BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16978
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O76762|ABDA_ANOGA Homeobox protein abdominal-A homolog OS=Anopheles gambiae GN=abd-A
PE=2 SV=1
Length = 308
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 100/114 (87%), Gaps = 2/114 (1%)
Query: 21 FAKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 80
F +++C +GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER
Sbjct: 122 FDRVVCG-DFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 180
Query: 81 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQDRLKQEK-HAKMDHHSHHQS 133
QIKIWFQNRRMKLKKELRAVKEINEQARREREEQD++K E + HHS Q+
Sbjct: 181 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNESLKSAQQHHSQKQA 234
>sp|P29552|ABDA_AEDAE Homeobox protein abdominal-A homolog OS=Aedes aegypti GN=abd-A PE=3
SV=2
Length = 239
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 101/114 (88%), Gaps = 3/114 (2%)
Query: 21 FAKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 80
F +++C +GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER
Sbjct: 5 FDRVVCG-DFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 63
Query: 81 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQDRLKQE--KHAKMDHHSHHQ 132
QIKIWFQNRRMKLKKELRAVKEINEQARREREEQD++K + K A+ H+S Q
Sbjct: 64 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNDSLKSAQQHHNSQKQ 117
>sp|P29555|ABDA_DROME Homeobox protein abdominal-A OS=Drosophila melanogaster GN=abd-A
PE=2 SV=2
Length = 590
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/109 (78%), Positives = 97/109 (88%), Gaps = 1/109 (0%)
Query: 13 LVIVLNVHFAKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 72
L + F +++C +GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA
Sbjct: 374 LTDWMGSPFERVVCG-DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 73 HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDRLKQEK 121
HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARR+REEQ+++K ++
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQE 481
>sp|B0W1V2|ABDA_CULQU Homeobox protein abdominal-A homolog OS=Culex quinquefasciatus
GN=abd-A PE=3 SV=1
Length = 216
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 93/99 (93%)
Query: 22 AKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 81
+ +L +L+ PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ
Sbjct: 27 SPLLGRLRPRRPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 86
Query: 82 IKIWFQNRRMKLKKELRAVKEINEQARREREEQDRLKQE 120
IKIWFQNRRMKLKKELRAVKEINEQARREREEQD++K +
Sbjct: 87 IKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKND 125
>sp|P29556|ABDA_SCHGR Homeobox protein abdominal-A homolog (Fragment) OS=Schistocerca
gregaria GN=ABD-A PE=3 SV=1
Length = 157
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 106/154 (68%), Gaps = 38/154 (24%)
Query: 33 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 92
PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 1 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 60
Query: 93 LKKELRAVKEINEQARREREEQDRLK---------------------------------- 118
LKKELRAVKEINEQARREREEQDRLK
Sbjct: 61 LKKELRAVKEINEQARREREEQDRLKQQQEKKLEQQQQQQQQQQQQQQQQQQQQAPPQQP 120
Query: 119 QEKHAKMDHHSHHQSMMGGLDK---NSDLLKAVV 149
++H + HH H Q + GL+K +DLLKAV
Sbjct: 121 PQQHHTISHHLHDQHKL-GLEKAPPGADLLKAVA 153
>sp|Q26430|ABDA_MANSE Homeobox protein abdominal-A homolog (Fragment) OS=Manduca sexta
GN=ABD-A PE=3 SV=1
Length = 97
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/85 (97%), Positives = 84/85 (98%)
Query: 33 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 92
NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 1 SNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 60
Query: 93 LKKELRAVKEINEQARREREEQDRL 117
LKKELRAVKEINEQARREREEQDR+
Sbjct: 61 LKKELRAVKEINEQARREREEQDRM 85
>sp|Q05007|ABDA_ARTSF Homeobox protein abdominal-A homolog (Fragment) OS=Artemia
franciscana GN=ABDA PE=3 SV=1
Length = 139
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 83/83 (100%)
Query: 33 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 92
PNGCPRRRGRQTYTR+QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 1 PNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 60
Query: 93 LKKELRAVKEINEQARREREEQD 115
LKKELRAVKEINEQAR++REEQ+
Sbjct: 61 LKKELRAVKEINEQARKDREEQE 83
>sp|Q07961|ABDA_TRICA Homeobox protein abdominal-A homolog OS=Tribolium castaneum
GN=ABD-A PE=2 SV=2
Length = 343
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/141 (65%), Positives = 108/141 (76%), Gaps = 19/141 (13%)
Query: 21 FAKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 80
F +++C GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER
Sbjct: 204 FDRVVC-----GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 258
Query: 81 QIKIWFQNRRMKLKKELRAVKEIN-----------EQARREREEQDRLKQEKHAKMDHHS 129
QIKIWFQNRRMKLKKELRAVKEIN ++++E+Q +++Q+ H+ + H
Sbjct: 259 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH- 317
Query: 130 HHQSMMGGLDKN--SDLLKAV 148
HH M LDK+ SDLLKAV
Sbjct: 318 HHDPMKMSLDKSGGSDLLKAV 338
>sp|P15856|ABDA_APIME Homeobox protein abdominal-A homolog (Fragment) OS=Apis mellifera
GN=ABD-A PE=3 SV=1
Length = 74
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/74 (97%), Positives = 73/74 (98%)
Query: 31 SGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 90
GPNGCPRRRGRQTYTRFQTLELEKEFH+NHYLTRRRRIEIAHALCLTERQIKIWFQNRR
Sbjct: 1 PGPNGCPRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 60
Query: 91 MKLKKELRAVKEIN 104
MKLKKELRAVKEIN
Sbjct: 61 MKLKKELRAVKEIN 74
>sp|Q8T940|UBX_JUNCO Homeotic protein ultrabithorax OS=Junonia coenia GN=Ubx PE=2 SV=1
Length = 253
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/76 (85%), Positives = 72/76 (94%), Gaps = 1/76 (1%)
Query: 31 SGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 90
+G NG RRRGRQTYTR+QTLELEKEFH NHYLTRRRRIE+AHALCLTERQIKIWFQNRR
Sbjct: 153 AGANGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 211
Query: 91 MKLKKELRAVKEINEQ 106
MKLKKE++A+KE+NEQ
Sbjct: 212 MKLKKEIQAIKELNEQ 227
>sp|P83950|UBX_DROSI Homeotic protein ultrabithorax OS=Drosophila simulans GN=Ubx PE=3
SV=1
Length = 389
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
G NG RRRGRQTYTR+QTLELEKEFH NHYLTRRRRIE+AHALCLTERQIKIWFQNRRM
Sbjct: 290 GTNGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRM 348
Query: 92 KLKKELRAVKEIN 104
KLKKE++A+KE+N
Sbjct: 349 KLKKEIQAIKELN 361
>sp|P83949|UBX_DROME Homeotic protein ultrabithorax OS=Drosophila melanogaster GN=Ubx
PE=1 SV=1
Length = 389
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
G NG RRRGRQTYTR+QTLELEKEFH NHYLTRRRRIE+AHALCLTERQIKIWFQNRRM
Sbjct: 290 GTNGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRM 348
Query: 92 KLKKELRAVKEIN 104
KLKKE++A+KE+N
Sbjct: 349 KLKKEIQAIKELN 361
>sp|P20822|UBX_DROPS Homeotic protein ultrabithorax OS=Drosophila pseudoobscura
pseudoobscura GN=Ubx PE=2 SV=3
Length = 385
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
G NG RRRGRQTYTR+QTLELEKEFH NHYLTRRRRIE+AHALCLTERQIKIWFQNRRM
Sbjct: 285 GTNGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRM 343
Query: 92 KLKKELRAVKEIN 104
KLKKE++A+KE+N
Sbjct: 344 KLKKEIQAIKELN 356
>sp|P02830|HXA7_MOUSE Homeobox protein Hox-A7 OS=Mus musculus GN=Hoxa7 PE=2 SV=2
Length = 229
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 63/69 (91%), Gaps = 3/69 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 122 MRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 178
Query: 88 NRRMKLKKE 96
NRRMK KKE
Sbjct: 179 NRRMKWKKE 187
>sp|P09071|HXA7_XENLA Homeobox protein Hox-A7 OS=Xenopus laevis GN=hoxa7 PE=2 SV=1
Length = 209
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 75/97 (77%), Gaps = 7/97 (7%)
Query: 18 NVHFAKMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 77
+ HF ++ ++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCL
Sbjct: 106 DSHF-RIYPWMRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 161
Query: 78 TERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQ 114
TERQIKIWFQNRRMK KKE KE ++Q EE
Sbjct: 162 TERQIKIWFQNRRMKWKKEH---KEESDQTPDAGEES 195
>sp|Q01622|HLOX2_HELRO Homeobox protein LOX2 (Fragment) OS=Helobdella robusta GN=LOX2 PE=2
SV=1
Length = 429
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
GPN RRRGRQTYTR+QTLELEKEF FN YLTRRRRIE++H L LTERQIKIWFQNRRM
Sbjct: 211 GPNSNQRRRGRQTYTRYQTLELEKEFKFNRYLTRRRRIELSHTLYLTERQIKIWFQNRRM 270
Query: 92 KLKKELRAVKEINE 105
K KKE++A++E+NE
Sbjct: 271 KEKKEVQAIRELNE 284
>sp|Q9IA25|HXA7_HETFR Homeobox protein Hox-A7 OS=Heterodontus francisci GN=HOXA7 PE=3
SV=1
Length = 208
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 65/72 (90%), Gaps = 3/72 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ +GP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 128 MRNAGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 184
Query: 88 NRRMKLKKELRA 99
NRRMK KKE +A
Sbjct: 185 NRRMKWKKETKA 196
>sp|Q90VZ9|HXA7_CHICK Homeobox protein Hox-A7 OS=Gallus gallus GN=HOXA7 PE=2 SV=1
Length = 219
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 63/69 (91%), Gaps = 3/69 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 122 MRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 178
Query: 88 NRRMKLKKE 96
NRRMK KKE
Sbjct: 179 NRRMKWKKE 187
>sp|A2T7F3|HXA7_PANTR Homeobox protein Hox-A7 OS=Pan troglodytes GN=HOXA7 PE=3 SV=1
Length = 230
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 63/69 (91%), Gaps = 3/69 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 123 MRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 179
Query: 88 NRRMKLKKE 96
NRRMK KKE
Sbjct: 180 NRRMKWKKE 188
>sp|P09023|HXB6_MOUSE Homeobox protein Hox-B6 OS=Mus musculus GN=Hoxb6 PE=2 SV=2
Length = 224
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Query: 26 CQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 85
C GP+G RRGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAHALCLTERQIKIW
Sbjct: 137 CNSSSFGPSG---RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIW 193
Query: 86 FQNRRMKLKKE 96
FQNRRMK KKE
Sbjct: 194 FQNRRMKWKKE 204
>sp|P31268|HXA7_HUMAN Homeobox protein Hox-A7 OS=Homo sapiens GN=HOXA7 PE=2 SV=3
Length = 230
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 63/69 (91%), Gaps = 3/69 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 123 MRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 179
Query: 88 NRRMKLKKE 96
NRRMK KKE
Sbjct: 180 NRRMKWKKE 188
>sp|P17509|HXB6_HUMAN Homeobox protein Hox-B6 OS=Homo sapiens GN=HOXB6 PE=1 SV=4
Length = 224
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Query: 26 CQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 85
C GP+G RRGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAHALCLTERQIKIW
Sbjct: 137 CNSSSFGPSG---RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIW 193
Query: 86 FQNRRMKLKKE 96
FQNRRMK KKE
Sbjct: 194 FQNRRMKWKKE 204
>sp|Q1KKY0|HXB6A_TAKRU Homeobox protein Hox-B6a OS=Takifugu rubripes GN=hoxb6a PE=3 SV=1
Length = 274
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 60/66 (90%)
Query: 31 SGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 90
+G G P RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRR
Sbjct: 182 NGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 241
Query: 91 MKLKKE 96
MK KKE
Sbjct: 242 MKWKKE 247
>sp|Q9YGT4|HXB6B_DANRE Homeobox protein Hox-B6b OS=Danio rerio GN=hoxb6b PE=2 SV=2
Length = 224
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 61/71 (85%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
G G RRGRQTYTRFQTLELEKEFHFN YLTRRRRIEI+HALCLTERQIKIWFQNRRM
Sbjct: 141 GMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRM 200
Query: 92 KLKKELRAVKE 102
K KKE +AV
Sbjct: 201 KWKKENKAVNS 211
>sp|Q24645|ANTP_DROSU Homeotic protein antennapedia OS=Drosophila subobscura GN=Antp PE=3
SV=1
Length = 394
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 60/73 (82%)
Query: 38 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 97
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 313 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 372
Query: 98 RAVKEINEQARRE 110
+ E +
Sbjct: 373 KTKGEPGSGGEGD 385
>sp|P02833|ANTP_DROME Homeotic protein antennapedia OS=Drosophila melanogaster GN=Antp
PE=1 SV=1
Length = 378
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 60/73 (82%)
Query: 38 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 97
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 297 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 356
Query: 98 RAVKEINEQARRE 110
+ E +
Sbjct: 357 KTKGEPGSGGEGD 369
>sp|Q1KKX1|HXB6B_TAKRU Homeobox protein Hox-B6b OS=Takifugu rubripes GN=hoxb6b PE=3 SV=1
Length = 233
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/66 (86%), Positives = 60/66 (90%)
Query: 31 SGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 90
+GP G RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEI+HALCLTERQIKIWFQNRR
Sbjct: 148 AGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRR 207
Query: 91 MKLKKE 96
MK KKE
Sbjct: 208 MKWKKE 213
>sp|A1YFA5|HXB7_GORGO Homeobox protein Hox-B7 OS=Gorilla gorilla gorilla GN=HOXB7 PE=3
SV=1
Length = 217
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 65/83 (78%), Gaps = 7/83 (8%)
Query: 34 NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL 93
+G R+RGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 133 SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 192
Query: 94 KKELRAVKEINEQARREREEQDR 116
KKE N+ A QDR
Sbjct: 193 KKE-------NKTAGPGTTAQDR 208
>sp|P24061|HXA7_COTJA Homeobox protein Hox-A7 OS=Coturnix coturnix japonica GN=HOXA7 PE=2
SV=1
Length = 242
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 7/111 (6%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIE AHALCLTERQIKIWFQ
Sbjct: 122 MRSSGPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEYAHALCLTERQIKIWFQ 178
Query: 88 NRRMKLKK----ELRAVKEINEQARREREEQDRLKQEKHAKMDHHSHHQSM 134
NRRMK KK E + NE +++R + K +K + HS QS+
Sbjct: 179 NRRMKWKKEHKEESSSTPAPNESRQQQRLWRKWKKMKKRRIRESHSRKQSL 229
>sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 OS=Mus musculus GN=Hoxb7 PE=2 SV=2
Length = 217
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 62/69 (89%), Gaps = 3/69 (4%)
Query: 28 LKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 87
++ SGP+ R+RGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAH LCLTERQIKIWFQ
Sbjct: 130 MRSSGPD---RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQ 186
Query: 88 NRRMKLKKE 96
NRRMK KKE
Sbjct: 187 NRRMKWKKE 195
>sp|P21523|HLOX2_HIRME Homeobox protein LOX2 (Fragment) OS=Hirudo medicinalis GN=LOX2 PE=2
SV=1
Length = 118
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 65/73 (89%)
Query: 33 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 92
PN RRRGRQTYTR+QTLELEKEF FN YLTRRRRIE++H L LTERQIKIWFQNRRMK
Sbjct: 1 PNSNQRRRGRQTYTRYQTLELEKEFKFNRYLTRRRRIELSHTLYLTERQIKIWFQNRRMK 60
Query: 93 LKKELRAVKEINE 105
KKE++A++E+NE
Sbjct: 61 EKKEVQAIRELNE 73
>sp|Q9TT89|HXB7_BOVIN Homeobox protein Hox-B7 OS=Bos taurus GN=HOXB7 PE=2 SV=1
Length = 217
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 34 NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL 93
+G R+RGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 133 SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 192
Query: 94 KKE 96
KKE
Sbjct: 193 KKE 195
>sp|P18864|HXB7_RAT Homeobox protein Hox-B7 OS=Rattus norvegicus GN=Hoxb7 PE=2 SV=2
Length = 219
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 34 NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL 93
+G R+RGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 133 SGTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 192
Query: 94 KKE 96
KKE
Sbjct: 193 KKE 195
>sp|Q91771|HXB7A_XENLA Homeobox protein Hox-B7-A OS=Xenopus laevis GN=hoxb7-a PE=2 SV=1
Length = 220
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/65 (86%), Positives = 59/65 (90%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH LCLTERQIKIWFQNRRMK K
Sbjct: 137 GADRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWK 196
Query: 95 KELRA 99
KE +A
Sbjct: 197 KENKA 201
>sp|P04476|HXB7B_XENLA Homeobox protein Hox-B7-B OS=Xenopus laevis GN=hoxb7-b PE=2 SV=1
Length = 220
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/65 (86%), Positives = 59/65 (90%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH LCLTERQIKIWFQNRRMK K
Sbjct: 135 GSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 194
Query: 95 KELRA 99
KE +A
Sbjct: 195 KENKA 199
>sp|Q9IA24|HXA6_HETFR Homeobox protein Hox-A6 OS=Heterodontus francisci GN=HOXA6 PE=3
SV=1
Length = 229
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
GP+G RRGRQTYTRFQTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRM
Sbjct: 148 GPHG---RRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRM 204
Query: 92 KLKKELRAVKEINEQARREREEQDRLKQ 119
K KKE K +N E +D+ +
Sbjct: 205 KWKKE---NKLLNTTESNSEEAEDKTGE 229
>sp|P09629|HXB7_HUMAN Homeobox protein Hox-B7 OS=Homo sapiens GN=HOXB7 PE=1 SV=4
Length = 217
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 34 NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL 93
+G R+RGRQTYTR+QTLELEKEFH+N YLTRRRRIEIAH LCLTERQIKIWFQNRRMK
Sbjct: 133 SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKW 192
Query: 94 KKELRAVKEINEQARREREEQDR 116
KKE N+ A QDR
Sbjct: 193 KKE-------NKTAGPGTTGQDR 208
>sp|Q8AWY9|HXB7A_DANRE Homeobox protein Hox-B7a OS=Danio rerio GN=hoxb7a PE=2 SV=1
Length = 227
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 62/73 (84%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G R+RGRQTY+R+QTLELEKEFHFN YL+RRRRIEIAHALCLTERQIKIWFQNRRMK K
Sbjct: 142 GADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWK 201
Query: 95 KELRAVKEINEQA 107
KE ++ + A
Sbjct: 202 KENKSTDRCSPAA 214
>sp|P14839|HXB6_CHICK Homeobox protein Hox-B6 (Fragment) OS=Gallus gallus GN=HOXB6 PE=3
SV=1
Length = 84
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/65 (86%), Positives = 59/65 (90%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
G + P RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH+LCLTERQIKIWFQNRRM
Sbjct: 1 GSSFGPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRM 60
Query: 92 KLKKE 96
K KKE
Sbjct: 61 KWKKE 65
>sp|P15861|HXB6A_DANRE Homeobox protein Hox-B6a OS=Danio rerio GN=hoxb6a PE=2 SV=1
Length = 228
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/66 (86%), Positives = 59/66 (89%)
Query: 31 SGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 90
+G G RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRR
Sbjct: 143 NGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 202
Query: 91 MKLKKE 96
MK KKE
Sbjct: 203 MKWKKE 208
>sp|O42504|HXC6A_TAKRU Homeobox protein Hox-C6a OS=Takifugu rubripes GN=hoxc6a PE=3 SV=1
Length = 236
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G RRRGRQ Y+R+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK K
Sbjct: 137 GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 196
Query: 95 KE--LRAVKEINEQARREREE-QDRLKQEKHAK 124
KE L + +EQ +EE +DR + K
Sbjct: 197 KESNLTSTVTGSEQTGGSQEEREDRGGATEEGK 229
>sp|P09092|HXA6_MOUSE Homeobox protein Hox-A6 OS=Mus musculus GN=Hoxa6 PE=2 SV=2
Length = 232
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Query: 39 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 98
RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK KKE +
Sbjct: 155 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
Query: 99 AVKEINEQARREREE 113
+ QA E E
Sbjct: 215 LINST--QASGEDSE 227
>sp|P31267|HXA6_HUMAN Homeobox protein Hox-A6 OS=Homo sapiens GN=HOXA6 PE=2 SV=2
Length = 233
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/65 (83%), Positives = 58/65 (89%)
Query: 39 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 98
RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK KKE +
Sbjct: 156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
Query: 99 AVKEI 103
+
Sbjct: 216 LINST 220
>sp|P09634|HXA7_RAT Homeobox protein Hox-A7 (Fragment) OS=Rattus norvegicus GN=Hoxa7
PE=2 SV=1
Length = 105
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/65 (84%), Positives = 59/65 (90%), Gaps = 3/65 (4%)
Query: 32 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 91
GP+G +RGRQTYTR+QTLELEKEFHFN YLTRRR +EIAHALCLTERQIKIWFQNRRM
Sbjct: 2 GPDG---KRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRM 58
Query: 92 KLKKE 96
K KKE
Sbjct: 59 KWKKE 63
>sp|Q5YLH5|HXA6_CHICK Homeobox protein Hox-A6 OS=Gallus gallus GN=HOXA6 PE=2 SV=1
Length = 231
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Query: 39 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 98
RRGRQTYTR+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK KKE +
Sbjct: 154 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 213
Query: 99 AVKEINEQARREREEQD 115
+ + E EE+
Sbjct: 214 FINST-QPGSDETEEKS 229
>sp|P02832|HXC6_XENLA Homeobox protein Hox-C6 OS=Xenopus laevis GN=hoxc6 PE=2 SV=2
Length = 234
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 57/62 (91%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G RRRGRQ Y+R+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK K
Sbjct: 138 GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 197
Query: 95 KE 96
KE
Sbjct: 198 KE 199
>sp|Q9PWD4|HXA7_MORSA Homeobox protein Hox-A7 OS=Morone saxatilis GN=hoxa7 PE=3 SV=1
Length = 225
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
Query: 23 KMLCQLKQSGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 82
+M ++ S P R+RGRQTY+R+QTLELEKEFHFN YLTRRRRIEIAHALCL+ERQI
Sbjct: 114 RMYPWMRASDPT---RKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQI 170
Query: 83 KIWFQNRRMKLKKE 96
KIWFQNRRMK KK+
Sbjct: 171 KIWFQNRRMKWKKD 184
>sp|P15862|HXC6A_DANRE Homeobox protein Hox-C6a OS=Danio rerio GN=hoxc6a PE=2 SV=2
Length = 231
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 58/69 (84%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G RRRGRQ Y+R+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK K
Sbjct: 139 GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 198
Query: 95 KELRAVKEI 103
KE +
Sbjct: 199 KETNLTSTV 207
>sp|P10629|HXC6_MOUSE Homeobox protein Hox-C6 OS=Mus musculus GN=Hoxc6 PE=2 SV=2
Length = 235
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 57/62 (91%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G RRRGRQ Y+R+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK K
Sbjct: 138 GADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 197
Query: 95 KE 96
KE
Sbjct: 198 KE 199
>sp|P09630|HXC6_HUMAN Homeobox protein Hox-C6 OS=Homo sapiens GN=HOXC6 PE=2 SV=3
Length = 235
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 57/62 (91%)
Query: 35 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 94
G RRRGRQ Y+R+QTLELEKEFHFN YLTRRRRIEIA+ALCLTERQIKIWFQNRRMK K
Sbjct: 138 GADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 197
Query: 95 KE 96
KE
Sbjct: 198 KE 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,917,568
Number of Sequences: 539616
Number of extensions: 2012609
Number of successful extensions: 18547
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 15990
Number of HSP's gapped (non-prelim): 2573
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)