=46.25 Aligned_cols=36 Identities=25% Similarity=0.138 Sum_probs=31.8
Q ss_pred cCcceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 248 GSNHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 248 ~~~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
++...|+|.|| |.+|..++.+|++ .|++|+++++..
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 59 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK--LNQVVIGLDNFS 59 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 34568999996 9999999999999 899999999864
No 463
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=74.61 E-value=1.7 Score=48.05 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.1
Q ss_pred ceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|+|+|.+|..+|..|++ .|++|+|+++..
T Consensus 4 k~VlViGaG~iG~~ia~~L~~--~G~~V~v~~R~~ 36 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTD--SGIKVTVACRTL 36 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHT--TTCEEEEEESSH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CcCEEEEEECCH
Confidence 469999999999999999998 889999999864
No 464
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=74.28 E-value=1.5 Score=44.50 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=29.3
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.++|||+|-+|.+.|..|.+ .|.+|+|+++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~--~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALRE--AGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHH--TTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 79999999999999999999 788999998863
No 465
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=74.25 E-value=1.8 Score=44.93 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=30.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
...++|||+|-+|.++|+.|++ .|. +|+|++|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD--QQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHh--cCCCeEEEEECCH
Confidence 4579999999999999999999 895 899998863
No 466
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=74.13 E-value=1.7 Score=46.84 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|.+|+.+|..|.. .|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANG--MGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 3579999999999999999998 899999999853
No 467
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=74.07 E-value=1.6 Score=46.14 Aligned_cols=34 Identities=32% Similarity=0.310 Sum_probs=29.4
Q ss_pred cceEEEee-cceechhhHHHhhhhCCC--CcEEEeeccc
Q psy16975 250 NHKVAILG-AGIIGLSTALELQRRFPN--CDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIG-AGIiGLStA~~La~~~~G--~~VtVIEk~~ 285 (728)
.++|+||| +|.+|.+.|+.|++ .| .+|+++|...
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~--~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKM--NPLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHH--CTTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHh--CCCCCEEEEEeCCC
Confidence 35799999 79999999999998 67 7899999653
No 468
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=73.73 E-value=1.6 Score=44.87 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=28.1
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|.|| |.+|..++.+|++ .|++|+++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 36 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQ--NNWHAVGCGFRR 36 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT--TTCEEEEEC---
T ss_pred CeEEEECCCcHHHHHHHHHHHh--CCCeEEEEccCC
Confidence 36999998 9999999999999 899999999753
No 469
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=73.62 E-value=1.7 Score=46.92 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|||+|.+|+.+|..|.. .|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR--LGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 4579999999999999999988 789999999763
No 470
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=73.56 E-value=1.3 Score=48.80 Aligned_cols=33 Identities=36% Similarity=0.504 Sum_probs=30.4
Q ss_pred cceEEEeecceechhhHHHhhhhCC-CCcEEEeecc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFP-NCDVTVIADK 284 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~-G~~VtVIEk~ 284 (728)
..+++|||+|.+|+-+|..|++ . |.+|+++++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~--~~g~~Vtlv~~~ 192 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLAD--MWGIDTTVVELA 192 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--HHCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--hcCCcEEEEEcc
Confidence 3589999999999999999999 7 9999999985
No 471
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=73.42 E-value=1.8 Score=44.61 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=30.1
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
...++|+|+|-+|.++|+.|++ .|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~--~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ--AGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHH--cCCCEEEEEeCCH
Confidence 4579999999999999999999 885 899998863
No 472
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=73.30 E-value=1.4 Score=44.95 Aligned_cols=34 Identities=29% Similarity=0.288 Sum_probs=30.7
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~--~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSS--YSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--hCCeEEEEEeCC
Confidence 4589999999999999999999 789999998863
No 473
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=72.89 E-value=1.6 Score=45.15 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=29.2
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~--~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVST--VA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHh--hC-CEEEEECCC
Confidence 4589999999999999999999 67 699998763
No 474
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=72.79 E-value=1.3 Score=49.78 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .|.+|+++++..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~--~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAP 388 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--HBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCc
Confidence 4589999999999999999999 789999998753
No 475
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=72.74 E-value=1.8 Score=48.01 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=29.2
Q ss_pred cceEEEeecceechhhHHHhhhh------------------CCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRR------------------FPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~------------------~~G~-~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++. ..|. +|+|+++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 35799999999999999999930 0566 699998864
No 476
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=72.70 E-value=1.8 Score=44.82 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=30.1
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..|+|.|| |.+|..+|.+|++ .|++|+++++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~--~G~~V~~~~r~~ 37 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLE--KGYEVYGADRRS 37 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--TTCEEEEECSCC
T ss_pred CEEEEECCCChHHHHHHHHHHH--CCCEEEEEECCC
Confidence 46999998 9999999999999 899999999864
No 477
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=72.65 E-value=2 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|-+|..+|..|.. .|.+|+++|+..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAA--LGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 3479999999999999999998 899999999863
No 478
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.65 E-value=1.8 Score=45.26 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=30.5
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|+|| |.+|..++.+|++ .|++|+++.|..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~--~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLD--AHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHH--CCCCEEEEECCC
Confidence 357999999 9999999999999 899999999964
No 479
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=72.65 E-value=2 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.6
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|+|| |.+|..++.+|++ .|++|+++.|..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~ 38 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLS--FSHPTFIYARPL 38 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHH--TTCCEEEEECCC
T ss_pred EEEEEcCCchhHHHHHHHHHh--CCCcEEEEECCc
Confidence 5999997 9999999999999 899999999864
No 480
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=72.54 E-value=2.1 Score=44.13 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=30.6
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|.|| |.+|..++.+|++ .|++|+++++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 45 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLE--HGYKVRGTARSA 45 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESSH
T ss_pred CCEEEEECCccHHHHHHHHHHHH--CCCEEEEEeCCc
Confidence 457999998 9999999999999 899999999863
No 481
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=72.33 E-value=1.9 Score=44.22 Aligned_cols=32 Identities=16% Similarity=0.346 Sum_probs=29.7
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
..|+|.|| |.+|..++..|++ .|++|+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN--DGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 47999995 9999999999999 89999999997
No 482
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=72.19 E-value=2 Score=43.30 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=29.3
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|.|| |-+|.++|.+|++ .|++|+++++..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~--~G~~V~~~~r~~ 63 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGS--LGARVVLTARDV 63 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CCEEEEECCCChHHHHHHHHHHH--CCCEEEEEECCH
Confidence 346888886 8899999999999 899999999864
No 483
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=71.89 E-value=1.4 Score=44.58 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=29.0
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeec
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIAD 283 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk 283 (728)
+.|+|+|| |.+|..++.+|++ .|++|+++++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP--EEYDIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT--TTEEEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHh--CCCEEEEecc
Confidence 37999997 9999999999999 8999999998
No 484
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=71.68 E-value=1.7 Score=44.51 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=30.6
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+|+|||+|.+|+-+|..|++ .+.+|+++++..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~--~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP--IAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--TBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHh--hCCeEEEEEecC
Confidence 4579999999999999999999 789999998863
No 485
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=71.60 E-value=2.1 Score=43.65 Aligned_cols=31 Identities=35% Similarity=0.489 Sum_probs=27.8
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|.|||+|.+|...|..|++ |++|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT---TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC---CCeEEEEeCCH
Confidence 59999999999999999987 68999999853
No 486
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=71.48 E-value=1.9 Score=47.40 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-.|..|++ .|.+|+++++..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~~ 203 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHG--LGVKTTLIYRGK 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCC
Confidence 4579999999999999999999 899999999864
No 487
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=71.36 E-value=1.9 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=31.0
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..+++|||+|.+|+-.|..|++ .|.+|+++++..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECCC
Confidence 4589999999999999999999 899999999864
No 488
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=71.36 E-value=2.1 Score=41.63 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=29.4
Q ss_pred eEEEee-cceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILG-AGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIG-AGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|+| +|.+|..++.+|++ .|++|++++|..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~--~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST--TDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT--SSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHH--CCCEEEEEECCc
Confidence 599999 59999999999999 899999999864
No 489
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=71.27 E-value=1.8 Score=44.18 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=30.3
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCC-CcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPN-CDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G-~~VtVIEk~~ 285 (728)
...|+|.|| |.+|..++.+|++ .| ++|+++.|..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~--~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLE--DGTFKVRVVTRNP 40 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--HCSSEEEEEESCT
T ss_pred CCEEEEECCCchHHHHHHHHHHh--cCCceEEEEEcCC
Confidence 457999998 9999999999999 67 9999999864
No 490
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.22 E-value=2 Score=47.53 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=29.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
..+|+|||||.+|+-+|..|.+ .|. +|+++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r--~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIR--QGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHH--cCCCEEEEEEeCC
Confidence 4589999999999999999999 777 599998753
No 491
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=71.14 E-value=1.6 Score=45.83 Aligned_cols=32 Identities=38% Similarity=0.540 Sum_probs=27.8
Q ss_pred eEEEeecceechhhHHHhhhhCCCC-cEEEeeccc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNC-DVTVIADKF 285 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~-~VtVIEk~~ 285 (728)
+|+|||||-+|.++|+.|+. .++ +|.++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~--~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM--RGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH--HTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHh--CCCCEEEEEcCCh
Confidence 48999999999999999998 566 699999863
No 492
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=71.07 E-value=2 Score=43.94 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=29.5
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|.|| |.+|..++.+|++ .|++|+++++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 34 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE--LGYEVVVVDNLS 34 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEECCCS
T ss_pred EEEEECCCChHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 5899999 9999999999999 899999999864
No 493
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=71.02 E-value=2.3 Score=44.21 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=30.5
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.+.|+|.|| |.+|..+|.+|++ .|++|+++++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~--~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLP--QGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGG--GTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEECCC
Confidence 347999998 9999999999999 899999999854
No 494
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=70.85 E-value=2 Score=42.47 Aligned_cols=34 Identities=29% Similarity=0.293 Sum_probs=30.1
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCC-CcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPN-CDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G-~~VtVIEk~~ 285 (728)
...|+|.|| |.+|..+|..|++ .| ++|++++|..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~--~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLAD--KQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT--CTTEEEEEEESSG
T ss_pred ccEEEEEeCCcHHHHHHHHHHHh--CCCceEEEEEcCh
Confidence 347999995 9999999999999 88 8999999864
No 495
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=70.73 E-value=2.3 Score=43.99 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.0
Q ss_pred ceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
+.|+|.|| |.+|..++.+|++ .|++|+++++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 47 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA--AGHDLVLIHRPS 47 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH--TTCEEEEEECTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH--CCCEEEEEecCh
Confidence 37999996 9999999999999 899999999864
No 496
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=70.57 E-value=2.4 Score=43.87 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=30.5
Q ss_pred cceEEEeecceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|.|||+|-+|..+|..|.. .|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA--LGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECCH
Confidence 3479999999999999999998 789999999863
No 497
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=70.41 E-value=2.3 Score=44.48 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=27.0
Q ss_pred eEEEeecceechhhHHHhhhhCCCCcEEEeecc
Q psy16975 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284 (728)
Q Consensus 252 dVvVIGAGIiGLStA~~La~~~~G~~VtVIEk~ 284 (728)
+|+|||||-+|.++||.|+.+.---++.++|..
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 699999999999999999873222379999974
No 498
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=70.39 E-value=2.4 Score=43.68 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=29.8
Q ss_pred ceEEEee-cceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 251 HKVAILG-AGIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 251 ~dVvVIG-AGIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
..++|+| +|-+|.++|+.|++ .|.+|++++|..
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~--~G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAG--EGAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHH--CcCEEEEEECCH
Confidence 4699999 89999999999999 899999998863
No 499
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=70.39 E-value=2.1 Score=44.60 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=30.1
Q ss_pred cceEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 250 NHKVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 250 ~~dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
...|+|.|| |.+|..++..|++ .|++|+++++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~--~G~~V~~~~r~~ 53 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRT--QGRTVRGFDLRP 53 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHH--TTCCEEEEESSC
T ss_pred CCEEEEECCCChHHHHHHHHHHh--CCCEEEEEeCCC
Confidence 457999998 9999999999999 899999999875
No 500
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=70.37 E-value=2.1 Score=42.19 Aligned_cols=32 Identities=28% Similarity=0.214 Sum_probs=29.2
Q ss_pred eEEEeec-ceechhhHHHhhhhCCCCcEEEeeccc
Q psy16975 252 KVAILGA-GIIGLSTALELQRRFPNCDVTVIADKF 285 (728)
Q Consensus 252 dVvVIGA-GIiGLStA~~La~~~~G~~VtVIEk~~ 285 (728)
.|+|.|| |.+|..+|.+|++ .|++|+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~--~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR--AGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHh--CCCEEEEEeCCh
Confidence 5899997 9999999999999 899999999864
Done!