BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17007
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6RFL5|BSH_CHICK Brain-specific homeobox protein homolog OS=Gallus gallus GN=BSX
PE=2 SV=1
Length = 233
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
Query: 2 AAYLSYPSPYLHKSD-----SFYITPQGLPFGSLFSTSPH-ELGSKHCRRRKARTVFSDH 55
A +P P LHK + +++T G+P +LF H EL KHCRRRKARTVFSD
Sbjct: 63 ALLAPHPHPALHKPEHHHHHPYFLTTSGVPVPALFPHHAHAELPGKHCRRRKARTVFSDS 122
Query: 56 QLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
QL+GLEKRFE QRYLSTPERVELATAL LSETQVKTWFQNR
Sbjct: 123 QLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNR 163
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 97 LPFGSLFSTSPH-ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQ 155
+P +LF H EL KHCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL
Sbjct: 91 VPVPALFPHHAHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALS 150
Query: 156 LSETQL 161
LSETQ+
Sbjct: 151 LSETQV 156
>sp|Q3C1V8|BSH_HUMAN Brain-specific homeobox protein homolog OS=Homo sapiens GN=BSX PE=2
SV=2
Length = 233
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 75/100 (75%), Gaps = 7/100 (7%)
Query: 1 MAAYLSYPSPYLHKSD---SFYITPQGLPFGSLFSTSPH-ELGSKHCRRRKARTVFSDHQ 56
+A + +P LHK D +++T G+P +LF H EL KHCRRRKARTVFSD Q
Sbjct: 65 LAPHAHHP---LHKGDHHHPYFLTTSGMPVPALFPHPQHAELPGKHCRRRKARTVFSDSQ 121
Query: 57 LTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
L+GLEKRFE QRYLSTPERVELATAL LSETQVKTWFQNR
Sbjct: 122 LSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNR 161
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 97 LPFGSLFSTSPH-ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQ 155
+P +LF H EL KHCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL
Sbjct: 89 MPVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALS 148
Query: 156 LSETQL 161
LSETQ+
Sbjct: 149 LSETQV 154
>sp|Q810B3|BSH_MOUSE Brain-specific homeobox protein homolog OS=Mus musculus GN=Bsx PE=1
SV=1
Length = 232
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 70/89 (78%), Gaps = 4/89 (4%)
Query: 12 LHKSD---SFYITPQGLPFGSLFSTSPH-ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQ 67
LHK D +++T G+P +LF H EL KHCRRRKARTVFSD QL+GLEKRFE Q
Sbjct: 73 LHKGDHHHPYFLTTSGMPVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQ 132
Query: 68 RYLSTPERVELATALQLSETQVKTWFQNR 96
RYLSTPERVELATAL LSETQVKTWFQNR
Sbjct: 133 RYLSTPERVELATALSLSETQVKTWFQNR 161
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 97 LPFGSLFSTSPH-ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQ 155
+P +LF H EL KHCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL
Sbjct: 89 MPVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALS 148
Query: 156 LSETQL 161
LSETQ+
Sbjct: 149 LSETQV 154
>sp|Q6R3Q6|BSH_DANRE Brain-specific homeobox protein homolog OS=Danio rerio GN=bsx PE=2
SV=1
Length = 227
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 24 GLPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQ 83
G+ +LF P EL KHCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL
Sbjct: 85 GMQMPALFQHHP-ELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALS 143
Query: 84 LSETQVKTWFQNR 96
LSETQVKTWFQNR
Sbjct: 144 LSETQVKTWFQNR 156
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 92 WFQNRLPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELA 151
+F + + +LF P EL KHCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELA
Sbjct: 81 FFTSGMQMPALFQHHP-ELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELA 139
Query: 152 TALQLSETQL 161
TAL LSETQ+
Sbjct: 140 TALSLSETQV 149
>sp|Q04787|BSH_DROME Brain-specific homeobox protein OS=Drosophila melanogaster GN=bsh
PE=2 SV=5
Length = 429
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+HCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL LSETQVKTWFQNR
Sbjct: 270 RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNR 325
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 46/49 (93%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+HCRRRKARTVFSD QL+GLEKRFE QRYLSTPERVELATAL LSETQ+
Sbjct: 270 RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQV 318
>sp|Q9HBU1|BARX1_HUMAN Homeobox protein BarH-like 1 OS=Homo sapiens GN=BARX1 PE=1 SV=2
Length = 254
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 14/126 (11%)
Query: 28 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 87
G L + P E G+K + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 125 GKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 184
Query: 88 QVKTWFQNR--------LPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQ 139
QVKTW+QNR L G L S +K R K ++ + QLT E+ +A+
Sbjct: 185 QVKTWYQNRRMKWKKIVLQGGGLESP------TKPKGRPKKNSIPTSEQLTEQERAKDAE 238
Query: 140 RYLSTP 145
+ P
Sbjct: 239 KPAEVP 244
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 100 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 159
G L + P E G+K + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 125 GKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 184
Query: 160 QL 161
Q+
Sbjct: 185 QV 186
>sp|Q9ER42|BARX1_MOUSE Homeobox protein BarH-like 1 OS=Mus musculus GN=Barx1 PE=2 SV=1
Length = 254
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 28 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 87
G L + E G+K + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 125 GKLEAAGSGEPGAKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 184
Query: 88 QVKTWFQNR--------LPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQ 139
QVKTW+QNR L G L S +K R K ++ + QLT E+ E +
Sbjct: 185 QVKTWYQNRRMKWKKIVLQGGGLESP------TKPKGRPKKNSIPTSEQLTEQERAKETE 238
Query: 140 RYLSTP 145
+ TP
Sbjct: 239 KPAETP 244
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 100 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 159
G L + E G+K + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 125 GKLEAAGSGEPGAKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 184
Query: 160 QL 161
Q+
Sbjct: 185 QV 186
>sp|Q9W6D8|BARX1_CHICK Homeobox protein BarH-like 1 (Fragment) OS=Gallus gallus GN=BARX1
PE=2 SV=1
Length = 207
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 28 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 87
G L + E GSK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 78 GKLEAAGSGEPGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 137
Query: 88 QVKTWFQNR--------LPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQ 139
QVKTW+QNR L G L S +K R K ++ S QL+ E+ E +
Sbjct: 138 QVKTWYQNRRMKWKKIVLQGGGLESP------TKPKGRPKKNSIPSSEQLSEQERAKETE 191
Query: 140 RYLSTP 145
+ +P
Sbjct: 192 KPPESP 197
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 100 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 159
G L + E GSK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 78 GKLEAAGSGEPGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 137
Query: 160 QL 161
Q+
Sbjct: 138 QV 139
>sp|Q9DED6|BAX1B_CHICK Homeobox protein BarH-like 1b OS=Gallus gallus GN=BARX1B PE=2 SV=1
Length = 247
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 18/132 (13%)
Query: 28 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 87
G L P E GSK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 119 GKLEPGGP-ETGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 177
Query: 88 QVKTWFQNR--------LPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQ 139
QVKTW+QNR L G L S +K R K ++ S QL+ E+ +A+
Sbjct: 178 QVKTWYQNRRMKWKKIVLQGGGLESP------TKPKGRPKKNSIPSSEQLSEQERARDAE 231
Query: 140 R---YLSTPERV 148
+ L +P V
Sbjct: 232 KPPESLGSPAEV 243
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 100 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 159
G L P E GSK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+
Sbjct: 119 GKLEPGGP-ETGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQL 177
Query: 160 QL 161
Q+
Sbjct: 178 QV 179
>sp|Q503F2|BARX1_DANRE Homeobox protein BarH-like 1 OS=Danio rerio GN=barx1 PE=2 SV=2
Length = 248
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 14/109 (12%)
Query: 40 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR--- 96
SK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+ QVKTW+QNR
Sbjct: 130 SKTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK 189
Query: 97 -----LPFGSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQR 140
L G L S +K R K ++ + QL+ E+ EA R
Sbjct: 190 WKKIVLQGGGLESP------TKPKGRPKKNSIPTSEQLSEQERTREADR 232
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 112 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
SK + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+ Q+
Sbjct: 130 SKTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQV 179
>sp|Q8VIB5|BARH2_MOUSE BarH-like 2 homeobox protein OS=Mus musculus GN=Barhl2 PE=2 SV=2
Length = 384
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQVKTW+QNR
Sbjct: 228 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNR 280
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQ+
Sbjct: 228 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQV 273
>sp|Q9NY43|BARH2_HUMAN BarH-like 2 homeobox protein OS=Homo sapiens GN=BARHL2 PE=2 SV=2
Length = 387
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQVKTW+QNR
Sbjct: 231 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNR 283
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQ+
Sbjct: 231 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQV 276
>sp|O88181|BARH2_RAT BarH-like 2 homeobox protein OS=Rattus norvegicus GN=Barhl2 PE=2
SV=1
Length = 384
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQVKTW+QNR
Sbjct: 228 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNR 280
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ RKART FSDHQL LE+ FE Q+YLS +R++LA AL L++TQ+
Sbjct: 228 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQV 273
>sp|Q24256|BARH2_DROME Homeobox protein B-H2 OS=Drosophila melanogaster GN=B-H2 PE=1 SV=3
Length = 645
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
++RKART F+DHQL LEK FE Q+YLS +R+ELA L+LS+ QVKTW+QNR
Sbjct: 379 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNR 431
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
++RKART F+DHQL LEK FE Q+YLS +R+ELA L+LS+ Q+
Sbjct: 379 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQV 424
>sp|O08686|BARX2_MOUSE Homeobox protein BarH-like 2 OS=Mus musculus GN=Barx2 PE=2 SV=2
Length = 283
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 46 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQN-RLPFGSLFS 104
R++RT+F++ QL GLEK+F+ Q+YLSTP+R++LA +L L++ QVKTW+QN R+ + +
Sbjct: 138 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 197
Query: 105 TSPHELGSKHCRRRKARTVFSDHQLTGLEK---RFEAQRYLSTPERVE 149
E +K R K ++ + ++ EK + ++Q L + ER E
Sbjct: 198 KGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQELLESSERQE 245
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 38/44 (86%)
Query: 118 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
R++RT+F++ QL GLEK+F+ Q+YLSTP+R++LA +L L++ Q+
Sbjct: 138 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQV 181
>sp|P22544|BARH1_DROAN Homeobox protein B-H1 OS=Drosophila ananassae GN=B-H1 PE=2 SV=1
Length = 606
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 29 SLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQ 88
S+ S S ++ ++RKART F+DHQL LEK FE Q+YLS ER ELA L LS+ Q
Sbjct: 315 SIKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQ 374
Query: 89 VKTWFQNR 96
VKTW+QNR
Sbjct: 375 VKTWYQNR 382
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 101 SLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQ 160
S+ S S ++ ++RKART F+DHQL LEK FE Q+YLS ER ELA L LS+ Q
Sbjct: 315 SIKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQ 374
Query: 161 L 161
+
Sbjct: 375 V 375
>sp|Q9BZE3|BARH1_HUMAN BarH-like 1 homeobox protein OS=Homo sapiens GN=BARHL1 PE=2 SV=1
Length = 327
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 46 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQVKTW+QNR
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 118 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQ+
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQV 222
>sp|Q24255|BARH1_DROME Homeobox protein B-H1 OS=Drosophila melanogaster GN=B-H1 PE=2 SV=2
Length = 544
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
++RKART F+DHQL LEK FE Q+YLS ER ELA L LS+ QVKTW+QNR
Sbjct: 298 KQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNR 350
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
++RKART F+DHQL LEK FE Q+YLS ER ELA L LS+ Q+
Sbjct: 298 KQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQV 343
>sp|P63156|BARH1_RAT BarH-like 1 homeobox protein OS=Rattus norvegicus GN=Barhl1 PE=2
SV=1
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 46 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQVKTW+QNR
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 118 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQ+
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQV 222
>sp|P63157|BARH1_MOUSE BarH-like 1 homeobox protein OS=Mus musculus GN=Barhl1 PE=2 SV=1
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 46 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQVKTW+QNR
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 118 RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
RKART F+DHQL LE+ FE Q+YLS +R+ELA +L L++TQ+
Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQV 222
>sp|Q9UMQ3|BARX2_HUMAN Homeobox protein BarH-like 2 OS=Homo sapiens GN=BARX2 PE=1 SV=3
Length = 279
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQN-RLPFGSL 102
+ R++RT+F++ QL GLEK+F+ Q+YLSTP+R++LA +L L++ QVKTW+QN R+ + +
Sbjct: 132 KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKM 191
Query: 103 FSTSPHELGSKHCRRRKARTVFSDHQLTGLEK 134
E +K R K ++ + ++ EK
Sbjct: 192 VLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEK 223
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 79 ATALQLSETQVKTWFQNRLPFGSLFSTSPHELGSKHCRRRK---ARTVFSDHQLTGLEKR 135
A LS QV P G ++S E R++K +RT+F++ QL GLEK+
Sbjct: 92 GIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKK 151
Query: 136 FEAQRYLSTPERVELATALQLSETQL 161
F+ Q+YLSTP+R++LA +L L++ Q+
Sbjct: 152 FQKQKYLSTPDRLDLAQSLGLTQLQV 177
>sp|A6NCS4|NKX26_HUMAN Homeobox protein Nkx-2.6 OS=Homo sapiens GN=NKX2-6 PE=1 SV=1
Length = 301
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+RRK R +FS Q+ LE+RF+ QRYLS PER LA+ALQL+ TQVK WFQNR
Sbjct: 131 QRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNR 183
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+RRK R +FS Q+ LE+RF+ QRYLS PER LA+ALQL+ TQ+
Sbjct: 131 QRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQV 176
>sp|Q22910|HM31_CAEEL Homeobox protein ceh-31 OS=Caenorhabditis elegans GN=ceh-31 PE=4
SV=2
Length = 260
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Query: 34 SPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWF 93
SP +GSK + RKART+F+D QL LE FE Q+YLS +R+ELA + L++TQVKTW+
Sbjct: 85 SPTCVGSK--KARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWY 142
Query: 94 QNR 96
QNR
Sbjct: 143 QNR 145
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 106 SPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
SP +GSK + RKART+F+D QL LE FE Q+YLS +R+ELA + L++TQ+
Sbjct: 85 SPTCVGSK--KARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQV 138
>sp|Q22909|HM30_CAEEL Homeobox protein ceh-30 OS=Caenorhabditis elegans GN=ceh-30 PE=2
SV=2
Length = 237
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 8 PSPYLHKSDSFYITPQGLPFGSLFSTSPHELGSKHCRR-RKARTVFSDHQLTGLEKRFEA 66
PSP KSD F +P+ G SP GS C++ RKART+F+D QL LE FE
Sbjct: 63 PSPQSIKSD-FSTSPRASSPGGDRMGSP---GS--CKKSRKARTIFTDKQLQELENTFEK 116
Query: 67 QRYLSTPERVELATALQLSETQVKTWFQNR 96
Q+YLS +R++LA + L++TQVKTW+QNR
Sbjct: 117 QKYLSVQDRMDLAHRMGLTDTQVKTWYQNR 146
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 9/70 (12%)
Query: 101 SLFSTSP-------HELGSK-HCRR-RKARTVFSDHQLTGLEKRFEAQRYLSTPERVELA 151
S FSTSP +GS C++ RKART+F+D QL LE FE Q+YLS +R++LA
Sbjct: 70 SDFSTSPRASSPGGDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLA 129
Query: 152 TALQLSETQL 161
+ L++TQ+
Sbjct: 130 HRMGLTDTQV 139
>sp|A8XJD0|HM30_CAEBR Homeobox protein ceh-30 OS=Caenorhabditis briggsae GN=ceh-30 PE=3
SV=1
Length = 233
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 32 STSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKT 91
++SP + RKART+F+D QL LE FE Q+YLS +R++LA + LS+TQVKT
Sbjct: 75 ASSPDRNSPMSKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQVKT 134
Query: 92 WFQNR 96
W+QNR
Sbjct: 135 WYQNR 139
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 104 STSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
++SP + RKART+F+D QL LE FE Q+YLS +R++LA + LS+TQ+
Sbjct: 75 ASSPDRNSPMSKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQV 132
>sp|P22809|BAGP_DROME Homeobox protein bagpipe OS=Drosophila melanogaster GN=bap PE=2
SV=3
Length = 382
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 39 GSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
GS R++++R FS Q+ LE+RF QRYLS PER E+A +L+L+ETQVK WFQNR
Sbjct: 169 GSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNR 226
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 111 GSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
GS R++++R FS Q+ LE+RF QRYLS PER E+A +L+L+ETQ+
Sbjct: 169 GSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQV 219
>sp|Q91926|VENT1_XENLA Homeobox protein vent1 OS=Xenopus laevis GN=vent1 PE=1 SV=1
Length = 264
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 45 RRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+R+ RT F+ Q++ LE+ F QRYL PER +LAT+LQLSE QVKTWFQNR
Sbjct: 129 QRRLRTAFTPQQISKLEQAFNKQRYLGAPERKKLATSLQLSEIQVKTWFQNR 180
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 117 RRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+R+ RT F+ Q++ LE+ F QRYL PER +LAT+LQLSE Q+
Sbjct: 129 QRRLRTAFTPQQISKLEQAFNKQRYLGAPERKKLATSLQLSEIQV 173
>sp|Q623D4|VAB15_CAEBR Homeobox protein vab-15 OS=Caenorhabditis briggsae GN=vab-15 PE=3
SV=1
Length = 226
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
KH RK RT FS QL LE++F++++YLS ER E + +LQL+ETQVK WFQNR
Sbjct: 131 KHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNR 186
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
KH RK RT FS QL LE++F++++YLS ER E + +LQL+ETQ+
Sbjct: 131 KHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQV 179
>sp|Q09604|VAB15_CAEEL Homeobox protein vab-15 OS=Caenorhabditis elegans GN=vab-15 PE=2
SV=1
Length = 225
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
KH RK RT FS QL LE++F++++YLS ER E + +LQL+ETQVK WFQNR
Sbjct: 125 KHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNR 180
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
KH RK RT FS QL LE++F++++YLS ER E + +LQL+ETQ+
Sbjct: 125 KHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQV 173
>sp|P43688|NKX26_MOUSE Homeobox protein Nkx-2.6 OS=Mus musculus GN=Nkx2-6 PE=2 SV=2
Length = 289
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 45 RRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+RK+R +FS Q+ LE+RF+ QRYL+ PER LA+ALQL+ TQVK WFQNR
Sbjct: 123 QRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNR 174
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 117 RRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+RK+R +FS Q+ LE+RF+ QRYL+ PER LA+ALQL+ TQ+
Sbjct: 123 QRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQV 167
>sp|Q504H8|HMX3_DANRE Homeobox protein HMX3 OS=Danio rerio GN=hmx3 PE=2 SV=1
Length = 297
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 166 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 221
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 166 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 214
>sp|Q8JJ64|HMX3_XENLA Homeobox protein HMX3 OS=Xenopus laevis GN=hmx3 PE=1 SV=1
Length = 306
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 229
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 222
>sp|Q90XN9|HMX3B_ORYLA Homeobox protein HMX3-B OS=Oryzias latipes GN=hmx3b PE=2 SV=1
Length = 290
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 37 ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
E K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 158 ESDKKPCRKKKTRTVFSRSQVFQLESTFDIKRYLSSSERAGLAASLHLTETQVKIWFQNR 217
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 109 ELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
E K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 158 ESDKKPCRKKKTRTVFSRSQVFQLESTFDIKRYLSSSERAGLAASLHLTETQV 210
>sp|Q0P4W6|HMX3_XENTR Homeobox protein HMX3 OS=Xenopus tropicalis GN=hmx3 PE=2 SV=1
Length = 306
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 229
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 222
>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster GN=Hmx PE=2 SV=3
Length = 592
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 28 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 87
G S+SPH G+ R++K RTVFS Q+ LE F+ +RYLS+ ER LA +L+L+ET
Sbjct: 452 GPSDSSSPHGDGNSK-RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTET 510
Query: 88 QVKTWFQNR 96
QVK WFQNR
Sbjct: 511 QVKIWFQNR 519
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 100 GSLFSTSPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSET 159
G S+SPH G+ R++K RTVFS Q+ LE F+ +RYLS+ ER LA +L+L+ET
Sbjct: 452 GPSDSSSPHGDGNSK-RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTET 510
Query: 160 QL 161
Q+
Sbjct: 511 QV 512
>sp|Q90XP0|HMX3A_ORYLA Homeobox protein HMX3-A OS=Oryzias latipes GN=hmx3a PE=2 SV=1
Length = 303
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 171 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 226
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 171 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 219
>sp|O57601|HMX3_CHICK Homeobox protein HMX3 OS=Gallus gallus GN=HMX3 PE=2 SV=1
Length = 308
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 41 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 177 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 232
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 113 KHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
K CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 177 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 225
>sp|Q91284|DLX3_PLEWA Distal-less-like protein DLX-3 OS=Pleurodeles waltl GN=DLX3 PE=2
SV=1
Length = 274
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 38 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQN-R 96
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQVK WFQN R
Sbjct: 119 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR 178
Query: 97 LPFGSLFST--------SPHELGSKHCRRRKARTVFSDH 127
F L+ SP S C + TV+ ++
Sbjct: 179 SKFKKLYKNGEVPGMEHSPDNSDSMACNSPASPTVWDNN 217
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 110 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQ+
Sbjct: 119 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQV 170
>sp|P53770|DLX3_NOTVI Homeobox protein DLX-3 OS=Notophthalmus viridescens GN=DLX3 PE=2
SV=1
Length = 273
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 38 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQN-R 96
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQVK WFQN R
Sbjct: 118 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR 177
Query: 97 LPFGSLFST--------SPHELGSKHCRRRKARTVFSDH 127
F L+ SP S C + TV+ ++
Sbjct: 178 SKFKKLYKNGEVPGMEHSPDNSDSMACNSPASPTVWDNN 216
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 110 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQ+
Sbjct: 118 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQV 169
>sp|O60479|DLX3_HUMAN Homeobox protein DLX-3 OS=Homo sapiens GN=DLX3 PE=2 SV=1
Length = 287
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 38 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQVK WFQNR
Sbjct: 122 VNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNR 180
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 110 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQ+
Sbjct: 122 VNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQV 173
>sp|D2KQB0|HHEX_ASTMI Hematopoietically-expressed homeobox protein HHEX homolog
OS=Asterina miniata GN=hhex PE=2 SV=1
Length = 280
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+R+ + FS+ Q LEK+FE+Q+YLS PER +LA LQLSE QVKTWFQNR
Sbjct: 164 KRKGGQVRFSNDQTMELEKKFESQKYLSPPERKKLAKLLQLSERQVKTWFQNR 216
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+R+ + FS+ Q LEK+FE+Q+YLS PER +LA LQLSE Q+
Sbjct: 164 KRKGGQVRFSNDQTMELEKKFESQKYLSPPERKKLAKLLQLSERQV 209
>sp|Q64205|DLX3_MOUSE Homeobox protein DLX-3 OS=Mus musculus GN=Dlx3 PE=2 SV=1
Length = 287
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 38 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQVK WFQNR
Sbjct: 122 VNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNR 180
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 110 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQ+
Sbjct: 122 VNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQV 173
>sp|P97503|NKX32_MOUSE Homeobox protein Nkx-3.2 OS=Mus musculus GN=Nkx3-2 PE=1 SV=2
Length = 333
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
R++++R FS Q+ LE+RF QRYLS PER +LA +L+L+ETQVK WFQNR
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNR 257
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
R++++R FS Q+ LE+RF QRYLS PER +LA +L+L+ETQ+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQV 250
>sp|Q15270|NKX11_HUMAN NK1 transcription factor-related protein 1 OS=Homo sapiens
GN=NKX1-1 PE=2 SV=2
Length = 411
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 40 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
SK + R+ART F+ QL LE +F+A RYLS ER+ LA +L L+ETQVK WFQNR
Sbjct: 254 SKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNR 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 112 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
SK + R+ART F+ QL LE +F+A RYLS ER+ LA +L L+ETQ+
Sbjct: 254 SKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQV 303
>sp|P42581|HMX3_MOUSE Homeobox protein HMX3 OS=Mus musculus GN=Hmx3 PE=1 SV=3
Length = 356
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 43 CRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 278
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 115 CRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 271
>sp|P78367|NKX32_HUMAN Homeobox protein Nkx-3.2 OS=Homo sapiens GN=NKX3-2 PE=2 SV=2
Length = 333
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 44 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
R++++R FS Q+ LE+RF QRYLS PER +LA +L+L+ETQVK WFQNR
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNR 257
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 116 RRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
R++++R FS Q+ LE+RF QRYLS PER +LA +L+L+ETQ+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQV 250
>sp|A6NHT5|HMX3_HUMAN Homeobox protein HMX3 OS=Homo sapiens GN=HMX3 PE=2 SV=1
Length = 357
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 43 CRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQVK WFQNR
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNR 278
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 115 CRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
CR++K RTVFS Q+ LE F+ +RYLS+ ER LA +L L+ETQ+
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 271
>sp|P56407|HM09_CAEEL Homeobox protein ceh-9 OS=Caenorhabditis elegans GN=ceh-9 PE=4 SV=2
Length = 147
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 34 SPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWF 93
SP E K +R+KART FS Q+ LEK+FEA++YLS+ +R ELA L ++ETQVK WF
Sbjct: 60 SPIEKCQK-TKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWF 118
Query: 94 QNR 96
QNR
Sbjct: 119 QNR 121
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 106 SPHELGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
SP E K +R+KART FS Q+ LEK+FEA++YLS+ +R ELA L ++ETQ+
Sbjct: 60 SPIEKCQK-TKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQV 114
>sp|O70218|HMX1_MOUSE Homeobox protein HMX1 OS=Mus musculus GN=Hmx1 PE=2 SV=1
Length = 332
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 40 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQNR 96
++ RR+K RTVFS Q+ LE F+ +RYLS+ ER LA +LQL+ETQVK WFQNR
Sbjct: 186 ARGGRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNR 242
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 112 SKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
++ RR+K RTVFS Q+ LE F+ +RYLS+ ER LA +LQL+ETQ+
Sbjct: 186 ARGGRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQV 235
>sp|Q01702|DLX3B_DANRE Homeobox protein Dlx3b OS=Danio rerio GN=dlx3b PE=2 SV=1
Length = 269
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 38 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQVKTWFQN-R 96
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQVK WFQN R
Sbjct: 118 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR 177
Query: 97 LPFGSLFST-------SPHELGSKHCRRRKARTVFSDH 127
F L+ SP+ S C + V+ ++
Sbjct: 178 SKFKKLYKNGEVPLEHSPNASDSMACNSPPSPAVWDNN 215
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 110 LGSKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELATALQLSETQL 161
+ K + RK RT++S +QL L++RF+ +YL+ PER ELA L L++TQ+
Sbjct: 118 VNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQV 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,217,627
Number of Sequences: 539616
Number of extensions: 2075050
Number of successful extensions: 6749
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4628
Number of HSP's gapped (non-prelim): 2138
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)