Query psy16981
Match_columns 302
No_of_seqs 267 out of 1468
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 18:39:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nvu_C NEDD8-conjugating enzym 100.0 4.5E-50 1.6E-54 353.7 18.0 147 156-302 34-180 (180)
2 3o2u_A NEDD8-conjugating enzym 100.0 2.5E-49 8.7E-54 351.6 14.1 147 156-302 37-189 (190)
3 1y8x_A Ubiquitin-conjugating e 100.0 1.6E-46 5.3E-51 325.2 17.8 156 147-302 5-160 (160)
4 4gpr_A Ubiquitin-conjugating e 100.0 6.3E-43 2.2E-47 299.4 17.6 145 147-292 3-150 (151)
5 2r0j_A Ubiquitin carrier prote 100.0 9.6E-43 3.3E-47 297.7 15.6 143 150-293 3-148 (149)
6 2ayv_A Ubiquitin-conjugating e 100.0 1.3E-42 4.3E-47 302.5 16.6 146 145-291 18-166 (166)
7 2aak_A UBC1, ubiquitin conjuga 100.0 1.8E-42 6.3E-47 296.6 16.7 145 148-293 4-151 (152)
8 3h8k_A Ubiquitin-conjugating e 100.0 2.7E-42 9.1E-47 298.8 17.7 144 148-291 3-162 (164)
9 2c2v_B Ubiquitin-conjugating e 100.0 8.3E-43 2.8E-47 299.7 14.3 144 150-294 7-153 (154)
10 1z2u_A Ubiquitin-conjugating e 100.0 2.2E-42 7.6E-47 295.5 16.5 142 149-291 5-149 (150)
11 1zdn_A Ubiquitin-conjugating e 100.0 1.5E-42 5.2E-47 299.3 15.5 144 147-291 12-158 (158)
12 2c4o_A Ubiquitin-conjugating e 100.0 3.8E-42 1.3E-46 299.1 18.1 144 147-291 18-164 (165)
13 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.6E-42 8.7E-47 301.4 16.6 145 148-293 4-151 (169)
14 2ucz_A UBC7, ubiquitin conjuga 100.0 2.9E-42 9.9E-47 299.1 16.8 144 148-291 4-163 (165)
15 1yh2_A HSPC150 protein similar 100.0 8.6E-42 2.9E-46 297.7 17.9 147 147-294 3-156 (169)
16 1fxt_A Ubiquitin-conjugating e 100.0 1.8E-42 6.3E-47 295.7 12.9 142 149-291 2-148 (149)
17 3fn1_B NEDD8-conjugating enzym 100.0 6.6E-42 2.3E-46 297.3 16.1 151 141-291 7-166 (167)
18 2e2c_A Ubiquitin conjugating e 100.0 9.6E-42 3.3E-46 293.5 15.7 142 148-291 9-153 (156)
19 1jat_A Ubiquitin-conjugating e 100.0 6.5E-42 2.2E-46 294.3 14.0 144 149-293 6-152 (155)
20 1wzv_A Ubiquitin-conjugating e 100.0 1.5E-41 5E-46 291.9 15.5 145 149-293 5-152 (155)
21 3bzh_A Ubiquitin-conjugating e 100.0 2.3E-41 7.9E-46 301.5 17.3 147 144-291 44-193 (194)
22 3rcz_B SUMO-conjugating enzyme 100.0 2.3E-41 7.8E-46 293.8 16.4 144 147-291 9-162 (163)
23 1i7k_A Ubiquitin-conjugating e 100.0 1.9E-41 6.6E-46 298.6 15.4 146 147-294 29-177 (179)
24 2bep_A Ubiquitin-conjugating e 100.0 2.6E-41 8.9E-46 291.6 15.7 144 148-292 8-158 (159)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3E-41 1E-45 300.7 15.5 147 145-292 29-192 (193)
26 1c4z_D UBCH7, ubiquitin conjug 100.0 1.9E-41 6.4E-46 290.9 13.2 146 149-294 3-151 (154)
27 2pwq_A Ubiquitin conjugating e 100.0 2.4E-41 8.3E-46 305.9 14.5 150 145-295 20-173 (216)
28 3rz3_A Ubiquitin-conjugating e 100.0 6.9E-41 2.4E-45 295.5 16.0 144 148-291 7-172 (183)
29 2gjd_A Ubiquitin-conjugating e 100.0 1.1E-40 3.9E-45 287.2 16.5 143 148-291 4-156 (157)
30 2awf_A Ubiquitin-conjugating e 100.0 4.3E-41 1.5E-45 294.3 13.0 140 147-286 16-172 (172)
31 3k9o_A Ubiquitin-conjugating e 100.0 1.2E-40 4E-45 297.6 15.8 144 149-293 6-156 (201)
32 1yrv_A Ubiquitin-conjugating l 100.0 9.2E-41 3.2E-45 291.7 14.2 140 148-289 23-168 (169)
33 2grr_A Ubiquitin-conjugating e 100.0 3.1E-40 1E-44 285.7 16.7 144 148-292 7-160 (161)
34 2y9m_A Ubiquitin-conjugating e 100.0 2.7E-40 9.3E-45 289.1 15.8 145 148-292 6-168 (172)
35 1tte_A Ubiquitin-conjugating e 100.0 9.7E-41 3.3E-45 301.8 13.3 145 149-294 3-152 (215)
36 3e46_A Ubiquitin-conjugating e 100.0 7.5E-40 2.6E-44 302.5 16.0 148 147-295 56-210 (253)
37 2onu_A Ubiquitin-conjugating e 100.0 9.6E-41 3.3E-45 286.7 8.6 143 150-294 4-149 (152)
38 2z5d_A Ubiquitin-conjugating e 100.0 3E-40 1E-44 291.1 9.4 144 147-293 24-170 (179)
39 4ddg_A Ubiquitin-conjugating e 100.0 4.5E-39 1.5E-43 313.8 15.9 151 148-299 3-156 (399)
40 1yf9_A Ubiquitin carrier prote 100.0 5.2E-39 1.8E-43 281.1 11.9 142 148-293 12-157 (171)
41 4ds2_A Ubiquitin-conjugating e 100.0 3.1E-37 1.1E-41 268.3 11.0 135 150-285 10-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 1.3E-36 4.3E-41 262.5 8.1 130 145-275 18-156 (156)
43 2a4d_A Ubiquitin-conjugating e 100.0 4.5E-35 1.5E-39 253.9 11.8 124 146-269 23-156 (160)
44 2fo3_A Ubiquitin-conjugating e 100.0 6.4E-35 2.2E-39 242.7 11.7 114 147-261 5-122 (125)
45 3ceg_A Baculoviral IAP repeat- 100.0 6.3E-35 2.2E-39 277.4 12.6 150 144-293 72-244 (323)
46 1jat_B Ubiquitin-conjugating e 100.0 8.7E-36 3E-40 251.8 5.5 124 148-272 6-138 (138)
47 2h2y_A Ubiquitin-conjugating e 100.0 2.5E-34 8.7E-39 242.5 13.6 117 143-260 15-135 (136)
48 2hlw_A Ubiquitin-conjugating e 100.0 8.8E-35 3E-39 254.2 8.7 122 148-269 35-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 7E-33 2.4E-37 234.1 12.3 106 151-256 25-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 5.4E-33 1.9E-37 246.1 6.2 148 146-300 12-165 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.5E-32 8.6E-37 241.7 1.3 136 147-291 26-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.8 1.8E-22 6E-27 175.3 0.5 98 147-249 31-144 (172)
53 3r3q_A Suppressor protein STP2 99.7 3.3E-17 1.1E-21 142.1 8.5 91 171-262 55-161 (162)
54 3kpa_A Probable ubiquitin fold 99.4 1.5E-14 5.3E-19 123.5 -0.3 88 147-242 33-132 (168)
55 3obq_A Tumor susceptibility ge 99.4 8.9E-13 3E-17 112.5 7.3 80 173-257 50-138 (146)
56 1tt5_E Ubiquitin-conjugating e 97.8 3E-06 1E-10 51.7 -0.3 21 33-53 1-21 (26)
57 2yz0_A Serine/threonine-protei 92.0 0.7 2.4E-05 37.4 8.5 41 176-216 45-85 (138)
58 2ebm_A RWD domain-containing p 90.9 0.51 1.7E-05 37.7 6.4 41 176-216 37-78 (128)
59 2ebk_A RWD domain-containing p 90.7 1.1 3.8E-05 35.8 8.3 40 176-215 39-78 (128)
60 2daw_A RWD domain containing p 88.4 2.7 9.1E-05 35.0 9.2 66 194-279 76-141 (154)
61 2dax_A Protein C21ORF6; RWD do 85.6 2.5 8.5E-05 34.9 7.4 23 194-216 74-96 (152)
62 2day_A Ring finger protein 25; 85.0 2.2 7.4E-05 33.9 6.5 24 193-216 59-82 (128)
63 3fn1_B NEDD8-conjugating enzym 83.6 0.41 1.4E-05 40.5 1.7 53 55-107 8-76 (167)
64 1y8x_A Ubiquitin-conjugating e 82.6 0.57 1.9E-05 39.5 2.2 50 58-107 3-66 (160)
65 2h2y_A Ubiquitin-conjugating e 81.7 0.59 2E-05 38.4 1.9 51 57-107 16-82 (136)
66 1ukx_A GCN2, GCN2 EIF2alpha ki 79.1 1.1 3.7E-05 36.1 2.6 39 177-215 45-85 (137)
67 3zqs_A E3 ubiquitin-protein li 74.4 7.9 0.00027 33.8 7.0 82 152-255 5-86 (186)
68 2f4w_A Ubiquitin-conjugating e 74.3 0.73 2.5E-05 39.9 0.4 51 57-107 10-76 (187)
69 2fo3_A Ubiquitin-conjugating e 69.5 1 3.5E-05 36.3 0.1 25 83-107 44-68 (125)
70 3bzh_A Ubiquitin-conjugating e 67.3 1.1 3.6E-05 39.2 -0.2 50 58-107 45-110 (194)
71 3h8k_A Ubiquitin-conjugating e 66.9 1.6 5.5E-05 36.6 0.9 28 80-107 38-66 (164)
72 4gpr_A Ubiquitin-conjugating e 66.9 1.4 4.7E-05 36.7 0.4 29 79-107 37-66 (151)
73 2ayv_A Ubiquitin-conjugating e 63.5 1.8 6.3E-05 36.6 0.6 29 79-107 54-83 (166)
74 1yrv_A Ubiquitin-conjugating l 62.4 1.9 6.5E-05 36.7 0.5 29 79-107 56-85 (169)
75 1c4z_D UBCH7, ubiquitin conjug 61.1 3.6 0.00012 34.1 2.0 28 80-107 37-64 (154)
76 2e2c_A Ubiquitin conjugating e 60.7 2.4 8.3E-05 35.3 0.9 25 83-107 47-71 (156)
77 2onu_A Ubiquitin-conjugating e 59.4 1.3 4.6E-05 36.9 -1.0 29 79-107 32-61 (152)
78 1i7k_A Ubiquitin-conjugating e 57.9 2.5 8.5E-05 36.4 0.5 49 59-107 28-92 (179)
79 2c4o_A Ubiquitin-conjugating e 57.7 2.5 8.5E-05 35.7 0.4 28 80-107 53-81 (165)
80 2pwq_A Ubiquitin conjugating e 56.6 2.9 9.8E-05 37.1 0.6 25 83-107 61-85 (216)
81 2ucz_A UBC7, ubiquitin conjuga 56.2 3 0.0001 35.0 0.7 25 83-107 43-67 (165)
82 1ayz_A UBC2, ubiquitin-conjuga 55.3 3 0.0001 35.4 0.5 25 83-107 42-66 (169)
83 2aak_A UBC1, ubiquitin conjuga 55.2 3.1 0.0001 34.5 0.5 25 83-107 42-66 (152)
84 1jat_A Ubiquitin-conjugating e 54.7 2.5 8.7E-05 35.1 -0.0 28 80-107 39-67 (155)
85 2f4z_A Tgtwinscan_2721 - E2 do 53.6 3.4 0.00012 36.0 0.6 25 83-107 83-107 (193)
86 3e46_A Ubiquitin-conjugating e 53.3 3.4 0.00011 37.6 0.5 50 59-108 55-123 (253)
87 2awf_A Ubiquitin-conjugating e 53.0 4.1 0.00014 34.6 1.0 25 83-107 56-80 (172)
88 2a7l_A Hypothetical ubiquitin- 50.7 5.8 0.0002 32.5 1.5 25 83-107 62-86 (136)
89 2z5d_A Ubiquitin-conjugating e 49.6 4.4 0.00015 34.9 0.6 25 83-107 59-83 (179)
90 2q0v_A Ubiquitin-conjugating e 48.1 6.7 0.00023 32.8 1.5 25 83-107 63-87 (156)
91 1z2u_A Ubiquitin-conjugating e 47.8 4.8 0.00017 33.1 0.6 28 80-107 38-66 (150)
92 3k9o_A Ubiquitin-conjugating e 46.2 5.1 0.00018 34.7 0.6 29 80-108 42-71 (201)
93 3rz3_A Ubiquitin-conjugating e 41.5 7.5 0.00026 33.2 0.8 29 80-108 42-71 (183)
94 1tte_A Ubiquitin-conjugating e 36.6 10 0.00036 33.4 1.0 25 83-107 41-65 (215)
95 4ddg_A Ubiquitin-conjugating e 30.3 12 0.00042 35.8 0.4 28 80-107 37-65 (399)
96 1jat_B Ubiquitin-conjugating e 28.1 19 0.00066 29.1 1.2 25 83-107 48-72 (138)
97 2nvu_C NEDD8-conjugating enzym 27.7 20 0.00067 30.6 1.2 70 33-107 3-86 (180)
98 3o2u_A NEDD8-conjugating enzym 27.4 20 0.00068 30.8 1.2 74 32-107 2-95 (190)
99 2r0j_A Ubiquitin carrier prote 26.6 20 0.0007 29.3 1.1 25 83-107 39-63 (149)
100 1fxt_A Ubiquitin-conjugating e 26.0 22 0.00076 29.0 1.2 25 83-107 40-64 (149)
101 2y9m_A Ubiquitin-conjugating e 25.6 22 0.00074 30.0 1.1 25 83-107 56-80 (172)
102 2c2v_B Ubiquitin-conjugating e 25.1 23 0.00078 29.2 1.1 28 80-107 39-67 (154)
103 1yh2_A HSPC150 protein similar 24.8 23 0.00079 29.7 1.1 25 83-107 42-66 (169)
104 2bep_A Ubiquitin-conjugating e 23.5 25 0.00087 29.0 1.1 28 80-107 45-73 (159)
105 1wzv_A Ubiquitin-conjugating e 23.4 20 0.00068 29.5 0.4 28 80-107 39-66 (155)
106 1whz_A Hypothetical protein; a 21.6 39 0.0013 23.8 1.7 33 8-40 25-63 (70)
107 2gjd_A Ubiquitin-conjugating e 21.1 29 0.001 28.6 1.0 25 83-107 47-71 (157)
108 2a4d_A Ubiquitin-conjugating e 21.0 30 0.001 29.0 1.1 25 83-107 67-91 (160)
109 2hlw_A Ubiquitin-conjugating e 20.7 36 0.0012 28.7 1.5 25 83-107 77-101 (170)
110 1yf9_A Ubiquitin carrier prote 20.6 31 0.0011 29.1 1.1 28 80-107 42-70 (171)
111 1zdn_A Ubiquitin-conjugating e 20.4 32 0.0011 28.4 1.1 25 83-107 51-75 (158)
No 1
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-50 Score=353.73 Aligned_cols=147 Identities=87% Similarity=1.477 Sum_probs=143.6
Q ss_pred HHhccCCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCCcEEeccCC
Q psy16981 156 DLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILR 235 (302)
Q Consensus 156 EL~eL~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~VCL~iL~ 235 (302)
||++|++|.++.+.+|+++|+++|+++|||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.
T Consensus 34 El~~l~~~~~i~~~~p~~~nl~~W~~~igP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~ 113 (180)
T 2nvu_C 34 DINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILR 113 (180)
T ss_dssp HHHTCCCCTTEEEECSSTTCTTEEEEEECCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGT
T ss_pred HHHhcCCCCCeEEEecccccccceEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEccccc
Confidence 99999989999876789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCcccccccC
Q psy16981 236 EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVYFERCLK 302 (302)
Q Consensus 236 e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~~~~ 302 (302)
++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++|++++++|.+++++||+|++
T Consensus 114 ~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~~~~~~~~~~~~~ 180 (180)
T 2nvu_C 114 EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCLK 180 (180)
T ss_dssp TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSEEETTEEECCCBC
T ss_pred ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCCcCccccchhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 2
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.5e-49 Score=351.64 Aligned_cols=147 Identities=48% Similarity=0.925 Sum_probs=142.7
Q ss_pred HHhccCCCCCeEEec---cCCCCce---EEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCCcE
Q psy16981 156 DLNELNLPKTCTTEF---PNPDDLL---SFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNV 229 (302)
Q Consensus 156 EL~eL~lP~~~~~~~---p~~ddl~---~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~V 229 (302)
||++|.+|.++.+.+ |+++|++ +|+++|+|++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+|
T Consensus 37 El~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~i 116 (190)
T 3o2u_A 37 DLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNV 116 (190)
T ss_dssp HHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBB
T ss_pred HHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeE
Confidence 999999888887764 8999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCcccccccC
Q psy16981 230 CLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVYFERCLK 302 (302)
Q Consensus 230 CL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~~~~ 302 (302)
|+++|.++|+|+++|.+||.+|++||.+||+++|+|.+||++|++|+++|.++||+++++|++++++|++|++
T Consensus 117 Cl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~~~~~~~~~~~~ 189 (190)
T 3o2u_A 117 CLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGSIEHVKYDNIVS 189 (190)
T ss_dssp CCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCEETTEECCBCCC
T ss_pred echhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcCCCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985
No 3
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-46 Score=325.16 Aligned_cols=156 Identities=83% Similarity=1.394 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
..+.+||++||++|++|.++.+.+|+++|+++|+++|||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (160)
T 1y8x_A 5 SAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLE 84 (160)
T ss_dssp CHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEECCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred cHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCC
Confidence 45789999999999989999876689999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCcccccccC
Q psy16981 227 GNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVYFERCLK 302 (302)
Q Consensus 227 G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~~~~ 302 (302)
|.||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++|++++++|++|++
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~~~~~~~~~~~~ 160 (160)
T 1y8x_A 85 GNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCLK 160 (160)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEEETTEEECCCBC
T ss_pred CeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCccCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6.3e-43 Score=299.42 Aligned_cols=145 Identities=33% Similarity=0.663 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++||++| ++|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~-~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCS-AGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEE-EEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEE-EEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 35789999999999 6788886 468889999999999 8999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCC
Q psy16981 224 DLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYI 292 (302)
Q Consensus 224 d~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v 292 (302)
+.+|+||+++|.++|+|+++|.+||.+|++||.+||+++|+|.|||++|++|+++|.++||+++++++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999998764
No 5
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=9.6e-43 Score=297.69 Aligned_cols=143 Identities=30% Similarity=0.598 Sum_probs=135.9
Q ss_pred HHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 150 CCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 150 ~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
.+||++|+++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~-~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIM-AVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEE-EEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 47999999999 6788886 467889999999998 9999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 227 GNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 227 G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
|+||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+++++++..
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999988754
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-42 Score=302.55 Aligned_cols=146 Identities=32% Similarity=0.675 Sum_probs=137.2
Q ss_pred chHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 145 TLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 145 ~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
....+.+||++|+++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~-~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 96 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCS-AGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHP 96 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEE-EEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEE-EEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCC
Confidence 3345789999999999 6788886 568889999999999 89999999999999999999999999999999999999
Q ss_pred cccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 222 NIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 222 NId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
||+.+|+||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 97 NI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 97 NINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998753
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.8e-42 Score=296.64 Aligned_cols=145 Identities=27% Similarity=0.663 Sum_probs=137.1
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++|+++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~i~-~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIY 82 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEE-EEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCC
Confidence 4678999999999 5777886 568889999999988 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
.+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||++++++...
T Consensus 83 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999999999999999999999999999999999988754
No 8
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.7e-42 Score=298.81 Aligned_cols=144 Identities=24% Similarity=0.538 Sum_probs=134.7
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++||++| ++|.++.+...+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 4689999999999 67888875433455999999999 89999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 225 LEGNVCLNILR-------------EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 225 ~~G~VCL~iL~-------------e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
.+|+||+++|. ++|+|+++|.+||.+|++||.+||+++|+|.+||.+|++|+++|+++||++++++.
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~ 162 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSL 162 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 99999999997 78999999999999999999999999999999999999999999999999998763
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.3e-43 Score=299.74 Aligned_cols=144 Identities=27% Similarity=0.540 Sum_probs=134.6
Q ss_pred HHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 150 CCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 150 ~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
.+||++||++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+
T Consensus 7 ~~RL~kEl~~l~~~~~~~i~-~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 7 PRRIIKETQRLLAEPVPGIK-AEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CHHHHHHHHHHHHSCCTTEE-EEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEE-EEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 47999999998 6788886 468888999999999 9999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 227 GNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 227 G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
|+||+++|+++|+|+++|.+||.+|++||.+|++++|+|.|||++|++|+++|.++||+|+++++...
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~~ 153 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNN 153 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987653
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.2e-42 Score=295.54 Aligned_cols=142 Identities=34% Similarity=0.685 Sum_probs=135.4
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
+.+||++|+++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~-~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCS-AGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEE-EEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 568999999999 6788886 467889999999999 899999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 226 EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 226 ~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
+|+||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 149 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 149 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998865
No 11
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-42 Score=299.25 Aligned_cols=144 Identities=28% Similarity=0.594 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++||++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~-~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 90 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIK-VFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNV 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEE-EEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEE-EEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCC
Confidence 46789999999999 6788886 468889999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 224 DLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 224 d~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
+.+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.|||++|++|+++|.++||+|+++++
T Consensus 91 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 91 GANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998753
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.8e-42 Score=299.12 Aligned_cols=144 Identities=32% Similarity=0.672 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++|+++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCS-AGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEE-EEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEE-EEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 45789999999999 5778886 468889999999999 8999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 224 DLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 224 d~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
+.+|+||+++|+++|+|+++|.+||.+|++||.+||+++|+|.+||++|++|+++|.++||+++++++
T Consensus 97 ~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a 164 (165)
T 2c4o_A 97 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 164 (165)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred CCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998875
No 13
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-42 Score=301.40 Aligned_cols=145 Identities=28% Similarity=0.647 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++||++| ++|.++. +.|.++|+++|+++| ||++|||+||+|+|.|.||++||++||+|+|.|+||||||+
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~ 82 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPGVS-ASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVY 82 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEE-EEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCC
Confidence 4678999999999 5788886 468889999999988 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
.+|+||+++|+++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||++++++...
T Consensus 83 ~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~ 151 (169)
T 1ayz_A 83 ANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWED 151 (169)
T ss_dssp TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999987643
No 14
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-42 Score=299.07 Aligned_cols=144 Identities=27% Similarity=0.524 Sum_probs=134.8
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++|+++| ++|.++.+...+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~ 83 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIY 83 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCC
Confidence 5779999999999 57888875433457999999988 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccC-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 225 LEGNVCLNIL-------------REDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 225 ~~G~VCL~iL-------------~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
.+|+||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||++++++.
T Consensus 84 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~ 163 (165)
T 2ucz_A 84 PNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSL 163 (165)
T ss_dssp TTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred CCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHh
Confidence 9999999999 689999999999999999999999999999999999999999999999999998864
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.6e-42 Score=297.67 Aligned_cols=147 Identities=29% Similarity=0.583 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++||++| ++|.++.+ .++++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~-~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITC-WQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEE-EESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 35778999999999 67888864 68889999999988 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCC----CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 224 DLEGNVCLNILR----EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 224 d~~G~VCL~iL~----e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
+.+|+||+|+|+ ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++...
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcccc
Confidence 999999999998 89999999999999999999999999999999999999999999999999999888653
No 16
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.8e-42 Score=295.74 Aligned_cols=142 Identities=31% Similarity=0.547 Sum_probs=133.5
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCC-CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPD-DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~d-dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
+.+||++|+++| ++|.++.+ .|.++ |+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~-~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITL-EFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEE-EESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHhCCCCCEEE-EECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 357999999999 57788865 55555 999999999 99999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 225 L-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 225 ~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
. +|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a 148 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 148 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 8 999999999999999999999999999999999999999999999999999999999999998864
No 17
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.6e-42 Score=297.34 Aligned_cols=151 Identities=40% Similarity=0.759 Sum_probs=140.6
Q ss_pred ccccchHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccc
Q psy16981 141 RQTQTLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218 (302)
Q Consensus 141 ~~~~~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I 218 (302)
..+.....+.+||++||++| ++|.+|.+..++++|++.|+++|||++|||+||+|+|+|.||++||++||+|+|.|+|
T Consensus 7 ~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 86 (167)
T 3fn1_B 7 DSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 86 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEECCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCC
T ss_pred CCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEECCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCc
Confidence 34456678899999999999 4788998766778899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcEEeccCCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 219 YHPNIDLEGNVCLNILRE------DWKPVLTINSIVYGLQYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 219 ~HPNId~~G~VCL~iL~e------~W~P~~tI~sIL~~Iq~Ll~~-Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|||||+.+|+||+++|.. +|+|+++|.+||.+|++||.+ ||+++|+|.|||++|++|+++|.++||+++++++
T Consensus 87 ~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A 166 (167)
T 3fn1_B 87 WHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 166 (167)
T ss_dssp CCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 999999999999999975 799999999999999999999 7999999999999999999999999999998865
No 18
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-42 Score=293.50 Aligned_cols=142 Identities=32% Similarity=0.634 Sum_probs=134.3
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++|+++| +++.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~-~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGIT-AFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEE-EEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEE-EEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 3678999999999 4677876 578888999999998 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
.+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++| +|+++|.++||++++++.
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~ 153 (156)
T 2e2c_A 88 QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQ 153 (156)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999 899999999999998764
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=6.5e-42 Score=294.30 Aligned_cols=144 Identities=30% Similarity=0.552 Sum_probs=136.4
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
+.+||++|+++| +.+.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 6 ~~~RL~kE~~~l~~~~~~~i~-~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 6 LPKRIIKETEKLVSDPVPGIT-AEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp CCHHHHHHHHHHHHSCCTTEE-EEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEE-EEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 357999999998 5788886 568889999999999 999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 226 EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 226 ~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++..
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988754
No 20
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.5e-41 Score=291.91 Aligned_cols=145 Identities=28% Similarity=0.549 Sum_probs=137.9
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
+.+||++|+++| ++|.++.+..++++|+++|+++|.|++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~ 84 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDEN 84 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCC
Confidence 568999999999 578888765788999999999888999999999999999999999999999999999999999999
Q ss_pred CcEEeccC-CCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 227 GNVCLNIL-REDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 227 G~VCL~iL-~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
|.||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++..
T Consensus 85 G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 85 GQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp CBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999 89999999999999999999999999999999999999999999999999999988754
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.3e-41 Score=301.52 Aligned_cols=147 Identities=29% Similarity=0.582 Sum_probs=138.9
Q ss_pred cchHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q psy16981 144 QTLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYH 220 (302)
Q Consensus 144 ~~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~H 220 (302)
.....+.+||++||++| ++|.+|. +.|+++|+++|+++| ||++|||+||+|+|.|.||++||++||+|+|.|+|||
T Consensus 44 ~~~s~a~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 44 KLLSTSAKRIQKELADITLDPPPNCS-AGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCTTEE-EEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred ccccHHHHHHHHHHHHHHhCCCCCce-eecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 34567889999999999 5778886 468889999999988 9999999999999999999999999999999999999
Q ss_pred ccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 221 PNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 221 PNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|||+.+|.|||++|.++|+|+++|.+||.+|++||.+||+++|+|.+||.+|++|+++|.++||+|+++++
T Consensus 123 PNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 123 CNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ceECCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998765
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-41 Score=293.82 Aligned_cols=144 Identities=28% Similarity=0.543 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCC-----CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPD-----DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~d-----dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I 218 (302)
..+.+||++||++| ++|.++. +.|.++ |+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+|
T Consensus 9 ~~~~~RL~kEl~~l~~~~p~gi~-~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRRDHPFGFY-AKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTCE-EEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEE-EEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 46789999999999 6788886 456544 899999999 99999999999999999999999999999999999
Q ss_pred ccccccCCCcEEeccCCCC--CCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 219 YHPNIDLEGNVCLNILRED--WKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 219 ~HPNId~~G~VCL~iL~e~--W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
|||||+.+|+||+++|... |+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+++++++
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999864 999999999999999999999999999999999999999999999999999875
No 23
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-41 Score=298.57 Aligned_cols=146 Identities=31% Similarity=0.533 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++||++| +.+.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGIS-AFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEE-EEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEE-EEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 45778999999999 4678886 578888999999988 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 224 DLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 224 d~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
+.+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++| +|+++|.++|+++++++.-+.
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999 999999999999999876543
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.6e-41 Score=291.64 Aligned_cols=144 Identities=24% Similarity=0.462 Sum_probs=135.0
Q ss_pred HHHHHHHHHHhccC-----CCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 148 HVCCVFLSDLNELN-----LPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 148 ~~~~Rl~kEL~eL~-----lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
.+.+||++|+++|. .+.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~i~-~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 86 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQIK-VDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHP 86 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEE-EEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEE-EEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCcc
Confidence 46789999999993 366775 467788999999999 99999999999999999999999999999999999999
Q ss_pred cccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCC
Q psy16981 222 NIDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYI 292 (302)
Q Consensus 222 NId~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v 292 (302)
||+. +|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 87 ni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 87 NISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp TBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9995 9999999999999999999999999999999999999999999999999999999999999998764
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3e-41 Score=300.65 Aligned_cols=147 Identities=28% Similarity=0.514 Sum_probs=133.3
Q ss_pred chHHHHHHHHHHHhcc--CCC-------------CCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCC
Q psy16981 145 TLFHVCCVFLSDLNEL--NLP-------------KTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHE 208 (302)
Q Consensus 145 ~l~~~~~Rl~kEL~eL--~lP-------------~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~ 208 (302)
....+.+||++||++| ++| .++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++
T Consensus 29 ~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~-v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 29 GTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVS-AQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp ---CHHHHHHHHHHHHHHC----------------CEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEE-EEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCC
Confidence 3445788999999999 444 5665 467788999999999 9999999999999999999999999
Q ss_pred CCeeeEecccccccccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q psy16981 209 PPKVKCETPVYHPNIDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAM 287 (302)
Q Consensus 209 PP~V~F~T~I~HPNId~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~ 287 (302)
||+|+|.|+||||||+. +|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+
T Consensus 108 PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t 187 (193)
T 2f4z_A 108 PPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWT 187 (193)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999995 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccCC
Q psy16981 288 RGGYI 292 (302)
Q Consensus 288 ~~~~v 292 (302)
++++.
T Consensus 188 ~~ya~ 192 (193)
T 2f4z_A 188 ETFAK 192 (193)
T ss_dssp HHHCC
T ss_pred HHHcc
Confidence 98763
No 26
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.9e-41 Score=290.95 Aligned_cols=146 Identities=29% Similarity=0.555 Sum_probs=134.6
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLE 226 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~ 226 (302)
+.+||++|+++| ++|.++..+.++++|+++|+++|.|++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 82 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEK 82 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCC
Confidence 457999999999 467788766668899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 227 GNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 227 G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
|+||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+++++++.+.
T Consensus 83 G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 83 GQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp CBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 999999997 89999999999999999999999999999999999999999999999999999987653
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.4e-41 Score=305.94 Aligned_cols=150 Identities=25% Similarity=0.533 Sum_probs=140.0
Q ss_pred chHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 145 TLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 145 ~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
....+.+||++||++| ++|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 20 ~~s~a~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 98 (216)
T 2pwq_A 20 QGSKELLRLQKELKDIENENVQEID-AHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHP 98 (216)
T ss_dssp CSCHHHHHHHHHHHHHHHSCTTTEE-EEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCEE-EEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCC
Confidence 3456789999999999 5778886 467888999999999 99999999999999999999999999999999999999
Q ss_pred cccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCc
Q psy16981 222 NIDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSV 295 (302)
Q Consensus 222 NId~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~ 295 (302)
||+. +|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|++.|.++||+|+++++....
T Consensus 99 NI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~ 173 (216)
T 2pwq_A 99 NISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPK 173 (216)
T ss_dssp TBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCc
Confidence 9995 8999999999999999999999999999999999999999999999999999999999999999887654
No 28
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=6.9e-41 Score=295.48 Aligned_cols=144 Identities=27% Similarity=0.521 Sum_probs=135.6
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++||++| ++|.++.+..++++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 7 ~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 86 (183)
T 3rz3_A 7 SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIY 86 (183)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCC
Confidence 5788999999999 67888876668899999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh------CHHHHHHHHHH
Q psy16981 225 LEGNVCLNILR-------------EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQN------NRRLFEQNVQK 285 (302)
Q Consensus 225 ~~G~VCL~iL~-------------e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~------nr~~F~~~vr~ 285 (302)
.+|+||+++|. ++|+|+++|.+||++|++||.+||+++|+|.|||.+|++ |+++|.++||+
T Consensus 87 ~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~ 166 (183)
T 3rz3_A 87 ETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRK 166 (183)
T ss_dssp TTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred CCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHH
Confidence 99999999997 889999999999999999999999999999999999999 78999999999
Q ss_pred HHHccC
Q psy16981 286 AMRGGY 291 (302)
Q Consensus 286 ~~~~~~ 291 (302)
+++++.
T Consensus 167 ~v~~s~ 172 (183)
T 3rz3_A 167 QVLGTK 172 (183)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.1e-40 Score=287.25 Aligned_cols=143 Identities=27% Similarity=0.489 Sum_probs=133.8
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCC-----CCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNP-----DDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVY 219 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~-----ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~ 219 (302)
.+.+||++|+++| ++|.++.+ .|.+ +|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||
T Consensus 4 ~a~~RL~kE~~~l~~~~~~g~~~-~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 82 (157)
T 2gjd_A 4 LCLQRLQEERKKWRKDHPFGFYA-KPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFY 82 (157)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCEE-EEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEE-EeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCc
Confidence 4678999999999 67888864 4542 4899999999 999999999999999999999999999999999999
Q ss_pred cccccCCCcEEeccCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccC
Q psy16981 220 HPNIDLEGNVCLNILRE--DWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGY 291 (302)
Q Consensus 220 HPNId~~G~VCL~iL~e--~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~ 291 (302)
||||+.+|+||+++|.. +|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+++++++
T Consensus 83 HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a 156 (157)
T 2gjd_A 83 HPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156 (157)
T ss_dssp CTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTB
T ss_pred cCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 99999999999999987 7999999999999999999999999999999999999999999999999999875
No 30
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.3e-41 Score=294.31 Aligned_cols=140 Identities=29% Similarity=0.611 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI 223 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI 223 (302)
..+.+||++||++| ++|.++.+...+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 16 ~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV 95 (172)
T 2awf_A 16 PRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNV 95 (172)
T ss_dssp CTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCC
Confidence 45678899999998 67888875444568999999988 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHH-HHHHHHHHH
Q psy16981 224 DLEGNVCLNILR-------------EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRR-LFEQNVQKA 286 (302)
Q Consensus 224 d~~G~VCL~iL~-------------e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~-~F~~~vr~~ 286 (302)
+.+|+||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.|||++|++|++ +|+++||+|
T Consensus 96 ~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 96 DKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp CTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 999999999997 689999999999999999999999999999999999999999 999999976
No 31
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.2e-40 Score=297.64 Aligned_cols=144 Identities=24% Similarity=0.468 Sum_probs=134.9
Q ss_pred HHHHHHHHHhccC-----CCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q psy16981 149 VCCVFLSDLNELN-----LPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPN 222 (302)
Q Consensus 149 ~~~Rl~kEL~eL~-----lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPN 222 (302)
+.+||++||++|. .|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 6 a~~Rl~kEl~~l~~~~~~~~~~i~-~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 6 AVQRIKREFKEVLKSEETSKNQIK-VDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp THHHHHHHHHHHHTCHHHHTTSEE-EEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEE-EEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 5789999999992 256775 567888999999999 899999999999999999999999999999999999999
Q ss_pred ccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 223 IDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 223 Id~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
|+. +|.||+++|.++|+|+++|.+||.+|++||.+||+++|+|.+||++|++|+++|.++||+|+++++.+
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 995 99999999999999999999999999999999999999999999999999999999999999887655
No 32
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-41 Score=291.66 Aligned_cols=140 Identities=26% Similarity=0.484 Sum_probs=132.0
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccc-
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNI- 223 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNI- 223 (302)
.+.+||++|+++| +.|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 23 ~a~~RL~kEl~~l~~~~~~gi~-~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 101 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKENNYKGIT-AKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVD 101 (169)
T ss_dssp HHHHHHHHHHHHHHHHCCTTEE-EEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEE-EEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCccc
Confidence 5789999999999 5778885 578889999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCC--CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHc
Q psy16981 224 DLEGNVCLNILR--EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRG 289 (302)
Q Consensus 224 d~~G~VCL~iL~--e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~ 289 (302)
+.+|+||+++|+ ++|+|+++|.+||.+|++||.+|++++|+|.|||++|++|+++|.++ ++++++
T Consensus 102 ~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 102 PHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 789999999998 89999999999999999999999999999999999999999999998 888864
No 33
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.1e-40 Score=285.66 Aligned_cols=144 Identities=30% Similarity=0.544 Sum_probs=134.3
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccC-----CCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPN-----PDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVY 219 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~-----~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~ 219 (302)
.+.+||++|+++| +.|.++.. .|. ++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~-~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 85 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVA-VPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLF 85 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEE-EEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEE-EeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcc
Confidence 4679999999999 57788864 443 36899999999 999999999999999999999999999999999999
Q ss_pred cccccCCCcEEeccCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCC
Q psy16981 220 HPNIDLEGNVCLNILRE--DWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYI 292 (302)
Q Consensus 220 HPNId~~G~VCL~iL~e--~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v 292 (302)
||||+.+|.||+++|+. +|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+++++++.
T Consensus 86 HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 86 HPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp STTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 99999999999999986 89999999999999999999999999999999999999999999999999998764
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.7e-40 Score=289.07 Aligned_cols=145 Identities=23% Similarity=0.451 Sum_probs=133.7
Q ss_pred HHHHHHHHHHhccC--C-C------CC---eEEecc-CCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeee
Q psy16981 148 HVCCVFLSDLNELN--L-P------KT---CTTEFP-NPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVK 213 (302)
Q Consensus 148 ~~~~Rl~kEL~eL~--l-P------~~---~~~~~p-~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~ 213 (302)
.+.+||++||++|. . | +. +..+.| +++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 85 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKIS 85 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEE
Confidence 56789999999983 2 2 32 445677 789999999988 999999999999999999999999999999
Q ss_pred Eec-cccccccc-CCCcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHHHHHHc
Q psy16981 214 CET-PVYHPNID-LEGNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQN-NRRLFEQNVQKAMRG 289 (302)
Q Consensus 214 F~T-~I~HPNId-~~G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~-nr~~F~~~vr~~~~~ 289 (302)
|.| +||||||+ .+|+||+++|+ ++|+|+++|.+||.+|++||.+|++++|+|.|||++|++ |+++|.++||+++++
T Consensus 86 f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~ 165 (172)
T 2y9m_A 86 FMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAE 165 (172)
T ss_dssp ECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred EeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999 99999996 69999999999 999999999999999999999999999999999999999 999999999999998
Q ss_pred cCC
Q psy16981 290 GYI 292 (302)
Q Consensus 290 ~~v 292 (302)
+..
T Consensus 166 ~~~ 168 (172)
T 2y9m_A 166 RER 168 (172)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 35
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=9.7e-41 Score=301.81 Aligned_cols=145 Identities=31% Similarity=0.532 Sum_probs=135.5
Q ss_pred HHHHHHHHHhcc--CCCCCeEEeccCC-CCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 149 VCCVFLSDLNEL--NLPKTCTTEFPNP-DDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 149 ~~~Rl~kEL~eL--~lP~~~~~~~p~~-ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
+.+||++|+++| ++|.++.+ .|.+ +++++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~-~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITL-EFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEE-CCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-EECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 468999999999 57888875 5654 4677999999 99999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 225 L-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 225 ~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
. +|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||.+|++|++.|.++||+|+++++...
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~ 152 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASET 152 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCC
Confidence 9 999999999999999999999999999999999999999999999999999999999999999988654
No 36
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=7.5e-40 Score=302.46 Aligned_cols=148 Identities=24% Similarity=0.461 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHhcc--C---CCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q psy16981 147 FHVCCVFLSDLNEL--N---LPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYH 220 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~---lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~H 220 (302)
..+.+||++||++| + .|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 56 ~~a~~RL~kEl~~l~~~~~~~~~gi~-v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 134 (253)
T 3e46_A 56 NIAVQRIKREFKEVLKSEETSKNQIK-VDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 134 (253)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEE-EEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEE-EEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCcc
Confidence 46789999999999 2 356775 567888999999999 8999999999999999999999999999999999999
Q ss_pred ccccC-CCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCc
Q psy16981 221 PNIDL-EGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSV 295 (302)
Q Consensus 221 PNId~-~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~ 295 (302)
|||+. +|.||+++|.++|+|+++|.+||.+|++||.+||+++|+|.|||++|++|++.|.++||+|+++++.+..
T Consensus 135 PNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~ 210 (253)
T 3e46_A 135 PNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 210 (253)
T ss_dssp TTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSC
T ss_pred CCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99995 9999999999999999999999999999999999999999999999999999999999999988776543
No 37
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=9.6e-41 Score=286.66 Aligned_cols=143 Identities=24% Similarity=0.485 Sum_probs=132.2
Q ss_pred HHHHHHHHhccCCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC-CC
Q psy16981 150 CCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL-EG 227 (302)
Q Consensus 150 ~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~-~G 227 (302)
.+||++||++|.. .++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|
T Consensus 4 ~~Rl~kEl~~l~~-~~~~-v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 4 LTRKQCDFTKLIM-AGYD-LELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp CCHHHHTHHHHHH-HTCC-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred HHHHHHHHHhcCc-CCCE-EEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 4688899988843 2554 456788999999999 999999999999999999999999999999999999999995 99
Q ss_pred cEEeccCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCC
Q psy16981 228 NVCLNILREDWKPVLTINSIVYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGS 294 (302)
Q Consensus 228 ~VCL~iL~e~W~P~~tI~sIL~~-Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~ 294 (302)
+||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+++++++...
T Consensus 82 ~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~ 149 (152)
T 2onu_A 82 SVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKD 149 (152)
T ss_dssp BBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGG
T ss_pred eEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999 68999999999999999999999999999999999999988654
No 38
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=291.06 Aligned_cols=144 Identities=23% Similarity=0.409 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
..+.+||++||++|. +.++.+ .|. +|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 24 ~~a~~RL~kEl~~l~-~~g~~v-~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~ 100 (179)
T 2z5d_A 24 SPGKRRMDTDVIKLI-ESKHEV-TIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDE 100 (179)
T ss_dssp CHHHHHHHHHHHHHH-HSSSCE-EEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred hHHHHHHHHHHHhcC-cCCCEE-EEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCC
Confidence 357899999999996 346654 454 6789999988 999999999999999999999999999999999999999999
Q ss_pred -CCcEEeccCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 226 -EGNVCLNILREDWKPVLTINSIVYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 226 -~G~VCL~iL~e~W~P~~tI~sIL~~-Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
+|.||+++|+++|+|+++|.+||.+ |++||.+||+++|+|.+||++|++|+++|.++||+++++++..
T Consensus 101 ~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 101 ASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp TTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred CCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999 9999999999999999999999999999999999999998764
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=4.5e-39 Score=313.75 Aligned_cols=151 Identities=30% Similarity=0.654 Sum_probs=144.2
Q ss_pred HHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNID 224 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId 224 (302)
.+.+||++|+++| ++|.++. +.|.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~-~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCS-AGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEE-EEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEE-EEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 5789999999999 5788886 578889999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCccccc
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVYFER 299 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~ 299 (302)
.+|.||+++|.++|+|+++|.+||.+|++||.+||+++|+|.+||++|++|++.|.++||+|++++...+..+|.
T Consensus 82 ~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~v~~De 156 (399)
T 4ddg_A 82 SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGGSAYDE 156 (399)
T ss_dssp TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCTTHHHH
T ss_pred CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccccchhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887764
No 40
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-39 Score=281.06 Aligned_cols=142 Identities=24% Similarity=0.465 Sum_probs=130.1
Q ss_pred HHHHHHHHHHhccC-CCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q psy16981 148 HVCCVFLSDLNELN-LPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDL 225 (302)
Q Consensus 148 ~~~~Rl~kEL~eL~-lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~ 225 (302)
.+.+||++|+++|. .|.++ +.++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~~v----~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTRKV----YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSSCE----EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCCCC----CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 44589999999983 34332 3578999999999 999999999999999999999999999999999999999995
Q ss_pred -CCcEEeccCCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCC
Q psy16981 226 -EGNVCLNILREDWKPVLTINSIVYGL-QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIG 293 (302)
Q Consensus 226 -~G~VCL~iL~e~W~P~~tI~sIL~~I-q~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~ 293 (302)
+|+||+++|+++|+|+++|.+||.+| ++||.+|++++|+|.+||.+|++|++.|.++||+++++++..
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999997 799999999999999999999999999999999999987753
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=3.1e-37 Score=268.27 Aligned_cols=135 Identities=26% Similarity=0.498 Sum_probs=121.3
Q ss_pred HHHHHHHHhcc--CC------------CCCeEEeccCCCCceEEEEEE-eCCCcccC--CcEEEEEEEeCCCCCCCCCee
Q psy16981 150 CCVFLSDLNEL--NL------------PKTCTTEFPNPDDLLSFKLII-SPDEGFYR--SGKFVFSFKVGPNYPHEPPKV 212 (302)
Q Consensus 150 ~~Rl~kEL~eL--~l------------P~~~~~~~p~~ddl~~W~v~I-gP~~tpYe--GG~F~f~I~fp~~YP~~PP~V 212 (302)
.+||++|+++| ++ +.++. +.++++|+++|+++| ||++|+|+ ||.|+|+|.||++||++||+|
T Consensus 10 ~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~-~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 10 NKRIIKDLKLLLEEVDANNEANSSGSPHSTAI-FSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC----CCSSCEE-EEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHhCcccccccccccCCCCcEE-EEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 46777777777 23 44554 578899999999999 89999999 999999999999999999999
Q ss_pred eEecccccccccCCCcEEeccCCCCCCCcCCHHHHHH-HHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHHH
Q psy16981 213 KCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVY-GLQYLFLE--PNPEDPLNKEAAEVLQNNRRLFEQNVQK 285 (302)
Q Consensus 213 ~F~T~I~HPNId~~G~VCL~iL~e~W~P~~tI~sIL~-~Iq~Ll~~--Pn~~dPlN~eAA~~~~~nr~~F~~~vr~ 285 (302)
+|.|+||||||+.+|.||+++|.++|+|+++|.++|+ .|++|+.+ |++++|+|.|||++|++|+++|+++||+
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999999999999999765 57788875 8999999999999999999999999983
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.3e-36 Score=262.45 Aligned_cols=130 Identities=22% Similarity=0.374 Sum_probs=115.0
Q ss_pred chHHHHHHHHHHHhcc--C-CCCCeEEeccCCC--CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccc
Q psy16981 145 TLFHVCCVFLSDLNEL--N-LPKTCTTEFPNPD--DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV 218 (302)
Q Consensus 145 ~l~~~~~Rl~kEL~eL--~-lP~~~~~~~p~~d--dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I 218 (302)
....+.+||++||++| + ++.++.+...+++ |+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+|
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 18 GIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp SCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccc
Confidence 3345678999999999 3 5677765544433 599999999 89999999999999999999999999999999999
Q ss_pred ccccccCCCcE---EeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q psy16981 219 YHPNIDLEGNV---CLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNN 275 (302)
Q Consensus 219 ~HPNId~~G~V---CL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~n 275 (302)
|||||+.+|+| |+++|+ +|+|+++|.+||.+|++||.+|++++|+|++||++|++|
T Consensus 98 ~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred ccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999 899998 599999999999999999999999999999999998775
No 43
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.5e-35 Score=253.89 Aligned_cols=124 Identities=20% Similarity=0.376 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHhcc--CCCCC-eEEeccCCCC--ceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q psy16981 146 LFHVCCVFLSDLNEL--NLPKT-CTTEFPNPDD--LLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVY 219 (302)
Q Consensus 146 l~~~~~Rl~kEL~eL--~lP~~-~~~~~p~~dd--l~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~ 219 (302)
...+.+||++||++| ++|.+ +.+..++++| +++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||
T Consensus 23 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred echHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 356789999999999 45666 5444346665 99999999 899999999999999999999999999999999999
Q ss_pred ccccc-CCCcEEeccCC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q psy16981 220 HPNID-LEGNVCLNILR--EDWKPVLTINSIVYGLQYLFL-EPNPEDPLNKEAA 269 (302)
Q Consensus 220 HPNId-~~G~VCL~iL~--e~W~P~~tI~sIL~~Iq~Ll~-~Pn~~dPlN~eAA 269 (302)
||||+ .+|+||+++|. ++|+|+++|.+||.+|++||. +||+++|+|.|||
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999 59999999998 899999999999999999995 6999999999998
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6.4e-35 Score=242.65 Aligned_cols=114 Identities=19% Similarity=0.415 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccc-cccc
Q psy16981 147 FHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV-YHPN 222 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I-~HPN 222 (302)
..+.+||++|+++| ++|.++.+ .++++|+++|+++| ||++|||+||.|+|+|.||++||++||+|+|.|++ ||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~-~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTL-DVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEE-EECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 45678999999999 67888864 57889999999988 99999999999999999999999999999999996 9999
Q ss_pred ccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCC
Q psy16981 223 IDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPE 261 (302)
Q Consensus 223 Id~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~ 261 (302)
|+.+|+||+++|+++|+|+++|.+||.+|++||.+|+.+
T Consensus 84 v~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999865
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=6.3e-35 Score=277.45 Aligned_cols=150 Identities=25% Similarity=0.419 Sum_probs=134.8
Q ss_pred cchHHHHHHHHHHHhcc--CCCCCeE---EeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecc
Q psy16981 144 QTLFHVCCVFLSDLNEL--NLPKTCT---TEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETP 217 (302)
Q Consensus 144 ~~l~~~~~Rl~kEL~eL--~lP~~~~---~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~ 217 (302)
.....+.+||++|+++| ++|.++. .+.++++|++.|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 72 ~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 72 ANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 34467889999999999 4666542 2457889999999988 9999999999999999999999999999999998
Q ss_pred -----cccccccCCCcEEeccCC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCCccHHH--HHHHHhCHHHHH
Q psy16981 218 -----VYHPNIDLEGNVCLNILR-------EDWKPVL-TINSIVYGLQYLFL--EPNPEDPLNKEA--AEVLQNNRRLFE 280 (302)
Q Consensus 218 -----I~HPNId~~G~VCL~iL~-------e~W~P~~-tI~sIL~~Iq~Ll~--~Pn~~dPlN~eA--A~~~~~nr~~F~ 280 (302)
|||||||.+|+|||++|+ ++|+|++ +|.+||++|++||. +|++++|+|.+| +.++.+|++.|.
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~ 231 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYD 231 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHH
T ss_pred CCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHH
Confidence 999999999999999997 6999999 89999999999996 777899999987 578999999999
Q ss_pred HHHHHHHHccCCC
Q psy16981 281 QNVQKAMRGGYIG 293 (302)
Q Consensus 281 ~~vr~~~~~~~v~ 293 (302)
++|++++.++++.
T Consensus 232 ~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 232 GNIRQATVKWAML 244 (323)
T ss_dssp HHHHHHHHHHTTH
T ss_pred HHHHHHHHHHhhH
Confidence 9999999987653
No 46
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=8.7e-36 Score=251.78 Aligned_cols=124 Identities=23% Similarity=0.461 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhcc--C-CCCCeEEeccCCC--CceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 148 HVCCVFLSDLNEL--N-LPKTCTTEFPNPD--DLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~-lP~~~~~~~p~~d--dl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
.+.+||++|+++| + .+.++.+...+++ |+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 85 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLP 85 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccC
Confidence 3458999999999 3 4677765443434 599999988 89999999999999999999999999999999999999
Q ss_pred cccCC-CcE--EeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHH
Q psy16981 222 NIDLE-GNV--CLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVL 272 (302)
Q Consensus 222 NId~~-G~V--CL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~ 272 (302)
||+.+ |+| |+++|+ +|+|+++|.+||.+|++||.+||+++|+|++||++|
T Consensus 86 nv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 86 CVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp TBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99996 999 999987 899999999999999999999999999999998654
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-34 Score=242.53 Aligned_cols=117 Identities=21% Similarity=0.416 Sum_probs=107.9
Q ss_pred ccchHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccc-
Q psy16981 143 TQTLFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPV- 218 (302)
Q Consensus 143 ~~~l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I- 218 (302)
..+...+.+||++|+++| ++|.++.+ .++++|+++|+++| ||++|||+||.|+|+|.||++||++||+|+|.|++
T Consensus 15 ~~~~~~~~~RL~kEl~~l~~~~~~~~~~-~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 93 (136)
T 2h2y_A 15 KYNLGNANYRIQKELNNFLKNPPINCTI-DVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPP 93 (136)
T ss_dssp CCCTTSHHHHHHHHHHHHHHSCCTTEEE-EECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCC
T ss_pred hccchHHHHHHHHHHHHHHhCCCCCeEE-EeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCC
Confidence 334556789999999999 67888864 57889999999988 99999999999999999999999999999999996
Q ss_pred ccccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCC
Q psy16981 219 YHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNP 260 (302)
Q Consensus 219 ~HPNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~ 260 (302)
|||||+.+|+||+++|+++|+|+++|.+||.+|++||.+|+.
T Consensus 94 ~HPnv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 94 KHTHVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CCTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCcCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999999999999999999874
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=254.21 Aligned_cols=122 Identities=20% Similarity=0.388 Sum_probs=110.3
Q ss_pred HHHHHHHHHHhcc--CCCCC-eEEeccCCCC--ceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q psy16981 148 HVCCVFLSDLNEL--NLPKT-CTTEFPNPDD--LLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHP 221 (302)
Q Consensus 148 ~~~~Rl~kEL~eL--~lP~~-~~~~~p~~dd--l~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HP 221 (302)
.+.+||++||++| +++.+ +.+..++++| +++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HP 114 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMN 114 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccC
Confidence 4678999999999 46667 4443346665 99999999 89999999999999999999999999999999999999
Q ss_pred ccc-CCCcEEeccCC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q psy16981 222 NID-LEGNVCLNILR--EDWKPVLTINSIVYGLQYLFL-EPNPEDPLNKEAA 269 (302)
Q Consensus 222 NId-~~G~VCL~iL~--e~W~P~~tI~sIL~~Iq~Ll~-~Pn~~dPlN~eAA 269 (302)
||+ .+|+||+++|. ++|+|+++|.+||.+|++||. +||+++|+|.|||
T Consensus 115 NV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 115 GVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 999 69999999998 899999999999999999997 5999999999997
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7e-33 Score=234.15 Aligned_cols=106 Identities=25% Similarity=0.502 Sum_probs=99.6
Q ss_pred HHHHHHHhcc--CCCCCeEEe-ccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccc--ccccc
Q psy16981 151 CVFLSDLNEL--NLPKTCTTE-FPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVY--HPNID 224 (302)
Q Consensus 151 ~Rl~kEL~eL--~lP~~~~~~-~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~--HPNId 224 (302)
+||++||++| ++|.++.+. .|+++|+++|+++| ||++|||+||.|+|+|.||++||++||+|+|.|++| ||||+
T Consensus 25 ~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~ 104 (136)
T 2a7l_A 25 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVY 104 (136)
T ss_dssp HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCC
Confidence 8999999999 678888642 47889999999998 999999999999999999999999999999999999 99999
Q ss_pred CCCcEEeccCCCCCCCcCCHHHHHHHHHHhhc
Q psy16981 225 LEGNVCLNILREDWKPVLTINSIVYGLQYLFL 256 (302)
Q Consensus 225 ~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~ 256 (302)
.+|+||+++|+++|+|+++|.+||.+|++||.
T Consensus 105 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 105 SNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99999999999999999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=5.4e-33 Score=246.09 Aligned_cols=148 Identities=17% Similarity=0.306 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHhcc--CCCCCeEEeccCCCCceEEEEEE-eCCCcccCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q psy16981 146 LFHVCCVFLSDLNEL--NLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPN 222 (302)
Q Consensus 146 l~~~~~Rl~kEL~eL--~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPN 222 (302)
...+.+||++||++| ++|.++. +.|+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+ |||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~-~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~ 88 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYIC-AEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGR 88 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEE-EEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSS
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEE-EEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cce
Confidence 345789999999999 5777876 468889999999998 9999999999999999999999999999999999 999
Q ss_pred ccCCCcEEeccC---CCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHccCCCCccccc
Q psy16981 223 IDLEGNVCLNIL---REDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKAMRGGYIGSVYFER 299 (302)
Q Consensus 223 Id~~G~VCL~iL---~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~~~~~~v~~~~f~~ 299 (302)
|+.+|+|||++| .++|+|+++|.+||.+|++||.+|+++... + ......++.|.+.++.+..+..+....|+.
T Consensus 89 ~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~---~-~~~~~~r~~~a~~s~~~~~~~~~f~~~fp~ 164 (187)
T 2f4w_A 89 FKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGS---I-ETSDFTKRQLAVQSLAFNLKDKVFCELFPE 164 (187)
T ss_dssp BCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTB---C-CCCHHHHHHHHHHHHHHHHTCHHHHHHCHH
T ss_pred eccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcc---c-ccChHHHHHHHHHHHHHhhcCchHHHhhHH
Confidence 999999999999 689999999999999999999999987431 1 111234666777777777666555555554
Q ss_pred c
Q psy16981 300 C 300 (302)
Q Consensus 300 ~ 300 (302)
+
T Consensus 165 ~ 165 (187)
T 2f4w_A 165 V 165 (187)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=2.5e-32 Score=241.70 Aligned_cols=136 Identities=14% Similarity=0.307 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHhccC--C---CCCeEEeccCCCCceEEEEEE-eC-CCcccCC-----------cEEEEEEEeCCCCCCC
Q psy16981 147 FHVCCVFLSDLNELN--L---PKTCTTEFPNPDDLLSFKLII-SP-DEGFYRS-----------GKFVFSFKVGPNYPHE 208 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~--l---P~~~~~~~p~~ddl~~W~v~I-gP-~~tpYeG-----------G~F~f~I~fp~~YP~~ 208 (302)
..+.+||++||++|. + +.++. +.|.++|+++|+++| || ++|||+| |.|+|+|.||++||++
T Consensus 26 ~~a~~RL~kEl~~l~~~~~~~~~~~~-~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 26 VQASDRLMKELRDIYRSQSYKTGIYS-VELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHTTSEE-EEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEE-EEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 467899999999993 3 45565 567889999999999 87 8999998 8999999999999999
Q ss_pred CCeeeEecccccc-cccCCCcEEeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q psy16981 209 PPKVKCETPVYHP-NIDLEGNVCLNILR-EDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQKA 286 (302)
Q Consensus 209 PP~V~F~T~I~HP-NId~~G~VCL~iL~-e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~~nr~~F~~~vr~~ 286 (302)
||+|+|.|++||| ||+.+|.||+++|. ++|+|+++|.+||.+|++||.+|++.. .++.++.+|.+.++++
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~ 176 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQ 176 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHH
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHH
Confidence 9999999999999 69999999999997 799999999999999999999986543 3455567777777766
Q ss_pred HHccC
Q psy16981 287 MRGGY 291 (302)
Q Consensus 287 ~~~~~ 291 (302)
+.++.
T Consensus 177 ~~~~~ 181 (186)
T 1zuo_A 177 SYNSI 181 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.84 E-value=1.8e-22 Score=175.31 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEE-eCCCcccCCc----------EEEEEEEeCCCCCCCCCeeeEe
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSG----------KFVFSFKVGPNYPHEPPKVKCE 215 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG----------~F~f~I~fp~~YP~~PP~V~F~ 215 (302)
....+||++|++.|.. .+.|+.+|++.|.++| ||++|+|+|| .|.++|.||++||++||+|+|.
T Consensus 31 ~~w~~RL~eE~k~L~k-----~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 31 ELWVQRLKEEYQSLIR-----YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHHHH-----HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHHH-----HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 4567899999988743 2467778999999988 9999999999 9999999999999999999999
Q ss_pred cc-cccccccCCCcEEeccC-CC---CCCCcCCHHHHHH
Q psy16981 216 TP-VYHPNIDLEGNVCLNIL-RE---DWKPVLTINSIVY 249 (302)
Q Consensus 216 T~-I~HPNId~~G~VCL~iL-~e---~W~P~~tI~sIL~ 249 (302)
+. +||||||.+|+|||||| .. .|+|.++|.++|.
T Consensus 106 ~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 106 ELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 98 99999999999999999 43 4569999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.69 E-value=3.3e-17 Score=142.12 Aligned_cols=91 Identities=23% Similarity=0.330 Sum_probs=75.2
Q ss_pred cCCCCceEEEEEE-eCCCcccCCcE---EEEEEEeCCCCCCCCCeeeEec-------c---cc-cccccCCCcEEeccCC
Q psy16981 171 PNPDDLLSFKLII-SPDEGFYRSGK---FVFSFKVGPNYPHEPPKVKCET-------P---VY-HPNIDLEGNVCLNILR 235 (302)
Q Consensus 171 p~~ddl~~W~v~I-gP~~tpYeGG~---F~f~I~fp~~YP~~PP~V~F~T-------~---I~-HPNId~~G~VCL~iL~ 235 (302)
..+|....+-+.+ |.-..+|+||. |.+.|.||.+||++||.|.|.+ + |+ |||||.+|+||+++|.
T Consensus 55 t~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~ 134 (162)
T 3r3q_A 55 THSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH 134 (162)
T ss_dssp ECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG
T ss_pred EcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc
Confidence 3444433344434 44447899999 8899999999999999998865 1 78 9999999999999995
Q ss_pred CCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q psy16981 236 EDWKP-VLTINSIVYGLQYLFLEPNPED 262 (302)
Q Consensus 236 e~W~P-~~tI~sIL~~Iq~Ll~~Pn~~d 262 (302)
+|+| +.+|.++|.+|+++|.+|+++.
T Consensus 135 -~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 135 -AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp -SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred -cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 6999 5799999999999999999985
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.41 E-value=1.5e-14 Score=123.45 Aligned_cols=88 Identities=15% Similarity=0.236 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhccCCCCCeEEeccCCCCceEEEEEE-eCCCcccCCc----------EEEEEEEeCCCCCCCCCeeeEe
Q psy16981 147 FHVCCVFLSDLNELNLPKTCTTEFPNPDDLLSFKLII-SPDEGFYRSG----------KFVFSFKVGPNYPHEPPKVKCE 215 (302)
Q Consensus 147 ~~~~~Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~I-gP~~tpYeGG----------~F~f~I~fp~~YP~~PP~V~F~ 215 (302)
.....||..|+..| +..+.-+.++=..|...+ +|+||+|+|+ .|++.|.||.+||..||.|+|.
T Consensus 33 ~~w~~RlkeEy~al-----I~yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 33 DKWTARLKEEYASL-----ITYVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH-----HHHHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 34667788887774 111111211122377767 8999999999 9999999999999999999999
Q ss_pred cc-cccccccCCCcEEeccCCCCCCCcC
Q psy16981 216 TP-VYHPNIDLEGNVCLNILREDWKPVL 242 (302)
Q Consensus 216 T~-I~HPNId~~G~VCL~iL~e~W~P~~ 242 (302)
+. .+|||+|.+|+|||+++ |+|.+
T Consensus 108 ~ldgkt~kmYr~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTTH---FFPLW 132 (168)
T ss_dssp GGTTTCSSEETTTEECCCTT---HHHHH
T ss_pred cccCcCccccCCCcEEeccc---cchhh
Confidence 95 89999999999999996 77765
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.36 E-value=8.9e-13 Score=112.50 Aligned_cols=80 Identities=21% Similarity=0.395 Sum_probs=71.0
Q ss_pred CCCceEEEEEEeCCCcccCCcEEEE--EEEeCCCCCCCCCeeeEecc------cccccccCCCcEEeccCCCCCCC-cCC
Q psy16981 173 PDDLLSFKLIISPDEGFYRSGKFVF--SFKVGPNYPHEPPKVKCETP------VYHPNIDLEGNVCLNILREDWKP-VLT 243 (302)
Q Consensus 173 ~ddl~~W~v~IgP~~tpYeGG~F~f--~I~fp~~YP~~PP~V~F~T~------I~HPNId~~G~VCL~iL~e~W~P-~~t 243 (302)
..+++.|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ .+|||||.+|+||+++|.+ |++ ..+
T Consensus 50 ~~~LL~l~GtIp---v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~sn 124 (146)
T 3obq_A 50 SRELMNLTGTIP---VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQSD 124 (146)
T ss_dssp TCEEEEEEEEEE---EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTCC
T ss_pred hheEEEEEEEee---eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCCC
Confidence 457999999997 6799999985 999999999999999 6655 5899999999999999975 988 779
Q ss_pred HHHHHHHHHHhhcC
Q psy16981 244 INSIVYGLQYLFLE 257 (302)
Q Consensus 244 I~sIL~~Iq~Ll~~ 257 (302)
|.++|..|+.+|.+
T Consensus 125 L~~ll~~l~~~F~~ 138 (146)
T 3obq_A 125 LLGLIQVMIVVFGD 138 (146)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999964
No 56
>1tt5_E Ubiquitin-conjugating enzyme E2 M; cell cycle, ligase; 2.60A {Homo sapiens}
Probab=97.76 E-value=3e-06 Score=51.65 Aligned_cols=21 Identities=62% Similarity=0.776 Sum_probs=16.9
Q ss_pred HHhhhhhccccccCCCCCCCC
Q psy16981 33 MIKLFSLKQQKKDGENPARPG 53 (302)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~ 53 (302)
||||||||++|++++.++..+
T Consensus 1 MIkLFSlK~kk~~e~~~~as~ 21 (26)
T 1tt5_E 1 MIKLFSLKQQKKEEESAGGTK 21 (26)
T ss_pred CcchhhhhHHHHHhhcccccC
Confidence 899999999997776665543
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=92.00 E-value=0.7 Score=37.41 Aligned_cols=41 Identities=15% Similarity=0.374 Sum_probs=29.7
Q ss_pred ceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEec
Q psy16981 176 LLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 176 l~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
...+.+.|.+..+.-..-.+.+.|.+|++||..||.|...+
T Consensus 45 ~~~f~I~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDKEPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSCSSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCCCCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 45677777654332123478899999999999999998654
No 58
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.91 E-value=0.51 Score=37.70 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=27.9
Q ss_pred ceEEEEEEeCCCc-ccCCcEEEEEEEeCCCCCCCCCeeeEec
Q psy16981 176 LLSFKLIISPDEG-FYRSGKFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 176 l~~W~v~IgP~~t-pYeGG~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
...+.+.|.+..+ .-+.-.+.+.|.+|++||.+||.|....
T Consensus 37 ~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 37 PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3556666643321 1223468899999999999999987643
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.67 E-value=1.1 Score=35.81 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=28.8
Q ss_pred ceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEe
Q psy16981 176 LLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCE 215 (302)
Q Consensus 176 l~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~ 215 (302)
...+.+.|.+.+..=..-.+.+.|.+|++||..||.|...
T Consensus 39 ~~~f~i~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 39 GTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECCTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred CCeEEEEecCCCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4577777765432111247899999999999999998754
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.36 E-value=2.7 Score=35.02 Aligned_cols=66 Identities=15% Similarity=0.066 Sum_probs=40.1
Q ss_pred EEEEEEEeCCCCCCCCCeeeEecccccccccCCCcEEeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCccHHHHHHHH
Q psy16981 194 KFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYLFLEPNPEDPLNKEAAEVLQ 273 (302)
Q Consensus 194 ~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~VCL~iL~e~W~P~~tI~sIL~~Iq~Ll~~Pn~~dPlN~eAA~~~~ 273 (302)
.+.+.|.+|.+||..+|.|...+. |-.......+...|...+.+-+..++.=-.+...++
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~--------------------~l~~~~~~~L~~~L~~~l~~~~lG~~mif~lve~lq 135 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS--------------------ELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQ 135 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS--------------------SSCHHHHHHHHHHHHHHHTTSCTTSCSHHHHHHHHH
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC--------------------CCCHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 799999999999999999985442 211122334444555555443445555555555555
Q ss_pred hCHHHH
Q psy16981 274 NNRRLF 279 (302)
Q Consensus 274 ~nr~~F 279 (302)
++-..|
T Consensus 136 e~~~~~ 141 (154)
T 2daw_A 136 DNSASY 141 (154)
T ss_dssp HTTHHH
T ss_pred HHHHHH
Confidence 554443
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=85.56 E-value=2.5 Score=34.87 Aligned_cols=23 Identities=17% Similarity=0.382 Sum_probs=20.4
Q ss_pred EEEEEEEeCCCCCCCCCeeeEec
Q psy16981 194 KFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 194 ~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 58899999999999999998655
No 62
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=84.95 E-value=2.2 Score=33.93 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=21.2
Q ss_pred cEEEEEEEeCCCCCCCCCeeeEec
Q psy16981 193 GKFVFSFKVGPNYPHEPPKVKCET 216 (302)
Q Consensus 193 G~F~f~I~fp~~YP~~PP~V~F~T 216 (302)
-.+.+.|.+|++||..+|.|...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 468899999999999999998765
No 63
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=83.60 E-value=0.41 Score=40.52 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=39.1
Q ss_pred cccccchhhhhhhhccccC----CC-------CCC-----ccccccceecccCCcccccccccccccCC
Q psy16981 55 QQKKASAAQLRITKAELEL----PT-------YSG-----SVLLHQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 55 ~~~~~s~~~~r~~~~~~~~----p~-------~~~-----~~~~~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
...++|+++.||+||--+| |. ..+ .+.+.+..+-|.||.|.+.+.+..+||..
T Consensus 8 ~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~ 76 (167)
T 3fn1_B 8 STRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMV 76 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEECCSSSTTTTCCEEEEEECCTTBTTB
T ss_pred CccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEECCCCCccCCCEEEEEEECCCCCCCC
Confidence 4467889999999864332 22 222 34456778899999999999999999964
No 64
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=82.57 E-value=0.57 Score=39.54 Aligned_cols=50 Identities=32% Similarity=0.408 Sum_probs=35.3
Q ss_pred ccchhhhhhhhccccC--CCC-------CC-----ccccccceecccCCcccccccccccccCC
Q psy16981 58 KASAAQLRITKAELEL--PTY-------SG-----SVLLHQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 58 ~~s~~~~r~~~~~~~~--p~~-------~~-----~~~~~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
|.|++..||+||--+| |+. .+ .+++.|..+-|.||.|.+.+.+..+||..
T Consensus 3 ~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~ 66 (160)
T 1y8x_A 3 MASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHD 66 (160)
T ss_dssp SCCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEECCSSSTTTTBCEEEEEECCTTTTTS
T ss_pred cccHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEECCCCCCCCCCEEEEEEeCCCcCCCC
Confidence 4566777777754332 211 11 34567888999999999999999999953
No 65
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=81.70 E-value=0.59 Score=38.37 Aligned_cols=51 Identities=18% Similarity=0.068 Sum_probs=36.3
Q ss_pred cccchhhhhhhhccccC----CCCC------C-----cccc-ccceecccCCcccccccccccccCC
Q psy16981 57 KKASAAQLRITKAELEL----PTYS------G-----SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 57 ~~~s~~~~r~~~~~~~~----p~~~------~-----~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.+.++|..||+||--++ |..+ + .+.| -|..+-|.||.|.+.+.+..+||..
T Consensus 16 ~~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~ 82 (136)
T 2h2y_A 16 YNLGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLK 82 (136)
T ss_dssp CCTTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCC
Confidence 35667788888754322 2221 1 3344 4888999999999999999999965
No 66
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=79.09 E-value=1.1 Score=36.12 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=26.8
Q ss_pred eEEEEEEeCCCc--ccCCcEEEEEEEeCCCCCCCCCeeeEe
Q psy16981 177 LSFKLIISPDEG--FYRSGKFVFSFKVGPNYPHEPPKVKCE 215 (302)
Q Consensus 177 ~~W~v~IgP~~t--pYeGG~F~f~I~fp~~YP~~PP~V~F~ 215 (302)
..+.+.|.+.+. .-..-.+.+.|.||++||..+|.|...
T Consensus 45 ~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 45 PEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred cEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 456666654321 001236889999999999999999864
No 67
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=74.42 E-value=7.9 Score=33.76 Aligned_cols=82 Identities=20% Similarity=0.361 Sum_probs=54.4
Q ss_pred HHHHHHhccCCCCCeEEeccCCCCceEEEEEEeCCCcccCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCCcEEe
Q psy16981 152 VFLSDLNELNLPKTCTTEFPNPDDLLSFKLIISPDEGFYRSGKFVFSFKVGPNYPHEPPKVKCETPVYHPNIDLEGNVCL 231 (302)
Q Consensus 152 Rl~kEL~eL~lP~~~~~~~p~~ddl~~W~v~IgP~~tpYeGG~F~f~I~fp~~YP~~PP~V~F~T~I~HPNId~~G~VCL 231 (302)
++.+||.++.=-.-.. - ++++...++.+... .|-...++|.++.+||.++|.+...-|+ |
T Consensus 5 ~li~Ei~~iGW~~l~~---i-d~~~~~i~l~~~D~----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~---------- 64 (186)
T 3zqs_A 5 SLIEEIGTLGWDKLVY---A-DTCFSTIKLKAEDA----SGREHLITLKLKAKYPAESPDYFVDFPV--P---------- 64 (186)
T ss_dssp SHHHHHHHHCGGGEEE---E-CTTSSEEEEEEECT----TSCEEEEEEECCTTTTTSCCEEECCCSS--C----------
T ss_pred HHHHHHHHhCCceeee---e-cCCccEEEEEEEeC----CCCeEEEEEEECCCCCCCCCeeEEcCCC--C----------
Confidence 4556776642111111 1 35677788777432 3567889999999999999988755442 1
Q ss_pred ccCCCCCCCcCCHHHHHHHHHHhh
Q psy16981 232 NILREDWKPVLTINSIVYGLQYLF 255 (302)
Q Consensus 232 ~iL~e~W~P~~tI~sIL~~Iq~Ll 255 (302)
+.-.|.|..++.+++...+..+
T Consensus 65 --~~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 65 --FCASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHHH
T ss_pred --cccccCCCccHHHHHHHHHHHH
Confidence 1136999999998888776655
No 68
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=74.29 E-value=0.73 Score=39.94 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=34.5
Q ss_pred cccchhhhhhhhccccC----CCCC------C-----cccc-ccceecccCCcccccccccccccCC
Q psy16981 57 KKASAAQLRITKAELEL----PTYS------G-----SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 57 ~~~s~~~~r~~~~~~~~----p~~~------~-----~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
++.+++..||+||-.+| |+.. + ...| -|..+.|.||.|.+.+.+..+||..
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~ 76 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFK 76 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCC
Confidence 45677888888855332 3222 1 3444 4888999999999999999999965
No 69
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=69.46 E-value=1 Score=36.32 Aligned_cols=25 Identities=8% Similarity=-0.083 Sum_probs=22.8
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+++..+||..
T Consensus 44 GP~~tpYegg~f~~~i~fp~~YP~~ 68 (125)
T 2fo3_A 44 GLENTIYANEVYKLKIIFPDDYPLK 68 (125)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCCEEEEEEEcCCCCCCC
Confidence 4788999999999999999999965
No 70
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=67.30 E-value=1.1 Score=39.21 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=36.1
Q ss_pred ccchhhhhhhhccccC----CCCCC-----------cccc-ccceecccCCcccccccccccccCC
Q psy16981 58 KASAAQLRITKAELEL----PTYSG-----------SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 58 ~~s~~~~r~~~~~~~~----p~~~~-----------~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
+.+++..||+||--+| |..+. ...| -|..+.|.||.|.|.+.+..+||..
T Consensus 45 ~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 110 (194)
T 3bzh_A 45 LLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFK 110 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred cccHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCC
Confidence 3477889999865333 33221 2333 5778899999999999999999964
No 71
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=66.94 E-value=1.6 Score=36.61 Aligned_cols=28 Identities=4% Similarity=-0.121 Sum_probs=24.1
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
+.| -|..+-|.||.|.+.+.+..+||..
T Consensus 38 ~~I~Gp~~tpyegg~f~~~i~fp~~YP~~ 66 (164)
T 3h8k_A 38 ALIMGPEDTCFEFGVFPAILSFPLDYPLS 66 (164)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEeCCCCCCCCCCEEEEEEECCCCCCCC
Confidence 344 4888899999999999999999965
No 72
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=66.91 E-value=1.4 Score=36.65 Aligned_cols=29 Identities=7% Similarity=0.102 Sum_probs=24.4
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
...| -+..+-|.||.|.+.+++..+||..
T Consensus 37 ~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 66 (151)
T 4gpr_A 37 TATITGPDDSPYQGGLFFLDVHFPVDYPFK 66 (151)
T ss_dssp EEEEECCSSSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEEeCCCCCCcCCCEEEEEEECCCCCCCC
Confidence 3444 3888999999999999999999954
No 73
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=63.50 E-value=1.8 Score=36.63 Aligned_cols=29 Identities=7% Similarity=0.041 Sum_probs=24.5
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.+.| -|..+-|.||.|.+.+.+..+||..
T Consensus 54 ~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 83 (166)
T 2ayv_A 54 QATIMGPEDSPYSGGVFFLNIHFPSDYPFK 83 (166)
T ss_dssp EEEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred eEEEECCCCCCcCCCEEEEEEeCCCcCCCC
Confidence 3444 4888999999999999999999964
No 74
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=62.45 E-value=1.9 Score=36.68 Aligned_cols=29 Identities=7% Similarity=0.027 Sum_probs=24.3
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.+.| -+..+.|.||.|.|.+++..+||..
T Consensus 56 ~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 85 (169)
T 1yrv_A 56 EVEIEGLQNSVWQGLVFQLTIHFTSEYNYA 85 (169)
T ss_dssp EEEEECCTTSTTTTCEEEEEEECCTTBTTB
T ss_pred eeEEECCCCCCccceEEEEEEECCccCCCC
Confidence 3444 4788999999999999999999964
No 75
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=61.15 E-value=3.6 Score=34.08 Aligned_cols=28 Identities=7% Similarity=-0.086 Sum_probs=24.1
Q ss_pred cccccceecccCCcccccccccccccCC
Q psy16981 80 VLLHQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..|.|..+-|.||.|.+.+.+..+||..
T Consensus 37 ~~i~P~~tpyegg~f~~~i~fp~~YP~~ 64 (154)
T 1c4z_D 37 GLIVPDNPPYDKGAFRIEINFPAEYPFK 64 (154)
T ss_dssp EEECCCSSSCCSCCEEEEEECCTTTTTS
T ss_pred EEEeCCCCCccCCeEEEEEEeCCCCCCC
Confidence 3445888999999999999999999965
No 76
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=60.75 E-value=2.4 Score=35.27 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 47 Gp~~tpyegg~f~~~i~fp~~YP~~ 71 (156)
T 2e2c_A 47 GPKDTVYESLKYKLTLEFPSDYPYK 71 (156)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred CCCCCCcCCcEEEEEEECCCCCCCC
Confidence 4788899999999999999999964
No 77
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=59.37 E-value=1.3 Score=36.86 Aligned_cols=29 Identities=10% Similarity=0.049 Sum_probs=24.3
Q ss_pred cccc-ccceecccCCcccccccccccccCC
Q psy16981 79 SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.+.| -|..+-|.||.|.+.+.+..+||..
T Consensus 32 ~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 61 (152)
T 2onu_A 32 DVMFHGPNGTAYEGGIWKVHVTLPDDYPFA 61 (152)
T ss_dssp EEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred EEEEECCCCCcccceEEEEEEcCcccCCCC
Confidence 3444 5788999999999999999999964
No 78
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=57.95 E-value=2.5 Score=36.35 Aligned_cols=49 Identities=10% Similarity=0.032 Sum_probs=33.4
Q ss_pred cchhhhhhhhccccC----CCCC------C-----cccc-ccceecccCCcccccccccccccCC
Q psy16981 59 ASAAQLRITKAELEL----PTYS------G-----SVLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 59 ~s~~~~r~~~~~~~~----p~~~------~-----~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.+++..||+||--+| |... + ...| -|..+.|.||.|.|.+.+..+||..
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 92 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYN 92 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTS
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCC
Confidence 466778888864332 2222 1 2333 5778999999999999999999964
No 79
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=57.67 E-value=2.5 Score=35.73 Aligned_cols=28 Identities=7% Similarity=0.061 Sum_probs=24.0
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|..+-|.||.|.|.+.+..+||..
T Consensus 53 ~~I~GP~~TpYegg~f~l~i~fp~~YP~~ 81 (165)
T 2c4o_A 53 ATIMGPNDSPYQGGVFFLTIHFPTDYPFK 81 (165)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEECCCCCCccCceEEEEEECCCcCCCC
Confidence 344 4888999999999999999999964
No 80
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=56.57 E-value=2.9 Score=37.10 Aligned_cols=25 Identities=8% Similarity=0.028 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 61 GP~~TpYegG~f~l~i~fP~~YP~~ 85 (216)
T 2pwq_A 61 GPEGTPYEGGHFTLAITIPNDYPYN 85 (216)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred CCCCCCccceEEEEEEECCCcCCCC
Confidence 5788899999999999999999954
No 81
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=56.24 E-value=3 Score=34.96 Aligned_cols=25 Identities=8% Similarity=-0.153 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.|.+.+..+||..
T Consensus 43 GP~~tpYegg~f~~~i~fp~~YP~~ 67 (165)
T 2ucz_A 43 GPPDTPYADGVFNAKLEFPKDYPLS 67 (165)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccCcEEEEEEECCccCCCC
Confidence 5778899999999999999999964
No 82
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=55.26 E-value=3 Score=35.35 Aligned_cols=25 Identities=16% Similarity=0.022 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.+.+.+..+||..
T Consensus 42 GP~~tpYegG~f~l~i~fp~~YP~~ 66 (169)
T 1ayz_A 42 GPADTPYEDGTFRLLLEFDEEYPNK 66 (169)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCCEEEEEEECcccCCCC
Confidence 5788999999999999999999964
No 83
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=55.23 E-value=3.1 Score=34.45 Aligned_cols=25 Identities=12% Similarity=0.106 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
.|..+-|.||.|.+.+.+..+||..
T Consensus 42 Gp~~tpyegg~f~~~i~fp~~YP~~ 66 (152)
T 2aak_A 42 GPDDTPWDGGTFKLSLQFSEDYPNK 66 (152)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccCCEEEEEEECCCCCCCC
Confidence 5778899999999999999999964
No 84
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=54.67 E-value=2.5 Score=35.13 Aligned_cols=28 Identities=7% Similarity=-0.083 Sum_probs=23.8
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|+.+-|.||.|.+.+.+..+||..
T Consensus 39 ~~I~Gp~~tpyegg~f~~~i~fp~~YP~~ 67 (155)
T 1jat_A 39 VTIEGPEQSPYEDGIFELELYLPDDYPME 67 (155)
T ss_dssp EEEECCTTSTTTTEEEEEEEECCTTTTTS
T ss_pred EEEECCCCCCccCcEEEEEEEcCCCCCCC
Confidence 344 5778899999999999999999964
No 85
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=53.62 E-value=3.4 Score=35.98 Aligned_cols=25 Identities=8% Similarity=-0.059 Sum_probs=22.5
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 83 GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 83 GPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCCEEEEEEECCCcCCCC
Confidence 5778899999999999999999964
No 86
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=53.28 E-value=3.4 Score=37.58 Aligned_cols=50 Identities=16% Similarity=0.042 Sum_probs=36.4
Q ss_pred cchhhhhhhhccccC-------CCC------CC-----cccc-ccceecccCCcccccccccccccCCc
Q psy16981 59 ASAAQLRITKAELEL-------PTY------SG-----SVLL-HQGVLLYKGPTYLFGQESGFNQTNTN 108 (302)
Q Consensus 59 ~s~~~~r~~~~~~~~-------p~~------~~-----~~~~-~~~~~~~~~~~~~f~~~~~~~~~n~~ 108 (302)
++.|..||+||--+| |.. .+ ...| -|..+-|.||.|.+.+++..+||..+
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~P 123 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNP 123 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCC
Confidence 456888999865443 111 11 3344 48888999999999999999999764
No 87
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=53.01 E-value=4.1 Score=34.63 Aligned_cols=25 Identities=12% Similarity=-0.025 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.|.+.+..+||..
T Consensus 56 GP~~TpYegG~f~~~i~fp~~YP~~ 80 (172)
T 2awf_A 56 GPPDTLYEGGVFKAHLTFPKDYPLR 80 (172)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred CCCCCCcCCcEEEEEEECCcccCCC
Confidence 5788999999999999999999964
No 88
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=50.71 E-value=5.8 Score=32.48 Aligned_cols=25 Identities=12% Similarity=0.022 Sum_probs=22.2
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.+.+++..+||..
T Consensus 62 GP~~TpYegG~f~l~i~fp~~YP~~ 86 (136)
T 2a7l_A 62 GAPGTLYEGEKFQLLFKFSSRYPFD 86 (136)
T ss_dssp CCTTSTTTTCEEEEEEEECTTTTTS
T ss_pred CCCCCccccEEEEEEEECCCCCCCC
Confidence 4677899999999999999999964
No 89
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=49.60 E-value=4.4 Score=34.87 Aligned_cols=25 Identities=8% Similarity=-0.067 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+++..+||..
T Consensus 59 GP~~tpYegG~f~l~i~fp~~YP~~ 83 (179)
T 2z5d_A 59 GPQGTPYEGGVWKVRVDLPDKYPFK 83 (179)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccCCEEEEEeeCCCCCCCC
Confidence 5788999999999999999999964
No 90
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=48.05 E-value=6.7 Score=32.83 Aligned_cols=25 Identities=12% Similarity=0.062 Sum_probs=22.4
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 63 GP~~TpYegG~f~l~i~fp~~YP~~ 87 (156)
T 2q0v_A 63 GQPGTVFENRIYSLTIFCDDNYPDS 87 (156)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCcEEEEEEECCCcCCCC
Confidence 4778899999999999999999954
No 91
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=47.80 E-value=4.8 Score=33.15 Aligned_cols=28 Identities=7% Similarity=0.049 Sum_probs=23.9
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|..+-|.||.|.+.+.+..+||..
T Consensus 38 ~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 66 (150)
T 1z2u_A 38 ATIMGPPESPYQGGVFFLTIHFPTDYPFK 66 (150)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEECCCCCCcCCCEEEEEEECCCCCCCC
Confidence 344 4788999999999999999999964
No 92
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=46.20 E-value=5.1 Score=34.70 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=24.7
Q ss_pred ccc-ccceecccCCcccccccccccccCCc
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNTN 108 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~~ 108 (302)
..| -|..+-|.||.|.+.+.+..+||..+
T Consensus 42 ~~i~Gp~~tpyegg~f~~~i~fp~~YP~~p 71 (201)
T 3k9o_A 42 GEIAGPPDTPYEGGRYQLEIKIPETYPFNP 71 (201)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred EEEECCCCCCCCCCEEEEEEECCCcCCCCC
Confidence 344 48888999999999999999999764
No 93
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=41.45 E-value=7.5 Score=33.22 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=24.6
Q ss_pred ccc-ccceecccCCcccccccccccccCCc
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNTN 108 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~~ 108 (302)
+.| -+..+.|.||.|.+.+.+..+||..+
T Consensus 42 ~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 71 (183)
T 3rz3_A 42 VAIFGPPNTYYEGGYFKARLKFPIDYPYSP 71 (183)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSSC
T ss_pred eeeeCCCCCCCCCCeEEEEEECCCCCCCCC
Confidence 344 48888999999999999999999763
No 94
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=36.61 E-value=10 Score=33.39 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 41 GP~~TpYegG~f~l~i~fP~~YP~~ 65 (215)
T 1tte_A 41 GPPGTPYEGGKFVVDIEVPMEYPFK 65 (215)
T ss_dssp EEEEETTEEECCEEEEECCSCSSSC
T ss_pred CCCCCCcCCCEEEEEEeCCccCCCC
Confidence 5788999999999999999999964
No 95
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=30.32 E-value=12 Score=35.78 Aligned_cols=28 Identities=7% Similarity=0.061 Sum_probs=23.7
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|..+-|.||.|-+.+.++.+||..
T Consensus 37 ~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 65 (399)
T 4ddg_A 37 ATIMGPNDSPYQGGVFFLTIHFPTDYPFK 65 (399)
T ss_dssp EEEECCTTSSSTTCEEEEEEECCSSTTTS
T ss_pred EEEECCCCCCCCCCEEEEEEECCcccCCC
Confidence 344 4888899999999999999999953
No 96
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=28.06 E-value=19 Score=29.09 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-+..+-|.||.|.+.+.+..+||..
T Consensus 48 GP~~tpyegg~f~~~i~fp~~YP~~ 72 (138)
T 1jat_B 48 GPPHSNHENRIYSLSIDCGPNYPDS 72 (138)
T ss_dssp CCSSSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccceEEEEEEECCCCCCCC
Confidence 4788999999999999999999964
No 97
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=27.66 E-value=20 Score=30.59 Aligned_cols=70 Identities=44% Similarity=0.565 Sum_probs=50.7
Q ss_pred HHhhhhhccccccCCCCCCCCCcccccchhhhhhhhccccC--CCC-------CC-----ccccccceecccCCcccccc
Q psy16981 33 MIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKAELEL--PTY-------SG-----SVLLHQGVLLYKGPTYLFGQ 98 (302)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~~~~~~~--p~~-------~~-----~~~~~~~~~~~~~~~~~f~~ 98 (302)
|||||+||+|+++.++.+ +.+.|++..||+||--+| |+. .+ .+++.|..+.|.||.|.+.+
T Consensus 3 m~~~~~~~~~~~~~~~~~-----~~~~~~~~~RL~kEl~~l~~~~~i~~~~p~~~nl~~W~~~igP~~tpYegg~f~~~i 77 (180)
T 2nvu_C 3 MIKLFSLKQQKKEEEKGS-----SKKASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVFSF 77 (180)
T ss_dssp --CCCCCCCSCCCCCCSC-----CCSCCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEECCCSGGGTTBCEEEEE
T ss_pred hHHHHHHHHHHHhhhhcc-----cCCccHHHHHHHHHHHhcCCCCCeEEEecccccccceEEEECCCCCCCCCCEEEEEE
Confidence 999999988886544322 457899999999965333 221 12 34557888999999999999
Q ss_pred cccccccCC
Q psy16981 99 ESGFNQTNT 107 (302)
Q Consensus 99 ~~~~~~~n~ 107 (302)
.+..+||..
T Consensus 78 ~fp~~YP~~ 86 (180)
T 2nvu_C 78 KVGQGYPHD 86 (180)
T ss_dssp ECCTTTTTS
T ss_pred eCCCcCCCC
Confidence 999999953
No 98
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=27.43 E-value=20 Score=30.85 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=54.8
Q ss_pred HHHhhhhhccccccCCCCCCCCCcccccchhhhhhhhccccC--CC----------CCCcc--------ccccceecccC
Q psy16981 32 NMIKLFSLKQQKKDGENPARPGTQQKKASAAQLRITKAELEL--PT----------YSGSV--------LLHQGVLLYKG 91 (302)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~~~~~~~--p~----------~~~~~--------~~~~~~~~~~~ 91 (302)
.|+||+++|+|++.++++++ +..++.|+|..||+||--+| |+ ..+++ .|.+..+-|.|
T Consensus 2 ~m~~l~~~~~~~~~~~~~~~--~~~~~~s~a~~RL~kEl~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyeg 79 (190)
T 3o2u_A 2 SMLKLRQLQKKKQKENENSS--SIQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNY 79 (190)
T ss_dssp CHHHHHHHHHHHHHHHHHHH--SSSCCCCHHHHHHHHHHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTT
T ss_pred chHHHHHHHHHHHHHHHhcC--CCCCCccHHHHHHHHHHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCC
Confidence 49999999888877655542 45678899999999965333 21 22222 23466688999
Q ss_pred CcccccccccccccCC
Q psy16981 92 PTYLFGQESGFNQTNT 107 (302)
Q Consensus 92 ~~~~f~~~~~~~~~n~ 107 (302)
|.|.+.+.+..+||..
T Consensus 80 g~f~~~i~fp~~YP~~ 95 (190)
T 3o2u_A 80 GSINFNLDFNEVYPIE 95 (190)
T ss_dssp CCEEEEEECCTTTTTS
T ss_pred CEEEEEEECCCCCCCC
Confidence 9999999999999965
No 99
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=26.63 E-value=20 Score=29.29 Aligned_cols=25 Identities=16% Similarity=-0.015 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+++..+||..
T Consensus 39 Gp~~tpyegg~f~~~i~fp~~YP~~ 63 (149)
T 2r0j_A 39 GPDGTPYEGGTYKLELFLPEQYPME 63 (149)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCCEEEEEEeCCcccCCC
Confidence 4788899999999999999999964
No 100
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=26.04 E-value=22 Score=29.00 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 40 Gp~~tpyegg~f~~~i~fp~~YP~~ 64 (149)
T 1fxt_A 40 GPPGTPYEGGKFVVDIEVPMEYPFK 64 (149)
T ss_dssp CCSSSTTCSSEEEEEEECCTTTTSS
T ss_pred CCCCCCcCCcEEEEEEECCCCCCCC
Confidence 5788899999999999999999964
No 101
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=25.58 E-value=22 Score=29.97 Aligned_cols=25 Identities=8% Similarity=-0.077 Sum_probs=22.8
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.|.+++..+||..
T Consensus 56 Gp~~tpyegg~f~~~i~fp~~YP~~ 80 (172)
T 2y9m_A 56 GPSDTPYENHQFRILIEVPSSYPMN 80 (172)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCcccCCEEEEEEECCCcCCCC
Confidence 4788999999999999999999965
No 102
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=25.14 E-value=23 Score=29.20 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=23.9
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|..+-|.||.|.+.+.+..+||..
T Consensus 39 ~~i~GP~~tpyegg~f~~~i~fp~~YP~~ 67 (154)
T 2c2v_B 39 VVIAGPQDSPFEGGTFKLELFLPEEYPMA 67 (154)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEECCCCCCcCCCeEEEEEEcCCCCCCC
Confidence 344 4788999999999999999999964
No 103
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=24.78 E-value=23 Score=29.66 Aligned_cols=25 Identities=4% Similarity=-0.173 Sum_probs=22.7
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.|.+.+..+||..
T Consensus 42 GP~~tpYegg~f~~~i~fp~~YP~~ 66 (169)
T 1yh2_A 42 GGANTPYEKGVFKLEVIIPERYPFE 66 (169)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred CCCCCCccCCEEEEEEEeCCCCCCC
Confidence 5788999999999999999999964
No 104
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=23.54 E-value=25 Score=29.02 Aligned_cols=28 Identities=11% Similarity=-0.039 Sum_probs=23.9
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..| -|..+-|.||.|.+.+.+..+||..
T Consensus 45 ~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 73 (159)
T 2bep_A 45 GEIAGPPDTPYEGGRYQLEIKIPETYPFN 73 (159)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSS
T ss_pred EEEECCCCCCccCCEEEEEEeCCCcCCCC
Confidence 344 4788899999999999999999964
No 105
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=23.35 E-value=20 Score=29.52 Aligned_cols=28 Identities=11% Similarity=-0.075 Sum_probs=24.1
Q ss_pred cccccceecccCCcccccccccccccCC
Q psy16981 80 VLLHQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
..|.|..+-|.||.|.+.+.+..+||..
T Consensus 39 ~~I~P~~tpyegg~f~~~i~fp~~YP~~ 66 (155)
T 1wzv_A 39 ALLLPDQPPYHLKAFNLRISFPPEYPFK 66 (155)
T ss_dssp EEECCCSTTGGGEEEEEEEECCTTTTSS
T ss_pred EEEcCCCCCCCCCEEEEEEECCCCCCCC
Confidence 3444888999999999999999999964
No 106
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=21.63 E-value=39 Score=23.83 Aligned_cols=33 Identities=18% Similarity=0.417 Sum_probs=25.6
Q ss_pred CCcccccccCC-----CCCCC-cchHHHHHHHHhhhhhc
Q psy16981 8 QGSRHTFSNNG-----IPTHP-TLSICQIKNMIKLFSLK 40 (302)
Q Consensus 8 ~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~ 40 (302)
.||.|.|.+.+ ||.|+ .+..-.++.++|--.++
T Consensus 25 ~GSH~~~~~~~~~~~~vP~h~~ei~~g~lk~Ilkqagl~ 63 (70)
T 1whz_A 25 KGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDAGLT 63 (70)
T ss_dssp ETTEEEEECTTSCEEEEECSSSSCCHHHHHHHHHHTTCC
T ss_pred CCCCceEecCCCCeeEecCCcCcCCHHHHHHHHHHcCCC
Confidence 48888998633 77788 78888899998876664
No 107
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=21.13 E-value=29 Score=28.62 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=22.5
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.+.+.+..+||..
T Consensus 47 Gp~~tpyegg~f~~~i~fp~~YP~~ 71 (157)
T 2gjd_A 47 GKEGTNWAGGVYPITVEYPNEYPSK 71 (157)
T ss_dssp CCTTSTTTTBEEEEEEECCTTTTTS
T ss_pred CCCCCCcCCeEEEEEEEcCCCCCCC
Confidence 4778899999999999999999964
No 108
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=20.96 E-value=30 Score=28.95 Aligned_cols=25 Identities=16% Similarity=0.216 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+.|.||.|.+.+++..+||..
T Consensus 67 GP~~TpYegG~f~l~i~fp~~YP~~ 91 (160)
T 2a4d_A 67 GPPRTIYENRIYSLKIECGPKYPEA 91 (160)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccCeEEEEEEECCCcCCCC
Confidence 4788999999999999999999964
No 109
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=20.68 E-value=36 Score=28.74 Aligned_cols=25 Identities=16% Similarity=0.216 Sum_probs=22.6
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+.+..+||..
T Consensus 77 GP~~TpYegG~f~l~i~fp~~YP~~ 101 (170)
T 2hlw_A 77 GPPRTIYENRIYSLKIECGPKYPEA 101 (170)
T ss_dssp CCSSSTTSSCCBCEEEECCSSCTTS
T ss_pred CCCCCCcCCcEEEEEEECCCCCCCC
Confidence 4788899999999999999999964
No 110
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=20.62 E-value=31 Score=29.07 Aligned_cols=28 Identities=11% Similarity=0.027 Sum_probs=23.9
Q ss_pred ccc-ccceecccCCcccccccccccccCC
Q psy16981 80 VLL-HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 80 ~~~-~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
+.| -+..+.|.||.|.+.+.+..+||..
T Consensus 42 ~~I~GP~~tpyegg~f~~~i~fp~~YP~~ 70 (171)
T 1yf9_A 42 VEFKGPEGTPYEDGTWMLHVQLPSDYPFK 70 (171)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred EEEECCCCCCccCceEEEEEEcCCCCCCC
Confidence 344 5788999999999999999999954
No 111
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=20.42 E-value=32 Score=28.42 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=22.2
Q ss_pred ccceecccCCcccccccccccccCC
Q psy16981 83 HQGVLLYKGPTYLFGQESGFNQTNT 107 (302)
Q Consensus 83 ~~~~~~~~~~~~~f~~~~~~~~~n~ 107 (302)
-|..+-|.||.|.+.+++..+||..
T Consensus 51 Gp~~tpyegg~f~~~i~fp~~YP~~ 75 (158)
T 1zdn_A 51 GPEGTPYAGGLFRMKLLLGKDFPAS 75 (158)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCCCccCcEEEEEEEcCCCCCCC
Confidence 4777899999999999999999964
Done!