BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16982
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9EPL8|IPO7_MOUSE Importin-7 OS=Mus musculus GN=Ipo7 PE=1 SV=2
Length = 1038
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 88/116 (75%)
Query: 1 MMSEVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAP 60
M ++D+PVRQAGV+YLKN+IT W ++E PG +++ E+D+ IR+ IV+A++ +P
Sbjct: 44 MSEQLDLPVRQAGVIYLKNMITQYWPDREATPGDIAPYTIPEEDRHCIRENIVEAIIHSP 103
Query: 61 EVIRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
E+IRVQL C+ +I+KHD+P +WT IVDK+ YLQ+ ++ W G LLCLYQLVKNY
Sbjct: 104 ELIRVQLTTCIHHIIKHDYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNY 159
>sp|O95373|IPO7_HUMAN Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1
Length = 1038
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 88/116 (75%)
Query: 1 MMSEVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAP 60
M ++D+PVRQAGV+YLKN+IT W ++E PG +++ E+D+ IR+ IV+A++ +P
Sbjct: 44 MSEQLDLPVRQAGVIYLKNMITQYWPDRETAPGDISPYTIPEEDRHCIRENIVEAIIHSP 103
Query: 61 EVIRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
E+IRVQL C+ +I+KHD+P +WT IVDK+ YLQ+ ++ W G LLCLYQLVKNY
Sbjct: 104 ELIRVQLTTCIHHIIKHDYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNY 159
>sp|Q7TMY7|IPO8_MOUSE Importin-8 OS=Mus musculus GN=Ipo8 PE=2 SV=3
Length = 1010
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPL-AFSLHEQDKAMIRDAIVDAVVMAPEVI 63
V+ PVRQA +YLKN++T W ++E PG + F++HE D+ IRD IV+ ++ +P+++
Sbjct: 48 VEFPVRQAAAIYLKNMVTQYWPDREPPPGEVIFPFNIHENDRQQIRDNIVEGIIRSPDLV 107
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
RVQL +C+ I++HDFPG W +VDK+ YLQ+P++ W G+LLCLYQLVK Y
Sbjct: 108 RVQLTMCLRVIIRHDFPGHWPAVVDKIDYYLQSPNSGSWLGSLLCLYQLVKTY 160
>sp|O15397|IPO8_HUMAN Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2
Length = 1037
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPL-AFSLHEQDKAMIRDAIVDAVVMAPEVI 63
V+ PVRQA +YLKN++T W ++E PG + F++HE D+ IRD IV+ ++ +P+++
Sbjct: 48 VEFPVRQAAAIYLKNMVTQYWPDREPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLV 107
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
RVQL +C+ I+KHDFPG W +VDK+ YLQ+ + W G+LLCLYQLVK Y
Sbjct: 108 RVQLTMCLRAIIKHDFPGHWPGVVDKIDYYLQSQSSASWLGSLLCLYQLVKTY 160
>sp|Q9XZU1|XPO2_DROME Exportin-2 OS=Drosophila melanogaster GN=Cas PE=2 SV=2
Length = 975
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 3 SEVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEV 62
+++DM R AG + KN I W +D P +HE D+ I+ IV ++ +P
Sbjct: 53 AQMDMTTRVAGAIAFKNYIKRNWA-AHLDSDGPD--RIHESDRNTIKTLIVTLMLHSPVA 109
Query: 63 IRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
++ QL+ VS I K+DFP KW Q++D++ + D G L + L K Y
Sbjct: 110 LQKQLSDAVSIIGKYDFPKKWPQLIDEMVERFASGDFNVINGVLQTAHSLFKRY 163
>sp|O59809|IMA3_SCHPO Probable importin c550.11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC550.11 PE=3 SV=1
Length = 1029
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 4 EVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVI 63
E+ +P +QA V+YLKN ++ W + D +PL + E+ KA+ R I+ ++ +P
Sbjct: 46 EISLPTQQAAVIYLKNRVSRSWSSID-DAPSPL--DIPEEQKALFRQNILPVLLQSPMST 102
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
R L ++ I+ DFP W + S + + + + L+C ++L K Y
Sbjct: 103 RSHLMAILNIILSTDFPEYWPGFSEYTSNLVHSTERCEVYAGLICFHELAKVY 155
>sp|Q55CX9|IPO7_DICDI Probable importin-7 homolog OS=Dictyostelium discoideum
GN=DDB_G0269860 PE=3 SV=1
Length = 1065
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 3 SEVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEV 62
+EVD+ +RQ ++LKN+I +W E + +P+ ++D I++ ++D +V + +
Sbjct: 49 NEVDISIRQGVSIFLKNMIITKWRGAEDE--SPIT----QEDAEFIKENLIDLLVHSHHL 102
Query: 63 IRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
++ Q+ + I DFP KWT ++ K Y+ D L + +K +
Sbjct: 103 VQNQIEAMIEIIANRDFPEKWTSLLPKSIQYINTQDVKLILAGLTSIQLGIKRF 156
>sp|P33307|CSE1_YEAST Importin alpha re-exporter OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CSE1 PE=1 SV=2
Length = 960
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 MMSEVDMPV--RQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVM 58
+++ ++P+ R AG ++ KN I +WV++ + P + +I+ IV ++
Sbjct: 43 VIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLP------ANNVELIKKEIVPLMIS 96
Query: 59 APEVIRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
P ++VQ+ +S+I DFP +W ++ ++ L N D G L + + K +
Sbjct: 97 LPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRW 154
>sp|Q9PTU3|XPO2_PAGMA Exportin-2 OS=Pagrus major GN=cse1l PE=2 SV=1
Length = 971
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D +R V KN I W E +P + + D+ I+ IV+ ++ +PE I+
Sbjct: 55 DNVIRVCAAVTFKNYIKRNWRVIEDEPN-----KVSDPDRTAIKANIVNLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ ++ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVTRFRSGDFHIINGVLRTAHSLFKRY 160
>sp|Q7SZC2|XPO2_DANRE Exportin-2 OS=Danio rerio GN=cse1l PE=2 SV=1
Length = 971
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 9 VRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRVQLA 68
+R V KN I W E +P + + D+ I+ IV+ ++ +PE I+ QL+
Sbjct: 58 IRVCSAVTFKNYIKRNWRIVEDEPN-----KISDPDRTAIKANIVNLMLTSPEQIQKQLS 112
Query: 69 VCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
+S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 113 DAISIIGREDFPLKWPDLLTEMVNRFQSGDFHIINGVLRTAHSLFKRY 160
>sp|Q8AY73|XPO2_ORENI Exportin-2 OS=Oreochromis niloticus GN=cse1l PE=2 SV=1
Length = 971
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D +R V KN I W E +P + + D+ ++ IV+ ++ +PE I+
Sbjct: 55 DNVIRVCAAVTFKNYIKRNWRIVEDEPN-----KISDPDRTAVKANIVNLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ ++ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVARFRSGDFHIINGVLRTAHSLFKRY 160
>sp|Q9ERK4|XPO2_MOUSE Exportin-2 OS=Mus musculus GN=Cse1l PE=2 SV=1
Length = 971
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D ++ V KN I W E +P + E D+ I+ IV ++ +PE I+
Sbjct: 55 DNVIKVCASVTFKNYIKRNWRIVEDEPN-----KICEADRVAIKANIVHLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY 160
>sp|A5D785|XPO2_BOVIN Exportin-2 OS=Bos taurus GN=CSE1L PE=2 SV=1
Length = 971
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D ++ V KN I W E +P + E D+ I+ IV ++ +PE I+
Sbjct: 55 DNVIKVCASVTFKNYIKRNWRIVEDEPN-----KICEADRVAIKANIVHLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY 160
>sp|P55060|XPO2_HUMAN Exportin-2 OS=Homo sapiens GN=CSE1L PE=1 SV=3
Length = 971
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D ++ V KN I W E +P + E D+ I+ IV ++ +PE I+
Sbjct: 55 DNVIKVCASVTFKNYIKRNWRIVEDEPN-----KICEADRVAIKANIVHLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY 160
>sp|Q5R9J2|XPO2_PONAB Exportin-2 OS=Pongo abelii GN=CSE1L PE=2 SV=1
Length = 971
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
D ++ V KN I W E +P + E D+ I+ IV ++ +PE I+
Sbjct: 55 DNVIKVCASVTFKNYIKRNWRIVEDEPN-----KICEADRVAIKANIVHLMLSSPEQIQK 109
Query: 66 QLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
QL+ +S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 110 QLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY 160
>sp|Q6GMY9|XPO2_XENLA Exportin-2 OS=Xenopus laevis GN=cse1l PE=2 SV=1
Length = 971
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 6 DMPVRQAGVVYLKNLITNQW--VEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVI 63
D ++ V KN I W VE E + + E D+ ++ +I++ ++ +PE I
Sbjct: 55 DNVIKVCSAVTFKNYIKRNWRIVEDESN-------KICEADRIAVKSSIINLMLRSPEQI 107
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
+ QL+ +S I + DFP KW ++ ++ Q+ D G L + L K Y
Sbjct: 108 QKQLSDAISIIGREDFPQKWPNLLTEMVNRFQSGDFHVINGVLHTAHSLFKRY 160
>sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=1 SV=1
Length = 972
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIR 64
+D R A V KN + ++W +P+ S EQ I+ IV ++ A I+
Sbjct: 55 IDEQTRHAAAVNFKNHLRSRWHPAGDSGISPIVDSEKEQ----IKTLIVSLMLSASPRIQ 110
Query: 65 VQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQN 96
QL+ ++ I KHDFP W ++ ++ LQN
Sbjct: 111 SQLSEALTVIGKHDFPKAWPALLPELIANLQN 142
>sp|P46970|NMD5_YEAST Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2
Length = 1048
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 4 EVDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQD-KAMIRDAIVDAVV----M 58
EV ++ + +Y KN IT W L S + D K +++D ++ +V
Sbjct: 49 EVPENIKLSASLYFKNKITYGWSAGARQGSNELLDSHVDPDEKPVVKDMLIKTMVSVSKT 108
Query: 59 APEVIRVQLAVCVSNIVKHDFPGK-WTQIVDKVSIYLQNPDATPWFGALLCLYQLVKNY 116
+P IRV L ++ I+ D+P K W ++ L N D T + LLCL ++ + Y
Sbjct: 109 SPRCIRV-LKSALTVIISEDYPSKKWGNLLPNSLELLANEDITVTYVGLLCLAEIFRTY 166
>sp|O13671|CSE1_SCHPO Importin-alpha re-exporter OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=kap109 PE=3 SV=2
Length = 967
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIR 64
VD+ ++ A +Y KN I W +E G + S ++ +I+ I++ ++ + +I+
Sbjct: 47 VDINIKLAASLYFKNYIKKHWDSEE---GASIRIS--DEVAELIKREIINLMLKSTTIIQ 101
Query: 65 VQLAVCVSNIVKHDFPGKWTQIV 87
VQL + I DFP +W ++
Sbjct: 102 VQLGEVIGYIANFDFPDRWDTLL 124
>sp|Q54E36|XPO2_DICDI Exportin-2 OS=Dictyostelium discoideum GN=xpo2 PE=3 SV=1
Length = 951
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 2 MSEVDMPVRQAGVVYLKNLITNQWVE-KEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMA- 59
+ +D R + KNL+ + WV+ EV+ P DK M++ +++ ++ A
Sbjct: 53 LKTIDAGARTLSAITFKNLVKDSWVDGDEVENPIP------SNDKEMVKSLLLNFILSAV 106
Query: 60 PEVIRVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALL-CLYQLVKNY 116
+ QL +S I DFP +W I+ ++ +++ P +L L+ L+K Y
Sbjct: 107 NNTTQSQLVESLSMIGVSDFPQQWPSILPELIKQMESNTDIPTLSIILRVLHSLLKKY 164
>sp|Q8K2V6|IPO11_MOUSE Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1
Length = 975
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIR 64
+D+ VR V+Y K+ I W + V P +L E++K+ +R ++ I
Sbjct: 54 LDINVRWLAVLYFKHGIDRYW--RRVAP-----HALSEEEKSTLRAGLITNFNEPINQIA 106
Query: 65 VQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVK 114
Q+AV ++ + + D P +W +++ + ++ D ALL Y + K
Sbjct: 107 TQIAVLIAKVARLDCPRQWPELIPTLVESVKVQDDLRQHRALLTFYHVTK 156
>sp|Q9UI26|IPO11_HUMAN Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1
Length = 975
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 5 VDMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIR 64
+D+ VR V+Y K+ I W + V P +L E++K +R ++ I
Sbjct: 54 LDINVRWLAVLYFKHGIDRYW--RRVAP-----HALSEEEKTTLRAGLITNFNEPINQIA 106
Query: 65 VQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVK 114
Q+AV ++ + + D P +W +++ + ++ D ALL Y + K
Sbjct: 107 TQIAVLIAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTK 156
>sp|Q10297|IMB5_SCHPO Importin subunit beta-5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap114 PE=3 SV=3
Length = 993
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 3 SEVDMPVRQAGVVYLKNLITNQW---VEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMA 59
S +P+RQ ++YL+ I + W E+ D P E K +R+ ++ +V
Sbjct: 47 SGASVPLRQGSLIYLQRYIVHHWSPLFEQFQDGPIP-----DENVKKHVRETLLHLLVSL 101
Query: 60 PEVIRVQ-LAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLV 113
++ +A VS I D+P +W ++V V LQ+ + +L L +LV
Sbjct: 102 DNFTLIKAVAYAVSLIANVDYPDEWPEVVPAVLHLLQSTNENSINASLDVLDELV 156
>sp|Q91YE6|IPO9_MOUSE Importin-9 OS=Mus musculus GN=Ipo9 PE=1 SV=3
Length = 1041
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 7 MPVRQAGVVYLKNLITNQWV---EKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVI 63
+ +RQ V LK + W EK P T E+ K +IR+ + + + + +
Sbjct: 71 LAIRQLASVILKQYVETHWCAQSEKFRPPETT------ERAKIVIRELLPNGLRESISKV 124
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKN 115
R +A VS I D+P W Q+ + + L + D GA+ L + +
Sbjct: 125 RSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEFTRE 176
>sp|Q96P70|IPO9_HUMAN Importin-9 OS=Homo sapiens GN=IPO9 PE=1 SV=3
Length = 1041
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 7 MPVRQAGVVYLKNLITNQWV---EKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVI 63
+ +RQ V LK + W EK P T E+ K +IR+ + + + + +
Sbjct: 71 LAIRQLASVILKQYVETHWCAQSEKFRPPETT------ERAKIVIRELLPNGLRESISKV 124
Query: 64 RVQLAVCVSNIVKHDFPGKWTQIVDKVSIYLQNPDATPWFGALLCLYQLVKN 115
R +A VS I D+P W Q+ + + L + D GA+ L + +
Sbjct: 125 RSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEFTRE 176
>sp|O94545|KA113_SCHPO Importin beta-like protein kap113 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=kap113 PE=3 SV=1
Length = 983
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 6 DMPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRV 65
DM +R ++ L+N I W + SL +++ IR + + + ++ +
Sbjct: 51 DMSLRWIAIIQLRNSIDIIWRKNT-------KMSLLPEERDFIRCNALLGSIKSENLLSI 103
Query: 66 QLAVCVSNIVKHDFPGKWTQI 86
Q A+ VS I + D+P +W +
Sbjct: 104 QNALVVSRIARLDYPTEWPSL 124
>sp|Q559R1|Y2456_DICDI Putative uncharacterized protein DDB_G0272456 OS=Dictyostelium
discoideum GN=DDB_G0272456 PE=4 SV=1
Length = 1521
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 48 IRDAIVDAVVMAPEVI----RVQLAVCVSNIV------KHDFPGKWTQIVDKVSIYLQNP 97
I + ++ +V P I Q+ CVS ++ K + P T ++ +S Y+QN
Sbjct: 627 IHNGLIMILVQDPNYILPAFHQQILRCVSTLIINCPYEKLNMPSLLTSLLSAISPYIQNR 686
Query: 98 DATPWFGALLCLYQL 112
D + +L+C+ QL
Sbjct: 687 DHSIQLTSLICIKQL 701
>sp|Q02932|KA120_YEAST Importin beta-like protein KAP120 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KAP120 PE=1 SV=1
Length = 1032
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 7 MPVRQAGVVYLKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAVVMAPEVIRVQ 66
+ +R V+ KN + W ++ ++ + +KA IR + + + + +Q
Sbjct: 59 LQIRWLAVIQFKNGVDKYWRSTRIN-------AIPKDEKASIRGRLFEMIDEQNNQLCIQ 111
Query: 67 LAVCVSNIVKHDFPGKWTQIVDKVSIYLQN----PDATPWFGALLCLYQLVK 114
A + I + DFP +W + + + L + D+ + L+ + Q+VK
Sbjct: 112 NAQASARIARLDFPVEWPTLFEDLENLLNDEIIRKDSVKIYNILMHINQIVK 163
>sp|Q54PQ8|XPO5_DICDI Exportin-5 OS=Dictyostelium discoideum GN=xpo5 PE=3 SV=1
Length = 1135
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 38/75 (50%), Gaps = 16/75 (21%)
Query: 17 LKNLITNQWVEKEVDPGTPLAFSLHEQDKAMIRDAIVDAV----VMAPEVIRVQLAVCVS 72
++ L+ N+W E ++Q++ +I+ I++ + P+ I+ +L +
Sbjct: 69 IETLVKNRWYE------------CNDQERELIKKEILELMRRITSNEPKFIKEKLVTILV 116
Query: 73 NIVKHDFPGKWTQIV 87
+++K D+P +W ++
Sbjct: 117 DVIKRDWPQRWMNLL 131
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,537,338
Number of Sequences: 539616
Number of extensions: 1534966
Number of successful extensions: 3568
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3529
Number of HSP's gapped (non-prelim): 39
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)