Query psy17001
Match_columns 295
No_of_seqs 106 out of 125
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 19:15:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17001.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17001hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h54a1 a.102.1.4 (A:269-753) 20.8 33 0.0024 30.0 3.7 51 110-168 433-483 (485)
2 d1fhga_ b.1.1.4 (A:) Telokin { 17.8 32 0.0024 23.3 2.4 11 62-72 78-88 (102)
3 d1d0gr3 g.24.1.1 (R:102-128) D 16.4 23 0.0017 20.1 0.9 10 189-198 2-11 (27)
4 d1rhfa2 b.1.1.4 (A:98-182) Tyr 15.4 1.1E+02 0.0082 20.0 4.8 72 4-91 2-85 (85)
5 d1zsqa2 c.45.1.3 (A:199-585) M 15.3 13 0.00096 33.5 -0.5 11 36-46 237-247 (387)
6 d2gu2a1 c.56.5.7 (A:4-310) Asp 12.2 57 0.0041 28.1 2.8 51 35-94 253-305 (307)
7 d1ueba3 b.40.4.5 (A:127-184) E 11.9 44 0.0032 22.3 1.5 22 145-166 31-56 (58)
8 d3pmga4 d.129.2.1 (A:421-561) 10.7 1.4E+02 0.0098 23.1 4.4 32 116-156 59-93 (141)
9 d1kfia4 d.129.2.1 (A:444-572) 10.2 1.2E+02 0.0091 23.0 3.9 32 116-156 49-83 (129)
10 d1w8ia_ c.120.1.1 (A:) Hypothe 9.2 26 0.0019 26.5 -0.5 24 36-60 114-138 (155)
No 1
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}
Probab=20.78 E-value=33 Score=30.02 Aligned_cols=51 Identities=10% Similarity=0.134 Sum_probs=38.0
Q ss_pred CCceeEecCceecccCCCCeeeEEEEecCCCCeeeEEEEEeeeccEEEEeecCCcceee
Q psy17001 110 PLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKYIETTIVVRRVGKYLAVS 168 (295)
Q Consensus 110 ~LP~~F~dgs~~~~~~~G~~~~L~v~~~~~~~~~~VeI~~~yigt~~~Vr~~G~~Ls~s 168 (295)
-||..+.++++. +.-.|. .+.|.++. . +|+|.+. +|.-|.|+-.|.-+..+
T Consensus 433 alP~~W~~~~~~-~~~rG~--~~~i~v~~--~--~~~~~~~-~g~p~~v~~~G~~~~~~ 483 (485)
T d1h54a1 433 FLPKTWTSYTFR-QVFRDR--LIEVSVHA--D--GPHFKLL-SGEPLTIDVAGAAAAAA 483 (485)
T ss_dssp CCCTTCSEEEEE-EEETTE--EEEEEEET--T--EEEEEEE-ESSCEEEEETTEEEEEC
T ss_pred CCCCCCCccEEE-EEECCe--EEEEEEEC--C--eEEEEEc-cCCeEEEEECCEEEEec
Confidence 499999888886 444465 57777663 3 7999987 89999999888776553
No 2
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}
Probab=17.79 E-value=32 Score=23.33 Aligned_cols=11 Identities=18% Similarity=0.205 Sum_probs=7.0
Q ss_pred CCeEEEEEeec
Q psy17001 62 PYLGVQVTNEL 72 (295)
Q Consensus 62 ~~lsVQvtN~p 72 (295)
+.+..+|+|..
T Consensus 78 G~Y~C~a~N~~ 88 (102)
T d1fhga_ 78 AKYTCKAVNSL 88 (102)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEEECC
Confidence 34677777765
No 3
>d1d0gr3 g.24.1.1 (R:102-128) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.40 E-value=23 Score=20.14 Aligned_cols=10 Identities=40% Similarity=1.039 Sum_probs=7.7
Q ss_pred cccCCCCCcc
Q psy17001 189 CTLGCPPSER 198 (295)
Q Consensus 189 C~~gCp~~e~ 198 (295)
|..|||.+..
T Consensus 2 c~tgcprg~v 11 (27)
T d1d0gr3 2 CRTGCPRGMV 11 (27)
T ss_dssp CCSSCCTTCE
T ss_pred cccCCCCcce
Confidence 8889997653
No 4
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.40 E-value=1.1e+02 Score=20.01 Aligned_cols=72 Identities=17% Similarity=0.279 Sum_probs=35.1
Q ss_pred cceecCCCCCCCCCCCCcccCCCCcceeeeeecCC---ccccc-cCCc--------eeEEEeeeeecccCCCeEEEEEee
Q psy17001 4 PVITSTPEPPPTLPPASCSFHGTRRFKHCGLFGDP---HLKTF-NNDY--------QTCRVRGAWPLIDNPYLGVQVTNE 71 (295)
Q Consensus 4 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~C~~FGDP---H~rTF-dG~f--------qTC~~~Ga~pLi~n~~lsVQvtN~ 71 (295)
|.|+..|+.-.. .++..--..|.+-|+| .++=| ||.. .+-.... +-|.+.++-.|+|.
T Consensus 2 P~f~~~P~~~~v-------~~G~~~~l~C~~~g~P~P~~i~W~k~g~~i~~~~~~~~~l~~~~---~~d~G~Y~C~A~N~ 71 (85)
T d1rhfa2 2 PFFTVEPKDLAV-------PPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTG---VTQSTMFSCEAHNL 71 (85)
T ss_dssp CEEEECCCCEEE-------CTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECC---CSSCEEEEEEEEET
T ss_pred CcEEEeCCcEEE-------cCCCEEEEEEEEecCCcceEEEEEECCEECCCCCCcceEEecCC---ccccEEEEEEEEcC
Confidence 666666543222 2233455678888875 24344 3321 1111111 22445578888886
Q ss_pred cccCCCceeeeceEEEEEEc
Q psy17001 72 LIREGSPATVTTKKVTVIIK 91 (295)
Q Consensus 72 p~~~Gs~ata~t~kvTVivk 91 (295)
. | .+.++.++|.||
T Consensus 72 ~---G---~~~S~~~~v~Vk 85 (85)
T d1rhfa2 72 K---G---LASSRTATVHLQ 85 (85)
T ss_dssp T---E---EEECCCEEEEEC
T ss_pred C---C---cEEEEEEEEEEC
Confidence 5 4 233335666654
No 5
>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.32 E-value=13 Score=33.48 Aligned_cols=11 Identities=18% Similarity=-0.031 Sum_probs=7.9
Q ss_pred cCCccccccCC
Q psy17001 36 GDPHLKTFNND 46 (295)
Q Consensus 36 GDPH~rTFdG~ 46 (295)
=||||||++|.
T Consensus 237 lDpyyRTi~GF 247 (387)
T d1zsqa2 237 LDGYYRTIRGF 247 (387)
T ss_dssp HCGGGGSHHHH
T ss_pred hCcccccHHHH
Confidence 37788888773
No 6
>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=12.15 E-value=57 Score=28.06 Aligned_cols=51 Identities=22% Similarity=0.204 Sum_probs=33.2
Q ss_pred ecCCccccccCCceeEEE-eeeeecccCCCeEEEEEeeccc-CCCceeeeceEEEEEEcCCc
Q psy17001 35 FGDPHLKTFNNDYQTCRV-RGAWPLIDNPYLGVQVTNELIR-EGSPATVTTKKVTVIIKGRS 94 (295)
Q Consensus 35 FGDPH~rTFdG~fqTC~~-~Ga~pLi~n~~lsVQvtN~p~~-~Gs~ata~t~kvTVivk~~~ 94 (295)
=|||=|.||||+--+..+ ..-||+.=|+ ..- +-.-|-+.|+|.+|.++..+
T Consensus 253 ~GdplF~~~dG~~i~~~g~~~vyPvFiNE---------aAY~ek~iA~~~t~k~~~~~~~~~ 305 (307)
T d2gu2a1 253 PGDPVFVSLDGKVIPLGGDCTVYPVFVNE---------AAYYEKKEAFAKTTKLTLNAKSIR 305 (307)
T ss_dssp TTSEEEECTTCCEEECCSSSCBEEESTTC---------GGGTTTTCSEEEEEEEEEEECCEE
T ss_pred CCCceEecCCCCEEEecCCCceEEEeccH---------HHHHhhhhhhhhheeEEEechhcc
Confidence 499999999998443333 3457765552 211 12356777889999988654
No 7
>d1ueba3 b.40.4.5 (A:127-184) Elongation factor P middle and C-terminal domains {Thermus thermophilus HB8 [TaxId: 300852]}
Probab=11.90 E-value=44 Score=22.26 Aligned_cols=22 Identities=27% Similarity=0.588 Sum_probs=16.5
Q ss_pred EEEEEe-ee--ccEEEEe-ecCCcce
Q psy17001 145 AEIFIK-YI--ETTIVVR-RVGKYLA 166 (295)
Q Consensus 145 VeI~~~-yi--gt~~~Vr-~~G~~Ls 166 (295)
++|++| || |-.|.|. +.|.|++
T Consensus 31 ~~i~VP~FI~~Gd~I~VdT~~g~Y~~ 56 (58)
T d1ueba3 31 AVVQVPLFVEPGEVIKVDTRTGEYVG 56 (58)
T ss_dssp CEEEEETTCCTTCEEEEETTTTEEEE
T ss_pred CEEEcCCcccCCCEEEEECCCCeEec
Confidence 789999 77 6777777 7777764
No 8
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=10.69 E-value=1.4e+02 Score=23.08 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=19.1
Q ss_pred ecCceecccCCCCeeeEEEEecCCCCeeeEEEEEe---eeccEE
Q psy17001 116 INSGVNSHSKNADNVVLKVESDPSGHHERAEIFIK---YIETTI 156 (295)
Q Consensus 116 ~dgs~~~~~~~G~~~~L~v~~~~~~~~~~VeI~~~---yigt~~ 156 (295)
+|||+...+ ||+|...+ |+ .+-++++ -.|+||
T Consensus 59 VDgSvs~~Q------GlRi~F~d-Gs--RiVfRLSGTGs~GATi 93 (141)
T d3pmga4 59 VDGSVSKNQ------GLRLIFAD-GS--RIIFRLSGTGSAGATI 93 (141)
T ss_dssp TTCCEECCC------CEEEEETT-SC--EEEEEEEECSSSCEEE
T ss_pred CCCccccCC------cEEEEEcC-CC--EEEEEecCCCCCCcEE
Confidence 456776666 56676664 43 5666666 346666
No 9
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=10.15 E-value=1.2e+02 Score=22.97 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=20.0
Q ss_pred ecCceecccCCCCeeeEEEEecCCCCeeeEEEEEe---eeccEE
Q psy17001 116 INSGVNSHSKNADNVVLKVESDPSGHHERAEIFIK---YIETTI 156 (295)
Q Consensus 116 ~dgs~~~~~~~G~~~~L~v~~~~~~~~~~VeI~~~---yigt~~ 156 (295)
+|||+...+ ||+|...+ |+ .+-++++ -.|+||
T Consensus 49 VDgSvs~~Q------GlRi~F~d-Gs--RiVfRLSGTGs~GATi 83 (129)
T d1kfia4 49 VDQSVSKNQ------GVRFVFGD-GS--RIIFRLSGTGSVGATI 83 (129)
T ss_dssp TTCCEECCC------CEEEECTT-SC--EEEEEECSSCSSSEEE
T ss_pred CCCccccCC------ceEEEEcC-CC--EEEEEecCCCCCCcEE
Confidence 567777766 57777664 43 5666666 346666
No 10
>d1w8ia_ c.120.1.1 (A:) Hypothetical protein AF1683 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=9.22 E-value=26 Score=26.50 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=19.4
Q ss_pred cCCccccccCCce-eEEEeeeeeccc
Q psy17001 36 GDPHLKTFNNDYQ-TCRVRGAWPLID 60 (295)
Q Consensus 36 GDPH~rTFdG~fq-TC~~~Ga~pLi~ 60 (295)
|-| +.|||.+|. ||.|.-=|+-+|
T Consensus 114 ~i~-i~TfD~~F~~~~~~~~~~~~~~ 138 (155)
T d1w8ia_ 114 KLK-LISYDSRFSLPTIGRDYWKSLD 138 (155)
T ss_dssp TCE-EECSCTTCSSCEECTTTTTTSC
T ss_pred CCC-EEEecCCcchhhhhhhhccchH
Confidence 555 779999999 999987777655
Done!