BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17011
(321 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383865665|ref|XP_003708293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Megachile
rotundata]
Length = 368
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/367 (53%), Positives = 250/367 (68%), Gaps = 47/367 (12%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M STEQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASTEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQG-NEENTPDISNTDQTSVQQ 179
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN++ N N +N+ S
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNVEPENASNATSYNNSQNVSAPA 180
Query: 180 QPSPQPTTSNAI-------KNQLSPA------VPKSPEARPSSAAS-SSTTKVSKKTAKS 225
P+P T + + +N +P+ +PK P+ + S S + ++ +T
Sbjct: 181 TPNPSNTANQSDSSQSTTSRNSTTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGGG 240
Query: 226 DVMT------------------------SELETDDT---SETDDKISTVESATDGEVDHL 258
D M +E+ D++ + ++ I +++ + VDHL
Sbjct: 241 DSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYIKTTANATVDHL 300
Query: 259 TKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLE 313
+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ++DK+W+ +PLE
Sbjct: 301 SKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQVNDKFWRVNRPLE 360
Query: 314 VYYSWKK 320
+YYSWKK
Sbjct: 361 MYYSWKK 367
>gi|307174595|gb|EFN65017.1| E3 ubiquitin-protein ligase RING2 [Camponotus floridanus]
Length = 379
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/378 (52%), Positives = 251/378 (66%), Gaps = 58/378 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE--------NTPDIS-- 170
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN +E NTP++S
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTPNVSAP 180
Query: 171 -------NTDQTSVQQQPSPQPTTSNAI--KNQLSPA------VPKSPEARPSSAAS-SS 214
N S Q + P S +N +P+ +PK+P+ + S S +
Sbjct: 181 TTPNPSTNVANQSDSSQSATGPLNSGGTTSRNSTTPSPNPANQIPKAPKRQKSFQNSEND 240
Query: 215 TTKVSKKTAKSDVMT------------------------SELETDDT---SETDDKISTV 247
++ +T D M +E+ D++ + ++ I +
Sbjct: 241 SSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYI 300
Query: 248 ESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQIH 302
++ + VDHL+KYL MRL L+ +++ +S NF IY++PSS ++L G+Q+LRQ++
Sbjct: 301 KTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSSGQLVVLNGSQTLRQVN 360
Query: 303 DKYWKSEKPLEVYYSWKK 320
DK+W+ +PLE++YSWKK
Sbjct: 361 DKFWRVNRPLEMFYSWKK 378
>gi|332021896|gb|EGI62232.1| E3 ubiquitin-protein ligase RING2 [Acromyrmex echinatior]
Length = 379
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/378 (52%), Positives = 243/378 (64%), Gaps = 58/378 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE--------NTPDIS-- 170
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN +E NTP+IS
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTPNISAP 180
Query: 171 -----------------------NTDQTSVQQQPSPQPTTSNAI------KNQLSPAVPK 201
N+ T+ + +P P +N I + L +
Sbjct: 181 TTPNPSTNVANQSDSSQSATGPLNSGGTTSRNSTTPSPNPANQISKPSKRQKSLQNSEND 240
Query: 202 SPEARPSSAASSSTTKVSKKTAKSDVMTSELE----------TDDTSET----DDKISTV 247
S A + S + +M +E+E D S ++ I +
Sbjct: 241 SSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYI 300
Query: 248 ESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQIH 302
++ + VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ++
Sbjct: 301 KTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQVN 360
Query: 303 DKYWKSEKPLEVYYSWKK 320
DK+W+ +PLE+YYSWKK
Sbjct: 361 DKFWRVNRPLEMYYSWKK 378
>gi|322796367|gb|EFZ18908.1| hypothetical protein SINV_06659 [Solenopsis invicta]
Length = 379
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/378 (52%), Positives = 243/378 (64%), Gaps = 58/378 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE--------NTPDIS-- 170
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN +E NTP+IS
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTPNISAP 180
Query: 171 -----------------------NTDQTSVQQQPSPQPTTSNAI------KNQLSPAVPK 201
N+ T+ + +P P +N I + L +
Sbjct: 181 TTPNPSSNVANQSDSSQSATGPLNSGGTTSRNSTTPSPNPANQIPKPSKRQKSLQNSEND 240
Query: 202 SPEARPSSAASSSTTKVSKKTAKSDVMTSELE----------TDDTSET----DDKISTV 247
S A + S + +M +E+E D S ++ I +
Sbjct: 241 SSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYI 300
Query: 248 ESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQIH 302
++ + VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ++
Sbjct: 301 KTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQVN 360
Query: 303 DKYWKSEKPLEVYYSWKK 320
DK+W+ +PLE+YYSWKK
Sbjct: 361 DKFWRVNRPLEMYYSWKK 378
>gi|340724527|ref|XP_003400633.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Bombus
terrestris]
gi|380021048|ref|XP_003694386.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 1 [Apis
florea]
Length = 380
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/379 (52%), Positives = 249/379 (65%), Gaps = 59/379 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ-----------GNEEN---- 165
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN N +N
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNANESENASNATSYNNSQNASAP 180
Query: 166 -TPDISNTDQTSVQQQPSPQP--------TTSNAIKNQLSPA--VPKSPEARPSSAAS-S 213
TP+ +N S Q + P T+ N+ +PA +PK P+ + S S +
Sbjct: 181 ATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPNPANQIPKPPKRQKSLQNSEN 240
Query: 214 STTKVSKKTAKSDVMT------------------------SELETDDT---SETDDKIST 246
++ +T D M +E+ D++ + ++ I
Sbjct: 241 DSSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRY 300
Query: 247 VESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQI 301
+++ + VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ+
Sbjct: 301 IKTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQV 360
Query: 302 HDKYWKSEKPLEVYYSWKK 320
+DK+W+ +PLE+YYSWKK
Sbjct: 361 NDKFWRVNRPLEMYYSWKK 379
>gi|66523966|ref|XP_393984.2| PREDICTED: e3 ubiquitin-protein ligase RING2-A isoform 1 [Apis
mellifera]
Length = 403
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/379 (52%), Positives = 249/379 (65%), Gaps = 59/379 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 24 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 83
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 84 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 143
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ-----------GNEEN---- 165
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN N +N
Sbjct: 144 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNANESENASNATSYNNSQNASAP 203
Query: 166 -TPDISNTDQTSVQQQPSPQP--------TTSNAIKNQLSPA--VPKSPEARPSSAAS-S 213
TP+ +N S Q + P T+ N+ +PA +PK P+ + S S +
Sbjct: 204 ATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPNPANQIPKPPKRQKSLQNSEN 263
Query: 214 STTKVSKKTAKSDVMT------------------------SELETDDT---SETDDKIST 246
++ +T D M +E+ D++ + ++ I
Sbjct: 264 DSSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRY 323
Query: 247 VESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQI 301
+++ + VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ+
Sbjct: 324 IKTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQV 383
Query: 302 HDKYWKSEKPLEVYYSWKK 320
+DK+W+ +PLE+YYSWKK
Sbjct: 384 NDKFWRVNRPLEMYYSWKK 402
>gi|193643594|ref|XP_001942602.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/338 (57%), Positives = 244/338 (72%), Gaps = 24/338 (7%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + G TK+WELS+YEL+R+PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASADPMGLTKTWELSLYELHRSPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVLEKLNKSHSQA LVQSINEGIKLQ+Q+RLQRTKKN Q E N + S++ +
Sbjct: 121 TRVLEKLNKSHSQANLVQSINEGIKLQTQNRLQRTKKN-QHEELN--ESSSSTTSKPSNS 177
Query: 181 PSPQPTTSNAIKNQLS---PAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELE---- 233
S T ++ +++ +V S + P+S +S T+K V E+E
Sbjct: 178 SSRDNVTRTMVQTKVAKKMKSVMISEKEGPASTVDTSDITECDGTSKG-VSVDEIELVFK 236
Query: 234 ---TDDTSET-------DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS--NFGI 280
T+ S+ ++ + +++ + VDHL+KYL MRL L+ G ++ + NF I
Sbjct: 237 PHPTEMASDNQLIRVLKENSVRYIKTTANATVDHLSKYLAMRLTLDLGPELPERALNFLI 296
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSW 318
YV+P+++ F+ L GNQ+LR +HDK+WK KPLE++YS+
Sbjct: 297 YVAPTADQFVPLSGNQTLRNVHDKFWKVNKPLEMFYSF 334
>gi|380021050|ref|XP_003694387.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 2 [Apis
florea]
Length = 369
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/371 (53%), Positives = 250/371 (67%), Gaps = 54/371 (14%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNE-ENTPDISNTDQTSVQQ 179
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN NE EN + ++ + +
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKN--ANESENASNATSYNNSQNAS 178
Query: 180 QPSPQPTTSNAI-----------KNQLSPA------VPKSPEARPSSAASSS-TTKVSKK 221
P+ P +NA +N +P+ +PK P+ + S S + ++ +
Sbjct: 179 APA-TPNATNAANQSDSSQSTTSRNSTTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAE 237
Query: 222 TAKSDVMT------------------------SELETDDT---SETDDKISTVESATDGE 254
T D M +E+ D++ + ++ I +++ +
Sbjct: 238 TGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYIKTTANAT 297
Query: 255 VDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSE 309
VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ++DK+W+
Sbjct: 298 VDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQVNDKFWRVN 357
Query: 310 KPLEVYYSWKK 320
+PLE+YYSWKK
Sbjct: 358 RPLEMYYSWKK 368
>gi|242019424|ref|XP_002430161.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
gi|212515252|gb|EEB17423.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
Length = 352
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/354 (57%), Positives = 239/354 (67%), Gaps = 40/354 (11%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
++S EQ G K+WELS+YEL RTPQEAITD+TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 3 LSSQEQIGLNKTWELSLYELQRTPQEAITDHTEIAVSPRSLHSELMCPICLDMLKKTMTT 62
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 63 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 122
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDIS--------NT 172
RV+ K+NKSHSQAALV SI EGIKLQSQ+R R KN G+ ++ +S N
Sbjct: 123 ERVMAKINKSHSQAALVSSITEGIKLQSQNRPNR--KNKIGDADSVDSLSSQPSAANQNL 180
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSP--------AVPKSPEARPSS----AASSSTTKVSK 220
SVQ P +TS ++NQ S + P S RP S + S + S
Sbjct: 181 STNSVQ----PPTSTSFGLENQTSGQPTLNIPCSAPSSSRTRPPSLSDDSPGSPDSAGSS 236
Query: 221 KTAKSDVM--------TSELETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG-- 270
++ +D + T L D I +++ +DHL+KYL MRL L+
Sbjct: 237 ESLAADQIELVFMPHPTEMLADPLMRRLKDSIRYIKTPDHATIDHLSKYLAMRLTLDNMD 296
Query: 271 SDICDS----NFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
SD+ DS NF IY++PS ILL GNQ+LRQ++DKYWK++KPLE+YYS K
Sbjct: 297 SDLSDSLGLVNFCIYIAPSPGQLILLTGNQTLRQVNDKYWKADKPLEMYYSINK 350
>gi|350425025|ref|XP_003493989.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Bombus
impatiens]
Length = 380
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 198/379 (52%), Positives = 249/379 (65%), Gaps = 59/379 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+AITD+TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDAITDSTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ-----------GNEEN---- 165
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN N +N
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNANESENASNATSYNNSQNASAP 180
Query: 166 -TPDISNTDQTSVQQQPSPQP--------TTSNAIKNQLSPA--VPKSPEARPSSAAS-S 213
TP+ +N S Q + P T+ N+ +PA +PK P+ + S S +
Sbjct: 181 ATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPNPANQIPKPPKRQKSLQNSEN 240
Query: 214 STTKVSKKTAKSDVMT------------------------SELETDDT---SETDDKIST 246
++ +T D M +E+ D++ + ++ I
Sbjct: 241 DSSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRY 300
Query: 247 VESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQI 301
+++ + VDHL+KYL MRL L+ +++ +S NF IY++PS ++L G+Q+LRQ+
Sbjct: 301 IKTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQV 360
Query: 302 HDKYWKSEKPLEVYYSWKK 320
+DK+W+ +PLE+YYSWKK
Sbjct: 361 NDKFWRVNRPLEMYYSWKK 379
>gi|328707142|ref|XP_001949156.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 241/341 (70%), Gaps = 30/341 (8%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + +G TK+WELS+YEL+R+PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASADPTGVTKTWELSLYELHRSPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYP+RDEYEAHQ
Sbjct: 61 KECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPNRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK--NIQGNEEN---TPDISNTDQT 175
RVLEKLN SHSQA LVQSINEGIKLQ+Q+RLQRTKK N + NE N TP SN+
Sbjct: 121 TRVLEKLNNSHSQANLVQSINEGIKLQTQNRLQRTKKPQNEELNESNSSTTPKPSNSSGQ 180
Query: 176 SVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSK-----KTAKSDVMTS 230
+ Q + +K +V S + PSS TT +++ K +D +
Sbjct: 181 DNVTRTMVQTKVAKKMK-----SVMISEKEGPSSTV--DTTDITECDGAPKGVSADEIEL 233
Query: 231 ELETDDTSETDDK----------ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS--N 277
+ T T+D I +++ + VDHL+KYL MRL ++ GS++ + N
Sbjct: 234 VFKPHPTEMTNDNQLIRVLKENSIRYIKTTANATVDHLSKYLAMRLTVDLGSELTEQTLN 293
Query: 278 FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSW 318
F IYV+ +++ + L G+Q+LR +HDKYWK KPLE++YS+
Sbjct: 294 FLIYVASTADQLVPLNGSQTLRNVHDKYWKVNKPLEMFYSF 334
>gi|345486958|ref|XP_001608228.2| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nasonia
vitripennis]
Length = 379
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/378 (52%), Positives = 242/378 (64%), Gaps = 58/378 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M STEQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASTEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQG--NEENTPDISNTDQTSVQ 178
RVL KLN SHSQAALV SI EGIKLQSQ+R QR++KN N NT +NT S
Sbjct: 121 ERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRSRKNANEPENTNNTASYNNTPNVSAP 180
Query: 179 QQPSPQPTTSN-------AI-----------KNQLSPA-VPKSPE--------------- 204
P+P +N AI +N +P+ VP +P+
Sbjct: 181 TTPNPAVIAANQSDSSQGAIGQSSNGGSTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDS 240
Query: 205 --ARPSSAASSSTTKVSKKTAKSDVMTSELE----------TDDTSET----DDKISTVE 248
A + + S + + +M +E+E D S ++ I ++
Sbjct: 241 SSAEAETGGNDSMVDTEGEGSSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYIK 300
Query: 249 SATDGEVDHLTKYLTMRLRLEGSDICDS------NFGIYVSPSSNNFILLPGNQSLRQIH 302
+ + VDHL+KYL MRL L+ S NF IY++P++ ++L G+Q+LRQ+
Sbjct: 301 TTANATVDHLSKYLAMRLTLDLDTELLSESDRLLNFCIYIAPTTGQLVVLSGSQTLRQVK 360
Query: 303 DKYWKSEKPLEVYYSWKK 320
DK+W+ +PLE+YYSWKK
Sbjct: 361 DKFWRVNRPLEMYYSWKK 378
>gi|345486956|ref|XP_003425596.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 3 [Nasonia
vitripennis]
Length = 389
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 200/388 (51%), Positives = 242/388 (62%), Gaps = 68/388 (17%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M STEQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASTEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--GNEENTPDISNTDQTSVQ 178
RVL KLN SHSQAALV SI EGIKLQSQ+R QR++KN N NT +NT S
Sbjct: 121 ERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRSRKNANEPENTNNTASYNNTPNVSAP 180
Query: 179 QQPSP--------------------------QPTTSNAI--KNQLSPA-VPKSPE----- 204
P+P TTSN +N +P+ VP +P+
Sbjct: 181 TTPNPAVIAANQSDSSQGAIGQSSNGGSRENHSTTSNGTTSRNSTTPSPVPSNPKPAKRQ 240
Query: 205 ------------ARPSSAASSSTTKVSKKTAKSDVMTSELE----------TDDTSET-- 240
A + + S + + +M +E+E D S
Sbjct: 241 KSLQNSENDSSSAEAETGGNDSMVDTEGEGSSEPLMLNEIELVFKPHPTEMAGDNSLIKA 300
Query: 241 --DDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDS------NFGIYVSPSSNNFILL 292
++ I +++ + VDHL+KYL MRL L+ S NF IY++P++ ++L
Sbjct: 301 LKENSIRYIKTTANATVDHLSKYLAMRLTLDLDTELLSESDRLLNFCIYIAPTTGQLVVL 360
Query: 293 PGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
G+Q+LRQ+ DK+W+ +PLE+YYSWKK
Sbjct: 361 SGSQTLRQVKDKFWRVNRPLEMYYSWKK 388
>gi|345486954|ref|XP_003425595.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nasonia
vitripennis]
Length = 401
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 249/400 (62%), Gaps = 80/400 (20%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M STEQ G K+WELS+YEL+RTPQ+AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASTEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNE--------ENTPDI--- 169
RVL KLN SHSQAALV SI EGIKLQSQ+R QR++KN E NTP++
Sbjct: 121 ERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRSRKNANEPENTNNTASYNNTPNVSAP 180
Query: 170 ------------SNTDQTSVQQQPS--------------PQPTTSNAI-----KNQLSPA 198
S++ Q ++ Q + PQP+ S A+ +N +P+
Sbjct: 181 TTPNPAVIAANQSDSSQGAIGQSSNGGSRENHSTTSNGVPQPSISPAVSGTTSRNSTTPS 240
Query: 199 -VPKSPE-----------------ARPSSAASSSTTKVSKKTAKSDVMTSELE------- 233
VP +P+ A + + S + + +M +E+E
Sbjct: 241 PVPSNPKPAKRQKSLQNSENDSSSAEAETGGNDSMVDTEGEGSSEPLMLNEIELVFKPHP 300
Query: 234 ---TDDTSET----DDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDS------NFGI 280
D S ++ I +++ + VDHL+KYL MRL L+ S NF I
Sbjct: 301 TEMAGDNSLIKALKENSIRYIKTTANATVDHLSKYLAMRLTLDLDTELLSESDRLLNFCI 360
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
Y++P++ ++L G+Q+LRQ+ DK+W+ +PLE+YYSWKK
Sbjct: 361 YIAPTTGQLVVLSGSQTLRQVKDKFWRVNRPLEMYYSWKK 400
>gi|307204964|gb|EFN83503.1| E3 ubiquitin-protein ligase RING1 [Harpegnathos saltator]
Length = 399
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 197/398 (49%), Positives = 251/398 (63%), Gaps = 78/398 (19%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ G K+WELS+YEL+RTPQ+ ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASAEQVGLNKTWELSLYELHRTPQDVITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE---------------N 165
RVL KLNKSHSQAALV SI EGIKLQSQ+R QR++KN +E
Sbjct: 121 ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTNTSGPT 180
Query: 166 TPDISN--TDQTSVQQQPSP-----------------QPTTSNAI-----KNQLSPA--- 198
TP+ S +Q+ Q P QP +S A+ +N +P+
Sbjct: 181 TPNASANAANQSDSSQSTGPLNSGGISSSSQNANSISQPASSPAVSGTTSRNSTTPSPNP 240
Query: 199 ---VPKSPEARPSSAAS-SSTTKVSKKTAKSDVMT------------------------S 230
+PK P+ + S S + ++ +T D M +
Sbjct: 241 ANQIPKPPKRQKSLQNSENDSSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPT 300
Query: 231 ELETDDT---SETDDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYV 282
E+ D++ + ++ I +++ + VDHL+KYL MRL L+ +++ +S NF IY+
Sbjct: 301 EMAGDNSLIKALKENSIRYIKTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYI 360
Query: 283 SPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+PS ++L G+Q+LRQ++D++W+ +PLE++YSWKK
Sbjct: 361 APSPGQLVVLSGSQTLRQVNDRFWRVNRPLEMFYSWKK 398
>gi|332372788|gb|AEE61536.1| unknown [Dendroctonus ponderosae]
Length = 382
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/381 (51%), Positives = 242/381 (63%), Gaps = 61/381 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MT++EQ G K+WELS+YEL+RTPQE ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MTTSEQIGLNKTWELSLYELHRTPQEVITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCS+CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLI+KIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSECIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLIAKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ----------GNEENTPDIS 170
+V+ KLN+ HS+ A VQSINEGIKLQSQ+R R +K + G T +
Sbjct: 121 EKVMAKLNEFHSREAFVQSINEGIKLQSQNRAPRGRKPNETVTSEPQGETGTTAGTSENV 180
Query: 171 NTDQT------SVQQQPSPQPTTSNAIKNQLSPAVPKSP--------------EARPSSA 210
N +QT + +P T NA N +P+ +P + RP SA
Sbjct: 181 NNNQTPSVPVTNANPPNTPVSTGQNATPNSPAPSGRSTPCDPPSPVSSSVSSIKRRPKSA 240
Query: 211 ASSSTTKVSKKTAKSDVMTSELETDDTSET--------------------------DDKI 244
+S ++ S TA+++ ++ E T ++ I
Sbjct: 241 MTSERSEESDSTAQTEQTDTDGEGPSEPHTLNEIELVFKPHPTEMSGDNPLVKALKENSI 300
Query: 245 STVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLR 299
+++ + VDHL KYL MRL L+ S + S NF IY+SPS+ ++ L GNQ+L
Sbjct: 301 RYIKTTANATVDHLHKYLAMRLTLDLESQLSPSHSLLNFCIYISPSAGQYVQLNGNQTLG 360
Query: 300 QIHDKYWKSEKPLEVYYSWKK 320
Q++DKYWK KPLE+YYSWKK
Sbjct: 361 QVNDKYWKENKPLEMYYSWKK 381
>gi|193700165|ref|XP_001946738.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 338
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 234/340 (68%), Gaps = 25/340 (7%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + G K+WELS+YEL+RTPQEAITD+TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASADLLGLNKTWELSLYELHRTPQEAITDSTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQG--NEENTPDI--------- 169
RVLEKLNKSHSQA LVQSINEGIK+Q+Q+RLQR+KKN Q NE ++ +
Sbjct: 121 TRVLEKLNKSHSQANLVQSINEGIKIQTQNRLQRSKKNQQDELNESSSSTLKTPSNNLGL 180
Query: 170 --SNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDV 227
N +T VQ + + + T +N ++ SS V +
Sbjct: 181 GKDNVTRTVVQAKVAKKLKTVMISENDGPASLSADRSDITECDGSSRGVSVDEIELVFKP 240
Query: 228 MTSELETDDT---SETDDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDS------NF 278
+E+ +D+ ++ + +++ + VDHL+KYL MRL L D+ +F
Sbjct: 241 HPTEMGSDNQLIRVLKENSVRYIKTTANATVDHLSKYLAMRLTL---DLVPELPERALSF 297
Query: 279 GIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSW 318
IYVSP+S+ ++ L GNQ+L Q+H+KYWK KPLE++YS+
Sbjct: 298 LIYVSPTSDQYVPLNGNQTLEQVHEKYWKENKPLEMFYSF 337
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/348 (53%), Positives = 237/348 (68%), Gaps = 32/348 (9%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + SG KSWELS+YEL RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK TMTT
Sbjct: 1 MASVDASGANKSWELSLYELQRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFD+LI+KIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDMLIAKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVL L+KSHSQ+AL+ SI EG+K+QSQ+R R +KN NE I+ T S
Sbjct: 121 ERVLANLSKSHSQSALLNSIEEGMKIQSQNRATRIRKNAPENETAN-SITTTPNVSAPST 179
Query: 181 PSPQPT----------TSNAIKNQLSPAVPKSP------------EARPSSAASSSTTKV 218
P+P + ++N +N+ + + + P ++ PS + S ++
Sbjct: 180 PTPTESVPSSKKKPKLSTNLSENESTGSGAEGPSDHGATEKLCEEQSGPSCSGGKSFNEI 239
Query: 219 SKKTAKSDVMTSELETDD---TSETDDKISTVESATDGEVDHLTKYLTMRLRLE-GSDIC 274
V E+ D+ + ++ I +++ ++ V+HL+KYL MRL L+ S+I
Sbjct: 240 ELVFKPHPV---EMGNDNDLIKALKENSIRYIKTTSNATVEHLSKYLAMRLTLDLESEIP 296
Query: 275 DS--NFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
DS NF IY+SP N F++L G Q+L +++KYWKS +PLE++YSWKK
Sbjct: 297 DSLTNFCIYISPGPNQFVVLSGMQTLDDVNEKYWKSNQPLEMFYSWKK 344
>gi|357620029|gb|EHJ72363.1| putative ring finger protein 2 isoform 1 [Danaus plexippus]
Length = 377
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/388 (51%), Positives = 243/388 (62%), Gaps = 80/388 (20%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M+STE S K+WELS+YEL+RTPQE ITD TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MSSTEPSQN-KTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 59
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 60 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 119
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI-----------------QGNE 163
RVL K+N SHSQA+LV SI EGIKLQSQ+R QR +KN G+
Sbjct: 120 ERVLAKINMSHSQASLVNSITEGIKLQSQNRPQRARKNHDDNSNASNSNNNTEPPQNGSS 179
Query: 164 ENTPDISNTDQTSVQQQPS-PQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKT 222
+ P D TS P+ P +TSN +V +P PS+ +S S + K
Sbjct: 180 SSVPK----DSTSSAANPTTPGQSTSNPA------SVRSTPSPVPSNISSVSKNTSTTKR 229
Query: 223 AKSDVMT-----------------SELETDDTSET------------------------- 240
AKS ++T + ++T+ SE
Sbjct: 230 AKS-ILTSERSEGSESSDSRTEGENSMDTEGESEPLNPNEIELVFKPHPTEMTGDNQLMR 288
Query: 241 ---DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILL 292
D + +++ + VDHL+KYL MRL L+ +++ ++ NF IYV+PS F+ L
Sbjct: 289 ALRDSSVRYLKTTANASVDHLSKYLAMRLTLDLDAELPETYRLLNFCIYVAPSPGQFVPL 348
Query: 293 PGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
G+Q+LRQI+DK+WK KPLE+YYSWKK
Sbjct: 349 AGSQTLRQINDKFWKVNKPLEMYYSWKK 376
>gi|193610656|ref|XP_001946247.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/341 (54%), Positives = 229/341 (67%), Gaps = 30/341 (8%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + + TK WELS+YEL RTPQE ITD+TEIAVSPRS+ +ELMCPICLD+LKKTMT
Sbjct: 1 MASADSTDLTKMWELSLYELYRTPQEPITDDTEIAVSPRSIQNELMCPICLDVLKKTMTA 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFDL+ISKIYP RDEYEAHQ
Sbjct: 61 KECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDLIISKIYPDRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVLEKLNKSHSQA LVQSINEGIKLQ+Q+R QR KKN Q E N +S TS
Sbjct: 121 TRVLEKLNKSHSQANLVQSINEGIKLQTQNRQQRIKKN-QREELNKSSLST---TSTHLN 176
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKV-SKKTAKSDVMTSELETDDTSE 239
S Q N I+ + V K ++ S V + T + D + + D+
Sbjct: 177 SSSQ---DNVIRTMVQTNVAKMMKSVMILEKERSALTVDTLDTIECDGTSKSVSVDEKEI 233
Query: 240 T-------------------DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS--N 277
++ + +++ + VDHL+KYL M+L ++ GS+I + N
Sbjct: 234 VLKPHPTVIARDNPFIRVLKENSVRYIKTTANATVDHLSKYLAMQLIIDHGSEIPERALN 293
Query: 278 FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSW 318
F IYV+P++N F+ L GNQ+LR +HDK+WK KPLE++YS+
Sbjct: 294 FSIYVAPTANQFVPLKGNQTLRTVHDKFWKVNKPLEMFYSF 334
>gi|319803023|ref|NP_001188361.1| E3 ubiquitin-protein ligase RING1 [Bombyx mori]
gi|317175909|dbj|BAJ54070.1| sex combs extra [Bombyx mori]
Length = 377
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/380 (52%), Positives = 246/380 (64%), Gaps = 64/380 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M+STE S K+WELS+YEL+RTPQE ITD TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MSSTEPS-QNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 59
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 60 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 119
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
VL KL+ SHSQA+LV SI EGIKLQSQ+R QR++KN ++E++ ++ Q
Sbjct: 120 ELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSRKN---HDESSNASNSNGNVETAQN 176
Query: 181 PSPQPTTSNAIKNQLSPA-----------VPKSPEARPSSAAS----SSTTKVSK----- 220
S T + + +PA V +P PS+ +S +STTK +K
Sbjct: 177 GSNSATPKDGTSSSGNPAQSGQSTSNPASVRSTPSPVPSNVSSVSKNTSTTKRAKSVLTS 236
Query: 221 -----------KTAKSDVMTSELE-----------------TDDTSET-------DDKIS 245
+T + M +E E T+ T + D+ +
Sbjct: 237 ERSEESESSDGRTEGENSMDTEGEGEPLNPNEIELVFKPHPTEMTGDNQLMRALCDNSVR 296
Query: 246 TVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQ 300
+++ + VDHL+KYL MRL L+ +++ ++ NF IYV+PS F+LL G+Q+LRQ
Sbjct: 297 YLKTTPNASVDHLSKYLAMRLTLDLDAELPEALRLLNFCIYVAPSPGQFVLLAGSQTLRQ 356
Query: 301 IHDKYWKSEKPLEVYYSWKK 320
I DK+WK KPLE++YSWKK
Sbjct: 357 IIDKFWKVNKPLEMFYSWKK 376
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/385 (48%), Positives = 240/385 (62%), Gaps = 75/385 (19%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ RVL K N+S
Sbjct: 70 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKFNQS 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKN------------IQGNEENTPDISNTDQTSVQ 178
HSQ ALV SINEGIKLQSQ+R R +K+ + TP ++N +Q +V
Sbjct: 130 HSQQALVHSINEGIKLQSQNRPNRKQKSENDLSAAAAAATNSSSASATPVVANANQPAVP 189
Query: 179 QQPSPQPTTSNAIKNQLS-------------PAVPKSPEARPSSAASSSTTKVSKKT--- 222
P T+N + S P+V +P PS+ +S+S K ++
Sbjct: 190 STNGTVPETANREGSSNSQAGGESVPPLSNPPSVRSTPSPVPSNVSSASKAKRARSVLTS 249
Query: 223 -------------AKSDVMTSELETDDTSET----------------------------- 240
+++ S L+T+ +
Sbjct: 250 EKSEESESNSEMDGRTEENDSNLDTEGEGNSEHGSDEIELVFKPHPTEMAGDNPLLKALK 309
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
++ + +++ ++ VDHL+KYL MRL L+ +++ ++ NF IY++P + ++L GN
Sbjct: 310 ENSVRYIKTTSNATVDHLSKYLAMRLTLDLETELPEAYRLVNFCIYIAPQPSQLVVLSGN 369
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q+++K+WK KPLE+YYSWKK
Sbjct: 370 QTLSQVNEKFWKVNKPLEMYYSWKK 394
>gi|193688279|ref|XP_001947251.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 335
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/341 (49%), Positives = 227/341 (66%), Gaps = 30/341 (8%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S + + +K W+LS+YEL+R+PQE ITDNTEIAVSPRS+H+ELMCPICLD+LKKTMTT
Sbjct: 1 MASADPNDLSKVWKLSLYELHRSPQEPITDNTEIAVSPRSIHNELMCPICLDVLKKTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCS+CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDL+ISKIYP+ DEYEA Q
Sbjct: 61 KECLHRFCSECIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLIISKIYPNLDEYEAQQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVLE +NK+H+QA LVQSINEGI+LQ+Q+R QRTKKN + + ++ Q
Sbjct: 121 TRVLENINKNHNQANLVQSINEGIRLQTQNRQQRTKKNKSEELNESSSSTTPKPSNSSSQ 180
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKV-SKKTAKSDVMTSELETDDTSE 239
N ++ + V K ++ S S V + +T + D + + D+
Sbjct: 181 -------DNVMRTMVQTKVAKKMKSVMISEKEGSALTVDTLETTECDGTSKSVPVDEIEL 233
Query: 240 T-------------------DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS--N 277
++ + +++ + VDHL+KYL MRL ++ G+D+ + +
Sbjct: 234 VLKPHPAVMISDNPFIGVLKENSVRYIKTTANATVDHLSKYLAMRLAIDLGTDVPERTLS 293
Query: 278 FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSW 318
F IYV P+++ F+ L GNQ+L+ I DK+WK PLE++YS+
Sbjct: 294 FKIYVVPTADQFVPLKGNQTLQNIQDKFWKVNNPLEMFYSF 334
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/321 (51%), Positives = 213/321 (66%), Gaps = 23/321 (7%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL+RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC D
Sbjct: 11 KTWELSLYELHRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQD 70
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KLNK
Sbjct: 71 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQARVLAKLNKQ 130
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTT--- 187
HS +AL SI EG+++Q+ R QR +K+ E + + S + P +P T
Sbjct: 131 HSTSALTSSIEEGLRVQALSRPQRVRKH--ATEPDLSRLETASNASSENTPLKRPKTLSD 188
Query: 188 SNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTV 247
++ +N L+ AV S+ ++ + +++ L D D +I +
Sbjct: 189 DSSAENSLAEAV----------TDSAPPPELPQPVGDIELIFRPLPADHEPPDDSQIRYI 238
Query: 248 ESATDGEVDHLTKYLTMRLRLEGSDI--------CDSNFGIYVSPSSNNFILLPGNQSLR 299
++ + VDHL+KYL +RL LE + ++ + IY++ + N+ L G +L
Sbjct: 239 KTTANATVDHLSKYLAIRLSLESKKVDAGTSSSGGENKYTIYIASNPGNYTALNGAMTLE 298
Query: 300 QIHDKYWKSEKPLEVYYSWKK 320
Q+++KYW+ KPLE++Y+ +K
Sbjct: 299 QVNEKYWRINKPLEMFYAVQK 319
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/321 (50%), Positives = 212/321 (66%), Gaps = 23/321 (7%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL+RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC D
Sbjct: 11 KTWELSLYELHRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQD 70
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KLNK
Sbjct: 71 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQARVLAKLNKQ 130
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTT--- 187
HS +AL SI EG+++Q+ R QR +K+ E + + S + P +P T
Sbjct: 131 HSTSALTSSIEEGLRVQALSRPQRVRKH--ATEPDLSRLETASNASSENTPLKRPKTLSD 188
Query: 188 SNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTV 247
++ +N L+ V S+ ++ + +++ L D D +I +
Sbjct: 189 DSSAENSLAEVV----------TDSAPPPELPQPVGDIELIFRPLPADHEPPDDSQIRYI 238
Query: 248 ESATDGEVDHLTKYLTMRLRLEGSDI--------CDSNFGIYVSPSSNNFILLPGNQSLR 299
++ + VDHL+KYL +RL LE + ++ + IY++ + N+ L G +L
Sbjct: 239 KTTANATVDHLSKYLAIRLSLESKKVDAGTSSSGGENKYTIYIASNPGNYTALNGAMTLE 298
Query: 300 QIHDKYWKSEKPLEVYYSWKK 320
Q+++KYW+ KPLE++Y+ +K
Sbjct: 299 QVNEKYWRINKPLEMFYAVQK 319
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 211/334 (63%), Gaps = 24/334 (7%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL+RTPQEAITD TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC D
Sbjct: 17 KTWELSLYELHRTPQEAITDTTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQD 76
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +LNK
Sbjct: 77 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARLNKH 136
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKNIQ-------GNEENTPDISNTDQTSVQQQPSP 183
H+Q AL SI EG+KLQ+ +R QR +K+++ G P + + + Q+ +
Sbjct: 137 HNQQALSSSIEEGLKLQALNRAQRVRKHLEEPSGGDLGQPRKRPKTGSDESGAEQESHNS 196
Query: 184 QPTTSNAIKNQLSPA---VPKSPEARPSSAASSSTTKVSKKTAKSD----VMTSELETDD 236
+ + + +S V + ++ P +A + V +
Sbjct: 197 ALDSCHQVFKSISTGDIIVNSAVDSEPGTANGERGENFCDPPEPLNEVELVFKPHPNNHE 256
Query: 237 TSETDDKISTVESATDGEVDHLTKYLTMRLRLE--GSDIC--------DSNFGIYVSPSS 286
SE + +++ + VDHL++YL MRL LE D+ + + IY++P+
Sbjct: 257 DSEHGSQTRYIKTTANATVDHLSRYLAMRLALEKQKEDVAGPPSVGTEEPQYTIYIAPTP 316
Query: 287 NNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
F+ L G SL +++K+WK +PLE+YYS KK
Sbjct: 317 GQFVALTGGMSLEAVNEKHWKVNRPLEMYYSLKK 350
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 214/339 (63%), Gaps = 40/339 (11%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 SSKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KL+
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLS 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKN--------IQGNEENTPDISNTDQTSVQQQ 180
+ H+Q AL SI EG+K+Q+ HR QR +K+ G E+N S+ SV
Sbjct: 130 RLHNQQALSSSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSN 189
Query: 181 PSPQPTTSNAIKNQLSPAVP--------KSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
P+ + ++ S A P +SP+ P + S ++ + V
Sbjct: 190 QEAGPSRKRSRASEDSGAEPDLSHEGGVRSPDP-PGGGETGSEIELVFRAHPLLV----- 243
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGI 280
E D S+T V++ + VDHL+KYL +R+ LE ++ + + I
Sbjct: 244 EKDGYSQT----RYVKTTANATVDHLSKYLALRIALEEEALRGGAEGVTLGEVSEKQYTI 299
Query: 281 YVS--PSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+S + + L G+ +L +++KYWK KPLE+YY+
Sbjct: 300 YISTGAAGGQYTTLNGSLTLELVNEKYWKVSKPLELYYA 338
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 213/339 (62%), Gaps = 40/339 (11%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 SSKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KLN
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLN 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKN--------IQGNEENTPDISNTDQTSVQQQ 180
+ H+Q AL SI EG+K+Q+ HR QR +K+ G E+N S+ SV
Sbjct: 130 RLHNQQALSSSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSN 189
Query: 181 PSPQPTTSNAIKNQLSPAVP--------KSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
P+ + ++ S A P +SP+ P + S ++ + V
Sbjct: 190 QEAGPSRKRSRASEDSGAEPDLSHEGGVRSPDP-PGGGETGSEIELVFRAHPLLV----- 243
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGI 280
E D S+T V++ + VDHL+KYL +R+ LE ++ + + I
Sbjct: 244 EKDGYSQT----RYVKTTANATVDHLSKYLALRIALEEEVLRGEAEGVTLGEVSEKQYTI 299
Query: 281 YV--SPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+ + + L G+ +L +++KYWK KPLE+YY+
Sbjct: 300 YICTGVAGGQYTTLNGSLTLELVNEKYWKVSKPLELYYA 338
>gi|417399162|gb|JAA46609.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 336
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 215/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQALNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S +S+A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNSSAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|291412444|ref|XP_002722489.1| PREDICTED: ring finger protein 2 [Oryctolagus cuniculus]
Length = 336
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ AS + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNASVAIDPVLDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|197097984|ref|NP_001127433.1| E3 ubiquitin-protein ligase RING2 [Pongo abelii]
gi|62900923|sp|Q5R9J5.1|RING2_PONAB RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|55729672|emb|CAH91565.1| hypothetical protein [Pongo abelii]
Length = 336
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/327 (51%), Positives = 211/327 (64%), Gaps = 29/327 (8%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN--TPDISNTDQTSVQQQPSP 183
++Q AL SI EG+K+Q+ +RLQR KK N G E+N + SN S Q+
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPS 193
Query: 184 QPTTSNAIKNQLSPAVPKSPEA-RPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDD 242
T + + L P + A P +S V + + +E DD+++T
Sbjct: 194 NKRTKTSDDSGLEPDNNNAAMAIDPVMDGASEIELVFRPHP------TLMEKDDSAQT-- 245
Query: 243 KISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNFI 290
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 --RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFT 303
Query: 291 LLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 304 VLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|335295881|ref|XP_003357628.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 2 [Sus
scrofa]
Length = 347
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 25 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 84
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 85 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 144
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 145 HNNQQALCHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 203
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 204 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 256
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 257 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 313
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 314 TVLNGSFSLELVSEKYWKVNKPMELYYA 341
>gi|301770957|ref|XP_002920895.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Ailuropoda
melanoleuca]
Length = 356
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 216/331 (65%), Gaps = 31/331 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+L G+ SL + +KYWK KP+E+YY+ +K
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYAPQK 333
>gi|311264978|ref|XP_003130427.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 1 [Sus
scrofa]
Length = 336
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALCHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 216/345 (62%), Gaps = 37/345 (10%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTS 176
EAHQ RVL +++K ++Q AL SI EG+K+Q+ RLQR K++ N D ++ S
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSSHCS 180
Query: 177 VQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELET-- 234
S Q + P++ ++ + S + + + +D TSE+E
Sbjct: 181 NASVHSNQ---------EAGPSIKRTKTSDDSGLDMDNAAENGGGDSVNDSGTSEIELVF 231
Query: 235 ---DDTSETDDKISTVE-------SATDGEVDHLTKYLTMRLRLE----GSDICDSN--- 277
E DD ++VE ++ + VDHL+KYL +RL LE SD N
Sbjct: 232 RPHPTLMEKDDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNSDASPVNVEA 291
Query: 278 -----FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ IY+ + N F +L G+ SL + +KYWK KP+E+Y++
Sbjct: 292 ASEKQYTIYIPTAGNQFTVLNGSFSLELVSEKYWKVNKPMELYFA 336
>gi|281353876|gb|EFB29460.1| hypothetical protein PANDA_009706 [Ailuropoda melanoleuca]
Length = 333
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 216/331 (65%), Gaps = 31/331 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+L G+ SL + +KYWK KP+E+YY+ +K
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYAPQK 333
>gi|2239142|emb|CAA73380.1| polycomb-M33 interacting protein Ring1B [Mus musculus]
Length = 339
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|432089360|gb|ELK23311.1| E3 ubiquitin-protein ligase RING2 [Myotis davidii]
Length = 397
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 75 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 134
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 135 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 194
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 195 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 253
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 254 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 306
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 307 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 363
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 364 TVLNGSFSLELVSEKYWKVNKPMELYYA 391
>gi|148707518|gb|EDL39465.1| ring finger protein 2, isoform CRA_a [Mus musculus]
Length = 337
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 15 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 74
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 75 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 134
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 135 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 193
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 194 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 246
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 247 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 303
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 304 TVLNGSFSLELVSEKYWKVNKPMELYYA 331
>gi|6005747|ref|NP_009143.1| E3 ubiquitin-protein ligase RING2 [Homo sapiens]
gi|332230654|ref|XP_003264507.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nomascus
leucogenys]
gi|332811387|ref|XP_514057.3| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
troglodytes]
gi|397489263|ref|XP_003815650.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
paniscus]
gi|402857835|ref|XP_003893444.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Papio
anubis]
gi|426333040|ref|XP_004028095.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Gorilla
gorilla gorilla]
gi|62901044|sp|Q99496.1|RING2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=Huntingtin-interacting protein 2-interacting
protein 3; Short=HIP2-interacting protein 3; AltName:
Full=Protein DinG; AltName: Full=RING finger protein 1B;
Short=RING1b; AltName: Full=RING finger protein 2;
AltName: Full=RING finger protein BAP-1
gi|4769008|gb|AAD29717.1|AF141327_1 ring finger protein BAP-1 [Homo sapiens]
gi|1785643|emb|CAA71596.1| dinG [Homo sapiens]
gi|15214887|gb|AAH12583.1| Ring finger protein 2 [Homo sapiens]
gi|119611594|gb|EAW91188.1| ring finger protein 2, isoform CRA_b [Homo sapiens]
gi|123988874|gb|ABM83858.1| ring finger protein 2 [synthetic construct]
gi|123999200|gb|ABM87180.1| ring finger protein 2 [synthetic construct]
gi|189054551|dbj|BAG37324.1| unnamed protein product [Homo sapiens]
gi|208967348|dbj|BAG73688.1| ring finger protein 2 [synthetic construct]
gi|380815346|gb|AFE79547.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|383412967|gb|AFH29697.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|410221702|gb|JAA08070.1| ring finger protein 2 [Pan troglodytes]
gi|410263314|gb|JAA19623.1| ring finger protein 2 [Pan troglodytes]
gi|410305956|gb|JAA31578.1| ring finger protein 2 [Pan troglodytes]
gi|410331985|gb|JAA34939.1| ring finger protein 2 [Pan troglodytes]
Length = 336
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|33563274|ref|NP_035407.1| E3 ubiquitin-protein ligase RING2 [Mus musculus]
gi|296229541|ref|XP_002760304.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Callithrix
jacchus]
gi|403266315|ref|XP_003925335.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|62901047|sp|Q9CQJ4.1|RING2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|12849049|dbj|BAB28186.1| unnamed protein product [Mus musculus]
gi|12850291|dbj|BAB28663.1| unnamed protein product [Mus musculus]
gi|18043367|gb|AAH20122.1| Ring finger protein 2 [Mus musculus]
gi|26326309|dbj|BAC26898.1| unnamed protein product [Mus musculus]
gi|71059923|emb|CAJ18505.1| Rnf2 [Mus musculus]
gi|74217079|dbj|BAE26638.1| unnamed protein product [Mus musculus]
gi|148707519|gb|EDL39466.1| ring finger protein 2, isoform CRA_b [Mus musculus]
gi|149058413|gb|EDM09570.1| ring finger protein 2 [Rattus norvegicus]
Length = 336
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|155372127|ref|NP_001094673.1| E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|57088937|ref|XP_537164.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Canis lupus
familiaris]
gi|194210405|ref|XP_001490057.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Equus caballus]
gi|354477357|ref|XP_003500887.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|410986000|ref|XP_004001389.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2
[Felis catus]
gi|426240030|ref|XP_004013918.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Ovis aries]
gi|151554874|gb|AAI48045.1| RNF2 protein [Bos taurus]
gi|296478860|tpg|DAA20975.1| TPA: E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|344238862|gb|EGV94965.1| E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|351705546|gb|EHB08465.1| E3 ubiquitin-protein ligase RING2 [Heterocephalus glaber]
gi|440908241|gb|ELR58285.1| E3 ubiquitin-protein ligase RING2 [Bos grunniens mutus]
Length = 336
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|355746097|gb|EHH50722.1| hypothetical protein EGM_01592 [Macaca fascicularis]
Length = 336
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/331 (49%), Positives = 215/331 (64%), Gaps = 31/331 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTTDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+L G+ SL + +KYWK KP+++YY+ K
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMKLYYAHTK 333
>gi|355716862|gb|AES05749.1| ring finger protein 2 [Mustela putorius furo]
Length = 334
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 13 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 72
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 73 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 132
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 133 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 191
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 192 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 244
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 245 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 301
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 302 TVLNGSFSLELVSEKYWKVNKPMELYYA 329
>gi|163914471|ref|NP_001106320.1| ring finger protein 2 [Xenopus laevis]
gi|160773127|gb|AAI55052.1| LOC100127274 protein [Xenopus laevis]
gi|213625992|gb|AAI69620.1| Hypothetical protein LOC100127274 [Xenopus laevis]
gi|213626554|gb|AAI69622.1| Hypothetical protein LOC100127274 [Xenopus laevis]
Length = 336
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 215/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RL R KK N G E+N D S+ SV P
Sbjct: 134 HNNQQALSHSIEEGLKIQALNRLPRGKKQQVENGSGAEDNA-DSSHCSNASVHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ ++S V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDTNNETASMDSVLDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE S + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEEFRSKGENNEMSLSAASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|26354897|dbj|BAC41075.1| unnamed protein product [Mus musculus]
Length = 336
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 213/328 (64%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGHATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATATGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LL G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TLLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/337 (50%), Positives = 215/337 (63%), Gaps = 27/337 (8%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNG-DSSHC 179
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
SV P+ + S A + + VS+ + +
Sbjct: 180 SNASVHSNQEAGPSIKRTKTSDDSGL--DMDNATENGGGDIALDGVSEIELVFRPHPTLM 237
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRL-------EGSDI-----CDSNFGI 280
E +D ++T ++++ + VDHL+KYL +RL L E S I + + I
Sbjct: 238 EKEDAAQT----RYIKTSGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQYTI 293
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+ +SN F +L G+ SL + +KYWK KP+E+Y++
Sbjct: 294 YIPTASNQFTVLNGSFSLELVSEKYWKVNKPMELYFA 330
>gi|431915925|gb|ELK16179.1| E3 ubiquitin-protein ligase RING2 [Pteropus alecto]
Length = 336
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQALNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias latipes]
Length = 342
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 216/349 (61%), Gaps = 45/349 (12%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ RLQR K+ N G E+N D S+
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNG-DSSHC 179
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
SV + P++ ++ + S +T + + D SE+
Sbjct: 180 SNASVHSN------------QEAGPSIKRTKMSDDSGLDMDNTVENGGGDSVMDGGASEI 227
Query: 233 ET-----DDTSETDDKISTVE-------SATDGEVDHLTKYLTMRLRLE----GSDICDS 276
E E DD S+VE ++ + VDHL+KYL +RL LE +D
Sbjct: 228 ELVFRPHPTLMEKDDSHSSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNADASPV 287
Query: 277 N--------FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
N + IY+ N F +L G+ SL + +KYWK KP+E+Y++
Sbjct: 288 NMEAASEKQYTIYIPTPGNQFTVLNGSFSLELVSEKYWKVNKPMELYFA 336
>gi|47497988|ref|NP_998872.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|171847227|gb|AAI61443.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624130|gb|AAI70688.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624607|gb|AAI71333.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 216/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RL R KK N G E+N D S+ SV P
Sbjct: 134 HNNQQALSHSIEEGLKIQALNRLPRGKKPQVENGSGAEDNA-DSSHCSNASVHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ ++S V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDTNNETASMDSVLDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE G + + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEEFRSKGENNQMSLNAASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 211/329 (64%), Gaps = 26/329 (7%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEA+TDNTEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 8 SKTWELSLYELHRTPQEALTDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQ 67
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY+A Q RVL KL +
Sbjct: 68 ECIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYDAQQERVLAKLKQ 127
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
+ + AL QSI EG++ Q+ +R QR G D+ + D S T S+
Sbjct: 128 TINPNALTQSIEEGLRQQALNRAQRVSVKKSGTTNEGGDVKDEDAISH--------TGSD 179
Query: 190 AIKNQLSPAVPKSPEARPSS-------AASSSTTKVSKKTAKSDVMTSELETDDTSETDD 242
+ L P ++P +S A++ S K+ ++D+ D +
Sbjct: 180 THTDDLGPKQQRAPSEESNSLGEGTSDASTGSKPARPKQNTQNDIELLFKPHPDMEQDVS 239
Query: 243 KISTVESATDGEVDHLTKYLTMRLRLE-----GSDICDS------NFGIYVSPSSNNFIL 291
+ ++++ + V+HL KYL MRL LE G D +S + IYVS ++ F +
Sbjct: 240 QTRYIKTSANATVNHLGKYLAMRLALENQLNSGEDSGESASLKPEAYRIYVSTTAGQFSM 299
Query: 292 LPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+ GN+SL IH++Y K+ KPLE++Y +K
Sbjct: 300 MDGNESLDHIHERYLKANKPLELFYMPEK 328
>gi|444729309|gb|ELW69733.1| E3 ubiquitin-protein ligase RING2 [Tupaia chinensis]
Length = 336
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 212/328 (64%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
+Q AL S EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HKNQQALSHSTEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ +S F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|395530972|ref|XP_003767558.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Sarcophilus harrisii]
Length = 336
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 215/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V +++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVLDGSSEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|126306334|ref|XP_001366901.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Monodelphis
domestica]
gi|149636359|ref|XP_001516692.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Ornithorhynchus
anatinus]
Length = 336
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 214/328 (65%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/349 (48%), Positives = 216/349 (61%), Gaps = 45/349 (12%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ RLQR K+ N G E+N D S+
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNG-DSSHC 179
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
SV + P++ ++ + S + + + D SE+
Sbjct: 180 SNASVHSN------------QEAGPSIKRTKTSDDSGLDMDNAAENGGGDSVIDGGASEI 227
Query: 233 ET-----DDTSETDDKISTVE-------SATDGEVDHLTKYLTMRLRL-------EGSDI 273
E E DD ++VE ++ + VDHL+KYL +RL L E S +
Sbjct: 228 ELVFRPHPTLMEKDDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPV 287
Query: 274 -----CDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + IY+ + N F +L G+ SL + +KYWK KP+E+Y++
Sbjct: 288 NVEAASEKQYTIYIPTAGNQFTVLNGSFSLELVSEKYWKVNKPMELYFA 336
>gi|327277423|ref|XP_003223464.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Anolis
carolinensis]
Length = 336
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 213/328 (64%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQALNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ + + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNTTVAIDPVLDGASEIELVFRPHPTLMENDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLETASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|224056986|ref|XP_002190866.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Taeniopygia guttata]
Length = 336
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 206/329 (62%), Gaps = 33/329 (10%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
++Q AL SI EG+K+Q+ +RLQR KK N D N D + SN
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHC----------SN 181
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVM--TSELET-----DDTSETDD 242
A + A P + + S + + A VM SE+E E DD
Sbjct: 182 ASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVMDGASEIELVFRPHPTLMENDD 241
Query: 243 KIST--VESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNN 288
T ++++ + VDHL+KYL +RL LE + + IY++ ++
Sbjct: 242 SAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATAAGQ 301
Query: 289 FILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 302 FTVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|28422507|gb|AAH46935.1| Rnf2-b protein [Xenopus laevis]
Length = 369
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 212/339 (62%), Gaps = 41/339 (12%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQ AI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 36 SSKTWELSLYELHRTPQ-AIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 94
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KL+
Sbjct: 95 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLS 154
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKN--------IQGNEENTPDISNTDQTSVQQQ 180
+ H+Q AL SI EG+K+Q+ HR QR +K+ G E+N S+ SV
Sbjct: 155 RLHNQQALSSSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSN 214
Query: 181 PSPQPTTSNAIKNQLSPAVP--------KSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
P+ + ++ S A P +SP+ P + S ++ + V
Sbjct: 215 QEAGPSRKRSRASEDSGAEPDLSHEGGVRSPDP-PGGGENGSEIELVFRAHPLLV----- 268
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGI 280
E D S+T V++ + VDHL+KYL +R+ LE ++ + + I
Sbjct: 269 EKDGYSQT----RYVKTTANATVDHLSKYLALRIALEEEALRGGAEGVTVGEVSEKQYTI 324
Query: 281 YV--SPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+ + + L G+ +L +++KYWK KPLE+YY+
Sbjct: 325 YICTGAAGGQYTTLNGSLTLELVNEKYWKISKPLELYYA 363
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 212/339 (62%), Gaps = 41/339 (12%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQ AI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 SSKTWELSLYELHRTPQ-AIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 68
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KL+
Sbjct: 69 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLS 128
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKN--------IQGNEENTPDISNTDQTSVQQQ 180
+ H+Q AL SI EG+K+Q+ HR QR +K+ G E+N S+ SV
Sbjct: 129 RLHNQQALSSSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSN 188
Query: 181 PSPQPTTSNAIKNQLSPAVP--------KSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
P+ + ++ S A P +SP+ P + S ++ + V
Sbjct: 189 QEAGPSRKRSRASEDSGAEPDLSHEGGVRSPDP-PGGGENGSEIELVFRAHPLLV----- 242
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGI 280
E D S+T V++ + VDHL+KYL +R+ LE ++ + + I
Sbjct: 243 EKDGYSQT----RYVKTTANATVDHLSKYLALRIALEEEALRGGAEGVTVGEVSEKQYTI 298
Query: 281 YV--SPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+ + + L G+ +L +++KYWK KPLE+YY+
Sbjct: 299 YICTGAAGGQYTTLNGSLTLELVNEKYWKISKPLELYYA 337
>gi|449277702|gb|EMC85785.1| E3 ubiquitin-protein ligase RING2 [Columba livia]
Length = 336
Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 206/329 (62%), Gaps = 33/329 (10%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
++Q AL SI EG+K+Q+ +RLQR KK N D N D + SN
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHC----------SN 181
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVM--TSELET-----DDTSETDD 242
A + A P + + S + + A VM SE+E E DD
Sbjct: 182 ASTHSNQEAGPSNKRTKTSDDSGLELDNNNTTVAIDPVMDGASEIELVFRPHPTLMENDD 241
Query: 243 KIST--VESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNN 288
T ++++ + VDHL+KYL +RL LE + + IY++ ++
Sbjct: 242 SAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQ 301
Query: 289 FILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 302 FTVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|260182163|gb|ACX35592.1| RING1 [Salmo salar]
Length = 388
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 170/364 (46%), Positives = 216/364 (59%), Gaps = 65/364 (17%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRSPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ RVLE+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQDRVLERLNR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTSVQQQ- 180
H++ AL SI EG+++Q+ HR QR +K Q G E+N S+ S
Sbjct: 131 LHNKQALSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDARSHLSHDSAPSHA 190
Query: 181 ---PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELE---- 233
PS P+ + +N P V S E+ P S T + + SE+E
Sbjct: 191 PLPPSHTPSEAGPSRNPKRPRV--SDESGPEVDGGSPTAPLRH---HKEGPGSEIELVFR 245
Query: 234 -------TDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE----------------- 269
T D S+T V++ + VDHL+KYL +R+ LE
Sbjct: 246 PHPLLVNTQDYSQT----RYVKTTANATVDHLSKYLALRIALEERQRDSQSDAAMEKGKE 301
Query: 270 ----GS------------DICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLE 313
G+ ++ + + IY++ S F L G+ +L +++KYWK KPLE
Sbjct: 302 GVEAGAKGEKSAGGASLKNVSEKQYTIYITTSGGQFSTLNGSLTLELVNEKYWKVRKPLE 361
Query: 314 VYYS 317
+YY+
Sbjct: 362 LYYA 365
>gi|148362153|gb|ABQ59676.1| RING1 [Salmo salar]
Length = 395
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 170/364 (46%), Positives = 216/364 (59%), Gaps = 65/364 (17%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 18 SKTWELSLYELHRSPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 77
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ RVLE+LN+
Sbjct: 78 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQDRVLERLNR 137
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTSVQQQ- 180
H++ AL SI EG+++Q+ HR QR +K Q G E+N S+ S
Sbjct: 138 LHNKQALSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDARSHLSHDSAPSHA 197
Query: 181 ---PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELE---- 233
PS P+ + +N P V S E+ P S T + + SE+E
Sbjct: 198 PLPPSHTPSEAGPSRNPKRPRV--SDESGPEVDGGSPTAPLRH---HKEGPGSEIELVFR 252
Query: 234 -------TDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE----------------- 269
T D S+T V++ + VDHL+KYL +R+ LE
Sbjct: 253 PHPLLVNTQDYSQT----RYVKTTANATVDHLSKYLALRIALEERQRDSQSDAAMEKGKE 308
Query: 270 ----GS------------DICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLE 313
G+ ++ + + IY++ S F L G+ +L +++KYWK KPLE
Sbjct: 309 GVEAGAKGEKSAGGASLKNVSEKQYTIYITTSGGQFSTLNGSLTLELVNEKYWKVRKPLE 368
Query: 314 VYYS 317
+YY+
Sbjct: 369 LYYA 372
>gi|118094209|ref|XP_422295.2| PREDICTED: E3 ubiquitin-protein ligase RING2 [Gallus gallus]
Length = 336
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 161/328 (49%), Positives = 213/328 (64%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ + + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|326924674|ref|XP_003208550.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Meleagris
gallopavo]
Length = 336
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 161/328 (49%), Positives = 213/328 (64%), Gaps = 31/328 (9%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ + + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNF 289
++++ + VDHL+KYL +RL LE + + IY++ ++ F
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQF 302
Query: 290 ILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 303 TVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|387019653|gb|AFJ51944.1| e3 ubiquitin-protein ligase RING2-like [Crotalus adamanteus]
Length = 336
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 218/341 (63%), Gaps = 35/341 (10%)
Query: 1 MTSTEQSGTT----KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
M+ T Q+ T K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK
Sbjct: 1 MSQTVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQALNRLQRGKKQQIENGSGAEDNG-DSSHC 179
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT--- 229
S P+ N+ + S ++ + + V ++ +++
Sbjct: 180 SNASTHSNQEAGPS------NKRTKTSDDSGLELDNNNTTVAIDPVLDGASEIELVFRPH 233
Query: 230 -SELETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDS 276
+ +E DD+++T ++++ + VDHL+KYL +RL LE +
Sbjct: 234 PTLMENDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLETASEK 289
Query: 277 NFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ IY++ ++ F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 290 QYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 330
>gi|260182172|gb|ACX35600.1| RING1 [Salmo salar]
Length = 387
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 212/359 (59%), Gaps = 52/359 (14%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D+TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ RVLE+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQDRVLERLNR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTSV-QQQ 180
H++ AL SI EG+++Q+ HR QR +K Q G E+N S+ S
Sbjct: 131 LHNKQALSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSHLSHDSAPSHA 190
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL-------- 232
P P T + + +P P+ + S T ++ +S EL
Sbjct: 191 PLPPSHTPSEAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHPLL 250
Query: 233 -ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG--------------------- 270
T D S+T V++ + VDHL+KYL +R+ LE
Sbjct: 251 VNTQDYSQT----RYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEGGARGEE 306
Query: 271 ---------SDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+I + + IY+ S F L G+ +L +++KYWK KPLE+YY+ K
Sbjct: 307 AAAAEGTSLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYYAPSK 365
>gi|291190270|ref|NP_001167351.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
gi|223649380|gb|ACN11448.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
Length = 388
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 212/360 (58%), Gaps = 53/360 (14%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D+TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ RVLE+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQDRVLERLNR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTSV-QQQ 180
H++ AL SI EG+++Q+ HR QR +K Q G E+N S+ S
Sbjct: 131 LHNKQALSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSHLSHDSAPSHA 190
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL-------- 232
P P T + + +P P+ + S T ++ +S EL
Sbjct: 191 PLPPSHTPSEAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHPLL 250
Query: 233 -ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG--------------------- 270
T D S+T V++ + VDHL+KYL +R+ LE
Sbjct: 251 VNTQDYSQT----RYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEGGARGEE 306
Query: 271 ----------SDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+I + + IY+ S F L G+ +L +++KYWK KPLE+YY+ K
Sbjct: 307 AAAAAEGTSLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYYAPSK 366
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/347 (48%), Positives = 214/347 (61%), Gaps = 39/347 (11%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQ--EAITDNTEIAVSPRSLHSELMCPICLDML 54
MT T Q+ +K+WELS+YEL RTPQ EAITD EIAVSPRSLHSELMCPICLDML
Sbjct: 1 MTQTVQTNGAQPLSKTWELSLYELQRTPQAQEAITDGLEIAVSPRSLHSELMCPICLDML 60
Query: 55 KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRD 114
K TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRD
Sbjct: 61 KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRD 120
Query: 115 EYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQ 174
EYEAHQ RVL +++K ++Q AL SI EG+K+Q+ RLQR K++ N D ++
Sbjct: 121 EYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSAH 180
Query: 175 TSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELET 234
S S Q + P++ ++ + S + + + D SE+E
Sbjct: 181 CSNASVHSNQ---------EAGPSIKRTKTSDDSGLDMDNAAENGGGDSVIDGGASEIEL 231
Query: 235 -----DDTSETDDKISTVE-------SATDGEVDHLTKYLTMRLRL-------EGSDI-- 273
E DD ++VE ++ + VDHL+KYL +RL L E S +
Sbjct: 232 VFRPHPTLMEKDDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPVNV 291
Query: 274 ---CDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + IY+ + N F +L G+ SL + +KYWK KP+E+Y++
Sbjct: 292 EAASEKQYTIYIPTAGNQFTVLNGSFSLELVSEKYWKVNKPMELYFA 338
>gi|327290713|ref|XP_003230066.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Anolis
carolinensis]
Length = 331
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 209/339 (61%), Gaps = 39/339 (11%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEA+ D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQSASKTWELSLYELHRTPQEALMDGTEIAVSPRSLHSELMCPICLDMLKHTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQP 181
RVL KLN+ H+Q AL S+ EG+K+Q+ +R QR ++ Q +E + S + +QP
Sbjct: 123 RVLAKLNRLHNQQALRSSMEEGLKVQAMNRGQRVRR--QRHESDNASFSGAEDN--LRQP 178
Query: 182 SPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSE---------- 231
+ ++ ++P +RP + S V++
Sbjct: 179 --------LARVHIASVTTQTPNSRPIPRKALSALGGGVTEGGGVVVSGSEIELFYRPHL 230
Query: 232 --LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEGS-----------DICDSNF 278
+E S+T V++ + VDHL+KYL +R+ LE + D+ + +
Sbjct: 231 VLVEKGGYSQT----RYVKTTANATVDHLSKYLALRIALEEAPTPGPEPPALRDVSEKQY 286
Query: 279 GIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ F L G+ +L +++KYWK +PLE+YY+
Sbjct: 287 TIYITTPGGAFTTLNGSVTLELVNEKYWKLSRPLELYYA 325
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 213/337 (63%), Gaps = 27/337 (8%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 3 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 62
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 63 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 122
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+
Sbjct: 123 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNG-DSSHC 181
Query: 173 DQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL 232
SV P+ + S A + + VS+ + +
Sbjct: 182 SNASVHSNQEAGPSIKRTKTSDDSGL--DMDNATENGGGDIALDGVSEIELVFRPHPTLM 239
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRL-------EGSDI-----CDSNFGI 280
E +D ++T ++++ + VDHL+KYL +RL L E S I + I
Sbjct: 240 EKEDAAQT----RYIKTSGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQCTI 295
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
Y+ +S+ F +L G+ SL + +K WK KP+E+Y++
Sbjct: 296 YIPTASDQFTVLNGSFSLELVSEKCWKVNKPMELYFA 332
>gi|307147576|gb|ADN37676.1| RING1.B [Oncorhynchus mykiss]
Length = 381
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 209/361 (57%), Gaps = 57/361 (15%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D+TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ R LE+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQDRALERLNQ 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTS----V 177
H+ L SI EG+++Q+ HR QR +K Q G E+N S+ S V
Sbjct: 131 QHNNRILSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSHLSHDSAPAHV 190
Query: 178 QQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL----- 232
PS P + +N P P+ + S ++ +S EL
Sbjct: 191 LLPPSHPPPEAGHTRN---PKRPRESDGSVPEVDGGSPAPPVRRHKESPGSEIELVFRPH 247
Query: 233 ----ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------------ 270
T D S+T V++ + VDHL+KYL +R+ LE
Sbjct: 248 PLLVNTQDYSQT----RYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEGGAK 303
Query: 271 -----------SDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWK 319
+I + + IY+ S F L G+ +L +++KYWK KPLE+YY+
Sbjct: 304 GGDAAAEGASLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYYAPT 363
Query: 320 K 320
K
Sbjct: 364 K 364
>gi|391326829|ref|XP_003737913.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Metaseiulus
occidentalis]
Length = 336
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 206/334 (61%), Gaps = 17/334 (5%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MT+ + G ++W+LS+YE+NRTPQE TD+TEIAVS RSLHSELMCPICLD+LK TMTT
Sbjct: 1 MTAMDPLGAARTWDLSLYEMNRTPQEVCTDSTEIAVSQRSLHSELMCPICLDILKTTMTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFC DCIITALRSGNKECPTCRKKLVSKRSLRADPNFD LI+KIYPSRDEYE +Q
Sbjct: 61 KECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDALIAKIYPSRDEYEHYQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVL KLNK+ Q A SI EG+K Q+ R +K G D + + Q
Sbjct: 121 ERVLAKLNKTCGQ-AFASSIEEGLKAQALSRKMTNRKRPTGERLGEGDEPSASSQTSQAA 179
Query: 181 PSPQ----PTTSNAIKNQLSPAVPKSPEAR---PSSAASSSTTKVSKKTAKSDVMTSELE 233
SPQ + S+ +P P + R P SST V T + ++
Sbjct: 180 NSPQNQNDGSVSDGSSRSSTPQPPLRKKGRAVAPDDTDESSTDNVV--TVNEVELVAKPH 237
Query: 234 TDDTSETDDKISTVESATDGEVDHLTKYLTMRL------RLEGSDICDSNFGIYVSPSSN 287
+ S+ D +I +++ + +HL Y R R + SD ++ +YVS
Sbjct: 238 PHEASQ-DSQIRYMKTTANATAEHLAAYFATRFDIDWSERGQSSDSEKVSYTLYVSTGPQ 296
Query: 288 NFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKKV 321
+++ LPGN +L QI+DKYWK +PLE++Y K+V
Sbjct: 297 SYLALPGNITLEQINDKYWKQNRPLELFYVAKRV 330
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 204/325 (62%), Gaps = 35/325 (10%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
ELS+YEL+RTPQEAITD TEI++SPRSLHSELMCPICLDMLK TMTTKECLHRFC +CII
Sbjct: 17 ELSLYELHRTPQEAITDGTEISISPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECII 76
Query: 74 TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
TALRSGNKECPTCRKKLVSKRSLR DPNFD LI+KIYP R+EYEAHQ +VL++L+K H+Q
Sbjct: 77 TALRSGNKECPTCRKKLVSKRSLRPDPNFDALIAKIYPDREEYEAHQEKVLQRLSKHHNQ 136
Query: 134 AALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKN 193
AL SI EG+KLQ+ +R QR +K + + P I+ T + S TT K
Sbjct: 137 QALTSSIEEGLKLQAMNRAQRVRKRSSEEQGHAP-IAATAEGS---------TTPTNRKR 186
Query: 194 QLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELET--------DDTSETDDKIS 245
Q + S E+ S ST + S + +++ SE+E D +
Sbjct: 187 QKA----NSDESDASENTFDSTGEASNEASEN---VSEIELVFKPHPKDHDPETVAQQTR 239
Query: 246 TVESATDGEVDHLTKYLTMRLRLEGSDICDSN----------FGIYVSPSSNNFILLPGN 295
+++ + VDHL KYL +RL LE N + IY++ + F L G+
Sbjct: 240 YIKTTANASVDHLAKYLAIRLSLESKQEGSPNSQDKAPEVPSYTIYIASTPGQFTQLSGS 299
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
L +++KYWK KPLE+YY+ K
Sbjct: 300 MLLEHVNEKYWKVNKPLEMYYAQDK 324
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 202/321 (62%), Gaps = 49/321 (15%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 16 SKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 75
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL +++K
Sbjct: 76 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISK 135
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
++Q AL SI EG+K+Q+ ++RTK T D S D N
Sbjct: 136 HNNQQALSHSIEEGLKIQAMTSIKRTK---------TSDDSGLDM-------------DN 173
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKI-STVE 248
A +N +V + +S V + + +E DD + + + ++
Sbjct: 174 AAENGGGDSV--------NDGGTSEIELVFRPHP------TLMEKDDGHNSVEFVPRYIK 219
Query: 249 SATDGEVDHLTKYLTMRLRLE----GSDICDSN--------FGIYVSPSSNNFILLPGNQ 296
++ + VDHL+KYL +RL LE SD N + IY+ + N F +L G+
Sbjct: 220 TSGNATVDHLSKYLAVRLALEELRRNSDASPVNMEAASEKQYTIYIPTAGNQFTVLNGSF 279
Query: 297 SLRQIHDKYWKSEKPLEVYYS 317
SL + +KYWK KP+E+Y++
Sbjct: 280 SLELVSEKYWKVNKPMELYFA 300
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/337 (48%), Positives = 201/337 (59%), Gaps = 51/337 (15%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MTS S +KSWELS+YEL+R+PQEAITD TEIAVSPRSLHSELMCPICLDMLK T TT
Sbjct: 1 MTSPGNSQPSKSWELSLYELHRSPQEAITDETEIAVSPRSLHSELMCPICLDMLKNTYTT 60
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFC DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ
Sbjct: 61 KECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQ 120
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTD--QTSVQ 178
RV+ KLNK H+ AAL SI EG+K+Q+ +R QR + + S+ + ++
Sbjct: 121 ERVMAKLNKRHNTAALSTSIEEGLKVQALNRAQRVPPKAMKRPRTSDESSSCGDVEGEIE 180
Query: 179 QQPS-PQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDT 237
+ S P SN I+ P + +RP M L+T
Sbjct: 181 GEGSLDMPDPSNEIELVFKPHPDEIMHSRP-------------------YMVRYLKT--- 218
Query: 238 SETDDKISTVESATDGEVDHLTKYLTMRLRLEGSDICD--------------SNFGIYVS 283
+ +DHL KYL+MR+ L+ D F I++S
Sbjct: 219 ------------SALASIDHLAKYLSMRIALDLRDAGSMDSQSSSNQNEGGCGEFTIFIS 266
Query: 284 PSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
F L G Q+L Q+++++WK+ +PLE+Y+ KK
Sbjct: 267 TYPGQFQSLNGCQTLEQVNERHWKANRPLEMYFLSKK 303
>gi|351703542|gb|EHB06461.1| E3 ubiquitin-protein ligase RING1 [Heterocephalus glaber]
Length = 376
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 211/372 (56%), Gaps = 54/372 (14%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQP 181
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T +S + + + +
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT-TMSGGEGEAGEGEG 181
Query: 182 SPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETD 241
+ +S++ + PK P + +S T + E E
Sbjct: 182 DGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSXPPEPGGEIELV 241
Query: 242 DK-------------ISTVESATDGEVDHLTKYLTMRLRLE------------------- 269
+ V++ + VDHL+KYL +R+ LE
Sbjct: 242 FRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQEAGEPGGPGGASDT 301
Query: 270 -GSD--------------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKS 308
G D + + + IY++P F L G+ +L +++K+WK
Sbjct: 302 GGPDVGGGEAGGGLEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKV 361
Query: 309 EKPLEVYYSWKK 320
+PLE+ Y+ K
Sbjct: 362 SRPLELCYAPTK 373
>gi|432881043|ref|XP_004073777.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oryzias
latipes]
Length = 388
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 206/361 (57%), Gaps = 58/361 (16%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQE I D TE+AVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEVIVDGTEVAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ VLE+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQRSVLERLNR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
H++ AL SI EG++ Q+++R R KK Q +NT D + S SN
Sbjct: 131 LHNKEALSSSIEEGLRQQARYRNHRVKKPTQ-ESDNTTFSGGEDNGDSRSHLSHDSAPSN 189
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSEL---ETDDTSETD----- 241
A P PEA PS ++ S A S T L + SE +
Sbjct: 190 APH----PRGQTPPEAGPSRKRGRASDDGSGPEADSGSPTPPLRWRKEGPASEIELVFRP 245
Query: 242 ----------DKISTVESATDGEVDHLTKYLTMRLRL----------------------- 268
++ V++ + VDHL+KYL +R+ L
Sbjct: 246 HPQLVQAQDYNQTRYVKTTANATVDHLSKYLALRIALEDRRTDGEPEDRAREEAGGEERG 305
Query: 269 ---------EGS---DICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYY 316
EGS ++ + + IY+ F L G+ +L +++KYWK KPLE+YY
Sbjct: 306 ETEGASKSGEGSGLNNVSEKQYTIYIMTRGGQFSTLNGSLTLELVNEKYWKVRKPLELYY 365
Query: 317 S 317
+
Sbjct: 366 A 366
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/158 (85%), Positives = 141/158 (89%), Gaps = 1/158 (0%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M S EQ +KSW+LS+YEL+R PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MASVEQM-QSKSWDLSLYELHRAPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 59
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ
Sbjct: 60 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 119
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
RVL K N SHSQ ALV SINEGIKLQSQ+R R +K
Sbjct: 120 ERVLAKFNSSHSQQALVHSINEGIKLQSQNRPNRKQKG 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
++ I +++ ++ +DHL+KYL MRL L+ ++ +S NF IY++ ++ ++L GN
Sbjct: 357 ENSIRYIKTTSNATIDHLSKYLAMRLTLDLDQELPESYRLVNFCIYIAQQTDQLVVLSGN 416
Query: 296 QSLRQIHDKYWKSEKP 311
Q+L+Q+++K+WK P
Sbjct: 417 QTLQQVNEKFWKVVVP 432
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 137/147 (93%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YELNR PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELNRMPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ RVL K N+S
Sbjct: 70 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKFNQS 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKK 157
HSQ ALV SINEGIKLQSQ+R R +K
Sbjct: 130 HSQQALVHSINEGIKLQSQNRPNRKQK 156
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS--NFGIYVSPSSNNFILLPGNQS 297
++ + +++ ++ VDHL+KYL MRL L+ +++ ++ NF IY++P ++L GNQ+
Sbjct: 334 ENSVRYIKTTSNATVDHLSKYLAMRLTLDLETELPEALVNFCIYIAPQPQQLVVLSGNQT 393
Query: 298 LRQIHDKYWK-SEKPLEVYYSWKK 320
L Q+++K+WK + KPLE+YYSWKK
Sbjct: 394 LSQVNEKFWKIANKPLEMYYSWKK 417
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/148 (88%), Positives = 138/148 (93%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL+RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELHRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSRDEYEAHQ RVL K N+S
Sbjct: 70 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKFNQS 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKN 158
HSQ ALV SINEGIKLQSQ+R R +K
Sbjct: 130 HSQQALVHSINEGIKLQSQNRPNRKQKG 157
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDS-----NFGIYVSPSSNNFILLPGN 295
++ I +++ ++ +DHL+KYL MRL L+ NF IY++ N ++L GN
Sbjct: 338 ENSIRYIKTTSNATIDHLSKYLAMRLTLDLDPALPETYRLLNFCIYIAQQPNQLVVLSGN 397
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L+Q+++K+WK KPLE+YYSWKK
Sbjct: 398 QTLQQVNEKFWKVNKPLEMYYSWKK 422
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 213/394 (54%), Gaps = 88/394 (22%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 ASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L+
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLS 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTS 188
+ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T +S + + + + +S
Sbjct: 130 RLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQ-TATMSGGEGEPGEGEGDGEDVSS 188
Query: 189 NAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTS---------- 238
++ + PK P R + A +SS + ++ D
Sbjct: 189 DSAPDSAPGPAPKRP--RGAGAGASSVGTGGGAAGGACGGAGSEDSGDRGGTLGGGTLGP 246
Query: 239 ---------------------------ETDDKIST--VESATDGEVDHLTKYLTMRLRLE 269
E + T V++ + VDHL+KYL +R+ LE
Sbjct: 247 PSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALE 306
Query: 270 ----------------GSD------------------------------ICDSNFGIYVS 283
SD + + + IY++
Sbjct: 307 RRQQQETTEPGGPGGGASDTGGPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTIYIA 366
Query: 284 PSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 367 PGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/394 (40%), Positives = 211/394 (53%), Gaps = 88/394 (22%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 ASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L+
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLS 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTS 188
+ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T +S + + + + +S
Sbjct: 130 RLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQ-TATMSGGEGEPGEGEGDGEDVSS 188
Query: 189 NAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTS---------- 238
++ + PK P R + A +SS + ++ D
Sbjct: 189 DSAPDSAPGPAPKRP--RGAGAGASSVGTGGGAAGGACGGAGSEDSGDRGGTLGGGTLGP 246
Query: 239 ---------------------------ETDDKISTVESATDGE--VDHLTKYLTMRLRLE 269
E + T T G VDHL+KYL +R+ LE
Sbjct: 247 PSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALE 306
Query: 270 ----------------GSD------------------------------ICDSNFGIYVS 283
SD + + + IY++
Sbjct: 307 RRQQQETAEPGGPGGGASDTGGPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTIYIA 366
Query: 284 PSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 367 PGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|71043690|ref|NP_001020838.1| E3 ubiquitin-protein ligase RING2 [Rattus norvegicus]
gi|90101447|sp|Q4KLY4.1|RING2_RAT RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|68533722|gb|AAH98941.1| Ring finger protein 2 [Rattus norvegicus]
Length = 308
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 185/268 (69%), Gaps = 19/268 (7%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQP 185
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGP 192
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETD 241
+ N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 193 S------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT- 245
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLE 269
++++ + VDHL+KYL +RL LE
Sbjct: 246 ---RYIKTSGNATVDHLSKYLAVRLALE 270
>gi|344278451|ref|XP_003411007.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Loxodonta
africana]
Length = 384
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 199/312 (63%), Gaps = 31/312 (9%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
EAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+DCIITALRSGNKECPT
Sbjct: 78 EAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPT 137
Query: 86 CRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIK 145
CRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK ++Q AL SI EG+K
Sbjct: 138 CRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLK 197
Query: 146 LQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPK 201
+Q+ +RLQR KK N G E+N D S+ S P+ N+ +
Sbjct: 198 IQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGPS------NKRTKTSDD 250
Query: 202 SPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETDDKISTVESATDGEVDH 257
S ++ A+ + V ++ +++ + +E DD+++T ++++ + VDH
Sbjct: 251 SGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT----RYIKTSGNATVDH 306
Query: 258 LTKYLTMRLRLEG------------SDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKY 305
L+KYL +RL LE + + IY++ ++ F +L G+ SL + +KY
Sbjct: 307 LSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKY 366
Query: 306 WKSEKPLEVYYS 317
WK KP+E+YY+
Sbjct: 367 WKVNKPMELYYA 378
>gi|348545246|ref|XP_003460091.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oreochromis
niloticus]
Length = 329
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/316 (48%), Positives = 191/316 (60%), Gaps = 25/316 (7%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+R+PQEAI D TE+AVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRSPQEAIMDGTEVAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVS+RSLR D NFD LISKIYPSRDEYEAHQ RV+E+LN+
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAHQRRVIERLNR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQ--------GNEENTPDISNTDQTSVQQQP 181
H++ AL SI EG++ Q+++R R KK Q G E+N S+ S P
Sbjct: 131 LHNKEALSSSIEEGLRQQARYRNHRVKKPTQESDNTTYSGGEDNGDSRSHLSHDSA---P 187
Query: 182 SPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETD 241
S P P PEA PS + S S+ T L +
Sbjct: 188 SHTP----------HPCGQTPPEAGPSRKRPRPSEDGSGPEVDSESPTPPLRRHKEGPSS 237
Query: 242 DKISTVESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQI 301
+ I V ++ H Y R + + D + S F+ L G+ +L +
Sbjct: 238 E-IELV-FRPHPQLVHAQDYNQTRAFIVKTQ--DRKWAYLCIVQSGWFLTLNGSLTLELV 293
Query: 302 HDKYWKSEKPLEVYYS 317
++KYWK KPLE+YY+
Sbjct: 294 NEKYWKVRKPLELYYA 309
>gi|195054989|ref|XP_001994405.1| GH17005 [Drosophila grimshawi]
gi|193892168|gb|EDV91034.1| GH17005 [Drosophila grimshawi]
Length = 437
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/148 (83%), Positives = 135/148 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL R PQE ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELQRKPQEIITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEALQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKN 158
SQ ALV SINEGIKLQSQ+R QR + N
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFRTN 157
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
D+ I +++ + VDHL+KYL MRL L+ G D+ ++ NF IYV+P ++L GN
Sbjct: 352 DNCIRYIKTTANATVDHLSKYLAMRLTLDLGDDLPEACRLLNFCIYVAPQPQQLVILNGN 411
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q++D++WK KP+E+YYSWKK
Sbjct: 412 QTLHQVNDRFWKVNKPMEMYYSWKK 436
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 ASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L+
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLS 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
+ H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 130 RLHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Callithrix
jacchus]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 121/165 (73%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|198427593|ref|XP_002130931.1| PREDICTED: similar to ring finger protein 2 [Ciona intestinalis]
Length = 372
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 208/364 (57%), Gaps = 63/364 (17%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
T K+WEL+ YEL RTPQE ITDNTEIAVSPRSLHSELMCPICLDML+ TMTTKECLHRFC
Sbjct: 12 TNKTWELTPYELQRTPQEVITDNTEIAVSPRSLHSELMCPICLDMLRNTMTTKECLHRFC 71
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
S+CI TALRSGNKECPTCRKKLVS+RSLR DPNFD LI+KIYPSRDEYEAHQ +VL+ +
Sbjct: 72 SECITTALRSGNKECPTCRKKLVSRRSLRPDPNFDALIAKIYPSRDEYEAHQAKVLQNIT 131
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKK------------------------------- 157
+ H+QAAL SI EG+K Q+ RLQ+ KK
Sbjct: 132 RHHNQAALTASIEEGLKSQAASRLQKVKKQDISTPTTTQPTTGASNGDTNSGLSREKENT 191
Query: 158 --------NIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSS 209
+++ +EE D+SN+ + +++ S + +P SP SS
Sbjct: 192 DSSSQTHSSVRTSEERESDVSNSPPVNKKRKISETTEETTVTTTSGAP----SPVPETSS 247
Query: 210 AASSSTTKVSKKTAKSDVMTSELET----DDT-SETDDKISTVESATDGEVDHLTKYLTM 264
++S + KK A ++ ELE D T S+ + + ++++ V H+ +Y+ +
Sbjct: 248 NSASVEKQSVKKEAPQAALSVELELHPHPDQTGSKVEQTVRFIKTSVHATVHHVAQYIAL 307
Query: 265 RLRLE----GSDICDSNFGIYVSPSSNNFIL-------LPGNQSLRQIHDKYWKSE-KPL 312
R +E + + +Y P F+ L ++L + +KYW + +PL
Sbjct: 308 RNTVEKQTTKGTVVPTALDVY--PEYTIFVKENELYKDLELTETLETVQEKYWNPDNRPL 365
Query: 313 EVYY 316
VYY
Sbjct: 366 -VYY 368
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 150/194 (77%), Gaps = 9/194 (4%)
Query: 1 MTSTEQSGT----TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNT 172
EAHQ RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNG-DSSHC 179
Query: 173 DQTSVQQQPSPQPT 186
SV P+
Sbjct: 180 SNASVHSNQEAGPS 193
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 121/165 (73%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 339 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 386
>gi|198450246|ref|XP_001357898.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
gi|198130953|gb|EAL27034.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
Length = 439
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 357 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRLLNFCIYVAPQPQQLVILNGNQTL 416
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 417 HQVNDKFWKVNKPMEMYYSWKK 438
>gi|195158327|ref|XP_002020043.1| GL13768 [Drosophila persimilis]
gi|194116812|gb|EDW38855.1| GL13768 [Drosophila persimilis]
Length = 439
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 357 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRLLNFCIYVAPQPQQLVILNGNQTL 416
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 417 HQVNDKFWKVNKPMEMYYSWKK 438
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 355 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 405
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 46/120 (38%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE----------------GSD------------------ 272
V++ + VDHL+KYL +R+ LE SD
Sbjct: 284 VKTTGNATVDHLSKYLALRIALERRQQQETVEPGGPGGGASDTGGPDGGGGERGVSGGGE 343
Query: 273 ------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+ + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 344 GPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 403
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 354 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 401
>gi|195394708|ref|XP_002055984.1| GJ10686 [Drosophila virilis]
gi|194142693|gb|EDW59096.1| GJ10686 [Drosophila virilis]
Length = 443
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/148 (82%), Positives = 134/148 (90%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELQRKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +++ K N +
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKN 158
SQ ALV SINEGIKLQSQ+R QR + N
Sbjct: 130 QSQKALVNSINEGIKLQSQNRPQRFRTN 157
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
D+ I +++ + VDHL+KYL +RL L+ G+D+ ++ NF IYV+P ++L GN
Sbjct: 358 DNCIRYIKTTANATVDHLSKYLAIRLTLDLGADLPEACRLLNFCIYVAPQPQQLVILNGN 417
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q++DK+WK KP+E+YYSWKK
Sbjct: 418 QTLHQVNDKFWKVNKPMEMYYSWKK 442
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 139/157 (88%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|348576400|ref|XP_003473975.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cavia porcellus]
Length = 406
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 351 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 398
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus caballus]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|194745676|ref|XP_001955313.1| GF18697 [Drosophila ananassae]
gi|190628350|gb|EDV43874.1| GF18697 [Drosophila ananassae]
Length = 432
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/146 (83%), Positives = 132/146 (90%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD TEI VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDGTEIGVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
D+ + +++ + VDHL+KYL MRL L+ G D+ ++ NF IYV+P ++L GN
Sbjct: 347 DNCVRYIKTTANATVDHLSKYLAMRLTLDLGPDLPEACRLLNFCIYVAPQPQQLVILNGN 406
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q++DK+WK KP+E+YYSWKK
Sbjct: 407 QTLHQVNDKFWKVNKPMEMYYSWKK 431
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|355558944|gb|EHH15724.1| hypothetical protein EGK_01854 [Macaca mulatta]
Length = 246
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/160 (77%), Positives = 137/160 (85%), Gaps = 4/160 (2%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQTENGSGAEDN 173
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
>gi|17137804|ref|NP_477509.1| Sex combs extra [Drosophila melanogaster]
gi|50401702|sp|Q9VB08.1|RING1_DROME RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=Sex
comb extra protein; AltName: Full=dRING protein;
AltName: Full=dRING1
gi|7301619|gb|AAF56737.1| Sex combs extra [Drosophila melanogaster]
gi|16197987|gb|AAL13764.1| LD23953p [Drosophila melanogaster]
gi|220944852|gb|ACL84969.1| Sce-PA [synthetic construct]
gi|220952512|gb|ACL88799.1| Sce-PA [synthetic construct]
Length = 435
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 353 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 412
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 413 HQVNDKFWKVNKPMEMYYSWKK 434
>gi|195503706|ref|XP_002098764.1| GE10548 [Drosophila yakuba]
gi|194184865|gb|EDW98476.1| GE10548 [Drosophila yakuba]
Length = 439
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 357 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 416
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 417 HQVNDKFWKVNKPMEMYYSWKK 438
>gi|2388783|emb|CAA04797.1| DRING protein [Drosophila melanogaster]
Length = 435
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 353 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 412
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 413 HQVNDKFWKVNKPMEMYYSWKK 434
>gi|195574396|ref|XP_002105175.1| GD18065 [Drosophila simulans]
gi|194201102|gb|EDX14678.1| GD18065 [Drosophila simulans]
Length = 436
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 354 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 413
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 414 HQVNDKFWKVNKPMEMYYSWKK 435
>gi|195444500|ref|XP_002069895.1| GK11322 [Drosophila willistoni]
gi|194165980|gb|EDW80881.1| GK11322 [Drosophila willistoni]
Length = 421
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/146 (83%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELQRKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEALQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 339 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRLLNFCIYVAPQPQQLVILNGNQTL 398
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 399 HQVNDKFWKVNKPMEMYYSWKK 420
>gi|195352923|ref|XP_002042960.1| GM16329 [Drosophila sechellia]
gi|194127025|gb|EDW49068.1| GM16329 [Drosophila sechellia]
Length = 434
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 352 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 411
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 412 HQVNDKFWKVNKPMEMYYSWKK 433
>gi|194907249|ref|XP_001981516.1| GG12099 [Drosophila erecta]
gi|190656154|gb|EDV53386.1| GG12099 [Drosophila erecta]
Length = 435
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/146 (84%), Positives = 134/146 (91%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
SQ ALV SINEGIKLQSQ+R QR +
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPQRFR 155
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
+ +++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L
Sbjct: 353 VRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTL 412
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q++DK+WK KP+E+YYSWKK
Sbjct: 413 HQVNDKFWKVNKPMEMYYSWKK 434
>gi|195113599|ref|XP_002001355.1| GI10743 [Drosophila mojavensis]
gi|193917949|gb|EDW16816.1| GI10743 [Drosophila mojavensis]
Length = 440
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/148 (82%), Positives = 134/148 (90%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD
Sbjct: 10 KTWDLSLYELQRKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q +++ K N +
Sbjct: 70 CIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKN 158
SQ ALV SINEGIKLQSQ+R QR + N
Sbjct: 130 QSQKALVNSINEGIKLQSQNRPQRFRTN 157
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
D+ + +++ + VDHL+KYL +RL L+ G+D+ ++ NF IYV+P ++L GN
Sbjct: 355 DNCVRYIKTTANATVDHLSKYLAIRLTLDLGADLPEACRLLNFCIYVAPQPQQLVILNGN 414
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q++DK+WK KP+E+YYSWKK
Sbjct: 415 QTLHQVNDKFWKVNKPMEMYYSWKK 439
>gi|291229732|ref|XP_002734826.1| PREDICTED: ring finger protein 2-like [Saccoglossus kowalevskii]
Length = 300
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 177/312 (56%), Gaps = 69/312 (22%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MTS K+WELS+YEL+RTPQEAITD TEIAVSPRSLHSELMCPICLDMLK TMTT
Sbjct: 6 MTSGTSQQPNKTWELSLYELHRTPQEAITDGTEIAVSPRSLHSELMCPICLDMLKNTMTT 65
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFC +CI TALRSGNKECPTCRKKLVS+RSLR DPNFD LISKIYPSRDEYEA Q
Sbjct: 66 KECLHRFCQECITTALRSGNKECPTCRKKLVSRRSLRPDPNFDALISKIYPSRDEYEAQQ 125
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK-----NIQGN------------- 162
++L +LN+ H+Q AL SI EG+KLQ+ +R QR +K +I G+
Sbjct: 126 EKLLARLNQHHNQQALQNSIEEGLKLQAMNRAQRVRKHQSEEHIVGSNNHIDEQEASPSP 185
Query: 163 ------------EENTPDISNTDQ----TSVQQQPSPQPTTSNA-------IKNQLSPAV 199
EE DI + + TS + P + + N++
Sbjct: 186 PPPPLAPVTVDCEEEDVDIQHHHKKLKTTSEESGPEANDSVGEGCSENTETLVNEIELVF 245
Query: 200 PKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTVESATDGEVDHLT 259
PE P A+SS T+ K TA + VDHL
Sbjct: 246 KPHPEEEPVDTATSSQTRFIKTTA----------------------------NATVDHLA 277
Query: 260 KYLTMRLRLEGS 271
KYL MR+ LE
Sbjct: 278 KYLAMRMALENG 289
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 138/157 (87%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + +++ T
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPESDQTT 167
>gi|289741557|gb|ADD19526.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 415
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 138/169 (81%), Gaps = 3/169 (1%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+W+LS+YEL R PQE ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC D
Sbjct: 10 KTWDLSLYELQRKPQEIITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCQD 69
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALRSGNKECPTCRKKLVSKRSLR DPNFDLLISKIYPSR+EYEA Q +V+ K N++
Sbjct: 70 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSREEYEAIQEKVMAKFNQT 129
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK---KNIQGNEENTPDISNTDQTS 176
SQ ALV SINEGIKLQSQ+R R + +G N+ I N S
Sbjct: 130 QSQQALVNSINEGIKLQSQNRPLRFRTKGAGGRGGNHNSSHIHNVSNES 178
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 244 ISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSL 298
I +++ + VDHL+KYL +RL L+ GS++ ++ NF IY++P ++L GNQ+L
Sbjct: 333 IRYIKTTANATVDHLSKYLALRLTLDLGSELPEAYRMLNFCIYIAPQPQQLVILNGNQTL 392
Query: 299 RQIHDKYWKSEKPLEVYYSWKK 320
Q+++K+WK KP+E+YYSWKK
Sbjct: 393 HQVNEKFWKVNKPMEMYYSWKK 414
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/158 (78%), Positives = 135/158 (85%), Gaps = 3/158 (1%)
Query: 1 MTSTEQSGTT---KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKT 57
M T+ SG + KSWELS+YEL+R+PQEAITD TEIAVSPRSLHSELMCPICLDMLK T
Sbjct: 1 MAVTQASGNSQPSKSWELSLYELHRSPQEAITDETEIAVSPRSLHSELMCPICLDMLKNT 60
Query: 58 MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYE 117
TTKECLHRFC DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYE
Sbjct: 61 YTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYE 120
Query: 118 AHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRT 155
AHQ RV+ KLNK H+ AAL SI EG+K+Q+ +R QR
Sbjct: 121 AHQERVMAKLNKRHNTAALSTSIEEGLKVQALNRAQRV 158
>gi|395533944|ref|XP_003769009.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sarcophilus harrisii]
Length = 481
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 138/157 (87%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 84 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 143
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 144 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 203
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ + +++ T
Sbjct: 204 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPESDQTT 240
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 46/117 (39%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE----------------------------------GSD 272
V++ + VDHL+KYL +R+ LE G+D
Sbjct: 359 VKTTGNATVDHLSKYLALRIALERRQQQEAGEPGAPGGGVPEAGGPEGGGGEAPRTGGTD 418
Query: 273 ------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 419 GTEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 475
>gi|449682260|ref|XP_002161941.2| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Hydra
magnipapillata]
Length = 325
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 198/333 (59%), Gaps = 49/333 (14%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
KSWELS+YEL+RTPQE ITD+TEIA+SPRSLHSELMCPICLDML TMTTKECLHRFC D
Sbjct: 12 KSWELSLYELHRTPQEVITDDTEIAISPRSLHSELMCPICLDMLTNTMTTKECLHRFCHD 71
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CIITALR+GNKECPTCRKKL+SKRSLR DPNFD LI+KIYP+RDEYEAHQ + LEKL++
Sbjct: 72 CIITALRAGNKECPTCRKKLISKRSLRPDPNFDSLIAKIYPNRDEYEAHQEQALEKLHQH 131
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE-----NTPDISNTDQTSVQQQPSPQP 185
+Q AL SI EG+++Q+++RL R K + E ++ + D + Q
Sbjct: 132 TNQQALTNSIEEGLRIQARNRLNRMLKQQRKQAEHALVDHSATVKEEDSPVISQDSGEMS 191
Query: 186 TTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKIS 245
T +N SA + KVSK+ K T L TD+++ +++++
Sbjct: 192 TENN------------------DSAVMTGKHKVSKRKHKDS--TGSL-TDNSNFLNNEVN 230
Query: 246 TVES------ATD---------------GEVDHLTKYLTMRLRLEGSDICDSNFGIYVSP 284
VE A D V HL ++L R+ LE C +F + V
Sbjct: 231 EVEVLFHPHPACDILKHFKSRYLKTTGIATVAHLCQFLVTRISLEEITPC-IDFEVLVR- 288
Query: 285 SSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + L + +L +I Y K PLE+++S
Sbjct: 289 TVGEYQKLEKHLTLAEIKQLYSKDSTPLELFFS 321
>gi|355748462|gb|EHH52945.1| E3 ubiquitin-protein ligase RING1 [Macaca fascicularis]
Length = 401
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 141/168 (83%), Gaps = 1/168 (0%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCS
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCS 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 71 DCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT-PDISNTDQTS 176
H+Q AL SI EG+++Q+ HR + +++ G + I +DQT+
Sbjct: 131 LHNQQALSSSIEEGLRMQAMHRCEGQERSRSGGAQRVRRPIPGSDQTT 178
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 46/117 (39%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE----------------GSD------------------ 272
V++ + VDHL+KYL +R+ LE SD
Sbjct: 279 VKTTGNATVDHLSKYLALRIALERRQQQEAGEPGGPGGGASDTGGPDGGGGEGGGAGGGD 338
Query: 273 ------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 339 GPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 395
>gi|440909609|gb|ELR59498.1| hypothetical protein M91_02566, partial [Bos grunniens mutus]
Length = 379
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 191/343 (55%), Gaps = 63/343 (18%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
QEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECP
Sbjct: 50 QEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECP 109
Query: 85 TCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
TCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+
Sbjct: 110 TCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGL 169
Query: 145 KLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPE 204
++Q+ HR QR ++ + G+++ T +S + + + + +S++ + PK P
Sbjct: 170 RMQAMHRAQRVRRPMPGSDQTT-TMSGGEGEPGEGEGDGEDVSSDSAPDSAPGPAPKRPR 228
Query: 205 ARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTVESATDGEVDHLTKYLTM 264
++ ++ + E T V++ + VDHL+KYL +
Sbjct: 229 G--------GGGEIELVFRPHPLLVEKGEYCQTR-------YVKTTGNATVDHLSKYLAL 273
Query: 265 RLRLEG-----------------------------------------------SDICDSN 277
R+ LE + +
Sbjct: 274 RIALERRQQQEAGEPGGPGGGTSDPTAGPDGGGGEGGGAGGADGPEEPALPSLEGVSEKQ 333
Query: 278 FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+ IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 334 YTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 376
>gi|109157342|pdb|2CKL|B Chain B, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 165
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/145 (81%), Positives = 130/145 (89%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 20 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 79
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 80 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 139
Query: 130 SHSQAALVQSINEGIKLQSQHRLQR 154
++Q AL SI EG+K+Q+ +RLQR
Sbjct: 140 HNNQQALSHSIEEGLKIQAMNRLQR 164
>gi|348578003|ref|XP_003474773.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Cavia porcellus]
Length = 291
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 127/142 (89%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINK 133
Query: 130 SHSQAALVQSINEGIKLQSQHR 151
++Q AL SI EG+K+Q+ +R
Sbjct: 134 HNNQQALSHSIEEGLKIQAMNR 155
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 16/95 (16%)
Query: 235 DDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFGIYV 282
DD+++T ++++ + VDHL+KYL +RL LE + + IY+
Sbjct: 195 DDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYI 250
Query: 283 SPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 251 ATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 285
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 195/376 (51%), Gaps = 88/376 (23%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSS 209
HR QR ++ + G+++ T +S + + + + +S++ + PK P R +
Sbjct: 122 HRAQRVRRPMPGSDQ-TATMSGGEGEPGEGEGDGEDVSSDSAPDSAPGPAPKRP--RGAG 178
Query: 210 AASSSTTKVSKKTAKSDVMTSELETDDTS------------------------------- 238
A +SS + ++ D
Sbjct: 179 AGASSVGTGGGAAGGACGGAGSEDSGDRGGTLGGGTLGPPSPPGAPSPPEPGGEIELVFR 238
Query: 239 ------ETDDKIST--VESATDGEVDHLTKYLTMRLRLE----------------GSD-- 272
E + T V++ + VDHL+KYL +R+ LE SD
Sbjct: 239 PHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQETTEPGGPGGGASDTG 298
Query: 273 ----------------------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDK 304
+ + + IY++P F L G+ +L +++K
Sbjct: 299 GPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEK 358
Query: 305 YWKSEKPLEVYYSWKK 320
+WK +PLE+ Y+ K
Sbjct: 359 FWKVSRPLELCYAPTK 374
>gi|14290582|gb|AAH09070.1| Ring finger protein 1 [Mus musculus]
Length = 377
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 192/376 (51%), Gaps = 88/376 (23%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHR CSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSS 209
HR QR ++ + G+++ T +S + + + + +S++ + PK P R +
Sbjct: 122 HRAQRVRRPMPGSDQ-TATMSGGEGEPGEGEGDGEDVSSDSAPDSAPGPAPKRP--RGAG 178
Query: 210 AASSSTTKVSKKTAKSDVMTSELETDDTS------------------------------- 238
A +SS + ++ D
Sbjct: 179 AGASSVGTGGGAAGGACGGAGSEDSGDRGGTLGGGTLGPPSPPGAPSPPEPGGEIELVFR 238
Query: 239 ------ETDDKISTVESATDGE--VDHLTKYLTMRLRLE----------------GSD-- 272
E + T T G VDHL+KYL +R+ LE SD
Sbjct: 239 PHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQETAEPGGPGGGASDTG 298
Query: 273 ----------------------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDK 304
+ + + IY++P F L G+ +L +++K
Sbjct: 299 GPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEK 358
Query: 305 YWKSEKPLEVYYSWKK 320
+WK +PLE+ Y+ K
Sbjct: 359 FWKVSRPLELCYAPTK 374
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 197/370 (53%), Gaps = 61/370 (16%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WEL++YEL+R PQE ITD TEIAVSPRSL SELMCPICLD+LK TMTTKECLHRFC+
Sbjct: 6 SKNWELTLYELHRKPQEPITDGTEIAVSPRSLKSELMCPICLDILKGTMTTKECLHRFCA 65
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+CI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LI+KIYPSR+EYEAHQ ++L KLN+
Sbjct: 66 ECIVTALRSGNKECPTCRKKLVSKRSLRRDPNFDALIAKIYPSREEYEAHQDKILAKLNR 125
Query: 130 SHSQAALVQSINEGIKLQ-------SQHRLQRTKKNIQGNEE------------------ 164
H AAL +S+ + + L S R+ I GN +
Sbjct: 126 HHLSAALTRSLEQQLALSSTRSRPCSNGRVHHNSNPIDGNADAAASEDDISTRRVSHANS 185
Query: 165 ------NTPDISNTDQTSVQQQPSPQPTTS---------------NAIKNQL------SP 197
T + S P P TS N N + SP
Sbjct: 186 DTESGVETNSVGGASTLSASDLPIRVPITSALGLVDPASVGSSNQNVTGNVIGVNSTSSP 245
Query: 198 AVPKSPE----ARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTVESATDG 253
AV E P A + + S +A + + D ++ + +++ T
Sbjct: 246 AVFPEIELLLKPHPLYFAGGTIGRPSSPSAPAATRHTSSNGDGAGTSNGPVKYLKAPTIT 305
Query: 254 EVDHLTKYLTMRLRLE--GSDICDS--NFGIY-VSPSSNNFILLPGNQSLRQIHDKYWKS 308
VDHL +YLT+R+ L+ ++ D NF +Y + ++N + L S+ +++
Sbjct: 306 TVDHLCRYLTVRVNLQRLHRELTDDRINFALYSYNEATNTYTRLGSQMSIEELNRGQQPQ 365
Query: 309 EKPLEVYYSW 318
L++YY+
Sbjct: 366 SPCLDLYYAL 375
>gi|71059767|emb|CAJ18427.1| Ring1 [Mus musculus]
Length = 377
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 192/376 (51%), Gaps = 88/376 (23%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLD+LK TMTTKECLHR CSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDVLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSS 209
HR QR ++ + G+++ T +S + + + + +S++ + PK P R +
Sbjct: 122 HRAQRVRRPMPGSDQ-TATMSGGEGEPGEGEGDGEDVSSDSAPDSAPGPAPKRP--RGAG 178
Query: 210 AASSSTTKVSKKTAKSDVMTSELETDDTS------------------------------- 238
A +SS + ++ D
Sbjct: 179 AGASSVGTGGGAAGGACGGAGSEDSGDRGGTLGGGTLGPPSPPGAPSPPEPGGEIELVFR 238
Query: 239 ------ETDDKISTVESATDGE--VDHLTKYLTMRLRLE----------------GSD-- 272
E + T T G VDHL+KYL +R+ LE SD
Sbjct: 239 PHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQETAEPGGPGGGASDTG 298
Query: 273 ----------------------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDK 304
+ + + IY++P F L G+ +L +++K
Sbjct: 299 GPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEK 358
Query: 305 YWKSEKPLEVYYSWKK 320
+WK +PLE+ Y+ K
Sbjct: 359 FWKVSRPLELCYAPTK 374
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 124/142 (87%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
QEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECP
Sbjct: 1 QEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECP 60
Query: 85 TCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
TCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+
Sbjct: 61 TCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGL 120
Query: 145 KLQSQHRLQRTKKNIQGNEENT 166
++Q+ HR QR ++ + G+++ T
Sbjct: 121 RMQAMHRAQRVRRPMPGSDQTT 142
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 200/330 (60%), Gaps = 36/330 (10%)
Query: 13 WELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI 72
W+LS+YEL RT E ITD+TEI V S+H +LMCPICL++L KTM TK CLHRFCS+CI
Sbjct: 14 WKLSLYELQRTCHEVITDDTEIEVPLESIHKDLMCPICLELLNKTMATK-CLHRFCSECI 72
Query: 73 ITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
+TALR+GNK+CPTCRK+L+SKR LR D N DLLISK++P+R+E+ H+ +++E LN+S S
Sbjct: 73 VTALRAGNKKCPTCRKRLISKRCLRPDHNIDLLISKLFPNREEFNEHRNKIIENLNQSQS 132
Query: 133 QAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIK 192
+V+S+ EG+K+Q Q R NT + + +QT P+TS+ +
Sbjct: 133 HDNIVKSMTEGLKIQKQKR-----------SYNTKNKRSAEQTKSSSSNMLAPSTSSQVD 181
Query: 193 NQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSD-----VMTSELET----------DDT 237
N ++ + ++ + + V+ + D V +S++E ++
Sbjct: 182 NNVTESTVQTNGTKKKKITGLDSATVTSNIIECDGAFDGVSSSDMELIFKPHPKEMHNNN 241
Query: 238 SETDDKIST----VESATDGEVDHLTKYLTMRLRL-EGSDICDSNFGI--YVSPSSNNFI 290
+ +D I +++ V H+++YLT+RL L +G ++ N + Y+S +++ ++
Sbjct: 242 QQEEDSIKADSRYIKAPYLATVAHMSRYLTIRLNLVQGRELLSDNGDVLMYISQAADQYV 301
Query: 291 LLPGNQSLRQIHDKYW--KSEKPLEVYYSW 318
LL N +L+ + +K++ K EKP+E++YS+
Sbjct: 302 LLDNNLTLQNVQEKFFNAKKEKPMEIFYSY 331
>gi|125490343|ref|NP_001074951.1| E3 ubiquitin-protein ligase RING1 [Pan troglodytes]
gi|169234988|ref|NP_001108431.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|73914062|sp|Q8WMN5.1|RING1_MACMU RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325684|sp|A1YFY1.1|RING1_PANPA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325685|sp|A2T6X5.1|RING1_PANTR RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|17826764|emb|CAD18905.1| ring finger protein 1 [Macaca mulatta]
gi|121483824|gb|ABM54206.1| RING1 [Pan paniscus]
gi|124111107|gb|ABM91930.1| RING1 [Pan troglodytes]
Length = 377
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 374
>gi|146325683|sp|A1YER5.1|RING1_GORGO RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|120974081|gb|ABM46633.1| RING1 [Gorilla gorilla]
Length = 377
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 374
>gi|296064|emb|CAA78389.1| RING1 [Homo sapiens]
gi|3820982|emb|CAA20235.1| ring finger protein 1 [Homo sapiens]
gi|30583543|gb|AAP36016.1| ring finger protein 1 [Homo sapiens]
gi|60655933|gb|AAX32530.1| ring finger protein 1 [synthetic construct]
gi|60655935|gb|AAX32531.1| ring finger protein 1 [synthetic construct]
gi|119624088|gb|EAX03683.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|119624089|gb|EAX03684.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|123989503|gb|ABM83883.1| ring finger protein 1 [synthetic construct]
gi|123999249|gb|ABM87203.1| ring finger protein 1 [synthetic construct]
Length = 377
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 374
>gi|46237549|emb|CAE83930.1| ring finger protein 1 [Rattus norvegicus]
gi|133777213|gb|AAH98635.2| Ring finger protein 1 [Rattus norvegicus]
gi|336454745|dbj|BAK40272.1| ring finger protein 1 [Rattus norvegicus]
Length = 377
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ + G+++ T
Sbjct: 122 HRAQRVRRPMPGSDQTT 138
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 46/120 (38%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE----------------GSD------------------ 272
V++ + VDHL+KYL +R+ LE SD
Sbjct: 255 VKTTGNATVDHLSKYLALRIALERRQQQETVEPGGPGGGASDTGGPDGGGGERGVSGGGE 314
Query: 273 ------------ICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
+ + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 315 GPEEPALPSLEGVSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 374
>gi|444729120|gb|ELW69548.1| E3 ubiquitin-protein ligase RING1 [Tupaia chinensis]
Length = 403
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ + G+++ T
Sbjct: 122 HRAQRVRRPMPGSDQTT 138
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 350 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 400
>gi|55956948|emb|CAI11435.1| ring finger protein 1 [Canis lupus familiaris]
Length = 377
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ + G+++ T
Sbjct: 122 HRAQRVRRPMPGSDQTT 138
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+ K
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTK 374
>gi|345316757|ref|XP_001506883.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ornithorhynchus
anatinus]
Length = 160
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 115/130 (88%)
Query: 22 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
R P EAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNK
Sbjct: 31 RAPSEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 90
Query: 82 ECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSIN 141
ECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI
Sbjct: 91 ECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLVRLSRLHNQQALSSSIE 150
Query: 142 EGIKLQSQHR 151
EG+++Q+ HR
Sbjct: 151 EGLRMQALHR 160
>gi|226469290|emb|CAX70124.1| ring finger protein 2 [Schistosoma japonicum]
gi|226486844|emb|CAX74499.1| ring finger protein 2 [Schistosoma japonicum]
Length = 472
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/143 (71%), Positives = 122/143 (85%)
Query: 6 QSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLH 65
++ ++K+WEL++YEL+R PQE ITD T IAVSPRSL SELMCPICLD+LK TMTTKECLH
Sbjct: 4 ENASSKNWELTLYELHRKPQEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKECLH 63
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLE 125
RFCS+CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LI+KIYPSR EYEAHQ ++L
Sbjct: 64 RFCSECIITALRSGNKECPTCRKKLVSKRSLRRDPNFDALIAKIYPSRQEYEAHQDKILA 123
Query: 126 KLNKSHSQAALVQSINEGIKLQS 148
+LN+ H +AL +S+ + + L
Sbjct: 124 RLNRQHLSSALTRSLEQQLGLNG 146
>gi|256080096|ref|XP_002576319.1| polycomb-m33 interacting protein ring1b [Schistosoma mansoni]
gi|350646016|emb|CCD59293.1| polycomb-m33 interacting protein ring1b,putative [Schistosoma
mansoni]
Length = 460
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/146 (72%), Positives = 123/146 (84%), Gaps = 2/146 (1%)
Query: 3 STEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKE 62
STE + +K+WEL++YEL+R PQE ITD T IAVSPRSL SELMCPICLD+LK TMTTKE
Sbjct: 2 STENA--SKNWELTLYELHRKPQEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKE 59
Query: 63 CLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVR 122
CLHRFCS+CIITALR+GNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR EYEAHQ +
Sbjct: 60 CLHRFCSECIITALRNGNKECPTCRKKLVSKRSLRRDPNFDALISKIYPSRQEYEAHQDK 119
Query: 123 VLEKLNKSHSQAALVQSINEGIKLQS 148
+L +LN+ H AAL +S+ + + L
Sbjct: 120 ILARLNRQHLSAALTRSLEQQLGLNG 145
>gi|76157474|gb|AAX28386.2| SJCHGC04391 protein [Schistosoma japonicum]
Length = 169
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 122/141 (86%)
Query: 6 QSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLH 65
++ ++K+WEL++YEL+R PQE ITD T IAVSPRSL SELMCPICLD+LK TMTTKECLH
Sbjct: 4 ENASSKNWELTLYELHRKPQEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKECLH 63
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLE 125
RFCS+CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LI+KIYPSR EYEAHQ ++L
Sbjct: 64 RFCSECIITALRSGNKECPTCRKKLVSKRSLRRDPNFDALIAKIYPSRQEYEAHQDKILA 123
Query: 126 KLNKSHSQAALVQSINEGIKL 146
+LN+ H +AL +S+ + + L
Sbjct: 124 RLNRQHLSSALTRSLEQQLGL 144
>gi|195997493|ref|XP_002108615.1| hypothetical protein TRIADDRAFT_19102 [Trichoplax adhaerens]
gi|190589391|gb|EDV29413.1| hypothetical protein TRIADDRAFT_19102, partial [Trichoplax
adhaerens]
Length = 152
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 119/138 (86%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
ELS+YEL+R PQ AI D++E+ +S RSLHSELMCPICLD+LK TMTTKECLHRFC++CI
Sbjct: 1 ELSVYELHRQPQAAIDDDSEVTISLRSLHSELMCPICLDILKSTMTTKECLHRFCAECIT 60
Query: 74 TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
TALRSGNKECPTCRKKLVS+RSLR DPNFD LISKIYP+R+EYEA Q +VL +LNK HSQ
Sbjct: 61 TALRSGNKECPTCRKKLVSRRSLRPDPNFDALISKIYPNREEYEAQQEKVLARLNKHHSQ 120
Query: 134 AALVQSINEGIKLQSQHR 151
AL S EG+++Q+ +R
Sbjct: 121 HALQSSFEEGVRMQATNR 138
>gi|52350624|gb|AAH82771.1| Ring1 protein [Mus musculus]
Length = 154
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 110/122 (90%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HR 151
HR
Sbjct: 122 HR 123
>gi|63169173|gb|AAY34709.1| ring finger protein 1 [Bos taurus]
gi|124054128|gb|ABM89251.1| RING1 [Pongo pygmaeus]
Length = 122
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 109/121 (90%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 H 150
H
Sbjct: 122 H 122
>gi|449267318|gb|EMC78279.1| E3 ubiquitin-protein ligase RING2-A, partial [Columba livia]
Length = 124
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 109/130 (83%), Gaps = 6/130 (4%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
QEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECP
Sbjct: 1 QEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECP 60
Query: 85 TCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
TCRKKLVSKRSLR DPNFD L SRDEYEAHQ RVL KL++ H+Q AL SI EG+
Sbjct: 61 TCRKKLVSKRSLRPDPNFDAL------SRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGL 114
Query: 145 KLQSQHRLQR 154
K+Q+ HR R
Sbjct: 115 KMQALHRWGR 124
>gi|194376320|dbj|BAG62919.1| unnamed protein product [Homo sapiens]
Length = 386
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 118/157 (75%), Gaps = 20/157 (12%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL+RTPQEAI D T IAVSPRSLHSELMCPICLDMLK TMTTKEC
Sbjct: 11 SKTWELSLYELHRTPQEAIMDGTGIAVSPRSLHSELMCPICLDMLKNTMTTKEC------ 64
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
PTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++
Sbjct: 65 --------------PTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 110
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 111 LHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 147
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 333 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 380
>gi|301780836|ref|XP_002925842.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING2-like [Ailuropoda melanoleuca]
Length = 359
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 178/340 (52%), Gaps = 46/340 (13%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+++WELS YEL TPQEA TD E VSP SLHSE MCP+C+D LK TMT KE L FC+
Sbjct: 14 SRTWELSFYELRXTPQEAKTDGLEFVVSPPSLHSEFMCPVCVDTLKNTMTAKERLRCFCA 73
Query: 70 DCIITALRSGNKEC---------PTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
+C ITAL SGNKEC PTC K LVS+RSLR DPNFD LISKIYPS EYE HQ
Sbjct: 74 ECTITALGSGNKECLGVPGWCKYPTCWKMLVSERSLRPDPNFDALISKIYPSCGEYEVHQ 133
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
R L + + A+ S EG+K+ + R Q KK T Q+S +Q
Sbjct: 134 ERELAMIXQ-----AVSDSTGEGLKIXAMDRXQXGKKQ---------QTEXTWQSSRRQD 179
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTS-- 238
S S+A+++ P S + + S S + A V+ E +
Sbjct: 180 SSDSAHCSSALRHSNQEGGPSSKQTKASDDPQREPDNSSARVATDPVLDGASEIEXVFRP 239
Query: 239 -----ETDDKISTVESATDGEVDHLTKYLTMRLRLE--GSDICDSN-----------FGI 280
E DD T +AT VDH +KYL +R LE GS+ + + I
Sbjct: 240 HFILIEKDDSTQTRXNAT---VDHGSKYLAVRSALEELGSEGKPNQMNLNTASEKPXYTI 296
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
Y + +S F +L G+ SL+ + YWK KP+E+YY+ +K
Sbjct: 297 YTATASGXFTVLNGSFSLQSTTEXYWKVNKPMELYYAPQK 336
>gi|343781184|pdb|3RPG|C Chain C, Bmi1RING1B-Ubch5c Complex Structure
Length = 121
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/103 (89%), Positives = 96/103 (93%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 19 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 78
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPS
Sbjct: 79 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPS 121
>gi|109158141|pdb|2H0D|B Chain B, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 100
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/100 (90%), Positives = 93/100 (93%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+D
Sbjct: 1 KTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCAD 60
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIY 110
CIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIY
Sbjct: 61 CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIY 100
>gi|119579142|gb|EAW58738.1| hCG1642036 [Homo sapiens]
Length = 138
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 102/126 (80%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
N EAITD EI VSPRSLHS+LMCPICLDMLK TMTTKE LHRFC+DC I ALRSGN
Sbjct: 4 NEHLSEAITDGLEIVVSPRSLHSDLMCPICLDMLKNTMTTKESLHRFCADCNIIALRSGN 63
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSI 140
KEC TC KKLVSKRS R DP FD LISKIYPSRDEYEAHQ RVL +++K ++Q AL SI
Sbjct: 64 KECLTCWKKLVSKRSPRPDPKFDALISKIYPSRDEYEAHQERVLVRISKHNNQQALSHSI 123
Query: 141 NEGIKL 146
EG+K+
Sbjct: 124 EEGLKI 129
>gi|395825224|ref|XP_003785839.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Otolemur garnettii]
Length = 246
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 154/308 (50%), Gaps = 81/308 (26%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
DCIITALRSG RDEYEAHQ RVL ++NK
Sbjct: 74 DCIITALRSG--------------------------------XRDEYEAHQERVLARINK 101
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
++Q AL SI EG+K+Q+ +RLQR KK N D ++ S S Q
Sbjct: 102 HNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQ----- 156
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTVES 249
EA PS +K+T SD S LE D+ + T ++
Sbjct: 157 --------------EAGPS----------NKRTKTSD--DSGLELDNNNAT----VAIDP 186
Query: 250 ATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSE 309
DG + + +E D + L G+ SL + +KYWK
Sbjct: 187 VMDGASEIELVFRPHPTLMEKDDSAQTR--------------LNGSFSLELVSEKYWKVN 232
Query: 310 KPLEVYYS 317
KP+E+YY+
Sbjct: 233 KPMELYYA 240
>gi|339243901|ref|XP_003377876.1| ATPase, AAA family [Trichinella spiralis]
gi|316973259|gb|EFV56879.1| ATPase, AAA family [Trichinella spiralis]
Length = 1151
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
T K W+++ YE R + ITD++ +++SPRSL SELMCPICLDMLK TMTTKECLHRFC
Sbjct: 18 TGKVWQMTAYERQRVRHDPITDDSVLSLSPRSLSSELMCPICLDMLKNTMTTKECLHRFC 77
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
DCI TALRSGNKECPTCR KLVSKRSLR DPNFD +I+KIYPSR+EY+A + +K+
Sbjct: 78 QDCITTALRSGNKECPTCRCKLVSKRSLRPDPNFDGIITKIYPSREEYDAMEAEAFDKMK 137
Query: 129 KSHSQAALVQSINEGIKLQSQ-HRLQR 154
K HS +L +SI EG+K QSQ RL R
Sbjct: 138 KHHSTISLQRSIQEGMKFQSQLRRLNR 164
>gi|340375342|ref|XP_003386195.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like
[Amphimedon queenslandica]
Length = 935
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 90/103 (87%)
Query: 13 WELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI 72
W+LS+YE+ R P + +TD + + +SPR+LHSELMCPICLD++K TTKECLHRFC +CI
Sbjct: 14 WDLSLYEVQRKPHDVVTDGSLLRISPRALHSELMCPICLDLMKNAQTTKECLHRFCQECI 73
Query: 73 ITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDE 115
ITALRSGNKECPTCRKKL SKRSLR+DPNFD LI+KIYP+RDE
Sbjct: 74 ITALRSGNKECPTCRKKLASKRSLRSDPNFDALIAKIYPNRDE 116
>gi|395512454|ref|XP_003760454.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING1-like [Sarcophilus harrisii]
Length = 438
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 105/148 (70%), Gaps = 6/148 (4%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+++WELS++EL RTP EAI D TEI VSP SL ELM PI LDMLK T TKECLH F
Sbjct: 11 SRTWELSLHELRRTPXEAIMDGTEIDVSPPSLQLELMFPIYLDMLKNTXDTKECLHHFSX 70
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+CI+T L SGNKECPT R+KLV K SL A+PNFD LIS+IYPS+++ V+ L++
Sbjct: 71 NCIVTVLXSGNKECPTSRQKLVLKWSLXAEPNFDALISQIYPSQEDC------VIIGLSR 124
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKK 157
H+Q AL + EGI +Q+ HR+ ++
Sbjct: 125 LHNQQALSSIVEEGIWMQAMHRVHXVRR 152
>gi|170594563|ref|XP_001902033.1| ring finger protein 1 [Brugia malayi]
gi|158590977|gb|EDP29592.1| ring finger protein 1, putative [Brugia malayi]
Length = 494
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 108/146 (73%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+ EL+ Y+ R P +AI+D+TEI +S R L SEL CPICLD+L TMTTKECLHRFCS+
Sbjct: 14 KTLELTEYDRFRRPHKAISDSTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSE 73
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI TAL GNKECPTCRKKLVSKRSLR DPNFD LI+KI+P R YE Q + +E ++
Sbjct: 74 CITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQ 133
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
+ AL +SI G+K Q+ +R QR +
Sbjct: 134 SNVEALQKSIEAGMKAQAANRRQRVQ 159
>gi|402586446|gb|EJW80384.1| hypothetical protein WUBG_08707 [Wuchereria bancrofti]
Length = 492
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 108/146 (73%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+ EL+ Y+ R P +AI+D+TEI +S R L SEL CPICLD+L TMTTKECLHRFCS+
Sbjct: 14 KTLELTEYDRFRRPHKAISDSTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSE 73
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI TAL GNKECPTCRKKLVSKRSLR DPNFD LI+KI+P R YE Q + +E ++
Sbjct: 74 CITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQ 133
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
+ AL +SI G+K Q+ +R QR +
Sbjct: 134 SNVEALQKSIEAGMKAQAANRRQRVQ 159
>gi|393912535|gb|EFO27171.2| ring finger protein 1 [Loa loa]
Length = 491
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 107/146 (73%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+ EL+ Y+ R P +AI+D TEI +S R L SEL CPICLD+L TMTTKECLHRFCS+
Sbjct: 14 KTLELTEYDRYRRPHKAISDLTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSE 73
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI TAL GNKECPTCRKKLVSKRSLR DPNFD LI+KI+P R YE Q + +E ++
Sbjct: 74 CITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQ 133
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
+ AL +SI G+K Q+ +R QR +
Sbjct: 134 SNVEALQKSIEAGMKAQAANRRQRVQ 159
>gi|324509377|gb|ADY43948.1| E3 ubiquitin-protein ligase RING2 [Ascaris suum]
Length = 524
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 112/155 (72%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
++ + + K+ EL+ Y+ R P +AITD++EI +S R L +EL CPICLD+L TMTTK
Sbjct: 6 SAPDTAAGGKTLELTEYDAQRRPHKAITDSSEIRISTRLLSAELCCPICLDLLTTTMTTK 65
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCS+CI TAL GNKECPTCRKKLVSKRSLR DPNFD LI+KI+P R YE Q
Sbjct: 66 ECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQ 125
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
+ ++ ++ + AL +SI G+K Q+ +R QR +
Sbjct: 126 KAMDIFHQQSNVEALQKSIEAGMKAQAANRRQRVQ 160
>gi|312067777|ref|XP_003136903.1| ring finger protein 1 [Loa loa]
Length = 515
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 107/146 (73%)
Query: 11 KSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
K+ EL+ Y+ R P +AI+D TEI +S R L SEL CPICLD+L TMTTKECLHRFCS+
Sbjct: 14 KTLELTEYDRYRRPHKAISDLTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSE 73
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
CI TAL GNKECPTCRKKLVSKRSLR DPNFD LI+KI+P R YE Q + +E ++
Sbjct: 74 CITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQ 133
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTK 156
+ AL +SI G+K Q+ +R QR +
Sbjct: 134 SNVEALQKSIEAGMKAQAANRRQRVQ 159
>gi|240952154|ref|XP_002399328.1| RING1B protein, putative [Ixodes scapularis]
gi|215490534|gb|EEC00177.1| RING1B protein, putative [Ixodes scapularis]
Length = 283
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 163/351 (46%), Gaps = 100/351 (28%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
M+S++ T ++WELS+YEL+RTPQ+ ITD TEIAVSPRSLHSELMC
Sbjct: 1 MSSSDTQTTNRTWELSLYELHRTPQDVITDGTEIAVSPRSLHSELMC------------- 47
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
P C D+L ++ +
Sbjct: 48 -----------------------PIC---------------LDML-------KNTMTTKE 62
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ 180
RVL KLNK HSQA L SI EG+++Q+ +R QR +KN +EEN+ T Q
Sbjct: 63 ERVLAKLNKQHSQA-LAHSIEEGMRMQALNRGQRVRKN--ASEENS--------TGGQAP 111
Query: 181 PSPQPTT---SNAIKNQLSPAVPKSPEAR-------PSSAASSSTTKVSKKTAKSDVMTS 230
+P T S + N S + + R P++A S+ T +T ++D +
Sbjct: 112 STPTAGTACVSTPVANSPSSTSSTTSQPRKKPKTSVPTTAQSNDTESAGGETEETDADDA 171
Query: 231 ELETDDTSETD---------------DKISTVESATDGEVDHLTKYLTMRLRLEGSDICD 275
+ TSE + ++ +++ + VDHL+KYL MRL L+ +
Sbjct: 172 GSDAAQTSEIELVFKPQPQLLLEDSSAQVRYIKTTANATVDHLSKYLAMRLALDKLEQDA 231
Query: 276 SN------FGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYSWKK 320
S F IY++ + F L GN +L Q+++KYWK KPLE+YY+ +K
Sbjct: 232 SAPRSVPPFTIYIAVTPGQFTPLSGNMTLDQVNEKYWKVNKPLEMYYAHRK 282
>gi|403266317|ref|XP_003925336.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 65/70 (92%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSG 79
DCIITALRSG
Sbjct: 74 DCIITALRSG 83
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 232 LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFG 279
+E DD+++T ++++ + VDHL+KYL +RL LE + +
Sbjct: 165 MEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYT 220
Query: 280 IYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 221 IYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 258
>gi|332811389|ref|XP_003308686.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
troglodytes]
gi|397489265|ref|XP_003815651.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
paniscus]
gi|402857837|ref|XP_003893445.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Papio
anubis]
gi|426333042|ref|XP_004028096.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Gorilla
gorilla gorilla]
gi|441624474|ref|XP_004088993.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nomascus
leucogenys]
gi|119611593|gb|EAW91187.1| ring finger protein 2, isoform CRA_a [Homo sapiens]
gi|193787177|dbj|BAG52383.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 65/70 (92%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSG 79
DCIITALRSG
Sbjct: 74 DCIITALRSG 83
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 232 LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFG 279
+E DD+++T ++++ + VDHL+KYL +RL LE + +
Sbjct: 165 MEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYT 220
Query: 280 IYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 221 IYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 258
>gi|297281250|ref|XP_001108188.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Macaca
mulatta]
Length = 206
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 65/70 (92%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMTTKECLHRFC+
Sbjct: 14 SKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCA 73
Query: 70 DCIITALRSG 79
DCIITALRSG
Sbjct: 74 DCIITALRSG 83
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 142/262 (54%), Gaps = 6/262 (2%)
Query: 14 ELSMYELNRTPQEAITD-NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI 72
+ +++++ R P+ +TD N +S R L+++L CPICL ++K+TM ECLHRFC +CI
Sbjct: 43 DCTLFDIYRQPRAPVTDPNATRTLSVRQLNADLTCPICLGIIKETMVVMECLHRFCGECI 102
Query: 73 ITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS-H 131
TA+R N+ECP+CR + SKRSLR D NFD LI KI+P+ E+E ++ +++EK+N++ H
Sbjct: 103 STAIRHSNRECPSCRIHIPSKRSLRPDANFDALIRKIHPNLAEFERNEDQIIEKVNRTRH 162
Query: 132 SQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSV-QQQPSPQPTTSNA 190
A +S G+ Q+ R + +K +G + +NT V +++ SP + N
Sbjct: 163 FHNAYTESARMGVLSQAATR-RNGRKKTEGATSASSSPTNTPSPPVGEKRDSPDGGSPND 221
Query: 191 IKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKISTVESA 250
+ A + + A+S V+ E E + + + + T ++
Sbjct: 222 TAPSSAAASEDESARKKAKIAASKPADTVADRVNFRVLLHEDEQPNAPKLERTLFT--TS 279
Query: 251 TDGEVDHLTKYLTMRLRLEGSD 272
++ HL K+L L+L+ D
Sbjct: 280 PKLKIRHLKKHLAALLKLDTYD 301
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 29/280 (10%)
Query: 14 ELSMYELNRTPQEAITDNTEI-AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI 72
+ +++++ R P+ +TD +S R L+++L CPICL ++K+TM ECLHRFC DCI
Sbjct: 48 DCTLFDIYRQPRAPVTDPAATKTLSVRQLNADLTCPICLGIIKETMVVMECLHRFCGDCI 107
Query: 73 ITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS-H 131
TA+R +ECP+CR + SKRSLR DPNFD LISKI+P+ E+E ++ ++++ N++ H
Sbjct: 108 STAIRQSKRECPSCRIHIPSKRSLRPDPNFDALISKIHPNLAEFERNEDLIIQQQNRTRH 167
Query: 132 SQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAI 191
A +S G+ Q+ R ++ +G + S+ + P T
Sbjct: 168 FNNAYTESTRMGVLSQAASRRHGGRRKAEGTASAS---SSRPSSPSNGSTGASPPTG--- 221
Query: 192 KNQLSPAVPKSPEARPSSAASSSTTKVSKKT--------------AKSD-----VMTSEL 232
+ + SP E PSSAA+S KK +SD V+ E
Sbjct: 222 EKRSSPGGGSPSETAPSSAAASEDESARKKQRVDSAAASAIASKPKESDRVTLRVLLHED 281
Query: 233 ETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEGSD 272
E D + + + T + ++ HL K+L L+L+ D
Sbjct: 282 EQSDAPKLERTLFTTFAKL--KIRHLKKHLAALLKLDKYD 319
>gi|440791566|gb|ELR12804.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 561
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
Query: 15 LSMYELNRTPQEAITD-NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
L++YE R P D N + R L+ EL CPICL ++++TMT ECLHRFC +CI
Sbjct: 97 LTLYETYREPIAPPEDPNHTTTLQVRMLNVELTCPICLGIMRQTMTVMECLHRFCDECIS 156
Query: 74 TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
LR G KECPTCR S+R LR DPNFD LI+ +YP+ DEYEA + + +NK ++
Sbjct: 157 KCLRWGKKECPTCRVHCSSRRHLRPDPNFDALIATVYPNLDEYEAQEQEFIADINKRMNR 216
Query: 134 AALVQSINEGIKLQ 147
+L S+ +G+ Q
Sbjct: 217 KSLTDSVEKGLMRQ 230
>gi|363746252|ref|XP_003643585.1| PREDICTED: E3 ubiquitin-protein ligase RING2-B-like, partial
[Gallus gallus]
Length = 193
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 76/115 (66%), Gaps = 8/115 (6%)
Query: 80 NKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQS 139
NKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KL++ H+Q AL S
Sbjct: 3 NKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSS 62
Query: 140 INEGIKLQSQHRLQRTKK--------NIQGNEENTPDISNTDQTSVQQQPSPQPT 186
I EG+K+Q+ HR QR +K G E+N S+ S P P+
Sbjct: 63 IEEGLKMQAMHRAQRVRKLHAESDNATFSGGEDNCDSRSHLSTASAPSHPEAGPS 117
>gi|325182454|emb|CCA16906.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Query: 16 SMYELNRTPQEAITD-NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
++Y++ R P++ + D + + R L+S L CPICL ++ +TM ECLHRFC +CI
Sbjct: 51 TLYDIYRQPRKPVIDPDATKVLHVRDLNSNLTCPICLGLINQTMVVMECLHRFCGECIQK 110
Query: 75 ALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS-Q 133
LR KECP+CR + SKR+LR D NFD LI+ IYP+R E+E + +++E LN+S + +
Sbjct: 111 CLRLAIKECPSCRIHIPSKRALRRDLNFDALIATIYPNRQEFEQQEAQLIEDLNRSRNYK 170
Query: 134 AALVQSINEGIKLQSQHRLQRTKKNIQG 161
L S+ G++ + R QR +K+ +G
Sbjct: 171 NILTNSVKRGLENEVSTRKQRGRKSFKG 198
>gi|326437022|gb|EGD82592.1| hypothetical protein PTSG_11982 [Salpingoeca sp. ATCC 50818]
Length = 267
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Query: 15 LSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
L+ YE R PQ+ I+D ++V + E+ CPICL +++ T T CLHRFC++CI
Sbjct: 11 LTEYEQQRQPQKVISDGRSVSVPIHIFNEEVRCPICLGLIENTYTAMSCLHRFCAECIQK 70
Query: 75 ALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQA 134
LR G KECPTCR L S+R LR D FD +IS +YPSRD Y+ Q +++K +S ++
Sbjct: 71 CLRLGKKECPTCRAPLASRRRLRRDDMFDQIISTVYPSRDIYDEQQSALVDKTLESSNRQ 130
Query: 135 ALVQSINEGIKLQSQHRLQRTK 156
LV+++ EG+ Q++ R QR K
Sbjct: 131 FLVRAMVEGMMHQAKAR-QRAK 151
>gi|326437562|gb|EGD83132.1| ring finger protein 1 [Salpingoeca sp. ATCC 50818]
Length = 348
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
ELS YE R P + T I L +++ CPICL+++++TM T EC+HRFC +CI
Sbjct: 4 ELSEYERQREPHKLQTGEEMIETYWPELVAQMKCPICLNLIEETMAT-ECMHRFCGECIK 62
Query: 74 TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
+LR KECPTCRK SKR LR DPNFD LI ++P D E +Q +++E+L+++ +
Sbjct: 63 RSLRHSKKECPTCRKPCASKRVLRRDPNFDELIQTLFPDPDVVEDYQEQLMERLHQTTNM 122
Query: 134 AALVQSINEGIKLQSQHRLQRT---KKNIQGNEENTPDIS 170
A+ QS+ EG++ Q+ R RT ++I P +S
Sbjct: 123 RAVAQSMQEGMQHQALQRKIRTSTINRSIAQRHAAVPTVS 162
>gi|313224953|emb|CBY20745.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 64/74 (86%)
Query: 58 MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYE 117
MTTKECLHRFC +CI TALRSGNKECPTCRK+LVS+RSLR DP FD LI+K+YP+RDEYE
Sbjct: 1 MTTKECLHRFCQECITTALRSGNKECPTCRKRLVSRRSLRHDPIFDALIAKLYPARDEYE 60
Query: 118 AHQVRVLEKLNKSH 131
HQ ++L ++ + H
Sbjct: 61 KHQTQLLSEVMQKH 74
>gi|48475210|gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 44/311 (14%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 101 ILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 160
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAH-QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRL 152
RSLR DPN+D LI +YP D+YE Q + E + +S+ K
Sbjct: 161 RSLRDDPNYDALILALYPDIDKYEEEIQASIAETFRRQSEALVKKRSV---AKATGSTIT 217
Query: 153 QRTKKNIQGNEEN---TPDISNTD-QTSVQQQPSPQPTTSNAIKNQLSP----------A 198
+RT+ N++ +PDI TD + + + + + ++ + SP
Sbjct: 218 RRTRGNMRAKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDRSPDVRQKRVRRWP 277
Query: 199 VPKSPEARPSSAASSSTTKVSKKTAKSDVM-TSELETD-----------DTSETDDKIST 246
VP+S A+ SS + + D+M TS L + T + S+
Sbjct: 278 VPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTSPLRGEMLAWGKNGTRSQTRHGNSGGSS 337
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGN-QSLRQIHDKY 305
A G V L +Y L +D D+ F +Y +LLP N QS+ ++ Y
Sbjct: 338 GRMAKGGRVTKLVEY------LRNTDEFDNKFNLY-------LVLLPLNGQSMPKLEKPY 384
Query: 306 WKSEKPLEVYY 316
+ V +
Sbjct: 385 LSCQPTFSVRH 395
>gi|224000760|ref|XP_002290052.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
gi|220973474|gb|EED91804.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
Length = 331
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 15 LSMYELNRTPQ-EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
L++++++R P+ E + + V + L E CP+CL +K+T KECLHRFC++CI
Sbjct: 66 LTLFDIHREPRRENVDPEARVRVQLKVLSPEFHCPVCLSYIKQTRIVKECLHRFCNECIQ 125
Query: 74 TALR-SGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
LR S KECP CR + S+RSLR DPNFD LI IY + +E E + + +LN+ +
Sbjct: 126 KCLRVSPKKECPQCRVHIPSRRSLRPDPNFDNLIKSIYGNLEELEKFEEEEIMRLNRDQN 185
Query: 133 Q-AALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQ 179
A +S GI QS HR +R Q N+ +P ++TD T+ +Q
Sbjct: 186 MNNAYAESRKRGILHQSMHRKKR-----QSNQGESPRPTDTDNTTSRQ 228
>gi|297740412|emb|CBI30594.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 18 YELNRTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL 76
YE +R+P + + E + V + E+ CPICL +++KT T ECLHRFC +CI ++
Sbjct: 33 YESDRSPSWSNGEKDEFVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSM 92
Query: 77 RSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL--EKLNKSHSQA 134
R GN ECP CR S+RSLR DPN+D LI+ +YP D+YE ++ EK QA
Sbjct: 93 RLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQA 152
Query: 135 ALVQSI 140
++ Q++
Sbjct: 153 SIAQTL 158
>gi|359483484|ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 534
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 18 YELNRTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL 76
YE +R+P + + E + V + E+ CPICL +++KT T ECLHRFC +CI ++
Sbjct: 134 YESDRSPSWSNGEKDEFVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSM 193
Query: 77 RSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL--EKLNKSHSQA 134
R GN ECP CR S+RSLR DPN+D LI+ +YP D+YE ++ EK QA
Sbjct: 194 RLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQA 253
Query: 135 ALVQSI 140
++ Q++
Sbjct: 254 SIAQTL 259
>gi|390475616|ref|XP_003734987.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING2-like [Callithrix jacchus]
Length = 461
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 131/276 (47%), Gaps = 41/276 (14%)
Query: 10 TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
TK ELS+ EL PQE +TD E V P SLHSE++ I L +LK TMTTKECL F S
Sbjct: 14 TKRRELSLCELXXIPQEVVTDGLETVVLPPSLHSEIIRLIRLHVLKDTMTTKECLQHFSS 73
Query: 70 DCIITALRSGNKECPTCRKKLVSK----------RSLRADPNFDLLISKIYPSRDEYEAH 119
CII LR+GNK+CPTC+KK + L A D +SKIY S DE+EA
Sbjct: 74 VCIIIVLRNGNKKCPTCQKKKKKSGFQKITKGIFQLLAASKKSDAFVSKIYASHDEHEAL 133
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGN----EENTPDISNTDQT 175
RV +EG+K+ ++ R Q+ +K N EE + D +
Sbjct: 134 GERVY----------------SEGLKVPARSRXQQGRKQRAXNGSRAEEEAHGLHXGDAS 177
Query: 176 --SVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELE 233
S Q+ T + + L + A S +S + K + + +E
Sbjct: 178 TQSNQETGHSHKWTKTSADSGLELDTNNATFAVDSGMDDASEIEFVFK-----LHPTYME 232
Query: 234 TDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE 269
DD ++ + + + + + HL+KYLT++L LE
Sbjct: 233 KDDRAQ----MRCINTPGNTAISHLSKYLTVKLALE 264
>gi|414870716|tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 467
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 20/223 (8%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 95 VRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 154
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ----------- 149
N+D LI+ +YP D+YE ++ E+ N + Q + SI E + QS+
Sbjct: 155 NYDALIAALYPDIDKYEEEELAFNEEENDRNKQ--IQASIAEAFRKQSEVIGRKSTAKAT 212
Query: 150 --HRLQRTKKNIQGNEENT----PDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSP 203
++R+++NI+ N +NT +++D ++ + + + S A SP
Sbjct: 213 AAAFVRRSRRNIRPNGQNTYFRGRGKASSDDVALACSEDEEDGNGESCSKEASSAEESSP 272
Query: 204 EARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDDKIST 246
E + T + S A +D + S+ E DD + + ST
Sbjct: 273 EKKQKRLPKWPTPRSSPARACNDEVASD-EKDDVGISRENFST 314
>gi|224125396|ref|XP_002329795.1| predicted protein [Populus trichocarpa]
gi|222870857|gb|EEF07988.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 35/225 (15%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ V + E+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 66 VVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 125
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAHQVRVL--EKLNKSHSQAALVQSINEGIKLQSQHR 151
RSLR DPN+D LI+ +YP D+YE ++ EK QA + Q+ + + S+ R
Sbjct: 126 RSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQAEALSRKR 185
Query: 152 ---------------------LQRTKKN-----IQGNEEN-------TPDISNTDQTSVQ 178
R ++N +QG+++N D S+TD+ S +
Sbjct: 186 STAKATAAVFARRTPSRFRDAHSRGRRNYRIAELQGSDDNEDANGGGGKDSSSTDEHSAE 245
Query: 179 QQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTA 223
+P S A S S + S AS+ S++ A
Sbjct: 246 VKPKRYRRCSAAFNADGSGGENDSEVNKESVGASAGLISSSERLA 290
>gi|293331775|ref|NP_001169665.1| uncharacterized LOC100383546 [Zea mays]
gi|224030721|gb|ACN34436.1| unknown [Zea mays]
gi|414880136|tpg|DAA57267.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 474
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP+CR S+RSLR DP
Sbjct: 98 IRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDP 157
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
N+D LI+ +YP D+YE ++ E+ + + + ++I E + QSQ
Sbjct: 158 NYDALIAALYPDIDKYEEEELAFNEQEMTRNQK--IQETIEETFRRQSQ 204
>gi|195650523|gb|ACG44729.1| protein binding protein [Zea mays]
gi|413919170|gb|AFW59102.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 487
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 6 QSGTTKSWELSMYELNRTP--------QEAITDNTEIAVSPRSLHSELMCPICLDMLKKT 57
Q TT W + E TP A T + + V + E+ CPICL +++KT
Sbjct: 66 QIATTSRWVAAADETEPTPTSSRSYHPMRAGTMDEFMLVKLAEIRKEVQCPICLGIIRKT 125
Query: 58 MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYE 117
T ECLHRFC DCI ++R GN ECP CR S+RSLR DPN+D LI+ +YP D+YE
Sbjct: 126 RTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYE 185
Query: 118 AHQVRVLEK 126
+ E+
Sbjct: 186 EEEFAFSEQ 194
>gi|413919169|gb|AFW59101.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 497
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 6 QSGTTKSWELSMYELNRTP--------QEAITDNTEIAVSPRSLHSELMCPICLDMLKKT 57
Q TT W + E TP A T + + V + E+ CPICL +++KT
Sbjct: 66 QIATTSRWVAAADETEPTPTSSRSYHPMRAGTMDEFMLVKLAEIRKEVQCPICLGIIRKT 125
Query: 58 MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYE 117
T ECLHRFC DCI ++R GN ECP CR S+RSLR DPN+D LI+ +YP D+YE
Sbjct: 126 RTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYE 185
Query: 118 AHQVRVLEK 126
+ E+
Sbjct: 186 EEEFAFSEQ 194
>gi|357128851|ref|XP_003566083.1| PREDICTED: uncharacterized protein LOC100846593 [Brachypodium
distachyon]
Length = 917
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 110 IVVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSR 169
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQ 153
RSLR DPNFD LI +YP D+YE + + + ++ ALV+ + + S + +
Sbjct: 170 RSLRDDPNFDALILALYPDIDKYEEEIQESIAETFRRQTE-ALVKKRSTAKAIASSRKTR 228
Query: 154 RTKKNIQGNEENTPDISNTD 173
+ + ++PDI +D
Sbjct: 229 GNLRAKRRGRTSSPDIVTSD 248
>gi|222632098|gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japonica Group]
Length = 821
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 56/324 (17%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 85 ILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 144
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRL- 152
RSLR DPN+D LI +YP D+YE ++ E+ + + + SI E + QS+ +
Sbjct: 145 RSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKK--IQASIAETFRRQSEALVK 202
Query: 153 -------------QRTKKNIQGNEEN---TPDISNTD-QTSVQQQPSPQPTTSNAIKNQL 195
+RT+ N++ +PDI TD + + + + + ++ +
Sbjct: 203 KRSVAKATGSTITRRTRGNMRAKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDR 262
Query: 196 SP----------AVPKSPEARPSSAASSSTTKVSKKTAKSDVM-TSELETD--------- 235
SP VP+S A+ SS + + D+M TS L +
Sbjct: 263 SPDVRQKRVRRWPVPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTSPLRGEMLAWGKNGT 322
Query: 236 --DTSETDDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLP 293
T + S+ A G V L +Y L +D D+ F +Y +LLP
Sbjct: 323 RSQTRHGNSGGSSGRMAKGGRVTKLVEY------LRNTDEFDNKFNLY-------LVLLP 369
Query: 294 GN-QSLRQIHDKYWKSEKPLEVYY 316
N QS+ ++ Y + V +
Sbjct: 370 LNGQSMPKLEKPYLSCQPTFSVRH 393
>gi|242039065|ref|XP_002466927.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
gi|241920781|gb|EER93925.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
Length = 207
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 15/139 (10%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 35 VRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 94
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ----------- 149
N+D LI+ +YP D+YE ++ E+ N + Q + SI E + QS+
Sbjct: 95 NYDALIAALYPDIDKYEEEELAFNEEENDRNKQ--IQASIAEAFRKQSEVIGRKSTAKAT 152
Query: 150 --HRLQRTKKNIQGNEENT 166
++R+++NI+ N +NT
Sbjct: 153 AAAFVRRSRRNIRPNGQNT 171
>gi|294462674|gb|ADE76882.1| unknown [Picea sitchensis]
Length = 475
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ V+ ++ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 53 VLVNLAAIREEMQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 112
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ IYP D+Y
Sbjct: 113 RSLRDDPNYDALIAAIYPDLDKY 135
>gi|226507818|ref|NP_001146078.1| uncharacterized LOC100279610 [Zea mays]
gi|219885587|gb|ACL53168.1| unknown [Zea mays]
gi|413919168|gb|AFW59100.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 475
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+RSLR DP
Sbjct: 97 IRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDP 156
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEK 126
N+D LI+ +YP D+YE + E+
Sbjct: 157 NYDALIAALYPDIDKYEEEEFAFSEQ 182
>gi|242076968|ref|XP_002448420.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
gi|241939603|gb|EES12748.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
Length = 493
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECPTCR S+RSLR DP
Sbjct: 107 IRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPTCRTHCASRRSLRDDP 166
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQS 148
+D LI+ +YP D+YE + E+ + H++ + ++I E + QS
Sbjct: 167 KYDALIAALYPDIDKYEEEEFAFSEQ-ERIHNK-KIQETIEETFRRQS 212
>gi|218189211|gb|EEC71638.1| hypothetical protein OsI_04070 [Oryza sativa Indica Group]
Length = 491
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 102 IIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 161
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP D+Y
Sbjct: 162 RSLRDDPNYDALIAALYPDIDKY 184
>gi|297597780|ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
gi|53792319|dbj|BAD53026.1| putative ring finger protein 1 [Oryza sativa Japonica Group]
gi|215767809|dbj|BAH00038.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619392|gb|EEE55524.1| hypothetical protein OsJ_03751 [Oryza sativa Japonica Group]
gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa Japonica Group]
Length = 489
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 100 IIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 159
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP D+Y
Sbjct: 160 RSLRDDPNYDALIAALYPDIDKY 182
>gi|357125426|ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Brachypodium distachyon]
Length = 481
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 92 ILVKLAEIRKEFQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 151
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP D+Y
Sbjct: 152 RSLRDDPNYDALIATLYPDIDKY 174
>gi|449434332|ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
gi|449479584|ref|XP_004155643.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 427
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
IAV + E+ CPICL ++KKT T ECLHRFC +CI ++R GNKECP CR S+
Sbjct: 52 IAVKLSDIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNKECPACRTHCASR 111
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP ++Y
Sbjct: 112 RSLRDDPNYDTLIAVLYPDIEKY 134
>gi|224079177|ref|XP_002305782.1| predicted protein [Populus trichocarpa]
gi|222848746|gb|EEE86293.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ V + E+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 77 VVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 136
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LIS +YP D+Y
Sbjct: 137 RSLRDDPNYDALISALYPDIDKY 159
>gi|242058973|ref|XP_002458632.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
gi|241930607|gb|EES03752.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
Length = 472
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+RSLR DP
Sbjct: 99 IRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDP 158
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
+D LI+ +YP D+YE ++ E+ + + + ++I E + QS+
Sbjct: 159 KYDALIAALYPDIDKYEEEELAFNEQERIRNQK--IQETIEETFRRQSE 205
>gi|449463098|ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 495
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 96 IFVELSGIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP D+Y
Sbjct: 156 RSLRDDPNYDALIAALYPDIDKY 178
>gi|356542973|ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 433
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 55 IRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 114
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEK 126
N+D LI+ +YP+ ++YE +++ E+
Sbjct: 115 NYDALIAALYPNIEKYEIEELQFCEE 140
>gi|326490487|dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 55/83 (66%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 109 ILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSR 168
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPNFD LI +YP D+Y
Sbjct: 169 RSLRDDPNFDALILALYPDIDKY 191
>gi|10176883|dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
Length = 486
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 22 RTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
R+P D +E + + + ++ CPICL ++KKT T ECLHRFC +CI ++R GN
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 169
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLE 125
ECP CRK S+RSLR DP FD LI+ ++ + D YE ++ E
Sbjct: 170 NECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHE 214
>gi|242088361|ref|XP_002440013.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
gi|241945298|gb|EES18443.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
Length = 449
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+RSLR DP
Sbjct: 115 VRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDP 174
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI +YP D+Y
Sbjct: 175 NYDALILALYPDIDKY 190
>gi|145358843|ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1a; AltName:
Full=Polycomb complex protein RING1a; AltName:
Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
finger protein 434
gi|332007702|gb|AED95085.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 522
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 22 RTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
R+P D +E + + + ++ CPICL ++KKT T ECLHRFC +CI ++R GN
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 169
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECP CRK S+RSLR DP FD LI+ ++ + D YE ++
Sbjct: 170 NECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEEL 210
>gi|226496665|ref|NP_001147987.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
gi|194707960|gb|ACF88064.1| unknown [Zea mays]
gi|195614998|gb|ACG29329.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
Length = 494
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+RSLR DP
Sbjct: 112 VRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDP 171
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI +YP D+Y
Sbjct: 172 NYDALILALYPDIDKY 187
>gi|218197034|gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
Length = 451
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC DCI ++R GN ECP CR S+
Sbjct: 101 ILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASR 160
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI +YP D+Y
Sbjct: 161 RSLRDDPNYDALILALYPDIDKY 183
>gi|297843186|ref|XP_002889474.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335316|gb|EFH65733.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 464
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ V + ++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTCRK S+
Sbjct: 90 LYVDLADIRRDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASR 149
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAHQV--RVLEKLNKSHSQAALVQ 138
RSLR DPNFD LI+ ++ + D++E ++ R +K QA++ Q
Sbjct: 150 RSLRDDPNFDALIATLFENIDQFEEEEMAFRQDDKARNKQIQASIAQ 196
>gi|224133478|ref|XP_002328052.1| predicted protein [Populus trichocarpa]
gi|222837461|gb|EEE75840.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 127 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSLRDDP 186
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI+ +YP D+Y
Sbjct: 187 NYDALIAALYPDIDKY 202
>gi|297791429|ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309434|gb|EFH39858.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 57/85 (67%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CRK S+RSLR DP
Sbjct: 125 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDP 184
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLE 125
FD LI+ ++ + D YE ++ E
Sbjct: 185 KFDALIAALFTNIDSYEEEELAFHE 209
>gi|302143319|emb|CBI21880.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 175 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 234
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI+ +YP D+Y
Sbjct: 235 NYDALIAALYPDIDKY 250
>gi|359485403|ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 412
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ V + ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 12 VFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 71
Query: 94 RSLRADPNFDLLISKIYPSRDEY 116
RSLR DPN+D LI+ +YP D+Y
Sbjct: 72 RSLRDDPNYDALIAALYPDIDKY 94
>gi|440793647|gb|ELR14825.1| E3 ubiquitin-protein ligase RING2, putative [Acanthamoeba
castellanii str. Neff]
Length = 271
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 58 MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYE 117
MT ECLHRFC++CI LR G +ECPTCR S+R LR DP FD LI+ +YP+ DEYE
Sbjct: 1 MTLMECLHRFCAECISKCLRVGKRECPTCRVHCSSRRQLRPDPEFDALIASVYPNLDEYE 60
Query: 118 AHQVRVLEKLNKSHS-QAALVQSINEGIKLQ 147
A + + LNK S Q+ L +S+ +GI Q
Sbjct: 61 AQEEEFIADLNKKMSCQSHLTESVQKGILRQ 91
>gi|145335046|ref|NP_171873.2| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|122230252|sp|Q0WX00.1|RNG1B_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1b; AltName:
Full=Polycomb complex protein RING1b; AltName:
Full=Protein RING1b; Short=AtRING1b; AltName: Full=Ring
finger protein 5
gi|110740485|dbj|BAE98348.1| hypothetical protein [Arabidopsis thaliana]
gi|332189487|gb|AEE27608.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 460
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTCRK S+RSLR DPNFD
Sbjct: 100 DVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFD 159
Query: 104 LLISKIYPSRDEYEAHQV 121
LI+ ++ + D++E ++
Sbjct: 160 ALIAALFKNIDKFEEEEL 177
>gi|334182275|ref|NP_001184901.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189489|gb|AEE27610.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 468
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTCRK S+RSLR DPNFD
Sbjct: 102 DVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFD 161
Query: 104 LLISKIYPSRDEYEAHQV 121
LI+ ++ + D++E ++
Sbjct: 162 ALIAALFKNIDKFEEEEL 179
>gi|334182273|ref|NP_001184900.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189488|gb|AEE27609.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 466
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTCRK S+RSLR DPNFD
Sbjct: 100 DVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFD 159
Query: 104 LLISKIYPSRDEYEAHQV 121
LI+ ++ + D++E ++
Sbjct: 160 ALIAALFKNIDKFEEEEL 177
>gi|356515162|ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 455
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 77 IRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 136
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI+ +YP+ ++Y
Sbjct: 137 NYDALIAALYPNIEKY 152
>gi|356542160|ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 500
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 116 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 175
Query: 101 NFDLLISKIYPSRDEY 116
N+D LI+ +YP ++Y
Sbjct: 176 NYDALIAALYPDIEKY 191
>gi|168065332|ref|XP_001784607.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663839|gb|EDQ50582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DPNFD
Sbjct: 1 MQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDA 60
Query: 105 LISKIYPSRDEYEAHQVRVLE 125
L++ IYP DEYE ++ E
Sbjct: 61 LVAAIYPDLDEYEEEELAFFE 81
>gi|397611881|gb|EJK61509.1| hypothetical protein THAOC_17988 [Thalassiosira oceanica]
Length = 581
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 15 LSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
L++YE+ R P+ +T I + +++ CPICL +K T ECLHRFC DCI
Sbjct: 30 LTLYEIYREPRRGDPSST-IRLDINDINAAFQCPICLGYIKNCRTVMECLHRFCEDCIEK 88
Query: 75 ALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
+R G KECP CRK + S+RSLR D +FD L+ I+ DE E +Q EK+ K++ Q
Sbjct: 89 YIRLGKKECPQCRKPVPSRRSLRTDKSFDALMRSIHGDVDEIEKYQE---EKIVKANMQ 144
>gi|356546993|ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 501
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 119 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 178
Query: 101 NFDLLISKIYP 111
N+D LIS +YP
Sbjct: 179 NYDALISALYP 189
>gi|167521153|ref|XP_001744915.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776529|gb|EDQ90148.1| predicted protein [Monosiga brevicollis MX1]
Length = 91
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLI 106
C +CL++L+ TMT KECLHRFC+DCI +LR G KECPTCR S+RSLR D D +I
Sbjct: 1 CAVCLNLLENTMTMKECLHRFCNDCIEKSLRLGRKECPTCRTSCPSRRSLRHDARIDGII 60
Query: 107 SKIYPSRDEYEAHQVRVLEKLNKSHSQAAL 136
+YP R EYE Q +V L S + + L
Sbjct: 61 HALYPDRQEYERMQDQVCSSLRYSRTSSTL 90
>gi|1177330|emb|CAA64746.1| Ring1 [Rattus norvegicus]
Length = 49
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 45/48 (93%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR 77
D TEIAVSPRSLHSELMCPICLDMLK TMTTKEC HRFCSDCI+TALR
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECCHRFCSDCIVTALR 49
>gi|320162947|gb|EFW39846.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 309
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 39/271 (14%)
Query: 12 SWELSMYELNRT-PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSD 70
S L YE R+ P I DN + P + + L CP+CL +++ ECLHRFC +
Sbjct: 22 SMRLDAYEEQRSVPIPTIADNRRATI-PLTF-APLQCPVCLCLIQNAHGNIECLHRFCEE 79
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRV-LEKLNK 129
CI +A+R G K+CP+CR L ++RSLR D N D L++ +Y +++E Q E++ +
Sbjct: 80 CITSAVRMGPKQCPSCRGSLPTRRSLRHDSNLDQLVAAMYGDHEQFEKQQNEYSAEQIRR 139
Query: 130 SHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSN 189
+Q + +KL +R K+ +G+ +++ + + +S +Q P+P PT
Sbjct: 140 KQAQTLV-------LKLP-----RREKRVARGDRQSS---AASSASSPRQCPTPTPTA-- 182
Query: 190 AIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSETDD------- 242
Q+ +VP+ P + PSS S+ S+ KS + D +S +D
Sbjct: 183 ---QQIPRSVPR-PLSLPSSHQPSAGVAGSRAQTKSAAGSE----DGSSPSDPNALPGSL 234
Query: 243 ---KISTVESATDGEVDHLTKYLTMRLRLEG 270
+ +V + +V+H+ +L + R G
Sbjct: 235 PILAMDSVTTPGTCQVNHILAWLDLIARTNG 265
>gi|349603620|gb|AEP99411.1| E3 ubiquitin-protein ligase RING2-like protein, partial [Equus
caballus]
Length = 219
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 31/224 (13%)
Query: 114 DEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDI 169
DE EAHQ RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N D
Sbjct: 1 DEMEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN-GDS 59
Query: 170 SNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT 229
S+ S P+ N+ + S ++ A+ + V ++ +++
Sbjct: 60 SHCSNASTHSNQEAGPS------NKRTKTSDDSGLELDNNNATVAIDPVMDGASEIELVF 113
Query: 230 ----SELETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE-----GSD-------I 273
+ +E DD+++T ++++ + VDHL+KYL +RL LE G
Sbjct: 114 RPHPTLMEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTA 169
Query: 274 CDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+ + IY++ + F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 170 SEKQYTIYIATAQGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 213
>gi|428167576|gb|EKX36533.1| hypothetical protein GUITHDRAFT_43965, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 53/81 (65%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLI 106
CPICL +++ T T ECLHRFC +CI LR G KECP CR K+ S+R+LRADP FD LI
Sbjct: 1 CPICLSIVRSTHTFMECLHRFCQECIEKYLRLGQKECPKCRVKVSSRRALRADPQFDKLI 60
Query: 107 SKIYPSRDEYEAHQVRVLEKL 127
YP D YE + + K+
Sbjct: 61 QAFYPDIDAYEEKEEEFISKV 81
>gi|147774461|emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]
Length = 636
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 28/128 (21%)
Query: 18 YELNRTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLK--------------------- 55
YE +R+P + + E + V + E+ CPICL L+
Sbjct: 225 YESDRSPSWSNGEKDEFVIVKLAEIRKEVQCPICLGHLQETARCMIAHHLKEFVXAYDIA 284
Query: 56 ------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D LI+ +
Sbjct: 285 CMGSSGKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAL 344
Query: 110 YPSRDEYE 117
YP D+YE
Sbjct: 345 YPDIDKYE 352
>gi|302754330|ref|XP_002960589.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
gi|300171528|gb|EFJ38128.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
Length = 77
Score = 94.7 bits (234), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++KT T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 1 ITVYLSEIRKEMQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 60
Query: 94 RSLRADPNFDLLISKIY 110
RSLR DPNFD LI+ +Y
Sbjct: 61 RSLRDDPNFDSLIAALY 77
>gi|403223591|dbj|BAM41721.1| uncharacterized protein TOT_040000102 [Theileria orientalis strain
Shintoku]
Length = 298
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 26/186 (13%)
Query: 5 EQSGTTKSWELSMYELNRTPQ---EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
E +G+ ++ L++YE+ R P+ +A ++ + ++ L E+ CPIC ++ + + K
Sbjct: 14 ELNGSL-TYGLTLYEVLRAPRIPNQAKYEDIDATLNGSGLREEISCPICSGIVLRCVVIK 72
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
CLHRFC +CI +R G ECP CRK + SKR L+ADP +D +IS+I V
Sbjct: 73 TCLHRFCLNCIQKCVRIGLHECPKCRKHVPSKRFLKADPIYDSIISRI--------VTNV 124
Query: 122 RVLEKLNKSHSQAALVQSINEGIK-------LQSQHRLQRTKKNIQGNEENTPDISNTDQ 174
+ EKL+ + + A IN+GIK ++ + + K NI+ E +P++ + D+
Sbjct: 125 EIFEKLSDAFTVA-----INKGIKNDPNIEMIRRNYLDKNPKVNIKDVE--SPNVLSLDE 177
Query: 175 TSVQQQ 180
+Q +
Sbjct: 178 FWIQNK 183
>gi|4204310|gb|AAD10691.1| Hypothetical protein [Arabidopsis thaliana]
Length = 439
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 8/101 (7%)
Query: 46 MCPICLD------MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
+ IC D +++KT T ECLHRFC +CI ++R GN ECPTCRK S+RSLR D
Sbjct: 96 LADICKDVQCSIWIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDD 155
Query: 100 PNFDLLISKIYPSRDEYEAHQV--RVLEKLNKSHSQAALVQ 138
PNFD LI+ ++ + D++E ++ R ++ QA++ Q
Sbjct: 156 PNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQ 196
>gi|357500025|ref|XP_003620301.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355495316|gb|AES76519.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 198
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+++ ++H E+ CPIC +L+KT T ++CLHRFC +CI +RSG ECP CR ++
Sbjct: 27 VSIDLSNIH-EIECPICFGILRKTKTIRKCLHRFCGECIEKCMRSGKNECPICRTHCPTQ 85
Query: 94 RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
SLR DPN+D LI+ ++P D++E ++ +L++
Sbjct: 86 LSLRDDPNYDALIALLHPDIDKFEKEELALLKE 118
>gi|413934828|gb|AFW69379.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
+++KT T ECLHRFC DCI ++R GN ECP CR S+RSLR DPN+D LI+ +YP
Sbjct: 123 IIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPD 182
Query: 113 RDEYEAHQVRVLEK 126
D+YE + E+
Sbjct: 183 IDKYEEEEFAFSEQ 196
>gi|111183164|gb|ABH07901.1| putative zinc finger protein [Solanum lycopersicum]
Length = 433
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
+++KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D LI+ +YP
Sbjct: 43 IIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSLRDDPNYDALIAFLYPD 102
Query: 113 RDEYEAHQV------RVLEK-LNKSHSQAALVQSINEGIKL-----------QSQHRLQR 154
D++E + + L K + S +Q + QS G K Q +R R
Sbjct: 103 IDKFEEEEFAFHEEDKALNKQIQASIAQTSQRQSEALGRKRSARAAAFTRRSQGNYRNLR 162
Query: 155 TKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSS 214
++N QG E + D V + S S +K P K RPS A+++S
Sbjct: 163 GRRNYQGAEHHISDEEEDGNHDVGKDSSSADERSIEVK----PKRQKKRAGRPSQASAAS 218
>gi|357475901|ref|XP_003608236.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|87240735|gb|ABD32593.1| Zinc finger, RING-type [Medicago truncatula]
gi|355509291|gb|AES90433.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 252
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%)
Query: 29 TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
T+ E A S E+ CPIC +++KT T +ECLHRFC +CI +R G ECP CR
Sbjct: 80 TEKEEYASIDLSSMYEIECPICFGIIRKTKTIRECLHRFCEECINKCMRFGKNECPVCRT 139
Query: 89 KLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL 124
+ SLR DPN+D LI+ + P D++E ++ +L
Sbjct: 140 HCPDQLSLRDDPNYDALIALLCPDIDKFEKEELTLL 175
>gi|255536761|ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
gi|223549346|gb|EEF50834.1| ring finger protein, putative [Ricinus communis]
Length = 418
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 42 HSELMCPICLD-------MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
H E P+ D +++KT T ECLHRFC +CI ++R GN ECP CR S+R
Sbjct: 28 HHEQQLPLVGDGRAAADGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 87
Query: 95 SLRADPNFDLLISKIYPSRDEY 116
SLR DPN+D LI+ +YP D+Y
Sbjct: 88 SLRDDPNYDALIAALYPDIDKY 109
>gi|401409546|ref|XP_003884221.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
gi|325118639|emb|CBZ54190.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
Length = 1330
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 15 LSMYELNRTPQEAITD---NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDC 71
+S+YE P+ I D + + ++ L +L CPIC+ + + + K+CLHRFC+DC
Sbjct: 677 ISVYEATAEPRR-IADARLSRQTSLGESELRCDLSCPICMGIFQNVVVVKDCLHRFCADC 735
Query: 72 IITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL 124
I +R+G +ECP CR + S+R+LR DP F+ +++K++P +EA ++
Sbjct: 736 IEKCVRTGLRECPQCRIHVASRRALRPDPTFERILNKLFPDVRAFEAKNTELI 788
>gi|168046374|ref|XP_001775649.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673067|gb|EDQ59596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 812
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%)
Query: 50 CLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
C +++KT T ECLHRFC +CI ++R GN ECP CR S+RSLR DPNFD L++ I
Sbjct: 229 CEGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALVAAI 288
Query: 110 YPSRDEYEAHQVRVLE 125
YP DEYE ++ E
Sbjct: 289 YPDLDEYEEEELAFFE 304
>gi|308512783|gb|ADO33045.1| ring finger protein [Biston betularia]
Length = 119
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGN 295
D + +++ + VDHL+KYL MRL L+ +++ D+ NF IYV+P+ + F+ L G
Sbjct: 34 DSSVRYLKTTANASVDHLSKYLAMRLTLDLDAELPDAYRMLNFCIYVAPAPSQFVPLAGT 93
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+LRQI+DK+WK KPLE+YYSWKK
Sbjct: 94 QTLRQINDKFWKVNKPLEMYYSWKK 118
>gi|84997477|ref|XP_953460.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304456|emb|CAI76835.1| hypothetical protein, conserved [Theileria annulata]
Length = 286
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 13 WELSMYELNRTPQEAIT---DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+ L+ +E+ RTP+ T D E ++ L EL C IC ++ K + K CLHRFCS
Sbjct: 21 FGLTPFEVLRTPRTVDTEKFDRLETTLNDSGLREELTCAICSGIISKCVVIKTCLHRFCS 80
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+CI +R G + CP CRK + S+R R DP +D LIS+I V V E+L+
Sbjct: 81 NCIEKCVRVGTRGCPKCRKHVPSRRFFRNDPIYDSLISRI--------ISNVEVFEELSD 132
Query: 130 SHSQAALVQSINEGIK 145
+ + A IN+G+K
Sbjct: 133 TFTMA-----INKGMK 143
>gi|429329911|gb|AFZ81670.1| hypothetical protein BEWA_010870 [Babesia equi]
Length = 301
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 16/145 (11%)
Query: 15 LSMYELNRTPQEAI---TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDC 71
L+++E+ R P+ A N + +++ L E+ C IC ++ K + K CLHRFCS C
Sbjct: 23 LTVFEVVRNPRMADKFEYQNLQTSLNESGLRDEISCAICSGIVHKCVVIKTCLHRFCSSC 82
Query: 72 IITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSH 131
I +R G +ECP CRK + S+R L+ DP +D +IS++ P+ V+V E+L+ +
Sbjct: 83 IEKCVRIGLRECPKCRKHVPSRRFLKPDPIYDSIISRLIPN--------VKVFEELSDT- 133
Query: 132 SQAALVQSINEGIKLQSQHRLQRTK 156
++ +IN+G+K S R+K
Sbjct: 134 ----IIMAINKGMKNDSTIEAIRSK 154
>gi|449531613|ref|XP_004172780.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 424
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D LI+ +YP
Sbjct: 44 IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPD 103
Query: 113 RDEY 116
D+Y
Sbjct: 104 IDKY 107
>gi|66359826|ref|XP_627091.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
gi|46228519|gb|EAK89389.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
Length = 302
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 15 LSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
L+ YEL+ + ++T + L+S+ C IC +L++TM K+CLHRFC +CI
Sbjct: 52 LNKYELSESILSSVT-----TLGENDLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEK 106
Query: 75 ALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL 124
+R G +ECP CR + S+RSLR D D L +++P E+E +L
Sbjct: 107 CVRIGLRECPQCRLHIASRRSLRNDSIMDTLTLRLFPEASEFERRHQEIL 156
>gi|209876968|ref|XP_002139926.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209555532|gb|EEA05577.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 304
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L+S+ C IC +L++TM K+CLHRFC+ CI +R G +ECP CR + S+RSLR+D
Sbjct: 74 LYSDFNCSICFKILRRTMVVKDCLHRFCNSCIEKCVRIGLRECPQCRLHIASRRSLRSDS 133
Query: 101 NFDLLISKIYPSRDEYEA-HQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
D + S+++P E+E H+ V+E N+ S+A + IK +S++ R+ N
Sbjct: 134 IMDTVASRLFPKVAEFEKQHEEMVIEN-NRRLSEARM------SIKNESKYISNRSSNN 185
>gi|77551611|gb|ABA94408.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 893
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I V + E+ CPICL +++K ECLHRFC DCI ++ GN ECP CR L S
Sbjct: 86 ILVKLMDIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMWLGNDECPACR-TLASS 144
Query: 94 RSLRADPNFDLLISKIYP 111
SL+ DPNFD LI +YP
Sbjct: 145 HSLKVDPNFDALILTLYP 162
>gi|414880137|tpg|DAA57268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFC DCI ++R GN ECP+CR S+RSLR DPN+D LI+ +YP D+YE ++
Sbjct: 2 ECLHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEEL 61
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQ 149
E+ + + + ++I E + QSQ
Sbjct: 62 AFNEQEMTRNQK--IQETIEETFRRQSQ 87
>gi|222616200|gb|EEE52332.1| hypothetical protein OsJ_34363 [Oryza sativa Japonica Group]
Length = 490
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICL +++K ECLHRFC DCI ++R GN ECP CR S SL+ DP
Sbjct: 3 IRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVDP 61
Query: 101 NFDLLISKIYP 111
NFD LI +YP
Sbjct: 62 NFDALILTLYP 72
>gi|91095245|ref|XP_970564.1| PREDICTED: similar to ring finger protein 1 [Tribolium castaneum]
gi|270017230|gb|EFA13676.1| hypothetical protein TcasGA2_TC001392 [Tribolium castaneum]
Length = 369
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 241 DDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDS-----NFGIYVSPSSNNFILLPGN 295
++ I +++ + VDHL KYL MRL L+ + NF IY+SP++ ++ L GN
Sbjct: 284 ENSIRYIKTTANATVDHLHKYLAMRLTLDLDSQLPTTHSLLNFCIYISPTAGQYVQLNGN 343
Query: 296 QSLRQIHDKYWKSEKPLEVYYSWKK 320
Q+L Q++DKYWK KPLE+YYSWKK
Sbjct: 344 QTLGQVNDKYWKVNKPLEMYYSWKK 368
>gi|237834067|ref|XP_002366331.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963995|gb|EEA99190.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 1440
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 15 LSMYELNRTPQEAITD--NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI 72
+S+YE P+ + + + L +L CPIC+ + + + K+CLHRFC+DCI
Sbjct: 616 VSVYEATAEPRRIDESLLSKQTTLGESELRCDLSCPICMGIFQNVVVVKDCLHRFCADCI 675
Query: 73 ITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVL 124
+R+G +ECP CR + S+R+LR DP F+ +++K++P +EA ++
Sbjct: 676 EKCVRTGLRECPQCRIHVASRRALRPDPIFERILNKLFPDVSAFEAKNAELI 727
>gi|71029646|ref|XP_764466.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351420|gb|EAN32183.1| hypothetical protein TP04_0829 [Theileria parva]
Length = 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 18/137 (13%)
Query: 13 WELSMYELNRTPQ----EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
+ L+ +E+ R P+ E+ ++ E ++ L EL C IC ++ K + K CLHRFC
Sbjct: 21 FGLTPFEVLRRPRTIDFESF-EHFETTLNNSGLREELTCAICSGIISKCVVIKTCLHRFC 79
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
S+CI +R G + CP CRK + S+R R DP +D LIS+I V V E+L+
Sbjct: 80 SNCIEKCVRVGTRGCPKCRKHVPSRRFFRTDPIYDSLISRI--------ITNVEVFEELS 131
Query: 129 KSHSQAALVQSINEGIK 145
+ + A IN+G+K
Sbjct: 132 DTFTMA-----INKGMK 143
>gi|7507801|pir||T16870 hypothetical protein T13H2.3 - Caenorhabditis elegans
Length = 2447
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITA-LRSGNKECPTCRKKLVSKRSLRADPNFDLL 105
C +C ++++ ++ TK+C HRFC CI+ A +RSGN CPTCR+ L SKR L+ DP FD L
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNT-CPTCRQNLGSKRELQQDPRFDQL 220
Query: 106 ISKIYPSR 113
I ++ SR
Sbjct: 221 IYQVVESR 228
>gi|392925881|ref|NP_001024904.2| Protein SPAT-3, isoform a [Caenorhabditis elegans]
gi|351049594|emb|CCD63270.1| Protein SPAT-3, isoform a [Caenorhabditis elegans]
Length = 2476
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITA-LRSGNKECPTCRKKLVSKRSLRADPNFDLL 105
C +C ++++ ++ TK+C HRFC CI+ A +RSGN CPTCR+ L SKR L+ DP FD L
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNT-CPTCRQNLGSKRELQQDPRFDQL 220
Query: 106 ISKIYPSR 113
I ++ SR
Sbjct: 221 IYQVVESR 228
>gi|323454311|gb|EGB10181.1| hypothetical protein AURANDRAFT_9162, partial [Aureococcus
anophagefferens]
Length = 58
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 42/58 (72%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIY 110
+L KT ECLHRFCS+CI LR G ECP+CR + S+RSLR DPNFD LISKIY
Sbjct: 1 ILHKTKIVMECLHRFCSECIQKCLRVGKNECPSCRIHVPSRRSLRPDPNFDALISKIY 58
>gi|402593332|gb|EJW87259.1| hypothetical protein WUBG_01829 [Wuchereria bancrofti]
Length = 544
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 1 MTSTEQSGTTKSWELSM-----YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK 55
M S G+ S L++ Y+ +R P + A+ + EL C IC ++
Sbjct: 1 MVSGRSDGSPASRRLTLPQSTLYDKSRKPHTLRSGVDTKAIHFDWISKELECGICEKTIQ 60
Query: 56 KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDE 115
TM + C+HRFC+DCI+ + +G ++CP+C K L K L++D NFD +I+K++
Sbjct: 61 NTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTPLKSDANFDAIINKMWC---L 117
Query: 116 YEAHQVRVL 124
Y+A +++L
Sbjct: 118 YQAVHIKLL 126
>gi|341874458|gb|EGT30393.1| hypothetical protein CAEBREN_21765 [Caenorhabditis brenneri]
Length = 2806
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCI-ITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
L C +C ++++ ++ TK+C HRFC CI IT LR+GN CP CR+ L SKR L+ DP FD
Sbjct: 207 LSCDVCQEVIQMSVVTKKCGHRFCDQCILITLLRAGNT-CPACRQNLASKRELQQDPRFD 265
Query: 104 LLISKIYPSR 113
LI ++ SR
Sbjct: 266 QLIHQMVESR 275
>gi|308512539|ref|XP_003118452.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
gi|308239098|gb|EFO83050.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
Length = 2826
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITA-LRSGNKECPTCRKKLVSKRSLRADPNFDLL 105
C +C +++++++ TK+C HRFC CII A +RSGN CPTCR+ L SKR L+ DP FD
Sbjct: 166 CHVCQEVIQQSIVTKKCGHRFCDQCIIVAFIRSGNT-CPTCRQNLGSKRELQQDPRFDQF 224
Query: 106 ISKIYPSR 113
I + SR
Sbjct: 225 ILQFLESR 232
>gi|399218630|emb|CCF75517.1| unnamed protein product [Babesia microti strain RI]
Length = 310
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 13 WELSMYELNRTPQEAITDN---TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCS 69
+L + EL R P+ ++ + E + L L C IC +++ + K CLHRFCS
Sbjct: 20 LDLRIDELIRVPRRNLSSSELENETTLGQSGLRDHLCCVICSGIIQNCVVIKTCLHRFCS 79
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
CI RSG +ECP CRK + SKR L D FD +I+ ++P+
Sbjct: 80 TCIEKCFRSGIRECPQCRKHVPSKRFLHHDAIFDSIITTLFPN 122
>gi|357472141|ref|XP_003606355.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355507410|gb|AES88552.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 91
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
+++KT T+ EC+HRFC CI +R G ECPTCR S+R+LR DPN+D LI+ IYP+
Sbjct: 6 IIRKTRTSMECMHRFCKVCIDKCMRRGTNECPTCRTHFPSRRALRDDPNYDALIAAIYPN 65
Query: 113 RDE 115
D+
Sbjct: 66 IDK 68
>gi|412992642|emb|CCO18622.1| predicted protein [Bathycoccus prasinos]
Length = 666
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 29/190 (15%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
R + ++ C IC +K +T + CLHRFC+DC+ ++R CP CR K+ S+R
Sbjct: 87 RDVRADTRCSICWGTVKNCVTVRVCLHRFCNDCVQESIRKNQMCCPECRAKVASRRDFVK 146
Query: 99 DPNFDLLISKIYPSR------DEYEAHQVR-----VLE-KLNKSHSQAALVQSINEGIKL 146
DP FD ++S IY ++ DE E R +LE L K + +I E IK
Sbjct: 147 DPKFDAIVSAIYAAKGGAESYDEKEERFSRKEATTILEDNLEKQREERNRYDAIAEQIKK 206
Query: 147 QSQHRLQ--------RTKKNIQGNE-----ENTPDISNTDQTS----VQQQPSPQPTTSN 189
+ Q R + R +K I+ E E + DQ +QQQ
Sbjct: 207 EQQERKEQRLERERLRAQKEIEQRERMAAVERDMRMQQQDQLQRHIMMQQQQRALAGGGV 266
Query: 190 AIKNQLSPAV 199
A +QL +V
Sbjct: 267 ATDHQLEKSV 276
>gi|255078100|ref|XP_002502630.1| predicted protein [Micromonas sp. RCC299]
gi|226517895|gb|ACO63888.1| predicted protein [Micromonas sp. RCC299]
Length = 364
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
S+ ++ C IC LKK CLHRFC CI LR N CPTCR + S+R+LR D
Sbjct: 7 SVRADTRCAICWGTLKKVKVVSPCLHRFCQGCIEEHLRKLNHHCPTCRLHVPSRRALRDD 66
Query: 100 PNFDLLISKIYPSRDEYE 117
P FD ++ +Y + +Y+
Sbjct: 67 PGFDAIVHALYANVPDYD 84
>gi|428181687|gb|EKX50550.1| hypothetical protein GUITHDRAFT_66750, partial [Guillardia theta
CCMP2712]
Length = 117
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 22 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
R +EA+ N + + + + S+ C IC++++ +T +CLHRFC+DCI LR +
Sbjct: 3 RPVREAVP-NATVRIPRKVIDSDFTCAICMNIISETTIITDCLHRFCADCITQCLRHSKR 61
Query: 82 ECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECP+CR + S+R L D +FD +I K+Y RD E ++
Sbjct: 62 ECPSCRTPVASQRKLVRDADFDTMICKMY--RDVSELREI 99
>gi|302854907|ref|XP_002958957.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
gi|300255703|gb|EFJ39992.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
Length = 663
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS---GNKECPTCRKKLVS 92
++PR L + + +C +LK+T+T+ CLHRFC+ CI L +K+CP CR L S
Sbjct: 166 LAPR-LAGKTVVLVCCGILKETVTSTVCLHRFCAACIDKCLAGRPPQHKDCPVCRANLHS 224
Query: 93 KRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAA 135
+RSLR DPNFD L+ +Y Y + ++ N++ +QAA
Sbjct: 225 RRSLRPDPNFDRLLRALYGDVVVYGQQEDSLVAAHNRAVAQAA 267
>gi|146162240|ref|XP_001009052.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila]
gi|146146486|gb|EAR88807.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila
SB210]
Length = 447
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 30 DNTEIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCR 87
D+ I + P + L+ L CPICLD+ ++ + K C HRFC +CI A+RS K+CPTCR
Sbjct: 32 DDQLIDMDPLKKLNYMLTCPICLDIFQEPVYVKGCSHRFCKECIEKAIRSSKMKQCPTCR 91
Query: 88 KKLVSKRSLRADPNFDLLISKIY 110
+ + +KR LR D N +I+ IY
Sbjct: 92 RIIGTKRLLRVDFNVQEIINLIY 114
>gi|268579167|ref|XP_002644566.1| C. briggsae CBR-SPAT-3 protein [Caenorhabditis briggsae]
Length = 2691
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCI-ITALRSGNKECPTCRKKLVSKRSLRADPNFDLL 105
C +C ++++ ++ K+C HRFC CI ++ +RSGN CPTCR+ L SKR L+ DP FD L
Sbjct: 284 CDVCQEVIQHSIVNKKCGHRFCDQCILVSIMRSGNT-CPTCRQNLGSKRELQQDPRFDQL 342
Query: 106 ISKIYPSR 113
I ++ SR
Sbjct: 343 IDQVIESR 350
>gi|393908615|gb|EJD75133.1| hypothetical protein LOAG_17668 [Loa loa]
Length = 536
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MTSTEQSGTTKSWELSM-----YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK 55
M S G S L++ Y+ +R P + +V + EL C IC ++
Sbjct: 1 MVSGRSDGPPASRRLTLPQSTSYDKSRKPHTLRSGVDAKSVHFDWISKELECGICEKTIQ 60
Query: 56 KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
TM + C+HRFC+DCI+ + +G ++CP+C K L K L++D NFD +I+K
Sbjct: 61 NTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTPLKSDANFDAIINKF 114
>gi|145552431|ref|XP_001461891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429728|emb|CAK94518.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSKRSLRAD 99
+ L CPICL + K+ + K+C HRFC +CI ++RS K CPTCRKK+ ++R LR D
Sbjct: 49 IQDYLKCPICLSLFKQAVYIKDCSHRFCKECIEKSIRSQREKSCPTCRKKIATRRDLRVD 108
Query: 100 PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
+++ + P ++Y + +++ K+ SQ
Sbjct: 109 EIVSKMLNTVVPDMEQYRIQEDLQIQQEIKNFSQ 142
>gi|2624229|emb|CAA73321.1| RING1B protein [Mus musculus]
Length = 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 131 HSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEENTPDISNTDQTSVQQQPSPQPT 186
++Q AL SI EG+K+Q+ +RLQR KK N G E+N D S+ S P+
Sbjct: 1 NNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNG-DSSHCSNASTHSNQEAGPS 59
Query: 187 TSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMT----SELETDDTSETDD 242
N+ + S ++ A+ + V ++ +++ + +E DD+++T
Sbjct: 60 ------NKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQT-- 111
Query: 243 KISTVESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFI 290
++++ + VDHL+KYL +RL LE G + + IY++ +S F
Sbjct: 112 --RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFT 169
Query: 291 LLPGNQSLRQIHDKYWKSEKPLEVYYS 317
+L G+ SL + +KYWK KP+E+YY+
Sbjct: 170 VLNGSFSLELVSEKYWKVNKPMELYYA 196
>gi|67594414|ref|XP_665797.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656638|gb|EAL35571.1| hypothetical protein Chro.80216, partial [Cryptosporidium hominis]
Length = 132
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 15 LSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
L+ YEL+ + +IT + L+S+ C IC +L++TM K+CLHRFC +CI
Sbjct: 52 LNKYELSESILSSIT-----TLGENDLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEK 106
Query: 75 ALRSGNKECPTCRKKLVSKRSLRAD 99
+R G +ECP CR + S+RSLR D
Sbjct: 107 CVRIGLRECPQCRLHIASRRSLRND 131
>gi|403335250|gb|EJY66800.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 642
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 14 ELSMYELNRTPQEAIT---DNTEIAVSPRSLHSELM-CPICLDMLKKTMTTKECLHRFCS 69
EL+ Y++ P+ DN EI + + E++ CP+CLD+LK + K CLH+FC+
Sbjct: 63 ELNFYQMACGPRRLENEDFDNNEIDLKSFTDIKEILHCPVCLDILKDPLNVKMCLHKFCA 122
Query: 70 DCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
CI R K+CP CRK + S+R LR+D +I + D +
Sbjct: 123 HCIENYNRLIKKQCPQCRKYIGSRRLLRSDYKLAYIIKALITDIDAF 169
>gi|312099279|ref|XP_003149304.1| hypothetical protein LOAG_13753 [Loa loa]
Length = 175
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 1 MTSTEQSGTTKSWELSM-----YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK 55
M S G S L++ Y+ +R P + +V + EL C IC ++
Sbjct: 1 MVSGRSDGPPASRRLTLPQSTSYDKSRKPHTLRSGVDAKSVHFDWISKELECGICEKTIQ 60
Query: 56 KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
TM + C+HRFC+DCI+ + +G ++CP+C K L K L++D NFD +I+K
Sbjct: 61 NTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTPLKSDANFDAIINKF 114
>gi|145478225|ref|XP_001425135.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392203|emb|CAK57737.1| unnamed protein product [Paramecium tetraurelia]
Length = 273
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR-SGNKECPTCRKKLVSKRSLRAD 99
+ EL CPICL + ++ + K+C HRFC +CI ++R K CPTCRKK+ ++R LR D
Sbjct: 49 IFDELQCPICLSLFEQPVYIKDCSHRFCKECIEKSIRFQREKSCPTCRKKIATRRDLRVD 108
Query: 100 PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQ 133
+ +++ + P +Y + ++++ K+ Q
Sbjct: 109 EVVNKILNTVVPDIKQYRMQEELLIQQEIKNFRQ 142
>gi|108864542|gb|ABA94487.2| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 830
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 51 LDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIY 110
L +++K ECLHRFC DCI ++R GN ECP CR S SL+ DPNFD LI +Y
Sbjct: 36 LSIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVDPNFDALILTLY 94
Query: 111 P 111
P
Sbjct: 95 P 95
>gi|255553681|ref|XP_002517881.1| ring finger protein, putative [Ricinus communis]
gi|223542863|gb|EEF44399.1| ring finger protein, putative [Ricinus communis]
Length = 342
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 17/72 (23%)
Query: 62 ECLHRFCSDCIITALRSG-----------------NKECPTCRKKLVSKRSLRADPNFDL 104
ECLHRFC +CI ++R G N ECP CR S+RSLR DPN+D
Sbjct: 2 ECLHRFCRECIDKSMRLGYVRKILSYLSVIMSLLGNNECPACRTHCASRRSLRDDPNYDA 61
Query: 105 LISKIYPSRDEY 116
LI+ +YP D+Y
Sbjct: 62 LIAALYPDIDKY 73
>gi|219112611|ref|XP_002178057.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410942|gb|EEC50871.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
Length = 411
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 11/102 (10%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
EL+++EL+R P+ +T I S ++L++E C ICLD ++ T T ECLHRFC +
Sbjct: 149 ELTLFELHRRPRPLLTGR--IQRSLKALNAEFRCAICLDYIRSTRTVVECLHRFCEGWYL 206
Query: 74 --TALRS----GNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
T L+ P + SKRSL ADP+FD +++ I
Sbjct: 207 PDTVLKDHCVWAGMSAPYA---VPSKRSLAADPDFDRIVNSI 245
>gi|403347191|gb|EJY73013.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L CP+C D+ + + K CLH+FC++CI R KECP CR ++ S+R LR D
Sbjct: 105 LQCPVCFDIYQSPVIVKPCLHKFCNNCIDAYNRKIKKECPGCRHQIGSRRMLRNDYKISN 164
Query: 105 LISKIYPSRDEY 116
+IS + + DE+
Sbjct: 165 IISTLISNIDEF 176
>gi|384246349|gb|EIE19839.1| hypothetical protein COCSUDRAFT_58076 [Coccomyxa subellipsoidea
C-169]
Length = 263
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSKRSLRA 98
SL +E C +CL ++K C+HRFC+DCI LR ++ CP CR ++ S+R +
Sbjct: 7 SLEAETRCSVCLGIVKSCRLVSGCMHRFCADCIEKWLRVASEPSCPQCRVQMQSRRDCKR 66
Query: 99 DPNFDLLISKIYPSRDEYEAH----QVRVLEKLNKS 130
D FD L+ +Y + YEA + VL++ K+
Sbjct: 67 DVRFDRLLKLLYTNLRSYEAQVYDPKAEVLQEARKT 102
>gi|170589401|ref|XP_001899462.1| ring finger protein 2 [Brugia malayi]
gi|158593675|gb|EDP32270.1| ring finger protein 2, putative [Brugia malayi]
Length = 541
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 53 MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPS 112
M+ + + + C+HRFC+DCI+ + +G ++CP+C K L K L++D NFD +I+K++
Sbjct: 39 MVSYSFSFQNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTPLKSDANFDAIINKMWC- 97
Query: 113 RDEYEAHQVRVL 124
Y+A +++L
Sbjct: 98 --LYQAVHIKLL 107
>gi|403340560|gb|EJY69568.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 555
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
CP+C ++ K CLH FC +CI T +R KECP C+K + +KR LR + F+
Sbjct: 80 FQCPLCKEIAADPGVIKHCLHFFCKNCIETCIRQYKKECPMCKKNMGTKRELRRNRAFEN 139
Query: 105 LISKIYPSRDEYEAHQVRVLEKL 127
+I + + Y+ +Q + +++
Sbjct: 140 IIKVLSKDIEIYQDNQSALFKEI 162
>gi|304445756|pdb|3GS2|A Chain A, Ring1b C-Terminal DomainCBX7 CBOX COMPLEX
gi|304445758|pdb|3GS2|C Chain C, Ring1b C-Terminal DomainCBX7 CBOX COMPLEX
gi|304445776|pdb|3IXS|A Chain A, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
gi|304445778|pdb|3IXS|C Chain C, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
gi|304445780|pdb|3IXS|E Chain E, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
gi|304445782|pdb|3IXS|G Chain G, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
gi|304445784|pdb|3IXS|I Chain I, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
gi|304445786|pdb|3IXS|K Chain K, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex
Length = 111
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 232 LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLEG------------SDICDSNFG 279
+E DD+++T ++++ + VDHL+KYL +RL LE + +
Sbjct: 15 MEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYT 70
Query: 280 IYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 71 IYIATASGQFTVLDGSFSLELVSEKYWKVNKPMELYYA 108
>gi|56693588|gb|AAW22606.1| RNF2 [Bos taurus]
Length = 181
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 16/98 (16%)
Query: 232 LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFG 279
+E DD+++T ++++ + VDHL+KYL +RL LE G + +
Sbjct: 82 MEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYT 137
Query: 280 IYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 138 IYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 175
>gi|241913414|pdb|3H8H|A Chain A, Structure Of The C-Terminal Domain Of Human Rnf2RING1B
Length = 112
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 16/98 (16%)
Query: 232 LETDDTSETDDKISTVESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFG 279
+E DD+++T ++++ + VDHL+KYL +RL LE G + +
Sbjct: 19 MEKDDSAQT----RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYT 74
Query: 280 IYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
IY++ +S F +L G+ SL + +KYWK KP+E+YY+
Sbjct: 75 IYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYA 112
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+CP+C L T ECLH FC CI+ L N +CPTC+ L +K +++
Sbjct: 11 REVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLNK-NAQCPTCKHLLNTAKPNIK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
AD ++ K+ P E + R + H+ +A + E +
Sbjct: 70 ADKALQDIVYKLVPGLYHKEMRKRREFYSKHPEHADSATPEQRGEDV 116
>gi|327275572|ref|XP_003222547.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Anolis carolinensis]
Length = 1360
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR--SGNKECPTCRKK 89
TE+ +L L CPICLD++K+ ++T C H FC C + LR +G +CP C K
Sbjct: 9 TEVRGMLLALQKNLECPICLDVMKEPVSTN-CAHIFCRFCTLKLLRQKTGVTQCPLCNAK 67
Query: 90 LVSKRSLRADPNFDLLISKIY 110
V+KRSLR D F +I +
Sbjct: 68 -VTKRSLREDVRFKQVIKVVL 87
>gi|403368698|gb|EJY84188.1| hypothetical protein OXYTRI_18072 [Oxytricha trifallax]
Length = 528
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGN----KECPTCRKKLVSKRSLRADPNF 102
CPICLD+ + + KEC H+FC +C A + G C CR +++++R LR D
Sbjct: 45 CPICLDIFEMPVKVKECGHQFCREC---AEKYGRLFKPAHCALCRNQIMTRRDLRIDMQL 101
Query: 103 DLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRL--QRTK-KNI 159
LI+K P Y+ + L+ S S L + ++ KL+ + Q+T+ N+
Sbjct: 102 ISLINKFIPDVRAYKTNMCNYLQ----SRSSQQLFEEVSRQDKLKIAEMIMAQKTQNNNV 157
Query: 160 QGNEENTPDISN 171
Q ++ + +++N
Sbjct: 158 QADQSSLKNLNN 169
>gi|40747978|gb|AAR89523.1| breast cancer 1 [Tetraodon nigroviridis]
Length = 1267
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSLRADPN 101
L CPICLD++ + ++TK C H+FC C++ L + CP C+ K ++KRSL+ P
Sbjct: 20 LQCPICLDLMSEPVSTK-CDHQFCRFCMLKLLSNTKQNKANCPVCKSK-ITKRSLQESPG 77
Query: 102 FDLLISKI 109
F L+S +
Sbjct: 78 FQRLVSGL 85
>gi|403374159|gb|EJY87017.1| hypothetical protein OXYTRI_07538 [Oxytricha trifallax]
Length = 531
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGN----KECPTCRKKLVSKRSLRADPNF 102
CPICLD+ + + KEC H+FC +C A + G C CR +++++R LR D
Sbjct: 45 CPICLDIFEMPVKVKECGHQFCREC---AEKYGRLFKPAHCALCRNQIMTRRDLRIDMQL 101
Query: 103 DLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRL--QRTK-KNI 159
LI+K P Y+ + L+ S S L + ++ KL+ + Q+T+ N+
Sbjct: 102 ISLINKFIPDVRAYKTNMCNYLQ----SRSSQQLFEEVSRQDKLKIAEMIMAQKTQNNNV 157
Query: 160 QGNEENTPDISN 171
Q ++ + +++N
Sbjct: 158 QSDQSSLKNLNN 169
>gi|317419423|emb|CBN81460.1| Breast cancer type 1 susceptibility protein homolog [Dicentrarchus
labrax]
Length = 1418
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSLRADPN 101
L CPICLD++ ++TK C H+FC C++ L + CP C+ K ++KRSL+ P
Sbjct: 20 LQCPICLDLMTAPVSTK-CDHQFCKFCMMKLLDNTKQNRANCPVCKAK-ITKRSLQESPG 77
Query: 102 FDLLISKIYPSRDEYE 117
F L++ + YE
Sbjct: 78 FQRLVAGLQDMIQAYE 93
>gi|449019079|dbj|BAM82481.1| probable DNA repair protein RAD5 [Cyanidioschyzon merolae strain
10D]
Length = 1126
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 46 MCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRK 88
+CPICL+ + + + C H FC DCI+T L R GN +CP CRK
Sbjct: 847 LCPICLESIDDAVALRNCAHVFCRDCILTLLLSNRHGNAQCPVCRK 892
>gi|432922349|ref|XP_004080308.1| PREDICTED: uncharacterized protein LOC101160694 [Oryzias latipes]
Length = 1283
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKLVSKRSLRADPN 101
L CPICLD++ ++TK C H+FC C+ L S + CP C+ K +++RSLR P+
Sbjct: 20 LQCPICLDLMAVPVSTK-CDHKFCKFCMTKLLDSSKQNGASCPVCKSK-ITRRSLRESPS 77
Query: 102 FDLLISKIYPSRDEYE 117
F L++ + YE
Sbjct: 78 FQKLVTGLQDIIQAYE 93
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKL-VSKRS 95
R ++ L+CP+C+ L T ECLH FC CI+ L N+E CP+C+ L +K +
Sbjct: 11 REVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAHCPSCKHVLNKAKPN 67
Query: 96 LRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
++AD ++ K+ P E + R K + H+ A + E +
Sbjct: 68 IKADKALQDIVYKLVPGLYHKEMRRRREFYKKHPEHADLATPEQRGEDV 116
>gi|168051407|ref|XP_001778146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670468|gb|EDQ57036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
E+ + L + L CP+C ++ + T ECLH FC DCI L +G E CP C L
Sbjct: 13 EVRIPKAPLLTCLTCPLCNYLIWEATTISECLHTFCKDCIAAELTNGESECCPVCHVGLG 72
Query: 91 -VSKRSLRADPNFDLLISKIYPS 112
+ LRAD + L K++PS
Sbjct: 73 TLPLEKLRADHQLNDLKEKLFPS 95
>gi|307103510|gb|EFN51769.1| hypothetical protein CHLNCDRAFT_139722 [Chlorella variabilis]
Length = 597
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 64 LHRFCSDCIITALRSG-NKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ-- 120
+HRFC DCI LR+ CP CR K SKR + DP FDLL+ ++ +E+E
Sbjct: 1 MHRFCKDCIEAWLRTQIENNCPQCRVKFSSKRDCKPDPVFDLLLGTMFGDVEEFEKQMLD 60
Query: 121 --VRVLEKLNKSHSQAALVQ 138
+ VL++ Q AL +
Sbjct: 61 PSLEVLQQAKAVGQQIALAK 80
>gi|348508869|ref|XP_003441975.1| PREDICTED: hypothetical protein LOC100708332 [Oreochromis
niloticus]
Length = 1366
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSL 96
+L L CPICLD++ ++TK C H+FC C++ L + CP C K V+KRSL
Sbjct: 15 ALWETLQCPICLDLMTAPVSTK-CDHQFCKFCMMKLLDKSKQNKANCPVC-KSTVTKRSL 72
Query: 97 RADPNFDLLISKIYPSRDEYE 117
+ P F L++ + YE
Sbjct: 73 QESPGFQKLVAGLQDMIQAYE 93
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRAD 99
++ L+CP+C L T ECLH FC CI+ L S + CP+C+ L +K +++AD
Sbjct: 13 VNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHL-SKSAHCPSCKHALNKAKPNIKAD 71
Query: 100 PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
++ K+ P E + R K + H+ +A + E +
Sbjct: 72 KALQDIVYKLVPGLYHKEMRKRREFYKKHPEHADSATPEQRGEDV 116
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKL-VSKRS 95
R ++ L+CP+C+ L T ECLH FC CI+ L N+E CP+C+ L +K +
Sbjct: 11 RDVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAYCPSCKHVLNKAKPN 67
Query: 96 LRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
++AD ++ K+ P E + R K + H+ A + E +
Sbjct: 68 IKADKALQDIVYKLVPGLYHKEMRRRREFYKKHPEHADLATPEQRGEDV 116
>gi|255580467|ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223529354|gb|EEF31320.1| brca1 associated ring domain, putative [Ricinus communis]
Length = 987
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ +EL CPICL +L ++ C H FC+ CI+ +++SG+ CP C K +R +RA P
Sbjct: 10 MGTELKCPICLSLLNSAVSLT-CNHIFCNSCIVKSMKSGS-NCPVC-KVPYQRREVRAAP 66
Query: 101 NFDLLISKIYPSRDEYEAHQVRV 123
+ D L++ IY S + Q+ V
Sbjct: 67 HMDNLVN-IYKSMEAASGFQIFV 88
>gi|326432942|gb|EGD78512.1| hypothetical protein PTSG_09210 [Salpingoeca sp. ATCC 50818]
Length = 569
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLR 97
L+ LMC +C L T ECLH FC CI+ S N CP C ++ +LR
Sbjct: 331 LNPYLMCRLCDGYLIDATTLSECLHTFCKSCIVNFFES-NNSCPVCGTLAHEINPHDTLR 389
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLE 125
D ++ K+ P E E H+ RV E
Sbjct: 390 QDRTMQTIVYKLVPGLLEDETHRRRVFE 417
>gi|303289823|ref|XP_003064199.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454515|gb|EEH51821.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
C +C LKK CLHRFC CI +R N CPTCR + S+R LR D
Sbjct: 19 CAVCWGTLKKVKVVSPCLHRFCGACIEEHIRKLNNHCPTCRVPVASRRVLRED 71
>gi|344251973|gb|EGW08077.1| Breast cancer type 1 susceptibility protein-like [Cricetulus
griseus]
Length = 1790
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPISTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ ++ D +E
Sbjct: 80 SQLVEELLKITDAFE 94
>gi|354484980|ref|XP_003504663.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cricetulus griseus]
Length = 1805
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPISTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ ++ D +E
Sbjct: 80 SQLVEELLKITDAFE 94
>gi|410895639|ref|XP_003961307.1| PREDICTED: uncharacterized protein LOC101064828 [Takifugu rubripes]
Length = 1279
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCI---ITALRSGNKECPTCRKKLVSKRSLRADPN 101
L CPICLD+L ++TK C H+FC CI ++ + CP C+ K ++KRSL+ P
Sbjct: 20 LQCPICLDILTAPVSTK-CDHQFCKFCISKLLSNTKQNKANCPVCKSK-ITKRSLQESPG 77
Query: 102 FDLLISKI 109
F L++ +
Sbjct: 78 FQRLVTGL 85
>gi|168036151|ref|XP_001770571.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678092|gb|EDQ64554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
E+ + L + L CP+C ++++ T ECLH FC CI L +G E CP C L
Sbjct: 13 EVRIPKAPLLACLTCPLCNYLIREATTISECLHTFCKACITAELSNGESECCPMCHVGLG 72
Query: 91 -VSKRSLRADPNFDLLISKIYPS 112
+ LRAD + L K++PS
Sbjct: 73 TLPLEKLRADHQLNDLKEKLFPS 95
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+CP+C L T ECLH FC CI+ L + CP+C+ L +K +++
Sbjct: 11 REVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCKHVLNKAKPNIK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
AD ++ K+ P E + R K + H+ A + E +
Sbjct: 70 ADKALQDIVYKLVPGLYHKEMRKRREFYKKHPEHADLATPEQRGEDV 116
>gi|47223969|emb|CAG06146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLR 97
L+ L CP+C L T ECLH FC CI+ L + NK CP C K + S+R
Sbjct: 11 LNPNLTCPLCAGYLIDATTIVECLHSFCKTCIVAFLET-NKFCPRCDVQVHKTCPQLSIR 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSIN 141
AD ++ K+ P + E + R N+ +V++ N
Sbjct: 70 ADKTLQDIVYKLVPGLFKDEMKRRRDFYAENRELEPGEVVETFN 113
>gi|449491308|ref|XP_002195279.2| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Taeniopygia guttata]
Length = 1803
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDC---IITALRSGNKECPTCRKKLVSKRSL 96
++ L CPICLD++++ ++TK C H FC C +I + G ECP C+ + V+KRSL
Sbjct: 17 AMQKNLECPICLDVVQEPVSTK-CDHTFCRFCMFKLINKKKKGVVECPLCKTE-VTKRSL 74
Query: 97 RADPNFDLLISKIYPSRDEYEAH-QVRVLEK--LNKSHSQAALVQSINEGIKLQSQHRLQ 153
+ + F LI + + +E V+ L+ K+ ++A E +QS+
Sbjct: 75 KENSRFKQLIEGLLEAIHAFELDTGVKFLKNHHFPKTSTEATAESLCKESSVIQSKGFRN 134
Query: 154 RTKKNIQGNEE 164
R +K+ +GNE+
Sbjct: 135 R-RKSAKGNEQ 144
>gi|327266530|ref|XP_003218057.1| PREDICTED: tripartite motif-containing protein 39-like [Anolis
carolinensis]
Length = 885
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRK 88
E +P LH EL CPICLD + +T EC H FC C+ + R ++ CP CRK
Sbjct: 21 EAMAAPEDLHDELTCPICLDYFEDPVTLAECGHNFCRSCLTQSHRRRRRKGACPQCRK 78
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 28 ITDNTEIAVS-PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECP 84
I+D+ + A++ + L +EL CPICLD + + EC H FC C+ R CP
Sbjct: 264 ISDSLDEAMAVAQDLCAELTCPICLDYFEDPVILAECGHNFCRFCLTQYCGKRERKAACP 323
Query: 85 TCRK-----KLVSKRSLR 97
CRK L+ R LR
Sbjct: 324 QCRKCFQMESLIPNRQLR 341
>gi|224061053|ref|XP_002300335.1| predicted protein [Populus trichocarpa]
gi|222847593|gb|EEE85140.1| predicted protein [Populus trichocarpa]
Length = 1029
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L T + C H FC+ CI+ +++SG+ +CP C K +R +RA P
Sbjct: 36 MGRELKCPICLSLLD-TAVSLTCNHVFCNSCIVKSMKSGS-DCPVC-KVPYRRREVRAAP 92
Query: 101 NFDLLISKIYPSRDEYEAHQVRV 123
+ D L+S IY S + + V
Sbjct: 93 HMDNLVS-IYKSMEIASGFNIFV 114
>gi|410917430|ref|XP_003972189.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2-like [Takifugu rubripes]
Length = 362
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLR 97
L+ L CP+C L T ECLH FC CI+ L + NK CP C K + S+R
Sbjct: 35 LNPNLTCPLCAGYLIDATTIVECLHSFCKTCIVAFLET-NKFCPRCDVQVHKTCPQLSIR 93
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSIN 141
AD ++ K+ P + E + R N+ +V++ N
Sbjct: 94 ADKTLQDIVYKLVPGLFKDEMKRRRDFYAENRELEPGEVVETFN 137
>gi|297724223|ref|NP_001174475.1| Os05g0497650 [Oryza sativa Japonica Group]
gi|255676466|dbj|BAH93203.1| Os05g0497650 [Oryza sativa Japonica Group]
Length = 514
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 56/267 (20%)
Query: 80 NKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQS 139
N ECP CR S+RSLR DPN+D LI +YP D+YE ++ E+ + + + S
Sbjct: 74 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKK--IQAS 131
Query: 140 INEGIKLQSQHRL--------------QRTKKNIQGNEEN---TPDISNTD-QTSVQQQP 181
I E + QS+ + +RT+ N++ +PDI TD + + +
Sbjct: 132 IAETFRRQSEALVKKRSVAKATGSTITRRTRGNMRAKRRGRTSSPDIVATDNEDEDRDEN 191
Query: 182 SPQPTTSNAIKNQLSP----------AVPKSPEARPSSAASSSTTKVSKKTAKSDVM-TS 230
+ + ++ + SP VP+S A+ SS + + D+M TS
Sbjct: 192 GNEGSKESSSVDDRSPDVRQKRVRRWPVPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTS 251
Query: 231 ELETD-----------DTSETDDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDSNFG 279
L + T + S+ A G V L +Y L +D D+ F
Sbjct: 252 PLRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEY------LRNTDEFDNKFN 305
Query: 280 IYVSPSSNNFILLPGN-QSLRQIHDKY 305
+Y+ +LLP N QS+ ++ Y
Sbjct: 306 LYL-------VLLPLNGQSMPKLEKPY 325
>gi|149054321|gb|EDM06138.1| rCG34321, isoform CRA_b [Rattus norvegicus]
Length = 1550
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSARF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ ++ D +E
Sbjct: 80 SQLVEELLKIIDAFE 94
>gi|238481477|ref|NP_001154760.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|332007703|gb|AED95086.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 525
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 22 RTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLK-------KTMTTKECLH---RFCSD 70
R+P D +E + + + ++ CPICL +K K+C +FC+
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFISYYKENKDCDGMSPQFCAT 169
Query: 71 CIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLE 125
N ECP CRK S+RSLR DP FD LI+ ++ + D YE ++ E
Sbjct: 170 F-------KNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHE 217
>gi|149054320|gb|EDM06137.1| rCG34321, isoform CRA_a [Rattus norvegicus]
Length = 1817
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSARF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ ++ D +E
Sbjct: 80 SQLVEELLKIIDAFE 94
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+CP+C L T ECLH FC CI+ L + CP+C+ L +K +++
Sbjct: 11 REVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCKHVLNKAKPNIK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
AD ++ K+ P E + R K + H+ A + E +
Sbjct: 70 ADKALQDIVYKLVPGLYHKEMRKRREFYKKHPEHADLATPEQRGEDV 116
>gi|115464839|ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group]
gi|113579570|dbj|BAF17933.1| Os05g0512000 [Oryza sativa Japonica Group]
gi|222632199|gb|EEE64331.1| hypothetical protein OsJ_19171 [Oryza sativa Japonica Group]
Length = 987
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L ++ C H FC+DC+ +++S CP C+ +R +R P
Sbjct: 10 MGRELKCPICLSLLSSAVSI-SCNHVFCNDCLTESMKS-TSSCPVCKVPF-RRREMRPAP 66
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQ------SINEGIK-LQSQHRLQ 153
+ D L+S I+ S + V S +A +V+ +N G +SQ L
Sbjct: 67 HMDNLVS-IFKSMEAAAGTNV-------VSTQEAPVVKLADGSDCVNSGKNSKRSQKSLT 118
Query: 154 RTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSP 197
R +K E+NT D T+ QP+ +P+ S + Q+ P
Sbjct: 119 RKRKVTSEMEKNTAK----DATASASQPTTKPSFSTNKRIQVKP 158
>gi|218197089|gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indica Group]
Length = 987
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L ++ C H FC+DC+ +++S CP C+ +R +R P
Sbjct: 10 MGRELKCPICLSLLSSAVSI-SCNHVFCNDCLTESMKS-TSSCPVCKVPF-RRREMRPAP 66
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQ------SINEGIK-LQSQHRLQ 153
+ D L+S I+ S + V S +A +V+ +N G +SQ L
Sbjct: 67 HMDNLVS-IFKSMEAAAGTNV-------VSTQEAPVVRLADGSDCVNSGKNSKRSQKSLT 118
Query: 154 RTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSP 197
R +K E+NT D T+ QP+ +P+ S + Q+ P
Sbjct: 119 RKRKVTSEMEKNTAK----DATASASQPTTKPSFSTNKRIQVKP 158
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+CP+C L T ECLH FC CI+ L + CP+C+ L +K +++
Sbjct: 11 REVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCKHVLNKAKPNIK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
AD ++ K+ P E + R K + H+ A + E +
Sbjct: 70 ADKALQDIVYKLVPGLYHKEMRKRREFYKKHPEHADLATPEQRGEDV 116
>gi|307189309|gb|EFN73740.1| Polycomb group protein Psc [Camponotus floridanus]
Length = 1377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+C +C L T ECLH FC CI+ AL S + +CP+C+ L +K +++
Sbjct: 11 RDINQHLVCLLCRGYLIDATTIVECLHSFCRSCILKAL-STSAQCPSCKHALNKAKPNIK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
AD ++ K+ P E + R K + H+
Sbjct: 70 ADKALQEIVYKLVPGLYHREMLRRREFYKKHPEHA 104
>gi|209881694|ref|XP_002142285.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557891|gb|EEA07936.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 279
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 27 AITDN-TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+TD+ ++A + + L CP+C + T KECLH FC+ CII + SG + CP
Sbjct: 26 VVTDHGLDVAFRIKVIADLLECPLCKGFFRNATTIKECLHTFCNVCIINYIESGKESCPK 85
Query: 86 CRKKLVSK--RSLRADPNFDLLISKIYPSRDEYEAHQVRVLE 125
C + + L D + KI+P Q R+LE
Sbjct: 86 CGEYMGVHPIEGLVFDRTIQNITDKIFP--------QFRILE 119
>gi|428671775|gb|EKX72690.1| hypothetical protein BEWA_012490 [Babesia equi]
Length = 458
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK--RSLRADPNF 102
L C +C + T +EC+H FC C+I + CPTC + + + D N
Sbjct: 189 LSCRLCKGLFYNAHTVRECMHTFCKSCLILSTIECGLMCPTCFTPIPADILEGIEYDHNI 248
Query: 103 DLLISKIYPSRDEYEAHQVRVLEKL 127
L+ KI+P +E E+ Q ++L+++
Sbjct: 249 QGLVDKIFPKFNEIESEQKKILDEI 273
>gi|1699382|gb|AAB37501.1| Brca1 [Rattus norvegicus]
gi|1773281|gb|AAB40387.1| Brca1 gene product [Rattus norvegicus]
Length = 215
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLR 97
++ L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+
Sbjct: 10 AMQKILECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQ 67
Query: 98 ADPNFDLLISKIYPSRDEYE 117
F L+ ++ D +E
Sbjct: 68 GSARFSQLVEELLKIIDAFE 87
>gi|224009894|ref|XP_002293905.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970577|gb|EED88914.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 355
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 36/169 (21%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK--RSLR 97
+L L+C +C + T +CLH FC C+I G CPTC L R +
Sbjct: 105 NLRDHLICSLCKGYFRDPYTVADCLHSFCRSCLIAQFTVGRHRCPTCDISLEPDPFREVL 164
Query: 98 ADPNFDLLISKIYP------SRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHR 151
AD ++ K++P +DE E + R GIKL+ ++
Sbjct: 165 ADRTLQEVVEKVFPWMQTKEEQDEKEFYASR--------------------GIKLKPEYV 204
Query: 152 LQRTK---KNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIKNQLSP 197
++ ++ + G E PD + QT V Q S S+ + QL P
Sbjct: 205 VESSRSPDEKGWGGGEAAPD-GKSSQTVVPTQES----MSDMLDLQLEP 248
>gi|45383782|ref|NP_989500.1| breast cancer 1, early onset [Gallus gallus]
gi|15081211|gb|AAK83825.1|AF355273_1 breast and ovarian cancer susceptibility-like protein [Gallus
gallus]
Length = 1749
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSL 96
++ L CP+CLD++K+ ++TK C H FC C+ L + G +CP C+ + V+KRSL
Sbjct: 17 AMQKNLECPVCLDVIKEPVSTK-CDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKRSL 74
Query: 97 RADPNFDLLISKIYPSRDEYE 117
+ + F LI + + +E
Sbjct: 75 KENSRFKQLIEGLLEAISAFE 95
>gi|383931931|gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
Length = 474
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
VSP +LMCPIC+ M+K T C H FC CIIT LR+ + +CP C + L + +
Sbjct: 2 VSPTETDKDLMCPICMQMIKDAFLTA-CGHSFCYMCIITHLRNKS-DCPCCGRHLTNNQL 59
Query: 96 LRADPNFDL 104
PNF L
Sbjct: 60 Y---PNFLL 65
>gi|325192720|emb|CCA27133.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 239
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 28 ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECP 84
I D +++ + ++ +C +C + T KECLH FC+ CI + R +K CP
Sbjct: 16 IMDGRKVSFRYKDINRHFICTLCNGYFRDAQTIKECLHTFCNGCIRSYFWRNRDAHK-CP 74
Query: 85 TCRKKLVSK--RSLRADPNFDLLISKIYP 111
TC L K L +DP+ LISKI+P
Sbjct: 75 TCSVHLGVKPWTQLISDPSIQGLISKIFP 103
>gi|6978573|ref|NP_036646.1| breast cancer type 1 susceptibility protein homolog [Rattus
norvegicus]
gi|41688427|sp|O54952.1|BRCA1_RAT RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|2695691|gb|AAC36493.1| BRCA1 [Rattus norvegicus]
Length = 1817
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++T +C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVST-QCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSARF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ ++ D +E
Sbjct: 80 SQLVEELLKIIDAFE 94
>gi|302822410|ref|XP_002992863.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
gi|300139311|gb|EFJ06054.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
Length = 554
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKL--VSKRSLRAD 99
L CP+C ++ ++ T ECLH FC DCI R ++E CP C L V LRAD
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHD--RFSDEETNSCPMCNVDLGTVPLEKLRAD 81
Query: 100 PNFDLLISKIY 110
P D + +KI+
Sbjct: 82 PQLDDVQAKIF 92
>gi|345567439|gb|EGX50371.1| hypothetical protein AOL_s00076g135 [Arthrobotrys oligospora ATCC
24927]
Length = 577
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-D 99
L EL C IC ++ K +T CLH FC CI+ R+ N CP+CR ++ R A
Sbjct: 93 LERELTCSICCELFKDPITLLNCLHNFCGSCIVPWGRN-NSSCPSCRAEIKGCRDAFALK 151
Query: 100 PNFDLLI 106
P D+L+
Sbjct: 152 PLIDMLV 158
>gi|301789367|ref|XP_002930103.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Ailuropoda melanoleuca]
Length = 763
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKNN-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|66362364|ref|XP_628146.1| ring domain protein [Cryptosporidium parvum Iowa II]
gi|46227384|gb|EAK88319.1| ring domain protein [Cryptosporidium parvum Iowa II]
Length = 284
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 17 MYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL 76
+YE + + +++ + + L+CPIC + T +ECLH FC CII +
Sbjct: 17 IYEPGDLETKVTENGLDVSFKRKVVSDLLICPICEGFFRGATTIRECLHTFCKACIIEHI 76
Query: 77 RSGNKECPTCRKK--LVSKRSLRADPNFDLLISKIYPS-RDEYEAHQVRVLEK 126
S ECP C + + + L D + KI+P +D+ LEK
Sbjct: 77 ESKGAECPKCGQNIGIYPLQGLVFDRTIQNITDKIFPEFKDKERKLYTEFLEK 129
>gi|410981211|ref|XP_003996966.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Felis catus]
Length = 1873
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C K ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLC-KNDITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|414868841|tpg|DAA47398.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 450
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 31 NTEIAVSPRSLHSE-LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRK 88
++ +A+ R L + L CP+C +L+K T ECLH FC +CI + + + CP C+
Sbjct: 65 DSSVAMVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKI 124
Query: 89 KL----VSKRSLRADPNFDLLISKIYP 111
L V K LRAD N + SK++P
Sbjct: 125 DLGCTPVDK--LRADHNIQDVRSKVFP 149
>gi|212274729|ref|NP_001130541.1| uncharacterized protein LOC100191640 [Zea mays]
gi|194689428|gb|ACF78798.1| unknown [Zea mays]
gi|223949863|gb|ACN29015.1| unknown [Zea mays]
gi|414868842|tpg|DAA47399.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 476
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 31 NTEIAVSPRSLHSE-LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRK 88
++ +A+ R L + L CP+C +L+K T ECLH FC +CI + + + CP C+
Sbjct: 65 DSSVAMVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKI 124
Query: 89 KL----VSKRSLRADPNFDLLISKIYP 111
L V K LRAD N + SK++P
Sbjct: 125 DLGCTPVDK--LRADHNIQDVRSKVFP 149
>gi|390352349|ref|XP_783799.2| PREDICTED: polycomb group RING finger protein 2-like
[Strongylocentrotus purpuratus]
Length = 479
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ L C +C + + ECLH FC CI+ L + +K+CP C ++ R L R
Sbjct: 12 LNKHLTCSLCKGYIVDATSIIECLHSFCRSCIVRYLHT-SKQCPVCDTQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQA--ALVQSIN 141
+D L+ K+ PS + E + R + KSH QA +L Q+++
Sbjct: 71 SDKTLQNLVYKLVPSMFKGEMKRRR---EFYKSHPQASTSLAQTVS 113
>gi|440789950|gb|ELR11241.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 789
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 44 ELMCPICLDMLKK-TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR--SLRADP 100
E +CPIC+ L++ + +C HRFC+DCI + L SG CPTC + S + L + P
Sbjct: 558 EDVCPICVQPLEEDAVVASKCRHRFCADCIASQLASGESRCPTCDVAIDSDKLLPLSSSP 617
Query: 101 NFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
+ + P +E E H +E L K+
Sbjct: 618 KLN---GRERPVAEEAEEHSSAKIEALMKA 644
>gi|125537292|gb|EAY83780.1| hypothetical protein OsI_38996 [Oryza sativa Indica Group]
gi|125579972|gb|EAZ21118.1| hypothetical protein OsJ_36761 [Oryza sativa Japonica Group]
Length = 470
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 32 TEIAVSPRSLHSELM-CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKK 89
+E+ + R L + M CP+C +L+ T ECLH FC CI + E CP C+
Sbjct: 58 SEVVMVKRELLARCMTCPLCRRILRDATTVSECLHTFCRKCIYKKINDEELEHCPVCKID 117
Query: 90 L--VSKRSLRADPNFDLLISKIYP-SRDEYEAHQV 121
L LRAD N + SKI+P R + A +V
Sbjct: 118 LGCAPLEKLRADHNIQDVRSKIFPLKRKKVNAEEV 152
>gi|61740517|ref|NP_001013434.1| breast cancer type 1 susceptibility protein homolog [Canis lupus
familiaris]
gi|2501720|sp|Q95153.1|BRCA1_CANFA RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|1620568|gb|AAC48663.1| similar to the human breast and ovarian cancer susceptibility gene
BRCA1 product [Canis lupus familiaris]
Length = 1878
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|383857689|ref|XP_003704336.1| PREDICTED: uncharacterized protein LOC100877547 [Megachile
rotundata]
Length = 834
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C
Sbjct: 27 KDLNEHIVCPLCRGYLIDATTLMECLHSFCRGCIVRRLSSGARACPVC 74
>gi|302771287|ref|XP_002969062.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
gi|300163567|gb|EFJ30178.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
Length = 394
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKL--VSKRSLRAD 99
L CP+C ++ ++ T ECLH FC DCI R ++E CP C L V LRAD
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHD--RFSDEETNSCPMCNVDLGTVPLEKLRAD 81
Query: 100 PNFDLLISKIY 110
P D + +KI+
Sbjct: 82 PQLDDVQAKIF 92
>gi|390350599|ref|XP_001188292.2| PREDICTED: uncharacterized protein LOC755086 [Strongylocentrotus
purpuratus]
Length = 2640
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
+ L C ICLD+L+ ++TK C H+FC+ C++ L+S +K CP C K +++KRSL
Sbjct: 16 MQKNLECSICLDLLQDPVSTK-CDHQFCNFCVLALLQSSSKPSARCPLC-KIVITKRSLT 73
Query: 98 ADPNFDLLISKI 109
+ D ++ +
Sbjct: 74 KNEQLDGIVKAV 85
>gi|119655545|gb|ABL86143.1| BRCA1 [Strongylocentrotus purpuratus]
Length = 2641
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
+ L C ICLD+L+ ++TK C H+FC+ C++ L+S +K CP C K +++KRSL
Sbjct: 16 MQKNLECSICLDLLQDPVSTK-CDHQFCNFCVLALLQSSSKPSARCPLC-KIVITKRSLT 73
Query: 98 ADPNFDLLISKI 109
+ D ++ +
Sbjct: 74 KNEQLDGIVKAV 85
>gi|67593286|ref|XP_665709.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656518|gb|EAL35482.1| hypothetical protein Chro.10374, partial [Cryptosporidium hominis]
Length = 278
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 28 ITDN-TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+T+N +++ + + L+CPIC + T +ECLH FC CII + S ECP C
Sbjct: 27 VTENGLDVSFKRKVVSDLLICPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKC 86
Query: 87 RKK--LVSKRSLRADPNFDLLISKIYP 111
+ + + L D + KI+P
Sbjct: 87 GQNIGIYPLQGLVFDRTIQNITDKIFP 113
>gi|332019598|gb|EGI60076.1| Polycomb group RING finger protein 2 [Acromyrmex echinatior]
Length = 847
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C
Sbjct: 12 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC 59
>gi|410981213|ref|XP_003996967.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Felis catus]
Length = 765
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|350426395|ref|XP_003494425.1| PREDICTED: hypothetical protein LOC100748744 [Bombus impatiens]
Length = 849
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C + + L
Sbjct: 25 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLP 82
Query: 99 DPNFDLLISKIYPS--RDEYE 117
D L+ + P R E E
Sbjct: 83 DVKLQRLVYLVVPGLFRSELE 103
>gi|348562775|ref|XP_003467184.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cavia porcellus]
Length = 1748
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C K ++KRSL+ F
Sbjct: 21 LECPICLELIKEPVSTK-CDHIFCKFCMLKFLDQKKGLSQCPLC-KSSITKRSLQESTRF 78
Query: 103 DLLISKIYPSRDEYE---AHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
L+ ++ + +E + QV + L+K S + + + E I + + K +
Sbjct: 79 GQLVEELQKTIHAFELDCSSQVENSDSLSKKQSSSP--ERVKEEISIIQSMGYRNRAKRL 136
Query: 160 QGNEENTPDI 169
+ +E +P +
Sbjct: 137 RQSEPGSPAV 146
>gi|340723698|ref|XP_003400226.1| PREDICTED: hypothetical protein LOC100648837 [Bombus terrestris]
Length = 843
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C + + L
Sbjct: 22 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLP 79
Query: 99 DPNFDLLISKIYPS--RDEYE 117
D L+ + P R E E
Sbjct: 80 DVKLQRLVYLVVPGLFRSELE 100
>gi|328777331|ref|XP_003249319.1| PREDICTED: hypothetical protein LOC100576671 [Apis mellifera]
Length = 867
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C
Sbjct: 22 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC 69
>gi|410981215|ref|XP_003996968.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Felis catus]
Length = 698
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|359483657|ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
vinifera]
Length = 1044
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L ++ C H FC+ CI+ +++SG+ CP C K +R +R P
Sbjct: 10 MGRELNCPICLSLLNSAVSLT-CNHVFCNSCIMKSMKSGS-NCPVC-KVPYGRREVRPVP 66
Query: 101 NFDLLISKIYPSRDEYEAHQVRV 123
+ D L+S IY S + V V
Sbjct: 67 HMDSLVS-IYKSMEAASGINVFV 88
>gi|380012177|ref|XP_003690163.1| PREDICTED: uncharacterized protein LOC100863675 [Apis florea]
Length = 846
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C
Sbjct: 12 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC 59
>gi|428175643|gb|EKX44532.1| hypothetical protein GUITHDRAFT_163578 [Guillardia theta
CCMP2712]
Length = 427
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
++I++N E+ + L E CPICLD L T C H FC +CI ++ + ECP+
Sbjct: 2 DSISNNRELRNAVEELIQETKCPICLDFLIDPRTAP-CQHNFCEECICEYIKDNHSECPS 60
Query: 86 CRKKLVSKRSL 96
CR ++R+L
Sbjct: 61 CRTPGTNRRTL 71
>gi|156551976|ref|XP_001602601.1| PREDICTED: hypothetical protein LOC100118694 [Nasonia vitripennis]
Length = 761
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L+ ++CP+C L T ECLH FC CI+ L +G K CP C ++ A
Sbjct: 23 KDLNDHIVCPLCRGYLIDATTLVECLHSFCRGCILRRLHNGPKTCPVCSASALNPPI--A 80
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
D L+ + P E + R ++N
Sbjct: 81 DVGLQRLVYLVVPGLFRSEQERRRHFRQVN 110
>gi|62638180|gb|AAX92675.1| BRCA1-like protein [Monodelphis domestica]
Length = 1844
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++T C H FC C++ L + G +CP C+ ++KRSLR F
Sbjct: 26 LECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNN-ITKRSLRESTRF 83
Query: 103 DLLISKIYPSRDEYE 117
+ L+ + + +E
Sbjct: 84 NQLVEGLLKTIRAFE 98
>gi|402225461|gb|EJU05522.1| hypothetical protein DACRYDRAFT_113608 [Dacryopinax sp. DJM-731
SS1]
Length = 379
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG-NKECPTCR 87
R+L L CPIC D+ + C H FCS CI AL+ G KECP CR
Sbjct: 29 RTLDRTLRCPICKDLFNAPVLLATCGHSFCSLCIREALKEGEKKECPACR 78
>gi|77020291|ref|NP_001029141.1| breast cancer type 1 susceptibility protein [Monodelphis domestica]
Length = 1840
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++T C H FC C++ L + G +CP C+ ++KRSLR F
Sbjct: 22 LECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNN-ITKRSLRESTRF 79
Query: 103 DLLISKIYPSRDEYE 117
+ L+ + + +E
Sbjct: 80 NQLVEGLLKTIRAFE 94
>gi|449434236|ref|XP_004134902.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 1100
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL CPICL +L T++ C H FC+ CI +++SG+ CP C K +R +R P+ D
Sbjct: 13 ELKCPICLSLLNSTVSLG-CNHVFCNVCIEKSMKSGSN-CPVC-KVPYRRREVRPAPHMD 69
Query: 104 LLISKIYPSRDEYEAHQVRVLEKL 127
L+S IY S + + V + L
Sbjct: 70 NLVS-IYKSMEAASGINIFVTQNL 92
>gi|344285134|ref|XP_003414318.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Loxodonta africana]
Length = 1853
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C K ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLC-KNHITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|225433465|ref|XP_002263351.1| PREDICTED: uncharacterized protein LOC100262402 [Vitis vinifera]
gi|298205213|emb|CBI17272.3| unnamed protein product [Vitis vinifera]
Length = 220
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 5 EQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECL 64
+Q+ +L + N+T E + TE+ P CPIC+D L + +TK C
Sbjct: 126 QQNKIDTDLKLCLELFNKTETENVQIPTEV---PSPETPTFTCPICMDQLTEETSTK-CG 181
Query: 65 HRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
H FC +CI A+ + ++ CPTCRKKL K +R
Sbjct: 182 HIFCKECIEGAM-AVSQRCPTCRKKLKKKDIIRV 214
>gi|53370662|gb|AAU89157.1| Zinc finger, C3HC4 type (RING finger) containing protein [Oryza
sativa Japonica Group]
Length = 537
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI L E CP C+ L LRAD N
Sbjct: 108 MTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHN 167
Query: 102 FDLLISKIYP 111
+ SKI+P
Sbjct: 168 LQDVRSKIFP 177
>gi|449490725|ref|XP_004158688.1| PREDICTED: LOW QUALITY PROTEIN: protein BREAST CANCER
SUSCEPTIBILITY 1 homolog [Cucumis sativus]
Length = 1072
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL CPICL +L T++ C H FC+ CI +++SG+ CP C K +R +R P+ D
Sbjct: 13 ELKCPICLSLLNSTVSLG-CNHVFCNVCIEKSMKSGSN-CPVC-KVPYRRREVRPAPHMD 69
Query: 104 LLISKIYPSRDEYEAHQVRVLEKL 127
L+S IY S + + V + L
Sbjct: 70 NLVS-IYKSMEAASGINIFVTQNL 92
>gi|344285136|ref|XP_003414319.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Loxodonta africana]
Length = 761
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C K ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLC-KNHITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|440893907|gb|ELR46515.1| Breast cancer type 1 susceptibility protein-like protein [Bos
grunniens mutus]
Length = 1838
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|395532332|ref|XP_003768224.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Sarcophilus harrisii]
Length = 1757
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++T C H FC C++ L + G +CP C+ V+KRSLR F
Sbjct: 22 LECPICLELIKEPVSTT-CDHIFCKFCMLKLLGKKKGPSQCPLCKNN-VTKRSLRESTRF 79
Query: 103 DLLISKIYPSRDEYE 117
L+ + + +E
Sbjct: 80 KQLVEGLLKTIRAFE 94
>gi|296201526|ref|XP_002748065.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Callithrix jacchus]
Length = 1857
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L ++ C H FC+ CI+ +++SG+ CP C K +R +R P
Sbjct: 464 MGRELNCPICLSLLNSAVSLT-CNHVFCNSCIMKSMKSGSN-CPVC-KVPYGRREVRPVP 520
Query: 101 NFDLLISKIYPSRDEYEAHQVRV 123
+ D L+S IY S + V V
Sbjct: 521 HMDSLVS-IYKSMEAASGINVFV 542
>gi|357115329|ref|XP_003559442.1| PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Brachypodium
distachyon]
Length = 449
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
EI V L L CP+C +L+ EC+H FC +CI+ + E CP C L
Sbjct: 7 EICVRKGLLAGPLTCPLCRGLLRDAHAFTECVHTFCRECIMKKIDDEEIESCPVCNIYLG 66
Query: 91 -VSKRSLRADPNFDLLISKIYP-SRDEYEA 118
+ LR D N L +++P R E++A
Sbjct: 67 IAPEEKLRPDNNIQALRKRLFPLKRAEFDA 96
>gi|296201528|ref|XP_002748066.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Callithrix jacchus]
Length = 1880
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|30466260|ref|NP_848668.1| breast cancer type 1 susceptibility protein homolog [Bos taurus]
gi|55976506|sp|Q864U1.1|BRCA1_BOVIN RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|29640734|gb|AAL76094.1| breast and ovarian cancer susceptibility protein [Bos taurus]
Length = 1849
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|296476316|tpg|DAA18431.1| TPA: breast cancer type 1 susceptibility protein homolog [Bos
taurus]
Length = 1849
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|395749084|ref|XP_003778880.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Pongo abelii]
Length = 1863
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|55250220|gb|AAH85615.1| BRCA1 protein, partial [Homo sapiens]
Length = 624
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|237681119|ref|NP_009231.2| breast cancer type 1 susceptibility protein isoform 2 [Homo
sapiens]
Length = 1884
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|297701026|ref|XP_002827527.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Pongo abelii]
gi|297701028|ref|XP_002827528.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Pongo abelii]
Length = 1884
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|332260951|ref|XP_003279544.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Nomascus leucogenys]
gi|441677725|ref|XP_004092761.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|55976416|sp|Q6J6J0.1|BRCA1_PONPY RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479020|gb|AAT44834.1| breast cancer type 1 [Pongo pygmaeus]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|335297605|ref|XP_003358077.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Sus scrofa]
Length = 1865
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C K ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLC-KNDITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|328721666|ref|XP_001943283.2| PREDICTED: hypothetical protein LOC100162794 [Acyrthosiphon pisum]
Length = 1082
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
++ +L+C +CL L + ECLH FC CI+ L N CP CR+ + + + L+ D
Sbjct: 34 VNRQLICVLCLGYLVDATSIVECLHSFCRSCIVLHLDKNN-FCPICREDIQNSKVLKPDK 92
Query: 101 NFDLLISKIYPS 112
++ K+ P
Sbjct: 93 ALQDIVYKLVPG 104
>gi|53794093|gb|AAU93634.1| breast and ovarian cancer susceptibility protein [Homo sapiens]
Length = 1841
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|332260953|ref|XP_003279545.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Nomascus leucogenys]
gi|441677731|ref|XP_004092762.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1884
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|146741282|dbj|BAF62296.1| breast cancer type 1 susceptibility protein homolog [Sus scrofa]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 20 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 77
Query: 103 DLLISKI 109
L+ ++
Sbjct: 78 SQLVEEL 84
>gi|108709971|gb|ABF97766.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|222625413|gb|EEE59545.1| hypothetical protein OsJ_11819 [Oryza sativa Japonica Group]
Length = 510
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI L E CP C+ L LRAD N
Sbjct: 108 MTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHN 167
Query: 102 FDLLISKIYP-SRDEYEAHQV 121
+ SKI+P R + A +V
Sbjct: 168 LQDVRSKIFPFKRKKISADEV 188
>gi|75875129|gb|ABA29229.1| breast cancer 1 early onset [Homo sapiens]
gi|94315232|gb|ABF14462.1| early onset breast cancer 1 [Homo sapiens]
Length = 1822
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|119581338|gb|EAW60934.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
gi|119581345|gb|EAW60941.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
Length = 1822
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|61365365|gb|AAX42696.1| breast cancer 1 early onset [synthetic construct]
Length = 1864
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|61355355|gb|AAX41131.1| breast cancer 1 early onset [synthetic construct]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|410293720|gb|JAA25460.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|410266754|gb|JAA21343.1| breast cancer 1, early onset [Pan troglodytes]
Length = 760
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|353441749|gb|AEQ98814.1| breast and ovarian cancer sususceptibility protein 1 [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|119581333|gb|EAW60929.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581337|gb|EAW60933.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581339|gb|EAW60935.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|410358541|gb|JAA44608.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|397485727|ref|XP_003813992.1| PREDICTED: breast cancer type 1 susceptibility protein homolog [Pan
paniscus]
Length = 1849
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|338711847|ref|XP_001492115.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Equus caballus]
Length = 1856
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYE-------AHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRT 155
L+ ++ +E AH +K N S + SI +QS R
Sbjct: 80 SQLVEELLRIIHAFELDTGLQFAHSYSFSKKENDSPERVKEEVSI-----IQSMGYRNRA 134
Query: 156 KKNIQGNEEN 165
K++ Q EN
Sbjct: 135 KRHRQSEPEN 144
>gi|113865841|ref|NP_001038958.1| breast cancer type 1 susceptibility protein homolog [Pan
troglodytes]
gi|37953275|gb|AAR04849.1| BRCA1 [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|147852495|emb|CAN78516.1| hypothetical protein VITISV_039748 [Vitis vinifera]
Length = 479
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 80 NKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
N ECP CR S+RSLR DPN+D LI+ +YP D+Y
Sbjct: 153 NNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKY 189
>gi|38503185|sp|Q9GKK8.2|BRCA1_PANTR RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|29647953|gb|AAO92399.1|AF479649_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11b [Bos taurus]
Length = 752
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|75874794|gb|ABA29217.1| breast cancer 1 early onset [Homo sapiens]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|169234602|ref|NP_001108421.1| breast cancer type 1 susceptibility protein homolog [Macaca
mulatta]
gi|55976415|sp|Q6J6I9.1|BRCA1_MACMU RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479018|gb|AAT44833.1| breast cancer type 1 [Macaca mulatta]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCRFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|402900432|ref|XP_003913179.1| PREDICTED: LOW QUALITY PROTEIN: breast cancer type 1 susceptibility
protein homolog [Papio anubis]
Length = 1873
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 8 LECPICLELIKEPVSTK-CDHIFCRFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 65
Query: 103 DLLISKI 109
L+ ++
Sbjct: 66 SQLVEEL 72
>gi|12003222|gb|AAG43492.1|AF207822_1 BRCA1 [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|6552299|ref|NP_009225.1| breast cancer type 1 susceptibility protein isoform 1 [Homo
sapiens]
gi|728984|sp|P38398.2|BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein; AltName:
Full=RING finger protein 53
gi|555932|gb|AAA73985.1| breast and ovarian cancer susceptibility [Homo sapiens]
gi|1698399|gb|AAC37594.1| BRCA1 [Homo sapiens]
gi|30039659|gb|AAP12647.1| breast cancer 1, early onset [Homo sapiens]
gi|75874527|gb|ABA29208.1| breast cancer 1 early onset [Homo sapiens]
gi|75874617|gb|ABA29211.1| breast cancer 1 early onset [Homo sapiens]
gi|75874675|gb|ABA29214.1| breast cancer 1 early onset [Homo sapiens]
gi|75874871|gb|ABA29220.1| breast cancer 1 early onset [Homo sapiens]
gi|75874961|gb|ABA29223.1| breast cancer 1 early onset [Homo sapiens]
gi|75875069|gb|ABA29226.1| breast cancer 1 early onset [Homo sapiens]
gi|168278014|dbj|BAG10985.1| breast cancer type 1 susceptibility protein [synthetic construct]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|426238121|ref|XP_004013006.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Ovis aries]
Length = 1862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|410266746|gb|JAA21339.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266748|gb|JAA21340.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266750|gb|JAA21341.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266752|gb|JAA21342.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266756|gb|JAA21344.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|383421039|gb|AFH33733.1| breast cancer type 1 susceptibility protein isoform 1 [Macaca
mulatta]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCRFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|410210842|gb|JAA02640.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|355754208|gb|EHH58173.1| hypothetical protein EGM_07963 [Macaca fascicularis]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCRFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|402218750|gb|EJT98826.1| hypothetical protein DACRYDRAFT_118588 [Dacryopinax sp. DJM-731
SS1]
Length = 624
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
+L +EL C C +L + + C H FC+ C+++ +R+G CPTCR S S R
Sbjct: 68 ALEAELSCACCAGLLHRPALLQPCNHAFCASCVVSWVRNGGTACPTCRSPSDSIHSARFL 127
Query: 100 PN-FDLLI 106
N DLL+
Sbjct: 128 QNMIDLLV 135
>gi|224082740|ref|XP_002306821.1| predicted protein [Populus trichocarpa]
gi|222856270|gb|EEE93817.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR-SGNKECPTCRKKL-- 90
+ V ++ + + CP+C +L+ T ECLH FC CI + G CP C L
Sbjct: 11 VKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLGC 70
Query: 91 VSKRSLRADPNFDLLISKIYP-SRDEYEAHQV 121
+ LR D N + SKI+P R + EA +V
Sbjct: 71 IPLEKLRPDHNLQDVRSKIFPYKRRKVEAPEV 102
>gi|119581341|gb|EAW60937.1| breast cancer 1, early onset, isoform CRA_k [Homo sapiens]
Length = 1496
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|237681123|ref|NP_009229.2| breast cancer type 1 susceptibility protein isoform 4 [Homo
sapiens]
gi|119581329|gb|EAW60925.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
gi|119581336|gb|EAW60932.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
Length = 759
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|55976414|sp|Q6J6I8.1|BRCA1_GORGO RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479022|gb|AAT44835.1| breast cancer type 1 [Gorilla gorilla]
Length = 1863
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|1498737|gb|AAC00049.1| Brca1-delta11b [Homo sapiens]
Length = 759
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|291406195|ref|XP_002719221.1| PREDICTED: breast cancer 1, early onset [Oryctolagus cuniculus]
Length = 761
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|449455272|ref|XP_004145377.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449474218|ref|XP_004154108.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKK 89
N + V ++ + + CP+C +LK+ T ECLH FC CI + E CP C
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 90 L--VSKRSLRADPNFDLLISKIYPSR 113
L LR D N + L +KI+PS+
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFPSK 88
>gi|443724036|gb|ELU12223.1| hypothetical protein CAPTEDRAFT_208517 [Capitella teleta]
Length = 263
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRA 98
++ SEL+CPIC + + T+ C H FCS CI T LR N+ CP R+ + S+ RSL
Sbjct: 146 AMDSELVCPICCEYFVQA-TSLNCSHTFCSACIETWLRQ-NRGCPQFRQIVTSRVRSLAL 203
Query: 99 DPNFDLLISKIYPSRDEYEA 118
D + D L+ S++E EA
Sbjct: 204 DNHIDRLVDA--ASQEEKEA 221
>gi|119581326|gb|EAW60922.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
gi|119581330|gb|EAW60926.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
Length = 719
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|119581327|gb|EAW60923.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
gi|119581342|gb|EAW60938.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
Length = 721
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|242086134|ref|XP_002443492.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
gi|241944185|gb|EES17330.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
Length = 489
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL----VSKRSLRAD 99
L CP+C +L+K T ECLH FC CI L + + CP C L V K LRAD
Sbjct: 86 LTCPLCDRLLRKATTISECLHTFCRKCIYKKLNDEDLDHCPVCNIDLGCTPVDK--LRAD 143
Query: 100 PNFDLLISKIYP 111
N + SK++P
Sbjct: 144 HNIQDVRSKVFP 155
>gi|119581328|gb|EAW60924.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
gi|119581340|gb|EAW60936.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
Length = 1598
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|449530319|ref|XP_004172143.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKK 89
N + V ++ + + CP+C +LK+ T ECLH FC CI + E CP C
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 90 L--VSKRSLRADPNFDLLISKIYPSR 113
L LR D N + L +KI+PS+
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFPSK 88
>gi|356538599|ref|XP_003537790.1| PREDICTED: uncharacterized protein LOC100792853 [Glycine max]
Length = 205
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + M+T+ C H FC DCI A+ S +CPTCRKK+V+K +R
Sbjct: 150 CPICMGPMVHEMSTR-CGHIFCKDCIKAAI-SAQGKCPTCRKKVVAKDLIRV 199
>gi|119581334|gb|EAW60930.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
gi|119581344|gb|EAW60940.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
Length = 1624
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|338711849|ref|XP_001492138.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Equus caballus]
Length = 755
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYE-------AHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRT 155
L+ ++ +E AH +K N S + SI +QS R
Sbjct: 80 SQLVEELLRIIHAFELDTGLQFAHSYSFSKKENDSPERVKEEVSI-----IQSMGYRNRA 134
Query: 156 KKNIQGNEEN 165
K++ Q EN
Sbjct: 135 KRHRQSEPEN 144
>gi|29647951|gb|AAO92398.1|AF479648_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11 [Bos taurus]
Length = 715
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|37537746|gb|AAQ92977.1| IRIS [Homo sapiens]
Length = 1399
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|255080104|ref|XP_002503632.1| predicted protein [Micromonas sp. RCC299]
gi|226518899|gb|ACO64890.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 38 PRSLHSELMCPICLDMLK-KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
P+S + C IC+D++K K M + C H FC DCI AL+ + CP CRK L
Sbjct: 144 PQSAGKGIKCVICMDVIKSKEMASTTCGHVFCYDCIREALKHTPRRCPQCRKSL 197
>gi|449433281|ref|XP_004134426.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449504181|ref|XP_004162275.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
L CP+C ++ T ECLH FC DCI + E CP C L V LRAD
Sbjct: 19 LTCPLCHNLFTNATTISECLHTFCRDCIYEKIAEEELEGCPVCNTNLGGVPLEKLRADHT 78
Query: 102 FDLLISKIY 110
D L KI+
Sbjct: 79 MDDLREKIF 87
>gi|119581343|gb|EAW60939.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
gi|119581346|gb|EAW60942.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
Length = 680
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|440904221|gb|ELR54760.1| Polycomb group RING finger protein 2 [Bos grunniens mutus]
Length = 353
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV------------RVLEKLNKSHSQAAL 136
+D ++ K+ P RD Y A+ + VLE+ + S +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEI 130
Query: 137 VQ---SINEGIKLQSQHRLQRTKKNIQGNEEN 165
V EG L R ++ +G EN
Sbjct: 131 VSLSIEFYEGFPLLHSFSFCRDREEKKGPLEN 162
>gi|351725147|ref|NP_001237594.1| uncharacterized protein LOC100306616 [Glycine max]
gi|255629089|gb|ACU14889.1| unknown [Glycine max]
Length = 205
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + M+T+ C H FC DCI A+ S +CPTCRKK+V+K +R
Sbjct: 150 CPICMGPMVHEMSTR-CGHIFCKDCIKAAI-SAQGKCPTCRKKVVAKDLIRV 199
>gi|145495334|ref|XP_001433660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400779|emb|CAK66263.1| unnamed protein product [Paramecium tetraurelia]
Length = 593
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
L EL C IC D L + + C H FC C+ + ECP CR KL R
Sbjct: 175 GLEDELQCTICNDYLFEAVAANPCNHHFCGSCLSNWFKKQTYECPNCRAKLTGVMQARTI 234
Query: 100 PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
N KI P H+ R + LNK + + ++ + I L +Q + +K +
Sbjct: 235 NNLVEKWLKINP-------HEKRTEQLLNKMKEENLIYKNPEQYINLNAQLNYDKQEKKV 287
>gi|395826993|ref|XP_003786695.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Otolemur garnettii]
Length = 1803
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|213626803|gb|AAI70141.1| Breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSLR 97
+ L CPICL+++K+ + TK C H FC C++ L + G CP C+ + V++RSL+
Sbjct: 18 MQKNLECPICLELMKEPVATK-CDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 98 ADPNFDLLI 106
F LL+
Sbjct: 76 ESHRFKLLV 84
>gi|167560893|ref|NP_001107963.1| breast cancer 1, early onset [Xenopus (Silurana) tropicalis]
gi|166796759|gb|AAI59160.1| brca1 protein [Xenopus (Silurana) tropicalis]
Length = 1592
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKLVSKRSLR 97
+ L CPICL+++K+ + TK C H FC C++ L KE CP C+ + V++RSL+
Sbjct: 13 MQKNLECPICLELMKEPVATK-CDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRRSLQ 70
Query: 98 ADPNFDLLISKI 109
F LL+ +
Sbjct: 71 ESHRFKLLVEGL 82
>gi|195150625|ref|XP_002016251.1| GL10594 [Drosophila persimilis]
gi|194110098|gb|EDW32141.1| GL10594 [Drosophila persimilis]
Length = 1624
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 27 AITDNTEI--AVSPR-----SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
A NTE+ A +PR +++ ++C +C L T ECLH FC C+I LR
Sbjct: 256 AAPGNTELVTATTPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK- 314
Query: 80 NKECPTCRKKL-VSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
++ CP C + +K ++++D ++ K+ P E E + R K
Sbjct: 315 DRFCPRCEMVINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYK 362
>gi|332260959|ref|XP_003279548.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 5 [Nomascus leucogenys]
Length = 699
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|426348156|ref|XP_004041705.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Gorilla gorilla gorilla]
Length = 1399
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|198457431|ref|XP_001360669.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
gi|198135975|gb|EAL25244.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
Length = 1591
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 27 AITDNTEI--AVSPR-----SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
A NTE+ A +PR +++ ++C +C L T ECLH FC C+I LR
Sbjct: 222 AAPGNTELVTATTPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK- 280
Query: 80 NKECPTCRKKL-VSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
++ CP C + +K ++++D ++ K+ P E E + R K
Sbjct: 281 DRFCPRCEMVINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYK 328
>gi|449276118|gb|EMC84792.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 662
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 46 MCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS-KRSLRADPNFD 103
CP+C D ++ CLHRFC CI+ S ECP C+++++S S+RAD +F+
Sbjct: 333 FCPVCQDSWEEASYVTPCLHRFCYPCILQWAES-KPECPLCKRRILSIVHSVRADDDFE 390
>gi|71027873|ref|XP_763580.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350533|gb|EAN31297.1| hypothetical protein TP03_0552 [Theileria parva]
Length = 735
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK--RSLRADPNF 102
L CP+C + T ++C+H FC C+I + CPTC ++S + D N
Sbjct: 270 LTCPLCKGLFHNAQTIRDCMHTFCKSCLILSTFENGLVCPTCFSPILSSITEGVEPDTNI 329
Query: 103 DLLISKIYP 111
++ K++P
Sbjct: 330 QTIVDKLFP 338
>gi|148227230|ref|NP_001084248.1| breast cancer 1, early onset [Xenopus laevis]
gi|15991720|gb|AAL13037.1|AF416868_1 breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSLR 97
+ L CPICL+++K+ + TK C H FC C++ L + G CP C+ + V++RSL+
Sbjct: 18 MQKNLECPICLELMKEPVATK-CDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 98 ADPNFDLLI 106
F LL+
Sbjct: 76 ESHRFKLLV 84
>gi|426238123|ref|XP_004013007.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Ovis aries]
Length = 763
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|335297607|ref|XP_003358078.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Sus scrofa]
Length = 759
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|167536280|ref|XP_001749812.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771739|gb|EDQ85401.1| predicted protein [Monosiga brevicollis MX1]
Length = 538
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 37 SPRSLHSE--LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
SP +L+SE CP+CLD+L + + T +C H FC +C+ +L S N+ CP CR+++
Sbjct: 4 SPEALNSEGSAKCPVCLDVLAEGVYT-DCRHGFCFECLRESL-SRNRACPVCRRRV 57
>gi|293331779|ref|NP_001168287.1| uncharacterized LOC100382051 [Zea mays]
gi|223947229|gb|ACN27698.1| unknown [Zea mays]
gi|414877923|tpg|DAA55054.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 486
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 31 NTEIAVSPRSLHSE-LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRK 88
++ +A+ R L + L CP+C +L++ T ECLH FC CI L + + CP C+
Sbjct: 67 DSAVAMVKRELLTRCLTCPLCDHLLRQATTISECLHTFCRKCIYKKLNDEDLDHCPVCKI 126
Query: 89 KL--VSKRSLRADPNFDLLISKIYP 111
L LRAD N + SK +P
Sbjct: 127 DLGCTPVEKLRADHNIQDVRSKFFP 151
>gi|148702106|gb|EDL34053.1| breast cancer 1 [Mus musculus]
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|327266650|ref|XP_003218117.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 697
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%)
Query: 37 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
S + L EL CPICL KK + C H FC C+ CP CRKK+
Sbjct: 6 SVKKLCEELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCRKKM 59
>gi|326500362|dbj|BAK06270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 985
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L+ ++ C H FCSDC++ +++S + CP C+ +R +R P
Sbjct: 10 MGRELKCPICLSLLRSAVSVT-CNHIFCSDCLMESMKS-SSSCPVCKVPF-RRREIRPAP 66
Query: 101 NFDLLIS 107
+ D L+
Sbjct: 67 HMDNLVG 73
>gi|237681125|ref|NP_009230.2| breast cancer type 1 susceptibility protein isoform 5 [Homo
sapiens]
gi|47939870|gb|AAH72418.1| BRCA1 protein [Homo sapiens]
Length = 699
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|4097808|gb|AAD00168.1| Brca1 [Mus musculus]
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|224075260|ref|XP_002304583.1| predicted protein [Populus trichocarpa]
gi|222842015|gb|EEE79562.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+D +K+ +TK C H FC CI AL + K+CPTCR K ++K R
Sbjct: 185 FCCPICMDEMKEATSTK-CGHVFCKSCIEKAL-AVQKKCPTCRMKCIAKSIFR 235
>gi|969172|gb|AAA96393.1| breast/ovarian cancer susceptibility protein homolog [Mus musculus]
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|297848954|ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338200|gb|EFH68617.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS 92
I V ++ + CP+C ++L+ T ECLH FC CI + E CP C L
Sbjct: 4 IKVKKETMRACFSCPLCDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGG 63
Query: 93 K--RSLRADPNFDLLISKIYP-SRDEYEAHQVRVLEKLNKSHSQAALVQS 139
LR D N L +KI+P R + +A + + K S ++LV S
Sbjct: 64 TPLEKLRPDHNLQDLRAKIFPLKRRKVKAPGIASVLAKRKERSISSLVVS 113
>gi|161016835|ref|NP_033894.3| breast cancer type 1 susceptibility protein homolog [Mus musculus]
gi|408360314|sp|P48754.3|BRCA1_MOUSE RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|1049263|gb|AAC52323.1| breast and ovarian cancer susceptibility protein [Mus musculus]
gi|1585892|prf||2202221A Brca1 gene
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|988214|gb|AAB17114.1| breast/ovarian cancer susceptibility homolog [Mus musculus]
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|1040961|gb|AAB17113.1| human BRCA1 homolog; Method: conceptual translation supplied by
author [Mus musculus]
Length = 1812
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|46329772|gb|AAH68303.1| Breast cancer 1 [Mus musculus]
Length = 1811
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>gi|258596895|ref|XP_001349606.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254688468|gb|AAC71877.3| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 568
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 46 MCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLV-SKRSLRADPNFD 103
+CPICL ++ + +T C H FC C+ TA++ + + CP+CR K+V K S + D +
Sbjct: 213 ICPICLSLIHEPVTLNSCFHSFCWKCLATAIQKYSIDNCPSCRTKIVYDKNSFKIDGILN 272
Query: 104 LLISKIYPS 112
+ K + S
Sbjct: 273 QFLEKHFLS 281
>gi|326917562|ref|XP_003205066.1| PREDICTED: e3 ubiquitin-protein ligase RNF138-like [Meleagris
gallopavo]
Length = 246
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
E A + R + CPIC ++ K + T C H FC C +TA+R CP CR +
Sbjct: 2 AEEAAAARFSEEDFYCPICQEVFKTPVRTMNCQHVFCRKCFLTAMRESGTHCPLCRGSVT 61
Query: 92 SK 93
K
Sbjct: 62 KK 63
>gi|255559945|ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
gi|223539828|gb|EEF41408.1| ring finger protein, putative [Ricinus communis]
Length = 520
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-GNKECPTCRKK 89
N + V ++ + + CP+C +LK T ECLH FC CI + G + CP C
Sbjct: 3 NQVVKVKRDTIAACMTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICNID 62
Query: 90 L--VSKRSLRADPNFDLLISKIYP-SRDEYEAHQV 121
L V LR D N + +KI+P R + EA +V
Sbjct: 63 LGCVPLEKLRPDHNLQDVRAKIFPFKRRKVEAPEV 97
>gi|116283824|gb|AAH30969.1| BRCA1 protein [Homo sapiens]
Length = 657
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|363730755|ref|XP_419180.3| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Gallus gallus]
Length = 246
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
E A + R + CPIC ++ K + T C H FC C +TA+R CP CR +
Sbjct: 2 AEEAAAARFSEEDFYCPICQEVFKTPVRTMNCQHVFCRKCFLTAMRESGTHCPLCRGSVT 61
Query: 92 SK 93
K
Sbjct: 62 KK 63
>gi|348688912|gb|EGZ28726.1| hypothetical protein PHYSODRAFT_322360 [Phytophthora sojae]
Length = 811
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
R L + C +C D K + +K C H FC +CI L+S N++CPTC+K
Sbjct: 750 RDLQKLVNCSVCQDRRKDVIISK-CFHMFCKECIENNLKSRNRKCPTCKK 798
>gi|428175777|gb|EKX44665.1| hypothetical protein GUITHDRAFT_109441 [Guillardia theta CCMP2712]
Length = 364
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-----CPTCRKKLVSK 93
++ ++L CPICLD++ + +T EC H FC CI T + + ++ CP CRK + +
Sbjct: 59 KAFENDLTCPICLDLVARPVTLTECGHTFCFLCIRTNISTVQQQHLVPSCPNCRKNITTA 118
Query: 94 RSLRADPNFDLLISKIYPS--RDEYEAHQVRVLEKLNKSHSQA 134
S PN L+I K + + ++ Q ++ KLN++ +A
Sbjct: 119 PSA---PN--LMIEKCVKTLIGSKPQSEQAELMNKLNEAAQRA 156
>gi|340505176|gb|EGR31533.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 192
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI----ITALRSGNKECPTCRK 88
I + + +H+ CPICL++L + +T C H FC CI L+ ++CP CRK
Sbjct: 27 HIQIILQLIHTMFECPICLNILLRPVTL-TCGHNFCEQCIKNEQFCLLK---QQCPVCRK 82
Query: 89 -KLVSKRSLRADPNFDLLISKIYPSRDEYE 117
LV+ R ++ + D+ I++ + + EY+
Sbjct: 83 LFLVNLRIIKVNLLLDIFINEYFKNNKEYQ 112
>gi|125562266|gb|EAZ07714.1| hypothetical protein OsI_29971 [Oryza sativa Indica Group]
Length = 449
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A T T V+P+ CP+CL+ L K TT C H FC CI L++ K+CPTC
Sbjct: 373 AQTSTTHAKVAPKE--PTFTCPVCLNKLDKPSTT-NCGHIFCEKCIQACLKA-QKKCPTC 428
Query: 87 RKKL 90
RK L
Sbjct: 429 RKSL 432
>gi|403279413|ref|XP_003931245.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 8 GTTKSWELSMYELNRTPQEAITD-NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHR 66
G ++++ + TP I T I ++ L+ LMC +C T ECLH
Sbjct: 7 GGPRAYKRATIPSPPTPDPGIMHRTTRIKIT--ELNPHLMCALCGGYFIDATTIVECLHS 64
Query: 67 FCSDCIITALRSGNKECPTCRKKLVSKR---SLRADPNFDLLISKIYPS---------RD 114
FC CI+ L + NK CP C ++ R S+R+D ++ K+ P RD
Sbjct: 65 FCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRD 123
Query: 115 EYEAHQV 121
Y A+ +
Sbjct: 124 FYAAYPL 130
>gi|357161750|ref|XP_003579192.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 479
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKL-- 90
+ V +L + CP+C L++ T ECLH FC CI L CP C+ L
Sbjct: 76 VKVKKENLAPRITCPLCQRYLREATTICECLHTFCRKCIYKKLAVEELNHCPVCKIDLGC 135
Query: 91 VSKRSLRADPNFDLLISKIYPSRDE 115
LRAD N L SK+ P + +
Sbjct: 136 APAEKLRADHNLQALRSKLIPVKGK 160
>gi|390473929|ref|XP_003734694.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF138
[Callithrix jacchus]
Length = 332
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 102 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGAHCPLCRGNVT--RRERACPERA 159
Query: 104 LLISKI 109
L + I
Sbjct: 160 LDLENI 165
>gi|198436831|ref|XP_002127685.1| PREDICTED: similar to Os01g0919500 isoform 1 [Ciona intestinalis]
Length = 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 44 ELMCPICLDMLKKTMT------TKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
E+ CP+CL+ LK ++ + C H FC +CI A+RS +K+CPTCR+KL K
Sbjct: 160 EINCPVCLETLKTILSQGNEIRSTVCGHVFCHNCISLAIRS-SKKCPTCRRKLTLK 214
>gi|303288622|ref|XP_003063599.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454667|gb|EEH51972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 655
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L L C IC D+ ++ + C H +C+ CI L +ECPTCRK+ S+ L+ +
Sbjct: 30 LDESLRCAICQDLFTMPVSLRSCTHSYCALCIRRTLNQFKRECPTCRKE-ASEEDLQPNH 88
Query: 101 NFDLLISKIYPSR 113
L++S +R
Sbjct: 89 ALTLVVSAFKAAR 101
>gi|74194871|dbj|BAE26023.1| unnamed protein product [Mus musculus]
Length = 690
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKIY 110
L ++
Sbjct: 80 SQLAEELL 87
>gi|444713977|gb|ELW54865.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 318
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 29 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 87
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 88 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 120
>gi|348562307|ref|XP_003466952.1| PREDICTED: polycomb group RING finger protein 2-like [Cavia
porcellus]
Length = 344
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|21357313|ref|NP_649596.1| degringolade, isoform A [Drosophila melanogaster]
gi|7296664|gb|AAF51944.1| degringolade, isoform A [Drosophila melanogaster]
gi|16768306|gb|AAL28372.1| GM01182p [Drosophila melanogaster]
gi|220950342|gb|ACL87714.1| CG10981-PA [synthetic construct]
Length = 319
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 47 CPICLDML-KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+D + K+ + +C H FC +CI TA+R+ +K CP C KKL +++ R
Sbjct: 266 CPICMDSVSKREPVSTKCGHVFCRECIETAIRATHK-CPICNKKLTARQFFR 316
>gi|78070589|gb|AAI06746.1| BRCA1 protein [Homo sapiens]
Length = 473
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKI 109
L+ ++
Sbjct: 80 SQLVEEL 86
>gi|158295814|ref|XP_001237808.2| AGAP006403-PA [Anopheles gambiae str. PEST]
gi|157016217|gb|EAU76594.2| AGAP006403-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
S+H + C +C L T ECLH FC CI+ LR+ + CP C + +K +++
Sbjct: 92 SVHPCITCHLCKGYLIDATTIVECLHSFCHSCIMKHLRT-EQYCPQCEMMINKAKPNIKP 150
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAA-----------LVQSINEGIKL 146
D ++ K+ P E E + R +L+ + A L+ S NE I L
Sbjct: 151 DATLQAIVYKLVPRLYENELRRRRAFYRLHPEMATVATPEQRGEDTEYLIFSPNEKISL 209
>gi|395749268|ref|XP_003778916.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Pongo abelii]
Length = 385
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|355568454|gb|EHH24735.1| DNA-binding protein Mel-18 [Macaca mulatta]
Length = 341
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|344285955|ref|XP_003414725.1| PREDICTED: polycomb group RING finger protein 2 [Loxodonta
africana]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|417410052|gb|JAA51507.1| Putative polycomb group ring finger protein 2, partial [Desmodus
rotundus]
Length = 359
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 26 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 84
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 85 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 117
>gi|426348519|ref|XP_004041881.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426348521|ref|XP_004041882.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|402899970|ref|XP_003912956.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Papio
anubis]
gi|402899972|ref|XP_003912957.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Papio
anubis]
gi|402899974|ref|XP_003912958.1| PREDICTED: polycomb group RING finger protein 2 isoform 3 [Papio
anubis]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|355754087|gb|EHH58052.1| DNA-binding protein Mel-18 [Macaca fascicularis]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|114667779|ref|XP_511440.2| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
troglodytes]
gi|397477039|ref|XP_003809893.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Pan
paniscus]
gi|397477041|ref|XP_003809894.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
paniscus]
gi|410051474|ref|XP_003953100.1| PREDICTED: polycomb group RING finger protein 2 [Pan troglodytes]
gi|410210824|gb|JAA02631.1| polycomb group ring finger 2 [Pan troglodytes]
gi|410293958|gb|JAA25579.1| polycomb group ring finger 2 [Pan troglodytes]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|117644306|emb|CAL37647.1| hypothetical protein [synthetic construct]
gi|208967072|dbj|BAG73550.1| polycomb group ring finger 2 [synthetic construct]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|6005964|ref|NP_009075.1| polycomb group RING finger protein 2 [Homo sapiens]
gi|462585|sp|P35227.1|PCGF2_HUMAN RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=RING
finger protein 110; AltName: Full=Zinc finger protein
144
gi|285933|dbj|BAA03074.1| Mel-18 protein [Homo sapiens]
gi|13436062|gb|AAH04858.1| Polycomb group ring finger 2 [Homo sapiens]
gi|18999362|gb|AAH24255.1| Polycomb group ring finger 2 [Homo sapiens]
gi|119580932|gb|EAW60528.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
gi|119580933|gb|EAW60529.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|327266658|ref|XP_003218121.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 475
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L EL CPICL+ KK ++ C H FC C+ + CP CRK+++ K +R
Sbjct: 8 KELREELACPICLEFFKKPVSIA-CGHNFCQSCLDQYRKEKEASCPQCRKEVL-KEDIR- 64
Query: 99 DPNFDLL 105
PN+ L+
Sbjct: 65 -PNWQLM 70
>gi|149723900|ref|XP_001501632.1| PREDICTED: polycomb group RING finger protein 2 [Equus caballus]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|24644441|ref|NP_731017.1| degringolade, isoform B [Drosophila melanogaster]
gi|23175939|gb|AAN14328.1| degringolade, isoform B [Drosophila melanogaster]
gi|25012446|gb|AAN71329.1| RE22765p [Drosophila melanogaster]
Length = 312
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 47 CPICLDML-KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+D + K+ + +C H FC +CI TA+R+ +K CP C KKL +++ R
Sbjct: 259 CPICMDSVSKREPVSTKCGHVFCRECIETAIRATHK-CPICNKKLTARQFFR 309
>gi|395826556|ref|XP_003786483.1| PREDICTED: polycomb group RING finger protein 2 [Otolemur
garnettii]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|388454613|ref|NP_001252868.1| polycomb group RING finger protein 2 [Macaca mulatta]
gi|387542154|gb|AFJ71704.1| polycomb group RING finger protein 2 [Macaca mulatta]
Length = 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|30584759|gb|AAP36632.1| Homo sapiens zinc finger protein 144 (Mel-18) [synthetic construct]
gi|60652807|gb|AAX29098.1| ring finger protein 110 [synthetic construct]
Length = 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|42407630|dbj|BAD08744.1| unknown protein [Oryza sativa Japonica Group]
gi|42761408|dbj|BAD11573.1| unknown protein [Oryza sativa Japonica Group]
Length = 449
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A T T V+P+ CP+CL+ L K TT C H FC CI L++ K+CPTC
Sbjct: 373 AQTSTTHAKVAPKE--PTFTCPVCLNKLDKPSTT-NCGHIFCEKCIQAWLKA-QKKCPTC 428
Query: 87 RKKL 90
RK L
Sbjct: 429 RKSL 432
>gi|357133046|ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Brachypodium distachyon]
Length = 993
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL +L+ ++ C H FC+DC+ +++S + CP C+ +R +R P
Sbjct: 10 MGRELKCPICLSLLRSAVSV-TCNHIFCNDCLTESMKSAS-SCPVCKVPF-RRREIRPAP 66
Query: 101 NFDLLIS 107
+ D L+S
Sbjct: 67 HMDNLVS 73
>gi|38086587|ref|XP_142049.3| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
gi|83002894|ref|XP_913741.1| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
Length = 230
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLRADPN 101
+ C IC L T ECLH FC CI+ N+ CP C + ++LR DP
Sbjct: 119 ISCFICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CPKCNIIVHQAKPHKNLRMDPQ 177
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNKSH 131
++ K+ +E E Q R + NK H
Sbjct: 178 LQSIVYKLVAGLEENEKKQRR---EFNKEH 204
>gi|345492867|ref|XP_001599329.2| PREDICTED: hypothetical protein LOC100114244 [Nasonia vitripennis]
Length = 1499
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPN 101
L C ICLD KK +T K C H+FC CI+ + N CP C K +RS+ + N
Sbjct: 25 LTCSICLDYFKKPVTIK-CGHKFCQGCILEVANNDNASCPLCNTKF-QRRSIHKENN 79
>gi|427781769|gb|JAA56336.1| Putative polycomb group ring finger protein 3 [Rhipicephalus
pulchellus]
Length = 238
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
PQE+++ E + ++L++ ++C IC L T ECLH FC C++ L N C
Sbjct: 5 PQESLSRQMERRIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNN-TC 63
Query: 84 PTC 86
PTC
Sbjct: 64 PTC 66
>gi|387017720|gb|AFJ50978.1| Polycomb complex protein BMI-1-like [Crotalus adamanteus]
Length = 327
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC IC T ECLH FC CI+ L S +K CP C ++ R L R
Sbjct: 12 LNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLES-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|296202674|ref|XP_002748549.1| PREDICTED: polycomb group RING finger protein 2 [Callithrix
jacchus]
Length = 344
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|403279411|ref|XP_003931244.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|327275580|ref|XP_003222551.1| PREDICTED: polycomb group RING finger protein 2-like [Anolis
carolinensis]
Length = 337
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|426237855|ref|XP_004012873.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Ovis aries]
Length = 324
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|357488403|ref|XP_003614489.1| RING finger protein [Medicago truncatula]
gi|355515824|gb|AES97447.1| RING finger protein [Medicago truncatula]
Length = 164
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL 96
CPIC+ + MTTK C H FC CI A+++ K CPTCRKK+ S R L
Sbjct: 108 CPICMGPFVEEMTTK-CGHIFCKTCIKDAIKAQAK-CPTCRKKITSVRQL 155
>gi|168028370|ref|XP_001766701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682133|gb|EDQ68554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 41/234 (17%)
Query: 22 RTPQEAITDN-TEIAVSPR-SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
RT + DN E+A++ + +L + +CPIC+ +K T C H FC CI+T L S
Sbjct: 26 RTGSWSSQDNKCELAMASKPALDKDFLCPICIQTMKDAFLTA-CGHSFCYTCIMTHL-SN 83
Query: 80 NKECPTCRKKLVSKRSLRADPNFDL-----------LISKIYPSRDEYEAHQ------VR 122
CP C + L + + PNF L L+S P+ A Q V+
Sbjct: 84 KSNCPCCGQYLTNNQLF---PNFLLNKLLRKASASQLVSNASPAEHLRLALQQGVDLPVK 140
Query: 123 VLEKL-----NKSHSQAALVQSINEGIKLQSQHRLQRTKKN-----IQGNEENTP-DISN 171
L+ L +K N I L+ HR R +KN +QG+ + DIS
Sbjct: 141 ELDSLMHLLSDKKRKAEQEEAEANMEILLEFLHR-SRQQKNEELNLLQGDLQFLKEDIST 199
Query: 172 TDQTSVQQQPSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKS 225
++ Q+Q T NA+K ++ P S +RP + A++ T + T++S
Sbjct: 200 VEK---QRQDLLHITEKNALKIRMIAGGPSS--SRPDTLATNENTSKGEATSQS 248
>gi|380797429|gb|AFE70590.1| E3 ubiquitin-protein ligase RNF138 isoform 3, partial [Macaca
mulatta]
gi|380797431|gb|AFE70591.1| E3 ubiquitin-protein ligase RNF138 isoform 3, partial [Macaca
mulatta]
Length = 278
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 23 TPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE 82
+P A+ ++ A S + CP+C ++LK + T C H FC C +TA+R
Sbjct: 29 SPSPAMAEDLSAATS--YTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGAH 86
Query: 83 CPTCRKKLVSKRSLRADPNFDLLISKI 109
CP CR + R RA P L + I
Sbjct: 87 CPLCRGNVT--RRERACPERALDLENI 111
>gi|354497382|ref|XP_003510799.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
gi|344247413|gb|EGW03517.1| Polycomb group RING finger protein 6 [Cricetulus griseus]
Length = 213
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 29 TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
+D E V L + C IC L T ECLH FC CI+ N+ CP C
Sbjct: 86 SDQEERCVPLSQLTPYISCSICKGYLIDATTITECLHSFCKSCIVKHFDHSNR-CPKCSI 144
Query: 89 KLVSKRS---LRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
+ R LR DP+ ++ K+ +E E Q R K N
Sbjct: 145 VVHQSRPHSKLRLDPHLQNIVYKVVAGLEEKEKKQRREFSKEN 187
>gi|225437241|ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
gi|297735508|emb|CBI17948.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKK 89
N + V ++ + + CP+C +L+ T ECLH FC CI + E CP C
Sbjct: 3 NQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICNTD 62
Query: 90 L--VSKRSLRADPNFDLLISKIYP-SRDEYEAHQVRV---LEKLNKSHSQAALVQSINEG 143
L V LR D N + +KI+P R + +A +V + L K S ++LV S
Sbjct: 63 LGCVPLEKLRPDHNLQDVRAKIFPFKRRKVKAPEVVLPVTLPVKRKERSLSSLVVSTPR- 121
Query: 144 IKLQSQHRLQRTKK------NIQGNEENTPDISNTDQTSVQQQP--SPQPTTSNAIKNQL 195
+ Q+ +RTK ++G+ + + ++ SV ++P S P T N +
Sbjct: 122 VSTQTTMTGRRTKSVARKATALRGSGFSIEKLIKKEEDSVGERPASSSSPETLNKFTQNI 181
Query: 196 SPAVPKSPEARPS 208
SP A PS
Sbjct: 182 R---QNSPSAEPS 191
>gi|198414702|ref|XP_002129324.1| PREDICTED: similar to Polycomb complex protein BMI-1 (Polycomb
group RING finger protein 4) (RING finger protein 51)
[Ciona intestinalis]
Length = 1188
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
N + + R LH + C +C T ECLH FC CI+ L + CP CR ++
Sbjct: 2 NRSVKLRVRDLHPHVTCHLCNGYFIDATTIIECLHSFCRTCIVRYL-ENRRSCPVCRVQV 60
Query: 91 VSKRSL---RADPNFDLLISKIYPS 112
R L R+D ++ K+ P
Sbjct: 61 HKTRPLLNIRSDQTLQDIVYKLVPG 85
>gi|354474513|ref|XP_003499475.1| PREDICTED: polycomb complex protein BMI-1-like [Cricetulus griseus]
Length = 523
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 199 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 248
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 249 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 300
>gi|198436833|ref|XP_002127744.1| PREDICTED: similar to Os01g0919500 isoform 2 [Ciona intestinalis]
Length = 202
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 44 ELMCPICLDMLKKTMT------TKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
E+ CP+CL+ LK ++ + C H FC +CI A+RS +K+CPTCR+KL K
Sbjct: 138 EINCPVCLETLKTILSQGNEIRSTVCGHVFCHNCISLAIRS-SKKCPTCRRKLTLK 192
>gi|148225863|ref|NP_001088007.1| polycomb complex protein BMI-1-B [Xenopus laevis]
gi|82198007|sp|Q640D5.1|BMI1B_XENLA RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|52138943|gb|AAH82694.1| LOC494698 protein [Xenopus laevis]
Length = 323
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
AD ++ K+ P RD Y AH
Sbjct: 71 ADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH 101
>gi|354474807|ref|XP_003499621.1| PREDICTED: polycomb group RING finger protein 2-like [Cricetulus
griseus]
Length = 342
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|119580931|gb|EAW60527.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
gi|119580934|gb|EAW60530.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
Length = 257
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y A+
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY 101
>gi|307189311|gb|EFN73742.1| Polycomb complex protein BMI-1-B [Camponotus floridanus]
Length = 371
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
+ L+ ++CP+C L T ECLH FC CI+ L SG + CP C
Sbjct: 142 KDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC 189
>gi|443729762|gb|ELU15565.1| hypothetical protein CAPTEDRAFT_220183 [Capitella teleta]
Length = 537
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-- 82
QE I N E A + +EL+CPIC + + T+ C H FC+ CI L+ +
Sbjct: 371 QEKIRRNLEEA-----MENELVCPICSEYFVQA-TSLNCSHTFCAACIEKWLKQKQGKTR 424
Query: 83 -CPTCRKKLVSK-RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQ 138
CP CR+ + S RSL D + D L+ + EA + R L K ++ Q ALV+
Sbjct: 425 CCPQCRQTVTSSVRSLALDNHIDHLMENMSE-----EARKARCLLKDHRKKIQDALVE 477
>gi|393009465|gb|AFN02447.1| posterior sex combs [Bombyx mori]
Length = 1096
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 30 DNTEIAVSP-RSLHSE----LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
DN+ +AV P R+L E + CP+C T ECLH FC CII L++ + CP
Sbjct: 16 DNSNVAVVPQRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKS-YCP 74
Query: 85 TCRKKLVS-KRSLRADPNFDLLISKIYPS 112
C + S K +++ D ++ K+ P
Sbjct: 75 VCEMMINSAKPNIKLDKALQDIVYKLVPG 103
>gi|355709609|gb|AES03649.1| Polycomb group RING finger protein 2 [Mustela putorius furo]
Length = 344
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|145502955|ref|XP_001437455.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404605|emb|CAK70058.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
R +L+CPICL++ +K +TT +C H FC CI +L ECP CR K + S +
Sbjct: 55 RPKFEDLICPICLEIFQK-VTTTQCGHAFCEMCIFDSLMR-KAECPVCRVK-IKTHSFQY 111
Query: 99 DPNFDLLISKI---YPSRDEYEAHQVRV--LEKLNKS 130
+FD I + Y + + E Q R +E+ NKS
Sbjct: 112 CESFDNRIVDLVNQYGDKAQIEHFQNRRQEMEQWNKS 148
>gi|336389941|gb|EGO31084.1| hypothetical protein SERLADRAFT_444658 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1111
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-----ECPTCRKKLVSKRSL 96
CPICLD+++ +C+HR C DCII+ L + N+ CPTC + + L
Sbjct: 848 CPICLDVMETPTIIPDCMHRCCKDCIISYLEACNERGEEGRCPTCSRGPIKDHEL 902
>gi|148682085|gb|EDL14032.1| mCG1030969 [Mus musculus]
Length = 257
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLRADPN 101
+ C IC L T ECLH FC CI+ N+ CP C + ++LR DP
Sbjct: 146 ISCFICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CPKCNIIVHQAKPHKNLRMDPQ 204
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNKSH 131
++ K+ +E E Q R + NK H
Sbjct: 205 LQSIVYKLVAGLEENEKKQRR---EFNKEH 231
>gi|221136916|ref|NP_001137578.1| polycomb group RING finger protein 2 [Bos taurus]
gi|296476466|tpg|DAA18581.1| TPA: polycomb group ring finger 2 [Bos taurus]
Length = 344
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|62858263|ref|NP_001015995.1| BMI1 polycomb ring finger oncogene [Xenopus (Silurana) tropicalis]
gi|163916023|gb|AAI57201.1| hypothetical protein LOC548749 [Xenopus (Silurana) tropicalis]
Length = 325
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
AD ++ K+ P RD Y AH
Sbjct: 71 ADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH 101
>gi|170089993|ref|XP_001876219.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649479|gb|EDR13721.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 494
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 29 TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
TD T+++ P L +L C C +++ + + C H FC C + +R+G CP CR
Sbjct: 62 TDVTDMSSFPDELAQDLQCGCCSELVYRPVLVMPCQHFFCGSCCVLWIRNGGTNCPACRG 121
Query: 89 KLVSKRSLRADPNFDLLISKIYP--SRDEYEAHQVRVLEKLNKS 130
+ RA + ++ P +R E E Q L K+ +S
Sbjct: 122 QSTIVSPFRALQTVVDTLLRLAPHKARTEREREQADELYKVGQS 165
>gi|114606233|ref|XP_001148040.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 1 [Pan
troglodytes]
Length = 474
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|19075245|ref|NP_587745.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638645|sp|Q9P3U8.1|YJ95_SCHPO RecName: Full=Uncharacterized RING finger protein C548.05c
gi|8670896|emb|CAB94947.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 468
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T+ S T+ ++ S N ++ I D + + + + L CPIC + L++ TT
Sbjct: 40 TTFASSDATQMYKKSRISSNSENKKQIPDTKTLLETFQKIKKTLECPICTEALQRPFTTH 99
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
C H +C +C++ L+ +K CPTCR+KL ++ S
Sbjct: 100 -CGHTYCYECLLNWLKE-SKSCPTCRQKLYTQPS 131
>gi|109121880|ref|XP_001100384.1| PREDICTED: e3 ubiquitin-protein ligase RNF138 isoform 3 [Macaca
mulatta]
gi|109121882|ref|XP_001100574.1| PREDICTED: e3 ubiquitin-protein ligase RNF138 isoform 5 [Macaca
mulatta]
gi|332225666|ref|XP_003262006.1| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Nomascus leucogenys]
gi|402902910|ref|XP_003914331.1| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Papio anubis]
Length = 245
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGAHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|60688659|gb|AAH91711.1| Narf protein [Xenopus laevis]
Length = 222
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
EA++ ++EI E +CP+C ++L+ + T+ C H FC C + A++SG CP
Sbjct: 3 EAMSCSSEIT-------EEFLCPVCQEILQTPVRTQSCRHVFCRKCFMLAMKSGGAYCPL 55
Query: 86 CR 87
CR
Sbjct: 56 CR 57
>gi|332019596|gb|EGI60074.1| Polycomb group protein Psc [Acromyrmex echinatior]
Length = 1364
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+C +C L T ECLH FC CI+ L + CP C+ + +K + +
Sbjct: 11 RDINPHLICLLCRGYLIDATTVGECLHCFCKSCILKYLSTA-AHCPLCKHAINKAKPNFK 69
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAA 135
AD ++ K+ P E + R K + H+ A
Sbjct: 70 ADKALQDIVYKLVPGLYHREMLKRREFYKKHSEHANLA 107
>gi|444731073|gb|ELW71439.1| Polycomb complex protein BMI-1 [Tupaia chinensis]
Length = 383
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 90 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 139
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 140 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 191
>gi|336364831|gb|EGN93185.1| hypothetical protein SERLA73DRAFT_172337 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1051
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-----ECPTCRKKLVSKRSL 96
CPICLD+++ +C+HR C DCII+ L + N+ CPTC + + L
Sbjct: 788 CPICLDVMETPTIIPDCMHRCCKDCIISYLEACNERGEEGRCPTCSRGPIKDHEL 842
>gi|156093978|ref|XP_001613027.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801901|gb|EDL43300.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 559
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 46 MCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVSKR-SLRADPNFD 103
MCPICL ++ +T C H FC +C+ TA++ + + CP+CR K+ R S + D
Sbjct: 266 MCPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDSCPSCRTKIAFDRESFKIDGILC 325
Query: 104 LLISKIY----------PSRDEY----EAHQVRVLEKLNKSH 131
+ K + P R+E EAHQ + ++H
Sbjct: 326 QFLKKHFVSESAAEWGSPPREEAHQGEEAHQGEEAHQGEEAH 367
>gi|403262120|ref|XP_003923443.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Saimiri
boliviensis boliviensis]
Length = 475
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI R+G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCRQRFLLK 61
>gi|410980897|ref|XP_003996810.1| PREDICTED: polycomb group RING finger protein 2 [Felis catus]
Length = 361
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 29 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 87
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 88 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 120
>gi|145523776|ref|XP_001447721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415243|emb|CAK80324.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
R +L+CPICL++ +K TT +C H FC CI +L ECP CR K + S +
Sbjct: 55 RPKFEDLICPICLEIFQKVTTT-QCGHAFCEMCIFDSLMR-KAECPVCRVK-IKTHSFQY 111
Query: 99 DPNFDLLISKI---YPSRDEYEAHQVRVL--EKLNKS 130
+FD I+ + Y + + E + R L E+ NKS
Sbjct: 112 CESFDNRINDLVNEYGDKTQIEHFKNRQLEMEQWNKS 148
>gi|194754545|ref|XP_001959555.1| GF11991 [Drosophila ananassae]
gi|190620853|gb|EDV36377.1| GF11991 [Drosophila ananassae]
Length = 1606
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS-KRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C+ + S K ++++
Sbjct: 238 AVNPHIICHLCTGYLVDATTIVECLHSFCHSCLINHLRK-ERFCPRCKMVINSAKPNIKS 296
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 297 DTTLQAIVYKLVPGLYERELMRKRAFYK 324
>gi|89271831|emb|CAJ82238.1| novel protein similar to brca1 [Xenopus (Silurana) tropicalis]
Length = 548
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKLVSKRSLR 97
+ L CPICL+++K+ + TK C H FC C++ L KE CP C+ + V++RSL+
Sbjct: 13 MQKNLECPICLELMKEPVATK-CDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRRSLQ 70
Query: 98 ADPNFDLLISKI 109
F LL+ +
Sbjct: 71 ESHRFKLLVEGL 82
>gi|296217197|ref|XP_002754899.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Callithrix
jacchus]
Length = 475
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI R+G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCRQRFLLK 61
>gi|426240771|ref|XP_004014267.1| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Ovis
aries]
Length = 469
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|395823035|ref|XP_003784806.1| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Otolemur garnettii]
Length = 245
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGVHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKIYPS 112
R RA P L + I S
Sbjct: 63 -RRERACPERALDLENIMKS 81
>gi|126308194|ref|XP_001366744.1| PREDICTED: polycomb group RING finger protein 2 [Monodelphis
domestica]
Length = 347
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|441660761|ref|XP_004093035.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Nomascus leucogenys]
Length = 286
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y A+
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY 101
>gi|431898266|gb|ELK06961.1| Tripartite motif-containing protein 4 [Pteropus alecto]
Length = 475
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCII--TALRSGNKECPTCRKKLVSKRSLRA 98
L EL CPICLD K ++ EC H FC C+ AL G+ CP CR +L S SLR
Sbjct: 6 LQEELTCPICLDYFKDPVSI-ECGHNFCRGCLKQNWALGGGSFPCPECR-QLSSSASLR- 62
Query: 99 DPNFDL 104
PN+ L
Sbjct: 63 -PNWAL 67
>gi|395532615|ref|XP_003768365.1| PREDICTED: polycomb group RING finger protein 2 [Sarcophilus
harrisii]
Length = 289
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 26 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 84
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y A+
Sbjct: 85 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY 115
>gi|313667084|gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa subsp. chinensis]
Length = 676
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ + L +L+CPIC+ ++K T C H FC CIIT L++ +CP C + L +K
Sbjct: 40 LEIGAPDLDKDLLCPICMQVIKDAFLTA-CGHSFCYMCIITHLKN-KSDCPCCSQHLTNK 97
Query: 94 RSLRADPNFDL 104
+ PNF L
Sbjct: 98 QLY---PNFLL 105
>gi|90960950|dbj|BAE92828.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLXNLVEKI 78
>gi|90960948|dbj|BAE92827.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLXNLVEKI 78
>gi|359320397|ref|XP_548155.4| PREDICTED: polycomb group RING finger protein 2 [Canis lupus
familiaris]
Length = 376
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 44 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 102
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 103 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 135
>gi|21361539|ref|NP_057355.2| E3 ubiquitin-protein ligase RNF138 isoform 1 [Homo sapiens]
gi|395455059|ref|NP_001178253.2| E3 ubiquitin-protein ligase RNF138 isoform 1 [Homo sapiens]
gi|297702463|ref|XP_002828199.1| PREDICTED: E3 ubiquitin-protein ligase RNF138 isoform 2 [Pongo
abelii]
gi|332849653|ref|XP_512083.3| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Pan troglodytes]
gi|426385728|ref|XP_004059354.1| PREDICTED: E3 ubiquitin-protein ligase RNF138-like isoform 1
[Gorilla gorilla gorilla]
gi|74762632|sp|Q8WVD3.1|RN138_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF138; AltName:
Full=Nemo-like kinase-associated RING finger protein;
Short=NLK-associated RING finger protein; Short=hNARF;
AltName: Full=RING finger protein 138
gi|17390234|gb|AAH18107.1| Ring finger protein 138 [Homo sapiens]
gi|30582595|gb|AAP35524.1| STRIN protein [Homo sapiens]
gi|48146417|emb|CAG33431.1| RNF138 [Homo sapiens]
gi|61359984|gb|AAX41794.1| ring finger protein 138 [synthetic construct]
gi|119621685|gb|EAX01280.1| ring finger protein 138, isoform CRA_a [Homo sapiens]
gi|123979682|gb|ABM81670.1| ring finger protein 138 [synthetic construct]
gi|123994477|gb|ABM84840.1| ring finger protein 138 [synthetic construct]
gi|189055130|dbj|BAG38114.1| unnamed protein product [Homo sapiens]
gi|261860126|dbj|BAI46585.1| ring finger protein 138 [synthetic construct]
Length = 245
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|157786680|ref|NP_001099306.1| polycomb group RING finger protein 2 [Rattus norvegicus]
gi|149054053|gb|EDM05870.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054054|gb|EDM05871.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054055|gb|EDM05872.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054056|gb|EDM05873.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469317|gb|AAI67059.1| Pcgf2 protein [Rattus norvegicus]
Length = 342
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|403370330|gb|EJY85028.1| Zinc finger, C3HC4 type domain-containing protein [Oxytricha
trifallax]
Length = 193
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL-RSGNKE-CPTCRKKLVSK 93
+ R LHS L CP+C + T ECL FC CI NKE CP C L +
Sbjct: 16 IKKRDLHSYLKCPLCTGFFRDAHTINECLDTFCKSCIYKYFYEDQNKENCPKCNIHLGGR 75
Query: 94 --RSLRADPNFDLLISKIYPSRDEYEAHQVRVL 124
++ +D ++ +YP + + ++++
Sbjct: 76 PLETIISDQTIQKIVDLLYPQFKKKDEQAIKMM 108
>gi|6468773|gb|AAD46623.2|AF162680_1 HSD-4 protein [Homo sapiens]
Length = 245
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|6678635|ref|NP_033571.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028181|ref|NP_001156779.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028183|ref|NP_001156780.1| polycomb group RING finger protein 2 [Mus musculus]
gi|126937|sp|P23798.2|PCGF2_MOUSE RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=Melanoma
nuclear protein 18; AltName: Full=RING finger protein
110; AltName: Full=Zinc finger protein 144;
Short=Zfp-144
gi|220477|dbj|BAA14122.1| Mel-18 [Mus musculus]
gi|16741134|gb|AAH16419.1| Pcgf2 protein [Mus musculus]
gi|19548758|gb|AAL90776.1| mel-18 protein [Mus musculus]
gi|19548760|gb|AAL90777.1| mel-18 protein [Mus musculus]
gi|148684140|gb|EDL16087.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684141|gb|EDL16088.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684142|gb|EDL16089.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684143|gb|EDL16090.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
Length = 342
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P RD Y A+ +
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPL 103
>gi|15225760|ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + P
Sbjct: 46 LDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQLY---P 100
Query: 101 NFDL 104
NF L
Sbjct: 101 NFLL 104
>gi|397519274|ref|XP_003829791.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Pan paniscus]
Length = 460
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|148233239|ref|NP_001089974.1| E3 ubiquitin-protein ligase RNF138 [Xenopus laevis]
gi|118573796|sp|Q1L721.1|RN138_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF138; AltName:
Full=Nemo-like kinase-associated RING finger protein;
Short=NLK-associated RING finger protein; Short=xNARF;
AltName: Full=RING finger protein 138
gi|67518001|gb|AAY68290.1| NLK-associated RING finger protein [Xenopus laevis]
Length = 222
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
EA++ ++EI E +CP+C ++L+ + T+ C H FC C + A++SG CP
Sbjct: 3 EAMSCSSEIT-------EEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPL 55
Query: 86 CR 87
CR
Sbjct: 56 CR 57
>gi|402685|gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + P
Sbjct: 46 LDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQLY---P 100
Query: 101 NFDL 104
NF L
Sbjct: 101 NFLL 104
>gi|390600158|gb|EIN09553.1| acetyl-CoA synthetase-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1650
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
+R P+ +T ++ +PR L CP+C K+ TT+ C H FC CI +ALR +
Sbjct: 1544 SRLPKGLVTGHS----TPRVGSMRLACPLCARFPKRPATTR-CGHCFCEQCITSALRQ-S 1597
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSR 113
+ CP C ++ P+F S + SR
Sbjct: 1598 RRCPVCMTSASPSHLVKIHPSFIHPRSTVMSSR 1630
>gi|322794453|gb|EFZ17525.1| hypothetical protein SINV_11876 [Solenopsis invicta]
Length = 1378
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLR 97
R ++ L+C +C L T ECLH FC CI+ L + CP+C+ + +K +++
Sbjct: 8 RDVNPHLICLLCRGYLIDATTVVECLHSFCRSCILKYLSTA-AHCPSCKHAINKAKPNIK 66
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVL 124
AD ++ K+ P E + +V+
Sbjct: 67 ADKTLQEIVYKLVPGLYHKEMLKRKVI 93
>gi|403278207|ref|XP_003945245.1| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
[Saimiri boliviensis boliviensis]
Length = 469
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|395827235|ref|XP_003786810.1| PREDICTED: polycomb complex protein BMI-1 [Otolemur garnettii]
Length = 469
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|355562340|gb|EHH18934.1| Polycomb group RING finger protein 4 [Macaca mulatta]
Length = 290
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV--RVLEKLNKSHSQAALVQSINEGIKL 146
+D ++ K+ P RD Y AH R+ K+NK ++ + +N+ L
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYVAHPSADRLDRKVNKDKEKSK--EEVNDKRYL 128
Query: 147 QSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSP 183
+ + T +++ + DI NT Q V + P
Sbjct: 129 RCPAAM--TVMHLRKFLRSKMDIPNTFQIDVMYEEEP 163
>gi|297823085|ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
gi|297325264|gb|EFH55684.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
Length = 675
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + P
Sbjct: 46 LDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQLY---P 100
Query: 101 NFDL 104
NF L
Sbjct: 101 NFLL 104
>gi|148226666|ref|NP_001081790.1| polycomb complex protein BMI-1-A [Xenopus laevis]
gi|49115061|gb|AAH72892.1| Xbmi-1 protein [Xenopus laevis]
Length = 326
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
AD ++ K+ P RD Y AH
Sbjct: 71 ADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH 101
>gi|30584563|gb|AAP36534.1| Homo sapiens STRIN protein [synthetic construct]
gi|61369893|gb|AAX43409.1| ring finger protein 138 [synthetic construct]
gi|61369902|gb|AAX43410.1| ring finger protein 138 [synthetic construct]
Length = 246
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|348556239|ref|XP_003463930.1| PREDICTED: polycomb complex protein BMI-1-like [Cavia porcellus]
Length = 469
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|332862823|ref|XP_001147119.2| PREDICTED: polycomb complex protein BMI-1 isoform 2, partial [Pan
troglodytes]
Length = 332
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 6 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 55
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 56 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 107
>gi|291402220|ref|XP_002717444.1| PREDICTED: BMI1 polycomb ring finger oncogene [Oryctolagus
cuniculus]
Length = 469
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|221053127|ref|XP_002257938.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193807770|emb|CAQ38475.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 528
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSKR-SLRADPNFDL 104
CPICL ++ +T C H FC +C+ TA+++ + +CP+CR K+V R S + D
Sbjct: 260 CPICLCLIHDPVTLNSCFHSFCWNCLATAIQNYSIDKCPSCRTKIVYDRDSFKIDGILSQ 319
Query: 105 LISKIYPSRDEYE 117
+ K + S E
Sbjct: 320 FLKKHFVSESAVE 332
>gi|82217516|sp|Q91648.1|BMI1A_XENLA RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|1086577|gb|AAC59729.1| xbmi-1 [Xenopus laevis]
Length = 326
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
AD ++ K+ P RD Y AH
Sbjct: 71 ADKTLQDIVYKLVPGLFKGEMKRRRDFYAAH 101
>gi|402879774|ref|XP_003903504.1| PREDICTED: polycomb complex protein BMI-1 [Papio anubis]
Length = 469
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|397501528|ref|XP_003821435.1| PREDICTED: polycomb complex protein BMI-1 [Pan paniscus]
Length = 469
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|157818223|ref|NP_001100405.1| uncharacterized protein LOC302366 [Rattus norvegicus]
gi|149055522|gb|EDM07106.1| rCG38166 [Rattus norvegicus]
Length = 232
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLRADPN 101
+ C IC L T ECLH FC CI+ N+ CP C + +LR DP
Sbjct: 121 ISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CPKCNIIVHEAKPHNNLRMDPQ 179
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
++ K+ +E E Q R K N+ +
Sbjct: 180 LQNIVYKLVSGLEEKEKKQRREFYKENRGQT 210
>gi|441625691|ref|XP_003257751.2| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
isoform 2 [Nomascus leucogenys]
Length = 469
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|62897017|dbj|BAD96449.1| tripartite motif protein 31 isoform alpha variant [Homo sapiens]
Length = 425
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|42561762|ref|NP_172162.3| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|302595925|sp|Q9M9Y4.2|DRIP1_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP1; AltName:
Full=DREB2A-interacting protein 1
gi|332189912|gb|AEE28033.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 421
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS 92
I V ++ + L C IC ++L+ T ECLH FC CI + E CP C L S
Sbjct: 3 IKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGS 62
Query: 93 K--RSLRADPNFDLLISKIYP-SRDEYEAHQVRVLEKLNKSHSQAALVQS 139
LR D N L +KI+ R + +A + L K S ++LV S
Sbjct: 63 TPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVSLPGKRKERSISSLVVS 112
>gi|62865604|ref|NP_008959.3| E3 ubiquitin-protein ligase TRIM31 [Homo sapiens]
gi|68068082|sp|Q9BZY9.2|TRI31_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|86197929|dbj|BAE78603.1| tripartite motif-containing 31 [Homo sapiens]
gi|123231709|emb|CAM26290.1| tripartite motif-containing 31 [Homo sapiens]
gi|158261563|dbj|BAF82959.1| unnamed protein product [Homo sapiens]
gi|261859140|dbj|BAI46092.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|417409780|gb|JAA51381.1| Putative locus-specific chromosome binding protein, partial
[Desmodus rotundus]
Length = 332
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 6 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 55
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 56 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 107
>gi|302633366|gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
Length = 677
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ + L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L +
Sbjct: 40 LEIGAPDLDKDLLCPICMQVIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNN 97
Query: 94 RSLRADPNFDL 104
+ PNF L
Sbjct: 98 QLY---PNFLL 105
>gi|311259098|ref|XP_003127930.1| PREDICTED: E3 ubiquitin-protein ligase RNF138-like isoform 1 [Sus
scrofa]
gi|410977516|ref|XP_003995151.1| PREDICTED: E3 ubiquitin-protein ligase RNF138 isoform 1 [Felis
catus]
Length = 245
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|148664543|gb|EDK96959.1| ring finger protein 138, isoform CRA_c [Mus musculus]
Length = 279
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 74 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT- 132
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 133 -RRERACPERALDLENI 148
>gi|363746044|ref|XP_003643507.1| PREDICTED: polycomb group RING finger protein 1-like, partial
[Gallus gallus]
Length = 249
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A++ E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C
Sbjct: 16 AVSLQEEVKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPMC 74
Query: 87 RKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
K+ + +L+ D ++ K+ P E E ++R
Sbjct: 75 NTKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEEKRIR 113
>gi|148676158|gb|EDL08105.1| mCG9550, isoform CRA_b [Mus musculus]
Length = 334
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 10 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 59
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 60 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 111
>gi|84000321|ref|NP_001033263.1| E3 ubiquitin-protein ligase RNF138 [Bos taurus]
gi|118573795|sp|Q32LN5.1|RN138_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF138; AltName:
Full=RING finger protein 138
gi|81673702|gb|AAI09498.1| Ring finger protein 138 [Bos taurus]
gi|296473868|tpg|DAA15983.1| TPA: ring finger protein 138 [Bos taurus]
Length = 245
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|332656170|gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
Length = 677
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ + L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L +
Sbjct: 40 LEIGAPDLDKDLLCPICMQVIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNN 97
Query: 94 RSLRADPNFDL 104
+ PNF L
Sbjct: 98 QLY---PNFLL 105
>gi|194227110|ref|XP_001496144.2| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Equus
caballus]
Length = 469
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|119623664|gb|EAX03259.1| tripartite motif-containing 31, isoform CRA_c [Homo sapiens]
Length = 425
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|16877522|gb|AAH17017.1| Tripartite motif-containing 31 [Homo sapiens]
gi|30582189|gb|AAP35321.1| tripartite motif-containing 31 [Homo sapiens]
gi|61360717|gb|AAX41911.1| tripartite motif-containing 31 [synthetic construct]
gi|61360720|gb|AAX41912.1| tripartite motif-containing 31 [synthetic construct]
gi|123995881|gb|ABM85542.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|323276616|ref|NP_001190991.1| COMMD3-BMI1 read-through protein [Homo sapiens]
Length = 469
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|350589578|ref|XP_003130828.2| PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]
Length = 469
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 19 ELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
E++RT + IT+ L+ LMC +C T ECLH FC CI+ L +
Sbjct: 143 EMHRTTRIKITE----------LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET 192
Query: 79 GNKECPTCRKKLVSKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
+K CP C ++ R L R+D ++ K+ P RD Y AH
Sbjct: 193 -SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|326523247|dbj|BAJ88664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKL 90
+ V +L L CP+C +L+ T ECLH FC CI +KE CPTC L
Sbjct: 31 VMVKRAALVERLTCPLCRRLLRDAATITECLHTFCRKCISKEFI--DKEICYCPTCNIDL 88
Query: 91 --VSKRSLRADPNFDLLISKIYPSR 113
+ LR D + + SKI+PS+
Sbjct: 89 GCAPEEKLRVDHSLQYVRSKIFPSK 113
>gi|301778747|ref|XP_002924789.1| PREDICTED: e3 ubiquitin-protein ligase RNF138-like [Ailuropoda
melanoleuca]
Length = 245
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|125604082|gb|EAZ43407.1| hypothetical protein OsJ_28012 [Oryza sativa Japonica Group]
Length = 314
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A T T V+P+ CP+CL+ L K TT C H FC CI L++ K+CPTC
Sbjct: 238 AQTSTTHAKVAPKE--PTFTCPVCLNKLDKPSTT-NCGHIFCEKCIQAWLKA-QKKCPTC 293
Query: 87 RKKL 90
RK L
Sbjct: 294 RKSL 297
>gi|440799569|gb|ELR20613.1| zinc finger, domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 326
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 28 ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
I D I R L L+C +C+ +L+ T +ECLH FC C+ ++ +CP C
Sbjct: 89 ILDGRNIIFKTRLLSGFLVCQLCMGVLRDAHTIRECLHTFCKSCLYKYFQT-TADCPLCG 147
Query: 88 KKLVSK--RSLRADPNFDLLISKIY 110
L +R D +++KI+
Sbjct: 148 VDLRPNPFERIRFDRTVQTIVNKIF 172
>gi|340718230|ref|XP_003397574.1| PREDICTED: hypothetical protein LOC100649216 [Bombus terrestris]
Length = 1792
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
++A R++ L C ICL + + + T C HRFC CI T L+S N CP C + +
Sbjct: 11 KLAEEIRNIQKCLQCTICLQTISEPVKTL-CGHRFCRQCIQTLLQSKNALCPLC-NRAIQ 68
Query: 93 KRSLRADPNFDLLISKI 109
+RS+ D + L I +
Sbjct: 69 RRSISKDEHMILYIDGL 85
>gi|291394254|ref|XP_002713536.1| PREDICTED: ring finger protein 138 isoform 1 [Oryctolagus
cuniculus]
Length = 245
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|449450966|ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ +++ T C H FC CIIT LR+ +CP C + L S + P
Sbjct: 45 LDKDFLCPICMQIIRDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCAQHLTSDQLF---P 99
Query: 101 NFDLLISKIYPSRDEYEAHQV 121
NF L+ K+ + AHQ+
Sbjct: 100 NF--LLDKLLK---KTSAHQI 115
>gi|30584893|gb|AAP36702.1| Homo sapiens tripartite motif-containing 31 [synthetic construct]
gi|61370435|gb|AAX43495.1| tripartite motif-containing 31 [synthetic construct]
Length = 426
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|327274703|ref|XP_003222116.1| PREDICTED: polycomb complex protein BMI-1-like [Anolis
carolinensis]
Length = 473
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC IC T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 162 LNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLET-SKYCPICDVQVHKTRPLLNIR 220
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 221 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 251
>gi|431907047|gb|ELK11165.1| Tripartite motif-containing protein 26 [Pteropus alecto]
Length = 566
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 20 LNRTPQEAITDNTEIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITAL 76
+NR P E T +T +P RSL E+ C ICLD L+ +T +C H FC C + +
Sbjct: 15 VNREPSELRTKDTMATSAPLRSLEEEVTCSICLDYLRDPVTI-DCGHVFCRSCTTDVRPV 73
Query: 77 RSGNKECPTCRK 88
G CP C+K
Sbjct: 74 SGGRPVCPLCKK 85
>gi|301118270|ref|XP_002906863.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108212|gb|EEY66264.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 830
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
R L + C +C D K + +K C H FC +CI L+S N++CPTC+K
Sbjct: 769 RDLQKLVNCSVCQDRRKDVLISK-CSHMFCKECIENNLKSRNRKCPTCKK 817
>gi|50550381|ref|XP_502663.1| YALI0D10615p [Yarrowia lipolytica]
gi|49648531|emb|CAG80851.1| YALI0D10615p [Yarrowia lipolytica CLIB122]
Length = 254
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 30 DNTEIAVSPRSLHS---ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK----- 81
D +++ P HS E+ CPICL+ + T EC H +C DC+ AL SG +
Sbjct: 123 DGLDLSAPPPDQHSKLREVKCPICLEPPDRLCVT-ECGHLYCGDCVFKALSSGVRASDSV 181
Query: 82 -ECPTCRKKLVSK 93
EC CRK +V K
Sbjct: 182 GECSICRKSVVYK 194
>gi|260809325|ref|XP_002599456.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
gi|229284735|gb|EEN55468.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
Length = 280
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC IC T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVICGGYFIDATTIIECLHSFCKTCIVKYLDT-SKYCPVCDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS 112
AD L+ K+ P+
Sbjct: 71 ADKTLQSLVYKLVPN 85
>gi|291394256|ref|XP_002713537.1| PREDICTED: ring finger protein 138 isoform 2 [Oryctolagus
cuniculus]
Length = 209
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|189240385|ref|XP_001807192.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 690
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
C C ++L +TTK CLH C DC+I S CPTCR L SLR + N
Sbjct: 619 FTCVCCHEILHMPVTTK-CLHNICHDCLINCFASDIHFCPTCRTDLEKSCSLRINDNLQA 677
Query: 105 LISKIYPS 112
+ ++P
Sbjct: 678 ALKLLFPG 685
>gi|66822495|ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|66822589|ref|XP_644649.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472704|gb|EAL70654.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472772|gb|EAL70722.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
Length = 552
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
L CPIC + K ++T C H FCSDCI+ AL+ K CP C KL K+
Sbjct: 498 LECPICFEDTKPYVSTL-CGHIFCSDCIVNALKK-KKSCPVCNAKLHGKK 545
>gi|449275108|gb|EMC84081.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 353
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS-KRSLRADPNFDLL 105
CPICLD ++ CLH+FC CI+ +S ECP C++++ S S++ D +F L
Sbjct: 82 CPICLDSWEEASYVMPCLHQFCYTCILRWAQS-KPECPLCKRRIHSIIHSVQGDDDFQEL 140
Query: 106 I 106
+
Sbjct: 141 V 141
>gi|426352202|ref|XP_004043605.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Gorilla gorilla
gorilla]
Length = 474
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLWNLVEKI 78
>gi|328721663|ref|XP_001942972.2| PREDICTED: hypothetical protein LOC100162132 [Acyrthosiphon pisum]
Length = 985
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---S 95
+SL+ L+C +C T ECLH FC CI+ L + ++ CP C +L R S
Sbjct: 10 KSLNPHLVCVLCAGYYIDPTTIVECLHSFCRSCIVKYLET-SRFCPICDVQLHKTRPLLS 68
Query: 96 LRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRT 155
+R D + L+ KI P + E ++ L S ++ I L Q+ ++ T
Sbjct: 69 IRRDKILERLVYKIVPG--------LHAKEMARRALPNVELYLSPDDLISLVLQYHVEGT 120
Query: 156 KKNIQGNEEN 165
EEN
Sbjct: 121 SSQTMNVEEN 130
>gi|255073295|ref|XP_002500322.1| predicted protein [Micromonas sp. RCC299]
gi|226515584|gb|ACO61580.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKL 90
CPIC +M +T ECLH FC +CI+ ++ R N CPTC KL
Sbjct: 25 CPICGEMFTHPVTVMECLHTFCHECIVKSVQPGRGANNVCPTCGIKL 71
>gi|4586407|dbj|BAA76377.1| Trif-d [Mus musculus]
Length = 95
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|189441963|gb|AAI67291.1| ring finger protein 138 [Xenopus (Silurana) tropicalis]
Length = 222
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
E +CP+C ++L+ + T+ C H FC C + A++SG CP CR
Sbjct: 14 EYICPVCQEILQTPVRTQTCQHVFCRKCFLMAMKSGGANCPLCR 57
>gi|346472247|gb|AEO35968.1| hypothetical protein [Amblyomma maculatum]
Length = 263
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
PQE+++ E + ++L++ ++C IC L T ECLH FC C++ L N C
Sbjct: 5 PQESLSRQMERRIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNN-TC 63
Query: 84 PTC 86
PTC
Sbjct: 64 PTC 66
>gi|351700521|gb|EHB03440.1| E3 ubiquitin-protein ligase RNF138 [Heterocephalus glaber]
Length = 211
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 17 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVT--RRERACPERA 74
Query: 104 LLISKI 109
L + I
Sbjct: 75 LDLENI 80
>gi|440795518|gb|ELR16638.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 914
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
+L L CP+C D +K T+ T+ C H FC+ C+ + L+ N++CP C K
Sbjct: 845 TLRKMLRCPVCNDNMKDTVITR-CFHVFCNPCVKSRLQLRNRKCPGCAK 892
>gi|119623666|gb|EAX03261.1| tripartite motif-containing 31, isoform CRA_e [Homo sapiens]
Length = 349
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|217075410|gb|ACJ86065.1| unknown [Medicago truncatula]
gi|388494518|gb|AFK35325.1| unknown [Medicago truncatula]
Length = 242
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + + M+T+ C H FC CI A+ S +CPTCRKK+ K +R
Sbjct: 185 FTCPICMGPMVEEMSTR-CGHIFCKSCIKAAI-SAQAKCPTCRKKITVKELIRV 236
>gi|156547031|ref|XP_001601096.1| PREDICTED: hypothetical protein LOC100116657 [Nasonia vitripennis]
Length = 1468
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL--- 96
+L+ +L C +C T ECLH FC CI+ L S NK CP C ++ + L
Sbjct: 13 TLNEQLTCKLCGGYFIDATTIIECLHSFCKSCIVKYLES-NKFCPVCDAQVHKNKPLSNI 71
Query: 97 RADPNFDLLISKIYP 111
R D ++ K+ P
Sbjct: 72 RPDQTLQDIVYKLVP 86
>gi|431896258|gb|ELK05674.1| E3 ubiquitin-protein ligase RNF138 [Pteropus alecto]
Length = 245
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTSACQHVFCRKCFLTAMRESGIHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|50545591|ref|XP_500334.1| YALI0B00110p [Yarrowia lipolytica]
gi|49646200|emb|CAG82548.1| YALI0B00110p [Yarrowia lipolytica CLIB122]
Length = 176
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK------ECPTCRKKL 90
EL CPICLD K + C H +C DCI TAL SG + EC CRKK+
Sbjct: 63 ELKCPICLDP-PKVLCVTPCGHIYCGDCIYTALSSGVRATQLKGECSICRKKV 114
>gi|399216056|emb|CCF72744.1| unnamed protein product [Babesia microti strain RI]
Length = 428
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
++ + L + L C +C + T K CLH FC CIIT ++CP C + +
Sbjct: 173 VDVKFRLKILFNHLTCKLCKGLFFNAYTIKNCLHTFCKSCIITYAILVGQQCPVCHQNIN 232
Query: 92 S--KRSLRADPNFDLLISKIYP 111
+ + S+ D ++ K++P
Sbjct: 233 TNLEESIEYDNCIQSMVDKLFP 254
>gi|315047618|ref|XP_003173184.1| RING-14 protein [Arthroderma gypseum CBS 118893]
gi|311343570|gb|EFR02773.1| RING-14 protein [Arthroderma gypseum CBS 118893]
Length = 452
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 6 QSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLH 65
+S T++ LS+ L+RT +AI++ + V P+ + +CP+C + K + K C H
Sbjct: 321 RSAFTRTGPLSVNSLSRTVCQAISEQI-LVVVPQL--DDYLCPVCFTISFKPVRLK-CAH 376
Query: 66 RFCSDCIITALRSGNKECPTCRKKLV 91
FC C++ R+ CP CR ++V
Sbjct: 377 VFCIRCLVVMQRAQQNHCPMCRAEVV 402
>gi|217070974|gb|ACJ83847.1| unknown [Medicago truncatula]
Length = 247
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + + M+T+ C H FC CI A+ S +CPTCRKK+ K +R
Sbjct: 190 FTCPICMGPMVEEMSTR-CGHIFCKSCIKAAI-SAQAKCPTCRKKITVKELIRV 241
>gi|426232087|ref|XP_004010067.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform 1 [Ovis aries]
Length = 190
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 17/74 (22%)
Query: 37 SPRSLHSE----------LMCPICLDML------KKTMTTKECLHRFCSDCIITALRSGN 80
SPRS E + CPIC+D + + + EC H FCS C+ +L+S N
Sbjct: 112 SPRSAREEAAAGFRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKSAN 171
Query: 81 KECPTCRKKLVSKR 94
CPTCRKK+ KR
Sbjct: 172 T-CPTCRKKMSHKR 184
>gi|46488941|ref|NP_997506.1| E3 ubiquitin-protein ligase RNF138 isoform 1 [Mus musculus]
gi|81916761|sp|Q9CQE0.1|RN138_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF138; AltName:
Full=RING finger protein 138
gi|12835350|dbj|BAB23232.1| unnamed protein product [Mus musculus]
gi|12845969|dbj|BAB26977.1| unnamed protein product [Mus musculus]
gi|148664541|gb|EDK96957.1| ring finger protein 138, isoform CRA_a [Mus musculus]
Length = 245
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|432945013|ref|XP_004083483.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Oryzias latipes]
Length = 527
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
E +T TE+ L +EL C IC ++ + +T C H FCS CI T R +ECP
Sbjct: 362 EVVTQMTEV------LENELQCIICSELFIEAVTLN-CAHSFCSYCI-TQWRKKKEECPI 413
Query: 86 CRKKLVSKRSLRADPNF 102
CR+ + S+ A NF
Sbjct: 414 CRQAITSQSRCLALDNF 430
>gi|363743503|ref|XP_003642857.1| PREDICTED: polycomb group RING finger protein 2-like [Gallus
gallus]
Length = 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDAATIVECLHSFCKTCIVRYLEA-NKYCPMCDAQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQV 121
+D ++ K+ P R+ Y A+ V
Sbjct: 71 SDRTLQDVVYKLVPGLFTDEMKRRREFYAAYPV 103
>gi|343962543|dbj|BAK62859.1| polycomb group RING finger protein 4 [Pan troglodytes]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVRVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|21425584|emb|CAD33944.1| BMI1-like protein [Mus musculus]
gi|187955404|gb|AAI47683.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
gi|187956799|gb|AAI47696.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
Length = 194
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRSLRADPN 101
+ C IC L T ECLH FC CI+ N+ CP C + ++LR DP
Sbjct: 83 ISCFICKGYLIDAATITECLHSFCKSCIVKHFEHSNR-CPKCNLIVHQAKPHKNLRMDPQ 141
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNKSH 131
++ K+ +E E Q R + NK H
Sbjct: 142 LQSIVYKLVAGLEENEKKQRR---EFNKEH 168
>gi|168013805|ref|XP_001759457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689387|gb|EDQ75759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 668
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 27 AITDNTEIAVSPRS-LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
++ + E AV R+ + + +CPICL +K T+ C H FC CI+T L++ N CP
Sbjct: 13 SVEEKYESAVRARANMDRDFLCPICLHTMKDAFLTR-CGHNFCYSCIMTHLKNRNN-CPC 70
Query: 86 CRKKLVSKRSLRADPNFDLLISKI 109
C + L + PNF L++K+
Sbjct: 71 CAQYLTIDLLM---PNF--LLTKL 89
>gi|320170327|gb|EFW47226.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 413
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L CPIC +L T T C HR+C CI L CP C +L L+ D
Sbjct: 2 LLEHFTCPICCSLLSNTTITIPCGHRYCKSCIDECLNR-KSVCPCCNTRLNGGVVLQRDH 60
Query: 101 NFDLLISKIYPSRDEYE-AHQVRVLE 125
+D L+ I R + AH VR++E
Sbjct: 61 QYDALLEMIQKERKAADAAHLVRLVE 86
>gi|350409751|ref|XP_003488833.1| PREDICTED: hypothetical protein LOC100740095 [Bombus impatiens]
Length = 1794
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
+E ++A R++ L C ICL+ + + + T C HRFC CI T L++ N CP
Sbjct: 3 KEVFITAEKLAEEIRNIQKCLQCTICLNTISEPVKTL-CGHRFCRQCIQTLLQNKNALCP 61
Query: 85 TCRKKLVSKRSLRADPNFDLLISKI 109
C + + +RS+ D + L I +
Sbjct: 62 LC-NRAIQRRSISKDEHMILYIDGL 85
>gi|395132461|ref|NP_001016429.2| ring finger protein 138 [Xenopus (Silurana) tropicalis]
Length = 222
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
E +CP+C ++L+ + T+ C H FC C + A++SG CP CR
Sbjct: 14 EYICPVCQEILQTPVRTQTCQHVFCRKCFLMAMKSGGAYCPLCR 57
>gi|302760615|ref|XP_002963730.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
gi|300168998|gb|EFJ35601.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
Length = 378
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL-- 90
+ V+ L + L CP+C +L + T ECLH FC +CI L + + CP C L
Sbjct: 4 VKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLGV 63
Query: 91 VSKRSLRADPNFDLLISKIY 110
LR DP D L +K++
Sbjct: 64 APLEKLRPDPQLDELRNKLF 83
>gi|74192928|dbj|BAE34970.1| unnamed protein product [Mus musculus]
Length = 194
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 8 GTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTK 61
G S + +Y TP+ D A PR + CPIC+D + + +
Sbjct: 101 GEELSRDKDVYVTTHTPRSTKDDG---ATGPRP-SGTVSCPICMDGYSEIVQNGRLIVST 156
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 ECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>gi|344257166|gb|EGW13270.1| E3 ubiquitin-protein ligase TRIM31 [Cricetulus griseus]
Length = 384
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG-NKECPTCRKKLVSKRSLRAD 99
L E+ CPICL++L+ +T +C H FC CII ++ N +CP C K VSK + R +
Sbjct: 5 LQEEVTCPICLEILQNPVTI-DCGHNFCQQCIIQVGKTTENLQCPLC-KVTVSKDTFRPN 62
Query: 100 PNFDLL---ISKIYPSRDEYEAHQVRVLEKLNKSH 131
L I + P+ + E + R L+ K H
Sbjct: 63 KQLASLAETIRSMDPTEFQPEGEEKRCLKHKEKFH 97
>gi|119623662|gb|EAX03257.1| tripartite motif-containing 31, isoform CRA_a [Homo sapiens]
Length = 267
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|297829270|ref|XP_002882517.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328357|gb|EFH58776.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
AV+P + CPICL + ++TK C H FC CI AL S +CPTCRKK+ +K
Sbjct: 114 AVAPPVEEPKFNCPICLCPFTEEVSTK-CGHIFCKACIKNAL-SLQAKCPTCRKKITAKD 171
Query: 95 SLR 97
+R
Sbjct: 172 LIR 174
>gi|74211363|dbj|BAE26436.1| unnamed protein product [Mus musculus]
Length = 324
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKNRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|344249173|gb|EGW05277.1| Polycomb group RING finger protein 2 [Cricetulus griseus]
Length = 398
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 41 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 99
Query: 98 ADPNFDLLISKIYPS 112
+D ++ K+ P
Sbjct: 100 SDKTLQDIVYKLVPG 114
>gi|110742039|dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
Length = 391
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + P
Sbjct: 46 LDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQLY---P 100
Query: 101 NFDL 104
NF L
Sbjct: 101 NFLL 104
>gi|66806049|ref|XP_636746.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
gi|60465153|gb|EAL63252.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
Length = 970
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L+CP+C DM+K+ +K C H FC CII L S +K CP C L ++ PNF L
Sbjct: 154 LLCPVCNDMIKEPFISK-CGHSFCYQCIIIHL-SKSKTCPICMVYLTREQIF---PNFAL 208
>gi|46488939|ref|NP_062680.2| E3 ubiquitin-protein ligase RNF138 isoform 2 [Mus musculus]
gi|4586405|dbj|BAA76376.1| Trif [Mus musculus]
gi|13277604|gb|AAH03712.1| Ring finger protein 138 [Mus musculus]
gi|74193828|dbj|BAE22840.1| unnamed protein product [Mus musculus]
Length = 209
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|56119143|ref|NP_001007989.1| polycomb complex protein BMI-1 [Gallus gallus]
gi|82196525|sp|Q5SDR3.1|BMI1_CHICK RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|52078091|gb|AAU25821.1| BMI1 [Gallus gallus]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|169601474|ref|XP_001794159.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
gi|111067687|gb|EAT88807.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
Length = 986
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
CPICLD LK+ + TK C H FC+ CI + K+CP CR +L S S P
Sbjct: 703 CPICLDTLKEPVITK-CAHTFCTACIERVIEV-QKKCPMCRAELESLSSTTVKP 754
>gi|413933115|gb|AFW67666.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS--KRSLR 97
L + + CP+C +L++ CLH FC DCI+ + + + CP C L + LR
Sbjct: 15 LAACMTCPLCRGLLREATAVALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLR 74
Query: 98 ADPNFDLLISKIYP 111
D N + +K++P
Sbjct: 75 PDHNLQDIRNKVFP 88
>gi|395539960|ref|XP_003771930.1| PREDICTED: uncharacterized protein LOC100928474 [Sarcophilus
harrisii]
Length = 802
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 488 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 546
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 547 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 577
>gi|357493175|ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
gi|355518211|gb|AES99834.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
Length = 761
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A DN IA + L + +CPIC+ ++K T C H FC CIIT LR+ +CP C
Sbjct: 33 AGGDNFPIA-TMTELDKDFLCPICMQIIKDAFLT-SCGHSFCYMCIITHLRN-KSDCPCC 89
Query: 87 RKKLVSKRSLRADPNFDL 104
L + PNF L
Sbjct: 90 GHYLTNSNLF---PNFLL 104
>gi|354490629|ref|XP_003507459.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 1 [Cricetulus
griseus]
Length = 500
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG-NKECPTCRKKLVSKRSLRAD 99
L E+ CPICL++L+ +T +C H FC CII ++ N +CP C K VSK + R +
Sbjct: 5 LQEEVTCPICLEILQNPVTI-DCGHNFCQQCIIQVGKTTENLQCPLC-KVTVSKDTFRPN 62
Query: 100 PNFDLL---ISKIYPSRDEYEAHQVRVLEKLNKSH 131
L I + P+ + E + R L+ K H
Sbjct: 63 KQLASLAETIRSMDPTEFQPEGEEKRCLKHKEKFH 97
>gi|332245860|ref|XP_003272070.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Nomascus leucogenys]
Length = 475
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIEETSRGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLWNLVEKI 78
>gi|431919132|gb|ELK17884.1| 52 kDa Ro protein [Pteropus alecto]
Length = 471
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + ++ EC H FC +CI + G CP CRKK + R+ R +
Sbjct: 10 MWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVGKDGGNYCPVCRKKFLC-RNFRPNR 67
Query: 101 NFDLLISKI 109
L++ +
Sbjct: 68 QLANLVNNL 76
>gi|255587080|ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223525812|gb|EEF28255.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 677
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CIIT LR+ +CP C L + + P
Sbjct: 47 LEKDFLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCTHYLTTNQLF---P 101
Query: 101 NFDL 104
NF L
Sbjct: 102 NFLL 105
>gi|348576744|ref|XP_003474146.1| PREDICTED: E3 ubiquitin-protein ligase RNF138-like [Cavia
porcellus]
Length = 209
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|330797592|ref|XP_003286843.1| hypothetical protein DICPUDRAFT_77720 [Dictyostelium purpureum]
gi|325083145|gb|EGC36605.1| hypothetical protein DICPUDRAFT_77720 [Dictyostelium purpureum]
Length = 454
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
++ S L CPIC D TM TK C H +CS CI TAL S + CP+CR S + L +
Sbjct: 25 NMDSLLRCPICYDYFNTTMMTK-CSHNYCSLCIRTAL-SFKESCPSCRLDCNSTQLLN-N 81
Query: 100 PNFDLLI 106
+ DLL+
Sbjct: 82 RHLDLLV 88
>gi|148233054|ref|NP_001084862.1| E3 ubiquitin-protein ligase RNF8-B [Xenopus laevis]
gi|82202083|sp|Q6NRG0.1|RNF8B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF8-B; AltName:
Full=RING finger protein 8-B
gi|47123933|gb|AAH70792.1| Rnf8-b-prov protein [Xenopus laevis]
Length = 532
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS CI + R +ECP CR++++S+ RSL D
Sbjct: 371 LDNELQCIICSEHFIEAVTLN-CAHSFCSYCI-KSWRKRKEECPICRQEILSETRSLVLD 428
Query: 100 PNFDLLISKIYP 111
D ++ K+ P
Sbjct: 429 NCIDSMVDKLSP 440
>gi|328875233|gb|EGG23598.1| hypothetical protein DFA_05732 [Dictyostelium fasciculatum]
Length = 751
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
A +P+ + L CPICL ++K+ T+ C H FC CI+T + + CP C L +
Sbjct: 128 AATPKDIDDTLSCPICLQIIKEPFITR-CGHSFCYQCILTQI-TDKTSCPICLHYLTRDQ 185
Query: 95 SLRADPNFDL 104
PNF L
Sbjct: 186 IF---PNFAL 192
>gi|356557797|ref|XP_003547197.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
max]
Length = 985
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL+CPIC +L ++ C H FC+ C+ +++S + CP C+ ++R +R P+ D
Sbjct: 10 ELICPICWSLLDSAVSLT-CNHLFCNSCVFKSMKSASA-CPVCKIPF-TRREVRPAPHMD 66
Query: 104 LLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIK 145
L+S IY ++ A V + E +Q A V ++++G K
Sbjct: 67 NLVS-IY--KNMEAASGVNIFE------TQNAPVTNLSDGEK 99
>gi|351709698|gb|EHB12617.1| Polycomb complex protein BMI-1 [Heterocephalus glaber]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|344249026|gb|EGW05130.1| Polycomb complex protein BMI-1 [Cricetulus griseus]
Length = 324
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|225468779|ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246586 [Vitis vinifera]
Length = 209
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+ L M+TK C H FC CI A+ S +CPTCRK++ K ++R
Sbjct: 154 CPICMGQLVDEMSTK-CGHIFCKMCIKAAI-SAQGKCPTCRKRVTMKDTIR 202
>gi|157819305|ref|NP_001100838.1| BMI1 polycomb ring finger oncogene [Rattus norvegicus]
gi|149021165|gb|EDL78772.1| polycomb group ring finger 4 (predicted) [Rattus norvegicus]
gi|195540247|gb|AAI68209.1| Bmi1 protein [Rattus norvegicus]
Length = 324
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|20386036|gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyostelium discoideum]
Length = 577
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L CPIC + K ++T C H FCSDCI+ AL+ K CP C KL K +L
Sbjct: 510 LECPICFEDTKPYVSTL-CGHIFCSDCIVNALKK-KKSCPVCNAKLHGK---------NL 558
Query: 105 LISKIYPSRDEY 116
+I I+ + +Y
Sbjct: 559 IILFIFNNLAQY 570
>gi|432108191|gb|ELK33111.1| Polycomb complex protein BMI-1 [Myotis davidii]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|328871515|gb|EGG19885.1| MEK1 interacting protein 1 [Dictyostelium fasciculatum]
Length = 367
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 37 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
P+ ++ CPIC + ++K M++ C H FC+DCI AL + K CP C KL +K+
Sbjct: 305 GPKEKKKKISCPICFEKMEK-MSSTTCGHVFCTDCIQAAL-TRRKVCPVCSTKLTAKK 360
>gi|48145939|emb|CAG33192.1| COMMD3 [Homo sapiens]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|148705502|gb|EDL37449.1| mCG16337, isoform CRA_a [Mus musculus]
Length = 198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ D A PR + CPIC+D + + + EC H
Sbjct: 109 SRDKDVYVTTHTPRSTKDDG---ATGPRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 164
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 165 VFCSQCLRDSLKNANT-CPTCRKKINHKR 192
>gi|12275860|gb|AAG50165.1|AF230386_1 tripartite motif protein TRIM31 alpha [Homo sapiens]
Length = 425
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V + ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLC-KTSVRRDAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|84000133|ref|NP_001033161.1| polycomb complex protein BMI-1 [Bos taurus]
gi|122138672|sp|Q32KX7.1|BMI1_BOVIN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|81674800|gb|AAI09872.1| BMI1 polycomb ring finger oncogene [Bos taurus]
gi|296481449|tpg|DAA23564.1| TPA: polycomb complex protein BMI-1 [Bos taurus]
gi|440901143|gb|ELR52137.1| Polycomb complex protein BMI-1 [Bos grunniens mutus]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|291873|gb|AAA19873.1| putative [Homo sapiens]
gi|371929009|gb|AEX59150.1| polycomb ring finger protein [Sus scrofa]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|281344795|gb|EFB20379.1| hypothetical protein PANDA_014195 [Ailuropoda melanoleuca]
Length = 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR +
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGIHCPLCRGNVT- 62
Query: 93 KRSLRADPNFDLLISKI 109
R RA P L + I
Sbjct: 63 -RRERACPERALDLENI 78
>gi|149017050|gb|EDL76101.1| ring finger protein 138, isoform CRA_a [Rattus norvegicus]
Length = 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT--RRERACP 69
>gi|54695770|gb|AAV38257.1| B lymphoma Mo-MLV insertion region (mouse) [Homo sapiens]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|253746092|gb|EET01597.1| Hypothetical protein GL50581_1122 [Giardia intestinalis ATCC 50581]
Length = 2094
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
E +C ICL+ L+K + C+H FC+DCI K CP C ++
Sbjct: 114 EYICRICLEPLRKPLRFSHCMHAFCADCIYYLFSLWEKTCPICNER 159
>gi|195502128|ref|XP_002098087.1| GE10170 [Drosophila yakuba]
gi|194184188|gb|EDW97799.1| GE10170 [Drosophila yakuba]
Length = 344
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 47 CPICLD-MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CP+C+D + K+ + +C H FC +CI TA+ S +CP C KKL +++ R
Sbjct: 291 CPVCMDSVTKREPVSTKCGHVFCRECIQTAI-SATHKCPMCNKKLTARQFFR 341
>gi|27883842|ref|NP_005171.4| polycomb complex protein BMI-1 [Homo sapiens]
gi|197098134|ref|NP_001126098.1| polycomb complex protein BMI-1 [Pongo abelii]
gi|114692354|ref|XP_001136082.1| PREDICTED: polycomb complex protein BMI-1 isoform 2 [Pan
troglodytes]
gi|426364177|ref|XP_004049196.1| PREDICTED: polycomb complex protein BMI-1 [Gorilla gorilla gorilla]
gi|22258801|sp|P35226.2|BMI1_HUMAN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4; AltName:
Full=RING finger protein 51
gi|75061773|sp|Q5R8L2.1|BMI1_PONAB RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|15341688|gb|AAH11652.1| BMI1 polycomb ring finger oncogene [Homo sapiens]
gi|55730352|emb|CAH91898.1| hypothetical protein [Pongo abelii]
gi|60814344|gb|AAX36297.1| B lymphoma Mo-MLV insertion region [synthetic construct]
gi|119606554|gb|EAW86148.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606556|gb|EAW86150.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606557|gb|EAW86151.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606560|gb|EAW86154.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|189053794|dbj|BAG36046.1| unnamed protein product [Homo sapiens]
gi|208965886|dbj|BAG72957.1| BMI1 polycomb ring finger oncogene [synthetic construct]
gi|355782688|gb|EHH64609.1| Polycomb group RING finger protein 4 [Macaca fascicularis]
gi|431917704|gb|ELK16969.1| Polycomb complex protein BMI-1 [Pteropus alecto]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|54695768|gb|AAV38256.1| B lymphoma Mo-MLV insertion region (mouse) [synthetic construct]
gi|61366456|gb|AAX42862.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|417397767|gb|JAA45917.1| Putative e3 ubiquitin-protein ligase [Desmodus rotundus]
Length = 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGTVT--RRERACP 69
>gi|33859620|ref|NP_035408.1| E3 ubiquitin-protein ligase RNF4 [Mus musculus]
gi|18203402|sp|Q9QZS2.1|RNF4_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF4; AltName: Full=RING
finger protein 4
gi|6006817|gb|AAF00620.1|AF169300_1 ring finger protein 4 [Mus musculus]
gi|12859241|dbj|BAB31585.1| unnamed protein product [Mus musculus]
gi|13096975|gb|AAH03282.1| Ring finger protein 4 [Mus musculus]
gi|26354985|dbj|BAC41119.1| unnamed protein product [Mus musculus]
gi|74151023|dbj|BAE27641.1| unnamed protein product [Mus musculus]
gi|74185297|dbj|BAE30125.1| unnamed protein product [Mus musculus]
gi|74186546|dbj|BAE34757.1| unnamed protein product [Mus musculus]
gi|74204581|dbj|BAE35362.1| unnamed protein product [Mus musculus]
gi|74213377|dbj|BAE35505.1| unnamed protein product [Mus musculus]
Length = 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ D A PR + CPIC+D + + + EC H
Sbjct: 105 SRDKDVYVTTHTPRSTKDDG---ATGPRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 160
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 161 VFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>gi|302786086|ref|XP_002974814.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
gi|300157709|gb|EFJ24334.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
Length = 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL-- 90
+ V+ L + L CP+C +L + T ECLH FC +CI L + + CP C L
Sbjct: 4 VKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLGV 63
Query: 91 VSKRSLRADPNFDLLISKIY 110
LR DP D L +K++
Sbjct: 64 APLEKLRPDPQLDELRNKLF 83
>gi|46559391|ref|NP_031578.2| polycomb complex protein BMI-1 [Mus musculus]
gi|115066|sp|P25916.1|BMI1_MOUSE RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|192201|gb|AAA37299.1| zinc finger protein [Mus musculus]
gi|192203|gb|AAA37300.1| bmi-1 [Mus musculus]
gi|31565373|gb|AAH53708.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|38614119|gb|AAH56384.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|84872481|gb|ABC67286.1| PCGF4 [Mus musculus]
gi|148676156|gb|EDL08103.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676157|gb|EDL08104.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676159|gb|EDL08106.1| mCG9550, isoform CRA_a [Mus musculus]
Length = 324
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|354490631|ref|XP_003507460.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 2 [Cricetulus
griseus]
Length = 500
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG-NKECPTCRKKLVSKRSLRAD 99
L E+ CPICL++L+ +T +C H FC CII ++ N +CP C K VSK + R +
Sbjct: 5 LQEEVTCPICLEILQNPVTI-DCGHNFCQQCIIQVGKTTENLQCPLC-KVTVSKDTFRPN 62
Query: 100 PNFDLL---ISKIYPSRDEYEAHQVRVLEKLNKSH 131
L I + P+ + E + R L+ K H
Sbjct: 63 KQLASLAETIRSMDPTEFQPEGEEKRCLKHKEKFH 97
>gi|60654235|gb|AAX29810.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|393226463|gb|EJD34217.1| hypothetical protein AURDEDRAFT_176736 [Auricularia delicata
TFB-10046 SS5]
Length = 258
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
+L + EL +EA E+ L ++ C ICL+ L K +C H FC C++
Sbjct: 136 KLIIRELEAAKKEADDLKVELEEKMADLRKQVECEICLETLWKPWALSDCGHTFCQTCLV 195
Query: 74 TALRSGNKECPTCRKKLVSK 93
+ ECPTCR ++ +
Sbjct: 196 SLFDRQKFECPTCRARVTHR 215
>gi|73948737|ref|XP_858578.1| PREDICTED: polycomb complex protein BMI-1 isoform 3 [Canis lupus
familiaris]
gi|301754703|ref|XP_002913196.1| PREDICTED: polycomb complex protein BMI-1-like [Ailuropoda
melanoleuca]
gi|281350791|gb|EFB26375.1| hypothetical protein PANDA_000973 [Ailuropoda melanoleuca]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|68163489|ref|NP_001020133.1| polycomb complex protein BMI-1 [Felis catus]
gi|22256724|sp|Q9TST0.1|BMI1_FELCA RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|6012977|emb|CAB57313.1| Bmi-1 protein [Felis catus]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|241707385|ref|XP_002413296.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
gi|215507110|gb|EEC16604.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
Length = 1230
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
SL+S L CP+C L +T +CLH FC CI+ L +G+ CP C +L
Sbjct: 39 SLNSCLSCPLCRGYLVDAVTLVKCLHSFCKSCILKHLETGS-SCPVCELRL 88
>gi|224131692|ref|XP_002321154.1| predicted protein [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa]
Length = 672
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CI T LR+ N +CP C L + + P
Sbjct: 43 LEKDFLCPICMQIIKDAFLTV-CGHSFCYMCITTHLRNKN-DCPCCSHYLTTNQLF---P 97
Query: 101 NFDL 104
NF L
Sbjct: 98 NFLL 101
>gi|213982801|ref|NP_001135572.1| ring finger protein 8, E3 ubiquitin protein ligase [Xenopus
(Silurana) tropicalis]
gi|195539833|gb|AAI68076.1| Unknown (protein for MGC:185901) [Xenopus (Silurana) tropicalis]
Length = 342
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS CI + R +ECP CR++++S+ RSL D
Sbjct: 181 LDNELQCIICSEHFIEAVTLN-CAHSFCSYCI-KSWRKRKEECPICRQEILSETRSLVLD 238
Query: 100 PNFDLLISKIYP 111
D +++K+ P
Sbjct: 239 NCIDSMVAKLSP 250
>gi|344277626|ref|XP_003410601.1| PREDICTED: COMM domain-containing protein 3-like isoform 1
[Loxodonta africana]
Length = 469
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 155 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVHYLET-SKYCPICDVQVHKTRPLLNIR 213
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 214 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 244
>gi|26451887|dbj|BAC43036.1| putative RING finger protein [Arabidopsis thaliana]
gi|28372918|gb|AAO39941.1| At3g07200 [Arabidopsis thaliana]
Length = 182
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
AV+P + CPICL + ++TK C H FC CI AL S +CPTCRKK+ K
Sbjct: 115 AVAPPVEEPKFSCPICLCPFTQEVSTK-CGHIFCKKCIKNAL-SLQAKCPTCRKKITVKG 172
Query: 95 SLR 97
+R
Sbjct: 173 LIR 175
>gi|47223482|emb|CAF97969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ + L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-NKYCPICDVQVHKTKPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQVRVLEKLNKSHSQAA 135
+D ++ K+ P RD Y H V N+ + A
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGSNEDRGEVA 117
>gi|149412168|ref|XP_001511592.1| PREDICTED: polycomb complex protein BMI-1-like [Ornithorhynchus
anatinus]
Length = 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|148224664|ref|NP_001084523.1| polycomb group ring finger 2 [Xenopus laevis]
gi|46250310|gb|AAH68725.1| MGC81178 protein [Xenopus laevis]
Length = 317
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLEA-HKFCPMCDSQVHKGRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS--RDE 115
+D ++ K+ P RDE
Sbjct: 71 SDKTLQDIVYKLVPGLFRDE 90
>gi|432104724|gb|ELK31277.1| E3 ubiquitin-protein ligase TRIM21 [Myotis davidii]
Length = 529
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + ++ EC H FC +CI ++G CP CRK+ + K + R P
Sbjct: 69 MWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVAKAGGGTCPVCRKQFLLK-NFR--P 124
Query: 101 NFDL 104
N L
Sbjct: 125 NLQL 128
>gi|431890708|gb|ELK01587.1| Polycomb group RING finger protein 2 [Pteropus alecto]
Length = 144
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y A+
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAAY 101
>gi|343961883|dbj|BAK62529.1| tripartite motif-containing protein 31 [Pan troglodytes]
Length = 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C+ V K ++R
Sbjct: 38 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTS-VRKNAIRF 95
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 96 NSLLRNLVEKI 106
>gi|321456923|gb|EFX68020.1| hypothetical protein DAPPUDRAFT_330505 [Daphnia pulex]
Length = 690
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 20 LNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
+ R PQ + + R S+L+CP+CLDM+ + T C H FC CI+ +L
Sbjct: 94 VKRGPQSLLFGGVKDTYEDRD--SDLLCPVCLDMMSEPYVTT-CGHSFCHGCIVRSLELA 150
Query: 80 NKECPTCRKKL-VSKRSLRADPNFDL--LISK 108
+K CP C L S R+ PN L LI+K
Sbjct: 151 SK-CPKCSGPLDSSGRNPSVFPNVTLNALITK 181
>gi|390335217|ref|XP_003724093.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
gi|390369992|ref|XP_003731748.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
Length = 241
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 28 ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
++D +I + R L+ ++C +C T ECLH FC CI+ L++ +K CP C
Sbjct: 5 VSDIHDIKLKIRELNQHIVCILCAGYYIDATTVTECLHTFCKSCIVKYLQT-SKICPMCN 63
Query: 88 KKLVSKR---SLRADPNFDLLISKIYPSRDEYE 117
+K+ + +LR D ++ K+ P E E
Sbjct: 64 QKVHETQPVLNLRPDRTMQDVVLKLVPKLFEKE 96
>gi|357605553|gb|EHJ64673.1| hypothetical protein KGM_03185 [Danaus plexippus]
Length = 1461
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 31 NTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITA-LRSGNKECPTCRKK 89
N +A P ++ EL+C +C D+L + C + FC +CI A L S + ECP CR+K
Sbjct: 231 NAPVAPEP-TIPDELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREK 289
Query: 90 LVSKRSL 96
++ +L
Sbjct: 290 EIAPTTL 296
>gi|226532512|ref|NP_001151476.1| LOC100285109 [Zea mays]
gi|195647044|gb|ACG42990.1| protein binding protein [Zea mays]
Length = 464
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS--KRSLR 97
L + + CP+C +L++ CLH FC DCI+ + + + CP C L + LR
Sbjct: 15 LAACMTCPLCRGLLREATAIALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLR 74
Query: 98 ADPNFDLLISKIYP 111
D N + +K++P
Sbjct: 75 PDHNLQDIRNKVFP 88
>gi|414871833|tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 526
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI E CP C+ L LRAD +
Sbjct: 111 MTCPLCRRLLRDATTISECLHTFCRKCIYQKFDDEEVECCPVCKIDLGCTPTEKLRADHS 170
Query: 102 FDLLISKIYP-SRDEYEAHQV 121
+ SK++P R + A +V
Sbjct: 171 LQDVRSKLFPFKRKKINAEEV 191
>gi|302784943|ref|XP_002974243.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
gi|300157841|gb|EFJ24465.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
Length = 946
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL CPICL + ++ C H FC CI+T+L+ G CP C K ++R +R P D
Sbjct: 11 ELKCPICLSLFQQAAVL-SCTHCFCKPCILTSLK-GMPFCPVC-KVPATRREVRPSPKMD 67
Query: 104 LLISKIY 110
++ IY
Sbjct: 68 NVVG-IY 73
>gi|297689565|ref|XP_002822205.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pongo abelii]
Length = 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFMEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK 61
>gi|229366038|gb|ACQ57999.1| RING finger protein 4 [Anoplopoma fimbria]
Length = 208
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 5 EQSGTTKSWELSMYELNRTP---QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
E+ T +S+ +S E TP AI + + S RS + CP+CLD + + +
Sbjct: 105 ERVPTGESYVVSSDEDEDTPPVLNAAIMSSVQTNSSSRSTPVTISCPVCLDSYSEIVESG 164
Query: 62 E------CLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
C H FCS C+ AL+S + CPTCRK+L ++
Sbjct: 165 RLVVSTICGHVFCSQCLRDALKSSHT-CPTCRKRLTHRQ 202
>gi|354477523|ref|XP_003500969.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cricetulus
griseus]
Length = 812
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
++ +CPIC DM+++ TK C H FC CI +L N CP C
Sbjct: 212 NDFVCPICFDMIEEAYMTK-CGHSFCYKCIHQSLEDNNNRCPKC 254
>gi|327266646|ref|XP_003218115.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 37 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
S + L EL CPICL KK + C H FC C+ CP CR+K+
Sbjct: 6 SVKKLCEELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCREKV 59
>gi|194763709|ref|XP_001963975.1| GF20974 [Drosophila ananassae]
gi|190618900|gb|EDV34424.1| GF20974 [Drosophila ananassae]
Length = 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 20 LNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
LNR A +D + L ++ C IC+D LK+ M T C HRFC CI L++
Sbjct: 78 LNRNNHYAASDTSGDQEQDELLDAKYECAICIDWLKEPMLTS-CGHRFCHGCITDWLQNH 136
Query: 80 NKECPTCRKKLVSKRSLRADPNF 102
N+ CP K+L + + + D NF
Sbjct: 137 NQCCPLDNKRLSADQDIFPD-NF 158
>gi|15231414|ref|NP_187376.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|145331994|ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|6642645|gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana]
gi|332640992|gb|AEE74513.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332640993|gb|AEE74514.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 182
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
AV+P + CPICL + ++TK C H FC CI AL S +CPTCRKK+ K
Sbjct: 115 AVAPPVEEPKFSCPICLCPFTQEVSTK-CGHIFCKKCIKNAL-SLQAKCPTCRKKITVKD 172
Query: 95 SLR 97
+R
Sbjct: 173 LIR 175
>gi|73951777|ref|XP_853173.1| PREDICTED: E3 ubiquitin ligase RNF4 [Canis lupus familiaris]
Length = 190
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ AL++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDALKNANT-CPTCRKKINHKR 184
>gi|229366630|gb|ACQ58295.1| RING finger protein 4 [Anoplopoma fimbria]
Length = 208
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 5 EQSGTTKSWELSMYELNRTP---QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
E+ T +S+ +S E TP AI + + S RS + CP+CLD + + +
Sbjct: 105 ERVPTGESYVVSSDEDEDTPPVLNAAIMSSVQTNSSSRSTPVTISCPVCLDSYSEIVESG 164
Query: 62 E------CLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
C H FCS C+ AL+S + CPTCRK+L ++
Sbjct: 165 RLVVSTICGHVFCSQCLRDALKSSHT-CPTCRKRLTHRQ 202
>gi|53690156|gb|AAU89982.1| Sjogren syndrome antigen A1 [Homo sapiens]
Length = 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K
Sbjct: 13 EVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK 61
>gi|16758366|ref|NP_446040.1| E3 ubiquitin-protein ligase RNF138 [Rattus norvegicus]
gi|81903303|sp|Q99PD2.1|RN138_RAT RecName: Full=E3 ubiquitin-protein ligase RNF138; AltName:
Full=RING finger protein 138
gi|12964707|gb|AAK11282.1|AF315468_1 RSD-4 [Rattus norvegicus]
gi|38197568|gb|AAH61821.1| Ring finger protein 138 [Rattus norvegicus]
gi|149017051|gb|EDL76102.1| ring finger protein 138, isoform CRA_b [Rattus norvegicus]
Length = 209
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT--RRERACP 69
>gi|291190418|ref|NP_001167259.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
gi|223648922|gb|ACN11219.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
Length = 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
+E +T TE+ L +EL C IC ++ K +T C H FC CI + R ECP
Sbjct: 376 EEVVTQMTEV------LENELQCIICSELFIKAVTLN-CAHSFCLHCI-SEWRKRKDECP 427
Query: 85 TCRKKLVSKR-SLRADPNFDLLISKIYP 111
CR+ ++S+ SL D D ++ ++ P
Sbjct: 428 ICRQAILSQTCSLVLDNCIDRMVEQLTP 455
>gi|237840979|ref|XP_002369787.1| DNA repair protein, putative [Toxoplasma gondii ME49]
gi|211967451|gb|EEB02647.1| DNA repair protein, putative [Toxoplasma gondii ME49]
gi|221483703|gb|EEE22015.1| DNA repair protein, putative [Toxoplasma gondii GT1]
Length = 1733
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
CPICLD + + C H C C + LR ECP CR+K
Sbjct: 1253 CPICLDFPAEPVLLVSCCHTLCHSCAVNLLRRKRNECPICRRKF 1296
>gi|403286834|ref|XP_003934676.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Saimiri boliviensis
boliviensis]
Length = 190
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +LR+ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLRNANT-CPTCRKKINHKR 184
>gi|119623663|gb|EAX03258.1| tripartite motif-containing 31, isoform CRA_b [Homo sapiens]
Length = 267
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C+ V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTS-VRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|296197009|ref|XP_002746084.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Callithrix jacchus]
Length = 190
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +LR+ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLRNANT-CPTCRKKINHKR 184
>gi|74216801|dbj|BAE26531.1| unnamed protein product [Mus musculus]
Length = 202
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 17 MYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLHRFCSD 70
+Y TP+ D A PR + CPIC+D + + + EC H FCS
Sbjct: 110 VYVTTHTPRSTKDDG---ATGPRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQ 165
Query: 71 CIITALRSGNKECPTCRKKLVSKR 94
C+ +L++ N CPTCRKK+ KR
Sbjct: 166 CLRDSLKNANT-CPTCRKKINHKR 188
>gi|15208660|ref|NP_003132.2| E3 ubiquitin-protein ligase TRIM21 [Homo sapiens]
gi|114635781|ref|XP_508239.2| PREDICTED: E3 ubiquitin-protein ligase TRIM21 isoform 2 [Pan
troglodytes]
gi|133250|sp|P19474.1|RO52_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName:
Full=52 kDa Ro protein; AltName: Full=52 kDa
ribonucleoprotein autoantigen Ro/SS-A; AltName:
Full=RING finger protein 81; AltName: Full=Ro(SS-A);
AltName: Full=Sjoegren syndrome type A antigen;
Short=SS-A; AltName: Full=Tripartite motif-containing
protein 21
gi|337485|gb|AAA36581.1| 52-kD Ro/SSA ribonucleoprotein [Homo sapiens]
gi|665918|gb|AAB87094.1| 52 kda component of SS-A/Ro autoantigen [Homo sapiens]
gi|747927|gb|AAA79867.1| RO52 [Homo sapiens]
gi|14790039|gb|AAH10861.1| Tripartite motif-containing 21 [Homo sapiens]
gi|119589251|gb|EAW68845.1| tripartite motif-containing 21 [Homo sapiens]
gi|167773601|gb|ABZ92235.1| tripartite motif-containing 21 [synthetic construct]
gi|261858824|dbj|BAI45934.1| tripartite motif-containing 21 [synthetic construct]
gi|410219268|gb|JAA06853.1| tripartite motif containing 21 [Pan troglodytes]
gi|410257202|gb|JAA16568.1| tripartite motif containing 21 [Pan troglodytes]
gi|410295476|gb|JAA26338.1| tripartite motif containing 21 [Pan troglodytes]
gi|410341117|gb|JAA39505.1| tripartite motif containing 21 [Pan troglodytes]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK 61
>gi|397465878|ref|XP_003804705.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pan paniscus]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK 61
>gi|359483452|ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 29 TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
+ TE VS + +L+CPIC+ ++K T C H FC CI+T L + N +CP C
Sbjct: 48 VEATETGVS--EVDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIVTHLNNKN-DCPCCGH 103
Query: 89 KLVSKRSLRADPNFDL 104
L + PNF L
Sbjct: 104 FLTTNHLF---PNFLL 116
>gi|260823250|ref|XP_002604096.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
gi|229289421|gb|EEN60107.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
Length = 711
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT-ALRSGNKECPTCRKKL 90
R +H EL C ICL++ + C H FC DC+ A R G +CP CR+++
Sbjct: 10 REVHEELSCSICLELFTRPKVLP-CQHTFCQDCLCNLAGRGGTFQCPNCRQQV 61
>gi|392568745|gb|EIW61919.1| hypothetical protein TRAVEDRAFT_27359 [Trametes versicolor
FP-101664 SS1]
Length = 645
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L SEL C IC +L + +TT C H FC+ C+ +L N+ CP CR+KL +
Sbjct: 209 KELQSELTCEICFGLLWQPLTTP-CQHTFCTRCLFRSL-DHNQSCPLCRQKLPGYDYFQQ 266
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLE 125
P ++++ + + E A + +E
Sbjct: 267 HPCNRVILAILLKTFPEAYAERGATIE 293
>gi|393225670|gb|EJD33602.1| hypothetical protein AURDEDRAFT_177316 [Auricularia delicata
TFB-10046 SS5]
Length = 258
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
+L + EL +EA E+ L ++ C ICL+ L K +C H FC C++
Sbjct: 136 KLIIRELEAAKKEADDLKVELEEKMADLRKQVECEICLETLWKPWALTDCGHTFCQTCLV 195
Query: 74 TALRSGNKECPTCRKKLVSK 93
+ ECPTCR ++ +
Sbjct: 196 SLFDRQKFECPTCRARVTHR 215
>gi|297266344|ref|XP_001105519.2| PREDICTED: polycomb group RING finger protein 1-like [Macaca
mulatta]
Length = 394
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
>gi|14994115|gb|AAK76432.1|AF391283_1 SSA1 [Homo sapiens]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK 61
>gi|391337288|ref|XP_003743002.1| PREDICTED: uncharacterized protein LOC100900541 [Metaseiulus
occidentalis]
Length = 1015
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL-RSGNKECPTCRKKLVSKR---SL 96
++ L CP+C T ECLH FC CII L ++ CP C+ +L + L
Sbjct: 9 VNDHLTCPLCHGYFVDATTIVECLHSFCRTCIIKHLSKNQFPFCPVCKFQLAGTKLHQYL 68
Query: 97 RADPNFDLLISKIYPS--RDEYE 117
R+D ++ K+ PS R+E +
Sbjct: 69 RSDSTLQDIVYKLVPSLFRNEMK 91
>gi|390346065|ref|XP_003726470.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNF 102
++ +CPIC +++++ T+ C H FC CI+ +L S N+ CP C V +++ + PNF
Sbjct: 42 NDFLCPICFEVIEEAHMTR-CGHSFCQRCILRSLESSNR-CPKC--NFVIEKTDQIFPNF 97
Query: 103 DL 104
L
Sbjct: 98 AL 99
>gi|340369220|ref|XP_003383146.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Amphimedon queenslandica]
Length = 150
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR---SGNK-ECPTCRKKLVSKR 94
RS+ L CPICL+ LK T +CLH+FC +CI T + + NK +CP C+++ + KR
Sbjct: 25 RSIRQTLQCPICLEQLKNPCLT-QCLHQFCRECIQTVISTTTAANKPKCPLCKEQ-ICKR 82
Query: 95 SLRADPNFDLLISKI 109
L + +IS +
Sbjct: 83 GLTDSSRMEEVISAM 97
>gi|291405919|ref|XP_002719174.1| PREDICTED: ring finger protein 110 [Oryctolagus cuniculus]
Length = 314
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + NK CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEA 118
+D ++ K+ P RD Y A
Sbjct: 71 SDKTLQDIVYKLVPGLFKDEMKRRRDFYAA 100
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +++CPIC+ ++K T C H FC CI T LR+ N +CP C L + P
Sbjct: 30 LDKDILCPICMQIIKDAFLTS-CGHSFCYLCITTHLRNKN-DCPCCSHYLTNNHIF---P 84
Query: 101 NFDL--LISKIYP 111
NF L L+ + Y
Sbjct: 85 NFLLNKLLERTYA 97
>gi|89273832|emb|CAJ81492.1| novel protein similar to ring finger protein 138 rnf138 [Xenopus
(Silurana) tropicalis]
Length = 222
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
E +CP+C ++ + + T+ C H FC C + A++SG CP CR
Sbjct: 14 EYICPVCQEIFQTPVRTQTCQHVFCRKCFLMAMKSGGANCPLCR 57
>gi|449494781|ref|XP_002196080.2| PREDICTED: E3 ubiquitin-protein ligase RNF138, partial
[Taeniopygia guttata]
Length = 257
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ CP+C ++ K + T C H FC C +TA+R CP CR + K
Sbjct: 25 DFYCPVCQEVFKTPVRTANCQHVFCRKCFLTAIRESGTHCPLCRGSVTKK 74
>gi|12275862|gb|AAG50166.1|AF230387_1 tripartite motif protein TRIM31 beta [Homo sapiens]
Length = 267
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V + ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLC-KTSVRRDAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|195120009|ref|XP_002004521.1| GI19568 [Drosophila mojavensis]
gi|193909589|gb|EDW08456.1| GI19568 [Drosophila mojavensis]
Length = 1552
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
++++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 219 AVNAHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERYCPRCEMVINNAKPNIKS 277
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 278 DTTLQAIVYKLVPGLYERELMRKRAFYK 305
>gi|292616338|ref|XP_002662988.1| PREDICTED: RING finger protein 166-like [Danio rerio]
Length = 241
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
SL S+ CPICL++ K ++ C H FC DC+ L+ + CP CR K+
Sbjct: 30 SLESQFSCPICLEVYHKPVSIASCAHTFCGDCLQPCLQVTSPLCPLCRMPFDPKK 84
>gi|195380025|ref|XP_002048771.1| GJ21143 [Drosophila virilis]
gi|194143568|gb|EDW59964.1| GJ21143 [Drosophila virilis]
Length = 1561
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
++++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 228 AVNAHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERYCPRCEMVINNAKPNIKS 286
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 287 DTTLQAIVYKLVPGLYERELMRKRAFYK 314
>gi|198436699|ref|XP_002130685.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 275
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN----KECPTCRKKL 90
RS +S+ CPICL + ++ T C H FC CIIT R GN +CP CR+ +
Sbjct: 97 RSFYSDQRCPICLQDARCSVETN-CGHLFCGQCIITYWRYGNWLGAVQCPVCRQMV 151
>gi|281205537|gb|EFA79727.1| hypothetical protein PPL_07418 [Polysphondylium pallidum PN500]
Length = 829
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L L CPICLD++K+ TK C H FC CI+ L S CP C L +
Sbjct: 156 KQLEDTLSCPICLDIIKEPFITK-CGHSFCYQCILVQL-SKQSSCPLCMHFLSRDQIF-- 211
Query: 99 DPNFDL 104
PNF L
Sbjct: 212 -PNFAL 216
>gi|221504276|gb|EEE29951.1| DNA repair protein, putative [Toxoplasma gondii VEG]
Length = 1301
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
CPICLD + + C H C C + LR ECP CR+K
Sbjct: 1014 CPICLDFPAEPVLLVSCCHTLCHSCAVNLLRRKRNECPICRRKF 1057
>gi|389739296|gb|EIM80490.1| hypothetical protein STEHIDRAFT_172730 [Stereum hirsutum FP-91666
SS1]
Length = 329
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN----KECPTCRKKL---VSKRS 95
S L+CPICLD LK + T C H C +C+ +R ECPTCR + S
Sbjct: 19 SLLVCPICLDDLKNAVATP-CGHVHCEECLKDYIRLSEDPHWAECPTCRARFSIVTPDPS 77
Query: 96 L---RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
L + P F + ++Y + E++Q R+ + HS
Sbjct: 78 LIEPKYRPFFSPPLRRVYVDSPQLESYQQRISALEERVHS 117
>gi|348512208|ref|XP_003443635.1| PREDICTED: polycomb complex protein BMI-1-like [Oreochromis
niloticus]
Length = 567
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ + L R
Sbjct: 241 LNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKPLLNIR 299
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQVRVLEKLNKSHSQAA 135
+D ++ K+ P RD Y H V N+ + A
Sbjct: 300 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGTNEDRGEVA 346
>gi|334348830|ref|XP_001367832.2| PREDICTED: polycomb complex protein BMI-1-like [Monodelphis
domestica]
Length = 589
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 275 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 333
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 334 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 364
>gi|242065788|ref|XP_002454183.1| hypothetical protein SORBIDRAFT_04g026250 [Sorghum bicolor]
gi|241934014|gb|EES07159.1| hypothetical protein SORBIDRAFT_04g026250 [Sorghum bicolor]
Length = 703
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 43 SELMCPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
S+ MC IC D +K + + T EC H F CI ++++ GN CP CR K
Sbjct: 78 SKRMCAICFDSMKPGHGQALFTAECSHMFHFHCISSSVKHGNHVCPVCRAKW-------K 130
Query: 99 DPNFDLLISKIYP-SRDEYEAHQVRV 123
+ F+ +S I P R +QVR+
Sbjct: 131 EIPFNRSLSSIVPRGRGGVNVNQVRL 156
>gi|449669298|ref|XP_002160965.2| PREDICTED: helicase-like transcription factor-like [Hydra
magnipapillata]
Length = 867
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
CP+CLD L + + T C H FC CI +R+ +CP CRK++ + + + N D
Sbjct: 650 CPVCLDSLNQPVIT-HCAHLFCKQCIEDVIRTDKPKCPLCRKEVTKDKLVEPEVNED 705
>gi|409047023|gb|EKM56502.1| hypothetical protein PHACADRAFT_253670 [Phanerochaete carnosa
HHB-10118-sp]
Length = 259
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 21 NRTPQEAITDNTEI----AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL 76
NR P E N E+ A P + CP+CL+ K+T T+ C H FC+ CI TAL
Sbjct: 175 NRQPTENQCVNGEVESPDAEKPPTSGLFFSCPLCLEAPKETSATR-CGHLFCTSCIRTAL 233
Query: 77 RSGNKECPTCRKKLVSKRSLR 97
S K CP CR+ V K+ R
Sbjct: 234 -SNKKMCPVCREFAVPKQLRR 253
>gi|296080870|emb|CBI18799.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+ L M+TK C H FC CI A+ S +CPTCRK++ K ++R
Sbjct: 108 CPICMGQLVDEMSTK-CGHIFCKMCIKAAI-SAQGKCPTCRKRVTMKDTIR 156
>gi|443693058|gb|ELT94511.1| hypothetical protein CAPTEDRAFT_227017 [Capitella teleta]
Length = 521
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+S L+C +C L T ECLH FC C++ L+ K CPTC ++ + L R
Sbjct: 12 LNSHLLCSLCSGYLIDATTIIECLHSFCKTCLVNHLQK-TKFCPTCEVQIHKTKPLENVR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEA 118
AD L+ K+ P RD Y+A
Sbjct: 71 ADKALQALVYKLVPGLLHRERQRRRDFYDA 100
>gi|427785535|gb|JAA58219.1| Putative e3 ubiquitin-ligase protein [Rhipicephalus pulchellus]
Length = 626
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
I+ S +S+ +CPIC D++++ T C H FC CI T L N+ CP C V +
Sbjct: 33 ISSSYEDRNSDFLCPICFDVIEEAHMT-PCGHTFCYKCITTGLEYSNR-CPKCN--FVIE 88
Query: 94 RSLRADPNFDL--LISK 108
+ + PNF L LI+K
Sbjct: 89 KKEQIYPNFLLNELITK 105
>gi|322791296|gb|EFZ15813.1| hypothetical protein SINV_04327 [Solenopsis invicta]
Length = 1427
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ +L+C +C T ECLH FC CI+ L + NK CP C ++ R L R
Sbjct: 15 LNEQLICKLCGGYFIDATTIIECLHSFCKSCIVKYLEN-NKYCPICDVQIHKSRPLLNIR 73
Query: 98 ADPNFDLLISKIYPS 112
D ++ K+ P
Sbjct: 74 PDRMLQDIVYKLVPG 88
>gi|388374|gb|AAB27059.1| flvi-2/bmi-1 [Homo sapiens]
Length = 289
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 1 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 59
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 60 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 90
>gi|221102693|ref|XP_002168887.1| PREDICTED: uncharacterized protein LOC100198958 [Hydra
magnipapillata]
Length = 373
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+H EL+C IC +L++ + + C H FCS CI T LR+ N CP CR + K + A P
Sbjct: 13 VHLELVCCICTCVLEEPVESP-CRHVFCSKCIRTWLRNQNS-CPQCRSTVHKKDLISALP 70
Query: 101 NFDLLISK--IYPSRDEYEAHQVRVLEKLNKSHS---QAALVQSINEGIKLQ 147
+ISK I+ + + +E+L +SH+ Q L+ +N G ++
Sbjct: 71 ALKNIISKQRIFCEFKDLGCPDIVPIEQL-ESHTLVCQYGLIACLNLGCNVK 121
>gi|71896207|ref|NP_001025573.1| polycomb group ring finger 2 [Xenopus (Silurana) tropicalis]
gi|60552364|gb|AAH91007.1| pcgf2 protein [Xenopus (Silurana) tropicalis]
Length = 317
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLEA-HKFCPMCDSQVHKGRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS--RDE 115
+D ++ K+ P RDE
Sbjct: 71 SDKTLQDIVYKLVPGLFRDE 90
>gi|403263231|ref|XP_003923950.1| PREDICTED: E3 ubiquitin-protein ligase RNF138-like, partial
[Saimiri boliviensis boliviensis]
Length = 130
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKMPVRTAACQHVFCRKCFLTAMRESGTHCPLCRGNVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LGLENI 78
>gi|148223942|ref|NP_001080384.1| E3 ubiquitin-protein ligase RNF8-A [Xenopus laevis]
gi|82209734|sp|Q7ZX20.1|RNF8A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF8-A; AltName:
Full=RING finger protein 8-A
gi|28279440|gb|AAH46256.1| Rnf8-prov protein [Xenopus laevis]
Length = 540
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS C I + + +ECP CR+++V++ RSL D
Sbjct: 376 LDNELQCIICSEHFIEAVTLN-CAHSFCSYC-IKSWKKRKEECPICRQEIVTETRSLVLD 433
Query: 100 PNFDLLISKIYP 111
D ++ K+ P
Sbjct: 434 NCIDSMVDKLSP 445
>gi|392597808|gb|EIW87130.1| hypothetical protein CONPUDRAFT_45428 [Coniophora puteana
RWD-64-598 SS2]
Length = 1136
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-----CPTCRKKLVSKRSL 96
CPICLD+++ C+HR C DCI++ L S ++ CPTC + + ++ L
Sbjct: 870 CPICLDIMESPTIIPSCMHRCCKDCILSYLASSAEKNEPTRCPTCLQGPIREQDL 924
>gi|356532219|ref|XP_003534671.1| PREDICTED: DNA repair protein RAD5-like [Glycine max]
Length = 206
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL 96
CPIC+ L + M+T+ C H FC +CI A+ S +CPTCRKK V+K SL
Sbjct: 151 CPICMSPLVEEMSTR-CGHIFCKNCIRAAI-SAQAKCPTCRKK-VTKNSL 197
>gi|224053707|ref|XP_002297939.1| predicted protein [Populus trichocarpa]
gi|222845197|gb|EEE82744.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+D L++ +TK C H FC +CI AL + K+CPTCR K +K R
Sbjct: 197 CPICMDELQEATSTK-CGHVFCKNCIKKAL-AVQKKCPTCRMKCRAKSIYR 245
>gi|444723991|gb|ELW64614.1| E3 ubiquitin-protein ligase RNF125 [Tupaia chinensis]
Length = 428
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 242 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGN-VT 300
Query: 93 KRSLRADP 100
+R RA P
Sbjct: 301 RRE-RACP 307
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 35 AVSPRSLH---------SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+V+PR+L + C +CL++L + + T+ C H FC CI T+L++ CP
Sbjct: 16 SVTPRALERRGDPELPVTSFDCSVCLEVLHQPVRTR-CGHVFCRSCIATSLKNNKWTCPY 74
Query: 86 CRKKLVSK 93
CR L S+
Sbjct: 75 CRASLPSE 82
>gi|109158140|pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 8 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 66
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 67 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 97
>gi|357115770|ref|XP_003559659.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 502
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI E CP C+ L LRAD +
Sbjct: 98 MTCPLCNRLLRDATTISECLHTFCRRCIYQKFNDEEVESCPVCKIDLGCTPVEKLRADHS 157
Query: 102 FDLLISKIYP-SRDEYEAHQV 121
+ SKI+P R + +A V
Sbjct: 158 LHDVRSKIFPFKRKKIKAEDV 178
>gi|194883476|ref|XP_001975827.1| GG22533 [Drosophila erecta]
gi|190659014|gb|EDV56227.1| GG22533 [Drosophila erecta]
Length = 1573
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 230 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 288
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 289 DTTLQAIVYKLVPGLYERELMRKRAFYK 316
>gi|390604440|gb|EIN13831.1| DNA repair protein RAD5 [Punctularia strigosozonata HHB-11173 SS5]
Length = 1154
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKE--CPTC 86
+ E CPICLD ++ M C+HR C DCI++ + R+ +E CP C
Sbjct: 885 IKGETECPICLDFVEAPMLIPSCMHRCCKDCIVSFIDGCRAKGEEGRCPIC 935
>gi|417408476|gb|JAA50788.1| Putative e3 ubiquitin ligase rnf4-like protein, partial [Desmodus
rotundus]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 45 LMCPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
+ CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 127 ISCPICMDGYSEIVQNGRVIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKMNHKR 181
>gi|307173961|gb|EFN64691.1| Polycomb complex protein BMI-1 [Camponotus floridanus]
Length = 1468
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ +L C +C T ECLH FC CI+ L + NK CP C ++ R L R
Sbjct: 15 LNEQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLEN-NKYCPICEVQVHKSRPLLNIR 73
Query: 98 ADPNFDLLISKIYPS 112
D ++ K+ P
Sbjct: 74 PDHTLQDIVYKLVPG 88
>gi|390346100|ref|XP_788216.3| PREDICTED: E3 ubiquitin-protein ligase RNF8-like
[Strongylocentrotus purpuratus]
Length = 646
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
+ +E C IC ++ + TT C H FC+ CI T + N ECP CR K S RS+ D
Sbjct: 485 MENEFQCSICSELFIQA-TTLNCSHSFCAYCIHTWFKRKN-ECPNCRVKTTSHSRSIVLD 542
Query: 100 PNFDLLISKIYPSRDEYEAHQVR 122
D +I K+ EA Q+R
Sbjct: 543 NYIDKMIEKLGD-----EAKQMR 560
>gi|195485148|ref|XP_002090969.1| GE13404 [Drosophila yakuba]
gi|194177070|gb|EDW90681.1| GE13404 [Drosophila yakuba]
Length = 1574
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 235 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 293
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 294 DTTLQAIVYKLVPGLYERELMRKRAFYK 321
>gi|7688065|emb|CAB89694.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 968
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CIIT LR+ +CP C L + P
Sbjct: 41 LDKDFLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNSNLF---P 95
Query: 101 NFDL 104
NF L
Sbjct: 96 NFLL 99
>gi|332650885|gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein [Triticum
aestivum]
Length = 252
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
CP+CL+ L + TTK C H FC++CI A++ K+CPTCRK L
Sbjct: 194 FTCPVCLNKLVEPSTTK-CGHIFCAECIKQAIQF-QKKCPTCRKAL 237
>gi|194898903|ref|XP_001979002.1| GG13065 [Drosophila erecta]
gi|190650705|gb|EDV47960.1| GG13065 [Drosophila erecta]
Length = 320
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 47 CPICLD-MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CP+C+D + K+ + +C H FC +CI TA+ S +CP C KKL +++ R
Sbjct: 267 CPVCMDSVTKREPVSTKCGHVFCRECIQTAI-SATHKCPMCNKKLTARQFFR 317
>gi|350537659|ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum]
gi|4090943|gb|AAC98912.1| COP1 homolog [Solanum lycopersicum]
Length = 677
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
V+ L EL+CPIC+ ++K T C H FC CI+T L + +CP C L + +
Sbjct: 40 VTEWELDRELLCPICMQIIKDAFLTA-CGHSFCYMCIVTHLHN-KSDCPCCSHYLTTSQL 97
Query: 96 LRADPNFDL 104
PNF L
Sbjct: 98 Y---PNFLL 103
>gi|8358|emb|CAA41965.1| posterior sex combs [Drosophila melanogaster]
Length = 1603
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 258 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 316
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 317 DTTLQAIVYKLVPGLYERELMRKRAFYK 344
>gi|24653251|ref|NP_523725.2| posterior sex combs [Drosophila melanogaster]
gi|76803812|sp|P35820.2|PSC_DROME RecName: Full=Polycomb group protein Psc; AltName: Full=Protein
posterior sex combs
gi|7303376|gb|AAF58434.1| posterior sex combs [Drosophila melanogaster]
gi|71043368|gb|AAZ20646.1| posterior sex combs [Drosophila melanogaster]
gi|269914199|gb|ACZ52619.1| MIP14548p [Drosophila melanogaster]
Length = 1601
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|406694144|gb|EKC97478.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 519
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
+L +EL CP+C L++ T C FC +CI T L + ECP C K+ S L+
Sbjct: 234 TLDAELTCPLCKKALREATRTPCCDTAFCEECIQTYLVDHDFECPQCESKITSLDKLQ-- 291
Query: 100 PNFDLLISKIYPSRDEYEAHQ 120
P+ DL RD +A+Q
Sbjct: 292 PDQDL--------RDRVQAYQ 304
>gi|297661171|ref|XP_002809149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 2 [Pongo
abelii]
Length = 461
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ I
Sbjct: 68 NSLLRNLVENI 78
>gi|226504618|ref|NP_001148048.1| protein binding protein [Zea mays]
gi|195615516|gb|ACG29588.1| protein binding protein [Zea mays]
Length = 696
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 43 SELMCPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
S+ MC IC D +K + + T EC H F CI ++++ GN CP CR K
Sbjct: 74 SKRMCAICFDSMKPGLGQALFTAECSHMFHFHCISSSVKHGNHVCPVCRAK 124
>gi|330796608|ref|XP_003286358.1| hypothetical protein DICPUDRAFT_77241 [Dictyostelium purpureum]
gi|325083709|gb|EGC37155.1| hypothetical protein DICPUDRAFT_77241 [Dictyostelium purpureum]
Length = 524
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 43 SELMCPICLDMLKKTMTTK-ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPN 101
SE +C IC + ++ + +C+H+FC +CI T S N+ CPTCR+ + S R R D N
Sbjct: 457 SENLCTICFNQVEAINSASIDCVHKFCFECI-TRWNSRNRSCPTCRQPITSIR--RDDQN 513
Query: 102 FDL 104
DL
Sbjct: 514 EDL 516
>gi|224050199|ref|XP_002197969.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Taeniopygia guttata]
Length = 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 47 CPICLDMLK------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D+ + + + +C H FCS C+ +LR+ N CPTCRKKL ++
Sbjct: 136 CPICMDVYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANS-CPTCRKKLTHRQ 188
>gi|18422940|ref|NP_568701.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30695512|ref|NP_851156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42573624|ref|NP_974908.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|23297683|gb|AAN13007.1| unknown protein [Arabidopsis thaliana]
gi|26451492|dbj|BAC42844.1| putative RING zinc finger [Arabidopsis thaliana]
gi|332008320|gb|AED95703.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332008321|gb|AED95704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332008322|gb|AED95705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 203
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQ-EAITD------NTEIAVSPRSLHSE--------- 44
M E GTT+ + R P E++ D N E+ +S R S+
Sbjct: 85 MVDVESGGTTRFPANISNKRRRIPSSESVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEP 144
Query: 45 -LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + M+TK C H FC CI A+ S +CPTCRKK+ +K +R
Sbjct: 145 KFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAI-SRQGKCPTCRKKVTAKELIRV 197
>gi|413937822|gb|AFW72373.1| putative RING zinc finger and VWF domain family protein [Zea mays]
Length = 696
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 43 SELMCPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
S+ MC IC D +K + + T EC H F CI ++++ GN CP CR K
Sbjct: 74 SKRMCAICFDSMKPGLGQALFTAECSHMFHFHCISSSVKHGNHVCPVCRAK 124
>gi|168015457|ref|XP_001760267.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens]
gi|162688647|gb|EDQ75023.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens]
Length = 1031
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRS-GNKECPTCRKKL 90
CPICL+ ++ + T C HR C DC+ + RS G CP CR+ L
Sbjct: 796 CPICLESMEDAVLTP-CAHRLCRDCLFASWRSYGGGPCPICRQTL 839
>gi|192455614|ref|NP_001122184.1| polycomb group RING finger protein 5-A [Danio rerio]
gi|306755928|sp|B3DK16.1|PCF5A_DANRE RecName: Full=Polycomb group RING finger protein 5-A
gi|190338518|gb|AAI63687.1| Zgc:194668 [Danio rerio]
gi|190338958|gb|AAI63702.1| Zgc:194668 [Danio rerio]
Length = 234
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK---RS 95
R + + C IC L K ECLH FC CI+ N ECP C ++
Sbjct: 10 RDFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESN-ECPECGIQVHETNPLEM 68
Query: 96 LRADPNFDLLISKIYPSRDEYEAHQ 120
LR D + +I K+ P E E HQ
Sbjct: 69 LRLDKTLEEIIFKLVPGLREKEEHQ 93
>gi|301598407|pdb|2XEU|A Chain A, Ring Domain
Length = 64
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDMLK------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 6 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 58
>gi|224131246|ref|XP_002328491.1| predicted protein [Populus trichocarpa]
gi|222838206|gb|EEE76571.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLR 97
L + + CP+C +LK+ T CLH FC CI L + CP C L + LR
Sbjct: 13 LEACMTCPLCNKLLKEATTIFSCLHTFCRKCIYEKLSDEEVDCCPVCNMNLGCLPVDKLR 72
Query: 98 ADPNFDLLISKIYP 111
AD N + +KI+P
Sbjct: 73 ADHNLQDIRAKIFP 86
>gi|351704068|gb|EHB06987.1| RING finger protein 4 [Heterocephalus glaber]
Length = 265
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 207 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKISHKR 259
>gi|326516306|dbj|BAJ92308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICLD+ + TT C H FC C+ A K CP CR+ + + RS +
Sbjct: 153 LREELSCAICLDICFQPSTTA-CGHSFCMQCLKHAASKCGKRCPKCRQLISNSRSCTINT 211
Query: 101 NFDLLISKIYPSRDEYEAHQ 120
I ++PS E EA +
Sbjct: 212 VLWNTIQLLFPS--EVEARK 229
>gi|224132232|ref|XP_002321288.1| predicted protein [Populus trichocarpa]
gi|222862061|gb|EEE99603.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPICL L + M+TK C H FC CI A++ K CPTCRK++ +K +R
Sbjct: 158 CPICLCPLVEEMSTK-CGHIFCKTCIADAIKRQAK-CPTCRKRVTNKELIRV 207
>gi|8574407|emb|CAB94800.1| COP1 regulatory protein [Pisum sativum]
Length = 970
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CIIT LR+ +CP C L + P
Sbjct: 41 LDKDFLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNSNLF---P 95
Query: 101 NFDL 104
NF L
Sbjct: 96 NFLL 99
>gi|395328876|gb|EJF61266.1| hypothetical protein DICSQDRAFT_180881 [Dichomitus squalens
LYAD-421 SS1]
Length = 837
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L SEL C IC + + +TT C H FC+ C+ +L N+ CP CR+KL +
Sbjct: 338 KELLSELTCEICFGLFWQPITTP-CQHTFCTRCLFRSL-DHNQTCPLCRQKLPGYDYFQQ 395
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLE 125
P ++++ I + E A + + +E
Sbjct: 396 HPCNKVILAIILRAFPEAYAERGQAVE 422
>gi|313232453|emb|CBY24121.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT--CRKKLV 91
+ VS + + L CPIC L ECLH FC C+I L+ +ECP CR+K++
Sbjct: 35 VGVSLSPISNLLACPICNGYLVNATAITECLHVFCRSCLIRKLQQ-TQECPLPHCREKVI 93
Query: 92 --SKRSLRADPNFDLLISKIYP 111
++ +LR D LI + P
Sbjct: 94 VSAEGALRYDRTLQDLIHLLVP 115
>gi|195426449|ref|XP_002061347.1| GK20868 [Drosophila willistoni]
gi|194157432|gb|EDW72333.1| GK20868 [Drosophila willistoni]
Length = 1574
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 235 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERYCPRCEMVINNAKPNIKS 293
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 294 DTTLQAIVYKLVPGLYERELMRKRAFYK 321
>gi|426367059|ref|XP_004050554.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Gorilla gorilla
gorilla]
Length = 475
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ E+ CPICLD + ++ EC H FC +CI + G CP CR + + K
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRHRFLLK 61
>gi|327277643|ref|XP_003223573.1| PREDICTED: e3 ubiquitin-protein ligase RNF138-like [Anolis
carolinensis]
Length = 266
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C D+ K + C H FC C + A++ G CP CR + K R + D
Sbjct: 57 DYYCPVCQDVFKTPVRISICQHVFCRKCFLMAMKEGGTHCPLCRGIVTRKEKARPNRALD 116
Query: 104 L 104
+
Sbjct: 117 I 117
>gi|15029364|gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
Length = 662
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+L+CPIC+ ++K T C H FC CIIT L S +CP C + L SK L PNF
Sbjct: 48 DLLCPICMQIVKDAFLTA-CGHSFCYMCIITHL-SNKSDCPCCAQSL-SKNQLF--PNFL 102
Query: 104 L 104
L
Sbjct: 103 L 103
>gi|74219666|dbj|BAE29600.1| unnamed protein product [Mus musculus]
Length = 462
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
+S + E+ C ICLD + + M+ EC H FC +CI ++G CP CR++ + R+
Sbjct: 1 MSLEKMWEEVTCSICLDPMVEPMSI-ECGHCFCKECIFEVGKNGGSSCPECRQQFLL-RN 58
Query: 96 LRADPN 101
LR PN
Sbjct: 59 LR--PN 62
>gi|325179777|emb|CCA14180.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 844
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
C +C D K + +K C H FC DCI + L++ N++CP+C+K
Sbjct: 791 CSVCQDRRKSVIISK-CYHMFCKDCIDSNLKARNRKCPSCKK 831
>gi|297672996|ref|XP_002814564.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform 1 [Pongo
abelii]
gi|297672998|ref|XP_002814565.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform 2 [Pongo
abelii]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGAAGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|7688063|emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 675
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CIIT LR+ +CP C L + P
Sbjct: 41 LDKDFLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNSNLF---P 95
Query: 101 NFDL 104
NF L
Sbjct: 96 NFLL 99
>gi|397483619|ref|XP_003812996.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Pan paniscus]
gi|397483621|ref|XP_003812997.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Pan paniscus]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|14714855|gb|AAH10580.1| Tripartite motif-containing 21 [Mus musculus]
gi|71060001|emb|CAJ18544.1| Trim21 [Mus musculus]
gi|148684663|gb|EDL16610.1| tripartite motif protein 21, isoform CRA_b [Mus musculus]
gi|148684664|gb|EDL16611.1| tripartite motif protein 21, isoform CRA_b [Mus musculus]
Length = 470
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
+S + E+ C ICLD + + M+ EC H FC +CI ++G CP CR++ + R+
Sbjct: 9 MSLEKMWEEVTCSICLDPMVEPMSI-ECGHCFCKECIFEVGKNGGSSCPECRQQFLL-RN 66
Query: 96 LRADPN 101
LR PN
Sbjct: 67 LR--PN 70
>gi|449280984|gb|EMC88188.1| E3 ubiquitin-protein ligase RNF138 [Columba livia]
Length = 248
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+ CP+C ++ K + T C H FC C +TA+R CP CR + K
Sbjct: 19 DFYCPVCQEVFKTPVRTANCQHVFCRKCFLTAIRESGTHCPLCRGSVTKK 68
>gi|127139140|ref|NP_033303.3| E3 ubiquitin-protein ligase TRIM21 [Mus musculus]
gi|127139524|ref|NP_001076021.1| E3 ubiquitin-protein ligase TRIM21 [Mus musculus]
gi|74220786|dbj|BAE31362.1| unnamed protein product [Mus musculus]
Length = 462
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
+S + E+ C ICLD + + M+ EC H FC +CI ++G CP CR++ + R+
Sbjct: 1 MSLEKMWEEVTCSICLDPMVEPMSI-ECGHCFCKECIFEVGKNGGSSCPECRQQFLL-RN 58
Query: 96 LRADPN 101
LR PN
Sbjct: 59 LR--PN 62
>gi|47207659|emb|CAF92282.1| unnamed protein product [Tetraodon nigroviridis]
Length = 473
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVS-KRSLRADPNF 102
CPICLD CLHRFC CI S NK ECP C++ S S+RA+ +F
Sbjct: 12 CPICLDRFNNLAYLDRCLHRFCFPCIQEW--SHNKAECPLCKQPFASILHSVRAEDDF 67
>gi|91084985|ref|XP_972531.1| PREDICTED: similar to B lymphoma Mo-MLV insertion region (mouse)
[Tribolium castaneum]
gi|270008538|gb|EFA04986.1| hypothetical protein TcasGA2_TC015065 [Tribolium castaneum]
Length = 328
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ L+C +C T ECLH FC CI+ L + NK CP C ++ + L R
Sbjct: 12 LNQHLICKLCKGYFVDATTIIECLHSFCRSCIVKYL-AANKYCPVCDVQVHKSKPLLNIR 70
Query: 98 ADPNFDLLISKIYP---------SRDEYEAH 119
D ++ K+ P RD Y+ H
Sbjct: 71 QDRTLQDIVYKLVPRLFQNEVQRRRDFYKTH 101
>gi|3024571|sp|Q62191.1|RO52_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName: Full=52
kDa Ro protein; AltName: Full=52 kDa ribonucleoprotein
autoantigen Ro/SS-A; AltName: Full=Ro(SS-A); AltName:
Full=Sjoegren syndrome type A antigen; Short=SS-A;
AltName: Full=Tripartite motif-containing protein 21
gi|625146|gb|AAB51154.1| Ro protein [Mus musculus]
Length = 470
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
+S + E+ C ICLD + + M+ EC H FC +CI ++G CP CR++ + R+
Sbjct: 9 MSLEKMWEEVTCSICLDPMVEPMSI-ECGHCFCKECIFEVGKNGGSSCPECRQQFLL-RN 66
Query: 96 LRADPN 101
LR PN
Sbjct: 67 LR--PN 70
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 31 NTEIAVSPRS------------LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
N EI V RS + EL CPICL + ++ C H FC+ CI+ +++
Sbjct: 570 NREIVVRDRSRSKMADTSHLERMGRELKCPICLSLYNSAVSL-SCNHVFCNACIVKSMKM 628
Query: 79 GNKECPTCRKKLVSKRSLRADPNFDLLISKIY 110
+ CP C K +R +R P+ D L+S IY
Sbjct: 629 -DATCPVC-KIPYHRREIRGAPHMDSLVS-IY 657
>gi|21954077|gb|AAK76707.2| unknown protein [Arabidopsis thaliana]
Length = 192
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQ-EAITD------NTEIAVSPRSLHSE--------- 44
M E GTT+ + R P E++ D N E+ +S R S+
Sbjct: 74 MVDVESGGTTRFPANISNKRRRIPSSESVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEP 133
Query: 45 -LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+ + M+TK C H FC CI A+ S +CPTCRKK+ +K +R
Sbjct: 134 KFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAI-SRQGKCPTCRKKVTAKELIR 185
>gi|345321591|ref|XP_001521257.2| PREDICTED: zinc-binding protein A33-like [Ornithorhynchus anatinus]
Length = 422
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK--ECPTCRKKLVSKRSLR 97
SL EL C IC D+ + + ECLH FC +CI S + CP CR++L S+ R
Sbjct: 9 SLREELTCAICCDLFTEPVML-ECLHHFCKECIQRYWASCPRVTSCPQCRRELPSRAFRR 67
Query: 98 ADPNFDLLISKI 109
DLL+S +
Sbjct: 68 -----DLLVSGV 74
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 31 NTEIAVSPRS------------LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS 78
N EI V RS + EL CPICL + ++ C H FC+ CI+ +++
Sbjct: 353 NREIVVRDRSRSKMADTSHLERMGRELKCPICLSLYNSAVSL-SCNHVFCNACIVKSMKM 411
Query: 79 GNKECPTCRKKLVSKRSLRADPNFDLLISKIY 110
+ CP C K +R +R P+ D L+S IY
Sbjct: 412 -DATCPVC-KIPYHRREIRGAPHMDSLVS-IY 440
>gi|11127996|gb|AAG31173.1| COP1 [Ipomoea nil]
Length = 677
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL+CPIC+ ++K T C H FC CI+T L + +CP C L + + P
Sbjct: 47 LDRELLCPICMQIIKDAFLT-SCGHSFCYMCIVTHLHN-KSDCPCCSHYLTTAQLY---P 101
Query: 101 NFDLLISKIYPSRDEYEAHQV 121
NF L+ K+ + AHQ+
Sbjct: 102 NF--LLDKLLK---KTSAHQI 117
>gi|3121867|sp|P93471.1|COP1_PEA RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|1694900|emb|CAA70768.1| Cop1 protein [Pisum sativum]
gi|8574409|emb|CAB94801.1| COP1 regulatory protein [Pisum sativum]
Length = 672
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L + +CPIC+ ++K T C H FC CIIT LR+ +CP C L + P
Sbjct: 41 LDKDFLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCGHYLTNSNLF---P 95
Query: 101 NFDL 104
NF L
Sbjct: 96 NFLL 99
>gi|392571351|gb|EIW64523.1| RING/U-box, partial [Trametes versicolor FP-101664 SS1]
Length = 236
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 21 NRTPQEAITDNTEIAVSPR----SLHSELMCPICLDMLKKTMTTKECLHRFCSDCII--- 73
NRT I + + S R + EL CPIC+++L T T C H C DC++
Sbjct: 82 NRTKSGDIPETVDPHASARQVLSGIEEELSCPICMEVLATTYITNPCGHSCCGDCLLQWI 141
Query: 74 -TALRSGNKE---CPTCRKKLVSKR 94
T+ + G E CP CR +L R
Sbjct: 142 DTSRKPGPTEHPKCPVCRTQLCRDR 166
>gi|340382911|ref|XP_003389961.1| PREDICTED: hypothetical protein LOC100633652 [Amphimedon
queenslandica]
Length = 1138
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
P + + T+ ++ H E+ CP+CL++L C H FC C I +++ N C
Sbjct: 165 PSDILNRVTDFHIAVPHGHVEIECPVCLNILTDPHIVSCCGHNFCGSC-IERVKASNGSC 223
Query: 84 PTCRKK 89
P C++K
Sbjct: 224 PMCKEK 229
>gi|338727739|ref|XP_003365548.1| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 3 [Equus
caballus]
Length = 571
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
+R A+ D + +AV P + L C IC D+L ++ + C+H FC+ C + +
Sbjct: 186 SRDTHTALEDVSTVAVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWMERS 244
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL--VQ 138
CPTCR + I K + + EA+ +L+ +KS S+ + +
Sbjct: 245 ALCPTCRCPVER-------------ICKNHILNNLVEAY---LLQHPDKSRSEEDVRSMA 288
Query: 139 SINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTS--VQQ----------------Q 180
+ N+ + Q +++R+ + +G+ E+ ++S+ D S V Q Q
Sbjct: 289 ARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDVSQPYVVCRQCPEYRRQAGQ 348
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTK 217
P P P + P P++P PS++A+ +T +
Sbjct: 349 PLPCPGPGS------EPGAPQAPGDAPSTSATVTTAQ 379
>gi|71043360|gb|AAZ20642.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1450
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|348530984|ref|XP_003452990.1| PREDICTED: nuclear factor 7, brain-like [Oreochromis niloticus]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSKRSLRADPNF 102
+L+CPICLD+ + ++T C H FC +C+ +S N +CP C+ KL +R D
Sbjct: 89 QLLCPICLDLFNQPVSTP-CGHNFCRECLQRYWQSSNMPQCPMCKHKLY----MRPDLKV 143
Query: 103 DLLISKIYPSRDEYEAHQVRVLEKLNKSHSQA 134
+ IS++ +H ++EK N++ S
Sbjct: 144 NTFISEV-------ASHFKELVEKKNENESSG 168
>gi|414879006|tpg|DAA56137.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
+L CPIC++ + + +T C H FC CI A+++ K+CPTCR+KL ++ R
Sbjct: 203 KLSCPICMNEITEAASTV-CGHIFCQPCIKAAIKA-QKKCPTCRRKLTPRQQHR 254
>gi|340374691|ref|XP_003385871.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Amphimedon
queenslandica]
Length = 616
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNF 102
S+++CP+C D+ T C H FC +CI ++ + ++CP C KL R PNF
Sbjct: 21 SDVICPVCFDIFTSVQVTV-CGHSFCHECIHKSI-AQTQQCPICGTKL--SRDSGFAPNF 76
Query: 103 DL--LISKIYP---------SRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKL 146
L +++KI S D Y + +++++ L +H AL + I+ I L
Sbjct: 77 SLNDIVAKIRSQETHHDASLSYDAYYGNVLQMVKNLKPNH-LIALNEQISSQIDL 130
>gi|4506561|ref|NP_002929.1| E3 ubiquitin-protein ligase RNF4 isoform 1 [Homo sapiens]
gi|297139777|ref|NP_001171938.1| E3 ubiquitin-protein ligase RNF4 isoform 1 [Homo sapiens]
gi|426343613|ref|XP_004038387.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Gorilla gorilla
gorilla]
gi|426343617|ref|XP_004038389.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Gorilla gorilla
gorilla]
gi|426343619|ref|XP_004038390.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Gorilla gorilla
gorilla]
gi|18202358|sp|P78317.1|RNF4_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF4; AltName: Full=RING
finger protein 4; AltName: Full=Small nuclear ring
finger protein; Short=Protein SNURF
gi|1843401|dbj|BAA19122.1| zinc finger protein [Homo sapiens]
gi|2565164|gb|AAC52022.1| RNF4 [Homo sapiens]
gi|71297476|gb|AAH31935.1| RNF4 protein [Homo sapiens]
gi|167773491|gb|ABZ92180.1| ring finger protein 4 [synthetic construct]
gi|189069095|dbj|BAG35433.1| unnamed protein product [Homo sapiens]
gi|193785562|dbj|BAG54620.1| unnamed protein product [Homo sapiens]
gi|208967354|dbj|BAG73691.1| ring finger protein 4 [synthetic construct]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|340368406|ref|XP_003382743.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Amphimedon
queenslandica]
Length = 880
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
R ++L CP+C K T+ TK C H FCS+CI T + ++CP C
Sbjct: 819 RIYRTKLNCPVCASRKKDTVLTK-CFHVFCSECIKTRYETRQRKCPKC 865
>gi|449266091|gb|EMC77207.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 369
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS-KRSLRADPNF 102
CPICLD ++ CLH+FC CI+ +S ECP C++++ S S++ D +F
Sbjct: 45 CPICLDSWEEASYVMPCLHQFCYTCILRWAQS-KPECPLCKRRIHSIIHSVQGDDDF 100
>gi|326507272|dbj|BAJ95713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI E CP C L LRAD +
Sbjct: 115 MTCPLCNRLLRDATTVSECLHTFCRKCIYKKFNDEEVESCPVCNIDLGCTPVEKLRADHS 174
Query: 102 FDLLISKIYP-SRDEYEAHQV 121
+ SKI+P R + +A V
Sbjct: 175 LHDVRSKIFPFKRKKIKAEDV 195
>gi|308080596|ref|NP_001183915.1| uncharacterized protein LOC100502508 [Zea mays]
gi|238015412|gb|ACR38741.1| unknown [Zea mays]
Length = 263
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+L CPIC++ + + +T C H FC CI A+++ K+CPTCR+KL ++ R
Sbjct: 206 KLSCPICMNEITEAASTV-CGHIFCQPCIKAAIKA-QKKCPTCRRKLTPRQQHRV 258
>gi|390371119|dbj|GAB65000.1| hypothetical protein PCYB_042020 [Plasmodium cynomolgi strain B]
Length = 296
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVSKR 94
CPICL ++ +T C H FC +C+ TA++ + + CP+CR K+V R
Sbjct: 172 CPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDNCPSCRTKIVYDR 220
>gi|297795545|ref|XP_002865657.1| hypothetical protein ARALYDRAFT_494930 [Arabidopsis lyrata subsp.
lyrata]
gi|297311492|gb|EFH41916.1| hypothetical protein ARALYDRAFT_494930 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQ-EAITD------NTEIAVSPRSLHSE--------- 44
M E GTT+ + R P E + D N E+ +S R S+
Sbjct: 85 MVDVESGGTTRLPANISNKRRRVPSSEPVIDCEHAYVNDEVNMSSRMSRSKAPAPPPEEP 144
Query: 45 -LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+ + M+TK C H FC CI A+ S +CPTCRKK+ +K +R
Sbjct: 145 KFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAI-SRQGKCPTCRKKVTAKELIR 196
>gi|119623665|gb|EAX03260.1| tripartite motif-containing 31, isoform CRA_d [Homo sapiens]
Length = 196
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|119602930|gb|EAW82524.1| ring finger protein 4, isoform CRA_b [Homo sapiens]
Length = 195
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 106 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 161
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 162 VFCSQCLRDSLKNANT-CPTCRKKINHKR 189
>gi|21537318|gb|AAM61659.1| unknown [Arabidopsis thaliana]
Length = 203
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQ-EAITD------NTEIAVSPRSLHSE--------- 44
M E GTT+ + R P E++ D N E+ +S R S+
Sbjct: 85 MVDVESGGTTRLPANISNKRRRIPSSESVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEP 144
Query: 45 -LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPIC+ + M+TK C H FC CI A+ S +CPTCRKK+ +K +R
Sbjct: 145 KFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAI-SRQGKCPTCRKKVTAKELIRV 197
>gi|449283268|gb|EMC89948.1| Polycomb group RING finger protein 1, partial [Columba livia]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K+
Sbjct: 3 EVKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPMCNTKIHE 61
Query: 93 KR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ +L+ D ++ K+ P E E ++R
Sbjct: 62 TQPLLNLKLDRVMQDIVYKLVPGLQESEEKRIR 94
>gi|395857596|ref|XP_003801177.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Otolemur garnettii]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ D V P S CPIC+D + + + EC H
Sbjct: 101 SRDTDVYVTTHTPRNT-RDEGAAGVRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|385301491|gb|EIF45678.1| putative zinc ring finger protein [Dekkera bruxellensis AWRI1499]
Length = 533
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPN 101
+ +CPIC + K + +C H FC C++ R G CP CRK +V L+AD N
Sbjct: 433 DYLCPICCSVAYKPIRL-DCGHTFCVRCLVKLQRKGEDRCPLCRKXVV----LKADEN 485
>gi|68074651|ref|XP_679242.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499945|emb|CAH98567.1| conserved hypothetical protein [Plasmodium berghei]
Length = 673
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 8 GTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRF 67
T S E + Y+ N +P DN + L L+C +C++ + + K C H +
Sbjct: 583 NTLCSMEKNKYKKNLSPNNE--DNNLLIEENNELRRRLICSVCMENFRNYIIIK-CGHIY 639
Query: 68 CSDCIITALRSGNKECPTCR 87
C CI L+S N++CP C+
Sbjct: 640 CETCIFNNLKSRNRKCPQCK 659
>gi|355566817|gb|EHH23196.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
gi|355752415|gb|EHH56535.1| E3 ubiquitin-protein ligase TRIM21 [Macaca fascicularis]
Length = 479
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + ++ EC H FC +CI + G CP CR+ + R+LR P
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLL-RNLR--P 65
Query: 101 NFDL 104
N L
Sbjct: 66 NRQL 69
>gi|345496707|ref|XP_003427793.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Nasonia
vitripennis]
Length = 675
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLKKTMTT 60
T +++GT+ + + LNR PQ IT + I + +S+ +CPIC + +++ T
Sbjct: 3 TDGDEAGTSTGSQ--SHRLNR-PQAQITTFMQGINSTLEDKNSDYLCPICFETIEEAHVT 59
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL--LISKIYPSR 113
+ C H FC CII +L S + CP C L + PNF L LI+K Y +R
Sbjct: 60 R-CGHTFCYKCIIRSLESLGR-CPKCNINLTQQDIF---PNFLLNELIAK-YKTR 108
>gi|219127250|ref|XP_002183852.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404575|gb|EEC44521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 780
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE----CPTCRKKLVSKRSLRADP 100
L CP+CL + +T C H +C C+ AL +G+ CP C+++ +RSL P
Sbjct: 66 LSCPLCLSTYRDAVTLP-CCHAYCRSCLTQALATGSARRPPTCPCCQQRTAGRRSLTDAP 124
Query: 101 NFDLLI 106
+ L+
Sbjct: 125 KLNELV 130
>gi|383860160|ref|XP_003705559.1| PREDICTED: uncharacterized protein LOC100877553 [Megachile
rotundata]
Length = 1915
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MT T Q + + Y+ + + + + E AV + +L+C IC D+L +
Sbjct: 201 MTPTGQYAVP-AIDHQAYKEGKKERPPFSQDPEPAVEKPEIPEDLLCKICKDLLTDAVMI 259
Query: 61 KECLHRFCSDCIITA-LRSGNKECPTCRKKLVSKRSL 96
C + FC +CI T L S ECP C +K VS +L
Sbjct: 260 PCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETL 296
>gi|327265422|ref|XP_003217507.1| PREDICTED: tripartite motif-containing protein 62-like [Anolis
carolinensis]
Length = 426
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR--SGNKECPTCRKKLVSKRSL 96
+SL EL C IC D+ +K + +C+H FC +CI + SG CP CR++ + RS
Sbjct: 8 QSLREELTCAICFDLFRKPVML-DCMHHFCQECIQSYWESCSGVATCPQCRREFPT-RSF 65
Query: 97 RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKS 130
R ++ K+ R E H+ +V + L ++
Sbjct: 66 RPQYLVSGVVEKV--RRCTSEEHRSKVQKHLEEA 97
>gi|402894471|ref|XP_003910381.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Papio anubis]
Length = 468
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + ++ EC H FC +CI + G CP CR+ + R+LR P
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLL-RNLR--P 65
Query: 101 NFDL 104
N L
Sbjct: 66 NRQL 69
>gi|281211863|gb|EFA86025.1| hypothetical protein PPL_01258 [Polysphondylium pallidum PN500]
Length = 467
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L CPIC D + C H FCS CI N CP CRK S LR + D
Sbjct: 5 LKCPICFDFFDTALMIITCSHNFCSLCIKKYFSQPNLHCPICRKA-ASTSELRNNRLLDE 63
Query: 105 LISKI 109
L++ +
Sbjct: 64 LVTAL 68
>gi|114051534|ref|NP_001040054.1| E3 ubiquitin ligase RNF4 [Bos taurus]
gi|92096629|gb|AAI14681.1| Ring finger protein 4 [Bos taurus]
gi|296486326|tpg|DAA28439.1| TPA: ring finger protein 4 [Bos taurus]
Length = 186
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 128 CPICMDGYSEIVQNGRLIVSTECGHIFCSQCLRDSLKNANT-CPTCRKKMSHKR 180
>gi|1770499|emb|CAA69165.1| put. ring protein [Homo sapiens]
Length = 236
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V + ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLC-KTSVRRDAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|332259950|ref|XP_003279046.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Nomascus leucogenys]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGTTGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|325184403|emb|CCA18895.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
L C ICLD++ + MT+ C H FC CI +A+RS +K CP C++KL
Sbjct: 221 LKCSICLDLIDR-MTSTICGHVFCRHCIRSAIRSTSK-CPLCQRKL 264
>gi|327266656|ref|XP_003218120.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 506
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L EL CPICL+ + +T C H FC C+ CP CRKK V KR +R
Sbjct: 8 KELCEELSCPICLEYFVEPVTIS-CGHNFCQSCLDQCWEGKEASCPQCRKK-VQKRDIR- 64
Query: 99 DPNFDL 104
PN L
Sbjct: 65 -PNRQL 69
>gi|301786406|ref|XP_002928629.1| PREDICTED: 52 kDa Ro protein-like [Ailuropoda melanoleuca]
Length = 469
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + + M+ +C H FC +CI + G CP C+ + R+LR P
Sbjct: 10 MWEEVTCPICLDPMVEPMSI-DCGHSFCHECISEVGKDGGSVCPVCKHNFLL-RNLR--P 65
Query: 101 NFDL 104
N+ L
Sbjct: 66 NWPL 69
>gi|168040460|ref|XP_001772712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675937|gb|EDQ62426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 29 TDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
+++ ++A + + + +CPIC ++ T C H FC CI T L + CP+C +
Sbjct: 32 SESVDVARASAGVDKDFLCPICFQTMEDAFVTN-CGHSFCYTCITTHL-NNRSNCPSCAR 89
Query: 89 KLVSKRSLRADPNFDLLISKI 109
L S+ + PNF L+SK+
Sbjct: 90 YLTSEHLI---PNF--LLSKL 105
>gi|194214449|ref|XP_001493398.2| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 1 [Equus
caballus]
Length = 661
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
+R A+ D + +AV P + L C IC D+L ++ + C+H FC+ C + +
Sbjct: 276 SRDTHTALEDVSTVAVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWMERS 334
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL--VQ 138
CPTCR + I K + + EA+ +L+ +KS S+ + +
Sbjct: 335 ALCPTCRCPVER-------------ICKNHILNNLVEAY---LLQHPDKSRSEEDVRSMA 378
Query: 139 SINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTS--VQQ----------------Q 180
+ N+ + Q +++R+ + +G+ E+ ++S+ D S V Q Q
Sbjct: 379 ARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDVSQPYVVCRQCPEYRRQAGQ 438
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTK 217
P P P + P P++P PS++A+ +T +
Sbjct: 439 PLPCPGPGS------EPGAPQAPGDAPSTSATVTTAQ 469
>gi|326520948|dbj|BAJ92837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPT 85
A+ + + V L + C +C +L++ T ECLH FC CI L + CP
Sbjct: 67 AVDGSGVVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPV 126
Query: 86 CRKKL--VSKRSLRADPNFDLLISKIYP-SRDEYEAHQ 120
C+ L LRAD N + SKI+P R++ +A +
Sbjct: 127 CKIDLGCAPVEKLRADHNKQDVRSKIFPLKRNKIDAKE 164
>gi|325191351|emb|CCA26132.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 266
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 31/116 (26%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
TSTE+S +T E T +E I DN +CPICL L + T+
Sbjct: 21 TSTEESFSTS-------EAIHTNEEDILDNE-------------LCPICLQKLDAAVMTQ 60
Query: 62 ECLHRFCSDCIITAL--------RSGNKECPTCRKKLVSKRSLRADPNFDLLISKI 109
C H FC DCI + + G ECP C+++ R+L A+ D+ + K+
Sbjct: 61 NCGHIFCCDCICLWVDHVTKKSRKRGLPECPMCKREF---RTLYANITSDIHLVKL 113
>gi|338727737|ref|XP_003365547.1| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 2 [Equus
caballus]
Length = 649
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
+R A+ D + +AV P + L C IC D+L ++ + C+H FC+ C + +
Sbjct: 264 SRDTHTALEDVSTVAVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWMERS 322
Query: 81 KECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL--VQ 138
CPTCR + I K + + EA+ +L+ +KS S+ + +
Sbjct: 323 ALCPTCRCPVER-------------ICKNHILNNLVEAY---LLQHPDKSRSEEDVRSMA 366
Query: 139 SINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTS--VQQ----------------Q 180
+ N+ + Q +++R+ + +G+ E+ ++S+ D S V Q Q
Sbjct: 367 ARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDVSQPYVVCRQCPEYRRQAGQ 426
Query: 181 PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTK 217
P P P + P P++P PS++A+ +T +
Sbjct: 427 PLPCPGPGS------EPGAPQAPGDAPSTSATVTTAQ 457
>gi|317419829|emb|CBN81865.1| Polycomb complex protein BMI-1-A [Dicentrarchus labrax]
Length = 333
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ + L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQVRVLEKLNKSHSQAA 135
+D ++ K+ P RD Y H V N+ + A
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGSNEDRGEVA 117
>gi|384475583|ref|NP_001244974.1| tripartite motif containing 21 [Macaca mulatta]
gi|383421057|gb|AFH33742.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
Length = 475
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + ++ EC H FC +CI + G CP CR+ + R+LR P
Sbjct: 10 MWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLL-RNLR--P 65
Query: 101 NFDL 104
N L
Sbjct: 66 NRQL 69
>gi|71043358|gb|AAZ20641.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1072
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|326508722|dbj|BAJ95883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPT 85
A+ + + V L + C +C +L++ T ECLH FC CI L + CP
Sbjct: 67 AVDGSGVVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPV 126
Query: 86 CRKKL--VSKRSLRADPNFDLLISKIYP-SRDEYEAHQ 120
C+ L LRAD N + SKI+P R++ +A +
Sbjct: 127 CKIDLGCAPVEKLRADHNKQDVRSKIFPLKRNKIDAKE 164
>gi|301782257|ref|XP_002926543.1| PREDICTED: TNF receptor-associated factor 6-like [Ailuropoda
melanoleuca]
Length = 541
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + +
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNF 122
Query: 101 NFDLLISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
++S + +E H ++R LE +++H + AL+ LQ Q Q+ + N
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLED-HQAHCEFALMNC------LQCQRPFQKCQLN 175
Query: 159 IQGNEE 164
I ++E
Sbjct: 176 IHIHKE 181
>gi|291412357|ref|XP_002722444.1| PREDICTED: ring finger protein 4 [Oryctolagus cuniculus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|157128543|ref|XP_001661477.1| ring finger protein [Aedes aegypti]
gi|108872542|gb|EAT36767.1| AAEL011179-PA [Aedes aegypti]
Length = 276
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR---KKLVSKRS 95
+ + + C +C L + T +CLH FC CI+ L GNK CP C+ K ++ +
Sbjct: 41 KDFNDSITCSLCNGYLIEATTINDCLHTFCRSCIVRHL-EGNKYCPKCKSYNNKTITVAN 99
Query: 96 LRADPNFDLLISKIYPS 112
LR D L+ K+ P
Sbjct: 100 LRPDRILRSLVYKLVPG 116
>gi|148664542|gb|EDK96958.1| ring finger protein 138, isoform CRA_b [Mus musculus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT--RRERACPERA 72
Query: 104 LLISKI 109
L + I
Sbjct: 73 LDLENI 78
>gi|413923093|gb|AFW63025.1| putative RING zinc finger and VWF domain family protein [Zea mays]
Length = 688
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 46 MCPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
MC IC D +K + + T EC H F CI ++++ GN CP CR K
Sbjct: 77 MCAICFDSMKPGRGQALFTAECSHMFHFHCISSSVKHGNHVCPVCRAK 124
>gi|195027952|ref|XP_001986846.1| GH21599 [Drosophila grimshawi]
gi|193902846|gb|EDW01713.1| GH21599 [Drosophila grimshawi]
Length = 1357
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC +C+I LR + CP C + +K ++++
Sbjct: 11 AVNPHIICHLCQGYLINATTIVECLHSFCHNCLINHLRK-ERYCPRCEMVINNAKPNIKS 69
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 70 DTTLQAIVYKLVPGLYERELMRKRGFYK 97
>gi|345309552|ref|XP_001519774.2| PREDICTED: RING finger protein 112-like [Ornithorhynchus anatinus]
Length = 616
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG--------NKECPTCRKKLVS 92
L + C ICLD+LK +T EC H FCSDCI +G + CP C++
Sbjct: 4 LEEDFTCSICLDLLKSPITL-ECGHNFCSDCITVHWTTGEQGTPSSAQRRCPECQRPCQR 62
Query: 93 KRSLRADPNFDL--LISKIYPSRD 114
RS+ PN L L+ K P ++
Sbjct: 63 DRSV---PNTRLQNLLWKAMPYQE 83
>gi|113205502|ref|NP_001037993.1| RING finger protein 4 [Sus scrofa]
gi|80973861|gb|ABB53639.1| ring finger protein 4 [Sus scrofa]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|355716948|gb|AES05774.1| ring finger protein 4 [Mustela putorius furo]
Length = 189
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|260823296|ref|XP_002604119.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
gi|229289444|gb|EEN60130.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
Length = 591
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII-TALRSGNKECPTCRKKL 90
R +H EL C ICL++ + C H FC DC+ A R G +CP CR+++
Sbjct: 10 REVHEELSCSICLELFTRPKVLP-CQHTFCQDCLQDLAGRGGAFQCPICRQQV 61
>gi|147906248|ref|NP_001084738.1| uncharacterized protein LOC414708 [Xenopus laevis]
gi|46329615|gb|AAH68930.1| MGC83173 protein [Xenopus laevis]
Length = 317
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR---SLR 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R S+R
Sbjct: 12 LNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLEA-HKFCPMCDSQVHKGRPLLSIR 70
Query: 98 ADPNFDLLISKIYPS 112
+D ++ K+ P
Sbjct: 71 SDKTLQDIVYKLVPG 85
>gi|148675578|gb|EDL07525.1| mCG120273 [Mus musculus]
Length = 290
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L S +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLES-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
++ ++ K+ P RD Y AH
Sbjct: 71 SNKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|170033008|ref|XP_001844371.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
gi|167873485|gb|EDS36868.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
Length = 685
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNF 102
++ +CPIC D++ + TK C H FC CII ++ K+CP C L S S+ PN+
Sbjct: 56 NDFLCPICFDVITEAHITK-CGHTFCHHCIIKSIEV-TKKCPKCNYTLTSHDSIV--PNY 111
Query: 103 DL--LISKI 109
L LI+K
Sbjct: 112 LLNDLITKF 120
>gi|71043362|gb|AAZ20643.1| truncated posterior sex combs [Drosophila melanogaster]
gi|71043370|gb|AAZ20647.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1095
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|410957953|ref|XP_003985588.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 [Felis catus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|281343983|gb|EFB19567.1| hypothetical protein PANDA_018608 [Ailuropoda melanoleuca]
Length = 473
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ E+ CPICLD + + M+ +C H FC +CI + G CP C+ + R+LR P
Sbjct: 10 MWEEVTCPICLDPMVEPMSI-DCGHSFCHECISEVGKDGGSVCPVCKHNFL-LRNLR--P 65
Query: 101 NFDL 104
N+ L
Sbjct: 66 NWPL 69
>gi|57525796|ref|NP_001003581.1| uncharacterized protein LOC445187 [Danio rerio]
gi|50417175|gb|AAH78201.1| Zgc:101050 [Danio rerio]
Length = 429
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDC--------IITALRSGNKECPTCRKKLV 91
+L +L+CPIC+D+ K + CLH C C + G+ CP+CR+++V
Sbjct: 18 TLEKQLICPICMDVFTKPVVILPCLHNLCRKCANELYQPTLFQVGIEGSFRCPSCRREVV 77
Query: 92 SKRSLRADPNFDLLISKI 109
R +LL+ I
Sbjct: 78 LGRHGVFGLQRNLLVENI 95
>gi|348571762|ref|XP_003471664.1| PREDICTED: E3 ubiquitin ligase RNF4-like [Cavia porcellus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKISHKR 184
>gi|149017052|gb|EDL76103.1| ring finger protein 138, isoform CRA_c [Rattus norvegicus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 15 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT--RRERACP 69
>gi|390177948|ref|XP_001358564.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
gi|388859265|gb|EAL27705.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
Length = 326
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 47 CPICLD-MLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CP+CLD +L++ ++ +C H FC CI +A+R+ +K CP C KKL ++ R
Sbjct: 273 CPVCLDCLLQREPSSTKCGHVFCRQCIESAIRATHK-CPMCNKKLSIRQVTR 323
>gi|443705208|gb|ELU01863.1| hypothetical protein CAPTEDRAFT_191286 [Capitella teleta]
Length = 429
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRA 98
++ SEL+CPIC + + T+ C H FC+ CI L+ N ECP CR+ + S+ RS
Sbjct: 308 AMESELVCPICHEYFVEA-TSLNCSHTFCAVCIDIWLQ-DNFECPQCRQDVDSRVRSRAL 365
Query: 99 DPNFDLLISKIYPSRDEYEA 118
D + D L+ + + +E EA
Sbjct: 366 DNHIDRLMDSV--TEEEKEA 383
>gi|358418416|ref|XP_595840.6| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
gi|359078714|ref|XP_002697406.2| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
Length = 574
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK--ECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+ T +C H FC CI + + + +CP C K + KR
Sbjct: 10 LQEEMICPICLDILQDPATI-DCGHNFCLSCITQSGEAADSVLKCPLCNK--IVKRD-TI 65
Query: 99 DPNFDL--LISKIY---PSRDEYEAHQVRVLEKLNKSH 131
PN+ L L+ KI PS + E ++R L K H
Sbjct: 66 TPNWLLVNLVEKIQAMDPSDMQPETEELRCLRHGEKCH 103
>gi|390342845|ref|XP_789994.3| PREDICTED: TNF receptor-associated factor 6-A-like
[Strongylocentrotus purpuratus]
Length = 631
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 21 NRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN 80
NR + + + P +L + CPICL L+ + T EC HRFCSDCI LR+
Sbjct: 98 NRGAESPLPSGYDYHFEP-TLDPKYECPICLMCLRDPVQT-ECGHRFCSDCIKRCLRNAG 155
Query: 81 KECPT 85
CP
Sbjct: 156 LRCPV 160
>gi|116784892|gb|ABK23508.1| unknown [Picea sitchensis]
gi|224284637|gb|ACN40051.1| unknown [Picea sitchensis]
gi|224285742|gb|ACN40586.1| unknown [Picea sitchensis]
Length = 231
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
+L C IC+D +K+ +T C H FC CI++A++ K+CPTCR+KL
Sbjct: 172 KLTCAICMDSMKEETSTI-CGHIFCRSCIMSAIQF-QKKCPTCRRKL 216
>gi|392566331|gb|EIW59507.1| hypothetical protein TRAVEDRAFT_58308 [Trametes versicolor
FP-101664 SS1]
Length = 526
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
SL EL C C ++ + + C H FC C+I +R+G CP CR
Sbjct: 82 SLEEELQCGCCSAIVYRPVVVAPCQHFFCGSCVILWIRNGGTSCPACR 129
>gi|354493537|ref|XP_003508897.1| PREDICTED: E3 ubiquitin ligase RNF4-like [Cricetulus griseus]
Length = 194
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 136 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>gi|149047426|gb|EDM00096.1| ring finger protein 4, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 141 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 193
>gi|149756948|ref|XP_001489231.1| PREDICTED: e3 ubiquitin ligase RNF4-like [Equus caballus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|380027905|ref|XP_003697655.1| PREDICTED: uncharacterized protein LOC100865279 [Apis florea]
Length = 1303
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRAD 99
L+ +L C +C T ECLH FC CI+ L NK CP C ++ SK L
Sbjct: 15 LNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLLNIR 73
Query: 100 PNFDL--LISKIYPS 112
P++ L ++ K+ P
Sbjct: 74 PDYTLQDIVYKLVPG 88
>gi|350422954|ref|XP_003493340.1| PREDICTED: hypothetical protein LOC100746991 [Bombus impatiens]
Length = 1391
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ +L C +C T ECLH FC CI+ L + NK CP C ++ + L R
Sbjct: 15 LNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLEN-NKYCPICEVQVHKSKPLLNIR 73
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
D ++ K+ P RD Y H
Sbjct: 74 PDHTLQDIVYKLVPGCYQNEMRCRRDFYLNH 104
>gi|348556143|ref|XP_003463882.1| PREDICTED: TNF receptor-associated factor 6-like [Cavia porcellus]
Length = 543
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + +
Sbjct: 66 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNF 124
Query: 101 NFDLLISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
++S + +E H ++R LE +++H + AL+ LQ Q +Q+ + N
Sbjct: 125 AKREILSLMVKCPNEGCLHKMELRHLED-HQAHCEFALINC------LQCQRPIQKCQLN 177
Query: 159 IQ 160
I
Sbjct: 178 IH 179
>gi|301762346|ref|XP_002916589.1| PREDICTED: RING finger protein 4-like [Ailuropoda melanoleuca]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|291398934|ref|XP_002715157.1| PREDICTED: ring finger protein 4 [Oryctolagus cuniculus]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLHDSLKNANT-CPTCRKKINHKR 184
>gi|344271139|ref|XP_003407399.1| PREDICTED: E3 ubiquitin-protein ligase UHRF2-like [Loxodonta
africana]
Length = 803
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
+ L MC C +++ + +TT ECLH C DC+ + ++ CP CR L +
Sbjct: 726 KKLEQSFMCVCCQELVYQPVTT-ECLHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMTP 784
Query: 99 DPNFDLLISKIYPS 112
+ N L+ +P
Sbjct: 785 NENLQTLLDLFFPG 798
>gi|9507057|ref|NP_062055.1| E3 ubiquitin-protein ligase RNF4 [Rattus norvegicus]
gi|18202243|sp|O88846.1|RNF4_RAT RecName: Full=E3 ubiquitin-protein ligase RNF4; AltName: Full=RING
finger protein 4; AltName: Full=Small nuclear ring
finger protein; Short=Protein SNURF
gi|3510468|gb|AAC35248.1| small nuclear RING finger protein [Rattus norvegicus]
gi|15808680|gb|AAL06715.1| small nuclear RING finger protein [Rattus norvegicus]
gi|38304030|gb|AAH62024.1| Rnf4 protein [Rattus norvegicus]
Length = 194
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 136 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>gi|413937823|gb|AFW72374.1| putative RING zinc finger and VWF domain family protein [Zea mays]
Length = 897
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 46 MCPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
MC IC D +K + + T EC H F CI ++++ GN CP CR K
Sbjct: 130 MCAICFDSMKPGLGQALFTAECSHMFHFHCISSSVKHGNHVCPVCRAK 177
>gi|348543540|ref|XP_003459241.1| PREDICTED: tripartite motif-containing protein 16-like [Oreochromis
niloticus]
Length = 472
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITAL----RSGNKECPTCRKKLVSKRSLRADPNF 102
CPICLD+L +T C H +C +CI T R G CP CRK + + L+ + F
Sbjct: 15 CPICLDLLNDPVTIP-CGHSYCMNCIKTHFDEEDRKGIHSCPQCRKTFIPRPVLKKNVMF 73
Query: 103 DLLISKI 109
L+ +
Sbjct: 74 AELVEDL 80
>gi|79480107|ref|NP_193839.4| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
gi|75158839|sp|Q8RXD4.1|BRCA1_ARATH RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog;
Short=AtBRCA1
gi|19698963|gb|AAL91217.1| unknown protein [Arabidopsis thaliana]
gi|28372474|gb|AAO39850.1| BRCA1 [Arabidopsis thaliana]
gi|34365717|gb|AAQ65170.1| At4g21070 [Arabidopsis thaliana]
gi|332658996|gb|AEE84396.1| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
Length = 941
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ EL CPICL + ++ C H FC+ CI+ +++ + CP C K +R +R P
Sbjct: 10 MGRELKCPICLSLYNSAVSL-SCNHVFCNACIVKSMKM-DATCPVC-KIPYHRREIRGAP 66
Query: 101 NFDLLISKIY 110
+ D L+S IY
Sbjct: 67 HMDSLVS-IY 75
>gi|302813290|ref|XP_002988331.1| hypothetical protein SELMODRAFT_447286 [Selaginella moellendorffii]
gi|300144063|gb|EFJ10750.1| hypothetical protein SELMODRAFT_447286 [Selaginella moellendorffii]
Length = 214
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
L C IC D +K T+ C H FC CI++A+++ K CPTCR+KL
Sbjct: 155 LTCGICFDTMKNE-TSTVCGHLFCGSCILSAIQA-QKRCPTCRRKL 198
>gi|440907106|gb|ELR57292.1| E3 ubiquitin ligase RNF4, partial [Bos grunniens mutus]
Length = 181
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 123 CPICMDGYSEIVQNGRLIVSTECGHIFCSQCLRDSLKNANT-CPTCRKKMSHKR 175
>gi|231291746|dbj|BAH58735.1| tripartite motif-containing 31 gamma [Homo sapiens]
Length = 262
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V + ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRRDAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>gi|296474320|tpg|DAA16435.1| TPA: tripartite motif-containing protein 31-like [Bos taurus]
Length = 574
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK--ECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+ T +C H FC CI + + + +CP C K + KR
Sbjct: 10 LQEEMICPICLDILQDPATI-DCGHNFCLSCITQSGEAADSVLKCPLCNK--IVKRD-TI 65
Query: 99 DPNFDL--LISKIY---PSRDEYEAHQVRVLEKLNKSH 131
PN+ L L+ KI PS + E ++R L K H
Sbjct: 66 TPNWLLVNLVEKIQAMDPSDMQPETEELRCLRHGEKCH 103
>gi|387018154|gb|AFJ51195.1| Polycomb group RING finger protein 5-like [Crotalus adamanteus]
Length = 256
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK---RS 95
+ + + C IC L K T ECLH FC CI+ N +CP C ++
Sbjct: 10 KDFNPYITCCICKGYLIKPTTVTECLHTFCKSCIVQHFEDSN-DCPRCGNQVHETNPLEM 68
Query: 96 LRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
LR D + +I K+ P E E H+ K NK
Sbjct: 69 LRLDNTLEEIIFKLVPGLREKELHREAEFWKKNK 102
>gi|355557399|gb|EHH14179.1| E3 ubiquitin ligase RNF4, partial [Macaca mulatta]
gi|355744795|gb|EHH49420.1| E3 ubiquitin ligase RNF4, partial [Macaca fascicularis]
Length = 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 131 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 183
>gi|356546514|ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
max]
Length = 979
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL CPIC +L ++ C H FC+ CI +++S + CP C+ ++R +R P+ D
Sbjct: 10 ELKCPICWSLLDSAVSLT-CNHLFCNSCIFKSMKSASA-CPVCKIPF-TRREVRPAPHMD 66
Query: 104 LLISKIY 110
L+S IY
Sbjct: 67 NLVS-IY 72
>gi|302819530|ref|XP_002991435.1| hypothetical protein SELMODRAFT_448405 [Selaginella moellendorffii]
gi|300140828|gb|EFJ07547.1| hypothetical protein SELMODRAFT_448405 [Selaginella moellendorffii]
Length = 210
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
L C IC D +K +T C H FC CI++A+++ K CPTCR+KL
Sbjct: 151 LTCGICFDTMKNETST-VCGHLFCGSCILSAIQA-QKRCPTCRRKL 194
>gi|147844369|emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
Length = 662
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL-- 90
+ V ++ + + CP+C +LK+ T CLH FC CI L + CP C L
Sbjct: 6 VKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGC 65
Query: 91 VSKRSLRADPNFDLLISKIYPSR 113
V LR D N + +KI+P +
Sbjct: 66 VPVDKLRPDHNLQDIRAKIFPFK 88
>gi|66816351|ref|XP_642185.1| hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]
gi|60470284|gb|EAL68264.1| hypothetical protein DDB_G0278183 [Dictyostelium discoideum AX4]
Length = 601
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
P + EL C ICL L + + + C FC+ C++ G CP+C K++++K L
Sbjct: 15 PIEIDKELECSICLLPLFEPVVEQNCGSMFCNQCLLNNFNIGKNNCPSC-KQIINKNKLS 73
Query: 98 ADP-----NFDLLISKIYPSRDEYEAHQVRVLEKLN--KSHSQ 133
P D L+ +D Y ++++ + +L K+HS+
Sbjct: 74 NPPKIITNKLDELLVYCIQCKDNYPENEIKYMTRLYFIKNHSE 116
>gi|344283744|ref|XP_003413631.1| PREDICTED: polycomb group RING finger protein 1-like [Loxodonta
africana]
Length = 447
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 214 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 272
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 273 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 312
>gi|224065401|ref|XP_002301799.1| predicted protein [Populus trichocarpa]
gi|222843525|gb|EEE81072.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA 98
CPICL L + M+TK C H FC CI A++ K CPTCRK++ +K +R
Sbjct: 154 CPICLCPLVEEMSTK-CGHIFCKACISDAIKRQAK-CPTCRKRVTTKELIRV 203
>gi|357111109|ref|XP_003557357.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 390
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKL 90
+ V +L + L CP+C +L+ T ECLH FC CI NKE CPTC L
Sbjct: 36 VRVKRSALVACLTCPLCRRLLRDAATITECLHTFCRKCISEEF--INKEVCRCPTCNIDL 93
Query: 91 --VSKRSLRADPNFDLLISKIYP 111
+ LR D + + SKI+P
Sbjct: 94 GCAPEEKLRVDHSLLYVRSKIFP 116
>gi|302143246|emb|CBI20541.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 47 CPICLDMLK----KTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
C ICL LK + + T EC H F +CI +++R GN+ CP CR K
Sbjct: 66 CAICLGNLKTGQGQAIFTAECSHSFHFNCIASSVRHGNQLCPICRSK 112
>gi|408391696|gb|EKJ71065.1| hypothetical protein FPSE_08729 [Fusarium pseudograminearum CS3096]
Length = 432
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 24 PQEAITDNTEIAVSPRS----LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
P+ ++D+T+ +P S + L C +C D K M T C H FCS CI AL S
Sbjct: 2 PEHNVSDSTDWLTTPLSALAAVEGALRCQVCKDFYKTPMITN-CSHTFCSLCIRRAL-SN 59
Query: 80 NKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQS 139
+ +CP CR + LR++ + + + +R + LE K +SQ + +
Sbjct: 60 DGKCPLCR-ATEQENKLRSNWSLEEAVQAFVGARSD-------TLELARKGNSQNTISKR 111
Query: 140 IN-----------EGIKLQSQHRLQRTK 156
+G +L+S RLQ T+
Sbjct: 112 KATTDRHDSGDSPDGKRLRSSSRLQNTR 139
>gi|125551370|gb|EAY97079.1| hypothetical protein OsI_19001 [Oryza sativa Indica Group]
Length = 391
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+ A K CP CR+ + + RS +
Sbjct: 158 LREELSCAICLEICFEPSTTP-CGHSFCMKCLKHAAAKCGKRCPKCRQLISNSRSCTVNT 216
Query: 101 NFDLLISKIYPSRDEYEAHQVRV-------------LEKLNKSHSQAALVQSINEGIKLQ 147
I ++PS E EA + + + + + S +Q + S + GI
Sbjct: 217 VLWNTIQLLFPS--ETEARRTSIASSSETNDDLAQQISQRSNSMAQGGIRSSSSNGIG-- 272
Query: 148 SQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIK-NQLSPAV 199
+ QR+ ++ N + + T V Q+ S T ++ +QL P+
Sbjct: 273 --YITQRSTRSSATNNRSFTTTGSRRSTFVAQEGSSTATGRGFVRASQLVPSA 323
>gi|167522208|ref|XP_001745442.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776400|gb|EDQ90020.1| predicted protein [Monosiga brevicollis MX1]
Length = 523
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL----RSGNKECPTCRK 88
RSL L CPIC + K C H FCS+CI L R+ K+CP C K
Sbjct: 26 RSLDGSLRCPICQGYFNHPVLLKTCSHNFCSECIRRHLTQQTRNFKKQCPICSK 79
>gi|315585390|gb|ADU34198.1| MuRF1c [Salmo salar]
Length = 353
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 37 SPR-SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--------GNKECPTCR 87
SPR SL S+L CPICL+M +K + C H C C S G CPTCR
Sbjct: 13 SPRESLESQLSCPICLEMFQKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCR 72
Query: 88 KKLVSKRSLRADPNFDLLISKI 109
++V R +LL+ I
Sbjct: 73 FEVVLDRHGVYGLQRNLLVENI 94
>gi|393238591|gb|EJD46127.1| DNA repair protein rad18 [Auricularia delicata TFB-10046 SS5]
Length = 375
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
CPIC + L ++ C H FCS C+ AL SG +ECP+CR+K V
Sbjct: 29 CPICKEFLDGPVSLN-CGHSFCSLCVRGAL-SGKQECPSCREKAV 71
>gi|281339998|gb|EFB15582.1| hypothetical protein PANDA_004682 [Ailuropoda melanoleuca]
Length = 185
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 127 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 179
>gi|118399223|ref|XP_001031937.1| zinc finger protein [Tetrahymena thermophila]
gi|89286273|gb|EAR84274.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 307
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI---ITALRSGNKECPTCRK 88
++I ++ ++L C ICL+++ ++ CLH FC DC+ I + N CPTCR+
Sbjct: 172 SQIKQMDENIENDLNCAICLELMHNPVSIIGCLHNFCGDCLNRFIYYNGTINNLCPTCRQ 231
Query: 89 KLVSKRSLRADPNFDLLISKIYP 111
+ + +F KIYP
Sbjct: 232 PIADVKQNSIIQSFIEKHLKIYP 254
>gi|115488108|ref|NP_001066541.1| Os12g0267900 [Oryza sativa Japonica Group]
gi|77554239|gb|ABA97035.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113649048|dbj|BAF29560.1| Os12g0267900 [Oryza sativa Japonica Group]
gi|222630730|gb|EEE62862.1| hypothetical protein OsJ_17665 [Oryza sativa Japonica Group]
Length = 391
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+ A K CP CR+ + + RS +
Sbjct: 158 LREELSCAICLEICFEPSTTP-CGHSFCMKCLKHAAAKCGKRCPKCRQLISNSRSCTVNT 216
Query: 101 NFDLLISKIYPSRDEYEAHQVRV-------------LEKLNKSHSQAALVQSINEGIKLQ 147
I ++PS E EA + + + + + S +Q + S + GI
Sbjct: 217 VLWNTIQLLFPS--ETEARRTSIASSSETNDDLAQQISQRSNSMAQGGIRSSSSNGIG-- 272
Query: 148 SQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQPSPQPTTSNAIK-NQLSPAV 199
+ QR+ ++ N + + T V Q+ S T ++ +QL P+
Sbjct: 273 --YITQRSTRSSATNNRSFTTTGSRRSTFVAQEGSSTATGRGFVRASQLVPSA 323
>gi|402852452|ref|XP_003890936.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform 1 [Papio
anubis]
gi|402852454|ref|XP_003890937.1| PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform 2 [Papio
anubis]
gi|402870809|ref|XP_003899393.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Papio anubis]
gi|380786869|gb|AFE65310.1| E3 ubiquitin ligase RNF4 isoform 1 [Macaca mulatta]
gi|383411589|gb|AFH29008.1| E3 ubiquitin ligase RNF4 isoform 1 [Macaca mulatta]
gi|384940146|gb|AFI33678.1| E3 ubiquitin ligase RNF4 isoform 1 [Macaca mulatta]
Length = 190
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|359477378|ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
Length = 429
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 IAVSPRS-LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
+A PR L + + C IC + T ECLH FC CI + + CP C L
Sbjct: 6 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 65
Query: 91 -VSKRSLRADPNFDLLISKIYPS 112
LR D N L +KI+PS
Sbjct: 66 CAPLEKLRPDHNLQDLTAKIFPS 88
>gi|335310264|ref|XP_003361952.1| PREDICTED: polycomb group RING finger protein 1-like [Sus scrofa]
Length = 262
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K+
Sbjct: 68 EVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIHE 126
Query: 93 KR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ +L+ D ++ K+ P + E ++R
Sbjct: 127 TQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 159
>gi|163914551|ref|NP_001106359.1| uncharacterized protein LOC100127334 [Xenopus laevis]
gi|161611668|gb|AAI55953.1| LOC100127334 protein [Xenopus laevis]
gi|213623278|gb|AAI69527.1| LOC100127334 protein [Xenopus laevis]
gi|213623296|gb|AAI69553.1| LOC100127334 protein [Xenopus laevis]
Length = 218
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
E MCPICL K T +C H FC DCI AL+ K CP C
Sbjct: 33 EEMCPICLSGFKNKKTLDKCKHSFCEDCISRALQV-KKACPMC 74
>gi|221058278|ref|XP_002261647.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247652|emb|CAQ41052.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 915
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
+ L LMC +C++ + + K C H FC CI + L++ N++CP C+
Sbjct: 854 KELRRRLMCSVCMENFRNHIIVK-CGHIFCESCIFSNLKTRNRKCPQCK 901
>gi|395835312|ref|XP_003790626.1| PREDICTED: probable E3 ubiquitin-protein ligase DTX3 isoform 2
[Otolemur garnettii]
Length = 350
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK---KLVSKRSLRADP 100
E CPICL ++ T ++C H FC CI AL+ K CP C + +LV +
Sbjct: 164 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGRFYGQLVGNQPQ---- 218
Query: 101 NFDLLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
N +L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 219 NGRMLVSKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLP 273
Query: 157 KNIQGNE 163
+GN+
Sbjct: 274 DCPEGNK 280
>gi|401408467|ref|XP_003883682.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
gi|325118099|emb|CBZ53650.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
Length = 791
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE---CPTCRKKLVS 92
R+L + C +C ++ +T K+CLH FC C+ G E CP C +KL S
Sbjct: 181 RALEANFRCRLCSGYFREVVTIKDCLHSFCKWCLFARAEKGELEETCCPRCEEKLSS 237
>gi|308387350|ref|NP_001184142.1| muscle RING finger 1 [Oncorhynchus mykiss]
gi|308053490|gb|ADO00982.1| muscle RING finger 1 [Oncorhynchus mykiss]
Length = 359
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 37 SPR-SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--------GNKECPTCR 87
SPR SL S+L CPICL+M +K + C H C C S G CPTCR
Sbjct: 13 SPRESLESQLSCPICLEMFQKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCR 72
Query: 88 KKLVSKRSLRADPNFDLLISKI 109
++V R +LL+ I
Sbjct: 73 FEVVLDRHGVYGLQRNLLVENI 94
>gi|303285282|ref|XP_003061931.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456342|gb|EEH53643.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1278
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
P+ L EL C IC DM C H FC +C+ T L+ N +CP CR KL+ S
Sbjct: 921 PQWLDDELRCVICTDMYVNPHALNGCGHLFCHECVSTWLKK-NNQCPICRHKLLVPTSKA 979
Query: 98 ADP 100
P
Sbjct: 980 LTP 982
>gi|297737160|emb|CBI26361.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 IAVSPRS-LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
+A PR L + + C IC + T ECLH FC CI + + CP C L
Sbjct: 51 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 110
Query: 91 -VSKRSLRADPNFDLLISKIYPS 112
LR D N L +KI+PS
Sbjct: 111 CAPLEKLRPDHNLQDLTAKIFPS 133
>gi|301097065|ref|XP_002897628.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106846|gb|EEY64898.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 249
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT-ALRSGNKECPTCRK 88
D + V L L C +C +L+ T +CLH FC CI L G+ CP C K
Sbjct: 4 DARTMTVKLAELTEHLGCVLCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCICPKCNK 63
Query: 89 KLVSK--RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
L + +L D ++ +I+P E+E VLEK
Sbjct: 64 VLSPRPIATLITDQKLQAVVDRIFPEFKEHEL----VLEK 99
>gi|392355796|ref|XP_003752135.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 209
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
P+ +D + V L + C IC L ECLH FC CI+ N+ C
Sbjct: 77 PEREGSDEEKHFVPLSQLAPFISCSICKGYLIDATAITECLHTFCKSCIVKHFEHSNR-C 135
Query: 84 PTCRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
P C + + +LR DP ++ K+ +E E Q R K N+ +
Sbjct: 136 PKCNIIVHDAKPHNNLRMDPQLQNIVYKLVEGLEEKETKQRREFYKENRGQT 187
>gi|148684775|gb|EDL16722.1| mCG121089 [Mus musculus]
Length = 520
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-----GNKECPTCRKKLVSKRSLRA 98
E+ CPICL++LK+ ++T +C H FC CII S G CP CR + + +LR
Sbjct: 12 EVTCPICLELLKEPVST-DCGHSFCQTCIILNYVSNRRMDGVGSCPVCRVGYLFE-NLRP 69
Query: 99 DPNFDLLISKI 109
+ N ++ +I
Sbjct: 70 NQNMINIVKRI 80
>gi|156379694|ref|XP_001631591.1| predicted protein [Nematostella vectensis]
gi|156218634|gb|EDO39528.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKK-LVSKRS 95
R+L+ EL C +C ++ T CLH FC +C+ L RS CP CRKK V +R
Sbjct: 60 RALNDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRG 119
Query: 96 LRADP 100
++ P
Sbjct: 120 VKGLP 124
>gi|148664544|gb|EDK96960.1| ring finger protein 138, isoform CRA_d [Mus musculus]
Length = 165
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
+ CP+C ++LK + T C H FC C +TA+R CP CR + R RA P
Sbjct: 85 DFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVT--RRERACPERA 142
Query: 104 LLISKI 109
L + I
Sbjct: 143 LDLENI 148
>gi|322789124|gb|EFZ14539.1| hypothetical protein SINV_14642 [Solenopsis invicta]
Length = 510
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
+ +L C IC ++ K TT C H FC CI + R K+CP CRK ++S RSL D
Sbjct: 422 MDEQLTCAICSELFVKA-TTLNCAHTFCHHCIKSWNRK-RKDCPVCRKPVISMIRSLVLD 479
Query: 100 PNFDLLISKIYP 111
D +I + P
Sbjct: 480 NFIDRMIDNLPP 491
>gi|167533065|ref|XP_001748213.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773333|gb|EDQ86974.1| predicted protein [Monosiga brevicollis MX1]
Length = 381
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL---VSKRSLRADPN 101
++C IC+ + T ECLH FC CI+ R +K CP C ++ +LR D
Sbjct: 167 IVCQICMGYIVNATTISECLHSFCRSCIVKHFRK-SKICPVCNQQAHETAPLDTLRQDRT 225
Query: 102 FDLLISKIYP 111
+I+K+ P
Sbjct: 226 LQSIINKLLP 235
>gi|145516643|ref|XP_001444210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411621|emb|CAK76813.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
Q I + E+ V E++CPIC ++ KEC FC CI ++ N++CP
Sbjct: 61 QSRIFNYAEVKV----FLDEVICPICCQIIVNPRVCKECDQSFCGRCIEKWFQNSNQQCP 116
Query: 85 TCRKKLVS 92
CRK +S
Sbjct: 117 CCRKSKIS 124
>gi|410908881|ref|XP_003967919.1| PREDICTED: polycomb complex protein BMI-1-like [Takifugu rubripes]
Length = 529
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ + L R
Sbjct: 216 LNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKPLLNIR 274
Query: 98 ADPNFDLLISKIYPS---------RDEYEAHQVRVLEKLNKSHSQAA 135
+D ++ K+ P RD Y H V N+ + A
Sbjct: 275 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGSNEDRGEVA 321
>gi|348535115|ref|XP_003455047.1| PREDICTED: RING finger protein 166-like [Oreochromis niloticus]
Length = 245
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
+A S+ S+ CPICL++ K ++ C H FC +C+ L+ + CP CR K
Sbjct: 28 LAAPAESIESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCPLCRVPFDPK 87
Query: 94 RSLRA 98
+ R+
Sbjct: 88 KVERS 92
>gi|326665619|ref|XP_002667272.2| PREDICTED: hypothetical protein LOC100329851 [Danio rerio]
Length = 801
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 23/104 (22%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE----CPTCRKKLVSKRSLRAD 99
+ MCP+CLD+LK +T C H +C CI ++ CP C++ + +L +
Sbjct: 12 QFMCPVCLDLLKNPVTIP-CGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 100 PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEG 143
F +LEKL KS Q A S++ G
Sbjct: 71 VVF------------------AEMLEKLQKSRLQTAAPASVHTG 96
>gi|414587878|tpg|DAA38449.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 389
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+I A K CP CR+ + + RS +
Sbjct: 161 LREELSCAICLEICFEPTTT-SCGHSFCMKCLIHAASKCGKRCPKCRQFISNSRSCTINT 219
Query: 101 NFDLLISKIYPSRDEYEAHQ 120
I ++P E EA +
Sbjct: 220 VLWNTIQLLFPG--EVEARK 237
>gi|344255690|gb|EGW11794.1| Polycomb group RING finger protein 1 [Cricetulus griseus]
Length = 512
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 14 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 72
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 73 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 112
>gi|212274993|ref|NP_001130111.1| uncharacterized protein LOC100191204 [Zea mays]
gi|194688314|gb|ACF78241.1| unknown [Zea mays]
gi|223946185|gb|ACN27176.1| unknown [Zea mays]
gi|414591245|tpg|DAA41816.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 389
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+I A K CP CR+ + + RS +
Sbjct: 161 LREELSCAICLEICFEPTTT-SCGHSFCMKCLIHAASKCGKRCPKCRQFISNSRSCTINT 219
Query: 101 NFDLLISKIYPSRDEYEAHQ 120
I ++P E EA +
Sbjct: 220 VLWNTIQLLFPG--EVEARK 237
>gi|444723342|gb|ELW63999.1| Polycomb group RING finger protein 1 [Tupaia chinensis]
Length = 456
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 14 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 72
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 73 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 112
>gi|196009736|ref|XP_002114733.1| hypothetical protein TRIADDRAFT_58523 [Trichoplax adhaerens]
gi|190582795|gb|EDV22867.1| hypothetical protein TRIADDRAFT_58523 [Trichoplax adhaerens]
Length = 177
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 13/75 (17%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLD---MLKKTMTTKE--CLHRFCSDCIITALRS 78
P ++ DNT SP + + CPIC + +KKT T + C H FCS C+ AL+
Sbjct: 104 PLNSVNDNT----SPSPV---IECPICKESYSQIKKTRTLQSTVCGHIFCSSCLKIALKR 156
Query: 79 GNKECPTCRKKLVSK 93
N ECP CRKK+++K
Sbjct: 157 KN-ECPICRKKVLAK 170
>gi|125545675|gb|EAY91814.1| hypothetical protein OsI_13455 [Oryza sativa Indica Group]
Length = 439
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS--KRSL 96
+L + + CP+C +L++ ECLH FC +CI+ + + CP C L + L
Sbjct: 15 ALVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKL 74
Query: 97 RADPNFDLLISKIYP 111
R D N + +K++P
Sbjct: 75 RPDHNVQDIRNKVFP 89
>gi|61097975|ref|NP_001012907.1| RING finger protein 4 [Gallus gallus]
gi|53127358|emb|CAG31062.1| hypothetical protein RCJMB04_1p20 [Gallus gallus]
Length = 194
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + +C H FCS C+ +LR+ N CPTCRKKL ++
Sbjct: 136 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRGSLRNANS-CPTCRKKLTHRQ 188
>gi|281203538|gb|EFA77738.1| MEK1 interacting protein 1 [Polysphondylium pallidum PN500]
Length = 517
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
P+S + CPIC + +++ ++T C H +CS CI AL+ K+CP C KL SK
Sbjct: 457 PKSKRQRVTCPICYEKIEQPVSTT-CGHVYCSPCINAALKRK-KQCPVCSTKLGSK 510
>gi|194217834|ref|XP_001914971.1| PREDICTED: TNF receptor-associated factor 6-like [Equus caballus]
Length = 508
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + +A
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQDHQAHC 122
Query: 101 NFDLL 105
F L+
Sbjct: 123 EFALM 127
>gi|192205|gb|AAA37301.1| zinc finger protein [Mus musculus]
Length = 249
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ LMC +C T ECLH FC CI+ L + +K CP C ++ R L R
Sbjct: 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIR 70
Query: 98 ADPNFDLLISKIYPS---------RDEYEAH 119
+D ++ K+ P RD Y AH
Sbjct: 71 SDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>gi|224066301|ref|XP_002302072.1| predicted protein [Populus trichocarpa]
gi|222843798|gb|EEE81345.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-GNKECPTCRKKL-- 90
+ V ++ + + C +C +L+ T ECLH FC CI + + G CP C L
Sbjct: 13 VKVRRETIAACMTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNINLGC 72
Query: 91 VSKRSLRADPNFDLLISKIYP-SRDEYEAHQV 121
V LR D N + SKI+P + + EA +V
Sbjct: 73 VPLEKLRPDHNLQDVRSKIFPYKKRKVEAPEV 104
>gi|428183799|gb|EKX52656.1| hypothetical protein GUITHDRAFT_57781, partial [Guillardia theta
CCMP2712]
Length = 67
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
CP+C+ +L + C HRFC+ C+ A G CP CRK+ V
Sbjct: 4 CPVCMHVLNNPLVL-SCGHRFCNSCVSAAAYFGQHSCPVCRKECV 47
>gi|395548609|ref|XP_003775237.1| PREDICTED: RING finger protein 166-like [Sarcophilus harrisii]
Length = 383
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
E + S L ++ CPICL++ + + C H FC +C+ L+ + CP CR
Sbjct: 164 AEPSASESDLETQYSCPICLEVYHRPVAIGNCGHVFCGECLQPCLQVPSPLCPLCRVPFD 223
Query: 92 SKRSLRA 98
SK+ RA
Sbjct: 224 SKKVDRA 230
>gi|357510115|ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
gi|355500361|gb|AES81564.1| PHD finger protein 11-like protein [Medicago truncatula]
Length = 687
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 22/125 (17%)
Query: 26 EAITDNTEIAVSPRSLHS-----ELMCPICLDMLKKTMTTKECLHRFCSDCII--TALRS 78
++I +N ++P LH EL CP+CL++ KK + C H FCS C+ T++RS
Sbjct: 6 KSIMNNNTKLLNPWMLHFQKLALELKCPLCLNLFKKPVLLP-CNHLFCSSCLADSTSIRS 64
Query: 79 GNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRD---------EYEAHQVRVLEKLNK 129
EC C K S++ +R P + +++ IY S D + + RVLE+
Sbjct: 65 ---ECALCNTK-CSQKDIRHLPFVESIVT-IYKSLDATFCANAFQQRSSDNTRVLEQCQT 119
Query: 130 SHSQA 134
H+ A
Sbjct: 120 LHNSA 124
>gi|410900956|ref|XP_003963962.1| PREDICTED: polycomb group RING finger protein 6-like [Takifugu
rubripes]
Length = 255
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
+ + C +C L T ECLH FC CI+ N+ CPTC + + L R
Sbjct: 33 FYPYIRCGLCCGFLIDASTITECLHTFCKSCIVKHFFYSNR-CPTCSIVVHETQPLYNIR 91
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P +E+E Q+R K
Sbjct: 92 PDRQLQDIVYKMVPFLEEFEREQMRNFYK 120
>gi|40539033|gb|AAR87290.1| expressed protein [Oryza sativa Japonica Group]
gi|108711005|gb|ABF98800.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125587873|gb|EAZ28537.1| hypothetical protein OsJ_12518 [Oryza sativa Japonica Group]
Length = 439
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS--KRSL 96
+L + + CP+C +L++ ECLH FC +CI+ + + CP C L + L
Sbjct: 15 ALVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKL 74
Query: 97 RADPNFDLLISKIYP 111
R D N + +K++P
Sbjct: 75 RPDHNVQDIRNKVFP 89
>gi|383858055|ref|XP_003704518.1| PREDICTED: uncharacterized protein LOC100879416 [Megachile
rotundata]
Length = 1378
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ +L C +C T ECLH FC CI+ L NK CP C ++ + L R
Sbjct: 15 LNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLLNIR 73
Query: 98 ADPNFDLLISKIYP 111
D ++ K+ P
Sbjct: 74 PDHTLQDIVYKLVP 87
>gi|407261547|ref|XP_003946296.1| PREDICTED: tripartite motif-containing protein 30A [Mus musculus]
Length = 513
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-----GNKECPTCRKKLVSKRSLRA 98
E+ CPICL++LK+ ++T +C H FC CII S G CP CR + + +LR
Sbjct: 13 EVTCPICLELLKEPVST-DCGHSFCQTCIILNYVSNRRMDGVGSCPVCRVGYLFE-NLRP 70
Query: 99 DPNFDLLISKI 109
+ N ++ +I
Sbjct: 71 NQNMINIVKRI 81
>gi|449270808|gb|EMC81459.1| RING finger protein 4, partial [Columba livia]
Length = 190
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 45 LMCPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
+ CPIC+D + + + +C H FCS C+ +LR+ N CPTCRKKL ++
Sbjct: 130 VSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANS-CPTCRKKLTHRQ 184
>gi|12850768|dbj|BAB28846.1| unnamed protein product [Mus musculus]
Length = 178
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
CP+C ++LK + T C H FC C +TA+R CP CR V++R RA P L
Sbjct: 4 FYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGS-VTRRE-RACPERGL 61
Query: 105 LISKI 109
+ I
Sbjct: 62 DLENI 66
>gi|449442949|ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 451
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLR 97
L + + CP+C +LK+ T CLH FC CI L + CP C L + LR
Sbjct: 13 LEACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDDEVDCCPVCDIDLGCLPVEKLR 72
Query: 98 ADPNFDLLISKIYP-SRDEYEAHQVRVLEKL---NKSHSQAALVQSINEGIKLQSQHRLQ 153
D N + +KI+P R + A ++ L L K S ++LV + + + +QS
Sbjct: 73 PDHNLQDIRAKIFPLKRRKICAPEISPLASLPVKRKERSLSSLVVNTPK-VSMQSGGLTG 131
Query: 154 RTKKNI 159
R KN+
Sbjct: 132 RRSKNV 137
>gi|356533743|ref|XP_003535419.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 436
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSK--RSLRADPN 101
+ CP+C + T EC H FC +C+ L K CP C + L LR DP
Sbjct: 31 VTCPLCNKFFRNATTISECCHSFCRECVDKKLIDEKLKHCPICNRDLGCSPHDKLRPDPC 90
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLN 128
L KI+P ++ + ++ + K N
Sbjct: 91 LQDLRDKIFPLEEQNASVKLNINRKKN 117
>gi|326919491|ref|XP_003206014.1| PREDICTED: e3 ubiquitin ligase RNF4-like isoform 1 [Meleagris
gallopavo]
Length = 194
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 47 CPICLDML------KKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + +C H FCS C+ +LR+ N CPTCRKKL ++
Sbjct: 136 CPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANS-CPTCRKKLTHRQ 188
>gi|224035081|gb|ACN36616.1| unknown [Zea mays]
gi|414591242|tpg|DAA41813.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 384
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+I A K CP CR+ + + RS +
Sbjct: 156 LREELSCAICLEICFEPTTT-SCGHSFCMKCLIHAASKCGKRCPKCRQFISNSRSCTINT 214
Query: 101 NFDLLISKIYPSRDEYEAHQ 120
I ++P E EA +
Sbjct: 215 VLWNTIQLLFPG--EVEARK 232
>gi|221220814|gb|ACM09068.1| RING finger protein 4 [Salmo salar]
Length = 187
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 39 RSLHSELMCPICLDMLK------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
RS + CPIC+D +T+ + +C H FC+ CI +L + ++ CPTCRKKL
Sbjct: 121 RSTPKTISCPICMDTFGEIIDGGRTLVSSQCGHLFCNTCIHDSL-AKSQTCPTCRKKL 177
>gi|147772496|emb|CAN60778.1| hypothetical protein VITISV_032146 [Vitis vinifera]
Length = 391
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 34 IAVSPRS-LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL- 90
+A PR L + + C IC + T ECLH FC CI + + CP C L
Sbjct: 5 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 64
Query: 91 -VSKRSLRADPNFDLLISKIYPS 112
LR D N L +KI+PS
Sbjct: 65 CAPLEKLRPDHNLQDLTAKIFPS 87
>gi|432112052|gb|ELK35080.1| Protein deltex-3 [Myotis davidii]
Length = 340
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E CPICL ++ T ++C H FC CI AL+ K CP C + + N
Sbjct: 154 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC-GRFYGQLVGNQPQNGR 211
Query: 104 LLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
+L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 212 MLVSKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCP 266
Query: 160 QGNE 163
+GN+
Sbjct: 267 EGNK 270
>gi|309268912|ref|XP_485980.5| PREDICTED: tripartite motif-containing protein 30A [Mus musculus]
Length = 513
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-----GNKECPTCRKKLVSKRSLRA 98
E+ CPICL++LK+ ++T +C H FC CII S G CP CR + + +LR
Sbjct: 13 EVTCPICLELLKEPVST-DCGHSFCQTCIILNYVSNRRMDGVGSCPVCRVGYLFE-NLRP 70
Query: 99 DPNFDLLISKI 109
+ N ++ +I
Sbjct: 71 NQNMINIVKRI 81
>gi|255547323|ref|XP_002514719.1| kinase, putative [Ricinus communis]
gi|223546323|gb|EEF47825.1| kinase, putative [Ricinus communis]
Length = 1646
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRADPNF 102
E C +CL +L + +TT C H FC C+ ++ GNK CP CR L +S R+
Sbjct: 196 EFDCTLCLKLLYEPVTTP-CGHSFCRSCLFQSMDRGNK-CPLCRTVLFISPRTCSVSVTL 253
Query: 103 DLLISKIYPSRDEY 116
+ +I K +P +EY
Sbjct: 254 NNIIQKNFP--EEY 265
>gi|260828987|ref|XP_002609444.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
gi|229294800|gb|EEN65454.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
Length = 584
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNF 102
++ +CPIC DM+++ TK C H FC CI +L N+ CP C V +++ + PNF
Sbjct: 31 NDFVCPICFDMIEEAHMTK-CGHSFCFKCIQQSLEESNR-CPKC--NFVIEKTDQIFPNF 86
Query: 103 DL 104
L
Sbjct: 87 LL 88
>gi|414587881|tpg|DAA38452.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 384
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L EL C ICL++ + TT C H FC C+I A K CP CR+ + + RS +
Sbjct: 156 LREELSCAICLEICFEPTTT-SCGHSFCMKCLIHAASKCGKRCPKCRQFISNSRSCTINT 214
Query: 101 NFDLLISKIYPSRDEYEAHQ 120
I ++P E EA +
Sbjct: 215 VLWNTIQLLFPG--EVEARK 232
>gi|297812401|ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
lyrata]
gi|297319921|gb|EFH50343.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
lyrata]
Length = 1029
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVSKRSLRADP 100
CPICL+ + + T C HR C +C++ + R+ N CP CRK VSK+ L P
Sbjct: 794 CPICLEAFEDAVLTP-CAHRLCRECLLASWRNSNTGLCPVCRKT-VSKQELITAP 846
>gi|71043375|gb|AAZ20649.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 907
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|395540787|ref|XP_003772332.1| PREDICTED: probable E3 ubiquitin-protein ligase DTX3 [Sarcophilus
harrisii]
Length = 351
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK---KLVSKRSLRADPNFD 103
CPICL ++ T ++C H FC CI AL+ K CP C + +LV + N
Sbjct: 168 CPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGRFYGQLVGNQPQ----NGR 222
Query: 104 LLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
+L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 223 MLVSKDASLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCP 277
Query: 160 QGNE 163
+GN+
Sbjct: 278 EGNK 281
>gi|328793199|ref|XP_397419.4| PREDICTED: hypothetical protein LOC413984 [Apis mellifera]
Length = 1395
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ +L C +C T ECLH FC CI+ L NK CP C ++ + L R
Sbjct: 15 LNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLLNIR 73
Query: 98 ADPNFDLLISKIYPS 112
D ++ K+ P
Sbjct: 74 PDHTLQDIVYKLVPG 88
>gi|320037692|gb|EFW19629.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Coccidioides posadasii str. Silveira]
Length = 411
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 28 ITDNTEIAVSPRS----LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
I D+T+ +P S + S L C +C D+ K +TT C H FCS CI L S + +C
Sbjct: 7 IPDSTDWLSTPLSGLSRVESALRCQVCKDLFKNPVTTS-CCHTFCSICIRRCL-SADGKC 64
Query: 84 PTCR 87
PTCR
Sbjct: 65 PTCR 68
>gi|392870027|gb|EAS28575.2| DNA repair protein rad18 [Coccidioides immitis RS]
Length = 411
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 28 ITDNTEIAVSPRS----LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
I D+T+ +P S + S L C +C D+ K +TT C H FCS CI L S + +C
Sbjct: 7 IPDSTDWLSTPLSGLSRVESALRCQVCKDLFKNPVTTS-CCHTFCSICIRRCL-SADGKC 64
Query: 84 PTCR 87
PTCR
Sbjct: 65 PTCR 68
>gi|395835310|ref|XP_003790625.1| PREDICTED: probable E3 ubiquitin-protein ligase DTX3 isoform 1
[Otolemur garnettii]
Length = 347
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLI 106
CPICL ++ T ++C H FC CI AL+ K CP C + + N +L+
Sbjct: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC-GRFYGQLVGNQPQNGRMLV 221
Query: 107 SK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGN 162
SK + PS YE + V++ + Q A + N G++ R+ +GN
Sbjct: 222 SKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCPEGN 276
Query: 163 E 163
+
Sbjct: 277 K 277
>gi|55742258|ref|NP_001007159.1| polycomb group RING finger protein 1 [Danio rerio]
gi|82209850|sp|Q7ZYZ7.1|PCGF1_DANRE RecName: Full=Polycomb group RING finger protein 1
gi|126631863|gb|AAI34013.1| Polycomb group ring finger 1 [Danio rerio]
Length = 261
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 28 ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
+ + E+ + + L+ ++C +C T ECLH FC CI+ L++ +K CP C
Sbjct: 26 LRNEEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPMCN 84
Query: 88 KKLVSKR---SLRADPNFDLLISKIYPSRDE------YEAHQVRVLEKL 127
K+ + +L+ D ++ K+ P E E +Q R LE++
Sbjct: 85 IKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKEFYQSRGLERI 133
>gi|356535179|ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 450
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL-- 90
+ V +L + CP+C + K T CLH FC CI L + CP C L
Sbjct: 7 VKVKRDTLRPCMTCPLCHNFFKDATTISTCLHTFCRKCIYEKLSDEETDCCPVCNIDLGC 66
Query: 91 VSKRSLRADPNFDLLISKIYP-SRDEYEAHQVR---VLEKLNKSHSQAALVQSINEGIKL 146
+ LR D N + +KI+P R + +A +V L K S ++LV S + + +
Sbjct: 67 LPVEKLRPDHNLHDIRAKIFPFKRKKIKAQEVLSSISLPAKRKERSLSSLVVSAPK-VSM 125
Query: 147 QSQHRLQRTK 156
Q +RTK
Sbjct: 126 QPGFTGKRTK 135
>gi|350406994|ref|XP_003487947.1| PREDICTED: hypothetical protein LOC100746010 [Bombus impatiens]
Length = 2185
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MT T Q + + Y+ + + + + E A+ + +L+C IC D+L +
Sbjct: 468 MTPTGQYAVP-AIDHQAYKEGKKERPPFSQDPEPAIEKPEIPEDLLCNICKDLLTDAVMI 526
Query: 61 KECLHRFCSDCIITA-LRSGNKECPTCRKKLVSKRSL 96
C + FC +CI T L S ECP C +K VS +L
Sbjct: 527 PCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETL 563
>gi|410902597|ref|XP_003964780.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 459
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
+LMCPIC ++ M C H FC C+ +G +ECP CRKK+
Sbjct: 7 DLMCPICYEIFTDPMLLP-CSHSFCRGCLKRCWDTGLRECPVCRKKV 52
>gi|255647385|gb|ACU24158.1| unknown [Glycine max]
Length = 206
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL 96
CPIC+ L + M+T+ C H FC +CI A+ + K CPTCRKK V+K SL
Sbjct: 151 CPICMSPLVEEMSTR-CGHIFCKNCIRAAIFAQAK-CPTCRKK-VTKNSL 197
>gi|397570795|gb|EJK47466.1| hypothetical protein THAOC_33807, partial [Thalassiosira oceanica]
Length = 394
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 29 TDNTEIA-VSPRSLHSELM-----------CPICLDMLKKTMTTKE-----CLHRFCSDC 71
D TE A S RSLH L+ C IC D+++ M C+ C+ C
Sbjct: 144 ADTTESADQSARSLHHRLLTSGHERPEGDACSICFDLIELPMNEHSKMNVCCMKTLCNGC 203
Query: 72 IITALRSG-NKECPTCRKKLVSKRSLR 97
I+ A R G N CP CR L S+R ++
Sbjct: 204 ILAAQRRGMNDRCPFCRTPLTSRRCIQ 230
>gi|255551951|ref|XP_002517020.1| ring finger protein, putative [Ricinus communis]
gi|223543655|gb|EEF45183.1| ring finger protein, putative [Ricinus communis]
Length = 434
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS 92
+ V L + + CP+C + + T ECLH FC CI + + CP C L
Sbjct: 8 VKVEREKLETCMTCPLCNKLFRDATTISECLHTFCRKCIYRKITDEEFDNCPVCNIDLGC 67
Query: 93 K--RSLRADPNFDLLISKIYPSR 113
LRAD + + L +K +PS+
Sbjct: 68 SPLEKLRADHSLEDLKTKFFPSK 90
>gi|71043366|gb|AAZ20645.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 375
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRSLRA 98
+++ ++C +C L T ECLH FC C+I LR + CP C + +K ++++
Sbjct: 256 AVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKS 314
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E E + R K
Sbjct: 315 DTTLQAIVYKLVPGLYERELMRKRAFYK 342
>gi|3928084|gb|AAC79610.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 689
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 42 HSELM--CPICLDMLKK----TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
HS + C ICL+ +K+ + T EC H F CI + ++ GN+ CP CR K K
Sbjct: 62 HSPFLRTCSICLNKMKEGGGHALFTAECSHSFHFHCIASNVKHGNQVCPVCRAKW--KEI 119
Query: 96 LRADPNFDL--LISKIY 110
P+FDL L ++ Y
Sbjct: 120 PMQHPSFDLPYLFARSY 136
>gi|109240538|ref|NP_116062.2| polycomb group RING finger protein 1 [Homo sapiens]
gi|114578279|ref|XP_515562.2| PREDICTED: polycomb group RING finger protein 1 [Pan troglodytes]
gi|397478066|ref|XP_003810379.1| PREDICTED: polycomb group RING finger protein 1 [Pan paniscus]
gi|426336056|ref|XP_004029520.1| PREDICTED: polycomb group RING finger protein 1 [Gorilla gorilla
gorilla]
gi|223590124|sp|Q9BSM1.2|PCGF1_HUMAN RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|119620038|gb|EAW99632.1| polycomb group ring finger 1, isoform CRA_a [Homo sapiens]
gi|410217414|gb|JAA05926.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410254064|gb|JAA14999.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410290162|gb|JAA23681.1| polycomb group ring finger 1 [Pan troglodytes]
Length = 259
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
>gi|426250664|ref|XP_004019054.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Ovis aries]
Length = 574
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-----CPTCRKKLVSKRS 95
L E++CPIC+D+L+ T +C H FC CI +SG E CP C K+V + +
Sbjct: 10 LQEEVICPICMDILQHPATI-DCGHNFCLSCIT---QSGEAEDSVLKCPLC-NKIVRRDT 64
Query: 96 LRADPNFDL--LISKIY---PSRDEYEAHQVRVLEKLNKSH 131
+ PN+ L L+ KI PS + E ++R L K H
Sbjct: 65 I--TPNWLLVNLVEKIQSMEPSEMQPETEELRCLRHGEKCH 103
>gi|354543533|emb|CCE40252.1| hypothetical protein CPAR2_102900 [Candida parapsilosis]
Length = 422
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSKRSL------- 96
L C IC +++ MTT EC H FC +C+ + NK CPTCR ++ +K +L
Sbjct: 29 LECSICSEIMLAPMTT-ECGHSFCYECLHQWFQ--NKINCPTCRHEIQTKPALNMKLNDV 85
Query: 97 -----------RADPNFDLLISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALVQS 139
R DPN D ++ + +YE+H + RV +L +S A + S
Sbjct: 86 SKSLAELIIDARLDPNVDSFRARKKDAMSKYESHAKKKRVFGELFCGYSLALIDDS 141
>gi|321455745|gb|EFX66870.1| hypothetical protein DAPPUDRAFT_302409 [Daphnia pulex]
Length = 919
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---R 97
L+ L C +C + T ECLH FC CI+ L + NK CP C ++ + L R
Sbjct: 12 LNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYLET-NKFCPVCEVQVHKTKPLLNIR 70
Query: 98 ADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSH 131
+D ++ K+ P + H++R+ + H
Sbjct: 71 SDQTLQDIVYKLVPGLFQ---HEMRLRREFYSKH 101
>gi|297667281|ref|XP_002811904.1| PREDICTED: polycomb group RING finger protein 1 [Pongo abelii]
gi|332239108|ref|XP_003268747.1| PREDICTED: polycomb group RING finger protein 1 [Nomascus
leucogenys]
gi|402891319|ref|XP_003908897.1| PREDICTED: polycomb group RING finger protein 1 [Papio anubis]
gi|355565816|gb|EHH22245.1| hypothetical protein EGK_05474 [Macaca mulatta]
gi|355751439|gb|EHH55694.1| hypothetical protein EGM_04947, partial [Macaca fascicularis]
gi|380783643|gb|AFE63697.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|383411057|gb|AFH28742.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|384942650|gb|AFI34930.1| polycomb group RING finger protein 1 [Macaca mulatta]
Length = 259
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
>gi|410902163|ref|XP_003964564.1| PREDICTED: uncharacterized protein LOC101079360 [Takifugu rubripes]
Length = 1228
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVSKRSLRAD 99
EL+C IC +ML + C + FC DCI TAL ++ CPTC++ VS +L A+
Sbjct: 259 ELLCLICKEMLTDAVVIPCCGNSFCDDCIRTALLDSDQHTCPTCKQSEVSPDTLIAN 315
>gi|343797209|gb|AEM64001.1| ICP0 [Suid herpesvirus 1]
gi|343797279|gb|AEM64070.1| ICP0 [Suid herpesvirus 1]
Length = 367
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
CPICLD+ T C+H+FC DCI +S + CP C+ ++ S
Sbjct: 3 CPICLDVAATEAQTLPCMHKFCLDCIQRWTQS-STACPLCKARVTS 47
>gi|303314713|ref|XP_003067365.1| postreplication repair protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240107033|gb|EER25220.1| postreplication repair protein, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 405
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 28 ITDNTEIAVSPRS----LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
I D+T+ +P S + S L C +C D+ K +TT C H FCS CI L S + +C
Sbjct: 7 IPDSTDWLSTPLSGLSRVESALRCQVCKDLFKNPVTTS-CCHTFCSICIRRCL-SADGKC 64
Query: 84 PTCR 87
PTCR
Sbjct: 65 PTCR 68
>gi|426223979|ref|XP_004006151.1| PREDICTED: polycomb group RING finger protein 1 [Ovis aries]
gi|440896445|gb|ELR48364.1| Polycomb group RING finger protein 1 [Bos grunniens mutus]
Length = 259
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
>gi|353703796|ref|NP_001238838.1| E3 ubiquitin ligase RNF4 [Pan troglodytes]
gi|410218072|gb|JAA06255.1| ring finger protein 4 [Pan troglodytes]
gi|410255556|gb|JAA15745.1| ring finger protein 4 [Pan troglodytes]
gi|410298758|gb|JAA27979.1| ring finger protein 4 [Pan troglodytes]
Length = 190
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDML------KKTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FC+ C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCNQCLRDSLKNANT-CPTCRKKINHKR 184
>gi|296223494|ref|XP_002757636.1| PREDICTED: polycomb group RING finger protein 1 [Callithrix
jacchus]
gi|403260331|ref|XP_003922629.1| PREDICTED: polycomb group RING finger protein 1 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
>gi|242019086|ref|XP_002429997.1| protein C9orf39, putative [Pediculus humanus corporis]
gi|212515052|gb|EEB17259.1| protein C9orf39, putative [Pediculus humanus corporis]
Length = 1232
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL-RSGNKECPTCR 87
L + LMC IC D+L K ++T C H FC+DCI T L N CP C+
Sbjct: 20 LLNSLMCSICHDLLLKPLST-PCGHYFCNDCIKTFLFDKNNSGCPLCK 66
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.123 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,758,840,988
Number of Sequences: 23463169
Number of extensions: 184151270
Number of successful extensions: 1036402
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 9332
Number of HSP's that attempted gapping in prelim test: 1016924
Number of HSP's gapped (non-prelim): 23901
length of query: 321
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 179
effective length of database: 9,027,425,369
effective search space: 1615909141051
effective search space used: 1615909141051
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)