BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy170
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1
Length = 532
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
KV VV+AYI R +DVNP +N IV+ R+ EA++EAHAVDQ L E + + L P
Sbjct: 64 KVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENKWPF 123
Query: 64 LGVPITIKGSIALKA 78
LGVP+T+K + L+
Sbjct: 124 LGVPLTVKEAFQLQG 138
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1
Length = 532
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 2 RIKVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
R +VTS +VV+AYI R ++VNP +NA+V++R++ A++EA VD+ + E ++ L
Sbjct: 60 RKEVTSVEVVQAYIDRIQEVNPLINAMVKDRFSAALQEAAQVDKLIEEETGGEDVLEDRL 119
Query: 62 PLLGVPITIKGSIALKA 78
PLLGVPIT+K + AL+
Sbjct: 120 PLLGVPITVKEAFALQG 136
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1
Length = 526
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 2 RIKVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
R +V+S +VV+AYI R ++VNP LNA++++R++ A+ EA D+ + E +E L
Sbjct: 59 RGEVSSVEVVQAYIDRIQEVNPLLNALIKDRFSAALLEAARADKLIKEENGGEEVLRNQF 118
Query: 62 PLLGVPITIKGSIALKA 78
PLLGVP+++K S L+
Sbjct: 119 PLLGVPMSVKESFGLQG 135
>sp|P59385|HYIN_BRAJA Indoleacetamide hydrolase OS=Bradyrhizobium japonicum (strain USDA
110) GN=bam PE=3 SV=1
Length = 524
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+++ + V A++ R R VNP LNA+V + EA++ AHA D+ +GG EL L
Sbjct: 74 ISAVETVEAHLDRMRAVNPRLNAVVVDLSKEALKAAHAADKQRAKGG----ELGL---LH 126
Query: 65 GVPITIKGSIALKARGSFD 83
GVPITIK ++ + R +F+
Sbjct: 127 GVPITIKENVDYEGRPNFN 145
>sp|Q313S5|GATA_DESDG Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio
desulfuricans (strain G20) GN=gatA PE=3 SV=1
Length = 487
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+T+E+ VRA I R P ++A++ R EA+ EA A+D + + K PL
Sbjct: 21 LTAEEAVRACIDRIEATEPAVHALLATRCEEALAEARAMDAAGYDPAK---------PLW 71
Query: 65 GVPITIK 71
GVP+T+K
Sbjct: 72 GVPVTVK 78
>sp|Q84DC4|MANHY_PSEPU Mandelamide hydrolase OS=Pseudomonas putida GN=mdlY PE=1 SV=1
Length = 507
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
++TS Q+V A++ R D + LNA + A A+++A + D L GG PL
Sbjct: 41 RITSRQLVEAWLSRIADFS-ELNAFISVDAAAALKQADSYDHYLEAGGDP-------LPL 92
Query: 64 LGVPITIKGSI 74
GVPI +K +I
Sbjct: 93 GGVPIAVKDNI 103
>sp|Q6NHQ1|GATA_CORDI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium
diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype
gravis) GN=gatA PE=3 SV=1
Length = 494
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+VTS +V +A++ R DV+ L+A + EA+ A AVD+SL +G LA
Sbjct: 27 EVTSREVTQAHLDRINDVDGTLHAFLHVGVEEALAAADAVDESLDKGEAPASALA----- 81
Query: 64 LGVPITIK 71
GVP+ +K
Sbjct: 82 -GVPLALK 88
>sp|B4S4W1|GATA_PROA2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prosthecochloris
aestuarii (strain DSM 271 / SK 413) GN=gatA PE=3 SV=1
Length = 477
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 4 KVTSEQVVRAYILR---CRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARD 60
+++ E VV AY+ R RD N Y++ Y EA+R+A ++D+ L+ G+T +
Sbjct: 17 EMSCEAVVTAYLQRIEATRDRNIYISVF----YDEALRQARSLDRK-LDAGETPGK---- 67
Query: 61 TPLLGVPITIKGSIALKARG 80
L G+P+ IK +I+++ G
Sbjct: 68 --LFGMPMAIKDNISIEGTG 85
>sp|Q820J1|GATA_NITEU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=gatA PE=3
SV=1
Length = 486
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
K++S ++ ++ R + +NP LNA + +++ +A+ D+ + G R TPL
Sbjct: 17 KISSTELTSEFLSRIKALNPDLNAFITIDEEKSLDQANVADKMIAAG--------RSTPL 68
Query: 64 LGVPITIK 71
G+PI K
Sbjct: 69 TGIPIAQK 76
>sp|A9WPN2|GATA_RENSM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Renibacterium
salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484
/ NBRC 15589 / NCIMB 2235) GN=gatA PE=3 SV=1
Length = 520
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+VTS QV +AY+ R V+ LNA + EA+R A VD G + E L
Sbjct: 20 EVTSVQVTQAYLDRIALVDGELNAFLHLNAEEALRVAAEVDADRAAGKELHE-------L 72
Query: 64 LGVPITIKGSIALKAR 79
GVPI IK I K +
Sbjct: 73 AGVPIAIKDLIVTKGQ 88
>sp|A4SGD2|GATA_PROVI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prosthecochloris
vibrioformis (strain DSM 265) GN=gatA PE=3 SV=1
Length = 482
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 4 KVTSEQVVRAYILRCR---DVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARD 60
+V+ E+VVR Y+ R D N YL +E AI A A+D+ L EGG+
Sbjct: 17 EVSCEEVVRVYLERIERHGDDNIYLTVFRDE----AIERAAALDRKLREGGEPGR----- 67
Query: 61 TPLLGVPITIKGSIALKA 78
L G+P+ IK +I++
Sbjct: 68 --LFGLPMAIKDNISMDG 83
>sp|B0K3S3|GATA_THEPX Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Thermoanaerobacter sp. (strain X514) GN=gatA PE=3
SV=1
Length = 488
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V++ +V ++Y+ R ++V P ++A+V A+++A D+ + +G DT L
Sbjct: 19 EVSALEVTKSYLERIKEVEPKIDALVTITEDFALQKAKEADEKIKKG--------EDTAL 70
Query: 64 LGVPITIKGSIA 75
G+P+ IK +I+
Sbjct: 71 TGIPVIIKDNIS 82
>sp|A9KJ26|GATA_CLOPH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=gatA PE=3 SV=1
Length = 494
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+++ E+ V+A + PY ++ + EA+ +A + Q +E GK D+PL
Sbjct: 19 ELSVEEAVKATFSAIKKREPYYHSYITVNEEEALEQASKI-QIAIEAGKFA-----DSPL 72
Query: 64 LGVPITIKGSIALKA 78
GVPI IK +I +K
Sbjct: 73 AGVPIAIKDNICVKG 87
>sp|B4SCS6|GATA_PELPB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gatA
PE=3 SV=1
Length = 475
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 5 VTSEQVVRAYILRC---RDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
+T E+VVR Y+ R R N Y+ + +A+ A +D+ L EGG +
Sbjct: 18 ITCEEVVRFYLERIENHRGDNIYITVF----HDQALERARTLDRKLREGGNPGK------ 67
Query: 62 PLLGVPITIKGSIALK 77
L G+P+ IK +IA+K
Sbjct: 68 -LFGMPMAIKDNIAMK 82
>sp|Q891I1|GATA_CLOTE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
tetani (strain Massachusetts / E88) GN=gatA PE=3 SV=1
Length = 485
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V E+VV++Y+ R V+ + A + EAI++A +D + +G K L
Sbjct: 19 EVKVEEVVQSYLNRIEKVDSKVGAFLYTGSEEAIKKAKELDNKISKGESLK-------AL 71
Query: 64 LGVPITIKGSIALKA 78
G+P++IK +I++K
Sbjct: 72 GGIPVSIKDNISVKG 86
>sp|Q1MPY8|GATA_LAWIP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=gatA PE=3 SV=1
Length = 485
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 8 EQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVP 67
E+V +A + R P +NA + EA+ EA +DQS + K PL G+P
Sbjct: 24 EEVTQACLDRIIATEPTINAFITICAEEALSEAKKLDQSTPDPKK---------PLWGIP 74
Query: 68 ITIKGSIALK 77
I +K +I K
Sbjct: 75 IAVKDNILTK 84
>sp|B0KBN4|GATA_THEP3 Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=gatA PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V++ +V ++Y+ R ++V P ++A++ A++ A D+ + G DT L
Sbjct: 19 EVSALEVTKSYLERIKEVEPKIDALITITEDFALQRAKEADEKIKNG--------EDTAL 70
Query: 64 LGVPITIKGSIA 75
G+P+ IK +I+
Sbjct: 71 TGIPVIIKDNIS 82
>sp|Q3ATD7|GATA_CHLCH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium
chlorochromatii (strain CaD3) GN=gatA PE=3 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 14/74 (18%)
Query: 8 EQVVRAYILR---CRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
E+VVR+Y+ R R+ N ++ + ER A+ A +D+ L EGG + L
Sbjct: 21 EEVVRSYLERIDAAREDNIFIT-VFHER---ALERARMLDRKLAEGGTVGK-------LF 69
Query: 65 GVPITIKGSIALKA 78
G+P+ IK +IA+K
Sbjct: 70 GLPMAIKDNIAMKG 83
>sp|A0LSR0|GATA_ACIC1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus
cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3
SV=1
Length = 505
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V++E+V RA++ R V+P ++A + A+ A AVD L G E L PL
Sbjct: 20 EVSAEEVTRAHLDRIAAVDPAVHAFLYVDADGALTAARAVDARLAAG----ERLG---PL 72
Query: 64 LGVPITIK 71
GVP+ +K
Sbjct: 73 AGVPLALK 80
>sp|Q97EX8|GATA2_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=gatA2 PE=3 SV=1
Length = 478
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+ SE +V+AY + P +NA + A++EA VD+ + G K L
Sbjct: 20 LKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVDKKIANGDKVGR-------LA 72
Query: 65 GVPITIKGSI 74
G+PI IK +I
Sbjct: 73 GIPIAIKDNI 82
>sp|B2UZ26|GATA_CLOBA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3
SV=1
Length = 485
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V+ E+V +A++ ++++ +NA + EA+ +A A+D+ L +G D L
Sbjct: 19 EVSVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKALDEKLSKG--------EDIGL 70
Query: 64 L-GVPITIKGSIALK 77
L G P+ IK +I++K
Sbjct: 71 LGGAPLGIKDNISVK 85
>sp|O59805|YJV7_SCHPO Putative amidase C550.07 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC550.07 PE=3 SV=1
Length = 533
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
KVTS ++V A+ R +N + E Y EA+ A +D+ + G PL
Sbjct: 71 KVTSVELVTAFCKRAAIAQQLVNCVNELFYEEALARAAELDEYYAKTGSLV------GPL 124
Query: 64 LGVPITIKGSIALK---ARGSF 82
GVP+++K I++K A SF
Sbjct: 125 HGVPVSVKEHISIKNHTATASF 146
>sp|Q3AKH0|GATA_SYNSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus
sp. (strain CC9605) GN=gatA PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V+S ++V ++ R P LNA VE +A EA +D++ G E L PL
Sbjct: 19 EVSSRELVDQHLKRLESSEPSLNAFVEVTADQARAEASRIDEARAAG----EALG---PL 71
Query: 64 LGVPITIKGSIALK 77
G+P+ IK ++ K
Sbjct: 72 AGLPLAIKDNLCTK 85
>sp|Q7U7F4|GATA_SYNPX Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus
sp. (strain WH8102) GN=gatA PE=3 SV=1
Length = 486
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
V+S ++V ++ R P LNA VE A +A VDQ+ G E+L PL
Sbjct: 15 VSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQARAAG----EDLG---PLA 67
Query: 65 GVPITIKGSIALK 77
G+P+ IK ++ +
Sbjct: 68 GLPLAIKDNLCTR 80
>sp|B2TIZ9|GATA_CLOBB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Eklund 17B / Type B) GN=gatA PE=3
SV=1
Length = 485
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 8 EQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL-GV 66
E+V +A++ ++++ +NA + EA+ +A A+D+ L +G D LL G
Sbjct: 23 EEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALDEKLSKG--------EDIGLLGGA 74
Query: 67 PITIKGSIALK 77
P+ IK +I++K
Sbjct: 75 PLGIKDNISVK 85
>sp|Q97FQ7|GATA1_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=gatA1 PE=3 SV=1
Length = 485
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V E+V +++ R +V+ +NA++ EA+ A +D+ + G E L + L
Sbjct: 19 EVKVEEVTNSFLNRIEEVDEKVNALLYVAKEEAVNTAKELDKKIESG----ESL---SGL 71
Query: 64 LGVPITIKGSIALK 77
GVP+ IK +I++K
Sbjct: 72 SGVPVAIKDNISVK 85
>sp|Q2JUM6|GATA_SYNJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus
sp. (strain JA-3-3Ab) GN=gatA PE=3 SV=1
Length = 509
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 6 TSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLG 65
++E++ R Y+ R + P L + + A+++A AVD + G EE+ PL G
Sbjct: 17 SAEEIAREYLERLAQLEPQLKSFITVTEELALQQAKAVDARIRAG----EEIG---PLAG 69
Query: 66 VPITIKGSIALKA 78
+P+ +K ++ +
Sbjct: 70 IPLAVKDNLCTQG 82
>sp|B1L1G9|GATA_CLOBM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=gatA PE=3
SV=1
Length = 485
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V +E++ RA++ R V+ L A + EAI++A +D + + EEL L
Sbjct: 19 EVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGKI----EKNEEL---KAL 71
Query: 64 LGVPITIKGSIALKA 78
G+P+ IK +I +K
Sbjct: 72 SGIPVGIKDNINVKG 86
>sp|B1I3K2|GATA_DESAP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulforudis
audaxviator (strain MP104C) GN=gatA PE=3 SV=1
Length = 492
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V++ ++ R+ + R +V + A V A+R+A AVD+ L G EL PL
Sbjct: 19 EVSAAELCRSVLNRIDEVEGRVKAYVTLDREGALRQAAAVDRELQNG----RELP---PL 71
Query: 64 LGVPITIKGSIALKA 78
G+P IK +I L+
Sbjct: 72 AGIPFAIKDNICLRG 86
>sp|C3KU97|GATA_CLOB6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1
Length = 485
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V +E++ RA++ R V+ L A + EAI++A +D + + EEL L
Sbjct: 19 EVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGKI----EKNEEL---KAL 71
Query: 64 LGVPITIKGSIALKA 78
G+P+ IK +I +K
Sbjct: 72 SGIPVGIKDNINVKG 86
>sp|Q1GYD3|GATA_METFK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gatA
PE=3 SV=1
Length = 490
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+++S ++ + Y+ R +NP +NA + ++ +A A DQ + G PL
Sbjct: 17 EISSVELTQEYLNRIAQLNPEINAYITVNPELSLAQAQAADQRIANGDA--------GPL 68
Query: 64 LGVPITIK 71
G+PI K
Sbjct: 69 TGIPIAQK 76
>sp|C1FLD9|GATA_CLOBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1
Length = 485
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V +E++ RA++ R V+ L A + EAI++A +D + + EEL L
Sbjct: 19 EVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVKI----EKNEEL---KAL 71
Query: 64 LGVPITIKGSIALKA 78
G+P+ IK +I +K
Sbjct: 72 SGIPVGIKDNINVKG 86
>sp|Q6MRL7|GATA_BDEBA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB
9529 / HD100) GN=gatA PE=3 SV=1
Length = 490
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+++++V ++ R ++NP LNA +A++EA AVD + G D LL
Sbjct: 20 ISAKEVTLHFLKRIENLNPKLNAFTSLN-PQAVQEAEAVDARIANG--------EDVGLL 70
Query: 65 -GVPITIK 71
GVP IK
Sbjct: 71 AGVPFGIK 78
>sp|Q2GJX4|GATA_ANAPZ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma
phagocytophilum (strain HZ) GN=gatA PE=3 SV=1
Length = 491
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 2 RIKVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
R + + ++V AYI + N LNA V + A+ +A V+ LL+G K +
Sbjct: 19 RKEFSPTELVEAYIDEMENEN--LNAFVTKTQDIALEQARKVENLLLQGEKI-------S 69
Query: 62 PLLGVPITIK 71
PL G+PI +K
Sbjct: 70 PLAGMPIGVK 79
>sp|Q9ZE10|GATA_RICPR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia
prowazekii (strain Madrid E) GN=gatA PE=3 SV=1
Length = 493
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 13/68 (19%)
Query: 6 TSEQVVRAYILRCRDVNPY--LNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
TS+++V AYI + + Y LNA V E + A+++A A DQ+ G+ K AR L
Sbjct: 22 TSKELVNAYI---KQIEKYKNLNAYVTETFDLALKQAEAADQNY---GQNK---ART--L 70
Query: 64 LGVPITIK 71
G+P +K
Sbjct: 71 EGIPFAVK 78
>sp|A6LS60|PYRE_CLOB8 Orotate phosphoribosyltransferase OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=pyrE PE=3 SV=1
Length = 224
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 12/54 (22%)
Query: 31 ERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVPITIKGSIALKARGSFDL 84
E YAEAI+E A D +L G K G+P+++ SIAL + SFD+
Sbjct: 51 EFYAEAIKENFADDYDVLFGPAYK----------GIPLSVTTSIALSS--SFDI 92
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA
PE=3 SV=1
Length = 485
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V ++V A+I R V P + A V A+ +A DQ L TK E D L
Sbjct: 19 EVKPSEIVEAFIERKNQVEPKIKAYVTALDDLALEKAKKRDQEL-----TKLENIPD--L 71
Query: 64 LGVPITIKGSIALK 77
G+PI IK +I+ K
Sbjct: 72 FGLPIAIKDNISTK 85
>sp|Q9URY4|YI01_SCHPO Putative amidase C869.01 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC869.01 PE=3 SV=1
Length = 583
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+TS +V Y+ R VNPY+N I++ + + A +D G + R PL
Sbjct: 83 LTSTDIVHCYLDRYLQVNPYVNGILQLN-PDVLTIASELDDERANG------IIRG-PLH 134
Query: 65 GVPITIKGSIALKAR 79
G+P +K + A K +
Sbjct: 135 GIPFIVKDNFATKDK 149
>sp|O66610|GATA_AQUAE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Aquifex aeolicus
(strain VF5) GN=gatA PE=1 SV=1
Length = 478
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 2 RIKVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
R +V+ ++VV ++ R + A + Y +A+++A ++ + R+
Sbjct: 16 RGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKE-------------REL 62
Query: 62 PLLGVPITIKGSI 74
PL G+PI +K +I
Sbjct: 63 PLFGIPIAVKDNI 75
>sp|A6TTJ8|GATA_ALKMQ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus
metalliredigens (strain QYMF) GN=gatA PE=3 SV=1
Length = 491
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+ T + VV+ YI R ++++ +NA + A+ EA +D+ L G EE+ L
Sbjct: 19 QFTVKDVVQGYIDRIKELDGKINAFITLCEESALMEAAVLDEKLSRG----EEIGL---L 71
Query: 64 LGVPITIKGSIALKA 78
G+P+ IK ++ +
Sbjct: 72 GGIPVAIKDNMCTQG 86
>sp|Q0AFP4|GATA_NITEC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas
eutropha (strain C91) GN=gatA PE=3 SV=1
Length = 486
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
K++S ++ ++ R + +NP LNA + +++ +A D+ + G + T L
Sbjct: 17 KISSTELTGEFLARIKALNPDLNAFITMDEEKSLDQARTADEMIATG--------QSTLL 68
Query: 64 LGVPITIK 71
G+PI K
Sbjct: 69 TGIPIAQK 76
>sp|Q83BM9|GATA_COXBU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella
burnetii (strain RSA 493 / Nine Mile phase I) GN=gatA
PE=3 SV=1
Length = 483
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++S ++ + ++ R + +NP LN+ + A+ +A A D L +G T L
Sbjct: 18 ISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEATS--------LT 69
Query: 65 GVPITIK 71
G+PI K
Sbjct: 70 GIPIAQK 76
>sp|A9N8Z4|GATA_COXBR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella
burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3
SV=1
Length = 483
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++S ++ + ++ R + +NP LN+ + A+ +A A D L +G T L
Sbjct: 18 ISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEATS--------LT 69
Query: 65 GVPITIK 71
G+PI K
Sbjct: 70 GIPIAQK 76
>sp|A9KBI0|GATA_COXBN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella
burnetii (strain Dugway 5J108-111) GN=gatA PE=3 SV=1
Length = 483
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++S ++ + ++ R + +NP LN+ + A+ +A A D L +G T L
Sbjct: 18 ISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEATS--------LT 69
Query: 65 GVPITIK 71
G+PI K
Sbjct: 70 GIPIAQK 76
>sp|B6IZ25|GATA_COXB2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella
burnetii (strain CbuG_Q212) GN=gatA PE=3 SV=1
Length = 483
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++S ++ + ++ R + +NP LN+ + A+ +A A D L +G T L
Sbjct: 18 ISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEATS--------LT 69
Query: 65 GVPITIK 71
G+PI K
Sbjct: 70 GIPIAQK 76
>sp|B6J4H5|GATA_COXB1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella
burnetii (strain CbuK_Q154) GN=gatA PE=3 SV=1
Length = 483
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++S ++ + ++ R + +NP LN+ + A+ +A A D L +G T L
Sbjct: 18 ISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEATS--------LT 69
Query: 65 GVPITIK 71
G+PI K
Sbjct: 70 GIPIAQK 76
>sp|O29823|Y426_ARCFU Uncharacterized protein AF_0426 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0426 PE=4 SV=1
Length = 312
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 21 VNPYLNAIVEERYAEAIREAHAVDQSLLEG----GKTKEELAR-DTPLLGVPITIKGSIA 75
V P + V +R + +RE V++ +LEG GK +E+L R + LLG P GS
Sbjct: 108 VYPDVQIFVGKRACKKLRELSKVERRILEGRIELGKGREKLLRLEGKLLGYPDCCVGSYI 167
Query: 76 LKARG 80
RG
Sbjct: 168 ESKRG 172
>sp|A5G9J9|GATA_GEOUR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter
uraniireducens (strain Rf4) GN=gatA PE=3 SV=1
Length = 485
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V+S + RA + R V P +NA + EA++ A A D+ + G D L
Sbjct: 19 EVSSVEATRALLARIDAVEPRVNAFITVTPEEALKNAEAADRRIAAG---------DMQL 69
Query: 64 L-GVPITIK 71
L G+PI +K
Sbjct: 70 LTGIPIALK 78
>sp|B0TWN0|GATA_FRAP2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=gatA PE=3 SV=1
Length = 481
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+VT+ ++ + Y+ + +D + +N+++ AEA++EA D +++ GK + L
Sbjct: 15 EVTAVELTKQYLAKIKDQDKSINSVITLCEAEALKEAENAD-AIISAGK-------QSLL 66
Query: 64 LGVPITIK 71
G+PI K
Sbjct: 67 TGIPILHK 74
>sp|Q11IL4|GATA_MESSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mesorhizobium
sp. (strain BNC1) GN=gatA PE=3 SV=1
Length = 493
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+ T+ ++ AY+ + N LNA + +A A A D L++GG AR PL
Sbjct: 20 EFTALELTEAYLSAIQTANEKLNAYITVTADKAREMAKASDMRLMQGG------AR--PL 71
Query: 64 LGVPITIK 71
GVP+ IK
Sbjct: 72 EGVPLGIK 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,111,075
Number of Sequences: 539616
Number of extensions: 1035079
Number of successful extensions: 3455
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 3412
Number of HSP's gapped (non-prelim): 110
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)