RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy170
(84 letters)
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional.
Length = 469
Score = 58.8 bits (143), Expect = 6e-12
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
V++ + A + R VNP +NA+V+ R EA+ +A AVD + G PL
Sbjct: 21 DVSAREAAEAALARLDAVNPAINAVVDHRPEEALAQADAVDAARARGDDPG-------PL 73
Query: 64 LGVPITIK 71
GVP+T+K
Sbjct: 74 AGVPVTVK 81
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit
A; Reviewed.
Length = 459
Score = 51.7 bits (125), Expect = 2e-09
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
++++ ++ +AY+ R +V+P LNA + EA+ +A A D L G PL
Sbjct: 5 EISAVELTQAYLDRIEEVDPKLNAFITVTEEEALAQAKAADAKLAAGE--------AGPL 56
Query: 64 LGVPITIK 71
G+PI IK
Sbjct: 57 AGIPIAIK 64
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
and related amidases [Translation, ribosomal structure
and biogenesis].
Length = 475
Score = 50.0 bits (120), Expect = 9e-09
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVE--ERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
++++ ++V AY+ R +NP LNA V A A+ EA A D L G
Sbjct: 20 ELSAVELVEAYLARIEALNPDLNAFVAVDPEAALALAEAAAADARLAAGEPLG------- 72
Query: 62 PLLGVPITIKGSIALK 77
PL GVPI +K +I
Sbjct: 73 PLAGVPIAVKDNIDTA 88
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional.
Length = 482
Score = 47.1 bits (112), Expect = 9e-08
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+VT ++V I + + +NP LNAIV ERY EA+ EA D S GK P
Sbjct: 17 QVTPLELVTQAIYKAKKLNPTLNAIVSERYEEALEEAKQRDFS----GK---------PF 63
Query: 64 LGVPITIK 71
GVPI +K
Sbjct: 64 AGVPIFLK 71
>gnl|CDD|216494 pfam01425, Amidase, Amidase.
Length = 431
Score = 46.1 bits (110), Expect = 2e-07
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 10 VVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVPIT 69
+V AY+ R NP LNA V + EA+ +A A D+ PL GVPI+
Sbjct: 2 LVEAYLDRAEAANPKLNAFVTVFFEEALAQAKAADKRR--------ARKEKGPLHGVPIS 53
Query: 70 IKGSIALK 77
+K +I +K
Sbjct: 54 LKDNIDVK 61
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional.
Length = 490
Score = 45.0 bits (107), Expect = 5e-07
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V+S ++ I R + +NAIV + A A A D + G PL
Sbjct: 25 EVSSVELTDLAIARIERHDGKINAIVVRDFDRARAAARAADAARARGE--------RGPL 76
Query: 64 LGVPITIKGS 73
LG+P+T+K S
Sbjct: 77 LGIPVTVKES 86
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional.
Length = 462
Score = 42.6 bits (100), Expect = 4e-06
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
+T+ ++ Y+ R ++ +L A + A EA A Q L G + PLL
Sbjct: 23 LTAPMLLEVYLQRIERLDSHLRAYRVVLFDRARAEAEAAQQRLDAGER--------LPLL 74
Query: 65 GVPITIKGSI 74
GVPI IK +
Sbjct: 75 GVPIAIKDDV 84
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional.
Length = 484
Score = 41.5 bits (98), Expect = 8e-06
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 14/72 (19%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAI-REAHAVDQSLLEGGKTKEELARDT- 61
+V+ +V+RAY+ VNP +NAIV R +A+ EA D LAR
Sbjct: 25 QVSCVEVMRAYLAHIERVNPAVNAIVALRDRDALLAEAAEKD----------AALARGEY 74
Query: 62 --PLLGVPITIK 71
L G+P K
Sbjct: 75 RGWLHGMPQAPK 86
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional.
Length = 483
Score = 37.8 bits (88), Expect = 2e-04
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
VTS ++VR + R P LNA R A+ EA D+ G PLL
Sbjct: 32 VTSVELVRRSLRRIEASQPTLNAFRVVRAEAALAEAAEADRRRAAG--------DRLPLL 83
Query: 65 GVPITIK 71
GVPI +K
Sbjct: 84 GVPIAVK 90
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional.
Length = 468
Score = 34.6 bits (80), Expect = 0.002
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
V++ +VV A I R VNP LNA+ + A A ++
Sbjct: 29 VSAAEVVEAAIARAEAVNPALNALAYAAFDRARDRA-------------ARPGSQGGFFS 75
Query: 65 GVPITIKGSIALK 77
GVP IK ++ +
Sbjct: 76 GVPTFIKDNVDVA 88
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated.
Length = 472
Score = 33.8 bits (78), Expect = 0.004
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 5 VTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLL 64
++ ++V A + R LNA A+ A +D G L
Sbjct: 25 LSCLELVEALLARA-AALAPLNAFTTVDAEGALAAARRIDAQRAAG--------AALLLA 75
Query: 65 GVPITIKGSIA 75
GVPI IK +I
Sbjct: 76 GVPIVIKDNIN 86
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional.
Length = 497
Score = 33.6 bits (77), Expect = 0.005
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 6 TSEQVVRAY---ILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTP 62
+ Q+ RAY I R P LNA++E +A +A A+D + GK + P
Sbjct: 21 PASQLTRAYLQRIARIDRDGPRLNAVIELN-PDAEADAAALDAE-RKAGKVR------GP 72
Query: 63 LLGVPITIKGSIA 75
L G+P+ +K +I
Sbjct: 73 LHGIPVLLKDNID 85
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional.
Length = 536
Score = 31.8 bits (72), Expect = 0.021
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 4 KVTSEQVVRAYILRCR--DVNPY-LNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARD 60
K++ E++ Y+ R + D N LN++ E A+ EA +DQ E + K+
Sbjct: 84 KLSYEELTSIYLFRIQEHDQNGITLNSVTEIN-PNAMEEARKLDQ---ERSRNKK----- 134
Query: 61 TPLLGVPITIKGSI 74
+ L G+P+ +K ++
Sbjct: 135 SNLYGIPVVVKDNV 148
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional.
Length = 491
Score = 30.2 bits (68), Expect = 0.085
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 4 KVTSEQVVRAYILR--CRDVN-PYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARD 60
K+TS+++V Y+ R D + P +N+I+E +AI A A+D G
Sbjct: 26 KLTSKELVMYYLHRIAKYDQDGPKINSILEIN-PDAIFIAEALDHERKIKGVR------- 77
Query: 61 TPLLGVPITIKGSIA 75
PL G+P+ +K +I
Sbjct: 78 GPLHGIPVLLKDNIE 92
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional.
Length = 465
Score = 29.2 bits (66), Expect = 0.18
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
++++ V +A + R NP LNA A+ EA +D + G E L PL
Sbjct: 20 ELSARAVAQATLARIARANPQLNAFTAVTAERALAEAARIDAARAAG----EPLG---PL 72
Query: 64 LGVPITIK 71
GVP +K
Sbjct: 73 AGVPFAVK 80
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional.
Length = 464
Score = 26.5 bits (59), Expect = 1.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 9 QVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVPI 68
+ V A+I R P+LNA+ A A A +G PL GVP+
Sbjct: 28 EAVLAHIARWE---PHLNALYAFDPEAARAAARASTARWAKG-------EPLGPLDGVPV 77
Query: 69 TIKGSIALK 77
TIK +IA +
Sbjct: 78 TIKENIATR 86
>gnl|CDD|217076 pfam02511, Thy1, Thymidylate synthase complementing protein.
Thymidylate synthase complementing protein (Thy1)
complements the thymidine growth requirement of the
organisms in which it is found, but shows no homology to
thymidylate synthase.
Length = 189
Score = 26.0 bits (58), Expect = 2.0
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 6 TSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELAR 59
+ Y+ + E + EA+ EA+ + LLE G E AR
Sbjct: 83 VELKEEEFYVPPELREQDEEAKELLEEFEEAMEEAYEAYEELLEKGI-AREDAR 135
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family. Members of
this protein family are aminohydrolases related to, but
distinct from, glutamyl-tRNA(Gln) amidotransferase
subunit A. The best characterized member is the biuret
hydrolase of Pseudomonas sp. ADP, which hydrolyzes
ammonia from the three-nitrogen compound biuret to
yield allophanate. Allophanate is also an intermediate
in urea degradation by the urea carboxylase/allophanate
hydrolase pathway, an alternative to urease [Unknown
function, Enzymes of unknown specificity].
Length = 452
Score = 25.9 bits (57), Expect = 2.5
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPL 63
+V++ V A + R + LNA A+ +A +D L G L PL
Sbjct: 13 RVSARAVAEATLARINQADGGLNAFTAVTAERALADAARIDADLAAG----SPLG---PL 65
Query: 64 LGVPITIK 71
GVP +K
Sbjct: 66 AGVPFAVK 73
>gnl|CDD|169692 PRK09174, PRK09174, F0F1 ATP synthase subunit B'; Validated.
Length = 204
Score = 25.1 bits (55), Expect = 4.0
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 15/61 (24%)
Query: 1 MRIKVTSEQVVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARD 60
R+K ++ V AY E+ A+A +AH++ Q+ E K K E R
Sbjct: 97 ARLKQEADAAVAAY---------------EQELAQARAKAHSIAQAAREAAKAKAEAERA 141
Query: 61 T 61
Sbjct: 142 A 142
>gnl|CDD|191164 pfam05019, Coq4, Coenzyme Q (ubiquinone) biosynthesis protein Coq4.
Coq4p was shown to peripherally associate with the
matrix face of the mitochondrial inner membrane. The
putative mitochondrial- targeting sequence present at
the amino-terminus of the polypeptide efficiently
imported it to mitochondria. The function of Coq4p is
unknown, although its presence is required to maintain a
steady-state level of Coq7p, another component of the Q
biosynthetic pathway. The overall structure of Coq4 is
alpha helical and shows resemblance to
haemoglobin/myoglobin (information from TOPSAN).
Length = 222
Score = 25.3 bits (56), Expect = 4.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 63 LLGVPITIKGSIALKA 78
L G+P ++G +A+KA
Sbjct: 132 LTGLPTNMEGEVAVKA 147
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional.
Length = 466
Score = 25.0 bits (55), Expect = 5.2
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 10 VVRAYILRCRDVNPYLNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVPIT 69
+A + R +P +NA A+ A A ++ G E L GVP++
Sbjct: 26 ATQAVLDRIDRRDPAVNAFCLVDAEGALAAARASEERWRRG----EPCG---LLDGVPVS 78
Query: 70 IK 71
IK
Sbjct: 79 IK 80
>gnl|CDD|176002 cd04037, C2E_Ferlin, C2 domain fifth repeat in Ferlin. Ferlins
are involved in vesicle fusion events. Ferlins and
other proteins, such as Synaptotagmins, are implicated
in facilitating the fusion process when cell membranes
fuse together. There are six known human Ferlins:
Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin
(Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these
genes can lead to a wide range of diseases including
muscular dystrophy (dysferlin), deafness (otoferlin),
and infertility (fer-1, fertilization factor-1).
Structurally they have 6 tandem C2 domains, designated
as (C2A-C2F) and a single C-terminal transmembrane
domain, though there is a new study that disputes this
and claims that there are actually 7 tandem C2 domains
with another C2 domain inserted between C2D and C2E.
In a subset of them (Dysferlin, Myoferlin, and Fer1)
there is an additional conserved domain called DysF. C2
domains fold into an 8-standed beta-sandwich that can
adopt 2 structural arrangements: Type I and Type II,
distinguished by a circular permutation involving their
N- and C-terminal beta strands. Many C2 domains are
Ca2+-dependent membrane-targeting modules that bind a
wide variety of substances including bind
phospholipids, inositol polyphosphates, and
intracellular proteins. Most C2 domain proteins are
either signal transduction enzymes that contain a
single C2 domain, such as protein kinase C, or membrane
trafficking proteins which contain at least two C2
domains, such as synaptotagmin 1. However, there are a
few exceptions to this including RIM isoforms and some
splice variants of piccolo/aczonin and intersectin
which only have a single C2 domain. C2 domains with a
calcium binding region have negatively charged
residues, primarily aspartates, that serve as ligands
for calcium ions. This cd contains the fifth C2 repeat,
C2E, and has a type-II topology.
Length = 124
Score = 24.8 bits (55), Expect = 5.3
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 10 VVRAYILRCRDVNP 23
+VR Y++R R++ P
Sbjct: 1 LVRVYVVRARNLQP 14
>gnl|CDD|227827 COG5540, COG5540, RING-finger-containing ubiquitin ligase
[Posttranslational modification, protein turnover,
chaperones].
Length = 374
Score = 25.0 bits (54), Expect = 6.0
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 33 YAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVPITIKGS 73
++ E + VD+ G +T+E+ R+ I+GS
Sbjct: 138 EVPSVEERNLVDRCNRRGNETEEDPTRERRRTRFKGVIRGS 178
>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members. This
group contains a structure identified as an arginate
lyase. Other members are identified quinone reductases,
alginate lyases, and other proteins related to the
zinc-dependent dehydrogenases/reductases. QOR catalyzes
the conversion of a quinone and NAD(P)H to a
hydroquinone and NAD(P+. Quinones are cyclic diones
derived from aromatic compounds. Membrane bound QOR acts
in the respiratory chains of bacteria and mitochondria,
while soluble QOR acts to protect from toxic quinones
(e.g. DT-diaphorase) or as a soluble eye-lens protein in
some vertebrates (e.g. zeta-crystalin). QOR reduces
quinones through a semi-quinone intermediate via a
NAD(P)H-dependent single electron transfer. QOR is a
member of the medium chain dehydrogenase/reductase
family, but lacks the zinc-binding sites of the
prototypical alcohol dehydrogenases of this group.
Alcohol dehydrogenase in the liver converts ethanol and
NAD+ to acetaldehyde and NADH, while in yeast and some
other microorganisms ADH catalyzes the conversion
acetaldehyde to ethanol in alcoholic fermentation. ADH
is a member of the medium chain alcohol dehydrogenase
family (MDR), which has a NAD(P)(H)-binding domain in a
Rossmann fold of a beta-alpha form. The NAD(H)-binding
region is comprised of 2 structurally similar halves,
each of which contacts a mononucleotide. The N-terminal
catalytic domain has a distant homology to GroES. These
proteins typically form dimers (typically higher plants,
mammals) or tetramers (yeast, bacteria), and have 2
tightly bound zinc atoms per subunit, a catalytic zinc
at the active site and a structural zinc in a lobe of
the catalytic domain. NAD(H) binding occurs in the cleft
between the catalytic and coenzyme-binding domains at
the active site, and coenzyme binding induces a
conformational closing of this cleft. Coenzyme binding
typically precedes and contributes to substrate binding.
In human ADH catalysis, the zinc ion helps coordinate
the alcohol, followed by deprotonation of a histidine,
the ribose of NAD, a serine, then the alcohol, which
allows the transfer of a hydride to NAD+, creating NADH
and a zinc-bound aldehyde or ketone. In yeast and some
bacteria, the active site zinc binds an aldehyde,
polarizing it, and leading to the reverse reaction.
Length = 336
Score = 24.8 bits (55), Expect = 6.1
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 4/21 (19%)
Query: 34 AEAIREAHAVDQSLLEGGKTK 54
AE +REAHA LLE GKT
Sbjct: 314 AENLREAHA----LLESGKTI 330
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional.
Length = 502
Score = 24.6 bits (53), Expect = 7.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 4 KVTSEQVVRAYILRCRDVNPYLNA-----IVEERYAEAIREAHAVDQSLLEGGKTKEELA 58
++ EQ + L +DVN YL ++E+ + E I + + + GG +K+E+
Sbjct: 402 NMSLEQKKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRNVYGGPSKKEME 461
Query: 59 R 59
R
Sbjct: 462 R 462
>gnl|CDD|183400 PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.
Length = 333
Score = 24.4 bits (54), Expect = 8.4
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 24 YLNAIVE-------ERYAEAIREAHAVDQSLLEGGKTKEELARDT 61
YL +++ ER AE ++ V + L G + E+A T
Sbjct: 275 YLEEVLQELLAPIRERRAEFAKDPGYVLEILKAGSEKAREVAAQT 319
>gnl|CDD|215478 PLN02886, PLN02886, aminoacyl-tRNA ligase.
Length = 389
Score = 24.4 bits (53), Expect = 9.6
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 16/68 (23%)
Query: 6 TSEQVVRAYILRCRDVN-----PYL-NAIVEE------RYAEAIREAHAVDQSLLEGGKT 53
T E+V+ C D+ P L +A++E RY E + + +D L EG
Sbjct: 311 TKEEVLAE----CGDMRWGDFKPLLTDALIEHLSPIQVRYEEIMSDPSYLDSVLKEGADA 366
Query: 54 KEELARDT 61
E+A T
Sbjct: 367 AAEIADRT 374
>gnl|CDD|226247 COG3724, AstB, Succinylarginine dihydrolase [Amino acid transport
and metabolism].
Length = 442
Score = 24.4 bits (53), Expect = 9.9
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 25 LNAIVEERYAEAIREAHAVDQSLLEGGKTKEELARDTPLLGVP 67
LN V+ Y + + A D LL G +E L T +L +
Sbjct: 394 LNDWVDRYYRDRLTAADLADPQLLREG--REALDELTQILNLG 434
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.136 0.371
Gapped
Lambda K H
0.267 0.0733 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 4,362,483
Number of extensions: 363937
Number of successful extensions: 435
Number of sequences better than 10.0: 1
Number of HSP's gapped: 427
Number of HSP's successfully gapped: 43
Length of query: 84
Length of database: 10,937,602
Length adjustment: 52
Effective length of query: 32
Effective length of database: 8,631,194
Effective search space: 276198208
Effective search space used: 276198208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.2 bits)