BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16981
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61082|UBC12_MOUSE NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1
Length = 183
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 129/147 (87%), Positives = 138/147 (93%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+NELNLPKTC F +PDDLL+FKL+I PDEGFY+SGKFVFSFKVG YPH+PPKVKCE
Sbjct: 37 DINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE 96
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEGNVCLNILREDWKPVLTINSI+YGLQYLFLEPNPEDPLNKEAAEVLQNN
Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCLK 302
RRLFEQNVQ++MRGGYIGS YFERCLK
Sbjct: 157 RRLFEQNVQRSMRGGYIGSTYFERCLK 183
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKA--ELELP 74
MIKLFSLKQQKK+ E+ KKASAAQLRI K EL LP
Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLP 44
>sp|P61081|UBC12_HUMAN NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1
Length = 183
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 129/147 (87%), Positives = 138/147 (93%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+NELNLPKTC F +PDDLL+FKL+I PDEGFY+SGKFVFSFKVG YPH+PPKVKCE
Sbjct: 37 DINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE 96
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEGNVCLNILREDWKPVLTINSI+YGLQYLFLEPNPEDPLNKEAAEVLQNN
Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCLK 302
RRLFEQNVQ++MRGGYIGS YFERCLK
Sbjct: 157 RRLFEQNVQRSMRGGYIGSTYFERCLK 183
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKA--ELELP 74
MIKLFSLKQQKK+ E+ KKASAAQLRI K EL LP
Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLP 44
>sp|A3KN22|UBC12_BOVIN NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1
Length = 183
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 129/147 (87%), Positives = 138/147 (93%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+NELNLPKTC F +PDDLL+FKL+I PDEGFY+SGKFVFSFKVG YPH+PPKVKCE
Sbjct: 37 DINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE 96
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEGNVCLNILREDWKPVLTINSI+YGLQYLFLEPNPEDPLNKEAAEVLQNN
Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCLK 302
RRLFEQNVQ++MRGGYIGS YFERCLK
Sbjct: 157 RRLFEQNVQRSMRGGYIGSTYFERCLK 183
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKA--ELELP 74
MIKLFSLKQQKK+ E+ KKASAAQLRI K EL LP
Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLP 44
>sp|Q6P8D9|UBC12_XENTR NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2
SV=1
Length = 183
Score = 278 bits (710), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/147 (87%), Positives = 137/147 (93%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+NELNLPKTC EF + DDLL+FKL+I PDEGFY+ GKFVFSFKVG YPH+PPKVKCE
Sbjct: 37 DINELNLPKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCE 96
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEGNVCLNILREDWKPVLTINSI+YGLQYLFLEPNPEDPLNKEAAEVLQNN
Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCLK 302
RRLFEQNVQ++MRGGYIGS YFERCLK
Sbjct: 157 RRLFEQNVQRSMRGGYIGSTYFERCLK 183
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKA--ELELP 74
MIKLFSLKQQKK+ E+ KKASAAQLRI K EL LP
Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLP 44
>sp|Q6DCZ9|UBC12_XENLA NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1
Length = 183
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/147 (86%), Positives = 136/147 (92%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+ ELNLPKTC EF + DDLL+FKL+I PDEGFY+ GKFVFSFKVG YPH+PPKVKCE
Sbjct: 37 DITELNLPKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCE 96
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEGNVCLNILREDWKPVLTINSI+YGLQYLFLEPNPEDPLNKEAAEVLQNN
Sbjct: 97 TMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCLK 302
RRLFEQNVQ++MRGGYIGS YFERCLK
Sbjct: 157 RRLFEQNVQRSMRGGYIGSTYFERCLK 183
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITK--AELELP 74
MIKLFSLKQQKK+ E+ KKASAAQLRI K EL LP
Sbjct: 1 MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLP 44
>sp|Q9VSF3|UBC12_DROME NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375
PE=2 SV=1
Length = 181
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/147 (80%), Positives = 131/147 (89%)
Query: 155 SDLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKC 214
D+NELNLP TC T+FP+P+DLL+FKLIISPDEGFYR G+FVF+F+VG NYPHEPPKVKC
Sbjct: 33 KDINELNLPNTCATDFPDPNDLLNFKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKC 92
Query: 215 ETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQN 274
T VYHPNIDL+GNVCLNILREDW PVL INSIVYGLQ+LFLEPNPEDPLNKEAA+VLQ
Sbjct: 93 ATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQT 152
Query: 275 NRRLFEQNVQKAMRGGYIGSVYFERCL 301
NRR FE NV+KAMRGG +G YFE CL
Sbjct: 153 NRRQFENNVKKAMRGGCVGETYFECCL 179
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 5/49 (10%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKA--ELELPTYSGS 79
MIKLF+LKQQKKDGE + G+QQKKASAAQLRI K EL LP +
Sbjct: 1 MIKLFTLKQQKKDGE---QKGSQQKKASAAQLRIQKDINELNLPNTCAT 46
>sp|Q9SDY5|RCE1_ARATH NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1
SV=1
Length = 184
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 122/147 (82%), Gaps = 1/147 (0%)
Query: 156 DLNELNLPKTCTTEFPN-PDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKC 214
D++ELNLP +C+ FPN DDL++F++ I PD+G+Y +G FVF+F+V P YPHE PKVKC
Sbjct: 38 DISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKC 97
Query: 215 ETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQN 274
+T VYHPNIDLEGNVCLNILREDWKPVL IN+++YGL +LF EPN EDPLN +AA VL++
Sbjct: 98 KTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRD 157
Query: 275 NRRLFEQNVQKAMRGGYIGSVYFERCL 301
N +LFE NV++AM GGY+G +F RC+
Sbjct: 158 NPKLFETNVRRAMTGGYVGQTFFPRCI 184
>sp|Q9ZU75|UB12L_ARATH Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis
thaliana GN=RCE2 PE=2 SV=1
Length = 185
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 118/147 (80%), Gaps = 1/147 (0%)
Query: 156 DLNELNLPKTCTTEFPN-PDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKC 214
D++ELNLPK+C FPN +DL++F++ I PDEG+Y SG FVFSF+V YPHE PKVKC
Sbjct: 39 DISELNLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKC 98
Query: 215 ETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQN 274
+T VYHPNIDLEGNVCLNILREDWKPVL IN+++YGL +LF EPN EDPLN EAA VL++
Sbjct: 99 KTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRD 158
Query: 275 NRRLFEQNVQKAMRGGYIGSVYFERCL 301
N + FE NV++AM GG +G F RC+
Sbjct: 159 NPKTFEYNVRRAMMGGQVGQTSFPRCM 185
>sp|Q6C9W0|UBC12_YARLI NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=UBC12 PE=3 SV=1
Length = 179
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 114/146 (78%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
DL+EL+LP T T FP+ +D+++F+L + PDEGFY+ G+F FSF V PN+PHEPPKVKC
Sbjct: 32 DLSELSLPSTMKTHFPSAEDIMNFELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCL 91
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
VYHPNIDLEGNVCLNILREDWKPVL++N+++ GLQYLFLEPN DPLNK+AA + N
Sbjct: 92 QKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTAN 151
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCL 301
R F++NV+ +M GG + F+ L
Sbjct: 152 REEFKRNVKHSMAGGSVAGERFDCVL 177
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 7/45 (15%)
Query: 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITK--AELELPT 75
M+K++S+K+++ A G+ +KK +AAQLR+ K +EL LP+
Sbjct: 1 MLKIWSMKEKQ-----AAEGGSAKKKVTAAQLRVQKDLSELSLPS 40
>sp|Q54TI6|UBC12_DICDI NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m
PE=3 SV=1
Length = 230
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 111/146 (76%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D++E+ +P C F + +D+L+F L I+P +G Y+S F F+ + YP++PPKV C+
Sbjct: 85 DIDEMEVPTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCD 144
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
T VYHPNIDLEG+VCLNILR+DW PVL I ++++GL LFLEPNP+DPLNK+AA+++ +N
Sbjct: 145 TLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDN 204
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCL 301
++ FE NV++++RGGYI + F + L
Sbjct: 205 KKTFEANVRQSLRGGYISNRQFPKLL 230
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 103/146 (70%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
D+ +L +P T +T +P+P L L I PDEG+Y+ GKF F ++ NYPH+PPKVKC
Sbjct: 31 DVTDLEIPSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCL 90
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
+YHPNID+EGNVCLNILR+DW PVL +NSI+ GLQ+LFL PN EDPLNKEAA L +
Sbjct: 91 NKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKD 150
Query: 276 RRLFEQNVQKAMRGGYIGSVYFERCL 301
+ F V+ AM+GG + + F+ +
Sbjct: 151 PQGFASRVRTAMKGGLVNGISFDNVM 176
>sp|Q6FVQ8|UBC12_CANGA NEDD8-conjugating enzyme UBC12 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC12 PE=3 SV=1
Length = 187
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 156 DLNELNLPKTCTTEFPNPDDL--LSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVK 213
D+ EL LP T + D+ +S +II PDEGFY+ GKF F+ YP +PPKV
Sbjct: 40 DIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVI 99
Query: 214 CETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQ 273
C ++HPNID G +CLNILREDW P L + IV GL LF EPN DPLNKEAAEVL
Sbjct: 100 CNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLN 159
Query: 274 NNRRLFEQNVQKAMRGGYIGSVYFE 298
++ F V+ AM G +GS Y+E
Sbjct: 160 KDKLEFGNLVRLAMSGAMVGSTYYE 184
>sp|P52491|UBC12_YEAST NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBC12 PE=1 SV=1
Length = 188
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 156 DLNELNLPKTCTTE-FPNPDDLL-----SFKLIISPDEGFYRSGKFVFSFKVGPNYPHEP 209
DL+ L+LP T T +PD ++I+ PDEG+Y G F+ YP EP
Sbjct: 35 DLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEP 94
Query: 210 PKVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAA 269
PKV C ++HPNIDL+GNVCLNILREDW P L + SI+ GL +LFLEPNP DPLNK+AA
Sbjct: 95 PKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAA 154
Query: 270 EVLQNNRRLFEQNVQKAMRGGYIGSVYFE 298
++L + F + V+ M GG I V ++
Sbjct: 155 KLLCEGEKEFAEAVRLTMSGGSIEHVKYD 183
>sp|Q6CSW8|UBC12_KLULA NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=UBC12 PE=3 SV=1
Length = 184
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 81/125 (64%)
Query: 177 LSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILRE 236
+ L I PD G+Y G + F+ + YP EPP VKC +YHPNID++GNVCLN+LRE
Sbjct: 59 MRVNLAIKPDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLRE 118
Query: 237 DWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVY 296
DW P L I SI+ G+ +LF EPN DPLNK+AA+ L + FE V ++RG I V+
Sbjct: 119 DWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFENKVNHSLRGNNIDGVW 178
Query: 297 FERCL 301
+++ +
Sbjct: 179 YDKII 183
>sp|Q75AF2|UBC12_ASHGO NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC12
PE=3 SV=2
Length = 184
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%)
Query: 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215
DL L LP T T + L ISP+EG YR G F FS YP EPP VKC
Sbjct: 38 DLATLELPTTVTLDTKCLGSENKVYLRISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCL 97
Query: 216 TPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275
+YHPNID GN+CLN+LREDW PV+ + ++V GL +LFLEPN DPLN++AA+ + +
Sbjct: 98 NTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRD 157
Query: 276 RRLFEQNVQKAMRGGYIGSVYFE 298
FE NVQ M GG++ F+
Sbjct: 158 PYRFETNVQATMMGGHLDGQVFD 180
>sp|Q9CY34|UB2FA_MOUSE NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1
Length = 185
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F+L +SPDEG+Y+ GKF F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ F V + ++
Sbjct: 165 HLRDKEDFRDKVDEYIK 181
>sp|Q5U203|UBE2F_RAT NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2
SV=2
Length = 185
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F+L +SPDEG+Y+ GKF F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ F V + ++
Sbjct: 165 HLRDKEDFRDKVDEYIK 181
>sp|Q6NY82|UBE2F_DANRE NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1
Length = 185
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 125 GPTYLFGQESGFNVSIRQTQTLFHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLIIS 184
G T ++ VSIR + V + E NLP TC FP+ + L F+L IS
Sbjct: 17 GRTPAGSNDAAHRVSIRDRLLIKEVAEL------EANLPSTCKVTFPDENKLCHFQLAIS 70
Query: 185 PDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILRED------W 238
PDEG+Y GKF F +V Y PPKVKC T ++HPNI G +CL++LRE W
Sbjct: 71 PDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGW 130
Query: 239 KPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQKAMR 288
P T+ +V+GL LF + N +DPLN +AAE ++ F VQ ++
Sbjct: 131 APTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIK 181
>sp|Q3UWQ3|UB2FB_MOUSE NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2
SV=1
Length = 185
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F+L +SPDEG+Y+ G F F +V Y PPKVKC T +
Sbjct: 45 EANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ F V + +R
Sbjct: 165 HLQDKEDFRDKVDEYIR 181
>sp|Q1RMW1|UBE2F_BOVIN NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1
Length = 185
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F+L ++PDEG+Y+ GKF F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ F V+ ++
Sbjct: 165 HLRDKEDFRNKVEDYIK 181
>sp|Q969M7|UBE2F_HUMAN NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1
Length = 185
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F+L ++PDEG+Y+ GKF F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ F V ++
Sbjct: 165 HLRDKEDFRNKVDDYIK 181
>sp|Q5ZKX6|UBE2F_CHICK NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1
Length = 185
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 13/165 (7%)
Query: 131 GQESGFNVSIRQTQTLFHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFY 190
+S VS+R + V + E NLP TC FP+P+ L F+L + PDEG+Y
Sbjct: 23 ASDSTRRVSVRDKLLVKEVAEL------EANLPCTCKVNFPDPNKLHYFQLTVIPDEGYY 76
Query: 191 RSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILRED------WKPVLTI 244
+ GKF F +V Y PPKVKC T ++HPNI G +CL++LRE W P T+
Sbjct: 77 QGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTL 136
Query: 245 NSIVYGLQYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQKAMR 288
+V+GL LF + N +DPLN EAAE ++ F V+ ++
Sbjct: 137 KDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIK 181
>sp|Q6IRC7|UBE2F_XENLA NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1
Length = 185
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F L +SPDE +Y+ G+F F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ + V+ ++
Sbjct: 165 HLRDKDEYRNKVEDYIK 181
>sp|Q5M8Y2|UBE2F_XENTR NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2
SV=1
Length = 185
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 159 ELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218
E NLP TC FP+P+ L F L +SPDE +Y+ G+F F +V Y PPKVKC T +
Sbjct: 45 EANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRI 104
Query: 219 YHPNIDLEGNVCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEV 271
+HPNI G +CL++LRE W P T+ +V+GL LF + N +DPLN EAAE
Sbjct: 105 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH 164
Query: 272 LQNNRRLFEQNVQKAMR 288
++ + V+ ++
Sbjct: 165 HLRDKDEYRNKVEDYIK 181
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 153 FLSDLNEL--NLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEP 209
L +L +L + P C+ P +D+ ++ I+ P E Y G F+ S P+YP +P
Sbjct: 6 ILKELKDLQKDPPSNCSAG-PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64
Query: 210 PKVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAA 269
PKV +T VYHPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 65 PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 270 EVLQNNRRLFEQNVQKAMRGGYIG 293
+ + +R +E + + +G
Sbjct: 125 HMYKTDRSKYESTARSWTQKYAMG 148
>sp|Q9FKT3|UBC30_ARATH Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana GN=UBC30
PE=2 SV=1
Length = 148
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
L DL + P +C+ P DD+ ++ I+ P + + G F+ + P+YP +PPKV
Sbjct: 10 LRDLQR-DPPVSCSAG-PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T VYHPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL E A +
Sbjct: 68 AFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIY 127
Query: 273 QNNRRLFEQNVQKAMRGGYIG 293
+ +R +E Q + +G
Sbjct: 128 KTDRVKYESTAQSWTQKYAMG 148
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
L+DL + + P +C+ P DDL ++ I+ P + Y G F S +YP +PPKV
Sbjct: 10 LADLGK-DPPSSCSAG-PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR+ W P LTI+ ++ + L +PNP+DPL E A V
Sbjct: 68 NFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVY 127
Query: 273 QNNRRLFEQNVQKAMR 288
+ +R +E + ++ R
Sbjct: 128 KTDRSRYELSAREWTR 143
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ I+ P + Y G F+ S P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQKAMRGGYIG 293
+ + +R +E + + +G
Sbjct: 126 MYKTDRAKYETTARSWTQKYAMG 148
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ I+ P E Y G F+ + P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQ 284
+ + +R +E +
Sbjct: 126 MYKTDRAKYEATAR 139
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ ++ P + Y G F+ + P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV +T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQKAMRGGYIG 293
+ + +R +E + + +G
Sbjct: 126 MYKTDRAKYESTARSWTQKYAMG 148
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ I+ P + Y G F+ + P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV T V+HPN++ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQKAMRGGYIG 293
+ + +R +E + + +G
Sbjct: 126 MYKTDRAKYESTARSWTQKYAMG 148
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ I+ P E Y G F+ + P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQKAMRGGYIG 293
+ + ++ +E + + +G
Sbjct: 126 MYKTDKNKYESTARSWTQKYAMG 148
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
Query: 153 FLSDLNEL--NLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEP 209
L +L EL + P +C+ P +D+ ++ I+ P+E Y G F+ + P+YP +P
Sbjct: 6 ILKELKELQRDPPVSCSAG-PTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKP 64
Query: 210 PKVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAA 269
PKV T V+HPNI+ GN+CL+IL++ W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 65 PKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 270 EVLQNNRRLFE 280
+ + ++ +E
Sbjct: 125 HIYKTDKTKYE 135
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 153 FLSDLNELNL-PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPP 210
L +L +L P T + P +D+ ++ I+ P + Y G F+ + P+YP +PP
Sbjct: 6 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPP 65
Query: 211 KVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAE 270
KV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A
Sbjct: 66 KVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 125
Query: 271 VLQNNRRLFEQNVQKAMRGGYIG 293
+ + ++ +E + + +G
Sbjct: 126 MYKTDKNKYESTARTWTQKYAMG 148
>sp|P43102|UBC4_CANAX Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2
SV=1
Length = 147
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P +C+ P DDL ++ I+ P + Y G F S +YP +PPK+
Sbjct: 10 LSDLGR-DPPSSCSAG-PVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKI 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ GN+CL+IL++ W P LTI+ ++ + L + NP+DPL E A +
Sbjct: 68 ALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIY 127
Query: 273 QNNRRLFEQNVQKAMR 288
+ +R+ +E ++ +
Sbjct: 128 KQDRKKYEATAKEWTK 143
>sp|Q9XVK5|UBC12_CAEEL NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12
PE=2 SV=1
Length = 180
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 169 EFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGN 228
E P+ L +L ++P EG YR GKF F V P Y + PP VKC T V+HPNI+ +G+
Sbjct: 51 EVPSTSCLHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGS 110
Query: 229 VCLNILRED------WKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQ 281
+CL+ILR++ W+P + +V+GL LF + + D LN +AA++ NR F
Sbjct: 111 ICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNH 170
Query: 282 NVQK 285
V++
Sbjct: 171 RVRE 174
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Query: 163 PKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221
P + P D++L+++ II P E + G F S + YP++PP VK + ++HP
Sbjct: 20 PPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHP 79
Query: 222 NIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 281
N+ +G++CL+IL+ W P + +I+ +Q L EPNP P N AA++ Q NRR +E+
Sbjct: 80 NVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEK 139
Query: 282 NVQKAMRGGYI 292
VQ+ + ++
Sbjct: 140 RVQQIVEQSWL 150
>sp|Q9UVR2|UBC1_MAGO7 Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=UBC1 PE=3
SV=2
Length = 147
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
L+DL + P +C+ P +DL ++ I+ P + Y G F + +YP +PPKV
Sbjct: 10 LTDLGR-DPPSSCSAG-PVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR+ W P LTI+ ++ + + +PNP+DPL E A V
Sbjct: 68 NFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVY 127
Query: 273 QNNRRLFEQNVQKAMR 288
+ R +E ++ R
Sbjct: 128 KTARAQYESTAREWTR 143
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 163 PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221
P T + P +D+ ++ I+ P + Y G F+ + P+YP +PPKV T V+HP
Sbjct: 17 PPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76
Query: 222 NIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 281
NI+ G++CL+IL++ W P LTI+ ++ + L +PNP+DPL E A + + +R +E
Sbjct: 77 NINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYEN 136
Query: 282 NVQ 284
+
Sbjct: 137 TAR 139
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL E + P +C+ P DDL ++ I+ P + Y G F S +YP +PPK+
Sbjct: 11 LSDL-ERDPPTSCSAG-PVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKI 68
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ GN+CL+IL++ W P LT++ ++ + L + NP+DPL E A +
Sbjct: 69 SFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIY 128
Query: 273 QNNRRLFEQNVQK 285
+ +R +E ++
Sbjct: 129 KTDRPKYEATARE 141
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
L DL + P C+ P DDL ++ I+ P E Y+ G F + +YP +PPKV
Sbjct: 10 LQDLGR-DPPAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + Q
Sbjct: 128 KTDRERYNQ 136
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P +C+ P DDL ++ I+ P + Y G F S +YP +PPKV
Sbjct: 11 LSDLGR-DPPASCSAG-PVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKV 68
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ GN+CL+IL++ W P LT++ ++ + L + NP+DPL E A++
Sbjct: 69 NFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIY 128
Query: 273 QNNRRLFEQNVQKAMR 288
+ ++ +E ++ +
Sbjct: 129 KTDKAKYEATAKEWTK 144
>sp|O74196|UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum
gloeosporioides GN=UBC1 PE=2 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
L+DL + P +C+ P +DL ++ I+ P + Y G F + +YP +PPKV
Sbjct: 10 LTDLGR-DPPSSCSAG-PVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR+ W P LTI+ ++ + + +PNP++PL E A V
Sbjct: 68 NFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVY 127
Query: 273 QNNRRLFEQNVQKAMR 288
+ +R +E ++ R
Sbjct: 128 KTDRARYEATAREWTR 143
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P C+ P DD+ ++ I+ P++ Y+ G F + +YP +PPKV
Sbjct: 10 LSDLAR-DPPAQCSAG-PVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + +
Sbjct: 128 KTDRDKYNR 136
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P C+ P DD+ ++ I+ P++ Y+ G F + +YP +PPKV
Sbjct: 10 LSDLAR-DPPAQCSAG-PVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + +
Sbjct: 128 KTDRDKYNR 136
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P C+ P DD+ ++ I+ P++ Y+ G F + +YP +PPKV
Sbjct: 10 LSDLAR-DPPAQCSAG-PVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + +
Sbjct: 128 KTDRDKYNR 136
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P C+ P DD+ ++ I+ P++ Y+ G F + +YP +PPKV
Sbjct: 10 LSDLAR-DPPAQCSAG-PVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + +
Sbjct: 128 KTDRDKYNR 136
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 154 LSDLNELNLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
LSDL + P C+ P DD+ ++ I+ P++ Y+ G F + +YP +PPKV
Sbjct: 10 LSDLAR-DPPAQCSAG-PVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
T +YHPNI+ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A +
Sbjct: 68 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 127
Query: 273 QNNRRLFEQ 281
+ +R + +
Sbjct: 128 KTDRDKYNR 136
>sp|Q9C9Y7|UBC12_ARATH Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana
GN=UBC12 PE=2 SV=1
Length = 149
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 163 PKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221
P C+ +D+ ++ I+ P + Y G F S +YP +PPKV +T VYHP
Sbjct: 18 PANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHP 77
Query: 222 NIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 281
NID +G++CL+IL+E W P T + ++ + L +PNP DPL E A + + ++ +E
Sbjct: 78 NIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYES 137
Query: 282 NVQKAMRGGYIG 293
QK + +G
Sbjct: 138 TAQKWTQKYAMG 149
>sp|P70711|U2D2B_RAT Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b
PE=1 SV=1
Length = 147
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Query: 156 DLNEL--NLPKTCTTEFPNPDDLLSFKL-IISPDEGFYRSGKFVFSFKVGPNYPHEPPKV 212
+LN+L + P C+ P +D+ ++ I+ P++ Y+ G F + YP +PPKV
Sbjct: 9 ELNDLAQDPPAQCSAG-PVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKV 67
Query: 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272
+ T +YHPN++ G++CL+ILR W P LTI+ ++ + L +PNP+DPL E A++
Sbjct: 68 EFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIY 127
Query: 273 QNNRRLFEQNVQK 285
+ +R + + ++
Sbjct: 128 KTDRDKYNRTARE 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,813,079
Number of Sequences: 539616
Number of extensions: 5332614
Number of successful extensions: 10286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 9850
Number of HSP's gapped (non-prelim): 314
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)