BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16997
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 1 MADTEVVSREEEKKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDT 60
M +TE E + K + T+PLV +DM +E+ E ++LC ACEK + N E A+++IK+T
Sbjct: 1 MGETEGKKEEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKET 60
Query: 61 MDKKYGPAWHVVVGETFGFEITYECKSLLYMFFGGNLAICMWKCS 105
MDKK+G +WHVV+GE FGFEIT+E K+LLY++FGG LA+C+WKCS
Sbjct: 61 MDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKCS 105
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 1 MADTEVVSREEEKKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDT 60
M +TE E + K + T+PLV +DM +E+ E ++LC ACEK + N E A+++IK+T
Sbjct: 1 MGETEGKKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKET 60
Query: 61 MDKKYGPAWHVVVGETFGFEITYECKSLLYMFFGGNLAICMWKCS 105
MDKK+G +WHVV+GE FGFEIT+E K+LLY++FGG LA+C+WKCS
Sbjct: 61 MDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKCS 105
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 1 MADTEVVSREEEKKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDT 60
M +TE E + K + T+PLV +DM +E+ E ++LC ACEK + N E A+++IK+T
Sbjct: 1 MGETEGKKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKET 60
Query: 61 MDKKYGPAWHVVVGETFGFEITYECKSLLYMFFGGNLAICMWKCS 105
MDKK+G +WHVV+GE FGFEIT+E K+LLY++FGG LA+C+WKCS
Sbjct: 61 MDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKCS 105
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 1 MADTEVVSREEEKKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDT 60
M +TE E + K + T+PLV +DM +E+ E ++LC ACEK + N E A+++IK+T
Sbjct: 1 MGETEGKKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKET 60
Query: 61 MDKKYGPAWHVVVGETFGFEITYECKSLLYMFFGGNLAICMWKCS 105
MDKK+G +WHVV+GE FGFEIT+E K+LLY++FGG LA+C+WKCS
Sbjct: 61 MDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKCS 105
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
+V +DM DE+ EV + A +H E AS VIK MD +YG WHV+VG +FG
Sbjct: 5 IVKASDMGDEMQQEVFRIAEEAMREHTLEREIAS-VIKKEMDSRYGHTWHVIVGRSFGSY 63
Query: 81 ITYECKSLLYMFFGGNLAICMWKC 104
+T+E +Y F+ G LA+ ++K
Sbjct: 64 VTHEKGKFVY-FYVGPLALLVFKT 86
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM+D++ + +D + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSDDMQQDAIDCATQALEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWKCS 105
+T+E K +Y F+ G +AI ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAILLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++E+ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDAVDCATQALEKY--NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E + +Y F+ G +AI ++K
Sbjct: 65 YVTHETRHFIY-FYLGQVAILLFK 87
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster GN=ctp
PE=1 SV=1
Length = 89
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++E+ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDAVDCATQALEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E + +Y F+ G +AI ++K
Sbjct: 65 YVTHETRHFIY-FYLGQVAILLFK 87
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++++ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEDMQQDAVDCATQAMEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAILLFK 87
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++++ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEDMQQDAVDCATQAMEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAILLFK 87
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++++ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEDMQQDAVDCATQAMEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAILLFK 87
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1
Length = 89
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++++ + VD + A EK+ N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEDMQQDAVDCATQAMEKY--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAILLFK 87
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM++E+ + VD + A EK+ N+E+ + IK D+K+ P WH +VG FG
Sbjct: 9 VIKNADMSEEMQADAVDCATQALEKY--NIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGS 66
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 67 YVTHETKHFIY-FYLGQVAILLFK 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1
PE=3 SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + V+ + A EK+ + A+ IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQQDSVECATQALEKYNIEKDIAAH-IKKEFDKKYNPTWHCIVGRNFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G +AI ++K
Sbjct: 66 VTHETKHFIY-FYLGQVAILLFK 87
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGF 79
++ DM +++ + VD + A EK N+E+ + IK DKKY P WH +VG FG
Sbjct: 7 VIKNADMPEDMQQDAVDCATQALEKF--NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 80 EITYECKSLLYMFFGGNLAICMWKCS 105
+T+E K +Y F+ G +A+ ++K
Sbjct: 65 YVTHETKHFIY-FYLGQVAVLLFKSG 89
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 20 PLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGF 79
P+V +D+ D+L +++ + A +K+ + A V K +D KYG WHV+VG+ FG
Sbjct: 9 PIVKASDITDKLKEDILTISKDALDKYQLERDIAGTV-KKQLDVKYGNTWHVIVGKNFGS 67
Query: 80 EITYECKSLLYMFFGGNLAICMWKCS 105
+T+E +Y F+ G LA ++K +
Sbjct: 68 YVTHEKGHFVY-FYIGPLAFLVFKTA 92
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 20 PLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGF 79
P++ +D+ DEL E+ +L S A + E A+ IK +D G WHV+VG+ FG
Sbjct: 4 PVLKASDITDELRDEIFELSSNATANYKLEREIAA-YIKKQLDVSQGETWHVIVGKNFGS 62
Query: 80 EITYECKSLLYMFFGGNLAICMWKCS 105
+T+E +Y F+ G LA ++K +
Sbjct: 63 YVTHEKGYFVY-FYIGPLAFLVFKTA 87
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ +D+ DEL E+ + A E+ E A+ IK +D K+G WHV+VG+ FG
Sbjct: 6 ILKASDITDELRDEIFGISVQAVEQFQLEREVAA-YIKKELDSKHGQTWHVIVGKNFGSY 64
Query: 81 ITYECKSLLYMFFGGNLAICMWKCS 105
+T+E +Y F+ G LA ++K +
Sbjct: 65 VTHEKGHFIY-FYIGPLAFLVFKTA 88
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DYN2 PE=3 SV=1
Length = 91
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 20 PLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGF 79
P++ +D+ +E+ T + +L + A + + A+ +K +D+ YG WHV+VG++FG
Sbjct: 8 PILKASDLPEEMQTRIFELSNEAVSNYKIEKDIAT-YLKKELDQLYGATWHVIVGKSFGS 66
Query: 80 EITYECKSLLYMFFGGNLAICMWKCS 105
+T+E Y F+ G LA ++K
Sbjct: 67 YVTHEQGFFTY-FYIGQLAFLIFKSG 91
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++E+ + + + + A +KH + A+ + KD D+KY P WH +VG FG
Sbjct: 7 VIKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKD-FDRKYHPTWHCIVGRHFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWKCS 105
+T+E + +Y F+ + A ++K
Sbjct: 66 VTHETHNFIY-FYLDDRAFLLFKSG 89
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudG
PE=3 SV=1
Length = 94
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 20 PLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGF 79
P + DM++++ E V++ A EK+ + A + IK D + G WH VVG FG
Sbjct: 11 PQIKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIA-QYIKREFDSRKGATWHCVVGRNFGS 69
Query: 80 EITYECKSLLYMFFGGNLAICMWK 103
+T+E K +Y F+ G+ AI ++K
Sbjct: 70 FVTHETKHFIY-FYLGHCAILLFK 92
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM++++ E + A EK + A+ IK DKK+ P WH +VG FG
Sbjct: 3 VIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAA-FIKREFDKKFSPTWHCIVGRNFGSF 61
Query: 81 ITYECKSLLYMFFGGNLAICMWKCS 105
+T+E + +Y F+ G +A ++K
Sbjct: 62 VTHESRHFIY-FYLGTVAFLLFKSG 85
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 22 VHKTDMADELMTEVVDLCSMACEKHAANLEQ-ASRVIKDTMDKKYGPAWHVVVGETFGFE 80
V DM D + + + A E+ N+E+ + +IK DKKY P WH +VG++FG
Sbjct: 10 VKNADMPDFMQQDATECTIKAFEE--TNIERDIAMIIKKEFDKKYSPTWHCIVGKSFGSF 67
Query: 81 ITYECKSLLYM 91
+T+E K+ +Y
Sbjct: 68 VTHETKNFIYF 78
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 21 LVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFE 80
++ DM +++ V + A +K+ + A+ IK D+KY P WH +VG+ FG
Sbjct: 7 VIKNADMHEDMQETAVHTAAAALDKYEIEKDVAA-YIKKEFDRKYNPNWHCIVGKHFGSY 65
Query: 81 ITYECKSLLYMFFGGNLAICMWKCS 105
+T+E + +Y F+ A ++K
Sbjct: 66 VTHETQHFIY-FYLQERAFLLFKSG 89
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 22 VHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFEI 81
V +TDM D V+ + A + + + A+ +K+ +DKK+G WHV+ G+ FG +
Sbjct: 8 VKETDMEDPQRDMVISVVREAQRLYNIDKDVAA-FVKEELDKKFGATWHVICGKCFGSRV 66
Query: 82 TYECKSLLYMFFGGNLAICMWKCS 105
+YE + + + + ++KC
Sbjct: 67 SYEMGHFI-LLKCNKVNVMIYKCG 89
>sp|B4RTU9|FADI_ALTMD 3-ketoacyl-CoA thiolase OS=Alteromonas macleodii (strain DSM 17117
/ Deep ecotype) GN=fadI PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 0.89, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 1 MADTEVVSREEEKKIVH-TYPLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRV--- 56
MA T +SREE+ K+ H ++ L ++ A +L +EV+ + E + A LE+ + V
Sbjct: 191 MAKTHQISREEQDKLAHRSHSLAAESWEAGKLSSEVM---TAYAEPYKAALERDNNVRFD 247
Query: 57 --------IKDTMDKKYG 66
++ DKKYG
Sbjct: 248 SKLEGYAKLRPVFDKKYG 265
>sp|Q12ZG2|DAPA_METBU 4-hydroxy-tetrahydrodipicolinate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=dapA PE=3 SV=1
Length = 291
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 15 IVHTYPLVHKTDMADELMTEVVDLCSMACEKHAA-NLEQASRVIKDTMDKKY 65
+++ P D++ E++TE+ + ++ K A+ NL++AS++I++TMD+ +
Sbjct: 129 VLYNVPSRTGQDISLEVITELAKIDNIVGIKEASGNLDKASQIIENTMDEDF 180
>sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus musculus GN=Ap3d1 PE=1 SV=1
Length = 1199
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 13 KKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLE 51
KK++ T DEL+T+++D+CS + +H N E
Sbjct: 378 KKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFE 416
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 13 KKIVHTYPLVHKTDMADELMTEVVDLCSMACEKHAANLE 51
KK++ T DEL+T+++D+CS + +H N E
Sbjct: 378 KKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFE 416
>sp|A6KX92|HUTI_BACV8 Imidazolonepropionase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=hutI PE=3 SV=1
Length = 414
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 20 PLVHKTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETF-G 78
P++H+ +A+ C + CEK +EQ+ +++K +G H +F G
Sbjct: 207 PMIHQKQLAEN--------CDIFCEKGVFTVEQSRKLLKAAQALGFGTKLHADEIVSFGG 258
Query: 79 FEITYECKSL 88
E+ E K+L
Sbjct: 259 AELAGELKAL 268
>sp|P97878|EXOC5_RAT Exocyst complex component 5 OS=Rattus norvegicus GN=Exoc5 PE=1 SV=1
Length = 708
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 24 KTDMADELMTEVVDLCSMACEKHAANLEQASRVIKDTMDKKYGPAWHVVVGETFGFEITY 83
KTD E V+ + AC K A + + IK++MD K + +G F +TY
Sbjct: 557 KTDFKPEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRF-HRLTY 615
Query: 84 E-CKSLLYMFFGGNLAIC 100
E + Y GG LAIC
Sbjct: 616 EHLQQYSYSCMGGMLAIC 633
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,367,692
Number of Sequences: 539616
Number of extensions: 1287375
Number of successful extensions: 2831
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2778
Number of HSP's gapped (non-prelim): 41
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)