RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy16993
(703 letters)
>gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase.
Length = 500
Score = 211 bits (539), Expect = 1e-60
Identities = 99/270 (36%), Positives = 157/270 (58%), Gaps = 11/270 (4%)
Query: 416 VDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYM-SDAPHGVIF 474
+++ S L + + P+ L PNM F GG++ K AKPLP+++E ++ S HGV+
Sbjct: 221 PELMSKASAWLLRNYWDLEFPRPLLPNMEFIGGLNCKPAKPLPQEMEAFVQSSGEHGVVV 280
Query: 475 FSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRN-----WFPQAD 529
FS G+ V N+P N + ++I QK+LW+ D P+ L RN W PQ D
Sbjct: 281 FSLGSMVS--NIPEEKANEIASALAQIPQKVLWRFD---GTKPSTLGRNTRLVKWLPQND 335
Query: 530 ILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLD 589
+LGH R F+TH G + EA HGVP+V MP F DQ N M+ KG +++ ++
Sbjct: 336 LLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLNVLTMT 395
Query: 590 SDVVVEAVNAVLGDKTYAANAKRISAIMKSSPVSSLEKAVYWTEYVIRHEGAHFLKPAST 649
S+ ++ A+ V+ D +Y N R+S+I PV L++AV+W E+V+RH+GA L+PA+
Sbjct: 396 SEDLLNALKTVINDPSYKENIMRLSSIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAH 455
Query: 650 RLSLVQFLCLDILLVVISVMAAMLFVLFKC 679
L+ Q+ LD++ +++ +A + F+ FKC
Sbjct: 456 DLTWYQYHSLDVIGFLLACVATVAFITFKC 485
Score = 66.7 bits (163), Expect = 2e-11
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 76 GHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSD 135
GH R F+TH G + EA HGVP+V MP F DQ N M+ KG +++ ++ S+
Sbjct: 338 GHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLNVLTMTSE 397
Query: 136 VVVEAVNAVLGDK 148
++ A+ V+ D
Sbjct: 398 DLLNALKTVINDP 410
Score = 30.8 bits (70), Expect = 2.8
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 25 FPMALNSHIKPFQPLLYELSRRGHNVT----EVSSFPPPPGVDNYTYVYVP 71
+PM SH + +L EL +RGH VT S P N + P
Sbjct: 6 WPMDG-SHWMNMKGILLELVQRGHEVTVLRPSASILIGPALPSNLKFETYP 55
>gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional.
Length = 507
Score = 186 bits (475), Expect = 1e-51
Identities = 112/414 (27%), Positives = 200/414 (48%), Gaps = 46/414 (11%)
Query: 285 LAQM--EQVLRTPEIQTFVQRDDSHFDLVIIEGTFCGECLLAMGHKY-KAPVI------- 334
L +M +Q P ++ + ++ FDL++ E + L H + APVI
Sbjct: 113 LVRMISDQ-FDLPNVKNLIANKNNKFDLLVTEAFL--DYPLVFSHLFGDAPVIQISSGYG 169
Query: 335 ---NFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNLF 391
NF+ +G + Y NL + ++ RL + + + D
Sbjct: 170 LAENFETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLAD------- 222
Query: 392 YYPKQVALMDKYFKYPGYQSRPPMVDMLRN-ISMTFLE-H---DISIGVPQALTPNMLFT 446
+Q L+ + F P + LRN + + F+ H D + VP P++ +
Sbjct: 223 ---EQNKLLKQQFG-----PDTPTIRELRNRVQLLFVNVHPVFDNNRPVP----PSVQYL 270
Query: 447 GGMHI--KHAKPLPEDLEKYMSDAPHGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQK 504
GG+H+ K +PL + LE++++++ +GV++ SFG+++ +M L + +F K+
Sbjct: 271 GGLHLHKKPPQPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYN 330
Query: 505 ILWKTDVEVE---VPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMM 561
+LWK D EVE +P NVL + WFPQ +L HKN + F+T GG+ S EA VP+V +
Sbjct: 331 VLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGL 390
Query: 562 PGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISAIMKSSP 621
P DQF N E G+GR +D ++ + +V A+ V+ + Y N K + +++ P
Sbjct: 391 PMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQP 450
Query: 622 VSSLEKAVYWTEYVIRHEG-AHFLKPASTRLSLVQFLCLDILLVVISVMAAMLF 674
++ L KA+++TE+VIR++ LK + +S + IL+ +++
Sbjct: 451 MTPLHKAIWYTEHVIRNKHGNTSLKTKAANVSYSDYFMSYILVPLVTFTVMNHL 504
Score = 62.7 bits (153), Expect = 3e-10
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDV 136
HKN + F+T GG+ S EA VP+V +P DQF N E G+GR +D ++ +
Sbjct: 362 HKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421
Query: 137 VVEAVNAVLGDKTITDELE 155
+V A+ V+ + L+
Sbjct: 422 LVLAIVDVIENPKYRKNLK 440
Score = 39.6 bits (93), Expect = 0.005
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 1 MIRLTLIFLGVLLCHIDASNILAFFPMALNSHIKPFQPLLYELSRRGHNVTEVSSFPPPP 60
M + L+ L +LL + A+ ILA FP SH F+ + L+ RGHNVT +
Sbjct: 3 MTIIILLLLLLLLSGVRAARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTL--- 59
Query: 61 GVDNYTYVYVPHL 73
Y ++
Sbjct: 60 -RVYYASHLCGNI 71
>gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family. This model
describes the MGT (macroside glycosyltransferase)
subfamily of the UDP-glucuronosyltransferase family.
Members include a number of glucosyl transferases for
macrolide antibiotic inactivation, but also include
transferases of glucose-related sugars for macrolide
antibiotic production [Cellular processes, Toxin
production and resistance].
Length = 392
Score = 105 bits (265), Expect = 2e-24
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 458 PEDLEKYMSDAPHGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKIL----WKTDVEV 513
ED V+ S GT F N P + VE+F + ++ D
Sbjct: 213 KEDGSWERPGDGRPVVLISLGT--VFNNQPSF-YRTCVEAFRDLDWHVVLSVGRGVDPAD 269
Query: 514 --EVPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNV 571
E+PPNV VR W PQ +IL + F+THGG++S MEA ++GVP+V +P +DQ
Sbjct: 270 LGELPPNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAVPQGADQPMTA 327
Query: 572 LLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISAIMKSS 620
+ E GLGR + + + ++ + EAV AVL D YA +++ A ++ +
Sbjct: 328 RRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREA 376
Score = 68.9 bits (169), Expect = 2e-12
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 69 YVPHLFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVID 128
+VP L K F+THGG++S MEA ++GVP+V +P +DQ + E GLGR +
Sbjct: 282 WVPQL-EILKKADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340
Query: 129 MDSLDSDVVVEAVNAVLGDKTITDELETV 157
+ + ++ + EAV AVL D + L +
Sbjct: 341 PEEVTAEKLREAVLAVLSDPRYAERLRKM 369
>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to
UDP-glucuronosyltransferase [Carbohydrate transport and
metabolism / Signal transduction mechanisms].
Length = 406
Score = 103 bits (258), Expect = 2e-23
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 470 HGVIFFSFGT---NVRFANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFP 526
+++ S GT V + VL A + ++ + D V VP NV+V ++ P
Sbjct: 237 RPIVYVSLGTVGNAVELLAI---VLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVP 293
Query: 527 QADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMD 586
Q ++L + HGG + EA Y GVP+V++P +DQ N ++E G G + +
Sbjct: 294 QLELLPR--ADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFE 351
Query: 587 SLDSDVVVEAVNAVLGDKTYAANAKRISAIMKSSP 621
L + + AVN VL D +Y A+R++ K
Sbjct: 352 ELTEERLRAAVNEVLADDSYRRAAERLAEEFKEED 386
Score = 66.3 bits (162), Expect = 2e-11
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 69 YVPH--LFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRV 126
YVP L + HGG + EA Y GVP+V++P +DQ N ++E G G
Sbjct: 291 YVPQLELL---PRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIA 347
Query: 127 IDMDSLDSDVVVEAVNAVLGDKTITDELE 155
+ + L + + AVN VL D + E
Sbjct: 348 LPFEELTEERLRAAVNEVLADDSYRRAAE 376
>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of
homologous glycosyltransferases involved in the final
stages of the biosynthesis of antibiotics vancomycin and
related chloroeremomycin. Gtfs transfer sugar moieties
from an activated NDP-sugar donor to the oxidatively
cross-linked heptapeptide core of vancomycin group
antibiotics. The core structure is important for the
bioactivity of the antibiotics.
Length = 401
Score = 94.0 bits (234), Expect = 2e-20
Identities = 59/313 (18%), Positives = 98/313 (31%), Gaps = 38/313 (12%)
Query: 309 DLVIIEGTFCGECLLAMGHKYKAPVINFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQ 368
DLV+ + + A P + L P P + L
Sbjct: 106 DLVVADPLAFAGAVAA--EALGIPAV---RLLLGPDTP----TSAFPPPLGRANLRLYAL 156
Query: 369 MNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTFLE 428
+ D L A L P V L S L
Sbjct: 157 LEAELWQD-LLGAWLRARRRRLGLPP-----------LSLLDGSD--VPELYGFSPAVLP 202
Query: 429 HDISIGVPQALTPNMLFTGGMHIKHAK-PLPEDLEKYMSDAPHGVIFFSFGTNVRFANMP 487
P +++ G P P +L + A ++ FG+ V P
Sbjct: 203 P-----PPDWPRFDLVTGYGFRDVPYNGPPPPELWLF-LAAGRPPVYVGFGSMVVRD--P 254
Query: 488 PYVLNAFVESFSKIKQKIL----WKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFLTHG 543
+ VE+ + + Q+ + W ++P NV V ++ P +L C + HG
Sbjct: 255 EALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVPHDWLLPR--CAAVVHHG 312
Query: 544 GIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGD 603
G + A GVP +++P F DQ + E G G +D L ++ + A+ +L
Sbjct: 313 GAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP 372
Query: 604 KTYAANAKRISAI 616
+ A + I
Sbjct: 373 PSRRRAAALLRRI 385
Score = 63.9 bits (156), Expect = 1e-10
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 69 YVPH--LFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRV 126
+VPH L C + HGG + A GVP +++P F DQ + E G G
Sbjct: 295 FVPHDWLL---PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPA 351
Query: 127 IDMDSLDSDVVVEAVNAVLGDKTI 150
+D L ++ + A+ +L +
Sbjct: 352 LDPRELTAERLAAALRRLLDPPSR 375
>gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein.
Length = 449
Score = 59.7 bits (144), Expect = 2e-09
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 464 YMSDAPHG-VIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILW--KTDVEVEVPPNVL 520
++ P G V++ +FG+ + ++ + + + +FS LW + E ++PP L
Sbjct: 257 WLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFS-----YLWVVRASEESKLPPGFL 311
Query: 521 ---------VRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNV 571
V W PQ +L +K F+TH G +S ME GVP+V MP ++DQ N
Sbjct: 312 ETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNA 371
Query: 572 LLMQE 576
+Q+
Sbjct: 372 KYIQD 376
Score = 40.0 bits (93), Expect = 0.004
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQE 120
F+TH G +S ME GVP+V MP ++DQ N +Q+
Sbjct: 339 FMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQD 376
>gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase.
Length = 470
Score = 53.9 bits (129), Expect = 2e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 519 VLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKG 578
++V W PQ +IL H++ FL+H G S +E+ GVP+V P +++Q+ N L+ E+
Sbjct: 337 LVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEE- 395
Query: 579 LGRVIDMDSLDSDVVV 594
+G + L S+ V+
Sbjct: 396 IGVAVRTSELPSEKVI 411
Score = 39.3 bits (91), Expect = 0.006
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDV 136
H++ FL+H G S +E+ GVP+V P +++Q+ N L+ E+ +G + L S+
Sbjct: 351 HRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEE-IGVAVRTSELPSEK 409
Query: 137 VV--EAVNAVLGDKTITDELE 155
V+ E V A L K + +E E
Sbjct: 410 VIGREEV-ASLVRKIVAEEDE 429
>gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase.
Length = 481
Score = 54.2 bits (130), Expect = 2e-07
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 520 LVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGL 579
+V +W PQA+IL H+ FLTH G S +E+ GVP++ P F++Q N L+ ++ L
Sbjct: 341 VVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE-L 399
Query: 580 GRVIDMDSLDSDVV---VEA-VNAVLGDKTYAANAKRISAIMKSSPVS 623
G + D + +EA V V+ ++ +++ + ++ +S
Sbjct: 400 GIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMS 447
Score = 36.5 bits (84), Expect = 0.053
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVN 142
FLTH G S +E+ GVP++ P F++Q N L+ ++ LG + D + +
Sbjct: 360 FLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE-LGIAVRSDDPKEVISRSKIE 418
Query: 143 AVLGDKTITDELE 155
A++ + +E E
Sbjct: 419 ALVRKVMVEEEGE 431
>gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase.
Length = 480
Score = 54.0 bits (130), Expect = 2e-07
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 455 KPLPEDLEKYMSDAPHGVIFFSFGTNVRFAN-----MPPYVLNAFVESFSKIKQKILWKT 509
KP + +E S P V++ SFGT V + VLN+ V SF + + +
Sbjct: 262 KPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGV-SFLWVMRPPHKDS 320
Query: 510 DVEVEVPPNVL---------VRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVM 560
VE V P + W PQ +L H + F+TH G +S MEA GVPVV
Sbjct: 321 GVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVC 380
Query: 561 MPGFSDQFQNVLLM 574
P + DQ + + +
Sbjct: 381 FPQWGDQVTDAVYL 394
Score = 39.4 bits (92), Expect = 0.006
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 76 GHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM 118
H + F+TH G +S MEA GVPVV P + DQ + + +
Sbjct: 352 AHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYL 394
>gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase.
Length = 468
Score = 53.5 bits (128), Expect = 2e-07
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 441 PNMLFTGGMHIKHAKPLPE-------DLEKYMSDAPHG-VIFFSFGTNVRFANMPPYVLN 492
P++ G + A+P PE +L K++ D P V+F FG+ R P V
Sbjct: 238 PSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRG--PLV-K 294
Query: 493 AFVESFSKIKQKILWKTDVEVEV------PPNVLVR--------NWFPQADILGHKNCRL 538
+ + LW E EV P L R W PQ +IL HK
Sbjct: 295 EIAHGLELCQYRFLWSLRTE-EVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGG 353
Query: 539 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM-QEKGLGRVIDMD-SLDSDVVVEA 596
F++H G +S +E+ + GVP+V P +++Q N LM +E L + +D + SD +V A
Sbjct: 354 FVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNA 413
Score = 36.2 bits (83), Expect = 0.056
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 76 GHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM-QEKGLGRVIDMD-SLD 133
HK F++H G +S +E+ + GVP+V P +++Q N LM +E L + +D +
Sbjct: 347 AHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH 406
Query: 134 SDVVVEA 140
SD +V A
Sbjct: 407 SDEIVNA 413
>gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase.
Length = 456
Score = 53.1 bits (127), Expect = 3e-07
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 520 LVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNV-LLMQEKG 578
+V W PQ IL H F+TH G +S +E GVPVV P ++DQ + LL+ G
Sbjct: 327 VVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFG 386
Query: 579 LGRVIDMDSLDSDVVVEAVNAVLGDKT---YAANAKRISAIMKSSPVSSL 625
+G + D++D ++ VE V + T AA+ +R +A +K +L
Sbjct: 387 IGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLAL 436
Score = 40.8 bits (95), Expect = 0.002
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNV-LLMQEKGLGRVIDMDSLDSD 135
H F+TH G +S +E GVPVV P ++DQ + LL+ G+G + D++D +
Sbjct: 340 HMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399
Query: 136 VVVEAV 141
+ VE V
Sbjct: 400 LKVEEV 405
>gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein.
Length = 475
Score = 51.7 bits (124), Expect = 8e-07
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 463 KYMSDAPHG-VIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILW--KTDVEVEVPPNV 519
+++ D P V+F FG+ ++P + ++ + + LW +T+ P
Sbjct: 272 RWLDDQPESSVVFLCFGS---LGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYE 328
Query: 520 --------------LVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFS 565
LV W PQ +IL HK F++H G +S +E+ + GVP+ P ++
Sbjct: 329 PLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYA 388
Query: 566 DQFQNVLLM-QEKGLGRVIDMD 586
+Q N M +E GL + +D
Sbjct: 389 EQQLNAFTMVKELGLAVELRLD 410
Score = 32.1 bits (73), Expect = 1.0
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM-QEKGLGRVIDMD 130
HK F++H G +S +E+ + GVP+ P +++Q N M +E GL + +D
Sbjct: 356 HKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLD 410
>gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase.
Length = 491
Score = 51.8 bits (124), Expect = 8e-07
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 519 VLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQE 576
+L++ W PQ IL H FLTH G +S +E GVP++ P F++QF N L+ E
Sbjct: 346 LLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVE 403
Score = 37.5 bits (87), Expect = 0.025
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQE 120
FLTH G +S +E GVP++ P F++QF N L+ E
Sbjct: 366 FLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVE 403
>gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein.
Length = 482
Score = 51.0 bits (122), Expect = 2e-06
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 38/179 (21%)
Query: 466 SDAPHGVIFFSFGTNVRFANMPPYVLNAFVE----SFSKIKQKILWKTDVEVEVP----- 516
S P VI+ SFG+ F N + + A +E +F + +K + + E +P
Sbjct: 281 SKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEE 340
Query: 517 ----PNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN-- 570
+++R W PQ IL H+ F+TH G +S +E G+P+V P ++QF N
Sbjct: 341 RTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEK 400
Query: 571 ----VL----------LMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISA 615
VL L++ KG D + + V +AV V+ + A +R+ A
Sbjct: 401 LVTQVLRTGVSVGAKKLVKVKG-------DFISREKVEKAVREVIVGE--EAEERRLRA 450
Score = 31.8 bits (72), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN 114
H+ F+TH G +S +E G+P+V P ++QF N
Sbjct: 361 HQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYN 398
>gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups.
Length = 472
Score = 49.5 bits (118), Expect = 4e-06
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVI 583
W PQ IL H++ FLTH G +S +E G +++ P ++Q N L+ K LG +
Sbjct: 346 WVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEV 405
Query: 584 DMD----SLDSDVVVEAVNAVLGD 603
D S SD V E+V + D
Sbjct: 406 PRDERDGSFTSDSVAESVRLAMVD 429
Score = 37.2 bits (86), Expect = 0.026
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMD----SL 132
H++ FLTH G +S +E G +++ P ++Q N L+ K LG + D S
Sbjct: 355 HESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSF 414
Query: 133 DSDVVVEAVNAVLGD 147
SD V E+V + D
Sbjct: 415 TSDSVAESVRLAMVD 429
>gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase.
Length = 455
Score = 48.9 bits (116), Expect = 6e-06
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 27/134 (20%)
Query: 466 SDAPHGVIFFSFGTNVRFANMPPYVL-NAFVESFSKIKQKILW----------------K 508
S VI+ SFGT V + L A +E K+ LW +
Sbjct: 257 SKTESSVIYVSFGTMVELSKKQIEELARALIEG----KRPFLWVITDKLNREAKIEGEEE 312
Query: 509 TDVEV------EVPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMP 562
T++E E+ ++ +W Q ++L H+ F+TH G S++E+ GVPVV P
Sbjct: 313 TEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP 372
Query: 563 GFSDQFQNVLLMQE 576
+SDQ N L++E
Sbjct: 373 MWSDQPANAKLLEE 386
Score = 39.7 bits (92), Expect = 0.005
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQE 120
H+ F+TH G S++E+ GVPVV P +SDQ N L++E
Sbjct: 343 HRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEE 386
>gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase
family protein.
Length = 477
Score = 48.7 bits (116), Expect = 8e-06
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 470 HGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKTDVEVE-------VPPN---- 518
H V++ FG+ V + A K +W V +P
Sbjct: 283 HKVVYVCFGSQVVLTK---EQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDR 339
Query: 519 -----VLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLL 573
+++R W PQ IL H+ FLTH G +S +E GVP++ P +DQF N L
Sbjct: 340 VAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASL 399
Query: 574 MQE 576
+ +
Sbjct: 400 LVD 402
Score = 33.3 bits (76), Expect = 0.41
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQE 120
H+ FLTH G +S +E GVP++ P +DQF N L+ +
Sbjct: 359 HRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVD 402
>gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional.
Length = 480
Score = 48.5 bits (116), Expect = 8e-06
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVL-LMQEKGLGRV 582
W PQ +IL H F+TH G +S +E+ +HGVP+ P +++Q N L+ + G+
Sbjct: 346 WAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVA 405
Query: 583 IDMDSLDSDVVVEA 596
+ +D D VEA
Sbjct: 406 MKVDR-KRDNFVEA 418
Score = 36.2 bits (84), Expect = 0.055
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVL-LMQEKGLGRVIDMDSLDSDVVVEA 140
F+TH G +S +E+ +HGVP+ P +++Q N L+ + G+ + +D D VEA
Sbjct: 361 FVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR-KRDNFVEA 418
>gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase.
Length = 451
Score = 47.4 bits (112), Expect = 2e-05
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 487 PPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFLTHGGIH 546
PP + ++ S + + L +T+ + ++V++W PQ +L HK F+TH G +
Sbjct: 309 PPELEKTELDLKSLLPEGFLSRTEDK-----GMVVKSWAPQVPVLNHKAVGGFVTHCGWN 363
Query: 547 SAMEAGYHGVPVVMMPGFSDQ-FQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKT 605
S +EA GVP+V P +++Q F V+++ E + I M+ ++ V +
Sbjct: 364 SILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIA--ISMNESETGFV-----------S 410
Query: 606 YAANAKRISAIMKSSPV 622
KR+ I+ PV
Sbjct: 411 STEVEKRVQEIIGECPV 427
Score = 33.5 bits (76), Expect = 0.38
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQ-FQNVLLMQE 120
HK F+TH G +S +EA GVP+V P +++Q F V+++ E
Sbjct: 350 HKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDE 394
>gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1.
Length = 317
Score = 43.0 bits (102), Expect = 3e-04
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 80 CRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQ---NVLLMQEKGLGRVIDMDSLDSDV 136
C + + G EA Y G P++++P QF+ N L ++ G G V+DM+ LD V
Sbjct: 250 CSAVICNAGFELLSEALYLGKPLLLVP-LDGQFEQTSNALYLERLGYGIVMDMEDLDPAV 308
Query: 137 V 137
+
Sbjct: 309 L 309
Score = 43.0 bits (102), Expect = 3e-04
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 536 CRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQ---NVLLMQEKGLGRVIDMDSLDSDV 592
C + + G EA Y G P++++P QF+ N L ++ G G V+DM+ LD V
Sbjct: 250 CSAVICNAGFELLSEALYLGKPLLLVP-LDGQFEQTSNALYLERLGYGIVMDMEDLDPAV 308
Query: 593 V 593
+
Sbjct: 309 L 309
>gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein.
Length = 481
Score = 41.7 bits (98), Expect = 0.001
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM-QEKGL 579
W PQ +L F+TH G +S +E+ + GVP+ P +++Q N M +E GL
Sbjct: 349 WAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGL 405
Score = 34.4 bits (79), Expect = 0.20
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM-QEKGL 123
F+TH G +S +E+ + GVP+ P +++Q N M +E GL
Sbjct: 364 FVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGL 405
>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein.
Length = 459
Score = 41.5 bits (98), Expect = 0.001
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 520 LVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN 570
LV W Q +L H + F TH G +S +EA + GVP++ P F DQ N
Sbjct: 326 LVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376
Score = 37.3 bits (87), Expect = 0.027
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN 114
F TH G +S +EA + GVP++ P F DQ N
Sbjct: 345 FWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376
>gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase
family protein.
Length = 451
Score = 39.6 bits (92), Expect = 0.005
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQ-EKGLGRV 582
W PQ ++L H F +H G +S +E+ GVP++ P SDQ N ++ +G
Sbjct: 331 WAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQ 390
Query: 583 IDMDSLDSDVVVEAVNAVLGDKTYAANAK---------RISAIMKSSPVSSLEKAVYW 631
++ D LD V AV ++ ++ K R S I S +SLE+ V++
Sbjct: 391 VEGD-LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHF 447
>gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide
beta-N-acetylglucosaminyltransferase. RM 8449890 RT The
final step of peptidoglycan subunit assembly in
Escherichia coli occurs in the cytoplasm. RA Bupp K, van
Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3
[Cell envelope, Biosynthesis and degradation of murein
sacculus and peptidoglycan].
Length = 348
Score = 36.5 bits (85), Expect = 0.037
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 550 EAGYHGVPVVMMP---GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDK-- 604
E GVP +++P DQ+ N +++ G G VI L + ++EA+ +L D
Sbjct: 265 ELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPAN 324
Query: 605 --TYAANAKRISA 615
A A++++
Sbjct: 325 LEAMAEAARKLAK 337
Score = 34.6 bits (80), Expect = 0.17
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 94 EAGYHGVPVVMMP---GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDK 148
E GVP +++P DQ+ N +++ G G VI L + ++EA+ +L D
Sbjct: 265 ELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP 322
>gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine
transferase [Cell envelope biogenesis, outer membrane].
Length = 357
Score = 35.8 bits (83), Expect = 0.062
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 550 EAGYHGVPVVMMP----GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGD-- 603
E GVP +++P Q N +++ G VI L + + E + +L +
Sbjct: 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPE 326
Query: 604 --KTYAANAKRI 613
K A NAK++
Sbjct: 327 KLKAMAENAKKL 338
Score = 32.7 bits (75), Expect = 0.73
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 94 EAGYHGVPVVMMP----GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVL 145
E GVP +++P Q N +++ G VI L + + E + +L
Sbjct: 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL 322
>gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-
acetylglucosaminyltransferase; Provisional.
Length = 357
Score = 35.5 bits (83), Expect = 0.073
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 566 DQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGD----KTYAANAKRIS 614
Q N + + G +I L + + E + +L D + A A+ +
Sbjct: 287 HQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALG 339
Score = 31.6 bits (73), Expect = 1.3
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 110 DQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDK 148
Q N + + G +I L + + E + +L D
Sbjct: 287 HQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325
>gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein. This model
represents nearly the full length of MJ1255 from
Methanococcus jannaschii and of an unpublished protein
from Vibrio cholerae, as well as the C-terminal half of
a protein from Methanobacterium thermoautotrophicum. A
small region (~50 amino acids) within the domain appears
related to a family of sugar transferases [Hypothetical
proteins, Conserved].
Length = 321
Score = 35.2 bits (81), Expect = 0.10
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 78 KNCRLFLTHGGIHSAMEAGYHGVPVVMMP--GFSDQFQNVLLMQEKGLGRVID 128
KN L +THGG EA G P++++P G +Q N + +++ G G ++
Sbjct: 246 KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298
Score = 35.2 bits (81), Expect = 0.10
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 534 KNCRLFLTHGGIHSAMEAGYHGVPVVMMP--GFSDQFQNVLLMQEKGLGRVID 584
KN L +THGG EA G P++++P G +Q N + +++ G G ++
Sbjct: 246 KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298
>gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase.
Length = 448
Score = 35.2 bits (81), Expect = 0.11
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 469 PHGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILW--KTDVEVEVPPNVLVR---- 522
P+ VI+ SFG+ V + + + +W +PP + R
Sbjct: 272 PNSVIYISFGSWVSPIGESN--VRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQ 329
Query: 523 ----NWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN 570
+W PQ ++L H+ +LTH G +S MEA ++ P DQF N
Sbjct: 330 GKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVN 381
>gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the
last enzyme involved in the intracellular phase of
peptidoglycan biosynthesis. It transfers
N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the
C4 hydroxyl of a lipid-linked N-acetylmuramoyl
pentapeptide (NAM). The resulting disaccharide is then
transported across the cell membrane, where it is
polymerized into NAG-NAM cell-wall repeat structure.
MurG belongs to the GT-B structural superfamily of
glycoslytransferases, which have characteristic N- and
C-terminal domains, each containing a typical Rossmann
fold. The two domains have high structural homology
despite minimal sequence homology. The large cleft that
separates the two domains includes the catalytic center
and permits a high degree of flexibility.
Length = 350
Score = 34.8 bits (81), Expect = 0.14
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 550 EAGYHGVPVVMMPGFS-----DQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGD- 603
E G+P +++P Q N + + G +I + L + + A+ +L D
Sbjct: 267 ELAALGLPAILIP-LPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325
Query: 604 ---KTYAANAKRIS 614
K A A+ ++
Sbjct: 326 ERLKAMAEAARSLA 339
Score = 31.3 bits (72), Expect = 1.5
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 94 EAGYHGVPVVMMPGFS-----DQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDK 148
E G+P +++P Q N + + G +I + L + + A+ +L D
Sbjct: 267 ELAALGLPAILIP-LPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325
>gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein.
Length = 446
Score = 34.2 bits (78), Expect = 0.25
Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 46/183 (25%)
Query: 427 LEHDISIGVPQALTPNMLFTGGMHI----KHAKPLPEDLEKYMSD-APHGVIFFSFGTNV 481
LE ++ + + +L TG M K KPL + +++ P V+F +FGT
Sbjct: 204 LEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQF 263
Query: 482 RF---------------------ANMPP----YVLNAFVESFS-KIKQK-ILWKTDVEVE 514
F A MPP V A E F ++K + I+W+
Sbjct: 264 FFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWE------ 317
Query: 515 VPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM 574
W Q IL H + F+ H G S E+ +V +P +DQ L+
Sbjct: 318 --------GWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLL 369
Query: 575 QEK 577
E+
Sbjct: 370 TEE 372
>gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28
C-terminal domain. The glycosyltransferase family 28
includes monogalactosyldiacylglycerol synthase (EC
2.4.1.46) and UDP-N-acetylglucosamine transferase (EC
2.4.1.-). Structural analysis suggests the C-terminal
domain contains the UDP-GlcNAc binding site.
Length = 167
Score = 32.3 bits (74), Expect = 0.43
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 538 LFLTHGGIHSAMEAGYHGVPVVMMP----GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVV 593
L ++ G + E G P +++P Q N L + + G V+ L + +
Sbjct: 75 LVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKL 134
Query: 594 VEAV-NAVLGDKTYAANAKR 612
VEA+ +L K
Sbjct: 135 VEALLKLLLKPLRLYEMNKA 154
Score = 30.8 bits (70), Expect = 1.3
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 82 LFLTHGGIHSAMEAGYHGVPVVMMP----GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVV 137
L ++ G + E G P +++P Q N L + + G V+ L + +
Sbjct: 75 LVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKL 134
Query: 138 VEAV 141
VEA+
Sbjct: 135 VEAL 138
>gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein.
Length = 442
Score = 33.5 bits (76), Expect = 0.44
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 443 MLFTGGMHIKH--AKPLPEDLEKYMSD-APHGVIFFSFGTNV-----RFANMP------- 487
+L TG M + +KPL E ++S P V+F S G+ + +F +
Sbjct: 221 VLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTG 280
Query: 488 -PYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFLTHGGIH 546
P+++ S Q+ L + E V+ W Q IL H + F+ H G
Sbjct: 281 LPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPG 340
Query: 547 SAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK 577
+ E+ +V++P SDQ LM E+
Sbjct: 341 TIWESLVSDCQMVLIPFLSDQVLFTRLMTEE 371
>gnl|CDD|235589 PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase;
Reviewed.
Length = 425
Score = 33.3 bits (77), Expect = 0.51
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 539 FLTHGGIHSAMEAGYHGVPVVMMP---GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVE 595
+ GG H+ +E GVPV+ P F + F+ +L Q +V D + L +
Sbjct: 329 LVKRGG-HNPLEPAAFGVPVISGPHTFNFKEIFERLL--QAGAAIQVEDAEDL-----AK 380
Query: 596 AVNAVLGDKTYAA 608
AV +L D
Sbjct: 381 AVTYLLTDPDARQ 393
Score = 31.7 bits (73), Expect = 1.3
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 83 FLTHGGIHSAMEAGYHGVPVVMMP---GFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVE 139
+ GG H+ +E GVPV+ P F + F+ +L Q +V D + L +
Sbjct: 329 LVKRGG-HNPLEPAAFGVPVISGPHTFNFKEIFERLL--QAGAAIQVEDAEDL-----AK 380
Query: 140 AVNAVLGD 147
AV +L D
Sbjct: 381 AVTYLLTD 388
>gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein.
Length = 453
Score = 33.1 bits (75), Expect = 0.55
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK 577
W Q IL H + F++H G S E+ +V++P DQ N L+ ++
Sbjct: 324 WVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDE 377
>gnl|CDD|233877 TIGR02466, TIGR02466, conserved hypothetical protein. This family
consists of uncharacterized proteins in Caulobacter
crescentus CB15, Bdellovibrio bacteriovorus HD100,
Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi
DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The
context of nearby genes differs substantially between
members and does point to any specific biological role
[Hypothetical proteins, Conserved].
Length = 201
Score = 30.9 bits (70), Expect = 1.5
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
Query: 437 QALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPHGV--IFFSFGTNVRFANMPPYVLNA- 493
Q N+L GG H H P Y P I F P + NA
Sbjct: 96 QKAWVNILPQGGTHSPHLHPGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAK 155
Query: 494 -FVESFSKIKQK----ILWKTDVEVEVPPN 518
V+ F + + +L+++ + EVPPN
Sbjct: 156 RAVQRFVYVPPQEGRVLLFESWLRHEVPPN 185
>gnl|CDD|226807 COG4370, COG4370, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 412
Score = 31.4 bits (71), Expect = 1.9
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 20/75 (26%)
Query: 514 EVPPNVLV-----RNWFPQADILGHKNCRLFLT---------HGGIHSAM------EAGY 553
E+P +L + W P AD G NC L+L+ M +A
Sbjct: 269 ELPLLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSFADILHAADAALGMAGTATEQAVG 328
Query: 554 HGVPVVMMPGFSDQF 568
G PV+ PG Q+
Sbjct: 329 LGKPVIGFPGQGPQY 343
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1.
Mutations in this domain of human PIGA lead to disease
(Paroxysmal Nocturnal haemoglobinuria). Members of this
family transfer activated sugars to a variety of
substrates, including glycogen, Fructose-6-phosphate and
lipopolysaccharides. Members of this family transfer
UDP, ADP, GDP or CMP linked sugars. The eukaryotic
glycogen synthases may be distant members of this
family.
Length = 158
Score = 30.3 bits (69), Expect = 2.1
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 517 PNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVM--MPGFSDQFQNVLLM 574
P+ + + AD+ G+ +EA GVPV+ + G ++ ++
Sbjct: 68 PDEDLIELYRIADLFVLP---SRYEGFGL-VLLEAMAAGVPVIATDVGGPAEIVKDG--- 120
Query: 575 QEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKR 612
G ++ D D++ + EA+ +L D+
Sbjct: 121 ---ETGLLV--DPGDAEALAEAIEKLLKDEELRERLGE 153
>gnl|CDD|224436 COG1519, KdtA, 3-deoxy-D-manno-octulosonic-acid transferase [Cell
envelope biogenesis, outer membrane].
Length = 419
Score = 30.7 bits (70), Expect = 2.8
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 22/113 (19%)
Query: 522 RNWFPQADI--LGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMP---GFSDQFQNVLLMQ- 575
+ ADI +G + GG H+ +E G PV+ P FSD + +L
Sbjct: 312 GLLYGIADIAFVG----GSLVPIGG-HNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGA 366
Query: 576 ------EKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAK---RISAIMKS 619
L + +++ D D A G + A N R +K
Sbjct: 367 GLQVEDADLLAKAVELLLADEDKREAYGRA--GLEFLAQNRGALARTLEALKP 417
>gnl|CDD|173867 cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding
component of an uncharacterized ABC-type
nickel/dipeptide/oligopeptide-like import system
contains the type 2 periplasmic binding fold. This CD
represents the substrate-binding domain of an
uncharacterized ATP-binding cassette (ABC) type
nickel/dipeptide/oligopeptide-like transporter. The
oligopeptide-binding protein OppA and the
dipeptide-binding protein DppA show significant sequence
similarity to NikA, the initial nickel receptor. The
DppA binds dipeptides and some tripeptides and is
involved in chemotaxis toward dipeptides, whereas the
OppA binds peptides of a wide range of lengths (2-35
amino acid residues) and plays a role in recycling of
cell wall peptides, which precludes any involvement in
chemotaxis. Most of other periplasmic binding proteins
are comprised of only two globular subdomains
corresponding to domains I and III of the
dipeptide/oligopeptide binding proteins. The structural
topology of these domains is most similar to that of the
type 2 periplasmic binding proteins (PBP2), which are
responsible for the uptake of a variety of substrates
such as phosphate, sulfate, polysaccharides,
lysine/arginine/ornithine, and histidine. The PBP2 bind
their ligand in the cleft between these domains in a
manner resembling a Venus flytrap. After binding their
specific ligand with high affinity, they can interact
with a cognate membrane transport complex comprised of
two integral membrane domains and two cytoplasmically
located ATPase domains. This interaction triggers the
ligand translocation across the cytoplasmic membrane
energized by ATP hydrolysis. Besides transport
proteins, the PBP2 superfamily includes the
ligand-binding domains from ionotropic glutamate
receptors, LysR-type transcriptional regulators, and
unorthodox sensor proteins involved in signal
transduction.
Length = 472
Score = 29.8 bits (68), Expect = 4.8
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 94 EAGYHGVPVVMM--PGFSDQFQNVLLMQE--KGLGRVIDMDSLD 133
EAGY G P+V++ ++ + L+ + K G +D+ +D
Sbjct: 326 EAGYDGEPIVILTPTDYAYLYNAALVAAQQLKAAGFNVDLQVMD 369
Score = 29.8 bits (68), Expect = 4.8
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 550 EAGYHGVPVVMM--PGFSDQFQNVLLMQE--KGLGRVIDMDSLD 589
EAGY G P+V++ ++ + L+ + K G +D+ +D
Sbjct: 326 EAGYDGEPIVILTPTDYAYLYNAALVAAQQLKAAGFNVDLQVMD 369
>gnl|CDD|165468 PHA03201, PHA03201, uracil DNA glycosylase; Provisional.
Length = 318
Score = 29.5 bits (66), Expect = 5.6
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 162 SPPRSPR------LLSPPVPGEIPPPSAISGGPTARNFRRCR 197
+PPRSP SPP PG PPP +G R RR R
Sbjct: 21 TPPRSPDASPEETPPSPPGPGAEPPPGRAAGPAAPR--RRPR 60
>gnl|CDD|223096 COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetases [Translation,
ribosomal structure and biogenesis].
Length = 435
Score = 29.5 bits (67), Expect = 7.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 187 GPT--ARNFRRCRHASE--MSNPEMAVYLEKEHLRDAEESDYHLMEEII 231
GPT A RH SE M +PEMA + + AEE +L ++++
Sbjct: 206 GPTFRAEKSNTRRHLSEFWMLDPEMAFADLNDVMDLAEELIKYLFKKVL 254
>gnl|CDD|222868 PHA02547, 55, RNA polymerase sigma factor; Provisional.
Length = 179
Score = 28.5 bits (64), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 386 FLTNLFYYPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTFLEHDIS 432
F+ + K++A+ KYF + Y DM+ TF++ DI
Sbjct: 105 FVQRIKKEKKEMAIKYKYFLHNVYDEV--DDDMVAIADETFIQ-DIY 148
>gnl|CDD|235944 PRK07135, dnaE, DNA polymerase III DnaE; Validated.
Length = 973
Score = 29.7 bits (67), Expect = 7.8
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 200 SEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNE 258
S E AVY+++ L AE+++Y +I++ NNKE S+ FD +F ++E
Sbjct: 137 SNDPKIENAVYVQERKLLFAEDNEYL---KILNKIGNNKEENSNFKFFDFEKWFEDIDE 192
>gnl|CDD|233692 TIGR02031, BchD-ChlD, magnesium chelatase ATPase subunit D. This
model represents one of two ATPase subunits of the
trimeric magnesium chelatase responsible for insertion
of magnesium ion into protoporphyrin IX. This is an
essential step in the biosynthesis of both chlorophyll
and bacteriochlorophyll. This subunit is found in green
plants, photosynthetic algae, cyanobacteria and other
photosynthetic bacteria. Unlike subunit I (TIGR02030),
this subunit is not found in archaea [Biosynthesis of
cofactors, prosthetic groups, and carriers, Chlorophyll
and bacteriochlorphyll].
Length = 589
Score = 29.4 bits (66), Expect = 8.2
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 142 NAVLGDKT-ITDE-LETVCGLLSPPRSPRLLSP-PVPGEIPPPSAISGGPTARNFRRCRH 198
+A L +T +T+E L+ L+ PR+ RL P P P PPP +
Sbjct: 237 HAALHGRTEVTEEDLKLAVELVLLPRATRLPEPEPQPPPPPPPPEPPEPEEEPDEPD--- 293
Query: 199 ASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDA 244
++ + E + +E + DA E+D L + I+ T + A
Sbjct: 294 QTDPDDGEETDQIPEELMFDAVEAD--LPDNILATLQTVQRRRGRA 337
>gnl|CDD|176918 cd08909, START_STARD13-like, C-terminal lipid-binding START domain
of mammalian STARD13 and related proteins, which also
have an N-terminal Rho GTPase-activating protein
(RhoGAP) domain. This subgroup includes the
steroidogenic acute regulatory protein (StAR)-related
lipid transfer (START) domains of STARD13 (also known as
DLC-2, Arhgap37, and SDCCAG13) and related proteins. It
belongs to the START domain family, and in turn to the
SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain
superfamily of proteins that bind hydrophobic ligands.
SRPBCC domains have a deep hydrophobic ligand-binding
pocket. Proteins belonging to this subfamily also have a
RhoGAP domain. The precise function of the START domain
in this subgroup is unclear.
Length = 205
Score = 28.7 bits (64), Expect = 9.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 506 LWKTDVEVEVPPNVLV 521
LWK VEVE PP+V++
Sbjct: 53 LWKVSVEVEAPPSVVL 68
>gnl|CDD|173571 PTZ00378, PTZ00378, hypothetical protein; Provisional.
Length = 518
Score = 29.1 bits (65), Expect = 9.6
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 125 RVIDMDSLDSDVVVEAVNAVLGDKTITDELETVCGLLSP-PRSPRLLSPPVPGEIPPP 181
R + L S E V+ + + DEL L P+ R+ PP+P + P
Sbjct: 452 RFLCSGGLFSAHQCEVVSQLA---SRQDELTHSRMLAPEAPKFNRMDLPPLPTDEVPE 506
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.139 0.425
Gapped
Lambda K H
0.267 0.0752 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 36,962,368
Number of extensions: 3738482
Number of successful extensions: 3717
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3696
Number of HSP's successfully gapped: 90
Length of query: 703
Length of database: 10,937,602
Length adjustment: 104
Effective length of query: 599
Effective length of database: 6,324,786
Effective search space: 3788546814
Effective search space used: 3788546814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.0 bits)