Your job contains 1 sequence.
>psy17001
AVRPVITSTPEPPPTLPPASCSFHGTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLID
NPYLGVQVTNELIREGSPATVTTKKVTVIIKGRSTPCTNEKTYEAQADSPLPLSFINSGV
NSHSKNADNVVLKVESDPSGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSI
QDPNTLQLCTLGCPPSERLDIVTSRGHMTDRDHALAKCKDTEELSNDIINNLTDYYLDWC
VFDTMTAGISYDFTAAAHSAQADVLRFDPSSLNNRTTLYLTEPVNVPDNTNWSES
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17001
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J3KNF6 - symbol:RGMB "RGM domain family member ... 419 2.9e-39 1
UNIPROTKB|Q6NW40 - symbol:RGMB "RGM domain family member ... 419 2.9e-39 1
UNIPROTKB|F1SA76 - symbol:RGMA "Uncharacterized protein" ... 414 9.9e-39 1
ZFIN|ZDB-GENE-040527-1 - symbol:rgma "RGM domain family, ... 410 2.6e-38 1
UNIPROTKB|F5GZU6 - symbol:RGMA "Repulsive guidance molecu... 403 1.5e-37 1
UNIPROTKB|F5H7G2 - symbol:RGMA "Repulsive guidance molecu... 403 1.5e-37 1
UNIPROTKB|G3V518 - symbol:RGMA "Repulsive guidance molecu... 403 1.5e-37 1
UNIPROTKB|Q96B86 - symbol:RGMA "Repulsive guidance molecu... 403 1.5e-37 1
UNIPROTKB|F1NHA2 - symbol:RGMA "Repulsive guidance molecu... 401 2.4e-37 1
UNIPROTKB|Q8JG54 - symbol:RGMA "Repulsive guidance molecu... 401 2.4e-37 1
MGI|MGI:2679262 - symbol:Rgma "RGM domain family, member ... 400 3.0e-37 1
RGD|1311983 - symbol:Rgma "RGM domain family, member A" s... 400 3.0e-37 1
UNIPROTKB|D4A188 - symbol:Rgma "Protein Rgma" species:101... 400 3.0e-37 1
UNIPROTKB|E1BFA9 - symbol:RGMA "Uncharacterized protein" ... 397 6.3e-37 1
MGI|MGI:1916049 - symbol:Rgmb "RGM domain family, member ... 386 9.2e-36 1
UNIPROTKB|F1NNI0 - symbol:RGMB "Uncharacterized protein" ... 380 4.0e-35 1
UNIPROTKB|F1MFY9 - symbol:RGMB "Uncharacterized protein" ... 379 5.1e-35 1
ZFIN|ZDB-GENE-040527-2 - symbol:rgmb "RGM domain family, ... 365 1.5e-33 1
ZFIN|ZDB-GENE-030131-561 - symbol:rgmd "RGM domain family... 351 4.7e-32 1
UNIPROTKB|E1BI30 - symbol:HFE2 "Uncharacterized protein" ... 339 8.8e-31 1
RGD|1310195 - symbol:Hfe2 "hemochromatosis type 2 (juveni... 337 1.4e-30 1
UNIPROTKB|F1LRU6 - symbol:Hfe2 "Hemojuvelin" species:1011... 337 1.4e-30 1
UNIPROTKB|Q6ZVN8 - symbol:HFE2 "Hemojuvelin" species:9606... 334 3.0e-30 1
MGI|MGI:1916835 - symbol:Hfe2 "hemochromatosis type 2 (ju... 328 1.3e-29 1
ZFIN|ZDB-GENE-030131-651 - symbol:hfe2 "hemochromatosis t... 315 3.1e-28 1
WB|WBGene00022154 - symbol:drag-1 species:6239 "Caenorhab... 267 5.2e-23 1
UNIPROTKB|F1SDF6 - symbol:HFE2 "Uncharacterized protein" ... 188 1.0e-21 2
>UNIPROTKB|J3KNF6 [details] [associations]
symbol:RGMB "RGM domain family member B" species:9606 "Homo
sapiens" [GO:0005793 "endoplasmic reticulum-Golgi intermediate
compartment" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA] KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AC008522 RefSeq:NP_001012779.2 UniGene:Hs.526902 GeneID:285704
KEGG:hsa:285704 CTD:285704 HGNC:HGNC:26896 ChiTaRS:RGMB OMA:VRALWIS
ProteinModelPortal:J3KNF6 Ensembl:ENST00000308234 Uniprot:J3KNF6
Length = 478
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 100/247 (40%), Positives = 138/247 (55%)
Query: 32 CGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXXXXX 91
CGLFGDPHL+TF +++QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 204 CGLFGDPHLRTFKDNFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKITIIFKA 263
Query: 92 GRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKY 151
CT++K Y+A D LP +F++ G S ++D L++ SGH+ E+ +Y
Sbjct: 264 HHE--CTDQKVYQAVTDD-LPAAFVD-GTTSGG-DSDAKSLRIVERESGHY--VEMHARY 316
Query: 152 IETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLD-----IVTSRG 206
I TT+ VR+VG+YL ++ ++PE+L S ++ LQLC GCP SER+D + G
Sbjct: 317 IGTTVFVRQVGRYLTLAIRMPEDLAM-SYEESQDLQLCVNGCPLSERIDDGQGQVSAILG 375
Query: 207 HMTDRDHALAKCKD-TEELSNDIINN---LTDYYLDWCVFDTMTAGISYDFTAAAHSAQA 262
H R + T E +N + + D Y CVFD +T G + +FTAAAHSA
Sbjct: 376 HSLPRTSLVQAWPGYTLETANTQCHEKMPVKDIYFQSCVFDLLTTGDA-NFTAAAHSALE 434
Query: 263 DVLRFDP 269
DV P
Sbjct: 435 DVEALHP 441
>UNIPROTKB|Q6NW40 [details] [associations]
symbol:RGMB "RGM domain family member B" species:9606 "Homo
sapiens" [GO:0045121 "membrane raft" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0042802
"identical protein binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0046658 "anchored to
plasma membrane" evidence=ISS] [GO:0007411 "axon guidance"
evidence=TAS] Reactome:REACT_111045 GO:GO:0007411 GO:GO:0045893
GO:GO:0007155 GO:GO:0045121 GO:GO:0042802 GO:GO:0030509
GO:GO:0005793 GO:GO:0046658 Pathway_Interaction_DB:bmppathway
eggNOG:NOG87951 HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AK074887 EMBL:AC008522 EMBL:BC067736 IPI:IPI00963921
RefSeq:NP_001012779.2 UniGene:Hs.526902 STRING:Q6NW40 DMDM:51316243
PRIDE:Q6NW40 Ensembl:ENST00000513185 GeneID:285704 KEGG:hsa:285704
UCSC:uc003knc.3 CTD:285704 GeneCards:GC05P098132 H-InvDB:HIX0005059
HGNC:HGNC:26896 HPA:HPA016993 MIM:612687 neXtProt:NX_Q6NW40
PharmGKB:PA134868641 InParanoid:Q6NW40 OrthoDB:EOG4GHZNX
ChiTaRS:RGMB GenomeRNAi:285704 NextBio:95719 Bgee:Q6NW40
CleanEx:HS_RGMB Genevestigator:Q6NW40 GermOnline:ENSG00000174136
Uniprot:Q6NW40
Length = 437
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 100/247 (40%), Positives = 138/247 (55%)
Query: 32 CGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXXXXX 91
CGLFGDPHL+TF +++QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 163 CGLFGDPHLRTFKDNFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKITIIFKA 222
Query: 92 GRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKY 151
CT++K Y+A D LP +F++ G S ++D L++ SGH+ E+ +Y
Sbjct: 223 HHE--CTDQKVYQAVTDD-LPAAFVD-GTTSGG-DSDAKSLRIVERESGHY--VEMHARY 275
Query: 152 IETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLD-----IVTSRG 206
I TT+ VR+VG+YL ++ ++PE+L S ++ LQLC GCP SER+D + G
Sbjct: 276 IGTTVFVRQVGRYLTLAIRMPEDLAM-SYEESQDLQLCVNGCPLSERIDDGQGQVSAILG 334
Query: 207 HMTDRDHALAKCKD-TEELSNDIINN---LTDYYLDWCVFDTMTAGISYDFTAAAHSAQA 262
H R + T E +N + + D Y CVFD +T G + +FTAAAHSA
Sbjct: 335 HSLPRTSLVQAWPGYTLETANTQCHEKMPVKDIYFQSCVFDLLTTGDA-NFTAAAHSALE 393
Query: 263 DVLRFDP 269
DV P
Sbjct: 394 DVEALHP 400
>UNIPROTKB|F1SA76 [details] [associations]
symbol:RGMA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0015026 "coreceptor activity" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 GO:GO:0001843
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:PGDSQER EMBL:CT841546
EMBL:CT954235 Ensembl:ENSSSCT00000002525 Uniprot:F1SA76
Length = 435
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 107/283 (37%), Positives = 147/283 (51%)
Query: 22 SFHGTR---RFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 132 SFHNRAAAPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 191
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F + N K+ N LK+
Sbjct: 192 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFADGSKNGGDKHGANS-LKITEKV 247
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 248 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 304
Query: 197 ERLDIVTSRGHM----TDRDHALA---KCKDTEELSNDIIN-----NLTDYYLDWCVFDT 244
+++D RG T R A + DT + + D Y CVFD
Sbjct: 305 QQIDFQAFRGSAEGPGTRRPAAASPAPSAPDTFPYETAVAKCKEKLPVEDLYYQACVFDL 364
Query: 245 MTAGISYDFTAAAHSAQADVLRFDPSSLNNRTTLYLTEPVNVP 287
+T G +FT AA+ A DV +N+ L+L E P
Sbjct: 365 LTTG-DVNFTLAAYYALEDVKMLH----SNKDKLHLYERTREP 402
>ZFIN|ZDB-GENE-040527-1 [details] [associations]
symbol:rgma "RGM domain family, member A"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0046658 "anchored to plasma membrane" evidence=ISS]
ZFIN:ZDB-GENE-040527-1 GO:GO:0046658 EMBL:BX649578 CTD:56963
HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:PGDSQER IPI:IPI00616991
RefSeq:NP_001038476.1 UniGene:Dr.77274 Ensembl:ENSDART00000008638
GeneID:414272 KEGG:dre:414272 InParanoid:Q1LVM8 NextBio:20818682
Uniprot:Q1LVM8
Length = 449
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 103/254 (40%), Positives = 135/254 (53%)
Query: 29 FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXX 88
+ HCG FGDPHL+TFN+D+QTC+V GAWPLI N YL VQVTN + GS A
Sbjct: 161 YTHCGFFGDPHLRTFNDDFQTCKVEGAWPLIHNKYLSVQVTNTPVVVGSSATATSKLTII 220
Query: 89 XXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIF 148
+ C ++KTY A+ + LP +FI+ N + N + VE P G H EI
Sbjct: 221 FNSFQE--CVDQKTYRAETED-LPAAFIDGSKNGGEGHGANTLRVVEKVP-GQH--VEIQ 274
Query: 149 IKYIETTIVVRRVGKYLAVSAKLPEELVEP-SIQDPNTLQLCTLGCPPSERLDIVT---- 203
+YI TTIVVR+VG YL + ++PEE+V QD L LC GCP ++R+D T
Sbjct: 275 ARYIGTTIVVRKVGHYLTFAVRMPEEVVNSVEDQDNQDLYLCLHGCPANQRIDFRTFKAR 334
Query: 204 -------SRGHMTDRDH------ALAKCKDTEELSNDIINNLTDYYLDWCVFDTMTAGIS 250
RG + H A+AKCK E L + D Y CVFD +++G
Sbjct: 335 AAESHGVGRGRPGNPSHGFTYQSAMAKCK--ERLP------VEDLYFQSCVFDLLSSG-D 385
Query: 251 YDFTAAAHSAQADV 264
+FT AA+ A DV
Sbjct: 386 INFTLAAYYAFEDV 399
>UNIPROTKB|F5GZU6 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9606
"Homo sapiens" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0015026 "coreceptor
activity" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 GO:GO:0001843
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AC087641 HGNC:HGNC:30308 ChiTaRS:RGMA IPI:IPI00816347
IPI:IPI00952943 Ensembl:ENST00000425933 Ensembl:ENST00000542321
Ensembl:ENST00000543599 Uniprot:F5GZU6
Length = 434
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 105/268 (39%), Positives = 145/268 (54%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH T + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 134 SFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 193
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F++ N K+ N LK+
Sbjct: 194 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFVDGSKNGGDKHGANS-LKITEKV 249
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 250 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDWDSQGLYLCLRGCPLN 306
Query: 197 ERLDI----VTSRGHMTDR----------------DHALAKCKDTEELSNDIINNLTDYY 236
+++D + G R + A+AKCK E+L + D Y
Sbjct: 307 QQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCK--EKLP------VEDLY 358
Query: 237 LDWCVFDTMTAGISYDFTAAAHSAQADV 264
CVFD +T G +FT AA+ A DV
Sbjct: 359 YQACVFDLLTTG-DVNFTLAAYYALEDV 385
>UNIPROTKB|F5H7G2 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9606
"Homo sapiens" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0015026 "coreceptor
activity" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 GO:GO:0001843
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AC087641 HGNC:HGNC:30308 ChiTaRS:RGMA IPI:IPI01009646
Ensembl:ENST00000538818 Ensembl:ENST00000556658 Uniprot:F5H7G2
Length = 341
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 105/268 (39%), Positives = 145/268 (54%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH T + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 41 SFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 100
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F++ N K+ N LK+
Sbjct: 101 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFVDGSKNGGDKHGANS-LKITEKV 156
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 157 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDWDSQGLYLCLRGCPLN 213
Query: 197 ERLDI----VTSRGHMTDR----------------DHALAKCKDTEELSNDIINNLTDYY 236
+++D + G R + A+AKCK E+L + D Y
Sbjct: 214 QQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCK--EKLP------VEDLY 265
Query: 237 LDWCVFDTMTAGISYDFTAAAHSAQADV 264
CVFD +T G +FT AA+ A DV
Sbjct: 266 YQACVFDLLTTG-DVNFTLAAYYALEDV 292
>UNIPROTKB|G3V518 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9606
"Homo sapiens" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0015026 "coreceptor
activity" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 GO:GO:0001843
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AC087641 HGNC:HGNC:30308 ChiTaRS:RGMA OMA:PGDSQER
Ensembl:ENST00000557301 ArrayExpress:G3V518 Bgee:G3V518
Uniprot:G3V518
Length = 458
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 105/268 (39%), Positives = 145/268 (54%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH T + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 158 SFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 217
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F++ N K+ N LK+
Sbjct: 218 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFVDGSKNGGDKHGANS-LKITEKV 273
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 274 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDWDSQGLYLCLRGCPLN 330
Query: 197 ERLDI----VTSRGHMTDR----------------DHALAKCKDTEELSNDIINNLTDYY 236
+++D + G R + A+AKCK E+L + D Y
Sbjct: 331 QQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCK--EKLP------VEDLY 382
Query: 237 LDWCVFDTMTAGISYDFTAAAHSAQADV 264
CVFD +T G +FT AA+ A DV
Sbjct: 383 YQACVFDLLTTG-DVNFTLAAYYALEDV 409
>UNIPROTKB|Q96B86 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9606
"Homo sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] GO:GO:0005783 GO:GO:0005886 Reactome:REACT_111045
GO:GO:0007411 GO:GO:0031225 EMBL:CH471101
Pathway_Interaction_DB:bmppathway CTD:56963 eggNOG:NOG87951
HOVERGEN:HBG057627 KO:K06847 OrthoDB:EOG4001JB InterPro:IPR009496
InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535 EMBL:AL136826
EMBL:AK074910 EMBL:AK074966 EMBL:AK074980 EMBL:AC087641
EMBL:BC015886 EMBL:BC140838 EMBL:BC151132 EMBL:AL390083
IPI:IPI00015049 IPI:IPI00478417 RefSeq:NP_001159758.1
RefSeq:NP_001159759.1 RefSeq:NP_001159760.1 RefSeq:NP_001159761.1
RefSeq:NP_064596.2 UniGene:Hs.271277 ProteinModelPortal:Q96B86
IntAct:Q96B86 MINT:MINT-1420050 STRING:Q96B86 PhosphoSite:Q96B86
DMDM:296452979 PRIDE:Q96B86 DNASU:56963 Ensembl:ENST00000329082
GeneID:56963 KEGG:hsa:56963 UCSC:uc002bsq.2 GeneCards:GC15M093586
HGNC:HGNC:30308 HPA:CAB012343 MIM:607362 neXtProt:NX_Q96B86
PharmGKB:PA128394693 InParanoid:Q96B86 ChiTaRS:RGMA
GenomeRNAi:56963 NextBio:62595 ArrayExpress:Q96B86 Bgee:Q96B86
CleanEx:HS_RGMA Genevestigator:Q96B86 GermOnline:ENSG00000182175
Uniprot:Q96B86
Length = 450
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 105/268 (39%), Positives = 145/268 (54%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH T + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 150 SFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 209
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F++ N K+ N LK+
Sbjct: 210 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFVDGSKNGGDKHGANS-LKITEKV 265
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 266 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDWDSQGLYLCLRGCPLN 322
Query: 197 ERLDI----VTSRGHMTDR----------------DHALAKCKDTEELSNDIINNLTDYY 236
+++D + G R + A+AKCK E+L + D Y
Sbjct: 323 QQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCK--EKLP------VEDLY 374
Query: 237 LDWCVFDTMTAGISYDFTAAAHSAQADV 264
CVFD +T G +FT AA+ A DV
Sbjct: 375 YQACVFDLLTTG-DVNFTLAAYYALEDV 401
>UNIPROTKB|F1NHA2 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9031
"Gallus gallus" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0015026 "coreceptor
activity" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 IPI:IPI00595846
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:PGDSQER EMBL:AADN02041465
Ensembl:ENSGALT00000011285 Uniprot:F1NHA2
Length = 407
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 108/291 (37%), Positives = 148/291 (50%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 106 SFHKHSAAPNYTHCGLFGDPHLRTFTDTFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSS 165
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C +K Y+A+ D LP +F + N K+ N LK+
Sbjct: 166 ATATSKLTIIFKSFQE--CVEQKVYQAEMDE-LPAAFADGSKNGGDKHGANS-LKITEKV 221
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 222 SGQH--IEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 278
Query: 197 ERLDIVTSR------GHMTDRDHALAKCKDT---EELSNDIINNLT--DYYLDWCVFDTM 245
+++D T R G + +L + E + L D Y CVFD +
Sbjct: 279 QQIDFQTFRLAQAAEGRARRKGPSLPAPPEAFTYESATAKCREKLPVEDLYFQSCVFDLL 338
Query: 246 TAGISYDFTAAAHSAQADVLRFDPSSLNNRTTLYLTEPVNV--PDNTNWSE 294
T G +F AA+ A DV +N+ L+L E P N SE
Sbjct: 339 TTG-DVNFMLAAYYAFEDVKMLH----SNKDKLHLYERTRALAPGNAAPSE 384
>UNIPROTKB|Q8JG54 [details] [associations]
symbol:RGMA "Repulsive guidance molecule A" species:9031
"Gallus gallus" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0015026 "coreceptor activity"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=TAS] GO:GO:0005886
GO:GO:0009986 GO:GO:0031225 GO:GO:0030510 Reactome:REACT_115433
EMBL:AY128507 IPI:IPI00595846 RefSeq:NP_989868.1 UniGene:Gga.117
STRING:Q8JG54 GeneID:395214 KEGG:gga:395214 CTD:56963
eggNOG:NOG87951 HOGENOM:HOG000013072 HOVERGEN:HBG057627
InParanoid:Q8JG54 KO:K06847 OrthoDB:EOG4001JB NextBio:20815303
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
Uniprot:Q8JG54
Length = 432
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 108/291 (37%), Positives = 148/291 (50%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 131 SFHKHSAAPNYTHCGLFGDPHLRTFTDTFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSS 190
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C +K Y+A+ D LP +F + N K+ N LK+
Sbjct: 191 ATATSKLTIIFKSFQE--CVEQKVYQAEMDE-LPAAFADGSKNGGDKHGANS-LKITEKV 246
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 247 SGQH--IEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 303
Query: 197 ERLDIVTSR------GHMTDRDHALAKCKDT---EELSNDIINNLT--DYYLDWCVFDTM 245
+++D T R G + +L + E + L D Y CVFD +
Sbjct: 304 QQIDFQTFRLAQAAEGRARRKGPSLPAPPEAFTYESATAKCREKLPVEDLYFQSCVFDLL 363
Query: 246 TAGISYDFTAAAHSAQADVLRFDPSSLNNRTTLYLTEPVNV--PDNTNWSE 294
T G +F AA+ A DV +N+ L+L E P N SE
Sbjct: 364 TTG-DVNFMLAAYYAFEDVKMLH----SNKDKLHLYERTRALAPGNAAPSE 409
>MGI|MGI:2679262 [details] [associations]
symbol:Rgma "RGM domain family, member A" species:10090 "Mus
musculus" [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0015026 "coreceptor activity"
evidence=IGI] [GO:0016020 "membrane" evidence=IEA] [GO:0030509 "BMP
signaling pathway" evidence=IGI] [GO:0030510 "regulation of BMP
signaling pathway" evidence=ISO;IMP;IDA] [GO:0031225 "anchored to
membrane" evidence=IEA] MGI:MGI:2679262 GO:GO:0005886 GO:GO:0009986
GO:GO:0031225 GO:GO:0030509 GO:GO:0030510 GO:GO:0001843
GO:GO:0001934 GO:GO:0015026 CTD:56963 eggNOG:NOG87951
HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847 OrthoDB:EOG4001JB
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AJ557513 EMBL:BC023870 EMBL:BC059072 IPI:IPI00453947
IPI:IPI00462622 RefSeq:NP_808408.2 UniGene:Mm.333943 STRING:Q6PCX7
PhosphoSite:Q6PCX7 PRIDE:Q6PCX7 Ensembl:ENSMUST00000094312
GeneID:244058 KEGG:mmu:244058 UCSC:uc009hra.2 UCSC:uc009hrb.2
GeneTree:ENSGT00390000008488 InParanoid:Q6PCX7 OMA:PGDSQER
NextBio:386094 Bgee:Q6PCX7 CleanEx:MM_RGMA Genevestigator:Q6PCX7
GermOnline:ENSMUSG00000070509 Uniprot:Q6PCX7
Length = 454
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 99/257 (38%), Positives = 138/257 (53%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 151 SFHKHSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 210
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F + N K+ N LK+
Sbjct: 211 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPSAFADGSKNGGDKHGANS-LKITEKV 266
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 267 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 323
Query: 197 ERLDIVTSRGHM-TDRDHALAK----CKDTEELSNDIIN-----NLTDYYLDWCVFDTMT 246
+++D R + + R A A +T + + D Y CVFD +T
Sbjct: 324 QQIDFQAFRANAESPRRPAAASPSPVVPETFPYETAVAKCKEKLPVEDLYYQACVFDLLT 383
Query: 247 AGISYDFTAAAHSAQAD 263
G +FT AA+ A D
Sbjct: 384 TG-DVNFTLAAYYALED 399
>RGD|1311983 [details] [associations]
symbol:Rgma "RGM domain family, member A" species:10116 "Rattus
norvegicus" [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0009986 "cell
surface" evidence=ISO] [GO:0015026 "coreceptor activity"
evidence=ISO] [GO:0030509 "BMP signaling pathway" evidence=ISO]
[GO:0030510 "regulation of BMP signaling pathway" evidence=ISO]
RGD:1311983 InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534
Pfam:PF06535 IPI:IPI00367893 Ensembl:ENSRNOT00000017473
UCSC:RGD:1311983 ArrayExpress:F1LVE7 Uniprot:F1LVE7
Length = 447
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 99/257 (38%), Positives = 138/257 (53%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 149 SFHKHSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 208
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F + N K+ N LK+
Sbjct: 209 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPSAFADGSKNGGDKHGANS-LKITEKV 264
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 265 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 321
Query: 197 ERLDIVTSRGHM-TDRDHALAK----CKDTEELSNDIIN-----NLTDYYLDWCVFDTMT 246
+++D R + + R A A +T + + D Y CVFD +T
Sbjct: 322 QQIDFQAFRANAESPRRPAAASPSPVVPETFPYETAVAKCKEKLPVEDLYYQACVFDLLT 381
Query: 247 AGISYDFTAAAHSAQAD 263
G +FT AA+ A D
Sbjct: 382 TG-DVNFTLAAYYALED 397
>UNIPROTKB|D4A188 [details] [associations]
symbol:Rgma "Protein Rgma" species:10116 "Rattus
norvegicus" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0015026 "coreceptor
activity" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] RGD:1311983 GO:GO:0009986 EMBL:CH473980 GO:GO:0030510
GO:GO:0001843 CTD:56963 KO:K06847 OrthoDB:EOG4001JB
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 IPI:IPI00948785 RefSeq:NP_001100994.1
UniGene:Rn.22326 Ensembl:ENSRNOT00000068766 GeneID:308739
KEGG:rno:308739 NextBio:659440 Uniprot:D4A188
Length = 449
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 99/257 (38%), Positives = 138/257 (53%)
Query: 22 SFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 151 SFHKHSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 210
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F + N K+ N LK+
Sbjct: 211 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPSAFADGSKNGGDKHGANS-LKITEKV 266
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 267 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 323
Query: 197 ERLDIVTSRGHM-TDRDHALAK----CKDTEELSNDIIN-----NLTDYYLDWCVFDTMT 246
+++D R + + R A A +T + + D Y CVFD +T
Sbjct: 324 QQIDFQAFRANAESPRRPAAASPSPVVPETFPYETAVAKCKEKLPVEDLYYQACVFDLLT 383
Query: 247 AGISYDFTAAAHSAQAD 263
G +FT AA+ A D
Sbjct: 384 TG-DVNFTLAAYYALED 399
>UNIPROTKB|E1BFA9 [details] [associations]
symbol:RGMA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030510 "regulation of BMP signaling pathway"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0015026 "coreceptor activity" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] GO:GO:0009986 GO:GO:0030510 GO:GO:0001843
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:PGDSQER EMBL:DAAA02051957
EMBL:DAAA02051958 IPI:IPI00709864 Ensembl:ENSBTAT00000024758
Uniprot:E1BFA9
Length = 452
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 99/261 (37%), Positives = 136/261 (52%)
Query: 22 SFHGTR---RFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSP 78
SFH + HCGLFGDPHL+TF + +QTC+V+GAWPLIDN YL VQVTN + GS
Sbjct: 150 SFHNRAAAPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSA 209
Query: 79 AXXXXXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDP 138
A + C ++K Y+A+ D LP +F + N K+ N LK+
Sbjct: 210 ATATSKLTIIFKNFQE--CVDQKVYQAEMDE-LPAAFADGSKNGGEKHGANS-LKITEKV 265
Query: 139 SGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNT--LQLCTLGCPPS 196
SG H EI KYI TTIVVR+VG+YL + ++PEE+V +++D ++ L LC GCP +
Sbjct: 266 SGQH--VEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVN-AVEDRDSQGLYLCLRGCPLN 322
Query: 197 ERLDIVTSRGHMTDRDHA--------LAKCKDTEELSNDIIN-----NLTDYYLDWCVFD 243
+++D R + A DT + + D Y CVFD
Sbjct: 323 QQIDFQAFRAGAAEGPGAPQPPAASPAPPAPDTFPYETAVAKCKEKLPVEDLYYQACVFD 382
Query: 244 TMTAGISYDFTAAAHSAQADV 264
+T G +FT AA+ A DV
Sbjct: 383 LLTTG-DVNFTLAAYYALEDV 402
>MGI|MGI:1916049 [details] [associations]
symbol:Rgmb "RGM domain family, member B" species:10090 "Mus
musculus" [GO:0005793 "endoplasmic reticulum-Golgi intermediate
compartment" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0007165
"signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IDA]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
MGI:MGI:1916049 GO:GO:0045893 GO:GO:0007155 GO:GO:0045121
GO:GO:0042802 GO:GO:0030509 GO:GO:0005793 GO:GO:0046658
eggNOG:NOG87951 HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 CTD:285704 OrthoDB:EOG4GHZNX
EMBL:AJ557514 EMBL:AK035713 EMBL:AK080819 EMBL:BC096024
EMBL:BC138890 IPI:IPI00387510 RefSeq:NP_848730.2 UniGene:Mm.293466
STRING:Q7TQ33 PRIDE:Q7TQ33 Ensembl:ENSMUST00000170578 GeneID:68799
KEGG:mmu:68799 UCSC:uc008aow.1 InParanoid:Q501K0 OMA:VRALWIS
NextBio:327953 Bgee:Q7TQ33 CleanEx:MM_RGMB Genevestigator:Q7TQ33
GermOnline:ENSMUSG00000048027 Uniprot:Q7TQ33
Length = 436
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 95/247 (38%), Positives = 133/247 (53%)
Query: 32 CGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXXXXX 91
CGLFGDPHL+TF + +QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 166 CGLFGDPHLRTFKDHFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKVTIIFKA 225
Query: 92 GRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKY 151
CT++K Y+A D LP +F++ G S + D L + SG + E+ +Y
Sbjct: 226 QHE--CTDQKVYQAVTDD-LPAAFVD-GTTSGG-DGDVKSLHIVEKESGRY--VEMHARY 278
Query: 152 IETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLD-----IVTSRG 206
I TT+ VR++G+YL ++ ++PE+L S ++ LQLC GCP SE +D + G
Sbjct: 279 IGTTVFVRQLGRYLTLAIRMPEDLAM-SYEESQDLQLCVNGCPMSECIDDGQGQVSAILG 337
Query: 207 HMTDRDHALAKCKD-TEELSNDIINN---LTDYYLDWCVFDTMTAGISYDFTAAAHSAQA 262
H ++ T E ++ + + D Y CVFD +T G + +FTAAAHSA
Sbjct: 338 HSLPHTTSVQAWPGYTLETASTQCHEKMPVKDIYFQSCVFDLLTTGDA-NFTAAAHSALE 396
Query: 263 DVLRFDP 269
DV P
Sbjct: 397 DVEALHP 403
>UNIPROTKB|F1NNI0 [details] [associations]
symbol:RGMB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005793 "endoplasmic reticulum-Golgi intermediate
compartment" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
GO:GO:0045893 GO:GO:0007155 GO:GO:0030509 GO:GO:0005793
GO:GO:0046658 InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534
Pfam:PF06535 GeneTree:ENSGT00390000008488 OMA:VRALWIS
EMBL:AADN02065411 IPI:IPI00575417 Ensembl:ENSGALT00000024669
Uniprot:F1NNI0
Length = 414
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 93/247 (37%), Positives = 134/247 (54%)
Query: 32 CGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXXXXX 91
CGLFGDPHL+TF + +QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 140 CGLFGDPHLRTFKDHFQTCKVEGAWPLIDNNYLTVQVTNVPVVPGSSATATNKITIIFKS 199
Query: 92 GRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKY 151
+ CT++K Y+A D LP +F++ N + L++ SG + E+ +Y
Sbjct: 200 YQH--CTDQKVYQAVTDD-LPAAFVDGTTGGGDGNTKS--LQIVDKVSGKY--VEMHARY 252
Query: 152 IETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDI-----VTSRG 206
I TT+ +R++G YL ++ ++P+EL + ++ LQLC GCP SER+D + RG
Sbjct: 253 IGTTVYIRQLGHYLTLAIRMPQELAM-AYEESQDLQLCVNGCPSSERIDDSGHLPLPVRG 311
Query: 207 HMTDRDHALA-KCKDTEELSNDIINN---LTDYYLDWCVFDTMTAGISYDFTAAAHSAQA 262
+ + A + T E + + + D Y CVFD +T G + +FTAAAHSA
Sbjct: 312 QVLPQAGAARPRSAYTLETATTKCHEKMLVKDIYFYSCVFDLLTTGDA-NFTAAAHSALQ 370
Query: 263 DVLRFDP 269
DV P
Sbjct: 371 DVEALHP 377
>UNIPROTKB|F1MFY9 [details] [associations]
symbol:RGMB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005793 "endoplasmic reticulum-Golgi
intermediate compartment" evidence=IEA] GO:GO:0045893 GO:GO:0007155
GO:GO:0030509 GO:GO:0005793 GO:GO:0046658 InterPro:IPR009496
InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:VRALWIS EMBL:DAAA02021391
IPI:IPI01001612 Ensembl:ENSBTAT00000015746 Uniprot:F1MFY9
Length = 417
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 93/247 (37%), Positives = 131/247 (53%)
Query: 32 CGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXXXXX 91
CGLFGDPHL+TF + +QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 143 CGLFGDPHLRTFKDHFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKITIIFKA 202
Query: 92 GRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKY 151
R CT++K Y+A D LP +F++ + + D L++ SG E+ +Y
Sbjct: 203 HRE--CTDQKVYQAVTDD-LPAAFVDGSTSGG--DGDPKSLRIVERESGRS--VEMHARY 255
Query: 152 IETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLD-----IVTSRG 206
+ TT+ VR++G+YL ++ ++PE L + ++ LQLC GCP ER+D + G
Sbjct: 256 MGTTVFVRQLGRYLTLAIRMPEALAM-AYEESQDLQLCVTGCPLGERIDDGQGQVSAILG 314
Query: 207 HMTDRDHALAKCKD-TEELSNDIINN---LTDYYLDWCVFDTMTAGISYDFTAAAHSAQA 262
R A T E ++ + + D Y CVFD +T G + +FTAAAHSA
Sbjct: 315 PGLPRSPAAPAWPGYTLETASARCHEQMPVKDIYFQSCVFDLLTTGDA-NFTAAAHSALE 373
Query: 263 DVLRFDP 269
DV P
Sbjct: 374 DVEALHP 380
>ZFIN|ZDB-GENE-040527-2 [details] [associations]
symbol:rgmb "RGM domain family, member B"
species:7955 "Danio rerio" [GO:0046658 "anchored to plasma
membrane" evidence=ISS] ZFIN:ZDB-GENE-040527-2 GO:GO:0046658
eggNOG:NOG87951 HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 CTD:285704 OrthoDB:EOG4GHZNX
OMA:VRALWIS EMBL:FP016029 EMBL:CT033810 EMBL:AY613929
IPI:IPI00484781 RefSeq:NP_001001727.1 RefSeq:NP_001186986.1
UniGene:Dr.151638 UniGene:Dr.84236 STRING:Q6IYD1
Ensembl:ENSDART00000010757 Ensembl:ENSDART00000109688
GeneID:100150511 GeneID:414273 KEGG:dre:100150511 KEGG:dre:414273
InParanoid:Q6IYD1 NextBio:20794130 Uniprot:Q6IYD1
Length = 436
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 94/264 (35%), Positives = 132/264 (50%)
Query: 24 HGTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXX 83
H + CGLFGDPHL+TF + +QTC+V GAWPLIDN YL VQVTN + GS A
Sbjct: 150 HPRLMYLFCGLFGDPHLRTFKDQFQTCKVEGAWPLIDNNYLSVQVTNVPVVYGSSATATN 209
Query: 84 XXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHE 143
+ CT++K Y+A D LP +F++ ++ ++ + +E P G H
Sbjct: 210 KITIIFKPYQE--CTDQKVYQAVTDD-LPAAFVDGTISGGDSETRSIWI-LEKSP-GRH- 263
Query: 144 RAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIVT 203
EI YI TI++R+ G+YL ++ ++PEEL + + LQLC GCP SER+D
Sbjct: 264 -VEIHAAYIGVTIIIRQQGRYLTLAVRMPEELAM-AFDETQDLQLCMNGCPTSERID--- 318
Query: 204 SRGHMT----------------DRDHALAKCKDTEELSNDIINNLT--DYYLDWCVFDTM 245
GH+ R A E S + L D Y CVFD +
Sbjct: 319 QEGHLQLPVLGLQQAGFQQQQQPRVEAQRGVFTLESASRRCRDQLEVKDIYFHSCVFDLL 378
Query: 246 TAGISYDFTAAAHSAQADVLRFDP 269
T G + +FT AA++A D+ P
Sbjct: 379 TTGDA-NFTTAAYNALKDMETLHP 401
>ZFIN|ZDB-GENE-030131-561 [details] [associations]
symbol:rgmd "RGM domain family, member D"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-030131-561 InterPro:IPR009496 InterPro:IPR010536
Pfam:PF06534 Pfam:PF06535 GeneTree:ENSGT00390000008488
EMBL:BX510913 IPI:IPI00995812 Ensembl:ENSDART00000124646
ArrayExpress:E9QCG3 Bgee:E9QCG3 Uniprot:E9QCG3
Length = 479
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 97/284 (34%), Positives = 141/284 (49%)
Query: 27 RRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXX 86
+++ HCGLFGDPHL+TF +++QTCRV GAWPLI N YL VQVTN + EGS A
Sbjct: 193 KKYGHCGLFGDPHLRTFRDEFQTCRVEGAWPLIHNRYLSVQVTNVPVVEGSSATATNKIT 252
Query: 87 XXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAE 146
CT +K Y+A + LP +F G S K + VE + +
Sbjct: 253 VIFKSYHD--CTEQKVYQATTED-LPSAF-QDGTRSGGKGESLWI--VEGSGGLGIRQVK 306
Query: 147 IFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIVTSRG 206
I +Y+ T+I+VR+VG+YL + ++PE+L E + LQLC GCP SE + +
Sbjct: 307 IHARYLGTSIIVRQVGRYLTFAIRMPEDLAEEN----GGLQLCLHGCPRSEVI-----KA 357
Query: 207 HMTDRDHALAKCK---------DTEELSN------DIINNLT----------DYYLDWCV 241
H+ +R +L + D E+ + D++ T D Y CV
Sbjct: 358 HVLNRQQSLRPPRLMGGWYGEDDGGEVKSGLSSHIDMLERATTKCREMLQVEDVYFQSCV 417
Query: 242 FDTMTAGISYDFTAAAHSAQADVLRFDPSSLNNRTTLYLTEPVN 285
FD +T G +F+ AA+ A D+ PS+L + T PV+
Sbjct: 418 FDLLTTG-DPEFSMAAYGALEDLKALPPSTLKQSSPR--TPPVS 458
>UNIPROTKB|E1BI30 [details] [associations]
symbol:HFE2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055072 "iron ion homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030509 "BMP signaling
pathway" evidence=IEA] [GO:0015026 "coreceptor activity"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] GO:GO:0005886 GO:GO:0005615 GO:GO:0009986
GO:GO:0045944 GO:GO:0030509 GO:GO:0055072 GO:GO:0015026 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 CTD:148738 OMA:PPGFLHC
EMBL:DAAA02007321 IPI:IPI00713811 RefSeq:NP_001193843.1
UniGene:Bt.55663 Ensembl:ENSBTAT00000029092 GeneID:100335368
KEGG:bta:100335368 Uniprot:E1BI30
Length = 427
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 84/243 (34%), Positives = 127/243 (52%)
Query: 29 FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXX 88
F HC FGDPH++TF++ + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 165 FLHCASFGDPHVRTFHHHFHTCRVQGAWPLLDNDFLFVQATSSPVALGANATTTRKLTII 224
Query: 89 XXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIF 148
+ C ++K Y+A+ D+ LP +F + +N + + + ++P H EI
Sbjct: 225 FKNMQE--CIDQKVYQAEVDN-LPAAFEDGSINGGDRPGGSSLSIRTANPGSH---VEIR 278
Query: 149 IKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLD--IVTSRG 206
YI TTI++R+ L+ S ++ E++ + LQLC GCPPS+RL + + RG
Sbjct: 279 AAYIGTTIIIRQTAGQLSFSIRVAEDVAR-AFSAEQDLQLCVGGCPPSQRLSRSVRSRRG 337
Query: 207 HMTDRDHALAKCKDTEELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQADVLR 266
+T D A CK E L + D Y CVFD + +G +FT AA +A D
Sbjct: 338 TIT-MDTARQLCK--EGLP------VEDAYFHSCVFDVLISG-DPNFTVAAQAALEDARA 387
Query: 267 FDP 269
F P
Sbjct: 388 FLP 390
>RGD|1310195 [details] [associations]
symbol:Hfe2 "hemochromatosis type 2 (juvenile)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0015026 "coreceptor activity"
evidence=IEA;ISO] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] [GO:0030509 "BMP signaling pathway" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0055072 "iron ion homeostasis"
evidence=IEA;ISO] RGD:1310195 GO:GO:0005615 GO:GO:0009986
GO:GO:0031225 GO:GO:0045944 GO:GO:0016323 GO:GO:0030509
GO:GO:0055072 GO:GO:0015026 eggNOG:NOG87951 HOGENOM:HOG000013072
HOVERGEN:HBG057627 InterPro:IPR009496 InterPro:IPR010536
Pfam:PF06534 Pfam:PF06535 OrthoDB:EOG498V16 EMBL:AK098165
IPI:IPI00562233 UniGene:Rn.22490 STRING:Q8N7M5 PRIDE:Q8N7M5
UCSC:RGD:1310195 InParanoid:Q8N7M5 ArrayExpress:Q8N7M5
Genevestigator:Q8N7M5 GermOnline:ENSRNOG00000021200 Uniprot:Q8N7M5
Length = 422
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 88/246 (35%), Positives = 129/246 (52%)
Query: 24 HG-TRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXX 82
HG T F HC FGDPH+++F+N + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 154 HGRTPGFLHCASFGDPHVRSFHNHFHTCRVQGAWPLLDNDFLFVQATSSPVASGANATTI 213
Query: 83 XXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHH 142
+ C ++K Y+A+ D+ LP +F + VN + + L +++ G H
Sbjct: 214 RKITIIFKNMQE--CIDQKVYQAEVDN-LPAAFEDGSVNGGDRPGGSS-LSIQTANLGSH 269
Query: 143 ERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIV 202
EI YI TTI+VR+ L+ S ++ E++ + LQLC GCPPS+RL
Sbjct: 270 --VEIRAAYIGTTIIVRQTAGQLSFSIRVAEDVAR-AFSAEQDLQLCVGGCPPSQRL--- 323
Query: 203 TSRGHMTDRDHALAKCKDT-EELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQ 261
SR ++R+ A DT L + + + D Y CVFD +G +FT AA SA
Sbjct: 324 -SR---SERNRRGAIAIDTARRLCKEGLP-VEDAYFQSCVFDVSVSG-DPNFTVAAQSAL 377
Query: 262 ADVLRF 267
D F
Sbjct: 378 DDARVF 383
>UNIPROTKB|F1LRU6 [details] [associations]
symbol:Hfe2 "Hemojuvelin" species:10116 "Rattus norvegicus"
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0015026 "coreceptor activity" evidence=IEA] [GO:0030509 "BMP
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055072 "iron ion homeostasis" evidence=IEA] RGD:1310195
GO:GO:0005886 GO:GO:0005615 GO:GO:0009986 GO:GO:0045944
GO:GO:0030509 GO:GO:0055072 GO:GO:0015026 InterPro:IPR009496
InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535 IPI:IPI00562233
Ensembl:ENSRNOT00000068540 ArrayExpress:F1LRU6 Uniprot:F1LRU6
Length = 423
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 88/246 (35%), Positives = 129/246 (52%)
Query: 24 HG-TRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXX 82
HG T F HC FGDPH+++F+N + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 154 HGRTPGFLHCASFGDPHVRSFHNHFHTCRVQGAWPLLDNDFLFVQATSSPVASGANATTI 213
Query: 83 XXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHH 142
+ C ++K Y+A+ D+ LP +F + VN + + L +++ G H
Sbjct: 214 RKITIIFKNMQE--CIDQKVYQAEVDN-LPAAFEDGSVNGGDRPGGSS-LSIQTANLGSH 269
Query: 143 ERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIV 202
EI YI TTI+VR+ L+ S ++ E++ + LQLC GCPPS+RL
Sbjct: 270 --VEIRAAYIGTTIIVRQTAGQLSFSIRVAEDVAR-AFSAEQDLQLCVGGCPPSQRL--- 323
Query: 203 TSRGHMTDRDHALAKCKDT-EELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQ 261
SR ++R+ A DT L + + + D Y CVFD +G +FT AA SA
Sbjct: 324 -SR---SERNRRGAIAIDTARRLCKEGLP-VEDAYFQSCVFDVSVSG-DPNFTVAAQSAL 377
Query: 262 ADVLRF 267
D F
Sbjct: 378 DDARVF 383
>UNIPROTKB|Q6ZVN8 [details] [associations]
symbol:HFE2 "Hemojuvelin" species:9606 "Homo sapiens"
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0015026 "coreceptor activity" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0055072 "iron ion
homeostasis" evidence=IGI;IDA] [GO:0007411 "axon guidance"
evidence=TAS] GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005615 GO:GO:0009986 GO:GO:0031225 GO:GO:0045944
GO:GO:0016323 GO:GO:0030509 GO:GO:0055072 GO:GO:0015026
Pathway_Interaction_DB:bmppathway Orphanet:79230 EMBL:CH471244
eggNOG:NOG87951 HOGENOM:HOG000013072 HOVERGEN:HBG057627 KO:K06847
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
EMBL:AY372521 EMBL:AK092682 EMBL:AK124273 EMBL:AK092692
EMBL:AK096905 EMBL:DQ309445 EMBL:AL355505 EMBL:AL138842
EMBL:BC017926 EMBL:BC085604 IPI:IPI00329576 IPI:IPI00400863
IPI:IPI00419814 RefSeq:NP_660320.3 RefSeq:NP_973733.1
RefSeq:NP_998817.1 RefSeq:NP_998818.1 RefSeq:XP_003960223.1
RefSeq:XP_003960224.1 RefSeq:XP_003960225.1 UniGene:Hs.632436
ProteinModelPortal:Q6ZVN8 STRING:Q6ZVN8 PhosphoSite:Q6ZVN8
DMDM:51316254 PRIDE:Q6ZVN8 DNASU:148738 Ensembl:ENST00000336751
Ensembl:ENST00000357836 Ensembl:ENST00000475797
Ensembl:ENST00000497365 Ensembl:ENST00000577520
Ensembl:ENST00000579423 Ensembl:ENST00000580693
Ensembl:ENST00000580823 GeneID:101060525 GeneID:148738
KEGG:hsa:101060525 KEGG:hsa:148738 UCSC:uc001eni.2 UCSC:uc001enj.2
CTD:148738 GeneCards:GC01P145413 HGNC:HGNC:4887 HPA:HPA014472
MIM:602390 MIM:608374 neXtProt:NX_Q6ZVN8 PharmGKB:PA29264
InParanoid:Q6ZVN8 OMA:PPGFLHC PhylomeDB:Q6ZVN8 GenomeRNAi:148738
NextBio:85978 ArrayExpress:Q6ZVN8 Bgee:Q6ZVN8 CleanEx:HS_HFE2
Genevestigator:Q6ZVN8 GermOnline:ENSG00000168509 Uniprot:Q6ZVN8
Length = 426
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 86/243 (35%), Positives = 128/243 (52%)
Query: 29 FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXX 88
F HC FGDPH+++F++ + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 164 FLHCASFGDPHVRSFHHHFHTCRVQGAWPLLDNDFLFVQATSSPMALGANATATRKLTII 223
Query: 89 XXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIF 148
+ C ++K Y+A+ D+ LP++F + +N + + L +++ G+H EI
Sbjct: 224 FKNMQE--CIDQKVYQAEVDN-LPVAFEDGSINGGDRPGGSS-LSIQTANPGNH--VEIQ 277
Query: 149 IKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIV--TSRG 206
YI TTI++R+ L+ S K+ E+ V + LQLC GCPPS+RL RG
Sbjct: 278 AAYIGTTIIIRQTAGQLSFSIKVAED-VAMAFSAEQDLQLCVGGCPPSQRLSRSERNRRG 336
Query: 207 HMTDRDHALAKCKDTEELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQADVLR 266
+T D A CK E L + D Y CVFD + +G +FT AA +A D
Sbjct: 337 AITI-DTARRLCK--EGLP------VEDAYFHSCVFDVLISG-DPNFTVAAQAALEDARA 386
Query: 267 FDP 269
F P
Sbjct: 387 FLP 389
>MGI|MGI:1916835 [details] [associations]
symbol:Hfe2 "hemochromatosis type 2 (juvenile) (human
homolog)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0009986 "cell surface" evidence=IDA] [GO:0015026 "coreceptor
activity" evidence=IGI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=IGI;IMP] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0055072 "iron ion homeostasis" evidence=ISO;IMP]
MGI:MGI:1916835 GO:GO:0005615 GO:GO:0009986 GO:GO:0031225
GO:GO:0045944 GO:GO:0016323 GO:GO:0030509 GO:GO:0055072
GO:GO:0015026 eggNOG:NOG87951 HOGENOM:HOG000013072
HOVERGEN:HBG057627 KO:K06847 InterPro:IPR009496 InterPro:IPR010536
Pfam:PF06534 Pfam:PF06535 GeneTree:ENSGT00390000008488 CTD:148738
OMA:PPGFLHC EMBL:AJ557515 EMBL:AK009636 EMBL:AK014082 EMBL:BC022603
IPI:IPI00380441 IPI:IPI00459430 RefSeq:NP_081402.3
UniGene:Mm.171314 ProteinModelPortal:Q7TQ32 STRING:Q7TQ32
PhosphoSite:Q7TQ32 PRIDE:Q7TQ32 DNASU:69585
Ensembl:ENSMUST00000049208 GeneID:69585 KEGG:mmu:69585
UCSC:uc008qna.2 InParanoid:Q7TQ32 OrthoDB:EOG498V16 NextBio:329852
PMAP-CutDB:Q7TQ32 Bgee:Q7TQ32 CleanEx:MM_HFE2 Genevestigator:Q7TQ32
GermOnline:ENSMUSG00000038403 Uniprot:Q7TQ32
Length = 420
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 84/246 (34%), Positives = 128/246 (52%)
Query: 24 HGTRR-FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXX 82
HG F HC FGDPH+++F+N + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 151 HGRAPGFLHCASFGDPHVRSFHNQFHTCRVQGAWPLLDNDFLFVQATSSPVSSGANATTI 210
Query: 83 XXXXXXXXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHH 142
+ C ++K Y+A+ D+ LP +F + +N + + L +++ G H
Sbjct: 211 RKITIIFKNMQE--CIDQKVYQAEVDN-LPAAFEDGSINGGDRPGGSS-LSIQTANLGSH 266
Query: 143 ERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIV 202
EI YI TTI++R+ L+ S ++ E++ + LQLC GCPPS+RL
Sbjct: 267 --VEIRAAYIGTTIIIRQTAGQLSFSIRVAEDVAR-AFSAEQDLQLCVGGCPPSQRL--- 320
Query: 203 TSRGHMTDRDHALAKCKDT-EELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQ 261
SR ++R+ A DT L + + + D Y CVFD +G +FT AA +A
Sbjct: 321 -SR---SERNRRGAIAIDTARRLCKEGLP-VEDAYFQSCVFDVSVSG-DPNFTVAAQTAL 374
Query: 262 ADVLRF 267
D F
Sbjct: 375 DDARIF 380
>ZFIN|ZDB-GENE-030131-651 [details] [associations]
symbol:hfe2 "hemochromatosis type 2" species:7955
"Danio rerio" [GO:0030903 "notochord development" evidence=IMP]
[GO:0061053 "somite development" evidence=IMP] [GO:0046658
"anchored to plasma membrane" evidence=ISS]
ZFIN:ZDB-GENE-030131-651 GO:GO:0046658 GO:GO:0030903 GO:GO:0061053
HOVERGEN:HBG057627 InterPro:IPR009496 InterPro:IPR010536
Pfam:PF06534 Pfam:PF06535 EMBL:AY423559 IPI:IPI00760262
UniGene:Dr.67059 STRING:Q6TDT6 PRIDE:Q6TDT6 InParanoid:Q6TDT6
NextBio:20807588 Bgee:Q6TDT6 Uniprot:Q6TDT6
Length = 410
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 29 FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXX 88
+ HCG+FGDPH++TFN ++QTC V+GAWPLIDN YL +Q T+ RE S
Sbjct: 150 YLHCGVFGDPHIRTFNEEFQTCAVQGAWPLIDNQYLYIQATSSPTRESSDTTILTEVTVI 209
Query: 89 XXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIF 148
R C ++ Y+A+ + +P +F + V + L++ S G H AEI+
Sbjct: 210 FQNWRE--CAEQQVYQAKLGN-VPPAFADGSVTGGDRRGHQS-LRIHSHDPGRH--AEIW 263
Query: 149 IKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIVTSRGHM 208
+I T I++R+VG+ L +S + P +VE S LQLC GCP S+RL+++ H
Sbjct: 264 ATHIGTMIIMRQVGQSLNLSVRSPRAIVE-SYTPEQDLQLCGWGCPISQRLEML----HA 318
Query: 209 TDRDHALAKC 218
D A C
Sbjct: 319 HPFDPAYTHC 328
Score = 155 (59.6 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 111 LPLSFINSGVNSHSKNADNVVLKVESDPSGHHERAEIFIKYIETTIVVRRVGKYLAVSAK 170
+P +F + V + L++ S G H AEI+ +I T I++R+VG+ L +S +
Sbjct: 229 VPPAFADGSVTGGDRRGHQS-LRIHSHDPGRH--AEIWATHIGTMIIMRQVGQSLNLSVR 285
Query: 171 LPEELVEPSIQDPNTLQLCTLGCPPSERLDIVTSRGHMTDRDHALAKCKDTEELSNDIIN 230
P +VE S LQLC GCP S+RL+++ H D A C + +
Sbjct: 286 SPRAIVE-SYTPEQDLQLCGWGCPISQRLEML----HAHPFDPAYTHC-------SSLFP 333
Query: 231 NLTDYYLDWCVFDTMTAG-ISYDFTAAAHSAQADVLRFDPSSLN 273
D Y C+FD G ++ +A A A + FDP+ ++
Sbjct: 334 G-RDVYFQACLFDVQVTGDVNSSASAVAALEDARAMIFDPARVH 376
>WB|WBGene00022154 [details] [associations]
symbol:drag-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0061065 "regulation of dauer larval development" evidence=IGI]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IMP] [GO:0030510 "regulation
of BMP signaling pathway" evidence=IGI] GO:GO:0005886 GO:GO:0040014
GO:GO:0007501 GO:GO:0030510 EMBL:FO080942 InterPro:IPR009496
InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:VRALWIS GO:GO:0061065
EMBL:HM154523 EMBL:HM154524 RefSeq:NP_490881.4 UniGene:Cel.28412
EnsemblMetazoa:Y71G12B.16 GeneID:190602 KEGG:cel:CELE_Y71G12B.16
CTD:190602 WormBase:Y71G12B.16 Uniprot:G5EDE5
Length = 408
Score = 267 (99.0 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 83/267 (31%), Positives = 116/267 (43%)
Query: 20 SCSFH---GTRRFKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREG 76
+C F+ R+ K+C LFGDPHL FN QTC GA PL+DN Y VQVTN +R G
Sbjct: 107 TCYFNPPPSNRKLKYCSLFGDPHLIMFNGSVQTCSEEGARPLVDNRYFLVQVTNRNVR-G 165
Query: 77 SPAXXXXXXXXXXXXGRSTPCTNEKTYEAQADSP-LPLSFINSGVNSHSKNADNVVLKVE 135
R CT YEA +D LP F++ G + +V + +
Sbjct: 166 EALTTTVTKVTVLV--RKHNCTASLRYEASSDEEGLPRGFVD-GTTFQMTSKHSVEVLWQ 222
Query: 136 SDPSGHHERAEIFIKYIETTIVVRRVGKYLAVSAKLPEELVEPSIQDPNTLQLCTLGCPP 195
D EI + +I ++I +RR G YL+VS + P ++E +LC GC
Sbjct: 223 DD-----NYVEIALHFIHSSIHIRRQGPYLSVSVRAPTIVLETG--GDVARELCWSGCRK 275
Query: 196 SERLDI-----VTSRGHMTDRDHALAKCKDTEELSNDIINNLTDYYLDWCVFDTMTAGIS 250
S R+ +T + R K E+ DI N + D CVFD M G
Sbjct: 276 SSRIPAELAVEMTKKFAECYRRRVHVPKKVAEDRCKDIGN--IGVFFDACVFDLMFTGDD 333
Query: 251 YDFTAAAHSAQADVLRFDPSSLNNRTT 277
Y + +A++D R P + T
Sbjct: 334 Y-LVHLSRAAESDFRRLAPHHFQSHVT 359
>UNIPROTKB|F1SDF6 [details] [associations]
symbol:HFE2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055072 "iron ion homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030509 "BMP signaling
pathway" evidence=IEA] [GO:0015026 "coreceptor activity"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] GO:GO:0005886 GO:GO:0005615 GO:GO:0009986
GO:GO:0045944 GO:GO:0030509 GO:GO:0055072 GO:GO:0015026
InterPro:IPR009496 InterPro:IPR010536 Pfam:PF06534 Pfam:PF06535
GeneTree:ENSGT00390000008488 OMA:PPGFLHC EMBL:CU151864
Ensembl:ENSSSCT00000007318 Uniprot:F1SDF6
Length = 390
Score = 188 (71.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 29 FKHCGLFGDPHLKTFNNDYQTCRVRGAWPLIDNPYLGVQVTNELIREGSPAXXXXXXXXX 88
F HC FGDPH+++F++ + TCRV+GAWPL+DN +L VQ T+ + G+ A
Sbjct: 170 FLHCASFGDPHVRSFHHHFHTCRVQGAWPLLDNDFLFVQATSFPVALGANATTTQKLTII 229
Query: 89 XXXGRSTPCTNEKTYEAQADSPLPLSFINSGVNSHSKNADNV 130
+ C ++K Y A+ D+ LP +F + + K A++V
Sbjct: 230 FKNMQE--CIDQKVYRAEVDN-LPAAFEDGSITFSIKVAEDV 268
Score = 114 (45.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 39/107 (36%), Positives = 51/107 (47%)
Query: 165 LAVSAKLPEELVEPSIQDPNTLQLCTLGCPPSERLDIV--TSRGHMTDRDHALAKCKDTE 222
+ S K+ E++ + LQLC GCPPS+RL + RG +T D A CK E
Sbjct: 258 ITFSIKVAEDVAR-AFSAEQDLQLCVGGCPPSQRLSRSERSRRGAITI-DTARRLCK--E 313
Query: 223 ELSNDIINNLTDYYLDWCVFDTMTAGISYDFTAAAHSAQADVLRFDP 269
L + D Y CVFD T+G +FT AA +A D F P
Sbjct: 314 GLP------VEDVYFHSCVFDVFTSG-DPNFTVAAQAALEDARAFLP 353
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 271 0.00098 114 3 11 22 0.37 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 608 (65 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.81u 0.10s 21.91t Elapsed: 00:00:02
Total cpu time: 21.81u 0.10s 21.91t Elapsed: 00:00:02
Start: Thu Aug 15 14:48:45 2013 End: Thu Aug 15 14:48:47 2013