Query psy16996
Match_columns 268
No_of_seqs 152 out of 210
Neff 3.8
Searched_HMMs 13730
Date Fri Aug 16 19:06:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16996.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16996hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ve8a1 a.4.5.67 (A:745-811) D 67.6 2.8 0.0002 29.3 4.0 30 129-159 26-55 (67)
2 d2j5pa1 a.4.5.67 (A:1261-1329) 38.4 13 0.00098 25.8 3.5 30 129-159 29-58 (69)
3 d1hx1b_ a.7.7.1 (B:) BAG-famil 28.1 79 0.0058 23.6 6.7 58 92-156 13-80 (112)
4 d2bnma1 a.35.1.3 (A:6-76) Hydr 21.2 37 0.0027 23.3 3.2 52 102-156 6-69 (71)
5 d2bskb1 g.83.1.1 (B:13-77) Mit 14.9 1.6E+02 0.011 19.3 7.5 38 34-80 13-50 (65)
6 d2bska1 g.83.1.1 (A:13-85) Mit 14.5 1.7E+02 0.013 19.6 6.3 36 33-78 11-46 (73)
7 d2nmla1 d.330.1.1 (A:2-101) En 13.6 22 0.0016 26.4 0.4 15 138-152 21-35 (100)
8 d1otfa_ d.80.1.1 (A:) 4-oxaloc 12.4 72 0.0052 20.0 2.8 19 133-151 15-33 (59)
9 d1t7sa_ a.7.7.1 (A:) BAG-famil 12.3 2.8E+02 0.02 20.9 7.0 22 136-157 69-90 (129)
10 d1fxkc_ a.2.5.1 (C:) Prefoldin 12.2 1.4E+02 0.0099 21.1 4.7 15 191-205 82-96 (133)
No 1
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=67.56 E-value=2.8 Score=29.28 Aligned_cols=30 Identities=10% Similarity=0.217 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhhhHHHHHhhhcccCCCCCCC
Q psy16996 129 LRTTLVAFWNSGITDELETVCGLLSPPRSPR 159 (268)
Q Consensus 129 ~r~~~~~~~~~~i~~~le~v~g~~~~~~~~~ 159 (268)
-|+.+=-+...+|+|.||. +|++||+...+
T Consensus 26 R~l~IGYnRAariid~LE~-~GiVsp~~g~~ 55 (67)
T d2ve8a1 26 RKLKIGYNRAARMIEAMEM-AGVVTPMNTNG 55 (67)
T ss_dssp HHHTCCHHHHHHHHHHHHH-TTSBCCCCTTS
T ss_pred HHHhcchHHHHHHHHHHHH-CcCCCCCCCCC
Confidence 3333333557899999997 79999997643
No 2
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=38.37 E-value=13 Score=25.78 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhhhHHHHHhhhcccCCCCCCC
Q psy16996 129 LRTTLVAFWNSGITDELETVCGLLSPPRSPR 159 (268)
Q Consensus 129 ~r~~~~~~~~~~i~~~le~v~g~~~~~~~~~ 159 (268)
.|+.+=-+...+|+|.||. +|+++|+...+
T Consensus 29 R~l~IGYnRAariid~LE~-~GiVsp~~~~~ 58 (69)
T d2j5pa1 29 RQFRIGYNRAARIIEQMEA-QGIVSEQGHNG 58 (69)
T ss_dssp HHHTCCHHHHHHHHHHHHH-HTSBCCCCSSS
T ss_pred HHHhccchHHHHHHHHHHH-CCcCCCCCCCC
Confidence 3333334567899999997 79999986644
No 3
>d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.13 E-value=79 Score=23.63 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhhh----------HhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcccCCCC
Q psy16996 92 IRNTTERVENINQKVEDINQKENSQNSS----------IQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSPPR 156 (268)
Q Consensus 92 IR~TseRVE~M~~qL~EI~Eke~~ik~s----------L~~Ld~l~~~r~~~~~~~~~~i~~~le~v~g~~~~~~ 156 (268)
++.+..-|+.+.++|.++++...-|..- +..|+ .|.. ......|.-||++=+|.-||.
T Consensus 13 l~~~ek~v~~~~kkL~~l~~eL~giekGFL~~~l~~ea~~kl~----krik---~~~E~~Mk~LE~LDsl~lp~~ 80 (112)
T d1hx1b_ 13 LKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLD----RRVK---ATIEQFMKILEEIDTLILPEN 80 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTTH----HHHH---HHHHHHHHHHHHHTTCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH----HHHH---HHHHHHHHHHHHhhhccCcHH
Confidence 3445556777777888877775544432 22333 3332 223445778999999887763
No 4
>d2bnma1 a.35.1.3 (A:6-76) Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain {Streptomyces wedmorensis [TaxId: 43759]}
Probab=21.24 E-value=37 Score=23.26 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhHHhhhhhHhhhhhhhhHHHHHHHHH------------hhhhHHHHHhhhcccCCCC
Q psy16996 102 INQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFW------------NSGITDELETVCGLLSPPR 156 (268)
Q Consensus 102 M~~qL~EI~Eke~~ik~sL~~Ld~l~~~r~~~~~~~------------~~~i~~~le~v~g~~~~~~ 156 (268)
...+|++-+|+|.+--..|.++= -|. +.-+..| .++|+++|-+-.|-++||.
T Consensus 6 fae~lk~rreqvkmdhaalas~l--get-petvaawengeggeltltqlg~ia~~lgtsigaltppa 69 (71)
T d2bnma1 6 FAELLKDRREQVKMDHAALASLL--GET-PETVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPA 69 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH--TCC-HHHHHHHHTTTCTTCBHHHHHHHHHHTTSCTGGGSCCC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHH--cCC-chHHHHhhcCCCceeeHHHHHHHHHHHcccccccCCCC
Confidence 44567777777665555555542 111 1223333 5899999999999999884
No 5
>d2bskb1 g.83.1.1 (B:13-77) Mitochondrial import inner membrane translocase subunit Tim10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.89 E-value=1.6e+02 Score=19.32 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=23.7
Q ss_pred HHHHHHhhccCCcccccCcccccCCHHHHHHhhhHHHHHHHHHHHHH
Q psy16996 34 FIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREK 80 (268)
Q Consensus 34 LiK~l~rkc~~k~~~~d~~LKLfLs~dE~kKLhdFEE~CvEnYLrek 80 (268)
+.-.+|.+|..+.. -...|+..|..-+ ..|++.|+...
T Consensus 13 lt~~Cf~kCV~~~~-----~~~~L~~~E~~Ci----~~C~~ky~d~~ 50 (65)
T d2bskb1 13 MTSACHRKCVPPHY-----KEAELSKGESVCL----DRCVSKYLDIH 50 (65)
T ss_dssp HHHHHHHHHCCTTC-----CSSSCCHHHHHHH----HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCC-----CCCcCCchHHHHH----HHHHHHHHHHH
Confidence 44556677764221 1235788887777 47899988644
No 6
>d2bska1 g.83.1.1 (A:13-85) Mitochondrial import inner membrane translocase subunit Tim9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.48 E-value=1.7e+02 Score=19.61 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=23.2
Q ss_pred HHHHHHHhhccCCcccccCcccccCCHHHHHHhhhHHHHHHHHHHH
Q psy16996 33 LFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFR 78 (268)
Q Consensus 33 LLiK~l~rkc~~k~~~~d~~LKLfLs~dE~kKLhdFEE~CvEnYLr 78 (268)
-+.-.+|.+|..+.. ...|+..|..-+ ..|++.|+.
T Consensus 11 ~lte~Cf~kCv~~~~------~~~L~~~E~~Ci----~~Cv~Kf~~ 46 (73)
T d2bska1 11 KLTETCFLDCVKDFT------TREVKPEETTCS----EHCLQKYLK 46 (73)
T ss_dssp HHHHHHHHHHCCCCS------SSSCCHHHHHHH----HHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC------CCCCCchhHHHH----HHHHHHHHH
Confidence 455566777876433 335777777666 478888884
No 7
>d2nmla1 d.330.1.1 (A:2-101) Enhancer of rudimentary homolog, ERH {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.60 E-value=22 Score=26.43 Aligned_cols=15 Identities=20% Similarity=0.543 Sum_probs=14.0
Q ss_pred hhhhHHHHHhhhccc
Q psy16996 138 NSGITDELETVCGLL 152 (268)
Q Consensus 138 ~~~i~~~le~v~g~~ 152 (268)
|.|+.++||.|||+.
T Consensus 21 YeSv~~cmegiC~iY 35 (100)
T d2nmla1 21 YESVNECMEGVCKMY 35 (100)
T ss_dssp ESSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHH
Confidence 689999999999997
No 8
>d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]}
Probab=12.39 E-value=72 Score=20.02 Aligned_cols=19 Identities=0% Similarity=-0.053 Sum_probs=16.6
Q ss_pred HHHHHhhhhHHHHHhhhcc
Q psy16996 133 LVAFWNSGITDELETVCGL 151 (268)
Q Consensus 133 ~~~~~~~~i~~~le~v~g~ 151 (268)
|-+.++..||+++.+++|.
T Consensus 15 qK~~l~~~it~~~~~~~g~ 33 (59)
T d1otfa_ 15 QKETLIRQVSEAMANSLDA 33 (59)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 5678899999999999994
No 9
>d1t7sa_ a.7.7.1 (A:) BAG-family molecular chaperon regulator-1, BAG1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=12.27 E-value=2.8e+02 Score=20.89 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=16.9
Q ss_pred HHhhhhHHHHHhhhcccCCCCC
Q psy16996 136 FWNSGITDELETVCGLLSPPRS 157 (268)
Q Consensus 136 ~~~~~i~~~le~v~g~~~~~~~ 157 (268)
......|..||++=+|.-||.+
T Consensus 69 ~~~E~~Mk~LEtLDsl~l~~~~ 90 (129)
T d1t7sa_ 69 YFNEEAERHLETLDGMNIITET 90 (129)
T ss_dssp HHHHHHHHHHHHHHTEEECCCC
T ss_pred HHHHHHHHHHHHhhhhcCCccc
Confidence 3445568889999999998853
No 10
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=12.20 E-value=1.4e+02 Score=21.13 Aligned_cols=15 Identities=0% Similarity=-0.028 Sum_probs=11.5
Q ss_pred CCCCchHHHHHhhHh
Q psy16996 191 SEMSNPEMAVYLEKE 205 (268)
Q Consensus 191 ~e~s~~~~a~~~ek~ 205 (268)
-|||-.+..-+++++
T Consensus 82 vE~~~~eA~~~l~~r 96 (133)
T d1fxkc_ 82 IKKNFEDAMESIKSQ 96 (133)
T ss_dssp EEEEHHHHHHHHHHH
T ss_pred eeecHHHHHHHHHHH
Confidence 478888888887765
Done!