RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16994
(932 letters)
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a
[TaxId: 10090]}
Length = 349
Score = 121 bits (304), Expect = 2e-30
Identities = 68/303 (22%), Positives = 112/303 (36%), Gaps = 46/303 (15%)
Query: 64 SFDQSYAGSTFENVLEVLDQKSIMFKPMKDMKCSITDTCNLYRFS----------NIYGP 113
SFD SY T + QK + ++M + N+ F+ + G
Sbjct: 48 SFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGK 107
Query: 114 HTTQAE------LFQNIVHNMLERYLNGEDALLFSFGTTNSGK----------------- 150
+ N ++ S+ +
Sbjct: 108 QEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVRE 167
Query: 151 ----TFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVD- 205
++DL+ + V S + ++ G +VA T +N SSRSH VF+I +
Sbjct: 168 HPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRH 227
Query: 206 --PGSEELIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRE--- 260
+ +S + DLAG+ER G RL+E IN SL L + + L E
Sbjct: 228 DAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDS 287
Query: 261 --NNGLKADKKKLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISS 318
N K K IP+RDS LT + + +L G S T M+ ++ + +ET+ L+ +
Sbjct: 288 GPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTA-MVAALSPADINYDETLSTLRYAD 346
Query: 319 VAR 321
A+
Sbjct: 347 RAK 349
Score = 35.3 bits (80), Expect = 0.030
Identities = 17/89 (19%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 75 ENVLEVLDQKSIMFKPMKDMKCSITDTCNLYRFSNIYGPHT--------TQAELFQNIVH 126
+ ++++ + + P + +T + F Y HT +Q +++++I
Sbjct: 22 KCIIQMSGSTTTIVNPKQP-----KETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGE 76
Query: 127 NMLERYLNGEDALLFSFGTTNSGKTFTIQ 155
ML+ G + +F++G T +GK++T+
Sbjct: 77 EMLQHAFEGYNVCIFAYGQTGAGKSYTMM 105
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId:
4932]}
Length = 342
Score = 114 bits (286), Expect = 3e-28
Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 148 SGKTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPG 207
KT TI ++T + S E +L+ S A T N SS SH +F I L +
Sbjct: 170 ETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAK 229
Query: 208 SEELIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGLKAD 267
+ + ++ DLAG+ER + GDRLRE + IN SL L + L + +
Sbjct: 230 TGA-HSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDS---- 284
Query: 268 KKKLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVAR 321
K+ IPFR+SKLT + Q SL+G S T+ M VN++ S ++ ET+ L+ +S
Sbjct: 285 TKRHIPFRNSKLTYLLQYSLTGDSKTL-MFVNISPSSSHINETLNSLRFASKVN 337
Score = 30.7 bits (68), Expect = 0.77
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 105 YRFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGKTF 152
++F I+ T ++F+ V +++ L+G + +F++G T SGKTF
Sbjct: 52 FKFDKIFDQQDTNVDVFKE-VGQLVQSSLDGYNVCIFAYGQTGSGKTF 98
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 112 bits (280), Expect = 1e-27
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 152 FTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSEEL 211
++ T V S +E + GKS+ VA T +N SSRSH +F I + + + +E+
Sbjct: 161 PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQ- 219
Query: 212 IMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGLKADKKKL 271
+ + DLAG+E+ + G L EA+ IN SL L + L A+
Sbjct: 220 KLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISAL-------AEGSTY 272
Query: 272 IPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVAR 321
+P+RDSK+T+I Q SL G T +++ + S ET L A+
Sbjct: 273 VPYRDSKMTRILQDSLGGNCRTT-IVICCSPSSYNESETKSTLLFGQRAK 321
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic
kinesin eg5 [TaxId: 9606]}
Length = 345
Score = 108 bits (271), Expect = 3e-26
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 147 NSGKTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVK--V 204
+ + I+ L + VH+ +E Y++L G + + A T +N SSRSH VFS+ +
Sbjct: 172 RNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKET 231
Query: 205 DPGSEELIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGL 264
EEL+ + ++ DLAG+E R+ R REA IN SL L R L
Sbjct: 232 TIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITAL------ 285
Query: 265 KADKKKLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVARDLL 324
++ +P+R+SKLT+I Q SL G + T +I ++ + EET+ L+ + A+++L
Sbjct: 286 -VERTPHVPYRESKLTRILQDSLGGRTRTS-IIATISPASLNLEETLSTLEYAHRAKNIL 343
Query: 325 T 325
Sbjct: 344 N 344
Score = 44.2 bits (103), Expect = 5e-05
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 105 YRFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGKTFTIQ 155
Y F ++G T Q ++++++V +L+ + G + +F++G T +GKTFT++
Sbjct: 49 YTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTME 99
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 330
Score = 105 bits (261), Expect = 5e-25
Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 17/281 (6%)
Query: 47 SKEDRVQAFDVKKQILNSFDQSYAGSTFENVLEVLDQKSIMFKPMKDMKCSITDTCNLYR 106
V +K I++ ++ S F + M +
Sbjct: 62 VDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAA 121
Query: 107 FSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFS----FGTTNSGKTFTIQDLTYVNV 162
+ + + I + E Y LL N K ++DL + V
Sbjct: 122 GDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRKMVAALENGKKEVVVKDLKILRV 181
Query: 163 HSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSEELIMMSSFDICDL 222
+ EE + G + N SSRSH + +I L ++ + + DL
Sbjct: 182 LTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN----KNTSLGKIAFIDL 237
Query: 223 AGAERQKRAHTSGD-RLREARTINSSLHVLARCFNVLRENNGLKADKKKLIPFRDSKLTQ 281
AG+ER + + IN SL L C + K IPFRDS+LT+
Sbjct: 238 AGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDS-------DKNHIPFRDSELTK 290
Query: 282 IFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVARD 322
+ + G S ++ MI N++ + + E+T+ L+ SS ++
Sbjct: 291 VLRDIFVGKSKSI-MIANISPTISCCEQTLNTLRYSSRVKN 330
Score = 42.7 bits (99), Expect = 1e-04
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 75 ENVLEVLDQKSIMFKPMK---DMKCSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLER 131
+++ V + ++ + DM I + ++ +++N + ++
Sbjct: 21 SDIITVKNNCTLYIDEPRYKVDMTKYIERHE--FIVDKVFDDTVDNFTVYENTIKPLIID 78
Query: 132 -YLNGEDALLFSFGTTNSGKTFTIQDL 157
Y NG F++G T SGKT+T+
Sbjct: 79 LYENGCVCSCFAYGQTGSGKTYTMLGS 105
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId:
10090]}
Length = 362
Score = 105 bits (262), Expect = 6e-25
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 150 KTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSE 209
+ + L V ++ +++ G + + T N SSRSH F I L
Sbjct: 200 QQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG---- 255
Query: 210 ELIMMSSFDICDLAGAERQKRAHTSGDRLR-EARTINSSLHVLARCFNVLRENNGLKADK 268
+ F + DLAG ER ++ + R E IN SL L C L
Sbjct: 256 --RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRAL-------GQN 306
Query: 269 KKLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVAR 321
K PFR+SKLTQ+ + S G +S MI ++ + E T+ L+ + +
Sbjct: 307 KAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVK 359
Score = 43.0 bits (100), Expect = 1e-04
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 75 ENVLEVLDQKSIMFKPMKDMKCSITDTCN--LYRFSNIYGPHTTQAELFQNIVHNMLERY 132
+V+ V + ++ +K +T + F + + +++ +++
Sbjct: 51 IDVISVPSKCLLLVHE-PKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTI 109
Query: 133 LNGEDALLFSFGTTNSGKTFTIQ 155
G A F++G T SGKT T+
Sbjct: 110 FEGGKATCFAYGQTGSGKTHTMG 132
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Length = 354
Score = 100 bits (250), Expect = 2e-23
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 150 KTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSE 209
+ ++ L + V S +E Y V+R G + +VA T +N SSRSH +F I + + + +
Sbjct: 164 RGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETG 223
Query: 210 ELIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGLKADKK 269
+ DLAG+E+ + SG L EA+ IN SL L N L + K
Sbjct: 224 S-AKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDG------KS 276
Query: 270 KLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVARDLLTVAK 328
+P+RDSKLT+I Q SL G S T +I+N + S ET+ L+ A+ + AK
Sbjct: 277 SHVPYRDSKLTRILQESLGGNSRTT-LIINCSPSSYNDAETLSTLRFGMRAKSIKNKAK 334
Score = 49.2 bits (116), Expect = 1e-06
Identities = 14/121 (11%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 75 ENVLEVLDQKSIMFKPMKDMKCSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLERYLN 134
+ ++ + + + F ++ Q+++F + ++ LN
Sbjct: 26 QPIVTFQGPDTCTVDSKEAQGS--------FTFDRVFDMSCKQSDIFDFSIKPTVDDILN 77
Query: 135 GEDALLFSFGTTNSGKTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSH 194
G + +F++G T +GK++T+ + + R++ + + + + + S+
Sbjct: 78 GYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSY 137
Query: 195 C 195
Sbjct: 138 M 138
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 93.4 bits (231), Expect = 7e-21
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 91 MKDMKCSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGK 150
+ + ++ + R G F I + +L L+ E + N+
Sbjct: 149 VGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKN 208
Query: 151 TFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSEE 210
+ ++T V ++ K + + A T N RSSRSH V ++L+ +E
Sbjct: 209 DIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQE 268
Query: 211 LIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGLKADKKK 270
I + S ++ DLAG+E K + R+ E + IN SL L L K+
Sbjct: 269 -ISVGSINLVDLAGSESPKTST----RMTETKNINRSLSELTNVILAL-------LQKQD 316
Query: 271 LIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVAR 321
IP+R+SKLT + SL G S T+ M +NV+ +E+V+ L+ ++
Sbjct: 317 HIPYRNSKLTHLLMPSLGGNSKTL-MFINVSPFQDCFQESVKSLRFAASVN 366
Score = 31.8 bits (71), Expect = 0.34
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 489 LKQELSELEAKYKSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKV 535
L+Q EL + + E E +L + E ++L +L G +
Sbjct: 1 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNI 47
Score = 31.4 bits (70), Expect = 0.46
Identities = 17/79 (21%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 77 VLEVLDQKSIMFKPMKDMKCSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLERYLNGE 136
D+ ++ + + S ++ F ++ P ++Q+++F+ +V +++ L+G
Sbjct: 67 TWTYHDESTVELQSIDAQAKSKMGQQ-IFSFDQVFHPLSSQSDIFE-MVSPLIQSALDGY 124
Query: 137 DALLFSFGTTNSGKTFTIQ 155
+ +F++G T SGKT+T+
Sbjct: 125 NICIFAYGQTGSGKTYTMD 143
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato
(Solanum tuberosum) [TaxId: 4113]}
Length = 364
Score = 88.9 bits (219), Expect = 2e-19
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 150 KTFTIQDLTYVNVHSCEEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVDPGSE 209
+++++T V++ + EE +++ G T +N +SSRSH + S+ + + ++
Sbjct: 158 GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQ 217
Query: 210 ELIMMSSFDICDLAGAERQKRAHTSGDRLREARTINSSLHVLARCFNVLRENNGLKADKK 269
+ DLAG+ER K++ ++G++L+EA++IN SL L + L +
Sbjct: 218 AIARGK-LSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISAL-------SSGN 269
Query: 270 KLIPFRDSKLTQIFQRSLSGLSSTVKMIVNVNASPAYAEETVQVLKISSVARDLLTVAK 328
+ IP+R+ KLT + SL G + T+ M VN++ + + +ET L +S R ++
Sbjct: 270 QHIPYRNHKLTMLMSDSLGGNAKTL-MFVNISPAESNLDETHNSLTYASRVRSIVNDPS 327
Score = 36.9 bits (84), Expect = 0.009
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 75 ENVLEVLDQKSIMFKPMKDMKCSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLERYLN 134
N + +D+ ++ D + + ++ + TQ ++F++ + +++ ++
Sbjct: 21 RNAIRSVDEFTVEHLWKDDKAKQ-------HMYDRVFDGNATQDDVFEDTKY-LVQSAVD 72
Query: 135 GEDALLFSFGTTNSGKTFTIQ 155
G + +F++G T SGKTFTI
Sbjct: 73 GYNVCIFAYGQTGSGKTFTIY 93
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 37.7 bits (87), Expect = 0.004
Identities = 15/165 (9%), Positives = 51/165 (30%), Gaps = 3/165 (1%)
Query: 433 LREQHEEDLERQRKFYKTQIETL-MTLVKNQQAEDDSEDETLNESAIEAQHKLKIQNLKQ 491
++ ++ + E + Q+ + + + + Q ++ L
Sbjct: 106 MQLALDQRAALADRTLGEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKAARLAALDA 165
Query: 492 ELSELEAKYKSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKVAQ--LSRRVEEMERGA 549
+L+ E ++ +D K+ +L + ++ + +R + +
Sbjct: 166 QLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDE 225
Query: 550 QTENKPEEVKYLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEERR 594
+ + + + + +++ I QLR + E
Sbjct: 226 AWQTRYQAYAAERDRIAAQGLAPQDRDARIAQLRQQTFTAPGEAI 270
Score = 30.0 bits (67), Expect = 1.2
Identities = 16/141 (11%), Positives = 44/141 (31%)
Query: 536 AQLSRRVEEMERGAQTENKPEEVKYLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEERRL 595
L R + E K + L + L + + + +++ L +
Sbjct: 138 HDLERIRIANDTTLSPEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGAT 197
Query: 596 LTVRSAELEYELEQRDYLIAVKTDGAEELQEKLDYMENKFQEESLVYERLMSEKENLISQ 655
A++ L A + +E + ++ +++ I+Q
Sbjct: 198 PDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRIAAQGLAPQDRDARIAQ 257
Query: 656 LKADLESNRAESNQSAHDEQA 676
L+ + E+ ++A ++
Sbjct: 258 LRQQTFTAPGEAIRAASLDRG 278
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Length = 493
Score = 34.6 bits (79), Expect = 0.061
Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 10/209 (4%)
Query: 427 ENNVKKLREQHEEDLERQRKFYKTQIETLMTLVKNQQAEDDSEDETLNESAIEAQHKLKI 486
E + E +L Q + + ++ L Q + +D + + + + ++
Sbjct: 277 EVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKD--IIAAFVRHRREVVT 334
Query: 487 QNLKQELSELEAKYKSLSEEHE--DMSGKLKELTRENRDLVTKNKELEGKVAQLSRRVEE 544
+ EL + + L + EL R L QL
Sbjct: 335 RRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAM 394
Query: 545 MERGAQTENKPEEVKYLKSLLDEAKEEFKEQTTEIEQLR------SEVEKLSEERRLLTV 598
+ER +PE ++ + D ++Q I LR E EKL +E + L
Sbjct: 395 LERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLD 454
Query: 599 RSAELEYELEQRDYLIAVKTDGAEELQEK 627
+ AEL L D L+ V + E ++E+
Sbjct: 455 QIAELLRILGSADRLMEVIREELELVREQ 483
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 32.8 bits (74), Expect = 0.19
Identities = 26/194 (13%), Positives = 68/194 (35%), Gaps = 10/194 (5%)
Query: 397 KKEFEYQIREEYREVQEDFRKMFEEQQTDWENNVKKLREQHEEDLERQRKFYKTQIETLM 456
K+ + + + + EE+ + + L+ +K Y +
Sbjct: 113 CKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPR--- 169
Query: 457 TLVKNQQAEDDSEDETLNESAIEAQHKLKIQNLKQELSELEAKYKSLSEEHEDMSGKLKE 516
K QAE+ + ++ ++ Q L ++ E+E + +
Sbjct: 170 ---KGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEM 226
Query: 517 LTRENRDLVTKNKELEGKVAQLSRRVEEMERGAQTENKPEEVKYLKSLLDEAKEEFKEQT 576
+ + + K + + + QL+ ++E E + L+ KE F++++
Sbjct: 227 QRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKES 286
Query: 577 ----TEIEQLRSEV 586
EI+ L++++
Sbjct: 287 RIMKNEIQDLQTKM 300
Score = 32.0 bits (72), Expect = 0.31
Identities = 22/233 (9%), Positives = 77/233 (33%), Gaps = 3/233 (1%)
Query: 403 QIREEYREVQEDFRKMFEEQQTDWENNVKKLREQHEEDLERQRKFYKTQIETLMTLVKNQ 462
++ + +R+ + + ++F + +++ LE++R + Q + + +
Sbjct: 69 ELLDLHRDSEREAIEVFIRSSFK--DVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSG 126
Query: 463 QAEDDSEDETLNESAIEAQHKLKIQNLKQELSELEAKYKSLSEEHEDMSGKLKELTRENR 522
+ A + Q+L +L+ KY + L+ +
Sbjct: 127 LLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKE 186
Query: 523 DLVTKNKELEGKVAQLSRRV-EEMERGAQTENKPEEVKYLKSLLDEAKEEFKEQTTEIEQ 581
+ + + + + + + E + + + + ++ ++ E+ + E +
Sbjct: 187 SMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLK 246
Query: 582 LRSEVEKLSEERRLLTVRSAELEYELEQRDYLIAVKTDGAEELQEKLDYMENK 634
+E + + L EQ L + ++ ++ ++ K
Sbjct: 247 QLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 31.6 bits (71), Expect = 0.34
Identities = 34/268 (12%), Positives = 78/268 (29%), Gaps = 18/268 (6%)
Query: 417 KMFEEQQTDWENNVKKLREQHEEDLERQRKFYKTQIETLMTLVKNQQAEDDSEDETLNES 476
K + V+ E +E L+ R + IE + + + D + L
Sbjct: 47 KAIAHYEQQMGQKVQLPTESLQELLDLHRDSEREAIEVFIR--SSFKDVDHLFQKELAAQ 104
Query: 477 AIEAQHKLKIQNLKQELSELEAKYKSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKVA 536
+ + QN + + + E+ L + +
Sbjct: 105 LEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQ------ 158
Query: 537 QLSRRVEEMERGAQTENKPEEVKYLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEERRLL 596
++ + + EE+ E+ + QT + + + ++ ER
Sbjct: 159 ---DLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEK--EIEVERVKA 213
Query: 597 TVRSAELEYELEQRDYLIAVKTDGAEELQEKLDYMENKFQEESLVYERLMSEKENLISQL 656
A + E + + QE L + K + +R+ KE +
Sbjct: 214 ESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMEN-----DRVQLLKEQERTLA 268
Query: 657 KADLESNRAESNQSAHDEQALQKEIKNL 684
E + + + ++ EI++L
Sbjct: 269 LKLQEQEQLLKEGFQKESRIMKNEIQDL 296
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 30.4 bits (69), Expect = 0.25
Identities = 7/36 (19%), Positives = 19/36 (52%)
Query: 485 KIQNLKQELSELEAKYKSLSEEHEDMSGKLKELTRE 520
+++ L Q+L +L+ + L + +L+ L+ +
Sbjct: 2 RLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 37
>d1rmga_ b.80.1.3 (A:) Rhamnogalacturonase A {Aspergillus aculeatus
[TaxId: 5053]}
Length = 422
Score = 32.3 bits (73), Expect = 0.27
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 10/72 (13%)
Query: 96 CSITDTCNLYRFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSF----GTTNSGKT 151
+ +Y + G T L +N + + +L T +G
Sbjct: 241 VYTWSSNQMYMIKSNGGSGTVSNVLLENFIGH------GNAYSLDIDGYWSSMTAVAGDG 294
Query: 152 FTIQDLTYVNVH 163
+ ++T N
Sbjct: 295 VQLNNITVKNWK 306
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 32.1 bits (72), Expect = 0.28
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 106 RFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGKTFTIQDLTYVNVHSC 165
R N YGP+ + + ++ + L+G L+ G +++ + + H C
Sbjct: 177 RCCNNYGPY----QHPEKLIPLFVTNLLDGGTLPLYGDGA-------NVREWVHTDDH-C 224
Query: 166 EEAYRVLRFGKSHLSVAPTELNHRSSRSHCVFSIKLVKVD 205
VL G++ ++R + + D
Sbjct: 225 RGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD 264
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 217
Score = 31.2 bits (70), Expect = 0.44
Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 14/205 (6%)
Query: 626 EKLDYMENKFQEESLVYERLMSEKENLISQLKADLESNRAES-------NQSAHDEQALQ 678
E D N F + RL E N I ++A +++ ALQ
Sbjct: 12 EIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGYDALQ 71
Query: 679 KEIKNLGSLLVDKDKTIGDLKAK-IHKYEKYYAVMKEDRKTKEKDIAELKTKCEELTQQV 737
+ SL D +GD ++ Y + MK+ + + + + + +
Sbjct: 72 AQTGASESLWADFAHKLGDQVLIPLNTYTGQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQ 131
Query: 738 TKLEADCQSYLNTIKNMENDERSTKHNQEKLLKIYEDRLKAVQDELAEMKCAQLKPSLEA 797
A+ + + + E L D L A+ + + L +L+
Sbjct: 132 AN--ANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALY----DSRILFLVTNLQT 185
Query: 798 SAATPSQYRKQLEDQVNSLKAELEQ 822
AT + + + L+A +++
Sbjct: 186 LFATEQVFHNETAKIYSELEAIVDK 210
Score = 27.0 bits (59), Expect = 8.4
Identities = 15/148 (10%), Positives = 49/148 (33%), Gaps = 4/148 (2%)
Query: 717 KTKEKDIAELKTKCEELTQQVTKLEADCQSYLNTIKNMENDERSTKHNQEKLLKIYEDRL 776
+T ++ + +L+ + +Y+ ++ + ++ + ++ +
Sbjct: 8 RTADEIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGY 67
Query: 777 KAVQDELAEMK--CAQLKPSLEASAATP-SQYRKQLEDQVNSLKAELEQRHNVVRDL-QL 832
A+Q + + A L P + Y Q + ++ + +
Sbjct: 68 DALQAQTGASESLWADFAHKLGDQVLIPLNTYTGQFPEMKKKVEKRNRKLIDYDGQRHSF 127
Query: 833 KLLQKGEMINNLKAQMEKSQQQQQQQRS 860
+ LQ ++ K ++Q ++ R
Sbjct: 128 QNLQANANKRKDDVKLTKGREQLEEARR 155
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding
protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 529
Score = 31.1 bits (70), Expect = 0.67
Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 555 PEEVKYLKSL-LDEAKEEFKEQTTEIEQLRSEVEKLSEERRLLTVRSAELEYELEQRDYL 613
PE ++ +S LD +++ T I + + + E + + ++++
Sbjct: 185 PELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSET------NGRIPKTYKEKEDF 238
Query: 614 IAVKTDGAEELQEKLDYMENKFQEESLVYERLMSEKENLISQLKADLESNRAESNQSAHD 673
+ G + + E F EE++ + S ++ +R +
Sbjct: 239 RDLIRQGILKNENGAPEDEENF-EEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTP 297
Query: 674 E-----QALQKEIKNLGSLLVDKDKTIGDLKAKIHKYEKYYAVMKEDRKTKEKDIAELKT 728
+AL++ + G + TI D+ A KY + R+ +KD A +
Sbjct: 298 SFWILARALKEFVAKEGQGNLPVRGTIPDMIAD---SGKYIKLQNVYREKAKKDAAAVGN 354
Query: 729 KCEELTQQVTK 739
+L Q + +
Sbjct: 355 HVAKLLQSIGQ 365
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 30.0 bits (67), Expect = 1.3
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 9/55 (16%)
Query: 106 RFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGKTFTIQDLTYV 160
R N +GP +V N + + L GE ++ G+ + YV
Sbjct: 170 RIFNTFGPR--MHMNDGRVVSNFILQALQGEPLTVYGSGS-------QTRAFQYV 215
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB
{Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 29.7 bits (66), Expect = 1.7
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 7/102 (6%)
Query: 356 DIVFQERASGEMTDYFQGSHDDPYETIRLLEARLAEFEGFDKKEFEYQIREEYREVQEDF 415
+ E D G E + + A + I +E E +
Sbjct: 214 EFFGDEIERIREVDALTGEVLGEREHVAIFPASHFVTREEKMRLAIQNIEQELEERLAEL 273
Query: 416 RKMFEEQQTDWENNVKKLREQHEEDLERQRKF-YKTQIETLM 456
R + + +L ++ DLE R+ + + IE
Sbjct: 274 RAQGKLLEAQ------RLEQRTRYDLEMMREMGFCSGIENYS 309
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 28.0 bits (62), Expect = 1.9
Identities = 7/45 (15%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 667 SNQSAHDEQALQKEIKNLG---SLLVDKDKTIGDLKAKIHKYEKY 708
S + + + ++ +K V ++ ++ K I K K
Sbjct: 23 SAAAPAEPKIIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKS 67
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 29.3 bits (65), Expect = 2.0
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 11/58 (18%)
Query: 106 RFSNIYGPHTTQAELFQNIVHNMLERYLNGEDALLFSFGTTNSGKTFTIQDLTYVNVH 163
SN YGP+ + ++ ++ L G+ ++ G I+D YV H
Sbjct: 193 NCSNNYGPY----HFPEKLIPLVILNALEGKPLPIYGKGD-------QIRDWLYVEDH 239
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and
2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 271
Score = 28.9 bits (64), Expect = 2.4
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 355 SDIVFQERASG-----EMTDYFQGSHDDPYETIRLLEARLAEFEGFDKKEFEYQIREEYR 409
D + ER +M + GS +E + +A F+K R+E
Sbjct: 3 IDHLADERNKAEFDVEDMKIVWAGSRHA-FEVSDRIARLVASDPVFEKSNRARLSRKELF 61
Query: 410 EVQ-----EDFRKMFEEQQTDW 426
+ F+++ E + +
Sbjct: 62 KSTLRKCAHAFKRIIELRLNEE 83
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923
{Corynebacterium glutamicum [TaxId: 1718]}
Length = 269
Score = 28.9 bits (64), Expect = 2.4
Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 365 GEMTDYFQGSHDDPYETIRLLEARLAEFEGFDKKEFEYQIREEYREVQEDFRKMFEEQQT 424
+ Y + P T++LL++ +A+ + + + +V + EE
Sbjct: 194 VHVPHYV-SASPYPAATLKLLQS-IADSADLNLPLLA--LERDAEKVHRQLMEQTEESS- 248
Query: 425 DWENNVKKLREQHEEDLERQR 445
+ + V L +Q++ +LER R
Sbjct: 249 EIQRVVGALEQQYDSELERYR 269
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo
sapiens) [TaxId: 9606]}
Length = 200
Score = 28.6 bits (63), Expect = 2.7
Identities = 6/152 (3%), Positives = 39/152 (25%), Gaps = 9/152 (5%)
Query: 717 KTKEKDIAELKTKCEELTQQVTKLEADCQSYLNTIKNMENDERSTKHNQEKLLKIYEDRL 776
+T + ++ E ++ + ++ + ++ + + + +
Sbjct: 2 RTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQ---TQHALGDAFADLSQK-- 56
Query: 777 KAVQDELAEMKCAQLKPSLEASAATPSQYRKQLEDQVNSLKAELEQRHNVVRDLQLKLLQ 836
+ + + + + V+S+ + + +
Sbjct: 57 ----SPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEA 112
Query: 837 KGEMINNLKAQMEKSQQQQQQQRSPLKGLENQ 868
+ + +E+ + + + Q
Sbjct: 113 ARLEYDAYRTDLEELSLGPRDAGTRGRLESAQ 144
>d2ddha3 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, domains
1 and 2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 267
Score = 29.0 bits (64), Expect = 2.7
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 360 QERASG-----EMTDYFQGSHDDPYETIRLLEARLAEFEGFDKKEFEYQIREEYREVQED 414
+ERAS +T GS ++ R +E + F +++ + R + E
Sbjct: 7 KERASATFNPELITHILDGSPEN-TRRRREIENLILNDPDFQHEDYNFLTRSQRYE--VA 63
Query: 415 FRKMFEEQQTDWENNVKKLREQHEEDLER 443
+K VKK+RE D E
Sbjct: 64 VKKSAT--------MVKKMREYGISDPEE 84
>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 186
Score = 28.3 bits (63), Expect = 3.1
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 729 KCEELTQQVTKLEADCQSYLNTIKNMEN--DERSTKHNQEKLLKIYEDRLKAVQDELAEM 786
K + L Q + + Q +K +EN D+ + K + L +
Sbjct: 5 KQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLK-SQGDMQDLNGNNQSVTRQ 63
Query: 787 KCAQLKPSLEASAATPSQYRKQLEDQVNSLKAELEQRHNVVRDLQLKLLQKG-------- 838
K QL+ L A Q R+ + ++ L + +E + D +L ++
Sbjct: 64 KMQQLEQMLTALD----QMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 119
Query: 839 ---EMINNLKAQMEKSQQQQQQQRSPLKGLENQMAKINIDRSPSGEDTD 884
++ L+ + + Q Q R +K LE K++ P +
Sbjct: 120 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRP 168
Score = 27.9 bits (62), Expect = 4.1
Identities = 22/159 (13%), Positives = 61/159 (38%), Gaps = 21/159 (13%)
Query: 458 LVKNQQAEDDSEDETLNESAIEAQHKLKIQNLKQELSELEAKYKSL--SEEHEDMSGKLK 515
+V +Q + + + + + + K+K ++ + + YK+L + +D++G +
Sbjct: 1 VVTEKQQMLEQHLQDVRKRVQDLEQKMK--VVENLQDDFDFNYKTLKSQGDMQDLNGNNQ 58
Query: 516 ELTRENR---------------DLVTKNKELEGKVAQLSRRV--EEMERGAQTENKPEEV 558
+TR+ +V++ L + + + + EE+ + +
Sbjct: 59 SVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIG 118
Query: 559 KYLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEERRLLT 597
LD + Q R +++KL E ++ ++
Sbjct: 119 GPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVS 157
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 107
Score = 27.1 bits (60), Expect = 3.9
Identities = 12/103 (11%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 491 QELSELEAKYKSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKVAQLSRRVEEMERGAQ 550
Q + A+++ L ++ + +S + + + + + +EL V +
Sbjct: 1 QNVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAAD--DAEVYKSSGNIL 58
Query: 551 TENKPEEVK-YLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEE 592
+E+ L+ L+ + K + E++ +++++
Sbjct: 59 IRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVN 101
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 28.4 bits (62), Expect = 4.3
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 419 FEEQQTDWENNVKKLREQHEE---DLERQRKFYKTQIETLMTLVKNQQAEDDSEDETLNE 475
F ++ T E NVKK+ E EE L+ +K + L + ++ E ++ ++
Sbjct: 3 FSQELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQ 62
Query: 476 SAIEAQHKLKIQNLKQELSELEAKYKSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKV 535
K+QN E + ++ + +L L ++ D + L
Sbjct: 63 ---------KVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSK 113
Query: 536 AQLSRRVEEMER 547
LS + R
Sbjct: 114 PMLSEEDTNILR 125
>d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain
(RecB), N-terminal domain {Escherichia coli [TaxId:
562]}
Length = 395
Score = 28.4 bits (62), Expect = 4.8
Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 396 DKKEFEYQIREEYREVQEDFRKMFEEQQTDWENNVKKLREQHEEDLERQRKFYKTQIETL 455
+ + + + + W+ V++ + +R + +
Sbjct: 123 RENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSA 182
Query: 456 MTLVKNQQAEDDSEDETLNESAIEAQHKLKIQNLKQELSELEAKYKSLSEEHEDMSGKLK 515
+ +N A E + I + L+ L E + + +
Sbjct: 183 RNIAENLLATAGGERRLTDILHISELLQEAGTQLE-SEHALVRWLSQHILEPDSNASSQQ 241
Query: 516 ELTRENRDLVT-----KNKELEGKVAQLSRRVEEMERGAQTENKPEEVKYLKSLLDEAKE 570
++ LV K+K LE + L E+ Y EA
Sbjct: 242 MRLESDKHLVQIVTIHKSKGLEYPLVWLP--------FITNFRVQEQAFYHDRHSFEAVL 293
Query: 571 EFKEQTTEIEQLRSEVEKLSEERRLLTV 598
+ ++ +E E+L+E+ RLL V
Sbjct: 294 DLNAAPESVDL--AEAERLAEDLRLLYV 319
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 26.4 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 563 SLLDEAKEEFKEQTTEIEQLRSEVEKLSEERRLLTVRSAELE 604
+L +A E ++L SE + L + R L + +L
Sbjct: 45 VILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86
Score = 26.0 bits (57), Expect = 7.6
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 434 REQHEEDLERQRKFYKTQIETLMTLVKNQQAEDDSEDETLNESAIEAQHKLKIQNLKQEL 493
R H ++R K L + + + + + + A I +++ E
Sbjct: 7 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATA-----YILSVQAEE 61
Query: 494 SELEAKYKSLSEEHEDMSGKLKEL 517
+L ++ L + E + KL++L
Sbjct: 62 QKLISEEDLLRKRREQLKHKLEQL 85
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 133
Score = 26.8 bits (59), Expect = 7.5
Identities = 19/115 (16%), Positives = 46/115 (40%), Gaps = 4/115 (3%)
Query: 435 EQHEEDLERQRKFYKTQIETLMTLVKN-QQAEDDSEDETLNESAIEAQHKLKIQNLKQEL 493
+ E +++Q + + I L L K + ETL + K ++++ + +
Sbjct: 14 QSQVELIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGAGSFIKAELKDTSEVI 73
Query: 494 SELEAKY---KSLSEEHEDMSGKLKELTRENRDLVTKNKELEGKVAQLSRRVEEM 545
+ A K+ + E + + EL + + + + + +LS + EE+
Sbjct: 74 MSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128
>d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger
domain-containing protein 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 25.6 bits (56), Expect = 7.6
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 689 VDKDKTIGDLKAKIHKYEKYYA 710
V + TI +L+ ++
Sbjct: 19 VSRKATIEELRERVWALFDVRP 40
>d1qwza_ b.100.1.1 (A:) Sortase B {Staphylococcus aureus [TaxId:
1280]}
Length = 235
Score = 27.2 bits (60), Expect = 8.8
Identities = 7/39 (17%), Positives = 19/39 (48%)
Query: 401 EYQIREEYREVQEDFRKMFEEQQTDWENNVKKLREQHEE 439
+ Q R Y ++Q+ F+ + + Q + L + +++
Sbjct: 23 DKQERANYEKLQQKFQMLMSKHQAHVRPQFESLEKINKD 61
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS)
{Thermus thermophilus [TaxId: 274]}
Length = 370
Score = 27.2 bits (59), Expect = 9.3
Identities = 7/47 (14%), Positives = 17/47 (36%)
Query: 557 EVKYLKSLLDEAKEEFKEQTTEIEQLRSEVEKLSEERRLLTVRSAEL 603
+ +L+EA + E + E+ + L +R + +
Sbjct: 305 LAVSVDEVLEEATRRARAIVEEKNPDHPDKEEAARMVALGAIRFSMV 351
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.128 0.345
Gapped
Lambda K H
0.267 0.0675 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,159,365
Number of extensions: 150224
Number of successful extensions: 794
Number of sequences better than 10.0: 1
Number of HSP's gapped: 743
Number of HSP's successfully gapped: 159
Length of query: 932
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 838
Effective length of database: 1,116,976
Effective search space: 936025888
Effective search space used: 936025888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (25.8 bits)