Query psy16981
Match_columns 302
No_of_seqs 267 out of 1468
Neff 5.5
Searched_HMMs 46136
Date Fri Aug 16 18:39:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16981.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16981hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0420|consensus 100.0 4.2E-54 9.1E-59 372.4 12.7 181 33-301 1-184 (184)
2 KOG0417|consensus 100.0 1.4E-45 3.1E-50 313.8 13.7 143 150-293 3-148 (148)
3 COG5078 Ubiquitin-protein liga 100.0 4E-45 8.8E-50 315.5 15.8 143 149-292 6-152 (153)
4 PTZ00390 ubiquitin-conjugating 100.0 5E-42 1.1E-46 296.4 16.4 145 149-294 3-150 (152)
5 PLN00172 ubiquitin conjugating 100.0 2.6E-41 5.6E-46 290.3 16.4 141 150-291 3-146 (147)
6 KOG0419|consensus 100.0 6.3E-41 1.4E-45 279.6 14.2 144 148-292 4-150 (152)
7 KOG0425|consensus 100.0 8.3E-38 1.8E-42 267.5 14.9 143 149-291 6-164 (171)
8 PF00179 UQ_con: Ubiquitin-con 100.0 2.3E-37 5.1E-42 261.5 13.5 135 152-287 1-140 (140)
9 cd00195 UBCc Ubiquitin-conjuga 100.0 3.3E-36 7.1E-41 255.0 14.5 136 151-287 2-141 (141)
10 KOG0426|consensus 100.0 4.2E-36 9E-41 251.0 13.8 144 147-290 3-162 (165)
11 KOG0421|consensus 100.0 3.8E-36 8.3E-41 254.3 11.6 140 148-289 29-171 (175)
12 smart00212 UBCc Ubiquitin-conj 100.0 2.1E-35 4.6E-40 251.2 16.2 139 151-290 1-144 (145)
13 KOG0418|consensus 100.0 3.9E-35 8.5E-40 257.5 12.5 142 149-291 4-152 (200)
14 KOG0424|consensus 100.0 2.2E-34 4.7E-39 243.4 14.6 141 150-291 6-156 (158)
15 KOG0422|consensus 100.0 1.6E-32 3.5E-37 231.0 13.2 146 149-294 3-151 (153)
16 KOG0416|consensus 100.0 6.4E-31 1.4E-35 227.9 10.1 141 151-294 6-150 (189)
17 KOG0423|consensus 100.0 2.7E-29 5.8E-34 218.4 7.4 141 147-288 9-152 (223)
18 KOG0427|consensus 99.9 2.6E-24 5.6E-29 180.0 11.4 121 143-265 10-135 (161)
19 KOG0894|consensus 99.9 3.4E-21 7.4E-26 172.9 11.6 110 146-259 3-119 (244)
20 KOG0429|consensus 99.8 8E-20 1.7E-24 164.6 12.4 138 153-291 24-169 (258)
21 KOG0428|consensus 99.7 7E-18 1.5E-22 154.3 9.6 111 147-259 10-125 (314)
22 KOG0895|consensus 99.6 8.6E-16 1.9E-20 162.3 6.0 109 148-257 851-971 (1101)
23 KOG0895|consensus 99.4 3.7E-13 8E-18 142.7 11.2 126 132-258 266-405 (1101)
24 KOG0896|consensus 99.2 5.2E-11 1.1E-15 100.5 8.2 94 163-256 23-122 (138)
25 PF14461 Prok-E2_B: Prokaryoti 98.2 3.8E-06 8.3E-11 71.0 7.5 67 191-257 34-106 (133)
26 KOG0897|consensus 98.0 4E-06 8.7E-11 69.4 2.9 91 195-290 13-113 (122)
27 PF05743 UEV: UEV domain; Int 97.9 2.2E-05 4.7E-10 65.8 5.5 104 149-257 4-117 (121)
28 KOG0420|consensus 97.8 1.2E-05 2.7E-10 70.8 2.1 28 79-106 63-90 (184)
29 KOG2391|consensus 96.5 0.0089 1.9E-07 58.1 7.4 95 162-260 36-140 (365)
30 smart00591 RWD domain in RING 91.9 0.92 2E-05 35.5 7.5 39 178-216 24-64 (107)
31 PF14462 Prok-E2_E: Prokaryoti 91.8 1 2.2E-05 38.1 7.9 79 176-256 23-120 (122)
32 PF08694 UFC1: Ubiquitin-fold 91.4 0.21 4.6E-06 43.3 3.5 54 195-248 77-135 (161)
33 PF05773 RWD: RWD domain; Int 90.5 0.53 1.1E-05 37.1 4.8 44 174-217 27-73 (113)
34 PF14457 Prok-E2_A: Prokaryoti 88.9 0.63 1.4E-05 41.0 4.4 62 196-257 56-126 (162)
35 KOG3357|consensus 63.9 10 0.00022 32.7 3.8 81 148-233 27-119 (167)
36 KOG4018|consensus 48.8 24 0.00053 32.6 4.0 37 176-213 30-69 (215)
37 PTZ00390 ubiquitin-conjugating 45.8 8.7 0.00019 33.2 0.7 29 79-107 35-64 (152)
38 PLN00172 ubiquitin conjugating 41.0 11 0.00023 32.5 0.5 29 79-107 34-63 (147)
39 PF09765 WD-3: WD-repeat regio 36.2 38 0.00082 32.6 3.4 88 147-255 98-186 (291)
40 PF14460 Prok-E2_D: Prokaryoti 35.6 49 0.0011 29.2 3.8 46 216-264 90-138 (175)
41 PF06113 BRE: Brain and reprod 35.6 83 0.0018 31.0 5.7 67 175-252 52-121 (333)
42 TIGR03737 PRTRC_B PRTRC system 35.4 55 0.0012 30.6 4.2 40 216-259 131-174 (228)
43 PF06113 BRE: Brain and reprod 34.1 43 0.00093 33.0 3.4 25 195-220 308-332 (333)
44 cd00421 intradiol_dioxygenase 31.3 58 0.0013 27.8 3.5 25 191-215 64-89 (146)
45 cd03457 intradiol_dioxygenase_ 30.9 57 0.0012 29.4 3.5 26 191-216 85-110 (188)
46 KOG0427|consensus 29.5 28 0.0006 30.1 1.1 51 60-110 14-80 (161)
47 smart00212 UBCc Ubiquitin-conj 22.4 45 0.00097 28.0 1.2 26 83-108 37-62 (145)
48 cd03459 3,4-PCD Protocatechuat 21.6 1.1E+02 0.0024 26.7 3.5 25 192-216 72-101 (158)
No 1
>KOG0420|consensus
Probab=100.00 E-value=4.2e-54 Score=372.35 Aligned_cols=181 Identities=66% Similarity=1.169 Sum_probs=171.5
Q ss_pred HHhhhhhccccccCCCCCCCCCcccccchhhhhhhhccccCCCCCCccccccceecccCCcccccccccccccCCcccch
Q psy16981 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKAELELPTYSGSVLLHQGVLLYKGPTYLFGQESGFNQTNTNLISW 112 (302)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~n~~~i~~ 112 (302)
|||||++|+++++++..... +.++++|||+||+++
T Consensus 1 M~~L~~~~~k~~~~~~~~~~-~~~~~~s~a~lrl~~-------------------------------------------- 35 (184)
T KOG0420|consen 1 MIKLFKLKKKKREEEQSRYT-STRKKVSAALLRLKK-------------------------------------------- 35 (184)
T ss_pred CccHHHHHHhhhhhcccccc-cccccccHHHHHHHh--------------------------------------------
Confidence 89999999888766654433 788999999999999
Q ss_pred hhhhhhccccccCCceeccCCccceeccccccchHHHHHHHHHHHhccCCCCCeEEeccC-CCCceE--EEEEEeCCCcc
Q psy16981 113 SVLLHQGVLLYKGPTYLFGQESGFNVSIRQTQTLFHVCCVFLSDLNELNLPKTCTTEFPN-PDDLLS--FKLIISPDEGF 189 (302)
Q Consensus 113 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Rl~kEL~eL~lP~~~~~~~p~-~ddl~~--W~v~IgP~~tp 189 (302)
|+.+|++|++|...+|+ .+++.. ++++|.|++|.
T Consensus 36 -------------------------------------------di~elnLp~t~~~s~~~~~~d~~~~~~elti~PdEGy 72 (184)
T KOG0420|consen 36 -------------------------------------------DILELNLPPTCSLSFPDSPDDLNNLEFELTITPDEGY 72 (184)
T ss_pred -------------------------------------------hhhhccCCCccccccccCCcccccceEEEEEccCcce
Confidence 99999999999988887 667666 99999999999
Q ss_pred cCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHH
Q psy16981 190 YRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAA 269 (302)
Q Consensus 190 YeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA 269 (302)
|+||.|.|.+.+|+.||++||+|+|+|+|||||||.+|+|||+|||++|+|+++|.+|+.+|++||.+|+++||||.|||
T Consensus 73 Y~gGkf~F~~~v~~~Yp~~PPKVkCltkV~HPNId~~GnVCLnILRedW~P~lnL~sIi~GL~~LF~epn~eDpLN~eAA 152 (184)
T KOG0420|consen 73 YQGGKFRFKFKVPNAYPHEPPKVKCLTKVYHPNIDLDGNVCLNILREDWRPVLNLNSIIYGLQFLFLEPNPEDPLNKEAA 152 (184)
T ss_pred ecCceEEEEEECCCCCCCCCCeeeeeeccccCCcCCcchHHHHHHHhcCccccchHHHHHHHHHHhccCCCcccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCHHHHHHHHHHHHHccCCCCccccccc
Q psy16981 270 EVLQNNRRLFEQNVQKAMRGGYIGSVYFERCL 301 (302)
Q Consensus 270 ~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~~~ 301 (302)
+++++|++.|+.+||++|.||+|+++.||+||
T Consensus 153 ~~l~~n~e~F~~~Vr~~m~gg~v~~~~f~~~~ 184 (184)
T KOG0420|consen 153 AVLKSNREGFENNVRRAMSGGCVGQTSFDRCM 184 (184)
T ss_pred HHHHhCHHHHHHHHHHHHhcCccCceeccccC
Confidence 99999999999999999999999999999997
No 2
>KOG0417|consensus
Probab=100.00 E-value=1.4e-45 Score=313.76 Aligned_cols=143 Identities=34% Similarity=0.715 Sum_probs=136.6
Q ss_pred HHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 150 CCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 150 ~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
.+||.||+++| ++|++|.. .|+++|+++|+++| ||.+||||||+|++.|.||++||++||+|+|.|+||||||+..
T Consensus 3 ~~RI~kE~~~l~~dp~~~~~~-~~~~dnl~~w~a~I~GP~~SpYEgG~F~l~I~~p~~YP~~PPkV~F~TkIyHPNI~~~ 81 (148)
T KOG0417|consen 3 SKRIIKELQDLLRDPPPGCSA-GPVGDNLFHWQATILGPPGSPYEGGVFFLEIHFPEDYPFKPPKVRFLTKIYHPNIDSN 81 (148)
T ss_pred HHHHHHHHHHHhcCCCCCCcc-CCCCCceeeEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCceEeecccccCCcCcc
Confidence 34999999988 67899975 58899999999999 9999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 227 GNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 227 G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
|+||+|||++.|+|+++|.+||++|++||.+||++||++.++|.+|+.|+.+|++.||+|+++++.+
T Consensus 82 G~IclDILk~~WsPAl~i~~VllsI~sLL~~PnpddPL~~~ia~~~k~d~~~~~~~ARewt~kyA~~ 148 (148)
T KOG0417|consen 82 GRICLDILKDQWSPALTISKVLLSICSLLSDPNPDDPLVPDIAELYKTDRAKYERTAREWTRKYAMG 148 (148)
T ss_pred ccchHHhhhccCChhhHHHHHHHHHHHHhcCCCCCccccHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999988653
No 3
>COG5078 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-45 Score=315.54 Aligned_cols=143 Identities=35% Similarity=0.702 Sum_probs=135.3
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCC-CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPD-DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~d-dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
+.+||++|++.| ++|.++. +.|.++ |+++|+++| ||++||||||+|++.|.||++||++||+|+|.|+|||||||
T Consensus 6 a~~RL~kE~~~l~~~~~~~~~-a~p~~d~~l~~w~~~i~GP~dtpYegg~f~~~l~fP~~YP~~PPkv~F~t~i~HPNV~ 84 (153)
T COG5078 6 ALKRLLKELKKLQKDPPPGIS-AGPVDDDNLFHWEATITGPPDTPYEGGIFKLTLEFPEDYPFKPPKVRFTTKIFHPNVD 84 (153)
T ss_pred HHHHHHHHHHHHhcCCCCceE-EEECCCCcceeEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeeccCCcCCCcC
Confidence 789999999999 4567776 456655 999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCC
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYI 292 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v 292 (302)
.+|+||||||+++|+|+++|.+||++|++||.+||+++|+|.|||++|++|+++|.++||++++++.+
T Consensus 85 ~~G~vCLdIL~~~WsP~~~l~sILlsl~slL~~PN~~~Pln~daa~~~~~d~~~y~~~vr~~~~~~~~ 152 (153)
T COG5078 85 PSGNVCLDILKDRWSPVYTLETILLSLQSLLLSPNPDSPLNTEAATLYREDKEEYEKKVREWVKKYAE 152 (153)
T ss_pred CCCCChhHHHhCCCCccccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998764
No 4
>PTZ00390 ubiquitin-conjugating enzyme; Provisional
Probab=100.00 E-value=5e-42 Score=296.41 Aligned_cols=145 Identities=31% Similarity=0.609 Sum_probs=137.7
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
..+||++|+++| +++.++. +.|.++|+++|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 3 ~~kRl~~E~~~l~~~~~~~i~-~~~~~~d~~~w~~~i~GP~~tpY~gg~f~~~i~~p~~YP~~pP~v~F~t~i~HPNV~~ 81 (152)
T PTZ00390 3 ISKRIEKETQNLANDPPPGIK-AEPDPGNYRHFKILMEGPDGTPYEGGYYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK 81 (152)
T ss_pred HHHHHHHHHHHHHhCCCCCeE-EEECCCCccEEEEEEEcCCCCCCcCcEEEEEEECccccCCCCCEEEEecCCeeceECC
Confidence 568999999999 4677776 678889999999999 999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 226 EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 226 ~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
+|.||+++|+++|+|++||.+||++|++||.+|++++|+|.+||++|++|+++|+++|++++++++.++
T Consensus 82 ~G~iCl~iL~~~W~p~~ti~~iL~~i~~ll~~P~~~~pln~~aa~~~~~d~~~f~~~a~~~~~~~a~~~ 150 (152)
T PTZ00390 82 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLDTSVADHFKNNRADAEKVAREWNQKYAKHN 150 (152)
T ss_pred CCeEECccCcccCCCCCcHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHCHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999887654
No 5
>PLN00172 ubiquitin conjugating enzyme; Provisional
Probab=100.00 E-value=2.6e-41 Score=290.35 Aligned_cols=141 Identities=33% Similarity=0.714 Sum_probs=133.8
Q ss_pred HHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 150 CCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 150 ~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
.+||++|+++| +++.++. +.|+++|+++|+++| ||++|||+||.|+|.|.||++||++||+|+|.|+||||||+.+
T Consensus 3 ~~Rl~kE~~~l~~~~~~~~~-~~~~~~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPNv~~~ 81 (147)
T PLN00172 3 TKRIQKEHKDLLKDPPSNCS-AGPSDENLFRWTASIIGPSDSPYAGGVFFLSILFPPDYPFKPPKVQFTTKIYHPNINSN 81 (147)
T ss_pred HHHHHHHHHHHHhCCCCCeE-EEECCCChheEEEEEECCCCCCCCCCEEEEEEECCcccCCCCCEEEEecCcccceECCC
Confidence 57999999999 4677775 568889999999998 9999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 227 GNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 227 G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|.||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|+++|++++++++
T Consensus 82 G~iCl~il~~~W~p~~ti~~il~~i~~ll~~P~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a 146 (147)
T PLN00172 82 GSICLDILRDQWSPALTVSKVLLSISSLLTDPNPDDPLVPEIARVFKENRSRYEATAREWTQRYA 146 (147)
T ss_pred CEEEcccCcCCCCCcCcHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999998754
No 6
>KOG0419|consensus
Probab=100.00 E-value=6.3e-41 Score=279.59 Aligned_cols=144 Identities=27% Similarity=0.660 Sum_probs=136.8
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++|+++| ++|.|++ +-|.++|++.|.++| ||.+|||+||+|++.|.|+++||.+||.|+|.++.||||||
T Consensus 4 pArrrLmrDfkrlqedpp~gis-a~P~~~niM~W~a~I~Gp~~tp~e~gtFkLtl~FteeYpnkPP~VrFvs~mFHPNvy 82 (152)
T KOG0419|consen 4 PARRRLMRDFKRLQEDPPAGIS-AAPVENNIMEWNAVIFGPQDTPFEGGTFKLTLEFTEEYPNKPPTVRFVSKMFHPNVY 82 (152)
T ss_pred hHHHHHHHHHHHhhcCCCCCcc-CCCCccceeeeeeeEEcCCCCCcCCceEEEEEEcccccCCCCCeeEeeeeccCCCcC
Confidence 4678999999999 4677775 689999999999988 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCC
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYI 292 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v 292 (302)
.+|.+|||||...|+|.+++.+||.+||+||.+||+++|+|.|||.+|++|+++|.++|++.+.++-+
T Consensus 83 a~G~iClDiLqNrWsp~Ydva~ILtsiQslL~dPn~~sPaN~eAA~Lf~e~~rey~rrVk~~veqsw~ 150 (152)
T KOG0419|consen 83 ADGSICLDILQNRWSPTYDVASILTSIQSLLNDPNPNSPANSEAARLFSENKREYERRVKETVEQSWS 150 (152)
T ss_pred CCCcchHHHHhcCCCCchhHHHHHHHHHHHhcCCCCCCcccHHHHHHHhhChHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999887654
No 7
>KOG0425|consensus
Probab=100.00 E-value=8.3e-38 Score=267.47 Aligned_cols=143 Identities=27% Similarity=0.591 Sum_probs=130.5
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
+..-|.++|++| ++..+......++.|++.|.+.| ||++|+|+||.|+-.+.||.+||.+||+++|.+++||||||+
T Consensus 6 a~~ll~~qlk~L~~~pv~gf~~glvd~~dif~WeV~i~gppdTlYeGG~FkA~m~FP~dYP~sPP~~rF~s~mwHPNvy~ 85 (171)
T KOG0425|consen 6 ASLLLLKQLKELQEEPVEGFSVGLVDDSDIFEWEVAIIGPPDTLYEGGFFKAHMKFPQDYPLSPPTFRFTSKMWHPNVYE 85 (171)
T ss_pred hHHHHHHHHHHHhcCCCCccccccccCCceeEEEEEEEcCCCccccCceeEEEEeCcccCCCCCCceeeehhhcCCCcCC
Confidence 334456677777 35567776777888999999988 999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 226 EGNVCLNILR-------------EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 226 ~G~VCL~iL~-------------e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
+|+||++||. |.|.|+.|+++||++|.+||.+||.++|+|-+||..|++|+++|.++|+++++++.
T Consensus 86 ~G~vCISILH~pgdD~~gyE~~~erW~Pv~tvetIllSiIsmL~~PN~~SPANVDAa~~~Ren~~EykkkV~r~vr~s~ 164 (171)
T KOG0425|consen 86 DGDVCISILHPPGDDPSGYELPSERWLPVQTVETILLSIISMLNSPNDESPANVDAAKEWRENPEEYKKKVRRCVRRSQ 164 (171)
T ss_pred CCCEEEEeecCCCCCcccCCChhhccCCccchhHhHHHHHHHHcCCCCCCccchHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 9999999996 46999999999999999999999999999999999999999999999999998764
No 8
>PF00179 UQ_con: Ubiquitin-conjugating enzyme; InterPro: IPR000608 The post-translational attachment of ubiquitin (IPR000626 from INTERPRO) to proteins (ubiquitinylation) alters the function, location or trafficking of a protein, or targets it to the 26S proteasome for degradation [, , ]. Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade []. The E1 enzyme mediates an ATP-dependent transfer of a thioester-linked ubiquitin molecule to a cysteine residue on the E2 enzyme. The E2 enzyme (6.3.2.19 from EC) then either transfers the ubiquitin moiety directly to a substrate, or to an E3 ligase, which can also ubiquitinylate a substrate. There are several different E2 enzymes (over 30 in humans), which are broadly grouped into four classes, all of which have a core catalytic domain (containing the active site cysteine), and some of which have short N- and C-terminal amino acid extensions: class I enzymes consist of just the catalytic core domain (UBC), class II possess a UBC and a C-terminal extension, class III possess a UBC and an N-terminal extension, and class IV possess a UBC and both N- and C-terminal extensions. These extensions appear to be important for some subfamily function, including E2 localisation and protein-protein interactions []. In addition, there are proteins with an E2-like fold that are devoid of catalytic activity, but which appear to assist in poly-ubiquitin chain formation.; GO: 0016881 acid-amino acid ligase activity; PDB: 2AAK_A 3SY2_C 1FBV_C 3SQV_C 1C4Z_D 1JAT_B 2GMI_B 2H2Y_D 2R0J_A 3E95_B ....
Probab=100.00 E-value=2.3e-37 Score=261.52 Aligned_cols=135 Identities=43% Similarity=0.807 Sum_probs=121.3
Q ss_pred HHHHHHhcc--CCCCCeEEeccCCC-CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCC
Q psy16981 152 VFLSDLNEL--NLPKTCTTEFPNPD-DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEG 227 (302)
Q Consensus 152 Rl~kEL~eL--~lP~~~~~~~p~~d-dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G 227 (302)
||++|+++| +.+.++.. .+.++ |+++|+++| ||++|||+||.|+|.|.||++||++||+|+|.|+||||||+.+|
T Consensus 1 Rl~~E~~~l~~~~~~~~~~-~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~YP~~pP~v~f~t~i~HPni~~~G 79 (140)
T PF00179_consen 1 RLQKELKELQKNPPPGISV-QPSEDDNLFEWHVTIFGPPGTPYEGGIFKFRISFPPDYPFSPPKVRFLTPIFHPNIDENG 79 (140)
T ss_dssp HHHHHHHHHHHSHTTTEEE-EEESTTETTEEEEEEEBETTSTTTTSEEEEEEEETTTTTTS--EEEESSS-SBTTB-TTS
T ss_pred CHHHHHHHHhhCCCCCEEE-EECCCCChheEEEEEeccCccceecccccccccccccccccccccccccccccccccccc
Confidence 789999999 57888875 45544 999999999 89999999999999999999999999999999999999999999
Q ss_pred cEEeccCCC-CCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q psy16981 228 NVCLNILRE-DWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAM 287 (302)
Q Consensus 228 ~VCL~iL~e-~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~ 287 (302)
.||+++|.. .|+|+++|.+||.+|++||.+|+.++|+|.+||++|++|+++|+++||+|.
T Consensus 80 ~icl~~l~~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~ 140 (140)
T PF00179_consen 80 RICLDILNPESWSPSYTIESILLSIQSLLSEPNPEDPLNEEAAELYKNDREEFEKKAREWA 140 (140)
T ss_dssp BBGHGGGTTTTC-TTSHHHHHHHHHHHHHHSTCTTSTSSHHHHHHHHHCHHHHHHHHHHH-
T ss_pred cchhhhhhcccCCcccccccHHHHHHHHHhCCCCCCcchHHHHHHHHHCHHHHHHHHHHcC
Confidence 999999985 599999999999999999999999999999999999999999999999973
No 9
>cd00195 UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin protein ligase enzymes, E3. This pathway regulates many fundamental cellular processes. There are also other E2s which form thiol-ester linkages without the use of E3s as well as several UBC homologs (TSG101, Mms2, Croc-1 and similar proteins) which lack the active site cysteine essential for ubiquitination and appear to function in DNA repair pathways which were omitted from the scope of this CD.
Probab=100.00 E-value=3.3e-36 Score=255.03 Aligned_cols=136 Identities=35% Similarity=0.707 Sum_probs=128.1
Q ss_pred HHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCC
Q psy16981 151 CVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEG 227 (302)
Q Consensus 151 ~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G 227 (302)
+||++|++++ +.+.++. +.|+++|+++|+++| ||++|+|+||.|+|.|.||++||++||+|+|.+++|||||+.+|
T Consensus 2 ~Rl~~E~~~l~~~~~~~~~-v~~~~~~~~~w~~~i~g~~~t~y~g~~~~~~~~~p~~yP~~pP~v~f~~~i~HpnV~~~G 80 (141)
T cd00195 2 KRLQKELKDLKKDPPSGIS-AEPVEENLLEWHGTIRGPPDTPYEGGIFKLDIEFPEDYPFKPPKVRFVTKIYHPNVDENG 80 (141)
T ss_pred chHHHHHHHHHhCCCCCeE-EEECCCChhEEEEEEecCCCCCccCCEEEEEEECCCccCCCCCeEEEeCCcccCCCCCCC
Confidence 6899999998 3566774 578888999999999 88899999999999999999999999999999999999999999
Q ss_pred cEEeccCCCC-CCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q psy16981 228 NVCLNILRED-WKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAM 287 (302)
Q Consensus 228 ~VCL~iL~e~-W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~ 287 (302)
.||+++|..+ |+|+++|.+||.+|+++|.+|+.++|+|.+||.+|++|+++|.++|++++
T Consensus 81 ~icl~~l~~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~ 141 (141)
T cd00195 81 KICLSILKTHGWSPAYTLRTVLLSLQSLLNEPNPSDPLNAEAAKLYKENREEFKKKAREWT 141 (141)
T ss_pred CCchhhcCCCCcCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHhC
Confidence 9999999977 99999999999999999999999999999999999999999999999874
No 10
>KOG0426|consensus
Probab=100.00 E-value=4.2e-36 Score=250.99 Aligned_cols=144 Identities=26% Similarity=0.553 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+++||++|+++| +.|.|+...--++||++.|.+.| ||++|+|+||+|.-++.||.+||.+||+++|...+|||||
T Consensus 3 ~~AlkRLm~EykqLt~~~P~GIvAgP~~EdnfF~W~cLI~GP~~T~f~~GvfpA~l~FP~DYPLsPPkm~Ftc~~fHPNi 82 (165)
T KOG0426|consen 3 GTALKRLMAEYKQLTLNPPEGIVAGPINEDNFFEWECLIQGPEDTCFEGGVFPARLSFPLDYPLSPPKMRFTCEMFHPNI 82 (165)
T ss_pred hhHHHHHHHHHHHHccCCCCcceeCCCCccceeeeeeeeeCCCCCcccCCccceeeecCCCCCCCCCceeeecccccCcc
Confidence 36889999999999 67888876555699999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHcc
Q psy16981 224 DLEGNVCLNILR-------------EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGG 290 (302)
Q Consensus 224 d~~G~VCL~iL~-------------e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~ 290 (302)
+.+|+||++||. |.|+|+.+++.||+++.+||.+||.++.+|.+|+.++++||++|++.|+..+++.
T Consensus 83 y~dG~VCISILHaPGDDP~~YEls~ERWSPVQSvEKILLSV~SMLaEPNdESgANvdA~~mWRe~R~ef~~i~~~lvrKt 162 (165)
T KOG0426|consen 83 YPDGRVCISILHAPGDDPMGYELSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDACKMWREDREEFEKIAKRLVRKT 162 (165)
T ss_pred cCCCeEEEEEeeCCCCCCccchhhhhcCChHHHHHHHHHHHHHHHcCCCcccCcccHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999999999996 5799999999999999999999999999999999999999999999999998764
No 11
>KOG0421|consensus
Probab=100.00 E-value=3.8e-36 Score=254.26 Aligned_cols=140 Identities=34% Similarity=0.649 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
...+||+.||..| .-.++++ +||++||++.|.++| ||.+|+|+|-.|++.+.||.+||+.||+|+|+|++||||||
T Consensus 29 ~V~KRLq~ELm~Lmms~~~gIS-AFP~~dnlf~WvGtItGp~dTvyegl~yklSl~Fp~~YPy~pP~vkFltpc~HPNVD 107 (175)
T KOG0421|consen 29 SVTKRLQSELMGLMMSNTPGIS-AFPESDNLFKWVGTITGPKDTVYEGLKYKLSLSFPNNYPYKPPTVKFLTPCFHPNVD 107 (175)
T ss_pred hHHHHHHHHHHHHHhcCCCCcc-cCcCcCceeEEeeEeeCCCCccccCcEEEEEEecCCCCCCCCCeeEeeccccCCCcc
Confidence 4567999999888 5667775 799999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHc
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRG 289 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~ 289 (302)
..|+||||||.+.|+..+++++||++||+||-+||.++|+|..||+++. |.++|++.+.++.++
T Consensus 108 ~~GnIcLDILkdKWSa~YdVrTILLSiQSLLGEPNn~SPLNaqAAelW~-d~~eykk~l~~~Y~~ 171 (175)
T KOG0421|consen 108 LSGNICLDILKDKWSAVYDVRTILLSIQSLLGEPNNSSPLNAQAAELWS-DQEEYKKYLEALYKE 171 (175)
T ss_pred ccccchHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCcchhHHHHHhc-CHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999998 999999999887653
No 12
>smart00212 UBCc Ubiquitin-conjugating enzyme E2, catalytic domain homologues. Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. This pathway functions in regulating many fundamental processes required for cell viability.TSG101 is one of several UBC homologues that lacks this active site cysteine.
Probab=100.00 E-value=2.1e-35 Score=251.17 Aligned_cols=139 Identities=36% Similarity=0.733 Sum_probs=129.8
Q ss_pred HHHHHHHhcc--CCCCCeEEeccCCC-CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 151 CVFLSDLNEL--NLPKTCTTEFPNPD-DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 151 ~Rl~kEL~eL--~lP~~~~~~~p~~d-dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
+||++|++++ +++.++. +.|.++ |+++|+++| ||++|+|+||.|+|.|.||++||++||+|+|.++++|||||++
T Consensus 1 ~Rl~~E~~~~~~~~~~~~~-v~~~~~~~~~~w~~~i~gp~~~~y~g~~f~~~l~~p~~yP~~pP~v~f~~~i~Hp~i~~~ 79 (145)
T smart00212 1 KRLLKELKELLKDPPPGIS-AYPVDEDNLLEWTGTIVGPPGTPYEGGIFKLTIEFPPDYPFKPPKVKFITKIYHPNVDSS 79 (145)
T ss_pred ChHHHHHHHHHhCCCCCeE-EEECCCCChheEEEEEEcCCCCCcCCcEEEEEEECCcccCCCCCEEEEeCCceEeeECCC
Confidence 4788999998 4566665 466654 999999988 8999999999999999999999999999999999999999999
Q ss_pred CcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHcc
Q psy16981 227 GNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGG 290 (302)
Q Consensus 227 G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~ 290 (302)
|.||+++|. ++|+|+++|.+||.+|+++|.+|+.++|+|.|||.+|++|++.|+++|++++.++
T Consensus 80 G~icl~~l~~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~eaa~~~~~~~~~f~~~~~~~~~k~ 144 (145)
T smart00212 80 GEICLDILKQEKWSPATTLETVLLSIQSLLSEPNPDSPLNADAATLYKKNREEFKKKAREWTKKY 144 (145)
T ss_pred CCEehhhcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999998 8999999999999999999999999999999999999999999999999999876
No 13
>KOG0418|consensus
Probab=100.00 E-value=3.9e-35 Score=257.52 Aligned_cols=142 Identities=29% Similarity=0.505 Sum_probs=130.1
Q ss_pred HHHHHHHHHhcc-CCC----CCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q psy16981 149 VCCVFLSDLNEL-NLP----KTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPN 222 (302)
Q Consensus 149 ~~~Rl~kEL~eL-~lP----~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPN 222 (302)
+.+|+++|++++ +.+ .++. +...++|+.+.++.| ||++||||||+|.++|.+|++|||+||+|+|.|+|||||
T Consensus 4 ~~~ri~~e~k~v~~~~eisq~~I~-ve~vn~~~~~ikG~I~GP~~TPYEGG~FeldI~iPe~YPF~pPkv~F~TkIwHPn 82 (200)
T KOG0418|consen 4 AFKRINREQKEVLDDPEISQAGII-VEMVNENLKEIKGHIAGPEDTPYEGGVFELDIKIPENYPFKPPKVKFITKIWHPN 82 (200)
T ss_pred HHHHHHHHHHHhccChhhhhcceE-EEEccCChhhceeEecCCCCCCCCCceEEEEEecCCCCCCCCCceeeeeeeecCC
Confidence 678899999988 233 4554 445568999999999 999999999999999999999999999999999999999
Q ss_pred ccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 223 IDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 223 Id~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|++ +|.||||||.+.|.+++||.++|++||++|..|++.||.+.++|+.|.+|++.|.+.||.|...+.
T Consensus 83 VSs~tGaICLDilkd~Wa~slTlrtvLislQalL~~pEp~dPqDavva~qy~~n~~~F~~TAr~WT~~fA 152 (200)
T KOG0418|consen 83 VSSQTGAICLDILKDQWAASLTLRTVLISLQALLCAPEPKDPQDAVVAEQYVDNYEMFYKTARYWTTEFA 152 (200)
T ss_pred CCcccccchhhhhhcccchhhhHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 998 899999999999999999999999999999999999999999999999999999999999876544
No 14
>KOG0424|consensus
Probab=100.00 E-value=2.2e-34 Score=243.43 Aligned_cols=141 Identities=27% Similarity=0.513 Sum_probs=128.8
Q ss_pred HHHHHHHHhcc--CCCCCeEEeccC-----CCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 150 CCVFLSDLNEL--NLPKTCTTEFPN-----PDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 150 ~~Rl~kEL~eL--~lP~~~~~~~p~-----~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
+.||+.|=+.. +-|-+.+ +.|. ..|++.|+|.| |+.+|+||||.|++++.||++||..||+++|.++.|||
T Consensus 6 ~~rl~eErk~wrk~hp~gf~-AkP~~~~dg~~nl~~Wec~IPG~~~t~wEGg~y~l~v~F~~dyP~~PPkckF~~pl~HP 84 (158)
T KOG0424|consen 6 LNRLAEERKKWRKDHPFGFY-AKPVKNADGTLNLMNWECGIPGKKGTPWEGGLYKLTVNFPDDYPSSPPKCKFKPPLFHP 84 (158)
T ss_pred HHHHHHHHHHHhhcCCCcee-eeccCCCCCcceeEEEEeecCCCCCCcCcCceEEEEEeCCccCCCCCCccccCCCCcCC
Confidence 56777777777 4677775 4452 34799999999 99999999999999999999999999999999999999
Q ss_pred cccCCCcEEeccCCCC--CCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 222 NIDLEGNVCLNILRED--WKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 222 NId~~G~VCL~iL~e~--W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|||++|.|||+||.++ |+|+.||.+||.+||.||.+||+.+|+|.||...|..||.+|+++||.+++++.
T Consensus 85 NVypsgtVcLsiL~e~~~W~paitikqiL~gIqdLL~~Pn~~~pAq~eA~~~~~~~r~eYekrvr~qak~~a 156 (158)
T KOG0424|consen 85 NVYPSGTVCLSILNEEKDWRPAITIKQILLGIQDLLDTPNITSPAQTEAYTIYCQDRAEYEKRVRAQAKEYA 156 (158)
T ss_pred CcCCCCcEehhhhccccCCCchhhHHHHHHHHHHHhcCCCCCCchhhHHHHHHhhCHHHHHHHHHHHHHHhc
Confidence 9999999999999865 999999999999999999999999999999999999999999999999998764
No 15
>KOG0422|consensus
Probab=100.00 E-value=1.6e-32 Score=231.01 Aligned_cols=146 Identities=29% Similarity=0.520 Sum_probs=134.7
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
+.+|+.+||++| +....+.-...++.|++.|++.|-|++-||..|.|+++|.||.+|||+||+|.|.|+|||||||+.
T Consensus 3 a~~Rl~kEL~dl~~~~~~~~rn~~~~e~nll~wt~llipd~ppY~kgaF~l~I~fp~eYPFKPP~i~f~tkiYHpNVDe~ 82 (153)
T KOG0422|consen 3 APRRLRKELADLQKNKMKFFRNIEVDEANLLKWTGLLIPDKPPYNKGAFRLEIDFPVEYPFKPPKIKFKTKIYHPNVDEK 82 (153)
T ss_pred hhHHHHHHHHHHHhccHHHHhhhhcccccceeEEeEecCCCCCccCcceEEEeeCCCCCCCCCCeeeeeeeeccCCCCCC
Confidence 568999999999 345555444456889999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 227 GNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 227 G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
|.||+.|+. |.|+|+..+.+||..|..++.+|+++.|++.|+|+.|.+|+..|.++|.++++++....
T Consensus 83 gqvClPiis~EnWkP~T~teqVlqaLi~liN~P~pe~plr~dlA~ey~~d~~kF~K~Aee~tkK~~e~r 151 (153)
T KOG0422|consen 83 GQVCLPIISAENWKPATRTEQVLQALIALINDPEPEHPLRIDLAEEYIKDPKKFVKNAEEFTKKYSEKR 151 (153)
T ss_pred CceeeeeeecccccCcccHHHHHHHHHHHhcCCCccccchhhHHHHHHHCHHHHHHhHHHHHHHhcCcC
Confidence 999999985 89999999999999999999999999999999999999999999999999999987653
No 16
>KOG0416|consensus
Probab=99.97 E-value=6.4e-31 Score=227.85 Aligned_cols=141 Identities=27% Similarity=0.497 Sum_probs=124.6
Q ss_pred HHHHHHHhcc-CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC-CC
Q psy16981 151 CVFLSDLNEL-NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL-EG 227 (302)
Q Consensus 151 ~Rl~kEL~eL-~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~-~G 227 (302)
+|+..|+..| .-...+. ..++++.+++|.+ ||.++||+||++++.+.+|++||++.|.|.|.++|||||||. +|
T Consensus 6 rRid~Dv~KL~~s~yeV~---~ind~m~ef~V~f~GP~ds~YegGvWkv~V~lPd~YP~KSPSIGFvnKIfHPNIDe~SG 82 (189)
T KOG0416|consen 6 RRIDTDVMKLLMSDYEVT---IINDGMQEFYVKFHGPKDSPYEGGVWKVRVELPDNYPFKSPSIGFVNKIFHPNIDEASG 82 (189)
T ss_pred cchhhHHHHHHhcCCeEE---EecCcccEEEEEeeCCCCCcccCceEEEEEECCCCCCCCCCcccceeeccCCCchhccC
Confidence 4555566555 2222222 2456799999999 999999999999999999999999999999999999999998 89
Q ss_pred cEEeccCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 228 NVCLNILREDWKPVLTINSIVYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 228 ~VCL~iL~e~W~P~~tI~sIL~~-Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
.||||.+...|+|.+.+..|+.. |-.||..||+.||||.|||.+|.++++.|+++|++++++++...
T Consensus 83 sVCLDViNQtWSp~yDL~NIfetfLPQLL~YPNp~DPLN~eAAal~l~~~~~Y~~~v~eY~~kYA~~~ 150 (189)
T KOG0416|consen 83 SVCLDVINQTWSPLYDLVNIFETFLPQLLRYPNPSDPLNGEAAALYLRDPEEYEEKVKEYIKKYATPE 150 (189)
T ss_pred ccHHHHHhhhhhHHHHHHHHHHHHhHHHhcCCCCCCCcccHHHHHHhcCHHHHHHHHHHHHHHhcChh
Confidence 99999999999999999999876 57899999999999999999999999999999999999998765
No 17
>KOG0423|consensus
Probab=99.96 E-value=2.7e-29 Score=218.39 Aligned_cols=141 Identities=29% Similarity=0.570 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
....+.+.+|+++| ++|.++. ++++++|+....+.| ||.||||++|.|+..+.+..+||++||+-.|+|+||||||
T Consensus 9 p~vik~~~kEl~~l~~~PPdGIK-V~~NeeD~tdiqa~IeGP~GTPYa~GlFRmKL~L~kDFP~sPPKgYFlTKIFHPNV 87 (223)
T KOG0423|consen 9 PNVIKQLAKELKSLDESPPDGIK-VVVNEEDFTDIQADIEGPVGTPYANGLFRMKLALSKDFPHSPPKGYFLTKIFHPNV 87 (223)
T ss_pred hHHHHHHHHHHHhcccCCCCceE-EecChHHhHHHHhhccCCCCCccccceeeehhhhcCCCCCCCCcceeeeeeccCCc
Confidence 47788899999999 4777876 689999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q psy16981 224 DLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMR 288 (302)
Q Consensus 224 d~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~ 288 (302)
-.+|.||.+.|..+|+|.+.|.+||..|..||..|||++.+|.||.+++.+|.++|.+.||-+..
T Consensus 88 aaNGEICVNtLKkDW~p~LGirHvLltikCLLI~PnPESALNEeAGkmLLEnYdeYa~rARl~Te 152 (223)
T KOG0423|consen 88 AANGEICVNTLKKDWNPSLGIRHVLLTIKCLLIEPNPESALNEEAGKMLLENYDEYARRARLYTE 152 (223)
T ss_pred ccCceehhhhhhcccCcccchhhHhhhhheeeecCChHHHHhHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997753
No 18
>KOG0427|consensus
Probab=99.91 E-value=2.6e-24 Score=180.03 Aligned_cols=121 Identities=21% Similarity=0.449 Sum_probs=106.2
Q ss_pred ccchHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecc-c
Q psy16981 143 TQTLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETP-V 218 (302)
Q Consensus 143 ~~~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~-I 218 (302)
......+.+||+|||.++ ++|.|+... ..||+..|.+-+ |.+||.|+|.+|.+.+.||+.||++.|.|.|..+ .
T Consensus 10 k~ls~~at~RLqKEl~e~q~~pP~G~~~~--v~dnlqqWii~v~Ga~GTLYa~e~~qLq~~F~~~YP~esPqVmF~~~~P 87 (161)
T KOG0427|consen 10 KALSKIATNRLQKELSEWQNNPPTGFKHR--VTDNLQQWIIEVTGAPGTLYANETYQLQVEFPEHYPMESPQVMFVGPAP 87 (161)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcceee--cccchheeEEEEecCCceeecCcEEEEEEecCCCCCCCCCeEEEecCCC
Confidence 334467889999999999 578888653 678999999977 9999999999999999999999999999999987 5
Q ss_pred ccccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcC-CCCCCCcc
Q psy16981 219 YHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLE-PNPEDPLN 265 (302)
Q Consensus 219 ~HPNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~-Pn~~dPlN 265 (302)
.||+||.+|.||||||.++|+|++++.+|+++|.+||.+ ..-..|.+
T Consensus 88 ~HPHiYSNGHICL~iL~d~WsPAmsv~SvClSIlSMLSSs~eKqrP~D 135 (161)
T KOG0427|consen 88 LHPHIYSNGHICLDILYDSWSPAMSVQSVCLSILSMLSSSKEKQRPTD 135 (161)
T ss_pred CCCceecCCeEEEEeecccCCcchhhHHHHHHHHHHHccCccccCCCc
Confidence 799999999999999999999999999999999999975 33334443
No 19
>KOG0894|consensus
Probab=99.85 E-value=3.4e-21 Score=172.89 Aligned_cols=110 Identities=24% Similarity=0.526 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHhcc-CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecc--cccc
Q psy16981 146 LFHVCCVFLSDLNEL-NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETP--VYHP 221 (302)
Q Consensus 146 l~~~~~Rl~kEL~eL-~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~--I~HP 221 (302)
.+.+.+||+||++.| ..|...+.+.|.++|+++||-+| ||++|||+||.|+.+|.||++||++||.|++.|+ .|-+
T Consensus 3 ~k~a~kRl~keY~~l~k~Pv~~i~A~P~p~nILEWHYvl~GpedTPy~GG~YhGkl~FP~eyP~KPPaI~MiTPNGRFkt 82 (244)
T KOG0894|consen 3 SKAAVKRLQKEYRALCKDPVPYIVARPNPNNILEWHYVLRGPEDTPYYGGYYHGKLIFPPEYPFKPPAITMITPNGRFKT 82 (244)
T ss_pred chHHHHHHHHHHHHHHhCCchhhccCCCccceeeeEEEeeCCCCCCccCceeeeEEeCCCCCCCCCCeeEEECCCCceec
Confidence 367899999999999 34555556899999999999999 9999999999999999999999999999999986 4444
Q ss_pred cccCCCcEEeccCC---CCCCCcCCHHHHHHHHHHhhcCCC
Q psy16981 222 NIDLEGNVCLNILR---EDWKPVLTINSIVYGLQYLFLEPN 259 (302)
Q Consensus 222 NId~~G~VCL~iL~---e~W~P~~tI~sIL~~Iq~Ll~~Pn 259 (302)
| -++||++-. +.|+|.+++.+||.+|.++|.+-.
T Consensus 83 n----tRLCLSiSDfHPdsWNP~WsVStILtGLlSFM~e~~ 119 (244)
T KOG0894|consen 83 N----TRLCLSISDFHPDSWNPGWSVSTILTGLLSFMTEDS 119 (244)
T ss_pred C----ceEEEeccccCcCcCCCcccHHHHHHHHHHHHhcCC
Confidence 3 689999875 889999999999999999887644
No 20
>KOG0429|consensus
Probab=99.82 E-value=8e-20 Score=164.61 Aligned_cols=138 Identities=25% Similarity=0.403 Sum_probs=120.8
Q ss_pred HHHHHhcc--CCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCC--CCCeeeEecccccccccC-CC
Q psy16981 153 FLSDLNEL--NLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPH--EPPKVKCETPVYHPNIDL-EG 227 (302)
Q Consensus 153 l~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~--~PP~V~F~T~I~HPNId~-~G 227 (302)
|.-|+... ..-.|+ .+.|+-.+-+.|.++|....|.|.||+|+|+|.+|++||. +.|+|.|.+.++||+|.+ ++
T Consensus 24 llAEf~lV~~ekL~gI-yviPSyan~l~WFGViFvr~GiyaggVFRFtIliPdnfPdd~dlPrvvF~q~vfHP~icp~sk 102 (258)
T KOG0429|consen 24 LLAEFVLVCREKLDGI-YVIPSYANKLLWFGVIFVRKGIYAGGVFRFTILIPDNFPDDSDLPRVVFEQSVFHPLICPKSK 102 (258)
T ss_pred HHHHHHHHHhccCCce-EEcccccccceEEEEEEEecccccCceEEEEEEcCccCCCcCCCCeEEeeccccccccCCCcc
Confidence 33444444 234555 4789999999999999999999999999999999999995 899999999999999999 89
Q ss_pred cEEeccCCCCCCCcC-CHHHHHHHHHHhhcCCCCCCC-c-cHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 228 NVCLNILREDWKPVL-TINSIVYGLQYLFLEPNPEDP-L-NKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 228 ~VCL~iL~e~W~P~~-tI~sIL~~Iq~Ll~~Pn~~dP-l-N~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
.+|++-....|.-.- +|++||..||.+|.+|+.+.+ + |+|||.+|++++++|.++|+++++-+.
T Consensus 103 eLdl~raf~eWRk~ehhiwqvL~ylqriF~dpd~si~kl~N~eAa~l~~k~r~ef~~rvqe~vk~sr 169 (258)
T KOG0429|consen 103 ELDLNRAFPEWRKEEHHIWQVLVYLQRIFYDPDVSIDKLINPEAAVLYKKHRDEFRERVQECVKASR 169 (258)
T ss_pred ceeHhhhhhhhhccccHHHHHHHHHHHHhcCcccchhhhcChHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999987776797776 899999999999999998876 4 999999999999999999999988653
No 21
>KOG0428|consensus
Probab=99.74 E-value=7e-18 Score=154.26 Aligned_cols=111 Identities=22% Similarity=0.445 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
..+++||++|.+||..|...+.+.|-+||+++|+.+| ||.+|-|+||+|+.+|.||.+||++||.+..+|+- -.+..
T Consensus 10 npaVkRlmkEa~El~~Ptd~yha~plEdNlFEWhFtiRGp~dtdFeGGiYHGRI~lPadYPmKPPs~iLLTpN--GRFE~ 87 (314)
T KOG0428|consen 10 NPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTIRGPPDTDFEGGIYHGRIVLPADYPMKPPSIILLTPN--GRFEV 87 (314)
T ss_pred CHHHHHHHHHHHHhcCchhhhhhccchhceeeEEEEeeCCCCCCccCceeeeeEecCCCCCCCCCeEEEEcCC--Cceee
Confidence 4789999999999999998888999999999999999 99999999999999999999999999999998851 11223
Q ss_pred CCcEEeccCC---CCCCCcCCHHHHHHHHHHhhc-CCC
Q psy16981 226 EGNVCLNILR---EDWKPVLTINSIVYGLQYLFL-EPN 259 (302)
Q Consensus 226 ~G~VCL~iL~---e~W~P~~tI~sIL~~Iq~Ll~-~Pn 259 (302)
+-+|||+|-. |.|.|+|+|.+.|+.|..+|- .|+
T Consensus 88 nkKiCLSISgyHPEtWqPSWSiRTALlAlIgFmPt~p~ 125 (314)
T KOG0428|consen 88 NKKICLSISGYHPETWQPSWSIRTALLALIGFMPTKPE 125 (314)
T ss_pred CceEEEEecCCCccccCcchhHHHHHHHHHccccCCCC
Confidence 5679999986 889999999999999988884 344
No 22
>KOG0895|consensus
Probab=99.59 E-value=8.6e-16 Score=162.31 Aligned_cols=109 Identities=27% Similarity=0.488 Sum_probs=96.8
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecc--ccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETP--VYHPN 222 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~--I~HPN 222 (302)
..++..+.+.+.| ++|.++. +...++.+..+.++| |+.+|||.+|.|.|+|.||++||.+||.|...+. .++||
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~-vr~~e~r~d~~~~~~~g~~~tpy~~~~f~fd~~~~~~yp~~pp~~~~~s~~~r~npn 929 (1101)
T KOG0895|consen 851 QWAKKVQTEWKILPLSLPSGIF-VRAYEDRMDLLRAVIVGAAGTPYQDGLFFFDFQFPQDYPSSPPLVHYHSGGVRLNPN 929 (1101)
T ss_pred HHHHHHHHHHHhhhccCCCceE-EEechHHHHHHHHHhhCCCCCccccceEEEEeecCCCCCCCCCceEeecCceeeCcc
Confidence 4555566677777 6899996 567888888888877 9999999999999999999999999999999886 78999
Q ss_pred ccCCCcEEeccCC-------CCCCCcCCHHHHHHHHHHhhcC
Q psy16981 223 IDLEGNVCLNILR-------EDWKPVLTINSIVYGLQYLFLE 257 (302)
Q Consensus 223 Id~~G~VCL~iL~-------e~W~P~~tI~sIL~~Iq~Ll~~ 257 (302)
+|.+|+||+++|. |-|+|+-+|.+||.+||.|+..
T Consensus 930 ly~~g~vc~s~l~tw~g~~~e~w~~~s~~lq~l~s~q~l~l~ 971 (1101)
T KOG0895|consen 930 LYEDGKVCLSLLNTWHGRGNEVWNPSSSILQVLVSIQGLVLN 971 (1101)
T ss_pred cccccceehhhhccccCCCccccCcchhHHHHHHHhhhhhcc
Confidence 9999999999996 6799998999999999999864
No 23
>KOG0895|consensus
Probab=99.44 E-value=3.7e-13 Score=142.65 Aligned_cols=126 Identities=26% Similarity=0.411 Sum_probs=110.7
Q ss_pred CCccceeccccccchHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCC
Q psy16981 132 QESGFNVSIRQTQTLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHE 208 (302)
Q Consensus 132 ~~~~~~~~~~~~~~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~ 208 (302)
.|.+..-..+.+...+....|+++|++-+ ++|.++ .+.|.+.++...++.| ||.++||++|+|.|+|.||..||..
T Consensus 266 ~~~~~~k~~~~k~hs~~~skrv~ke~~llskdlpEgi-fvrp~e~RMd~I~alIig~~gtPy~~glf~Fdiq~P~~yPa~ 344 (1101)
T KOG0895|consen 266 FHHYAKKGKSSKPHSKNWSKKVAKELKLLSKDLPEGI-FVRPDEGRMDLIKALIIGPDGTPYADGLFLFDIQFPDTYPAV 344 (1101)
T ss_pred cccccccCCCCCccchhhHHHHHHHhhhhcccCCCCc-cccccccccceeeeEEecCCCCCCcCCceeeEeecCCCCCCC
Confidence 44455555666777788889999999999 578886 4678999999999877 8999999999999999999999999
Q ss_pred CCeeeEecc---cccccccCCCcEEeccCC-------CCCCCc-CCHHHHHHHHHHhhcCC
Q psy16981 209 PPKVKCETP---VYHPNIDLEGNVCLNILR-------EDWKPV-LTINSIVYGLQYLFLEP 258 (302)
Q Consensus 209 PP~V~F~T~---I~HPNId~~G~VCL~iL~-------e~W~P~-~tI~sIL~~Iq~Ll~~P 258 (302)
||.|.+++. .+.||.|.+|+||+++|. +.|+|. .+|.++|++||.++.+-
T Consensus 345 pp~v~~lt~~~~R~nPNlYn~GKVcLslLgTwtg~~~e~wtp~~~sl~qvL~sIQ~Li~~e 405 (1101)
T KOG0895|consen 345 PPHVKYLTGGGVRLNPNLYNDGKVCLSLLGTWTGSRREKWTPNGSSLLQVLESIQGLILNE 405 (1101)
T ss_pred CceeEEeeccceeecCCcccCceEEeeeeeecccccccCCCccccchhhhhhhhhhhhccc
Confidence 999999986 889999999999999985 689999 69999999999998754
No 24
>KOG0896|consensus
Probab=99.20 E-value=5.2e-11 Score=100.53 Aligned_cols=94 Identities=21% Similarity=0.407 Sum_probs=78.9
Q ss_pred CCCeEEeccCCCC--ceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC-CCcEEeccC--CC
Q psy16981 163 PKTCTTEFPNPDD--LLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL-EGNVCLNIL--RE 236 (302)
Q Consensus 163 P~~~~~~~p~~dd--l~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~-~G~VCL~iL--~e 236 (302)
+..++....+.+| +..|..+| ||+.|+||+-+|.++|.+.++||..||+|+|.++|.-+.|+. +|.|.-.-+ -+
T Consensus 23 ~~~~s~gl~d~~dmtl~rWtg~IiGPprT~yEnRiysLKI~Cgp~YPe~PP~vrf~tkinm~gvn~~~g~Vd~~~i~~L~ 102 (138)
T KOG0896|consen 23 DGTVSWGLEDDDDMTLTRWTGTIIGPPRTMYENRIYSLKIECGPKYPELPPTVRFGTKINMNGVNSSNGVVDPRDITVLA 102 (138)
T ss_pred CceeeccccCCCcceEeeeccceeCCCCcccccceeeEEEecCCCCCCCCceeEEEEEeeecccccCCCccCccccchhh
Confidence 5556655556666 56899877 999999999999999999999999999999999999999987 677765333 27
Q ss_pred CCCCcCCHHHHHHHHHHhhc
Q psy16981 237 DWKPVLTINSIVYGLQYLFL 256 (302)
Q Consensus 237 ~W~P~~tI~sIL~~Iq~Ll~ 256 (302)
+|+-.+++..||..+..++.
T Consensus 103 ~W~~~y~~~~vl~~lr~~m~ 122 (138)
T KOG0896|consen 103 RWQRSYSIKMVLGQLRKEMM 122 (138)
T ss_pred cccccchhhHHHHhhhHHHH
Confidence 99999999999999986553
No 25
>PF14461 Prok-E2_B: Prokaryotic E2 family B
Probab=98.23 E-value=3.8e-06 Score=70.99 Aligned_cols=67 Identities=24% Similarity=0.540 Sum_probs=60.7
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeeEeccc---ccccccCCCcEEe---ccCCCCCCCcCCHHHHHHHHHHhhcC
Q psy16981 191 RSGKFVFSFKVGPNYPHEPPKVKCETPV---YHPNIDLEGNVCL---NILREDWKPVLTINSIVYGLQYLFLE 257 (302)
Q Consensus 191 eGG~F~f~I~fp~~YP~~PP~V~F~T~I---~HPNId~~G~VCL---~iL~e~W~P~~tI~sIL~~Iq~Ll~~ 257 (302)
.|+.|.+.|.+|+.||..||.|....+. +-|||+.+|.+|+ ...-+.|.|...+..+|.....+|.+
T Consensus 34 ~~~~~~l~l~~p~~FP~~pp~v~l~d~~~~~~~pHv~~~G~LCl~~~~~~~D~~~P~~~~~~~l~~a~~lL~~ 106 (133)
T PF14461_consen 34 GGGPFPLRLVFPDDFPYLPPRVYLEDPKQFPLLPHVESDGKLCLLDEELVLDPWDPEGIIADCLERAIRLLED 106 (133)
T ss_pred CCeEEEEEEEECCcccCcCCEEEecCccccCccCeEcCCCeEEEecCCcccCccCHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999998654 6899999999999 66678899999999999999998873
No 26
>KOG0897|consensus
Probab=97.99 E-value=4e-06 Score=69.41 Aligned_cols=91 Identities=20% Similarity=0.425 Sum_probs=67.8
Q ss_pred EEEEEEeCCCCCCCCCeeeEeccccccccc-----CCCcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCC--CCCCccH
Q psy16981 195 FVFSFKVGPNYPHEPPKVKCETPVYHPNID-----LEGNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPN--PEDPLNK 266 (302)
Q Consensus 195 F~f~I~fp~~YP~~PP~V~F~T~I~HPNId-----~~G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn--~~dPlN~ 266 (302)
..+.+.|+++||+.||.++ +.+|.++ .+|.||+.+|. ++|+.+++|+.++++|..++-.-. ...|++.
T Consensus 13 ill~~~f~~~fp~~ppf~r----vv~p~~~~Gyvl~ggAIcmellt~qgwssay~Ve~vi~qiaatlVkG~~ri~~~a~k 88 (122)
T KOG0897|consen 13 ILLLDIFDDNFPFMPPFPR----VVKPLEDEGYVLEGGAICMELLTKQGWSSAYEVERVIMQIAATLVKGGARIEFPAEK 88 (122)
T ss_pred eEeeeecccCCCCCCCcce----eeeecccCCEEecchhhHHHHHccccccchhhHHHHHHHHHHHhhccceeEecCcch
Confidence 4567889999999999998 4566665 47899999995 789999999999999999987643 4456655
Q ss_pred HHHHHH--HhCHHHHHHHHHHHHHcc
Q psy16981 267 EAAEVL--QNNRRLFEQNVQKAMRGG 290 (302)
Q Consensus 267 eAA~~~--~~nr~~F~~~vr~~~~~~ 290 (302)
+-- +| ..--+.|+..++.--+-|
T Consensus 89 ~sk-~~s~~qa~~sfksLv~~heksg 113 (122)
T KOG0897|consen 89 SSK-LYSHSQAQQSFKSLVQIHEKSG 113 (122)
T ss_pred hhh-HhhHHHHHHHHHHHHHHHHhcC
Confidence 543 33 333566777776554443
No 27
>PF05743 UEV: UEV domain; InterPro: IPR008883 The N-terminal ubiquitin E2 variant (UEV) domain is ~145 amino acid residues in length and shows significant sequence similarity to E2 ubiquitin ligases but is unable to catalyze ubiquitin transfer as it lacks the active site cysteine that forms the transient thioester bond with the C terminus of ubiquitin (Ub). Nevertheless, at least some UEVs have retained the ability to bind Ub, and appear to act either as cofactors in ubiquitylation reactions, or as ubiquitin sensors. UEV domains also frequently contain other protein recognition motifs, and may generally serve to couple protein and Ub binding functions to facilitate the formation of multiprotein complexes [, , , ]. The UEV domain consists of a twisted four-stranded antiparallel beta-sheet having a meander topology, with four alpha-helices packed against one face of the sheet. The UEV fold is generally similar to canonical E2 ligases in the hydrophobic core and 'active site' regions, but differs significantly at both its N- and C-termini [, ]. The UEV domain is found in the eukaryotic tumour susceptibility gene 101 protein (TSG101). Altered transcripts of this gene have been detected in sporadic breast cancers and many other Homo sapiens malignancies. However, the involvement of this gene in neoplastic transformation and tumourigenesis is still elusive. TSG101 is required for normal cell function of embryonic and adult tissues but this gene is not a tumour suppressor for sporadic forms of breast cancer [].; GO: 0006464 protein modification process, 0015031 protein transport; PDB: 3R3Q_A 3R42_A 1UZX_A 3OBX_A 3OBS_A 3P9H_A 2F0R_A 3P9G_A 3OBQ_A 3OBU_A ....
Probab=97.88 E-value=2.2e-05 Score=65.81 Aligned_cols=104 Identities=24% Similarity=0.361 Sum_probs=65.2
Q ss_pred HHHHHHHHHhccCCCCCeEEeccCC--CCceEEEEEEeCCCcccCCcEE--EEEEEeCCCCCCCCCeeeEecccc-----
Q psy16981 149 VCCVFLSDLNELNLPKTCTTEFPNP--DDLLSFKLIISPDEGFYRSGKF--VFSFKVGPNYPHEPPKVKCETPVY----- 219 (302)
Q Consensus 149 ~~~Rl~kEL~eL~lP~~~~~~~p~~--ddl~~W~v~IgP~~tpYeGG~F--~f~I~fp~~YP~~PP~V~F~T~I~----- 219 (302)
.+.++...+.+|.+..... .+.+. ..++...++|.- .|+|..| .+.|.+|.+||.+||.|.......
T Consensus 4 d~~~~l~~y~~L~p~~~~f-t~~~G~~~~LL~L~Gtipi---~y~g~~y~iPi~Iwlp~~yP~~pP~v~v~pt~~m~I~~ 79 (121)
T PF05743_consen 4 DVLSVLQNYPSLRPRTDTF-TFNDGSSKLLLCLYGTIPI---TYKGSTYNIPICIWLPENYPYSPPIVYVRPTPSMVIKP 79 (121)
T ss_dssp HHHHHHHHSTTEEEEEEEE-ESTTSTEEEEEEEEEEEEE---CCTTCCEEEEEEEEE-TTTTTSSSEEEE-GCCTECCGG
T ss_pred HHHHHHHHCCCCcEeeeee-EcCCCChheEEEEecCccc---ccCCcccceeEEEEEcccCCCCCCEEEEeCCCCCCcCC
Confidence 3444555555544333322 23332 245566666632 3777777 577788999999999998865422
Q ss_pred cccccCCCcEEeccCCCCCCC-cCCHHHHHHHHHHhhcC
Q psy16981 220 HPNIDLEGNVCLNILREDWKP-VLTINSIVYGLQYLFLE 257 (302)
Q Consensus 220 HPNId~~G~VCL~iL~e~W~P-~~tI~sIL~~Iq~Ll~~ 257 (302)
+.+||.+|+|.+..|. +|.+ ..+|.+++..++..|.+
T Consensus 80 ~~~Vd~~G~v~~pyL~-~W~~~~s~L~~lv~~l~~~F~~ 117 (121)
T PF05743_consen 80 SHHVDSNGRVYLPYLQ-NWNPPSSNLVDLVQELQAVFSE 117 (121)
T ss_dssp CCCB-TTSBB-SHHHH-T--TTTS-HHHHHHHHHHCCCH
T ss_pred CCeECCCCCEeCchhc-cCCCCCCCHHHHHHHHHHHHhH
Confidence 4499999999998886 7877 67999999999888853
No 28
>KOG0420|consensus
Probab=97.76 E-value=1.2e-05 Score=70.83 Aligned_cols=28 Identities=11% Similarity=0.147 Sum_probs=26.7
Q ss_pred ccccccceecccCCcccccccccccccC
Q psy16981 79 SVLLHQGVLLYKGPTYLFGQESGFNQTN 106 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~f~~~~~~~~~n 106 (302)
+++|.||+|||+||+|.|.++++..||.
T Consensus 63 elti~PdEGyY~gGkf~F~~~v~~~Yp~ 90 (184)
T KOG0420|consen 63 ELTITPDEGYYQGGKFRFKFKVPNAYPH 90 (184)
T ss_pred EEEEccCcceecCceEEEEEECCCCCCC
Confidence 7899999999999999999999999994
No 29
>KOG2391|consensus
Probab=96.46 E-value=0.0089 Score=58.12 Aligned_cols=95 Identities=25% Similarity=0.342 Sum_probs=69.3
Q ss_pred CCCCeEEeccCCC--CceEEEEEEeCCCcccCCcEEE--EEEEeCCCCCCCCCeeeEecc-----cccccccCCCcEEec
Q psy16981 162 LPKTCTTEFPNPD--DLLSFKLIISPDEGFYRSGKFV--FSFKVGPNYPHEPPKVKCETP-----VYHPNIDLEGNVCLN 232 (302)
Q Consensus 162 lP~~~~~~~p~~d--dl~~W~v~IgP~~tpYeGG~F~--f~I~fp~~YP~~PP~V~F~T~-----I~HPNId~~G~VCL~ 232 (302)
.|.+-...+.|.. .++...++| -.+|.|.+|. +.|.+.+.||..||.+..... -.|-+||.+|.|-|.
T Consensus 36 ~P~t~tf~~~Dg~s~~ll~~~GTI---p~~~~G~tYnIPV~iWlldtyP~~pP~c~VnPT~~M~ik~~~hVd~nG~V~LP 112 (365)
T KOG2391|consen 36 RPKTDTFTHNDGRSRLLLQLDGTI---PVPYQGVTYNIPVIIWLLDTYPYYPPICYVNPTSTMIIKVHEHVDPNGKVYLP 112 (365)
T ss_pred CcccceEEecCCCccchhhccCcc---cccccCCcccceEEEEecccCCCCCCeEEecCCchhhhHHhhccCCCCeEech
Confidence 3555555666643 455555554 2357787775 667789999999999876532 239999999999999
Q ss_pred cCCCCCCC-cCCHHHHHHHHHHhhcCCCC
Q psy16981 233 ILREDWKP-VLTINSIVYGLQYLFLEPNP 260 (302)
Q Consensus 233 iL~e~W~P-~~tI~sIL~~Iq~Ll~~Pn~ 260 (302)
.|. +|.| +.+|..++..|.+.|.++.+
T Consensus 113 YLh-~W~~pssdLv~Liq~l~a~f~~~pP 140 (365)
T KOG2391|consen 113 YLH-NWDPPSSDLVGLIQELIAAFSEDPP 140 (365)
T ss_pred hhc-cCCCccchHHHHHHHHHHHhcCCCc
Confidence 997 6765 45899999999998876443
No 30
>smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain.
Probab=91.90 E-value=0.92 Score=35.51 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=27.3
Q ss_pred EEEEEEeCCCc--ccCCcEEEEEEEeCCCCCCCCCeeeEec
Q psy16981 178 SFKLIISPDEG--FYRSGKFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 178 ~W~v~IgP~~t--pYeGG~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
.+.+.+.+.+. .-..-.+.+.|.+|++||..+|.|.+.+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~~~~ 64 (107)
T smart00591 24 EITIKLSPSSDEGEDQYVSLTLQVKLPENYPDEAPPISLLN 64 (107)
T ss_pred EEEEEEecCCCCCCccceEEEEEEECCCCCCCCCCCeEEEC
Confidence 45555543322 2334568899999999999999998765
No 31
>PF14462 Prok-E2_E: Prokaryotic E2 family E
Probab=91.79 E-value=1 Score=38.08 Aligned_cols=79 Identities=15% Similarity=0.274 Sum_probs=53.5
Q ss_pred ceEEEEEE--eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCCcE--EeccC--------------CCC
Q psy16981 176 LLSFKLII--SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNV--CLNIL--------------RED 237 (302)
Q Consensus 176 l~~W~v~I--gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~V--CL~iL--------------~e~ 237 (302)
-..|.++= ..+.|.|.+..-.+-|.+|+.||..+|.+.+..+-.... ..|.| |-+.. ...
T Consensus 23 ~~~~lii~~~~LP~G~y~~~~~dili~iP~gYP~~~~DmfY~~P~L~~~--~G~~iP~~~~~~~~~~G~~wQrWSRH~~~ 100 (122)
T PF14462_consen 23 GRRWLIIKGYPLPEGKYNHNEVDILILIPPGYPDAPLDMFYVYPPLKLA--DGGPIPNAAEVTQTFDGRTWQRWSRHNNP 100 (122)
T ss_pred CccEEEEeCCcCCCCccCccceEEEEECCCCCCCCCCCcEEECCceEcc--CCCcCCchhcchhhcCCeeeeeecCCCCC
Confidence 34565533 377888999999999999999999999887655422111 01223 32222 146
Q ss_pred CCCcC-CHHHHHHHHHHhhc
Q psy16981 238 WKPVL-TINSIVYGLQYLFL 256 (302)
Q Consensus 238 W~P~~-tI~sIL~~Iq~Ll~ 256 (302)
|.|.. +|.+.|.-|...|.
T Consensus 101 W~P~~D~l~T~l~~v~~~L~ 120 (122)
T PF14462_consen 101 WRPGVDDLWTHLARVEHALA 120 (122)
T ss_pred CCCCCCcHHHHHHHHHHHHh
Confidence 99987 79998888877663
No 32
>PF08694 UFC1: Ubiquitin-fold modifier-conjugating enzyme 1; InterPro: IPR014806 Ubiquitin-like (UBL) post-translational modifiers are covalently linked to most, if not all, target protein(s) through an enzymatic cascade analogous to ubiquitylation, consisting of E1 (activating), E2 (conjugating), and E3 (ligating) enzymes. Ubiquitin-fold modifier 1 (Ufm1) a ubiquitin-like protein is activated by a novel E1-like enzyme, Uba5, by forming a high-energy thioester bond. Activated Ufm1 is then transferred to its cognate E2-like enzyme, Ufc1, in a similar thioester linkage. This family represents the E2-like enzyme [].; PDB: 2Z6P_A 2K07_A 2Z6O_A 3EVX_D 3KPA_A.
Probab=91.44 E-value=0.21 Score=43.34 Aligned_cols=54 Identities=19% Similarity=0.326 Sum_probs=25.2
Q ss_pred EEEEEEeCCCCCCCCCeeeEecc-cccccccCCCcEEeccCC----CCCCCcCCHHHHH
Q psy16981 195 FVFSFKVGPNYPHEPPKVKCETP-VYHPNIDLEGNVCLNILR----EDWKPVLTINSIV 248 (302)
Q Consensus 195 F~f~I~fp~~YP~~PP~V~F~T~-I~HPNId~~G~VCL~iL~----e~W~P~~tI~sIL 248 (302)
|.|.|.+|..||..||.+..-.- =--.-.|..|+|||++-. ..=.|...|.+.|
T Consensus 77 F~~eFdIP~tYP~t~pEi~lPeLdGKTaKMYRGGkIClt~HFkPLWakN~PkfGIaHal 135 (161)
T PF08694_consen 77 FDLEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWAKNVPKFGIAHAL 135 (161)
T ss_dssp EEEEEE--TTTTTS----B-GGGTTT-SSBCCCCBB---TTHHHHHHCTTTT--HHHHH
T ss_pred EeeecCCCccCCCCCcceeccccCCchhhhhcCceEeeecccchhhhhcCCchhHHHHH
Confidence 56777789999999999875320 011123458999998754 2236677777665
No 33
>PF05773 RWD: RWD domain; InterPro: IPR006575 The RWD eukaryotic domain is found in RING finger (IPR001841 from INTERPRO) and WD repeat (IPR001680 from INTERPRO) containing proteins and DEXDc-like helicase (IPR001410 from INTERPRO) subfamily related to the ubiquitin-conjugating enzymes domain (IPR000608 from INTERPRO). ; GO: 0005515 protein binding; PDB: 2EBM_A 2EBK_A 2DAX_A 2DAW_A 2DAY_A 2DMF_A 1UKX_A 2YZ0_A.
Probab=90.49 E-value=0.53 Score=37.12 Aligned_cols=44 Identities=23% Similarity=0.439 Sum_probs=27.6
Q ss_pred CCceEEEEEEe---CCCcccCCcEEEEEEEeCCCCCCCCCeeeEecc
Q psy16981 174 DDLLSFKLIIS---PDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETP 217 (302)
Q Consensus 174 ddl~~W~v~Ig---P~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~ 217 (302)
.+...+.+.+. ...+.-....+.+.|.||++||..+|.|...+.
T Consensus 27 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~l~~~ 73 (113)
T PF05773_consen 27 KSPPSLEVKLDESSSSFESSSFPSVTLHFTLPPGYPESPPKISLESP 73 (113)
T ss_dssp SSSEEEEEEE--CEECCTTTTSEEEEEEEEE-SSTTSS--EEEEEEE
T ss_pred CCCCceeeeecccccccccccceeEEEEEeCCCcCCCcCCEEEEEcC
Confidence 34445555552 233344456799999999999999999986654
No 34
>PF14457 Prok-E2_A: Prokaryotic E2 family A
Probab=88.86 E-value=0.63 Score=41.04 Aligned_cols=62 Identities=16% Similarity=0.292 Sum_probs=48.7
Q ss_pred EEEEEeCCCCCCCCCeeeEecccc---cccccCC-----CcEEeccCC-CCCCCcCCHHHHHHHHHHhhcC
Q psy16981 196 VFSFKVGPNYPHEPPKVKCETPVY---HPNIDLE-----GNVCLNILR-EDWKPVLTINSIVYGLQYLFLE 257 (302)
Q Consensus 196 ~f~I~fp~~YP~~PP~V~F~T~I~---HPNId~~-----G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~ 257 (302)
.+.|.|+.+||..+|.|.++-+.| +||+... ..+|+.--. .+|.+..++..+|..|..-|.+
T Consensus 56 ~~~i~~~~~~~~~~P~v~~lR~dFP~~lpH~~~~~~~~p~~lCl~~~~~~e~~~~~g~~~~l~rl~~Wl~~ 126 (162)
T PF14457_consen 56 RVAIVFPPDSPLSAPEVPALRKDFPGNLPHQNPGPEGEPVSLCLYEGPWSEWRPSWGPEGFLDRLFDWLRD 126 (162)
T ss_pred eEEEEecCCCCCCCccchhhHhhCCCCCCccCCCCCCCCccceEecCCHHHhhhccCHHHHHHHHHHHHHH
Confidence 367899999999999877765433 5778765 679986543 5799999999999999887743
No 35
>KOG3357|consensus
Probab=63.89 E-value=10 Score=32.74 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhccCCCCCeEEeccCCCCceEEE-EEEeCCCcccCCc----------EEEEEEEeCCCCCCCCCeeeEec
Q psy16981 148 HVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFK-LIISPDEGFYRSG----------KFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 148 ~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~-v~IgP~~tpYeGG----------~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
....||..|+..|- ..+.-+.++=..|. +.--+.||-|-|. .|.+.+.+|-.||-.+|.+..-.
T Consensus 27 ~wvqrlkeey~sli-----~yvqnnk~~d~dwfrlesn~egtrwfgkcwy~hnllkyefdvefdipityp~tapeialpe 101 (167)
T KOG3357|consen 27 LWVQRLKEEYQSLI-----AYVQNNKSNDNDWFRLESNKEGTRWFGKCWYVHNLLKYEFDVEFDIPITYPTTAPEIALPE 101 (167)
T ss_pred HHHHHHHHHHHHHH-----HHHHhCcccCCcceEeccCccccceehhhhHhhhhhhheeeeeeccccccCCCCccccccc
Confidence 45667777877751 01111111111232 2224667766663 35566777999999999886421
Q ss_pred c-cccccccCCCcEEecc
Q psy16981 217 P-VYHPNIDLEGNVCLNI 233 (302)
Q Consensus 217 ~-I~HPNId~~G~VCL~i 233 (302)
- -----.|..|+|||.-
T Consensus 102 ldgktakmyrggkiclt~ 119 (167)
T KOG3357|consen 102 LDGKTAKMYRGGKICLTD 119 (167)
T ss_pred cCchhhhhhcCceEeecc
Confidence 0 0011234579999964
No 36
>KOG4018|consensus
Probab=48.85 E-value=24 Score=32.64 Aligned_cols=37 Identities=30% Similarity=0.585 Sum_probs=26.5
Q ss_pred ceEEEEEEeCCCc---ccCCcEEEEEEEeCCCCCCCCCeee
Q psy16981 176 LLSFKLIISPDEG---FYRSGKFVFSFKVGPNYPHEPPKVK 213 (302)
Q Consensus 176 l~~W~v~IgP~~t---pYeGG~F~f~I~fp~~YP~~PP~V~ 213 (302)
...+.+.|-...+ -|.| .+.+.|.++++||.+||-+.
T Consensus 30 ~~~f~v~iq~e~~e~d~~~~-~~~l~~s~tEnYPDe~Pli~ 69 (215)
T KOG4018|consen 30 PPIFEVTIQYEEGENDEPKG-SFILVFSLTENYPDEAPLIE 69 (215)
T ss_pred CccceeeeecccccCCCccc-cEEEEEEccCCCCCCCccee
Confidence 3336677743322 3444 78999999999999999993
No 37
>PTZ00390 ubiquitin-conjugating enzyme; Provisional
Probab=45.84 E-value=8.7 Score=33.25 Aligned_cols=29 Identities=14% Similarity=0.052 Sum_probs=24.2
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
+++| -|..+-|.||.|.+.+.+..+||..
T Consensus 35 ~~~i~GP~~tpY~gg~f~~~i~~p~~YP~~ 64 (152)
T PTZ00390 35 KILMEGPDGTPYEGGYYKLELFLPEQYPME 64 (152)
T ss_pred EEEEEcCCCCCCcCcEEEEEEECccccCCC
Confidence 4444 4778899999999999999999954
No 38
>PLN00172 ubiquitin conjugating enzyme; Provisional
Probab=41.04 E-value=11 Score=32.46 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=24.1
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.++| -|..+.|.||.|-+.+.+..+||..
T Consensus 34 ~~~i~GP~~tpyegg~f~~~i~fp~~YP~~ 63 (147)
T PLN00172 34 TASIIGPSDSPYAGGVFFLSILFPPDYPFK 63 (147)
T ss_pred EEEEECCCCCCCCCCEEEEEEECCcccCCC
Confidence 3344 4888999999999999999999963
No 39
>PF09765 WD-3: WD-repeat region; InterPro: IPR019162 This entry represents a region of approximately 100 residues containing three WD repeats and six cysteine residues- possibly as three cysteine-bridges associated with FancL. FancL is the ubiquitin ligase protein that mediates ubiquitination of FancD2, a key step in the DNA damage pathway [, ]. FancL belongs to the multisubunit Fanconi anemia (FA) complex, which is composed of subunits: FancA, FancB, FancC, FancE, FancF, FancG, FancL/PHF9 and FancM. The WD repeats are required for interaction of FancL with other subunits of the FA complex []. In humans defects in FancL are a cause of Fanconi anemia (FA) [MIM:227650], and the FA complex is not found in FA patients. FA is a genetically heterogeneous, autosomal recessive disorder characterised by progressive pancytopenia, a diverse assortment of congenital malformations, and a predisposition to the development of malignancies. At the cellular level it is associated with hypersensitivity to DNA-damaging agents, chromosomal instability (increased chromosome breakage), and defective DNA repair.; PDB: 3ZQS_B 3K1L_A.
Probab=36.16 E-value=38 Score=32.62 Aligned_cols=88 Identities=23% Similarity=0.426 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
...+.++.+||.++.-+..+.+. .++++...++.+.... -...++|.+|.+||.++|.+...-++ .
T Consensus 98 ~~~ys~ll~EIe~IGW~kl~~i~--~d~~ls~i~l~~~D~~-----R~H~l~l~l~~~yp~~~p~~~~~~P~-~------ 163 (291)
T PF09765_consen 98 PQYYSNLLKEIEAIGWDKLVQIQ--FDDDLSTIKLKIFDSS-----RQHYLELKLPSNYPFEPPSCSLDLPI-P------ 163 (291)
T ss_dssp -GGC-CHHHHHHHHHCGCCEEEE--E-CCCSEEEEEEETTC-----EEEEEEEETTTTTTTSEEEECS-TTS--------
T ss_pred cHHHHHHHHHHHHhccccceEEe--cCCCccEEEEEEEcCC-----ceEEEEEEECCCCCCCCceeeCCCCc-c------
Confidence 44555667777777555555431 2466777777664322 34578999999999999975432221 1
Q ss_pred CcEEeccCCCCCCC-cCCHHHHHHHHHHhh
Q psy16981 227 GNVCLNILREDWKP-VLTINSIVYGLQYLF 255 (302)
Q Consensus 227 G~VCL~iL~e~W~P-~~tI~sIL~~Iq~Ll 255 (302)
+...|.+ ..++.+|+...+..+
T Consensus 164 -------~~~~w~~~~ssL~~v~~qF~~~l 186 (291)
T PF09765_consen 164 -------FSLSWSPSQSSLKDVVQQFQEAL 186 (291)
T ss_dssp -------HHHHHHCHT-SHHHHHHHHHHHH
T ss_pred -------hhhhhcccccCHHHHHHHHHHHH
Confidence 1125777 557777766555444
No 40
>PF14460 Prok-E2_D: Prokaryotic E2 family D
Probab=35.64 E-value=49 Score=29.20 Aligned_cols=46 Identities=24% Similarity=0.386 Sum_probs=28.1
Q ss_pred ccccc---ccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCc
Q psy16981 216 TPVYH---PNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPL 264 (302)
Q Consensus 216 T~I~H---PNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPl 264 (302)
|+.|| +||+.+|+||+.-.. .|.....+.+..+...|.+-...++-
T Consensus 90 T~Ly~aPf~NV~~~g~vC~G~~~---~P~~~~~~~i~~we~~Ff~S~ftH~~ 138 (175)
T PF14460_consen 90 TPLYHAPFFNVYSNGSVCWGNNS---LPKISTLASIEAWEDAFFNSPFTHPN 138 (175)
T ss_pred CeeEeCCccccCCCCcEeeCCCc---CCCccCHHHHHHHHHHHhCCCccCCC
Confidence 55665 589999999997643 45454455566666555443344443
No 41
>PF06113 BRE: Brain and reproductive organ-expressed protein (BRE); InterPro: IPR010358 This family consists of several eukaryotic brain and reproductive organ-expressed (BRE) proteins. BRE is a putative stress-modulating gene, found able to down-regulate TNF-alpha-induced-NF-kappaB activation upon over expression. A total of six isoforms are produced by alternative splicing predominantly at either end of the gene. Compared to normal cells, immortalised human cell lines uniformly express higher levels of BRE. Peripheral blood monocytes respond to LPS by down-regulating the expression of all the BRE isoforms. It is thought that the function of BRE and its isoforms is to regulate peroxisomal activities [].
Probab=35.59 E-value=83 Score=31.04 Aligned_cols=67 Identities=21% Similarity=0.413 Sum_probs=44.8
Q ss_pred CceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEe-cccccccccCCCcEEeccCCCCCCCcC--CHHHHHHHH
Q psy16981 175 DLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE-TPVYHPNIDLEGNVCLNILREDWKPVL--TINSIVYGL 251 (302)
Q Consensus 175 dl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~-T~I~HPNId~~G~VCL~iL~e~W~P~~--tI~sIL~~I 251 (302)
....+++.| ||.|-..+-+|.|...||..||-+.|. ..-|+|-.. .+ ..| .+|.+.- .+..++..|
T Consensus 52 ~~DRF~l~I-----Py~~~~l~W~viFd~~~p~~pPDfiF~eD~~F~pd~s---~l--~~L-~~Wd~~dp~~Ll~li~EL 120 (333)
T PF06113_consen 52 NCDRFKLLI-----PYCGEYLKWDVIFDAQYPEFPPDFIFGEDDNFLPDPS---KL--PSL-VNWDPSDPNCLLNLISEL 120 (333)
T ss_pred ccceEEEEe-----eccCCEEEEEEEEcCCCCCCCCCEEeCCCcCcCCChh---hc--chh-hcCCCCCchHHHHHHHHH
Confidence 345666655 688999999999999999999999996 334787422 11 112 3687654 344444444
Q ss_pred H
Q psy16981 252 Q 252 (302)
Q Consensus 252 q 252 (302)
.
T Consensus 121 ~ 121 (333)
T PF06113_consen 121 R 121 (333)
T ss_pred H
Confidence 3
No 42
>TIGR03737 PRTRC_B PRTRC system protein B. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This protein family is designated protein B.
Probab=35.39 E-value=55 Score=30.61 Aligned_cols=40 Identities=23% Similarity=0.390 Sum_probs=27.1
Q ss_pred ccccc---ccccCCCcEEeccCCCCCCCcC-CHHHHHHHHHHhhcCCC
Q psy16981 216 TPVYH---PNIDLEGNVCLNILREDWKPVL-TINSIVYGLQYLFLEPN 259 (302)
Q Consensus 216 T~I~H---PNId~~G~VCL~iL~e~W~P~~-tI~sIL~~Iq~Ll~~Pn 259 (302)
|+.|| +||+.+|+||+.-.+ .|.. ++.+ +......|.+-.
T Consensus 131 T~L~~aPffNV~~~G~VC~G~~~---~P~~~~~~~-i~~we~~FF~S~ 174 (228)
T TIGR03737 131 TKLYQAPLFNVWSNGEICAGNAR---LPDRPTVAN-ISAWEDAFFSSR 174 (228)
T ss_pred CeeccCCcCccCCCCeEeeCCCc---CCCCcCHHH-HHHHHHHHhCCc
Confidence 44665 489999999996554 5554 6666 777777665433
No 43
>PF06113 BRE: Brain and reproductive organ-expressed protein (BRE); InterPro: IPR010358 This family consists of several eukaryotic brain and reproductive organ-expressed (BRE) proteins. BRE is a putative stress-modulating gene, found able to down-regulate TNF-alpha-induced-NF-kappaB activation upon over expression. A total of six isoforms are produced by alternative splicing predominantly at either end of the gene. Compared to normal cells, immortalised human cell lines uniformly express higher levels of BRE. Peripheral blood monocytes respond to LPS by down-regulating the expression of all the BRE isoforms. It is thought that the function of BRE and its isoforms is to regulate peroxisomal activities [].
Probab=34.11 E-value=43 Score=33.02 Aligned_cols=25 Identities=24% Similarity=0.699 Sum_probs=21.9
Q ss_pred EEEEEEeCCCCCCCCCeeeEeccccc
Q psy16981 195 FVFSFKVGPNYPHEPPKVKCETPVYH 220 (302)
Q Consensus 195 F~f~I~fp~~YP~~PP~V~F~T~I~H 220 (302)
|-+.|.+|..||.+.|.++|.+ +||
T Consensus 308 flvHi~Lp~~FP~~qP~ltlqS-~yH 332 (333)
T PF06113_consen 308 FLVHISLPIQFPKDQPSLTLQS-VYH 332 (333)
T ss_pred EEEEEeccCCCCCcCCeEEEEe-ecc
Confidence 7788889999999999999987 566
No 44
>cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.
Probab=31.34 E-value=58 Score=27.79 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.4
Q ss_pred CCcEEEEEEEeCCCCC-CCCCeeeEe
Q psy16981 191 RSGKFVFSFKVGPNYP-HEPPKVKCE 215 (302)
Q Consensus 191 eGG~F~f~I~fp~~YP-~~PP~V~F~ 215 (302)
+.|.|.|.-.+|-.|| ..||.|.|.
T Consensus 64 ~~G~y~f~ti~Pg~Y~~~R~~HiH~~ 89 (146)
T cd00421 64 ADGRYRFRTIKPGPYPIGRPPHIHFK 89 (146)
T ss_pred CCcCEEEEEEcCCCCCCCCCCEEEEE
Confidence 3489999999999999 999999886
No 45
>cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.
Probab=30.91 E-value=57 Score=29.37 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=23.2
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeeEec
Q psy16981 191 RSGKFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 191 eGG~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
+.|.|.|.=.+|--||..||.|+|.-
T Consensus 85 ~~G~~~F~TI~PG~Y~gR~~HIH~~V 110 (188)
T cd03457 85 ADGVVTFTTIFPGWYPGRATHIHFKV 110 (188)
T ss_pred CCccEEEEEECCCCCCCCCceEEEEE
Confidence 46899999999999999999999863
No 46
>KOG0427|consensus
Probab=29.47 E-value=28 Score=30.12 Aligned_cols=51 Identities=20% Similarity=0.112 Sum_probs=36.0
Q ss_pred chhhhhhhhccccC---CCCCCccccc------------cceecccCCccccccccccccc-CCccc
Q psy16981 60 SAAQLRITKAELEL---PTYSGSVLLH------------QGVLLYKGPTYLFGQESGFNQT-NTNLI 110 (302)
Q Consensus 60 s~~~~r~~~~~~~~---p~~~~~~~~~------------~~~~~~~~~~~~f~~~~~~~~~-n~~~i 110 (302)
-+|+-|+|||-.++ |+++-.+-|. -.-+.|.|.+|---|+++..|| ++++.
T Consensus 14 ~~at~RLqKEl~e~q~~pP~G~~~~v~dnlqqWii~v~Ga~GTLYa~e~~qLq~~F~~~YP~esPqV 80 (161)
T KOG0427|consen 14 KIATNRLQKELSEWQNNPPTGFKHRVTDNLQQWIIEVTGAPGTLYANETYQLQVEFPEHYPMESPQV 80 (161)
T ss_pred HHHHHHHHHHHHHHhcCCCCcceeecccchheeEEEEecCCceeecCcEEEEEEecCCCCCCCCCeE
Confidence 45678899876555 5555422222 2236899999999999999999 66654
No 47
>smart00212 UBCc Ubiquitin-conjugating enzyme E2, catalytic domain homologues. Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. This pathway functions in regulating many fundamental processes required for cell viability.TSG101 is one of several UBC homologues that lacks this active site cysteine.
Probab=22.38 E-value=45 Score=27.98 Aligned_cols=26 Identities=12% Similarity=-0.031 Sum_probs=23.5
Q ss_pred ccceecccCCcccccccccccccCCc
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNTN 108 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~~ 108 (302)
-++.+.|+|+.|-|.+.+..+||+..
T Consensus 37 gp~~~~y~g~~f~~~l~~p~~yP~~p 62 (145)
T smart00212 37 GPPGTPYEGGIFKLTIEFPPDYPFKP 62 (145)
T ss_pred cCCCCCcCCcEEEEEEECCcccCCCC
Confidence 47889999999999999999999775
No 48
>cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=21.59 E-value=1.1e+02 Score=26.74 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=22.1
Q ss_pred CcEEEEEEEeCCCCC-----CCCCeeeEec
Q psy16981 192 SGKFVFSFKVGPNYP-----HEPPKVKCET 216 (302)
Q Consensus 192 GG~F~f~I~fp~~YP-----~~PP~V~F~T 216 (302)
.|.|.|.-.+|--|| ..||.|.|.-
T Consensus 72 ~G~~~f~Ti~Pg~Y~~p~~~~R~~HIH~~V 101 (158)
T cd03459 72 DGRYRFRTIKPGAYPWRNGAWRAPHIHVSV 101 (158)
T ss_pred CCcEEEEEECCCCcCCCCCCCcCCEEEEEE
Confidence 488999999999999 8999998863
Done!