RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16993
(703 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 137 bits (344), Expect = 2e-35
Identities = 53/426 (12%), Positives = 121/426 (28%), Gaps = 32/426 (7%)
Query: 230 IIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFRNRTHADLIGLFHSLCLAQME 289
++ N N +++ F R D+ + + +
Sbjct: 37 FSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYV--FAGRPQEDIELFTRAAPESFRQ 94
Query: 290 QVLRTPEIQTFVQRDDSHFDLVIIEGTFCGECLLAMGHKYKAPVINFQPLGYWPSNYYVY 349
++ V ++ + F A + + S +
Sbjct: 95 GMVM------AVAETGRPVSCLVADA-FIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 147
Query: 350 GNLLSPAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGY 409
+ + + +NF + + F + ++ + +
Sbjct: 148 DEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQ---- 203
Query: 410 QSRPPMVDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAP 469
P + S L+ ++ + L + I +P
Sbjct: 204 --VLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPPVVPNTTGCLQWLKE 261
Query: 470 HGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKT----------DVEVEVPPNV 519
+ + PP + A E+ + +W +
Sbjct: 262 RKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYG 321
Query: 520 LVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-G 578
+V W PQA++L H+ F+TH G +S E+ GVP++ P F DQ N ++++
Sbjct: 322 MVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 381
Query: 579 LGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISAI--MKSSPV----SSLEKAVYWT 632
+G I+ ++ + +L + + + A+ V SS E +
Sbjct: 382 IGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLV 441
Query: 633 EYVIRH 638
+ V +
Sbjct: 442 DLVSKP 447
Score = 66.3 bits (160), Expect = 5e-12
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GLGRVIDMDSLDSD 135
H+ F+TH G +S E+ GVP++ P F DQ N ++++ +G I+
Sbjct: 335 HEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 394
Query: 136 VVVEAVNAVLGDK 148
++ + +L +
Sbjct: 395 GLMSCFDQILSQE 407
Score = 37.4 bits (85), Expect = 0.005
Identities = 4/43 (9%), Positives = 11/43 (25%)
Query: 23 AFFPMALNSHIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNY 65
A ++H P ++ L+ + +
Sbjct: 5 AVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIF 47
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 118 bits (295), Expect = 3e-29
Identities = 44/324 (13%), Positives = 97/324 (29%), Gaps = 27/324 (8%)
Query: 303 RDDSHFDLVIIEGTFCGECLLAMGHKYKAPVINFQPLGYWPSNYYVYGNLLSPAVIPDFR 362
+ + + + A G + A + PS Y+ L PA
Sbjct: 92 AEGCAAVVAVGDLAA------ATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTT 145
Query: 363 LPSTTQMNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGYQSRPPMVDMLRNI 422
T W + + L ++ G +
Sbjct: 146 PGVTDIRVLWEERAARFADRYGPTL-------------NRRRAEIGLPPVEDVFGYGHGE 192
Query: 423 SMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPHGVIFFSFGTNVR 482
+ + + + TG + +PLP +LE ++ A + FG++
Sbjct: 193 RPLLAADPVLAPLQ--PDVDAVQTGAWLLSDERPLPPELEAFL-AAGSPPVHIGFGSSSG 249
Query: 483 F--ANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFL 540
A+ + A ++ W V + + + + +
Sbjct: 250 RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRR--VAAVI 307
Query: 541 THGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAV 600
HG + A GVP +++P +DQ + G+G D + + + A+ V
Sbjct: 308 HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV 367
Query: 601 LGDKTYAANAKRISAIMKSSPVSS 624
L + A A+ ++ ++ + ++
Sbjct: 368 LAPE-TRARAEAVAGMVLTDGAAA 390
Score = 69.7 bits (169), Expect = 3e-13
Identities = 20/125 (16%), Positives = 40/125 (32%)
Query: 24 FFPMALNSHIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVPHLFNGHKNCRLF 83
+ K + RR + P D+ + + +
Sbjct: 247 SSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAV 306
Query: 84 LTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNA 143
+ HG + A GVP +++P +DQ + G+G D + + + A+
Sbjct: 307 IHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTT 366
Query: 144 VLGDK 148
VL +
Sbjct: 367 VLAPE 371
Score = 31.6 bits (70), Expect = 0.31
Identities = 5/40 (12%), Positives = 10/40 (25%)
Query: 32 HIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVP 71
++ L L G + + +VP
Sbjct: 13 DVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVP 52
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 117 bits (293), Expect = 6e-29
Identities = 41/294 (13%), Positives = 90/294 (30%), Gaps = 12/294 (4%)
Query: 331 APVINFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNL 390
+ LG + + + P L + + N
Sbjct: 108 GVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWE-------RNNQ 160
Query: 391 FYYPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMH 450
Y + L++ + G + ++ D + Q + + TG
Sbjct: 161 SAYQRYGGLLNSHRDAIGL-PPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWI 219
Query: 451 IKHAKPLPEDLEKYMSDAPHGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKTD 510
+ +PL +L ++ P ++ FG+ A+ ++A ++ W
Sbjct: 220 LPDERPLSPELAAFLDAGPP-PVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADL 278
Query: 511 VEVEVPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQN 570
V + + + G + HGG + A G P +++P +DQ
Sbjct: 279 VLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYY 336
Query: 571 VLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISAIMKSSPVSS 624
+ E G+G D D + A+ L + A A ++ +++ +
Sbjct: 337 AGRVAELGVGVAHDGPIPTFDSLSAALATALTPE-THARATAVAGTIRTDGAAV 389
Score = 67.1 bits (162), Expect = 2e-12
Identities = 20/118 (16%), Positives = 38/118 (32%)
Query: 32 HIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVPHLFNGHKNCRLFLTHGGIHS 91
++ + RR + P + + + + HGG +
Sbjct: 254 AVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGT 313
Query: 92 AMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKT 149
A G P +++P +DQ + E G+G D D + A+ L +T
Sbjct: 314 THVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPET 371
Score = 30.8 bits (68), Expect = 0.52
Identities = 6/40 (15%), Positives = 12/40 (30%)
Query: 32 HIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVP 71
+P L + G +V + + +VP
Sbjct: 13 DTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVP 52
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 109 bits (272), Expect = 7e-26
Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 21/343 (6%)
Query: 295 PEIQTFVQRDDSHFDLVIIEGTFCGECLLAMGHKYKAPVINFQPLGYWPSNYYVYGNLLS 354
P ++ ++ S+ + ++ FC + + + S N
Sbjct: 99 PHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 158
Query: 355 PAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGYQSRPP 414
V D + D Y L +++ G
Sbjct: 159 EEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGI-IVNT 217
Query: 415 MVDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPHGVIF 474
D+ ++ +HD I A+ P + G + K + + + K++ + P +
Sbjct: 218 FSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVV 277
Query: 475 FSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPP-----------NVLVRN 523
F + P + + LW E +V P ++
Sbjct: 278 FLC-FGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICG 336
Query: 524 WFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GLGRV 582
W PQ ++L HK F++H G +S +E+ + GVP++ P +++Q N + ++ G+G
Sbjct: 337 WAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLG 396
Query: 583 IDMDSLDSDVVV------EAVNAVL-GDKTYAANAKRISAIMK 618
+ +D VV + + ++ D + + + +
Sbjct: 397 LRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSR 439
Score = 57.4 bits (137), Expect = 3e-09
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 65 YTYVYVPHLFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GL 123
+ + HK F++H G +S +E+ + GVP++ P +++Q N + ++ G+
Sbjct: 335 CGWAPQVEVLA-HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 393
Query: 124 GRVIDMDSLDSDVVVEA 140
G + +D VV A
Sbjct: 394 GLGLRVDYRKGSDVVAA 410
Score = 39.3 bits (90), Expect = 0.001
Identities = 39/364 (10%), Positives = 83/364 (22%), Gaps = 7/364 (1%)
Query: 22 LAFFPMALNSHIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVPHLFNGHKNCR 81
L F P H+ L+ N+ ++ F + Y+ + +
Sbjct: 10 LIFIPAPGIGHLASALEFAKLLTNHDKNLY-ITVFCIKFPGMPFADSYIKSVLASQPQIQ 68
Query: 82 LFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVV-VEA 140
L E ++ +V + L + LD V +
Sbjct: 69 LIDLPEVEPPPQE-LLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMID 127
Query: 141 VNAVLGDKTITDELETVCGLLSPPRSPRLLSPPVPGEIPPPSAISGGPTARNF-RRCRHA 199
V G + V L V + + P N
Sbjct: 128 VGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLP 187
Query: 200 SEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEE 259
N + + ++ ++ ++ +A D D+ + + +
Sbjct: 188 DACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLD 247
Query: 260 TASEIRANFRNRTHADLIGLFHSLCLAQMEQVLRTPEIQTFVQRDDSHFDLVIIEGTFCG 319
+ H ++ V ++ +
Sbjct: 248 LKGQPNPKLDQAQHDLILKWLDEQP--DKSVVFLCFGSMGVSFGPSQIREIALGLKHSGV 305
Query: 320 ECLLAMGHKYKAPVINFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQMNFWGR-LDSL 378
L + + K F + G V+ + W L+S+
Sbjct: 306 RFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESM 365
Query: 379 WFAV 382
WF V
Sbjct: 366 WFGV 369
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 106 bits (264), Expect = 3e-25
Identities = 35/248 (14%), Positives = 82/248 (33%), Gaps = 9/248 (3%)
Query: 388 TNLFYYPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTFLEHDISIGVPQALTPNMLFTG 447
N ++ + G + D +L D + + + TG
Sbjct: 141 YNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYT-DQPWLAADPVLSPLRPTDLGTVQTG 199
Query: 448 GMHIKHAKPLPEDLEKYMSDAPHGVIFFSFGTNV-RFANMPPYVLNAFVESFSKIKQKIL 506
+ +PL +LE +++ V ++ A+ + A S +I
Sbjct: 200 AWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRG 259
Query: 507 WKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSD 566
W V + + V ++ G + H + + A G+P +++ D
Sbjct: 260 WADLVLPDDGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVD 317
Query: 567 ----QFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDKTYAANAKRISAIMKSSPV 622
Q + + E G+G +D D + A++ L + A A ++ +++
Sbjct: 318 NVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPE-IRARATTVADTIRADGT 376
Query: 623 SSLEKAVY 630
+ + ++
Sbjct: 377 TVAAQLLF 384
Score = 53.9 bits (128), Expect = 3e-08
Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Query: 40 LYELSRRGHNVTEVSSFPPPPGVDNYTYV-YVPHLFNGHKNCRLFLTHGGIHSAMEAGYH 98
+ RR + P + V V + + H + + A
Sbjct: 247 VRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGR-VAAAIHHDSAGTTLLAMRA 305
Query: 99 GVPVVMMPGFSD----QFQNVLLMQEKGLGRVIDMDSLDSDVVVEAVNAVLGDK 148
G+P +++ D Q + + E G+G +D D + A++ L +
Sbjct: 306 GIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPE 359
Score = 30.8 bits (68), Expect = 0.56
Identities = 6/40 (15%), Positives = 8/40 (20%)
Query: 32 HIKPFQPLLYELSRRGHNVTEVSSFPPPPGVDNYTYVYVP 71
+P L L G + VP
Sbjct: 13 DTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVP 52
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 105 bits (262), Expect = 1e-24
Identities = 50/389 (12%), Positives = 116/389 (29%), Gaps = 45/389 (11%)
Query: 268 FRNRTHADLIGLFHSLCLAQMEQVLRTPEIQTFVQRDDSHFDLVIIEGTFCGECLLAMGH 327
D+ L S+ ++ + + ++ +
Sbjct: 73 GDGDVSQDVPTLCQSVRKNFLKPYCEL--LTRLNHSTNVPPVTCLVSDCCM-SFTIQAAE 129
Query: 328 KYKAPVINFQPLGYWPSNYYVYGNLL---------------------SPAVIPDFRLPST 366
+++ P + + ++ IP +
Sbjct: 130 EFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRL 189
Query: 367 TQMNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTF 426
+ + R + + + F+ K ++ F + + +I
Sbjct: 190 KDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPIG 249
Query: 427 LEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPHGVIFFSFGTNVRFANM 486
TP + + K E L+ S P V++ +FG+
Sbjct: 250 PLPS-----LLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 304
Query: 487 PPYVLNAFVESF-----------SKIKQKILWKTDVEVEVPPNVLVRNWFPQADILGHKN 535
+ + I +++ ++ E+ L+ +W PQ +L H +
Sbjct: 305 QLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPS 364
Query: 536 CRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GLGRVIDMDSLDSDVVV 594
FLTH G +S E+ GVP++ P F+DQ + + + +G ID + + + +
Sbjct: 365 IGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN-VKREELA 423
Query: 595 EAVNAVLGD---KTYAANAKRISAIMKSS 620
+ +N V+ K A + + +
Sbjct: 424 KLINEVIAGDKGKKMKQKAMELKKKAEEN 452
Score = 61.3 bits (147), Expect = 2e-10
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 77 HKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GLGRVIDMDSLDSD 135
H + FLTH G +S E+ GVP++ P F+DQ + + + +G ID + + +
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN-VKRE 420
Query: 136 VVVEAVNAVLGD 147
+ + +N V+
Sbjct: 421 ELAKLINEVIAG 432
Score = 36.3 bits (82), Expect = 0.013
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 23 AFFPMALNSHIKPFQPLLYELSRRGHNVTEVSSFPP 58
P + HI P L L RG ++T V++
Sbjct: 5 VMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYN 40
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 102 bits (253), Expect = 1e-23
Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 48/382 (12%)
Query: 273 HADLIGLFHSLCLAQMEQVLRTPEIQTFVQRDDSHFDLVIIEGTFCGECLLAMGHKYKAP 332
I L + ++ +V + + ++ F + ++ P
Sbjct: 77 IESRISLTVTRSNPELRKVFDS-------FVEGGRLPTALVVDLFGT-DAFDVAVEFHVP 128
Query: 333 VINFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNLFY 392
F P +++++ L V +FR T + G + D
Sbjct: 129 PYIFYPTTANVLSFFLHLPKLDETVSCEFR-ELTEPLMLPGCVPVAGKDFLDPAQDRKDD 187
Query: 393 YPKQVALMDKYFKYPGYQSRPPMVDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMHIK 452
K + K +K ++ N + + P L G
Sbjct: 188 AYKWLLHNTKRYKEAEGILVNTFFELEPNAIKAL--QEPGLDKPPVYPVGPLVNIGKQEA 245
Query: 453 HAKPLPEDLEKYMSDAPHGVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILW----- 507
E L+ + V++ SFG+ + LN + +Q+ LW
Sbjct: 246 KQTEESECLKWLDNQPLGSVLYVSFGS---GGTLTCEQLNELALGLADSEQRFLWVIRSP 302
Query: 508 -------------KTDVEVEVPP---------NVLVRNWFPQADILGHKNCRLFLTHGGI 545
+TD +PP ++ W PQA +L H + FLTH G
Sbjct: 303 SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGW 362
Query: 546 HSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEK-GLG---RVIDMDSLDSDVVVEAVNAVL 601
+S +E+ G+P++ P +++Q N +L+ E R D + + V V ++
Sbjct: 363 NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLM 422
Query: 602 GD---KTYAANAKRISAIMKSS 620
K K +
Sbjct: 423 EGEEGKGVRNKMKELKEAACRV 444
Score = 58.2 bits (139), Expect = 2e-09
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 59 PPGVDNYTYVYVPHLFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLM 118
G + + H + FLTH G +S +E+ G+P++ P +++Q N +L+
Sbjct: 333 KRGFVIPFWAPQAQVLA-HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLL 391
Query: 119 QEK-GLG---RVIDMDSLDSDVVVEAVNAVLGDK 148
E R D + + V V ++ +
Sbjct: 392 SEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE 425
Score = 35.5 bits (80), Expect = 0.021
Identities = 29/212 (13%), Positives = 53/212 (25%), Gaps = 3/212 (1%)
Query: 23 AFFPMALNSHIKPFQPLLYEL-SRRGHNVTEVSSFPPPPGVDNYTYV-YVPHLFNGHKNC 80
A P H+ P L G VT V + PP T + +P +
Sbjct: 5 AIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLP 64
Query: 81 RLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVLLMQEKGLGRVIDMDSLDSDVVVEA 140
+ LT + +E+ P F + + + ++ V
Sbjct: 65 PVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAV 123
Query: 141 VNAVLGDKTITDELETVCGLLSPPRSPRLLSPPVPGEIPPPSAISGGPTARNFRRCRHAS 200
V + L P+ +S P P A
Sbjct: 124 EFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQD 183
Query: 201 EMSNPEMAVYLEKEHLRDAEESDYHLMEEIIH 232
+ + + ++AE + E+
Sbjct: 184 RKDDAYKWLLHNTKRYKEAEGILVNTFFELEP 215
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Length = 351
Score = 50.5 bits (119), Expect = 4e-07
Identities = 30/269 (11%), Positives = 69/269 (25%), Gaps = 5/269 (1%)
Query: 351 NLLSPAVIPDFRLPSTTQMNFWGRLDSLWFAVTDLFLTNLFYYPKQVALMDKYFKYPGYQ 410
+ + P + Q + + + +L +
Sbjct: 64 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG 123
Query: 411 SRPPMVDMLRNISMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPH 470
L I+ ++ + N + T + + + E +
Sbjct: 124 IAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVV 183
Query: 471 GVIFFSFGTNVRFANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFPQADI 530
G + N + + ++ K E F
Sbjct: 184 GGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMA 243
Query: 531 LGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMP---GFSDQFQNVLLMQEKGLGRVIDMDS 587
+ + + G + E G+P + +P Q+ N L +++ G ++I+
Sbjct: 244 AAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ 303
Query: 588 LDSDVVVEAVNAVLGDK--TYAANAKRIS 614
L D V + + T A A+ S
Sbjct: 304 LSVDAVANTLAGWSRETLLTMAERARAAS 332
Score = 42.0 bits (97), Expect = 2e-04
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 67 YVYVPHLFNGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMP---GFSDQFQNVLLMQEKGL 123
++ + + + + G + E G+P + +P Q+ N L +++ G
Sbjct: 236 TEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGA 295
Query: 124 GRVIDMDSLDSDVVVEAVNAVLGDK 148
++I+ L D V + +
Sbjct: 296 AKIIEQPQLSVDAVANTLAGWSRET 320
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ
{Enterobacter aerogenes [TaxId: 548]}
Length = 271
Score = 30.8 bits (68), Expect = 0.47
Identities = 8/50 (16%), Positives = 13/50 (26%)
Query: 523 NWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQNVL 572
N ++ + G HS Y + +PG Q
Sbjct: 174 NGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCH 223
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 623
Score = 29.1 bits (64), Expect = 1.9
Identities = 38/303 (12%), Positives = 77/303 (25%), Gaps = 30/303 (9%)
Query: 253 FLTVNEETASEIRANFRNRTHADL----IGLFHSLCLAQMEQVLRTPEIQTFVQRDDSHF 308
+T + A E+R ++ I FHS+C+ ++ + R +
Sbjct: 61 AITFTNKAAREMRERVQSLLGGAAEDVWISTFHSMCVRI---------LRRDIDRIGINR 111
Query: 309 DLVIIEGTFCGECLLAMGHKYKAPVINFQPLGYWPSNYYVYGNLLSPAVIPDFRLPSTTQ 368
+ I++ T + + + F+P + LL P
Sbjct: 112 NFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRYYEKVVS 171
Query: 369 MNFWGRLDSLW------FAVTDLFLTNLFYYPKQVA--LMDKYFKYPGYQSRPPMVDMLR 420
+ L F + LF V K+ + +
Sbjct: 172 DVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYT 231
Query: 421 NISMTFLEHDISIGVPQALTPNMLFTGGMHIKHAKPLPEDLEKYMSDAPHGVIFFSFGTN 480
+ V A + G +++ + D P+ + N
Sbjct: 232 LVKKLAERFQNICAVGDADQSIYRWRGAD--------IQNILSFERDYPNAKVIL-LEQN 282
Query: 481 VRFANMPPYVLNAFVESFSKIKQKILWKTDVEVEVPPNVLVRNWFPQADILGHKNCRLFL 540
R N +E K K +W + E + N +A + +
Sbjct: 283 YRSTKRILQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIREAVE 342
Query: 541 THG 543
Sbjct: 343 RGE 345
>d1bwva2 d.58.9.1 (A:7-149) Ribulose 1,5-bisphosphate
carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Length = 144
Score = 27.8 bits (62), Expect = 2.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 328 KYKAPVINFQPLGYWPSNY 346
+Y++ VI + +GYW +Y
Sbjct: 6 RYESGVIPYAKMGYWNPDY 24
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 27.7 bits (61), Expect = 6.0
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Query: 434 GVPQALTPNMLFTGGM----HIKHAKPLPEDLEKYMSDAPHGVIFFSFGTNVRFANMPP 488
G + PN T G ++ +P K +D I++S +R N+P
Sbjct: 309 GAIKMSGPNNHVTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPK 367
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide
phosphodiesterase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 256
Score = 27.1 bits (58), Expect = 6.3
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 522 RNWFPQADILGHKNCRLFLTHGGIHSAMEAGYHGVPVVMMPGFSDQFQ 569
R+ +L + R + G +H + A + G+PV +
Sbjct: 177 RDQAALGRVLRGTDVRA-ILAGHLHYSTNATFVGIPVSVASATCYTQD 223
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum
bicolor [TaxId: 4558]}
Length = 484
Score = 27.1 bits (59), Expect = 8.6
Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 7/153 (4%)
Query: 242 SDADKFDNNAFFLTVNEETASEIRANFRNRTHADLIGLFHSLCLAQMEQVLRTPEIQTFV 301
S D F +N V+ ++ A+ + D + L + + R +
Sbjct: 40 STWDHFCHNFPEWIVDRSNG-DVAADSYHMYAED-VRLLKEMGM----DAYRFSISWPRI 93
Query: 302 QRDDSHFDLVIIEGTFCGECLLAMGHKYK-APVINFQPLGYWPSNYYVYGNLLSPAVIPD 360
+ + + L+ + + P I + YG L +I D
Sbjct: 94 LPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKD 153
Query: 361 FRLPSTTQMNFWGRLDSLWFAVTDLFLTNLFYY 393
+ + +G+ W + Y
Sbjct: 154 YTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSY 186
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.425
Gapped
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,712,996
Number of extensions: 132792
Number of successful extensions: 383
Number of sequences better than 10.0: 1
Number of HSP's gapped: 373
Number of HSP's successfully gapped: 38
Length of query: 703
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 611
Effective length of database: 1,144,436
Effective search space: 699250396
Effective search space used: 699250396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.1 bits)