RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16975
(728 letters)
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 82.6 bits (203), Expect = 3e-18
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 634 FVHRFKAAGGKVIEKYISSFSELGSE-YNTIFNCTGLGARTLCNDMHVIPVRGQTIR--- 689
R G K + + SF E+ + I NCTG+ A L D + + + +R
Sbjct: 148 LTERLTERGVKFFLRKVESFEEVARGGADVIINCTGVWAGVLQPDPLQVRLEREQLRFGS 207
Query: 690 ----IVHNYGHGGYGVTSAPGSARCAVSVFEQ 717
++HNYGHGGYG+T G A +F +
Sbjct: 208 SNTEVIHNYGHGGYGLTIHWGCALEVAKLFGK 239
Score = 76.8 bits (188), Expect = 3e-16
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 252 KVAILGAGIIGLSTALELQRRFPN----CDVTVIADKFNMDTTSDGAAGLFEP--SPNFM 305
+V ++GAG+IGLSTAL + R+ + DV V AD+F TT+D AAGL++P S
Sbjct: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSN 61
Query: 306 GPDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMS 365
+ ++ Y H + N G+ ++GYNL + Y K ++ +++++
Sbjct: 62 PQEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPD---PYWKDMVLGFRKLT 118
Query: 366 EEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQK 400
EL D++YG + ++L++ R +L W ++
Sbjct: 119 PRELDM--FPDYRYGWFNTSLILEGRKYLQWLTER 151
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 75.1 bits (183), Expect = 2e-15
Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 9/156 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMG 306
M S +V +LG+G+IGLS+AL L R+ V ++A D +S A + +
Sbjct: 3 MHSQKRVVVLGSGVIGLSSALILARK--GYSVHILARDLPEDVSSQTFASPWAGANWTPF 60
Query: 307 PDLETTKEWIRYSYDHYAGL--LSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRM 364
L ++ + L + G + H+ K + P Y+ +
Sbjct: 61 MTLTDGPRQAKWEESTFKKWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPL 120
Query: 365 SEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQK 400
E G+ TL + + + ++
Sbjct: 121 PSSECPP-----GAIGVTYDTLSVHAPKYCQYLARE 151
Score = 64.3 bits (155), Expect = 8e-12
Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 30/117 (25%)
Query: 634 FVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTL--CNDMHVIPVRGQTIR-- 689
+ G + ++S + + + N TGLGA+++ +D R + R
Sbjct: 148 LARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSIAGIDDQARGGPRVEAERIV 207
Query: 690 --------------------------IVHNYGHGGYGVTSAPGSARCAVSVFEQSHK 720
+VH YG G + G+A + +++ +
Sbjct: 208 LPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEAFQ 264
>d1ryia2 d.16.1.3 (A:219-306) Glycine oxidase ThiO {Bacillus sp.
[TaxId: 1409]}
Length = 88
Score = 51.9 bits (124), Expect = 4e-09
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 533 FASLVRLAGAYIIPSYGGLVTLGGTQDYGNARLGVDRFDSRAILNRTAAVRPEILAAPVE 592
+ YI+P G + +G T G+ D +++ + + P I V+
Sbjct: 18 LTKTLYHDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVD 77
Query: 593 KVWVGLRPY 601
+ W GLRP
Sbjct: 78 RFWAGLRPG 86
>d1c0pa2 d.16.1.3 (A:1194-1288) D-aminoacid oxidase {Rhodotorula
gracilis [TaxId: 5286]}
Length = 95
Score = 48.6 bits (115), Expect = 8e-08
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 543 YIIPSYGGLVTLGGTQDYGNARLGVDRFDSRAILNRTAAVRPEIL------AAPVEKVWV 596
YIIP GG V GGT G+ L V+ + IL + P I V + V
Sbjct: 30 YIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNV 89
Query: 597 GLRPYR 602
GLRP R
Sbjct: 90 GLRPAR 95
>d1kifa2 d.16.1.3 (A:195-287) D-aminoacid oxidase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 93
Score = 47.4 bits (112), Expect = 2e-07
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 541 GAYIIPSYGGLVTLGGTQDYGNARLGVDRFDSRAILNRTAAVRPEILAAPVEKVWVGLRP 600
YIIP + LGGT GN + D I + P + A + + G RP
Sbjct: 32 SPYIIPGLQAVT-LGGTFQVGNWNEINNIQDHNTIWEGCCRLEPTLKDAKIVGEYTGFRP 90
Query: 601 YR 602
R
Sbjct: 91 VR 92
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 45.9 bits (107), Expect = 8e-06
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMG 306
M +++ ++G GIIG + A L + N + + T+ AAG+ +
Sbjct: 1 MKRHYEAVVIGGGIIGSAIAYYLAKE--NKNTALFESGTMGGRTTSAAAGML--GAHAEC 56
Query: 307 PDLETTKEWIRYSYDHY 323
+ + ++ +S Y
Sbjct: 57 EERDAFFDFAMHSQRLY 73
Score = 27.0 bits (58), Expect = 7.6
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Query: 659 EYNTIFNCTG-----LGARTLCNDMHVIPVRGQTI---RIVHNYGHGGYGVTSAPGSAR 709
N + +G + N+ P G+ RI+ GH G+ AP +
Sbjct: 194 WANHVVVASGVWSGMFFKQLGLNNADGKPYIGRHPEDSRILFAAGHFRNGILLAPATGA 252
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB
{Staphylococcus aureus [TaxId: 1280]}
Length = 312
Score = 45.4 bits (106), Expect = 2e-05
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 5 HHFGVWLIEEFLIGLASGSHIKVPGVEMIPVEAFRLVPHSSGSYIVVDGEVLDYGPIQAE 64
+ + + + G H K P V +A + + + VDGE P
Sbjct: 225 EKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFT-DLQLNVDGEYGGKLPANFL 283
Query: 65 IFPGLIE 71
I+
Sbjct: 284 NLERHID 290
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 44.4 bits (103), Expect = 3e-05
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 8/156 (5%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDT---TSDGAAGL---FEPSPNFM 305
++ I+GAGI+G + A EL R N ++TV+ D+ ++ ++ A GL PS
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWN-NITVL-DQGPLNMPGGSTSHAPGLVFQTNPSKTMA 60
Query: 306 GPDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMS 365
T ++ + + D + LA +++ +
Sbjct: 61 SFAKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAE 120
Query: 366 EEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKD 401
+EL + G+ G +
Sbjct: 121 CQELYPLLDGENILGGLHVPSDGLASAARAVQLLIK 156
Score = 34.3 bits (77), Expect = 0.046
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 508 WKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLVTLGGTQDYGNARLGV 567
G+ + P A V + + + + G + +
Sbjct: 209 AMIGMAVPPDGGPLLGESKELDGFYVAEAVWVTHSAGVAKAMAELLTTGRSETDLGECDI 268
Query: 568 DRFDSRAILNRTAAVRPEILAAPVEKVWVGLRPY 601
RF+ + T E +++ L P
Sbjct: 269 TRFE---DVQLTPEYVSETSQQNFVEIYDVLHPL 299
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 43.6 bits (101), Expect = 4e-05
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPD 308
+ ++A++G I GL+ AL L+ DV V ++ + G + +P +
Sbjct: 3 TTDRIAVVGGSISGLTAALMLRDA--GVDVDVY-ERSPQPLSGFGTGIVVQPELVHYLLE 59
Query: 309 LETTKEWIRYSYDHYAGLLSENCGV 333
+ I + +
Sbjct: 60 QGVELDSISVPSSSMEYVDALTGER 84
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 43.9 bits (102), Expect = 4e-05
Identities = 19/181 (10%), Positives = 51/181 (28%), Gaps = 15/181 (8%)
Query: 249 SNH-KVAILGAGIIGLSTALELQRRFPNCDVTVI--ADKFNMDTTSDGAAGLFEPS---- 301
S H V ++GAG +G++ +L ++ ++ D + + + G + +
Sbjct: 1 STHFDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEG 58
Query: 302 ------PNFMGPDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLK 355
++ + G+L + ++ K+ + L
Sbjct: 59 REYVPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLL 118
Query: 356 PVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGERPSTLSV 415
+ KR + E ++ + R + + R +
Sbjct: 119 EGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDI 178
Query: 416 E 416
Sbjct: 179 S 179
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 43.6 bits (101), Expect = 6e-05
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 6/57 (10%)
Query: 225 QNGDKKGLFFIPTQSCPANPKVMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
Q D + I A V I+GAG+ GLS A L VTV+
Sbjct: 9 QENDYEEFLEIARNGLKATSN----PKHVVIVGAGMAGLSAAYVLAGA--GHQVTVL 59
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 43.0 bits (100), Expect = 8e-05
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPS 301
+VAI+GAG GL L + D ++ + AG+ E
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTPDYVLGRIRAGVLEQG 51
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 42.8 bits (99), Expect = 1e-04
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
VA++G GI GL+ A L+ R D ++
Sbjct: 2 NVAVVGGGISGLAVAHHLRSR--GTDAVLL 29
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 40.5 bits (93), Expect = 2e-04
Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 17/102 (16%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 311
KV ++G G G + A ++ P+ +VT+I EP+ ++ L
Sbjct: 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLI-----------------EPNTDYYTCYLSN 46
Query: 312 TKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHY 353
+ + ++ A +
Sbjct: 47 EVIGGDRKLESIKHGYDGLRAHGIQVVHDSATGIDPDKKLVK 88
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 40.2 bits (92), Expect = 4e-04
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
KV +LG+ G EL P+ ++
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWY 31
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 40.2 bits (92), Expect = 6e-04
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 23/223 (10%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI--------------ADKFNMDTTSDGAAGL 297
+VA++GAG+ GL+ A +L+ +VTV D D GA +
Sbjct: 3 RVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKAGGKLRSVSQDGLIWDE---GANTM 57
Query: 298 FEPSPNFMG----PDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHY 353
E + L +++ Y + + +
Sbjct: 58 TESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQ 117
Query: 354 LKPVLPVYKRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGERPSTL 413
+ ++K ++++ + + + + P+ G
Sbjct: 118 MLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHS 177
Query: 414 SVELYHYNRDSLTVVRGPLHEKVSSGPRTCAMQRAMQHDHYAG 456
EL++ + +V+ G + K+S +
Sbjct: 178 FPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQ 220
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 40.0 bits (92), Expect = 7e-04
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAG 296
+AI+GAG GL A+ + PN + +I+ + M + + A G
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEG 51
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 40.0 bits (92), Expect = 7e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ + K+AI+GAG GL TA L VT+
Sbjct: 1 LPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLF 35
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 39.9 bits (91), Expect = 9e-04
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
KV I+G+G+ GL+ A +LQ DVT++
Sbjct: 5 TGKVIIIGSGVSGLAAARQLQSF--GMDVTLL 34
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 39.7 bits (91), Expect = 0.001
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI--ADKF--NMDTTSDGAAGLFEPSPNFMGPD 308
V ++G GI G++ A L +V V+ D+ T + + +++GP
Sbjct: 2 VVVVGGGISGMAAAKLLHDS--GLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT 59
Query: 309 LETTKEWIR 317
+
Sbjct: 60 QNRILRLAK 68
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 39.4 bits (91), Expect = 0.001
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ K+ I+GAG G +L + V +I
Sbjct: 2 SKKILIVGAGFSGAVIGRQLAEK--GHQVHII 31
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 38.0 bits (87), Expect = 0.002
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
++ ++G+G G TA L + V +
Sbjct: 3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIY 32
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 37.6 bits (85), Expect = 0.004
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+V ++GAG+ G+S A L D+ ++
Sbjct: 2 RVIVVGAGMSGISAAKRLSEA-GITDLLIL 30
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 37.0 bits (84), Expect = 0.004
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
S+ ++G G + A ++ R P V ++++
Sbjct: 3 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 37
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 37.4 bits (85), Expect = 0.004
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ I GAGI GLS AL L + VT++
Sbjct: 3 DILIAGAGIGGLSCALALHQA-GIGKVTLL 31
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 37.1 bits (84), Expect = 0.006
Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
M + V +LG G+ + + V +
Sbjct: 3 MDEEYDVIVLGTGLTECILSGIMSVN--GKKVLHM 35
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 36.9 bits (84), Expect = 0.007
Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETT 312
V ++G+G G S A+ V +I + + + AAG + + T
Sbjct: 19 VVVVGSGGAGFSAAISATDS--GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKIT 76
Query: 313 KEWIRYSYDHYA 324
D
Sbjct: 77 DSPELMFEDTMK 88
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 35.9 bits (81), Expect = 0.008
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ K+A+LGAG +S A L R D+T+
Sbjct: 4 SAKIALLGAGPASISCASFL-ARLGYSDITIF 34
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 33.9 bits (77), Expect = 0.009
Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPD 308
V I+G G+ GLS R V+ + + + +
Sbjct: 4 QGKNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEW 61
Query: 309 LETTKEWIR---YSYDHYAGLLSENCGVQVI 336
L + + H + + + G++++
Sbjct: 62 LMAADLIVASPGIALAHPSLSAAADAGIEIV 92
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 35.0 bits (80), Expect = 0.012
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADK 284
M KVAI+G+G IG +++ R ++ +
Sbjct: 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI 38
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 35.9 bits (82), Expect = 0.012
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI-----------ADKFNMDTTSDGAAGLFEP 300
I+G+G+ G A EL++ N V VI + A +F
Sbjct: 3 DYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT 60
Query: 301 SPNFMGPDLETTKEWIRYSYDHY 323
+ ++ + E+ R++
Sbjct: 61 NDKYIWDYVNDLVEFNRFTNSPL 83
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 35.3 bits (80), Expect = 0.014
Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 2/104 (1%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDL 309
N ++ I+G+G + A+ R + D G NF G
Sbjct: 5 NTRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPE 62
Query: 310 ETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHY 353
+ + + + + + + + +
Sbjct: 63 GILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSK 106
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 34.7 bits (79), Expect = 0.017
Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 11/123 (8%)
Query: 244 PKVMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPN 303
P ++ KVA++G+G+IG + R DV + A L +
Sbjct: 1 PALVQRRKKVAMIGSGMIGGTMGYLCALR-ELADVVLYD--VVKGMPEGKALDLSHVTSV 57
Query: 304 FMGPDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKR 363
+ ++ ++ K +E + K
Sbjct: 58 V--------DTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKI 109
Query: 364 MSE 366
+ E
Sbjct: 110 IRE 112
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 35.5 bits (80), Expect = 0.019
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 253 VAILGAGIIGLSTALELQR---RFPNCDVTVIADKFNMDTTSDGAAGLFEP 300
V I+GAG GL A L + P+ V +I DK +G A +
Sbjct: 10 VLIVGAGPAGLMAARVLSEYVRQKPDLKVRII-DK-RSTKVYNGQADGLQC 58
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 35.2 bits (80), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
M + I+GAG GL A +L + VTV
Sbjct: 1 MSQYSENIIIGAGAAGLFCAAQLAKL--GKSVTVF 33
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 34.7 bits (78), Expect = 0.021
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287
+N V I+G G+ G+ A L+ ++ ++ D +
Sbjct: 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVI 40
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 35.2 bits (79), Expect = 0.024
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ +++ V +LG GI + L V I
Sbjct: 2 IDTDYDVIVLGTGITECILSGLLSVD--GKKVLHI 34
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 35.1 bits (79), Expect = 0.028
Identities = 30/345 (8%), Positives = 79/345 (22%), Gaps = 33/345 (9%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETT 312
++G G+ GL A+ Q++ V++ + S A G + S
Sbjct: 8 SLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDN 65
Query: 313 KEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEI 372
++ + + + + K+ ++ A + RM+ +
Sbjct: 66 EDLHFMDTVKGSDWGCDQKVAR-MFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKT 124
Query: 373 GPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNRDSLTVVRGPL 432
+ + R L G +
Sbjct: 125 TITEEDF-----------RHGLIHSRDFGG----------------TKKWRTCYTADATG 157
Query: 433 HEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVY 492
H + + C D + + + ++
Sbjct: 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATG 217
Query: 493 KRMSEEELAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKNFASLVRLAGAYIIPSYGGLV 552
+ G ++ ++ ++ ++ +L G +
Sbjct: 218 GYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMGGIRTDYRGEAKLKGLFSAGEAACWD 277
Query: 553 TLGGTQDYGNARLGVDRFDSRA---ILNRTAAVRPEILAAPVEKV 594
G + GN+ A + ++ +EK
Sbjct: 278 MHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKF 322
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 33.5 bits (76), Expect = 0.030
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 3/101 (2%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMG 306
M ++ KV ++G G +G S A + ++ + VI D T D E + F
Sbjct: 2 MPNHQKVVLVGDGAVGSSYAFAMAQQ-GIAEEFVIVDVVKDRTKGDALD--LEDAQAFTA 58
Query: 307 PDLETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQ 347
P + E+ + + + +L
Sbjct: 59 PKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLN 99
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 33.9 bits (76), Expect = 0.033
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287
V +LGAG+ +S EL++ +TV+ D+
Sbjct: 5 PVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 40
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 33.5 bits (75), Expect = 0.036
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
KV I+G G G A +L + +VTVI
Sbjct: 2 KVVIVGNGPGGFELAKQLSQT---YEVTVI 28
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 34.6 bits (78), Expect = 0.040
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETT 312
V I+G+G GL+ A+ + V ++ + + AAG + L
Sbjct: 26 VVIIGSGGAGLAAAVSARDA--GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE 83
Query: 313 KEWIRYSYDHYAG 325
+ D G
Sbjct: 84 DKKQIMIDDTMKG 96
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 34.5 bits (78), Expect = 0.041
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ V I+GAG GLS A + + P+ V +I
Sbjct: 49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCII 81
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 33.9 bits (76), Expect = 0.046
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI 281
V ++G G GL A+ +V ++
Sbjct: 5 VIVIGGGPSGLMAAIGAAEE--GANVLLL 31
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 33.7 bits (76), Expect = 0.074
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAG 296
++GAG G+ AL++ + +++ F + + A G
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQSGQT--CALLSKVFPTRSHTVSAQG 51
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 32.9 bits (74), Expect = 0.081
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ K+ ILG+G G + A+ R N +I
Sbjct: 5 HSKLLILGSGPAGYTAAVYAARA--NLQPVLI 34
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 33.1 bits (74), Expect = 0.090
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
Query: 252 KVAILGAGIIGLSTALELQRR-----FPNCDVTVI 281
+AI+G+G A L + + V ++
Sbjct: 4 YIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDML 38
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 32.0 bits (72), Expect = 0.090
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287
K+ I+G G +G STA L + V+ D
Sbjct: 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDKK 36
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 33.0 bits (74), Expect = 0.11
Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI 281
V ++GAG G + +L ++ +V ++
Sbjct: 22 VLVVGAGSAGFNASLAAKKA--GANVILV 48
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose
oxidoreductase, N-terminal domain {Zymomonas mobilis
[TaxId: 542]}
Length = 221
Score = 32.4 bits (72), Expect = 0.12
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 231 GLFFIPT----QSCPANPKVMGSNHK--VAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
G +PT + P + M + + AI+G G L+ L + + +
Sbjct: 8 GASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVS 66
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 33.0 bits (74), Expect = 0.13
Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 6/147 (4%)
Query: 253 VAILGAGIIGLSTALELQR--RFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLE 310
+ I+G G G A E + VT++ +K ++ + A GL S DL
Sbjct: 24 ILIIGGGFSGCGAAYEAAYWAKLGGLKVTLV-EKAAVERSGAVAQGL---SAINTYIDLT 79
Query: 311 TTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELA 370
E D+ + + G+ + + + K LP++K + +
Sbjct: 80 GRSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVR 139
Query: 371 EIGPGDWKYGIYMSTLVIPNRIFLPWC 397
E +G ++
Sbjct: 140 EGQWQIMIHGESYKPIIAEAAKMAVGE 166
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus
[TaxId: 2714]}
Length = 105
Score = 30.9 bits (70), Expect = 0.13
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287
K+ I +G+ GL+ ++ R+ D+ + D +
Sbjct: 2 KIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARV 37
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 32.0 bits (71), Expect = 0.16
Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETT 312
V I+G+G G + A+ R+ ++ ++F G N++
Sbjct: 4 VLIVGSGPAGAAAAIYSARK--GIRTGLMGERF------GGQILDTVDIENYISVPKTEG 55
Query: 313 KEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHY 353
++ H + Q + A E +
Sbjct: 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET 96
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 31.8 bits (71), Expect = 0.18
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 250 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIA 282
+ A+LG G G + A L + V
Sbjct: 1 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWD 31
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 31.8 bits (71), Expect = 0.24
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ V ++GAG GLS A E+ + PN V +I
Sbjct: 32 AETDVVVVGAGSAGLSAAYEISKN-PNVQVAII 63
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 30.8 bits (69), Expect = 0.28
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 251 HKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSP 302
K++I+GAG +G +TA L + D+ ++ A L+E SP
Sbjct: 2 KKISIIGAGFVGSTTAHWLAAK-ELGDIVLLDI--VEGVPQGKALDLYEASP 50
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 30.8 bits (69), Expect = 0.30
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 249 SNHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
S K+ ++G G +G++ A+ + + D + D
Sbjct: 18 SRCKITVVGVGDVGMACAISILLK-GLADELALVD 51
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM
{Escherichia coli [TaxId: 562]}
Length = 164
Score = 30.7 bits (68), Expect = 0.32
Identities = 4/36 (11%), Positives = 11/36 (30%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNM 287
++ ++G G I L + + +
Sbjct: 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRA 38
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli
[TaxId: 562]}
Length = 295
Score = 31.5 bits (70), Expect = 0.32
Identities = 11/72 (15%), Positives = 18/72 (25%), Gaps = 5/72 (6%)
Query: 4 DHHFGVWLIEEF----LIGLASGSHIKVPGVEMIPVEAFRLVPHSSGSYIVVDGEVLDYG 59
D + + + S P + F + +DGE L
Sbjct: 214 DGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQA-PHDITFNLDGEPLSGQ 272
Query: 60 PIQAEIFPGLIE 71
EI P +
Sbjct: 273 NFHIEILPAALR 284
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 30.4 bits (68), Expect = 0.32
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFM 305
K+ ++GAG +G +TA L + V+ D A ++E P +
Sbjct: 2 KITVIGAGNVGATTAFRLAEK-QLARELVLLD-VVEGIPQGKALDMYESGPVGL 53
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 31.3 bits (70), Expect = 0.34
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
V ++GAG GL L+ V VI
Sbjct: 9 DVLVVGAGFSGLYALYRLREL--GRSVHVI 36
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 30.4 bits (68), Expect = 0.35
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 311
K+ I+G G +G + A L + D V D N + N
Sbjct: 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFID-ANEAKVKADQIDFQDAMANLEAHGNIV 60
Query: 312 TKEW 315
+W
Sbjct: 61 INDW 64
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 31.4 bits (70), Expect = 0.38
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAG 296
V I+G+G GLS AL L V V++ + ++ A G
Sbjct: 10 VLIIGSGAAGLSLALRLA---DQHQVIVLSKGPVTEGSTFYAQG 50
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex
aeolicus [TaxId: 63363]}
Length = 171
Score = 30.7 bits (68), Expect = 0.39
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
V I+G G +G S A L+R +
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGY 32
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 30.4 bits (68), Expect = 0.41
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 242 ANPKVMGSNHKVAILGAGIIGLSTALELQRRFPNCD----VTVIADKFNMDTTSDGAAGL 297
A + N+K+ ++G G +G++ A+ + + D V V+ DK + L
Sbjct: 12 AEEEATVPNNKITVVGVGQVGMACAISILGK-SLADELALVDVLEDKLKGEMMDLQHGSL 70
Query: 298 FEPSPNFMGPDL 309
F +P +
Sbjct: 71 FLQTPKIVADKD 82
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment
{Cow (Bos taurus) [TaxId: 9913]}
Length = 336
Score = 31.0 bits (70), Expect = 0.44
Identities = 24/191 (12%), Positives = 60/191 (31%), Gaps = 28/191 (14%)
Query: 333 VQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSE-EELAE--IGPGDWKY-----GIYMS 384
+ N ++ + +C + +Y +S LA + G+++ S
Sbjct: 9 INGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANS 68
Query: 385 TLVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNRDSLTVV-----RGPLHEKVSSG 439
T + C+ + + + + ++ RG E ++
Sbjct: 69 TRTW--KEVCFACVDGKEFRLA----QMCGLHIVVHADELEELINYYQDRGYFEELITML 122
Query: 440 PRTCAMQRAM--QHDHYAGLLSENCGVQVI-------NGYNLAKSEKQCAENHYLKPVLP 490
++RA A L S+ ++ + N+ K + + H ++
Sbjct: 123 EAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVF 182
Query: 491 VYKRMSEEELA 501
+Y + E + A
Sbjct: 183 LYDKYEEYDNA 193
Score = 27.1 bits (60), Expect = 7.1
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 320 YDHYAGLLSENCGVQVI-------NGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELA 370
+ A L S+ ++ + N+ K + + H ++ +Y + E + A
Sbjct: 136 FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNA 193
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 30.3 bits (67), Expect = 0.45
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIA 282
K+ +LG G +G L ++ +V
Sbjct: 2 KITVLGCGALGQLWLTALCKQ--GHEVQGWL 30
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048
{Vibrio cholerae [TaxId: 666]}
Length = 167
Score = 30.2 bits (67), Expect = 0.60
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
K+A++G G I L + ++P+ ++ +
Sbjct: 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTR 34
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 165
Score = 30.1 bits (66), Expect = 0.61
Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 2/137 (1%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 311
K+ ++G G+IG S A +L+RR + ++ + + + + E +
Sbjct: 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAK 59
Query: 312 TKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAE 371
L + S K + A
Sbjct: 60 IIFLCTPIQLILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPMAGTAA 119
Query: 372 IGPGDWKYGIYMSTLVI 388
G + ++++ +
Sbjct: 120 QGIDGAEENLFVNAPYV 136
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase
At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 184
Score = 30.0 bits (66), Expect = 0.66
Identities = 8/72 (11%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 311
++ ++G I PN ++ +A + + A + S G
Sbjct: 3 RIGVMGCADIA-RKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESL 61
Query: 312 TKEWIRYSYDHY 323
++ +
Sbjct: 62 LEDPEIDALYVP 73
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 29.0 bits (64), Expect = 1.2
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 245 KVMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
K+ + I+G G +G A L R+ VI
Sbjct: 32 KISREVKSITIIGGGFLGSELACALGRKARALGTEVI 68
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 28.9 bits (64), Expect = 1.4
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 247 MGSNH--KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
M +N +V ++GAG +G S L + D V+ D
Sbjct: 1 MKNNGGARVVVIGAGFVGASYVFALMNQ-GIADEIVLID 38
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 28.4 bits (63), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 283
KVAI+GAG +G S A + R + V+ D
Sbjct: 3 KVAIIGAGFVGASAAFTMALR-QTANELVLID 33
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 132
Score = 28.3 bits (62), Expect = 1.6
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ I G G +G + A L + + + I
Sbjct: 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 31
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 29.1 bits (64), Expect = 1.6
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 247 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 281
+ +H V I+G G G A++ + + +
Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAAQL--GFNTACV 34
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 28.1 bits (62), Expect = 2.0
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTT-----SDGAAGLFEPSPNFMG 306
K+ +GAG +G ++A ++ ++ ++ + AAG+ + G
Sbjct: 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG 61
Query: 307 PDLETTK 313
D K
Sbjct: 62 ADYSLLK 68
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas
putida [TaxId: 303]}
Length = 133
Score = 28.0 bits (61), Expect = 2.4
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 227 GDKKGLFFIPT-QSCPANPKVMGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKF 285
G ++ T + + + +++++ ++G G IGL A + + + A +
Sbjct: 11 GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 70
Query: 286 NMDTTSDGAAGLFEPSPNFMGPDLET 311
T+ + +E G D+ T
Sbjct: 71 LERVTAPPVSAFYEHLHREAGVDIRT 96
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 28.0 bits (62), Expect = 2.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 252 KVAILGAGIIGLSTALELQRR 272
K+A++GAG +G + A +R
Sbjct: 3 KLAVIGAGAVGSTLAFAAAQR 23
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 28.1 bits (62), Expect = 2.4
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 250 NHKVAILGAGIIGLSTALELQRR 272
K+ ++G+G+IG A + ++
Sbjct: 3 KAKIVLVGSGMIGGVMATLIVQK 25
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 28.7 bits (63), Expect = 2.7
Identities = 29/235 (12%), Positives = 63/235 (26%), Gaps = 16/235 (6%)
Query: 253 VAILGAGIIGLSTALELQRRF----PNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPD 308
V I+GAG GLS A L++ + V ++ ++ + A L + + PD
Sbjct: 35 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPD 94
Query: 309 LETTKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEE 368
+ + + + L + E+
Sbjct: 95 WKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHL----VSWMGEQ 150
Query: 369 LAEIGPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNRDSL--T 426
+G + L + G G +T L + + ++
Sbjct: 151 AEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAE 210
Query: 427 VVRGPL------HEKVSSGPRTCAMQRAMQHDHYAGLLSENCGVQVINGYNLAKS 475
G L + + +++ + G L C +N + +
Sbjct: 211 GCHGHLAKQLYKKFDLRANCEPQGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGT 265
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 28.4 bits (62), Expect = 3.1
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI 281
V +LG G G S A V ++
Sbjct: 9 VVVLGGGPGGYSAAFAAADE--GLKVAIV 35
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH)
{Streptococcus pyogenes [TaxId: 1314]}
Length = 196
Score = 28.0 bits (61), Expect = 3.6
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
K+A+ G+G +GLS + L +VT++
Sbjct: 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIV 28
>d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain
{Micromonospora viridifaciens [TaxId: 1881]}
Length = 142
Score = 27.2 bits (59), Expect = 4.3
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Query: 625 KVYGITSVLFVHRFKAAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTLCNDMHVIPVR 684
+ I+ + + R +A + + Y S G+ ++
Sbjct: 55 GTHTISGLQYTRRQNSANEQ-VADYEIYTSLNGTTWDGPVASGRFTTSLAPQRAVFPARD 113
Query: 685 GQTIRIVHNYGHGGYGVTS 703
+ IR+V G+ +
Sbjct: 114 ARYIRLVALSEQTGHKYAA 132
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312
{Thermotoga maritima [TaxId: 2336]}
Length = 181
Score = 27.6 bits (60), Expect = 4.4
Identities = 6/37 (16%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 252 KVAILGAGIIGLSTALELQRRFPN-CDVTVIADKFNM 287
++ I+G GI L + + ++T + +
Sbjct: 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRS 41
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 27.8 bits (60), Expect = 4.8
Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 7/199 (3%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLETT 312
+ I+G G GL+ A E + + V V+ ++ G + + L
Sbjct: 6 LIIIGGGSGGLAAAKEAAKF--DKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKLMHQ 63
Query: 313 KEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLKPVLPVYKRMSEEELAEI 372
+ + N G ++ + + + +++ + Y+ E+
Sbjct: 64 AALLGQALKDSR-----NYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVY 118
Query: 373 GPGDWKYGIYMSTLVIPNRIFLPWCMQKDGPSNLGERPSTLSVELYHYNRDSLTVVRGPL 432
K+ + N+ + GERP L + L V +
Sbjct: 119 ENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIRDSCTRTIGLETVGVKI 178
Query: 433 HEKVSSGPRTCAMQRAMQH 451
+EK P T Q + +
Sbjct: 179 NEKTGKIPVTDEEQTNVPY 197
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 202
Score = 27.3 bits (59), Expect = 5.0
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 252 KVAILGAGIIGLSTALEL 269
+++I G G +G A L
Sbjct: 2 RISIFGLGYVGAVCAGCL 19
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 156
Score = 27.2 bits (59), Expect = 5.1
Identities = 19/104 (18%), Positives = 29/104 (27%), Gaps = 1/104 (0%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 311
KVA +G G +G A L RRFP +K + + + + T
Sbjct: 2 KVAFIGLGAMGYPMAGHLARRFPTLVWNRTFEK-ALRHQEEFGSEAVPLERVAEARVIFT 60
Query: 312 TKEWIRYSYDHYAGLLSENCGVQVINGYNLAKSEKQCAENHYLK 355
R Y+ L + E L+
Sbjct: 61 CLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLR 104
>d1gpia_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase,
Endoglucanase I, CBH1) {Phanerochaete chrysosporium,
Cel7d [TaxId: 5306]}
Length = 431
Score = 27.5 bits (61), Expect = 6.4
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 180 DLSWEVSVSVQQVTQTDEKVTPNLEIKQLNVQVTKV--NPKSQTNATQNGDKKGLFFIPT 237
D S +V Q +T + EI+++ +Q KV N + + I
Sbjct: 270 DTSKPFTVVTQFLTNDNTSTGTLSEIRRIYIQNGKVIQNSVANIPGVDPVNS-----ITD 324
Query: 238 QSCPANPKVMGSNHKVAILGAGIIGLSTALE 268
C G + A G G+ + AL
Sbjct: 325 NFCAQQKTAFGDTNWFAQKG-GLKQMGEALG 354
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 26.8 bits (58), Expect = 7.6
Identities = 6/29 (20%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI 281
++G G GL++A V+
Sbjct: 6 YLVIGGGSGGLASARRAAEL--GARAAVV 32
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 26.4 bits (57), Expect = 7.8
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDT 289
+V +G G + + A L+ R +V + + T
Sbjct: 2 RVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPST 37
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 26.7 bits (58), Expect = 8.0
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 253 VAILGAGIIGLSTALELQRRFPNCDVTVI 281
++GAG G A+ + VT++
Sbjct: 6 TLVVGAGPGGYVAAIRAAQL--GQKVTIV 32
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 212
Score = 26.6 bits (57), Expect = 8.7
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 252 KVAIL-GAGIIGLSTALELQRRFPNCDVTVIA 282
+VA+L G G +G AL L ++ V +
Sbjct: 2 RVALLGGTGNLGKGLALRLATL--GHEIVVGS 31
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 26.4 bits (57), Expect = 9.8
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 252 KVAILGAGIIGLSTALELQRRFPNCDVTVI 281
V ++G G++G A V ++
Sbjct: 6 HVTVIGGGLMGAGIAQVAAAT--GHTVVLV 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.410
Gapped
Lambda K H
0.267 0.0458 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,759,282
Number of extensions: 132812
Number of successful extensions: 404
Number of sequences better than 10.0: 1
Number of HSP's gapped: 399
Number of HSP's successfully gapped: 102
Length of query: 728
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 636
Effective length of database: 1,144,436
Effective search space: 727861296
Effective search space used: 727861296
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.0 bits)