Your job contains 1 sequence.
>psy17011
MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ
VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENTPDISNTDQTSVQQQ
PSPQPTTSNAIKNQLSPAVPKSPEARPSSAASSSTTKVSKKTAKSDVMTSELETDDTSET
DDKISTVESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQ
IHDKYWKSEKPLEVYYSWKKV
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17011
(321 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 652 3.5e-84 2
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 655 1.9e-77 3
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 652 3.9e-77 3
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 652 3.9e-77 3
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 652 3.9e-77 3
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 647 1.3e-76 3
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 664 7.5e-76 2
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 646 1.6e-75 2
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 646 2.5e-75 2
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 645 3.2e-75 2
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 645 3.2e-75 2
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 645 3.2e-75 2
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 645 3.2e-75 2
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 640 2.3e-74 2
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 636 2.9e-74 2
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 645 4.7e-74 2
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 582 1.9e-68 3
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 568 2.5e-68 3
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 568 2.5e-68 3
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 568 2.5e-68 3
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 568 2.5e-68 3
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 645 9.8e-68 2
UNIPROTKB|B3KRH1 - symbol:RNF2 "Ring finger protein 2, is... 334 1.8e-42 2
WB|WBGene00020496 - symbol:spat-3 species:6239 "Caenorhab... 190 9.6e-12 2
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 127 7.8e-08 1
UNIPROTKB|J3QKM8 - symbol:RNF138 "E3 ubiquitin-protein li... 127 7.8e-08 1
UNIPROTKB|F1LUN6 - symbol:F1LUN6 "Uncharacterized protein... 127 7.8e-08 1
UNIPROTKB|F1PAI7 - symbol:BRCA1 "Breast cancer type 1 sus... 154 1.2e-07 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 139 1.2e-07 1
UNIPROTKB|H0YAI5 - symbol:RNF4 "E3 ubiquitin-protein liga... 124 1.7e-07 1
UNIPROTKB|F1MM90 - symbol:PCGF1 "Polycomb group RING fing... 128 2.2e-07 2
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 107 2.7e-07 2
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 122 2.8e-07 1
UNIPROTKB|F1MYX8 - symbol:BRCA1 "Breast cancer type 1 sus... 150 3.2e-07 1
UNIPROTKB|Q864U1 - symbol:BRCA1 "Breast cancer type 1 sus... 150 3.2e-07 1
UNIPROTKB|Q95153 - symbol:BRCA1 "Breast cancer type 1 sus... 150 3.3e-07 1
UNIPROTKB|Q3B891 - symbol:BRCA1 "Breast cancer type 1 sus... 143 3.5e-07 1
UNIPROTKB|Q2YDF9 - symbol:PCGF1 "Polycomb group RING fing... 126 4.0e-07 2
POMBASE|SPCC548.05c - symbol:SPCC548.05c "ubiquitin-prote... 142 4.4e-07 1
UNIPROTKB|F1SNT4 - symbol:F1SNT4 "Uncharacterized protein... 126 5.1e-07 2
UNIPROTKB|E7EWN5 - symbol:BRCA1 "Breast cancer type 1 sus... 143 5.7e-07 1
UNIPROTKB|E2R984 - symbol:PCGF1 "Uncharacterized protein"... 128 5.7e-07 2
UNIPROTKB|Q9BSM1 - symbol:PCGF1 "Polycomb group RING fing... 128 5.7e-07 2
UNIPROTKB|G3XAC3 - symbol:BRCA1 "Breast cancer 1, early o... 143 6.0e-07 1
RGD|1549782 - symbol:Pcgf1 "polycomb group ring finger 1"... 128 6.1e-07 2
UNIPROTKB|Q6DLV9 - symbol:Pcgf1 "Polycomb group RING fing... 128 6.1e-07 2
UNIPROTKB|E7ETR2 - symbol:BRCA1 "Breast cancer 1, early o... 143 7.0e-07 1
RGD|621485 - symbol:Rnf138 "ring finger protein 138, E3 u... 131 8.6e-07 1
UNIPROTKB|Q99PD2 - symbol:Rnf138 "E3 ubiquitin-protein li... 131 8.6e-07 1
MGI|MGI:1917087 - symbol:Pcgf1 "polycomb group ring finge... 128 9.1e-07 2
UNIPROTKB|G3V8S5 - symbol:Brca1 "RCG34321, isoform CRA_a"... 145 1.2e-06 1
UNIPROTKB|Q6J6I9 - symbol:BRCA1 "Breast cancer type 1 sus... 145 1.2e-06 1
ZFIN|ZDB-GENE-030616-605 - symbol:pcgf1 "polycomb group r... 125 1.3e-06 2
UNIPROTKB|E7EUM2 - symbol:BRCA1 "Breast cancer type 1 sus... 139 1.5e-06 1
UNIPROTKB|Q6J6J0 - symbol:BRCA1 "Breast cancer type 1 sus... 144 1.6e-06 1
UNIPROTKB|C9J3G7 - symbol:PCGF3 "Polycomb group RING fing... 115 1.7e-06 1
UNIPROTKB|F8W8H7 - symbol:BRCA1 "Breast cancer type 1 sus... 143 1.7e-06 1
UNIPROTKB|E7EMP0 - symbol:BRCA1 "Breast cancer type 1 sus... 143 1.8e-06 1
TAIR|locus:2158705 - symbol:RING1A "RING 1A" species:3702... 137 2.0e-06 1
RGD|2218 - symbol:Brca1 "breast cancer 1, early onset" sp... 143 2.0e-06 1
UNIPROTKB|P38398 - symbol:BRCA1 "Breast cancer type 1 sus... 143 2.1e-06 1
UNIPROTKB|Q9GKK8 - symbol:BRCA1 "Breast cancer type 1 sus... 143 2.1e-06 1
UNIPROTKB|E9PFC7 - symbol:BRCA1 "Breast cancer type 1 sus... 143 2.1e-06 1
TAIR|locus:2098505 - symbol:AT3G07200 species:3702 "Arabi... 124 2.2e-06 1
MGI|MGI:1201691 - symbol:Rnf4 "ring finger protein 4" spe... 126 2.3e-06 1
UNIPROTKB|Q6J6I8 - symbol:BRCA1 "Breast cancer type 1 sus... 142 2.7e-06 1
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 113 2.8e-06 1
UNIPROTKB|F1N8I5 - symbol:BRCA1 "Uncharacterized protein"... 141 3.2e-06 1
UNIPROTKB|Q32LN5 - symbol:RNF138 "E3 ubiquitin-protein li... 128 4.3e-06 1
UNIPROTKB|F1SAL6 - symbol:RNF138 "Uncharacterized protein... 128 4.3e-06 1
MGI|MGI:1929211 - symbol:Rnf138 "ring finger protein 138"... 128 4.3e-06 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 111 4.7e-06 1
UNIPROTKB|Q5T8Z4 - symbol:BMI1 "Polycomb complex protein ... 111 4.7e-06 1
UNIPROTKB|Q5T8Z6 - symbol:BMI1 "Polycomb complex protein ... 111 4.7e-06 1
ZFIN|ZDB-GENE-080723-33 - symbol:pcgf5a "polycomb group r... 127 4.7e-06 1
TAIR|locus:2033103 - symbol:DRIP1 "DREB2A-interacting pro... 132 5.2e-06 1
UNIPROTKB|I3LDV4 - symbol:I3LDV4 "Uncharacterized protein... 126 5.2e-06 2
UNIPROTKB|Q8WVD3 - symbol:RNF138 "E3 ubiquitin-protein li... 127 5.6e-06 1
UNIPROTKB|Q5T8Z5 - symbol:BMI1 "Polycomb complex protein ... 110 6.1e-06 1
RGD|1562871 - symbol:RGD1562871 "similar to BMI1-like pro... 126 6.2e-06 1
UNIPROTKB|D6RA71 - symbol:RNF4 "E3 ubiquitin-protein liga... 122 6.2e-06 1
UNIPROTKB|F5H1U2 - symbol:RNF4 "E3 ubiquitin-protein liga... 122 6.8e-06 1
UNIPROTKB|P78317 - symbol:RNF4 "E3 ubiquitin-protein liga... 122 6.8e-06 1
UNIPROTKB|F1S8Q2 - symbol:RNF4 "Uncharacterized protein" ... 122 6.8e-06 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 109 7.8e-06 1
TAIR|locus:505006682 - symbol:AT5G48655 species:3702 "Ara... 123 7.9e-06 1
UNIPROTKB|I3L7C9 - symbol:BRCA1 "Uncharacterized protein"... 137 9.9e-06 1
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 108 1.0e-05 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 108 1.0e-05 1
UNIPROTKB|Q1L721 - symbol:rnf138 "E3 ubiquitin-protein li... 123 1.2e-05 1
UNIPROTKB|F1PC91 - symbol:RNF4 "Uncharacterized protein" ... 120 1.2e-05 1
UNIPROTKB|C9JYD0 - symbol:PCGF3 "Polycomb group RING fing... 107 1.3e-05 1
UNIPROTKB|E1B7M2 - symbol:TRIM31 "Uncharacterized protein... 127 1.3e-05 1
UNIPROTKB|J9NS55 - symbol:RNF4 "Uncharacterized protein" ... 120 1.3e-05 1
FB|FBgn0037384 - symbol:dgrn "degringolade" species:7227 ... 126 1.5e-05 1
UNIPROTKB|F1PF91 - symbol:RNF4 "Uncharacterized protein" ... 120 1.5e-05 1
UNIPROTKB|Q4QR06 - symbol:pcgf1 "Polycomb group RING fing... 124 1.5e-05 1
UNIPROTKB|Q6NRG0 - symbol:rnf8-b "E3 ubiquitin-protein li... 129 1.7e-05 1
UNIPROTKB|F1NCS0 - symbol:F1NCS0 "Uncharacterized protein... 106 1.7e-05 1
UNIPROTKB|B0V1M0 - symbol:TRIM31 "E3 ubiquitin-protein li... 123 1.8e-05 1
WARNING: Descriptions of 144 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 652 (234.6 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 126/154 (81%), Positives = 138/154 (89%)
Query: 1 MTSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT 60
MTS + + K+WELS+YEL R PQE ITD+TEIAVSPRSLHSELMCPICLDMLKKTMTT
Sbjct: 1 MTSLDPA-PNKTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTT 59
Query: 61 KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQ 120
KECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR+EYEA Q
Sbjct: 60 KECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQ 119
Query: 121 VRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQR 154
+V+ K N++ SQ ALV SINEGIKLQSQ+R QR
Sbjct: 120 EKVMAKFNQTQSQQALVNSINEGIKLQSQNRPQR 153
Score = 210 (79.0 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-GSDICDS----NFGIYVSPSSNNFILLPGNQSLRQI 301
+++ + VDHL+KYL MRL L+ G+D+ ++ NF IYV+P ++L GNQ+L Q+
Sbjct: 356 IKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFCIYVAPQPQQLVILNGNQTLHQV 415
Query: 302 HDKYWKSEKPLEVYYSWKK 320
+DK+WK KP+E+YYSWKK
Sbjct: 416 NDKFWKVNKPMEMYYSWKK 434
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 655 (235.6 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 121/165 (73%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ I G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTT 167
Score = 96 (38.9 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
Score = 60 (26.2 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 284 VKTTGNATVDHLSKYLALRIALE 306
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 652 (234.6 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 96 (38.9 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
Score = 60 (26.2 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 284 VKTTGNATVDHLSKYLALRIALE 306
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 652 (234.6 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 96 (38.9 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
Score = 60 (26.2 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 284 VKTTGNATVDHLSKYLALRIALE 306
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 652 (234.6 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++ T
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTT 167
Score = 96 (38.9 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
Score = 60 (26.2 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 284 VKTTGNATVDHLSKYLALRIALE 306
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 647 (232.8 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 119/163 (73%), Positives = 139/163 (85%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T +K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTK
Sbjct: 3 TPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTK 62
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQV 121
ECLHRFCSDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 122 RVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEE 164
RVL +L++ H+Q AL SI EG+++Q+ HR QR ++ + G+++
Sbjct: 123 RVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQ 165
Score = 96 (38.9 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 353 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
Score = 60 (26.2 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 284 VKTTGNATVDHLSKYLALRIALE 306
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 664 (238.8 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 125/158 (79%), Positives = 139/158 (87%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 SSKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 69
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KLN
Sbjct: 70 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLN 129
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
+ H+Q AL SI EG+K+Q+ HR QR +K+ Q +NT
Sbjct: 130 RLHNQQALSSSIEEGLKMQAMHRAQRVRKH-QHESDNT 166
Score = 119 (46.9 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE---------G---SDICDSNFGIYVSP--SSNNFILL 292
V++ + VDHL+KYL +R+ LE G ++ + + IY+ + + L
Sbjct: 254 VKTTANATVDHLSKYLALRIALEEEVLRGEAEGVTLGEVSEKQYTIYICTGVAGGQYTTL 313
Query: 293 PGNQSLRQIHDKYWKSEKPLEVYYS 317
G+ +L +++KYWK KPLE+YY+
Sbjct: 314 NGSLTLELVNEKYWKVSKPLELYYA 338
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 646 (232.5 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 128/173 (73%), Positives = 143/173 (82%)
Query: 1 MTSTEQSG----TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK 56
MT T Q+ +K+WELS+YEL RTPQEAITD EIAVSPRSLHSELMCPICLDMLK
Sbjct: 1 MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN 60
Query: 57 TMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEY 116
TMTTKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEY
Sbjct: 61 TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
EAHQ RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 121 EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDN 173
Score = 134 (52.2 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-------GSDI-----CDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE S I + + IY+ +SN F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQYTIYIPTASNQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+Y++
Sbjct: 308 SFSLELVSEKYWKVNKPMELYFA 330
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 646 (232.5 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALCHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 132 (51.5 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 645 (232.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 132 (51.5 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 645 (232.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 132 (51.5 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 645 (232.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 132 (51.5 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 645 (232.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 132 (51.5 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 640 (230.4 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 125/170 (73%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQANGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL +++K ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 129 (50.5 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ ++ F +L G
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNG 307
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 308 SFSLELVSEKYWKVNKPMELYYA 330
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 636 (228.9 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 126/171 (73%), Positives = 142/171 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQH-RLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ + RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNSRLQRGKKQQIENGSGAEDN 174
Score = 132 (51.5 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 249 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 308
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 309 SFSLELVSEKYWKVNKPMELYYA 331
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 645 (232.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 123/158 (77%), Positives = 138/158 (87%)
Query: 9 TTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 68
++K+WELS+YEL+RTPQ AI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFC
Sbjct: 10 SSKTWELSLYELHRTPQ-AIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFC 68
Query: 69 SDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLN 128
SDCI+TALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAHQ RVL KL+
Sbjct: 69 SDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLS 128
Query: 129 KSHSQAALVQSINEGIKLQSQHRLQRTKKNIQGNEENT 166
+ H+Q AL SI EG+K+Q+ HR QR +K+ Q +NT
Sbjct: 129 RLHNQQALSSSIEEGLKMQAMHRAQRVRKH-QHESDNT 165
Score = 121 (47.7 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE------GSD------ICDSNFGIYV--SPSSNNFILL 292
V++ + VDHL+KYL +R+ LE G++ + + + IY+ + + L
Sbjct: 253 VKTTANATVDHLSKYLALRIALEEEALRGGAEGVTVGEVSEKQYTIYICTGAAGGQYTTL 312
Query: 293 PGNQSLRQIHDKYWKSEKPLEVYYS 317
G+ +L +++KYWK KPLE+YY+
Sbjct: 313 NGSLTLELVNEKYWKISKPLELYYA 337
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 582 (209.9 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 108/142 (76%), Positives = 124/142 (87%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
QEAI D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECP
Sbjct: 1 QEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECP 60
Query: 85 TCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
TCRKKLVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+
Sbjct: 61 TCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGL 120
Query: 145 KLQSQHRLQRTKKNIQGNEENT 166
++Q+ HR QR ++ + G+++ T
Sbjct: 121 RMQAMHRAQRVRRPMPGSDQTT 142
Score = 83 (34.3 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+ K +PLE+ Y+
Sbjct: 329 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFGKVSRPLELCYA 376
Score = 60 (26.2 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 259 VKTTGNATVDHLSKYLALRIALE 281
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 568 (205.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 96 (38.9 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 371
Score = 60 (26.2 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 255 VKTTGNATVDHLSKYLALRIALE 277
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 568 (205.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 96 (38.9 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 371
Score = 60 (26.2 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 255 VKTTGNATVDHLSKYLALRIALE 277
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 568 (205.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 96 (38.9 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 371
Score = 60 (26.2 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 255 VKTTGNATVDHLSKYLALRIALE 277
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 568 (205.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 105/137 (76%), Positives = 120/137 (87%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
D TEIAVSPRSLHSELMCPICLDMLK TMTTKECLHRFCSDCI+TALRSGNKECPTCRKK
Sbjct: 2 DGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKK 61
Query: 90 LVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LVSKRSLR DPNFD LISKIYPSR+EYEAHQ RVL +L++ H+Q AL SI EG+++Q+
Sbjct: 62 LVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 150 HRLQRTKKNIQGNEENT 166
HR QR ++ I G+++ T
Sbjct: 122 HRAQRVRRPIPGSDQTT 138
Score = 96 (38.9 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 268 LEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYWKSEKPLEVYYS 317
LEG + + + IY++P F L G+ +L +++K+WK +PLE+ Y+
Sbjct: 324 LEG--VSEKQYTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 371
Score = 60 (26.2 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
V++ + VDHL+KYL +R+ LE
Sbjct: 255 VKTTGNATVDHLSKYLALRIALE 277
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 645 (232.1 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 126/170 (74%), Positives = 142/170 (83%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAH 119
TKECLHRFC+DCIITALRSGNKECPTCRKKLVSKRSLR DPNFD LISKIYPSRDEYEAH
Sbjct: 64 TKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH 123
Query: 120 QVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKK----NIQGNEEN 165
Q RVL ++NK ++Q AL SI EG+K+Q+ +RLQR KK N G E+N
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDN 173
Score = 61 (26.5 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE 269
++++ + VDHL+KYL +RL LE
Sbjct: 248 IKTSGNATVDHLSKYLAVRLALE 270
>UNIPROTKB|B3KRH1 [details] [associations]
symbol:RNF2 "Ring finger protein 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 EMBL:CH471067 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL109865 HOGENOM:HOG000273917
HOVERGEN:HBG079942 UniGene:Hs.591490 HGNC:HGNC:10061 EMBL:AK091574
IPI:IPI00514074 SMR:B3KRH1 STRING:B3KRH1 Ensembl:ENST00000367509
UCSC:uc001grd.1 Uniprot:B3KRH1
Length = 264
Score = 334 (122.6 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 63/80 (78%), Positives = 70/80 (87%)
Query: 3 STEQSGT---TKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMT 59
+ + +GT +K+WELS+YEL RTPQEAITD EI VSPRSLHSELMCPICLDMLK TMT
Sbjct: 4 AVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMT 63
Query: 60 TKECLHRFCSDCIITALRSG 79
TKECLHRFC+DCIITALRSG
Sbjct: 64 TKECLHRFCADCIITALRSG 83
Score = 132 (51.5 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 247 VESATDGEVDHLTKYLTMRLRLE-----GSD-------ICDSNFGIYVSPSSNNFILLPG 294
++++ + VDHL+KYL +RL LE G + + IY++ +S F +L G
Sbjct: 176 IKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNG 235
Query: 295 NQSLRQIHDKYWKSEKPLEVYYS 317
+ SL + +KYWK KP+E+YY+
Sbjct: 236 SFSLELVSEKYWKVNKPMELYYA 258
>WB|WBGene00020496 [details] [associations]
symbol:spat-3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0033522 "histone H2A ubiquitination"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0045138
"tail tip morphogenesis" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IGI] [GO:0030334
"regulation of cell migration" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GeneTree:ENSGT00700000104720 GO:GO:0000003
GO:GO:0030334 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0045138
GO:GO:0040027 InterPro:IPR017907 GO:GO:0033522 EMBL:FO080372
RefSeq:NP_001024904.2 UniGene:Cel.19810 PRIDE:H2KYH3
EnsemblMetazoa:T13H2.5a GeneID:259704 KEGG:cel:CELE_T13H2.5
CTD:259704 WormBase:T13H2.5a OMA:MNPARME Uniprot:H2KYH3
Length = 2476
Score = 190 (71.9 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 15 LSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
L+ Y+ R + + + + C +C ++++ ++ TK+C HRFC CI+
Sbjct: 130 LNAYDAVRNKYNVLPGKSVCEADLQKVIGSFSCDVCQELIQGSIMTKKCGHRFCDQCILV 189
Query: 75 A-LRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSR 113
A +RSGN CPTCR+ L SKR L+ DP FD LI ++ SR
Sbjct: 190 AFMRSGNT-CPTCRQNLGSKRELQQDPRFDQLIYQVVESR 228
Score = 39 (18.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 117 EAHQVRVLEKLNKSHSQAALVQSIN 141
E+ Q+ V+E + S S+A L +S N
Sbjct: 1358 ESQQIPVIESIQSSTSEA-LKESEN 1381
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 127 (49.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
+++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 DLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGN-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 127 (49.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
+++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 DLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGN-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 127 (49.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 31/112 (27%), Positives = 46/112 (41%)
Query: 24 PQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
P+ +D E + + + C IC L T ECLH FC CI+ N+ C
Sbjct: 35 PEREGSDEEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-C 93
Query: 84 PTCR---KKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
P C + +LR DP ++ K+ +E E Q R K N+ +
Sbjct: 94 PKCNIIVHEAKPHNNLRMDPQLQNIVYKLVSGLEEKEKKQRREFYKENRGQT 145
>UNIPROTKB|F1PAI7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IEA] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0009048 "dosage compensation by inactivation of X
chromosome" evidence=IEA] [GO:0007098 "centrosome cycle"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000023190 Uniprot:F1PAI7
Length = 1882
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ +E ++ + N S + + + E + + QS R K+ Q
Sbjct: 80 SQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVSIIQSMGYRNRAKRLRQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PTLQET 150
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 139 (54.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + +
Sbjct: 140 SEPEN-PSLETS 150
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 124 (48.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 32/91 (35%), Positives = 45/91 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 17 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 72
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKRSL 96
FCS C+ +L++ N CPTCRKK+ KR L
Sbjct: 73 VFCSQCLRDSLKNANT-CPTCRKKINHKRLL 102
>UNIPROTKB|F1MM90 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 GeneTree:ENSGT00550000074463
IPI:IPI00687683 OMA:NEHIVCY EMBL:DAAA02030322
Ensembl:ENSBTAT00000022090 Uniprot:F1MM90
Length = 259
Score = 128 (50.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++QI +W
Sbjct: 192 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQIWLSHW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 107 (42.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS-----GNKECPTCRKKLVSKRS 95
+ E+ CPICL++LK+ ++T +C H FC CI S G CP CR + R+
Sbjct: 9 IKEEVTCPICLELLKEPVST-DCNHSFCRACITINYESNRNTEGEGSCPVCRVCYLF-RN 66
Query: 96 LRADPN 101
LR PN
Sbjct: 67 LR--PN 70
Score = 46 (21.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 125 EKLNKSHS-QAALVQSINEGIKLQSQHRLQRTKK 157
E+ + H + ALV+ ++ K++S+ R+Q TK+
Sbjct: 119 ERSQEHHGHKTALVEEVDHEYKVRSR-RIQETKQ 151
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 122 (48.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR--SGNKE-CPTCRKKLVSKRS 95
RSL E+ C ICLD L+ +T +C H FC C T +R SG++ CP C+K K +
Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI-DCGHVFCRSCT-TDVRPISGSRPVCPLCKKPF-KKEN 64
Query: 96 LRADPNFDLLI---SKIYPSRDEYEAHQVR----VLEKLNKSHSQAA-LVQSINEG---I 144
+R + ++ S + RD+ + Q + +L L K Q +V +G +
Sbjct: 65 IRPVWQLEKILNHLSTLRRDRDKIQGFQAKGEADILAALKKLQDQRQYIVAEFEQGHQFL 124
Query: 145 KLQSQHRLQRTKK 157
+ + +H L++ K
Sbjct: 125 REREEHLLEQLAK 137
>UNIPROTKB|F1MYX8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:2000620 "positive regulation
of histone H4-K16 acetylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044030 "regulation of DNA
methylation" evidence=IEA] [GO:0043009 "chordate embryonic
development" evidence=IEA] [GO:0035067 "negative regulation of
histone acetylation" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 IPI:IPI00687086 UniGene:Bt.14026
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN GO:GO:0043009 GO:GO:0009048 GO:GO:0007098
EMBL:DAAA02049201 Ensembl:ENSBTAT00000011616 ArrayExpress:F1MYX8
Uniprot:F1MYX8
Length = 1849
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ +E ++ N S + + + E + + QS R K+ Q
Sbjct: 80 SQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHLKEEVSIIQSMGYRNRAKRLWQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PTLQET 150
>UNIPROTKB|Q864U1 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:0005694 "chromosome"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISS]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=ISS] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006633
"fatty acid biosynthetic process" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 EMBL:AY077732 IPI:IPI00687086 RefSeq:NP_848668.1
UniGene:Bt.14026 ProteinModelPortal:Q864U1 SMR:Q864U1 STRING:Q864U1
PRIDE:Q864U1 GeneID:353120 KEGG:bta:353120 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 InParanoid:Q864U1 KO:K10605
OrthoDB:EOG42RD7C NextBio:20812700 InterPro:IPR025994 Pfam:PF12820
Uniprot:Q864U1
Length = 1849
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ +E ++ N S + + + E + + QS R K+ Q
Sbjct: 80 SQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHLKEEVSIIQSMGYRNRAKRLWQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PTLQET 150
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L R G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ +E ++ + N S + + + E + + QS R K+ Q
Sbjct: 80 SQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVSIIQSMGYRNRAKRLRQ 139
Query: 161 GNEEN 165
EN
Sbjct: 140 SEPEN 144
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|Q2YDF9 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC110242 IPI:IPI00687683 RefSeq:NP_001039912.2
UniGene:Bt.52040 ProteinModelPortal:Q2YDF9 GeneID:539040
KEGG:bta:539040 CTD:84759 InParanoid:Q2YDF9 KO:K11487
OrthoDB:EOG4894N6 NextBio:20877740 Uniprot:Q2YDF9
Length = 259
Score = 126 (49.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKRSL---RADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + L + D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNHKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 47 (21.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++QI +W
Sbjct: 192 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQIWLSHW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 142 (55.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 2 TSTEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T+ S T+ ++ S N ++ I D + + + + L CPIC + L++ TT
Sbjct: 40 TTFASSDATQMYKKSRISSNSENKKQIPDTKTLLETFQKIKKTLECPICTEALQRPFTT- 98
Query: 62 ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRS 95
C H +C +C++ L+ +K CPTCR+KL ++ S
Sbjct: 99 HCGHTYCYECLLNWLKE-SKSCPTCRQKLYTQPS 131
>UNIPROTKB|F1SNT4 [details] [associations]
symbol:F1SNT4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:CU468647
Ensembl:ENSSSCT00000009065 OMA:DVNPHIV Uniprot:F1SNT4
Length = 259
Score = 126 (49.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K+
Sbjct: 33 EVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIHE 91
Query: 93 KR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ +L+ D ++ K+ P + E ++R
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 46 (21.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL K L RL L +V +N +L P + +++QI W
Sbjct: 192 VRCSVRAEVRHLRKVLCHRLMLSPQ---------HVQLLFDNEVL-PDHMTMKQIWLSRW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|E2R984 [details] [associations]
symbol:PCGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
GeneTree:ENSGT00550000074463 CTD:84759 KO:K11487 OMA:NEHIVCY
EMBL:AAEX03010965 RefSeq:XP_532995.2 ProteinModelPortal:E2R984
Ensembl:ENSCAFT00000013424 GeneID:475785 KEGG:cfa:475785
Uniprot:E2R984
Length = 259
Score = 128 (50.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++QI W
Sbjct: 192 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQIWLSRW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>UNIPROTKB|Q9BSM1 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 HOVERGEN:HBG052826 EMBL:AC005041 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:84759 KO:K11487 OrthoDB:EOG4894N6
EMBL:AF087884 EMBL:BC004952 IPI:IPI00902987 IPI:IPI00921560
RefSeq:NP_116062.2 UniGene:Hs.316750 ProteinModelPortal:Q9BSM1
SMR:Q9BSM1 IntAct:Q9BSM1 MINT:MINT-1460887 STRING:Q9BSM1
PhosphoSite:Q9BSM1 DMDM:223590124 PRIDE:Q9BSM1 DNASU:84759
Ensembl:ENST00000233630 GeneID:84759 KEGG:hsa:84759 UCSC:uc002sly.3
GeneCards:GC02M074732 HGNC:HGNC:17615 HPA:HPA011356 MIM:610231
neXtProt:NX_Q9BSM1 PharmGKB:PA134976631 InParanoid:Q9BSM1
OMA:NEHIVCY ChiTaRS:PCGF1 GenomeRNAi:84759 NextBio:74901
Bgee:Q9BSM1 CleanEx:HS_PCGF1 Genevestigator:Q9BSM1 Uniprot:Q9BSM1
Length = 259
Score = 128 (50.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++QI W
Sbjct: 192 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQIWLSRW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>RGD|1549782 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA;ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 128 (50.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 14 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 72
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 73 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 112
Score = 41 (19.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++Q+ W
Sbjct: 176 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQLWLSRW 225
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 226 FGKPSPLLLQYSVKE 240
>UNIPROTKB|Q6DLV9 [details] [associations]
symbol:Pcgf1 "Polycomb group RING finger protein 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 128 (50.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 14 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 72
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 73 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 112
Score = 41 (19.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++Q+ W
Sbjct: 176 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQLWLSRW 225
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 226 FGKPSPLLLQYSVKE 240
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 143 (55.4 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>RGD|621485 [details] [associations]
symbol:Rnf138 "ring finger protein 138, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
RGD:621485 Prosite:PS00518 GO:GO:0016055 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 HOVERGEN:HBG074331
CTD:51444 KO:K10668 EMBL:AF315468 EMBL:BC061821 IPI:IPI00200841
RefSeq:NP_446040.1 UniGene:Rn.6814 ProteinModelPortal:Q99PD2
GeneID:94196 KEGG:rno:94196 NextBio:617854 Genevestigator:Q99PD2
Uniprot:Q99PD2
Length = 209
Score = 131 (51.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 ELSADTSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGS-VT 62
Query: 93 KRSLRADPN--FDL--LISKIYPS----RDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
+R RA P DL ++ ++ S + + +++R K K + V S+ +
Sbjct: 63 RRE-RACPERAIDLENIMRRVSGSCRCCSKKIKFYRMRHHYKSCKKYQDEYGVSSVIPNV 121
Query: 145 KLQSQHRLQRTKKNIQGNEENT 166
K+ SQ ++ + ++ +NT
Sbjct: 122 KI-SQDSVRSSNRSETSASDNT 142
>UNIPROTKB|Q99PD2 [details] [associations]
symbol:Rnf138 "E3 ubiquitin-protein ligase RNF138"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 RGD:621485 Prosite:PS00518
GO:GO:0016055 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:P38398 HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:AF315468
EMBL:BC061821 IPI:IPI00200841 RefSeq:NP_446040.1 UniGene:Rn.6814
ProteinModelPortal:Q99PD2 GeneID:94196 KEGG:rno:94196
NextBio:617854 Genevestigator:Q99PD2 Uniprot:Q99PD2
Length = 209
Score = 131 (51.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 ELSADTSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGS-VT 62
Query: 93 KRSLRADPN--FDL--LISKIYPS----RDEYEAHQVRVLEKLNKSHSQAALVQSINEGI 144
+R RA P DL ++ ++ S + + +++R K K + V S+ +
Sbjct: 63 RRE-RACPERAIDLENIMRRVSGSCRCCSKKIKFYRMRHHYKSCKKYQDEYGVSSVIPNV 121
Query: 145 KLQSQHRLQRTKKNIQGNEENT 166
K+ SQ ++ + ++ +NT
Sbjct: 122 KI-SQDSVRSSNRSETSASDNT 142
>MGI|MGI:1917087 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1917087 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AC104324 eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759
KO:K11487 OrthoDB:EOG4894N6 OMA:NEHIVCY EMBL:BC028560
IPI:IPI00153112 RefSeq:NP_932109.1 UniGene:Mm.12261
ProteinModelPortal:Q8R023 SMR:Q8R023 IntAct:Q8R023 STRING:Q8R023
PhosphoSite:Q8R023 PRIDE:Q8R023 Ensembl:ENSMUST00000092614
Ensembl:ENSMUST00000165164 GeneID:69837 KEGG:mmu:69837
UCSC:uc009cmg.1 InParanoid:Q8R023 NextBio:330455 Bgee:Q8R023
CleanEx:MM_PCGF1 Genevestigator:Q8R023 Uniprot:Q8R023
Length = 259
Score = 128 (50.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 26 DPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPM 84
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P + E ++R
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 124
Score = 41 (19.5 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL + L RL L +V +N +L P + +++Q+ W
Sbjct: 192 VRCSVRAEVRHLRRVLCHRLMLNPQ---------HVQLLFDNEVL-PDHMTMKQLWLSRW 241
Query: 307 KSE-KPLEVYYSWKK 320
+ PL + YS K+
Sbjct: 242 FGKPSPLLLQYSVKE 256
>UNIPROTKB|G3V8S5 [details] [associations]
symbol:Brca1 "RCG34321, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IEA]
[GO:0007098 "centrosome cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IEA] [GO:0043009
"chordate embryonic development" evidence=IEA] [GO:0044030
"regulation of DNA methylation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0070512 "positive regulation of
histone H4-K20 methylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 RGD:2218 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:CH473948 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN Ensembl:ENSRNOT00000028109 Uniprot:G3V8S5
Length = 1817
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSARF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKK 157
L+ ++ D +E ++ + S + + + +NE + QS R KK
Sbjct: 80 SQLVEELLKIIDAFELDTGMQCANGFSFSKKKNSSSELLNEDASIIQSVGYRNRVKK 136
>UNIPROTKB|Q6J6I9 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9544 "Macaca mulatta" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589041
EMBL:AF019078 EMBL:U44730 PIR:G02999 RefSeq:NP_001108421.1
UniGene:Mmu.17471 ProteinModelPortal:Q6J6I9 SMR:Q6J6I9
STRING:Q6J6I9 GeneID:712634 KEGG:mcc:712634 InParanoid:Q6J6I9
NextBio:19972539 Uniprot:Q6J6I9
Length = 1863
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCRFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ ++ N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIIHAFQLDTGLQFANSYNFAKKENHSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>ZFIN|ZDB-GENE-030616-605 [details] [associations]
symbol:pcgf1 "polycomb group ring finger 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-030616-605 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AL831789 IPI:IPI00482456
Ensembl:ENSDART00000129432 Bgee:F1R1I1 Uniprot:F1R1I1
Length = 295
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
+ + + E+ + + L+ ++C +C T ECLH FC CI+ L++ +K CP
Sbjct: 58 DPLRNEEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPM 116
Query: 86 CRKKLVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
C K+ + +L+ D ++ K+ P E E +++
Sbjct: 117 CNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKRIK 156
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 247 VESATDGEVDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKYW 306
V + EV HL K L RL +E + F NN L P + +++++ +W
Sbjct: 227 VRCSVRAEVRHLRKVLCHRLNVEKHQV-QMLF--------NNESL-PDHMTMKRLWLSHW 276
Query: 307 KSE-KPLEVYYSWK 319
+ +PL ++Y+ K
Sbjct: 277 FGKAQPLVLHYTIK 290
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + +
Sbjct: 140 SEPEN-PSLETS 150
>UNIPROTKB|Q6J6J0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9600 "Pongo pygmaeus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 HOGENOM:HOG000230969 HOVERGEN:HBG050730
InterPro:IPR025994 Pfam:PF12820 EMBL:AY589040 EMBL:AF019077
ProteinModelPortal:Q6J6J0 SMR:Q6J6J0 STRING:Q6J6J0
InParanoid:Q6J6J0 Uniprot:Q6J6J0
Length = 1863
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ ++ N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 115 (45.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR 122
D ++ K+ P E E + R
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQR 94
>UNIPROTKB|F8W8H7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930098 ProteinModelPortal:F8W8H7 SMR:F8W8H7
PRIDE:F8W8H7 Ensembl:ENST00000354071 ArrayExpress:F8W8H7
Bgee:F8W8H7 Uniprot:F8W8H7
Length = 1598
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|E7EMP0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930496 ProteinModelPortal:E7EMP0 SMR:E7EMP0
PRIDE:E7EMP0 Ensembl:ENST00000346315 ArrayExpress:E7EMP0
Bgee:E7EMP0 Uniprot:E7EMP0
Length = 1624
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>TAIR|locus:2158705 [details] [associations]
symbol:RING1A "RING 1A" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0035102 "PRC1 complex"
evidence=IPI] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IGI] EMBL:CP002688
GO:GO:0016874 GO:GO:0035102 GO:GO:0045814 KO:K10695 IPI:IPI00938631
RefSeq:NP_001154760.1 UniGene:At.30083 ProteinModelPortal:F4K8U4
SMR:F4K8U4 PRIDE:F4K8U4 EnsemblPlants:AT5G44280.2 GeneID:834451
KEGG:ath:AT5G44280 OMA:NASEAHE Uniprot:F4K8U4
Length = 525
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 22 RTPQEAITDNTE-IAVSPRSLHSELMCPICLDMLK--KTMTTKECLHRFCSDCIITALRS 78
R+P D +E + + + ++ CPICL +K + + ++ C +
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFISYYKENKDCDGMSPQFCAT 169
Query: 79 -GNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK--LNKSHSQAA 135
N ECP CRK S+RSLR DP FD LI+ ++ + D YE ++ E QA+
Sbjct: 170 FKNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQAS 229
Query: 136 LVQ 138
+ Q
Sbjct: 230 IAQ 232
>RGD|2218 [details] [associations]
symbol:Brca1 "breast cancer 1, early onset" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001726 "ruffle" evidence=ISO] [GO:0003684 "damaged
DNA binding" evidence=ISO;TAS] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005694
"chromosome" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006301 "postreplication
repair" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006349 "regulation of gene expression by genetic imprinting"
evidence=ISO] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007098 "centrosome cycle"
evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007584 "response to nutrient" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=ISO]
[GO:0010033 "response to organic substance" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO;ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0033993 "response
to lipid" evidence=IEP] [GO:0034446 "substrate adhesion-dependent
cell spreading" evidence=ISO] [GO:0035066 "positive regulation of
histone acetylation" evidence=ISO] [GO:0035067 "negative regulation
of histone acetylation" evidence=ISO] [GO:0043009 "chordate embryonic
development" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=ISO] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO;ISS]
[GO:0070512 "positive regulation of histone H4-K20 methylation"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=ISO] [GO:0071681
"cellular response to indole-3-methanol" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO;ISS] [GO:2000145
"regulation of cell motility" evidence=ISO] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=ISO] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=ISO]
[GO:0005925 "focal adhesion" evidence=ISO] [GO:0031941 "filamentous
actin" evidence=ISO] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 RGD:2218
Prosite:PS00518 GO:GO:0005694 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 GO:GO:0006633 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820
GO:GO:0043009 GO:GO:0009048 EMBL:AF036760 EMBL:S82504 EMBL:S82502
EMBL:U60523 EMBL:S82500 IPI:IPI00202716 RefSeq:NP_036646.1
UniGene:Rn.217584 UniGene:Rn.48840 PDB:1L0B PDBsum:1L0B
ProteinModelPortal:O54952 SMR:O54952 STRING:O54952 PhosphoSite:O54952
PRIDE:O54952 GeneID:497672 KEGG:rno:497672 UCSC:RGD:2218
InParanoid:O54952 EvolutionaryTrace:O54952 NextBio:697729
Genevestigator:O54952 GermOnline:ENSRNOG00000020701 GO:GO:0007098
Uniprot:O54952
Length = 1817
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/132 (27%), Positives = 69/132 (52%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++T +C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVST-QCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSARF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ D +E ++ + S + + + +NE + QS R KK +Q
Sbjct: 80 SQLVEELLKIIDAFELDTGMQCANGFSFSKKKNSSSELLNEDASIIQSVGYRNRVKK-LQ 138
Query: 161 GNEENTPDISNT 172
E + + ++
Sbjct: 139 QIESGSATLKDS 150
>UNIPROTKB|P38398 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0046600 "negative regulation of centriole
replication" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015631 "tubulin binding" evidence=NAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=NAS;TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0006359 "regulation of transcription from RNA polymerase III
promoter" evidence=TAS] [GO:0042127 "regulation of cell
proliferation" evidence=TAS] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0050681 "androgen receptor binding"
evidence=NAS] [GO:0000151 "ubiquitin ligase complex" evidence=NAS]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IDA] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0010212 "response to
ionizing radiation" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=IMP;TAS] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=IMP] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0071681
"cellular response to indole-3-methanol" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006974 "response to DNA damage stimulus" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IDA;TAS] [GO:0006301 "postreplication
repair" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0031941 "filamentous actin"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0001726 "ruffle" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] [GO:2000145 "regulation of cell motility"
evidence=IDA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0035066 "positive regulation of
histone acetylation" evidence=IDA] [GO:0051571 "positive regulation
of histone H3-K4 methylation" evidence=IDA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IDA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IDA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IDA] [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IDA] Reactome:REACT_216 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533 Prosite:PS00518
GO:GO:0005886 GO:GO:0045892 GO:GO:0005694 Reactome:REACT_115566
GO:GO:0008630 GO:GO:0007059 GO:GO:0005654 GO:GO:0030521
GO:GO:0071158 Pathway_Interaction_DB:aurora_a_pathway Orphanet:1331
GO:GO:0046872 GO:GO:0008270 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0006633 GO:GO:0003723 GO:GO:0010212
GO:GO:0042127 GO:GO:0044212 GO:GO:0007049 GO:GO:2000145
GO:GO:0003713 PDB:3COJ PDBsum:3COJ GO:GO:0045717
Reactome:REACT_111183 GO:GO:0030529 GO:GO:0001726 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 GO:GO:0031398
GO:GO:0004842 GO:GO:0034446 MIM:114480
Pathway_Interaction_DB:ar_pathway GO:GO:0015631 GO:GO:0050681
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865
Pathway_Interaction_DB:bard1pathway GO:GO:0031572 GO:GO:0070531
GO:GO:0031436 PDB:1JM7 PDBsum:1JM7 Orphanet:145 GO:GO:0085020
GO:GO:0006301 eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C
InterPro:IPR025994 Pfam:PF12820 EMBL:U14680 EMBL:L78833 EMBL:U64805
EMBL:AF005068 EMBL:DQ190450 EMBL:DQ190451 EMBL:DQ190452
EMBL:DQ190453 EMBL:DQ190454 EMBL:DQ190455 EMBL:DQ190456
EMBL:AY273801 EMBL:AC060780 EMBL:AC135721 EMBL:BC072418
IPI:IPI00027272 IPI:IPI00027277 IPI:IPI00185298 IPI:IPI00218982
IPI:IPI00909467 IPI:IPI00945705 PIR:A58881 RefSeq:NP_009225.1
RefSeq:NP_009228.2 RefSeq:NP_009229.2 RefSeq:NP_009230.2
RefSeq:NP_009231.2 UniGene:Hs.194143 PDB:1JNX PDB:1N5O PDB:1OQA
PDB:1T15 PDB:1T29 PDB:1T2U PDB:1T2V PDB:1Y98 PDB:2ING PDB:3K0H
PDB:3K0K PDB:3K15 PDB:3K16 PDB:3PXA PDB:3PXB PDB:3PXC PDB:3PXD
PDB:3PXE PDBsum:1JNX PDBsum:1N5O PDBsum:1OQA PDBsum:1T15
PDBsum:1T29 PDBsum:1T2U PDBsum:1T2V PDBsum:1Y98 PDBsum:2ING
PDBsum:3K0H PDBsum:3K0K PDBsum:3K15 PDBsum:3K16 PDBsum:3PXA
PDBsum:3PXB PDBsum:3PXC PDBsum:3PXD PDBsum:3PXE DisProt:DP00238
ProteinModelPortal:P38398 SMR:P38398 DIP:DIP-5971N IntAct:P38398
MINT:MINT-90433 STRING:P38398 PhosphoSite:P38398 DMDM:728984
PaxDb:P38398 PRIDE:P38398 DNASU:672 Ensembl:ENST00000352993
Ensembl:ENST00000357654 Ensembl:ENST00000468300 GeneID:672
KEGG:hsa:672 UCSC:uc002icp.4 UCSC:uc002icq.3 UCSC:uc010whl.2
GeneCards:GC17M041197 HGNC:HGNC:1100 HPA:CAB001946 HPA:CAB018369
HPA:HPA034966 MIM:113705 MIM:167000 MIM:604370 MIM:614320
neXtProt:NX_P38398 Orphanet:1333 Orphanet:168829 PharmGKB:PA25411
InParanoid:P38398 BindingDB:P38398 ChEMBL:CHEMBL5990 ChiTaRS:BRCA1
EvolutionaryTrace:P38398 GenomeRNAi:672 NextBio:2752
PMAP-CutDB:P38398 ArrayExpress:P38398 Bgee:P38398 CleanEx:HS_BRCA1
Genevestigator:P38398 GermOnline:ENSG00000012048 GO:GO:0008274
GO:GO:0071681 GO:GO:0006978 GO:GO:0046600 GO:GO:0051573
GO:GO:0051571 GO:GO:2000617 GO:GO:2000620 GO:GO:0070512
GO:GO:0006359 Uniprot:P38398
Length = 1863
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|Q9GKK8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9598 "Pan troglodytes" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005694 "chromosome" evidence=ISS] [GO:0006359 "regulation of
transcription from RNA polymerase III promoter" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0015631
"tubulin binding" evidence=NAS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=TAS] [GO:0042981 "regulation of apoptotic process"
evidence=TAS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0046600 "negative regulation of centriole replication"
evidence=NAS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0006915
GO:GO:0005694 GO:GO:0045893 GO:GO:0042981 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0006633
GO:GO:0042127 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0015631
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865 GO:GO:0031436 GO:GO:0085020
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0008274 GO:GO:0006978 GO:GO:0046600
GO:GO:0006359 EMBL:AF207822 EMBL:AY365046 EMBL:AF019075
RefSeq:NP_001038958.1 UniGene:Ptr.6298 ProteinModelPortal:Q9GKK8
SMR:Q9GKK8 STRING:Q9GKK8 GeneID:449497 KEGG:ptr:449497
InParanoid:Q9GKK8 NextBio:20832624 Uniprot:Q9GKK8
Length = 1863
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|E9PFC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0007420
GO:GO:0032355 GO:GO:0005759 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0007584
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 IPI:IPI00945705 RefSeq:NP_009231.2 GeneID:672
HGNC:HGNC:1100 ChiTaRS:BRCA1 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 ProteinModelPortal:E9PFC7 SMR:E9PFC7
Ensembl:ENST00000471181 UCSC:uc002ict.3 ArrayExpress:E9PFC7
Bgee:E9PFC7 Uniprot:E9PFC7
Length = 1884
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
AV+P + CPICL + ++TK C H FC CI AL S +CPTCRKK+ K
Sbjct: 115 AVAPPVEEPKFSCPICLCPFTQEVSTK-CGHIFCKKCIKNAL-SLQAKCPTCRKKITVKD 172
Query: 95 SLR 97
+R
Sbjct: 173 LIR 175
>MGI|MGI:1201691 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=ISO] [GO:0032184 "SUMO polymer binding" evidence=ISO]
[GO:0033142 "progesterone receptor binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO] [GO:0070979
"protein K11-linked ubiquitination" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO] [GO:0090169
"regulation of spindle assembly" evidence=ISO] [GO:0090234
"regulation of kinetochore assembly" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1201691 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0046685 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070979 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184 CTD:6047
eggNOG:NOG327779 HOVERGEN:HBG018577 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 GO:GO:0090234 GO:GO:0090169 EMBL:AF169300
EMBL:AK019171 EMBL:AK090162 EMBL:AK147057 EMBL:AK151116
EMBL:AK158987 EMBL:AK159778 EMBL:AK159949 EMBL:BC003282 EMBL:U95141
IPI:IPI00137942 RefSeq:NP_035408.1 UniGene:Mm.21281
ProteinModelPortal:Q9QZS2 SMR:Q9QZS2 STRING:Q9QZS2
PhosphoSite:Q9QZS2 PRIDE:Q9QZS2 Ensembl:ENSMUST00000030992
GeneID:19822 KEGG:mmu:19822 GeneTree:ENSGT00390000010318
InParanoid:Q9QZS2 NextBio:297289 PMAP-CutDB:Q9QZS2 Bgee:Q9QZS2
CleanEx:MM_RNF4 Genevestigator:Q9QZS2 GermOnline:ENSMUSG00000029110
Uniprot:Q9QZS2
Length = 194
Score = 126 (49.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ D A PR + CPIC+D + + + EC H
Sbjct: 105 SRDKDVYVTTHTPRSTKDDG---ATGPRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 160
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 161 VFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>UNIPROTKB|Q6J6I8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9595 "Gorilla gorilla gorilla" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 PANTHER:PTHR13763
HOVERGEN:HBG050730 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589042
EMBL:AF019076 ProteinModelPortal:Q6J6I8 SMR:Q6J6I8 Uniprot:Q6J6I8
Length = 1863
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 79
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSHSQAALVQSINEGIKL-QSQHRLQRTKKNIQ 160
L+ ++ ++ + N + + + + + + + QS R K+ +Q
Sbjct: 80 SQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSTGYRSRAKRLLQ 139
Query: 161 GNEENTPDISNT 172
EN P + T
Sbjct: 140 SEPEN-PSLQET 150
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS CI + ECP CR+++ SK RSL D
Sbjct: 5 LENELQCTICSEHFIEAVTLN-CAHSFCSYCIDEWTKR-KVECPICRQEIKSKTRSLVLD 62
Query: 100 PNFDLLISKIYPSRDEYEAHQVR 122
D ++ + E+ +R
Sbjct: 63 NCIDRMVENLDVEMKEHRLTLIR 85
>UNIPROTKB|F1N8I5 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
GO:GO:0009048 GO:GO:0007098 EMBL:AADN02068671 IPI:IPI00587753
Ensembl:ENSGALT00000004392 Ensembl:ENSGALT00000039722 OMA:INASHEN
Uniprot:F1N8I5
Length = 1749
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/136 (30%), Positives = 71/136 (52%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSL 96
++ L CP+CLD++K+ ++TK C H FC C+ L + G +CP C+ + V+KRSL
Sbjct: 17 AMQKNLECPVCLDVIKEPVSTK-CDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKRSL 74
Query: 97 RADPNFDLLISKIYPSRDEYEAHQ-VRVLEK--LNKSHSQAALVQSI-NEGIKLQSQHRL 152
+ + F LI + + +E V+ L K+ ++ A + + N +QS+
Sbjct: 75 KENSRFKQLIEGLLEAISAFELDTGVKFLSSRYFPKTSTEVATAELLGNNSSVIQSKGF- 133
Query: 153 QRTKKNIQGNEENTPD 168
R +K +G +EN D
Sbjct: 134 -RNRK--RGAKENRQD 146
>UNIPROTKB|Q32LN5 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 EMBL:BC109497 IPI:IPI00709714
RefSeq:NP_001033263.1 UniGene:Bt.45000 ProteinModelPortal:Q32LN5
PRIDE:Q32LN5 Ensembl:ENSBTAT00000026851 GeneID:538445
KEGG:bta:538445 CTD:51444 eggNOG:NOG44750 InParanoid:Q32LN5
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K NextBio:20877365
Uniprot:Q32LN5
Length = 245
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGN-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>UNIPROTKB|F1SAL6 [details] [associations]
symbol:RNF138 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 KO:K10668 OMA:EANFTRQ EMBL:CU467523
EMBL:CU019565 RefSeq:XP_003127930.1 UniGene:Ssc.63848
Ensembl:ENSSSCT00000004130 GeneID:100515956 KEGG:ssc:100515956
Uniprot:F1SAL6
Length = 245
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGN-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>MGI|MGI:1929211 [details] [associations]
symbol:Rnf138 "ring finger protein 138" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 MGI:MGI:1929211
Prosite:PS00518 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:P38398 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AB025010 EMBL:AB025011
EMBL:AK010486 EMBL:AK004238 EMBL:AK136138 EMBL:BC003712
IPI:IPI00123749 IPI:IPI00132441 RefSeq:NP_062680.2
RefSeq:NP_997506.1 UniGene:Mm.253542 ProteinModelPortal:Q9CQE0
SMR:Q9CQE0 IntAct:Q9CQE0 STRING:Q9CQE0 PhosphoSite:Q9CQE0
PRIDE:Q9CQE0 Ensembl:ENSMUST00000052396 Ensembl:ENSMUST00000072847
GeneID:56515 KEGG:mmu:56515 UCSC:uc008efb.1 UCSC:uc008efc.1
InParanoid:Q9CQE0 NextBio:312826 Bgee:Q9CQE0 CleanEx:MM_RNF138
Genevestigator:Q9CQE0 GermOnline:ENSMUSG00000024317 Uniprot:Q9CQE0
Length = 245
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 ELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGS-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 111 (44.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNF 102
++ +CPIC DM+++ TK C H FC CI +L N+ CP C + + L PNF
Sbjct: 37 NDFVCPICFDMIEEAYMTK-CGHSFCYKCIHQSLEDNNR-CPKCNYVVDNIDHLY--PNF 92
Query: 103 DLLISKIYPSRDEY 116
L I+ P+ D Y
Sbjct: 93 -LGIT-CSPTTDSY 104
>UNIPROTKB|Q5T8Z4 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403 UniGene:Hs.731287
HGNC:HGNC:1066 IPI:IPI00646013 SMR:Q5T8Z4 Ensembl:ENST00000442508
Uniprot:Q5T8Z4
Length = 150
Score = 111 (44.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 111 (44.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 127 (49.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
R + + C IC L K ECLH FC CI+ N ECP C ++ L
Sbjct: 10 RDFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESN-ECPECGIQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQ 120
R D + +I K+ P E E HQ
Sbjct: 69 LRLDKTLEEIIFKLVPGLREKEEHQ 93
>TAIR|locus:2033103 [details] [associations]
symbol:DRIP1 "DREB2A-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 EMBL:AC011001 EMBL:BX815334
EMBL:BT033132 IPI:IPI00534763 IPI:IPI00536628 PIR:E86202
RefSeq:NP_172162.3 RefSeq:NP_973775.1 UniGene:At.28756
ProteinModelPortal:Q9M9Y4 SMR:Q9M9Y4 IntAct:Q9M9Y4 PaxDb:Q9M9Y4
PRIDE:Q9M9Y4 EnsemblPlants:AT1G06770.1 GeneID:837188
KEGG:ath:AT1G06770 TAIR:At1g06770 eggNOG:NOG277991
HOGENOM:HOG000240404 InParanoid:Q3EDH5 KO:K16277 OMA:LNKFTQN
PhylomeDB:Q9M9Y4 ProtClustDB:CLSN2688579 Genevestigator:Q9M9Y4
Uniprot:Q9M9Y4
Length = 421
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/127 (32%), Positives = 58/127 (45%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVS 92
I V ++ + L C IC ++L+ T ECLH FC CI + E CP C L S
Sbjct: 3 IKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGS 62
Query: 93 K--RSLRADPNFDLLISKIYP-SRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQ 149
LR D N L +KI+ R + +A + L K S ++LV S + Q+
Sbjct: 63 TPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVSLPGKRKERSISSLVVS-TPMVSAQAG 121
Query: 150 HRLQRTK 156
+RTK
Sbjct: 122 TTRRRTK 128
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 126 (49.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K+
Sbjct: 35 EVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIHE 93
Query: 93 KR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ +L+ D ++ K+ P + E ++R
Sbjct: 94 TQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIR 126
Score = 37 (18.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 247 VESATDGEVDHLTKYLTMRLRL 268
V + EV HL K L RL L
Sbjct: 194 VRCSVRAEVRHLRKVLCHRLML 215
>UNIPROTKB|Q8WVD3 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 EMBL:CH471088
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 CleanEx:HS_NARF
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AF162680 EMBL:AK023579
EMBL:AK315761 EMBL:BT006878 EMBL:CR457150 EMBL:BC018107
EMBL:AL133557 IPI:IPI00012239 IPI:IPI00328938 PIR:T43439
RefSeq:NP_001178253.2 RefSeq:NP_057355.2 RefSeq:NP_937761.1
UniGene:Hs.302408 ProteinModelPortal:Q8WVD3 SMR:Q8WVD3
IntAct:Q8WVD3 MINT:MINT-1479614 STRING:Q8WVD3 PhosphoSite:Q8WVD3
DMDM:74762632 PRIDE:Q8WVD3 DNASU:51444 Ensembl:ENST00000257190
Ensembl:ENST00000261593 GeneID:51444 KEGG:hsa:51444 UCSC:uc002kxg.3
UCSC:uc002kxh.3 GeneCards:GC18P029671 HGNC:HGNC:17765 HPA:HPA041101
HPA:HPA041373 neXtProt:NX_Q8WVD3 PharmGKB:PA134952071
InParanoid:Q8WVD3 PhylomeDB:Q8WVD3 GenomeRNAi:51444 NextBio:55035
Bgee:Q8WVD3 CleanEx:HS_RNF138 Genevestigator:Q8WVD3 Uniprot:Q8WVD3
Length = 245
Score = 127 (49.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
+++ + + CP+C ++LK + T C H FC C +TA+R CP CR V+
Sbjct: 4 DLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGN-VT 62
Query: 93 KRSLRADPNFDLLISKI 109
+R RA P L + I
Sbjct: 63 RRE-RACPERALDLENI 78
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 110 (43.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYP 111
R L R+D ++ K+ P
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVP 84
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 126 (49.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/110 (29%), Positives = 47/110 (42%)
Query: 27 AITDNTEIAVSPRS-LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPT 85
A+ + E + P S + + C IC L T ECLH FC CI+ N+ CP
Sbjct: 102 AVESDQEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CPK 160
Query: 86 CR---KKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
C + +LR DP ++ K+ +E E Q R K N+ +
Sbjct: 161 CNIIVHEAKPHNNLRMDPQLQNIVYKLVSGLEEKEKKQRREFYKENRGQT 210
>UNIPROTKB|D6RA71 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0032184 "SUMO
polymer binding" evidence=IEA] [GO:0033142 "progesterone receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046685 "response
to arsenic-containing substance" evidence=IEA] [GO:0050681
"androgen receptor binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0015630
GO:GO:0046685 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0008270 GO:GO:0045944 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070979 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0031491 GO:GO:0051865 GO:GO:0085020
EMBL:AL110117 EMBL:AL645924 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 HGNC:HGNC:10067 HOGENOM:HOG000059548 ChiTaRS:RNF4
IPI:IPI00967026 ProteinModelPortal:D6RA71 SMR:D6RA71
Ensembl:ENST00000502316 ArrayExpress:D6RA71 Bgee:D6RA71
Uniprot:D6RA71
Length = 188
Score = 122 (48.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>UNIPROTKB|F5H1U2 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0015630 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL110117 EMBL:AL645924 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 HGNC:HGNC:10067 ChiTaRS:RNF4 IPI:IPI01012670
ProteinModelPortal:F5H1U2 SMR:F5H1U2 Ensembl:ENST00000541204
PhylomeDB:F5H1U2 ArrayExpress:F5H1U2 Bgee:F5H1U2 Uniprot:F5H1U2
Length = 190
Score = 122 (48.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>UNIPROTKB|P78317 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0033142
"progesterone receptor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0050681
"androgen receptor binding" evidence=NAS] [GO:0030521 "androgen
receptor signaling pathway" evidence=NAS] [GO:0090234 "regulation
of kinetochore assembly" evidence=IMP] [GO:0090169 "regulation of
spindle assembly" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0031491
"nucleosome binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032184 "SUMO polymer binding" evidence=ISS] [GO:0016605 "PML
body" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0030521 GO:GO:0043161 GO:GO:0015630 GO:GO:0046685
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070979
GO:GO:0050681 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184
EMBL:AL110117 EMBL:AL645924 EMBL:AB000468 EMBL:U95140 EMBL:AK128038
EMBL:AK309509 EMBL:AK312534 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 EMBL:BC031935 IPI:IPI00297694 IPI:IPI00965645
RefSeq:NP_001171938.1 RefSeq:NP_001171939.1 RefSeq:NP_002929.1
UniGene:Hs.740360 PDB:2EA6 PDB:2XEU PDBsum:2EA6 PDBsum:2XEU
ProteinModelPortal:P78317 SMR:P78317 IntAct:P78317 MINT:MINT-271054
STRING:P78317 PhosphoSite:P78317 DMDM:18202358 PRIDE:P78317
DNASU:6047 Ensembl:ENST00000314289 Ensembl:ENST00000506706
Ensembl:ENST00000511600 Ensembl:ENST00000511859 GeneID:6047
KEGG:hsa:6047 UCSC:uc003gfb.3 CTD:6047 GeneCards:GC04P002463
HGNC:HGNC:10067 HPA:HPA049356 MIM:602850 neXtProt:NX_P78317
PharmGKB:PA34439 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 InParanoid:P78317 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 EvolutionaryTrace:P78317 GenomeRNAi:6047 NextBio:23561
ArrayExpress:P78317 Bgee:P78317 CleanEx:HS_RNF4
Genevestigator:P78317 GermOnline:ENSG00000063978 GO:GO:0090234
GO:GO:0090169 Uniprot:P78317
Length = 190
Score = 122 (48.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ A D + P S CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNA-RDEGATGLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>UNIPROTKB|F1S8Q2 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:CU640885
Ensembl:ENSSSCT00000009507 ArrayExpress:F1S8Q2 Uniprot:F1S8Q2
Length = 190
Score = 122 (48.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y +TP+ A E A R + CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTQTPRNA---REEAATGLRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDSLKNANT-CPTCRKKINHKR 184
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 109 (43.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 36/116 (31%), Positives = 55/116 (47%)
Query: 19 ELNRTPQEA--ITDNTEIAVSPRS--LHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
EL +T +E + E +S + L +EL C IC + + +T C H FCS CI
Sbjct: 21 ELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN-CAHSFCSYCINE 79
Query: 75 ALRSGNKECPTCRKKLVSK-RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
++ ECP CRK + SK SL D + ++ + S + E V + E+ K
Sbjct: 80 WMKR-KVECPICRKDIKSKTHSLVLDNCINKMVDNL--SSEVKERRVVLIKERKAK 132
>TAIR|locus:505006682 [details] [associations]
symbol:AT5G48655 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG327779
EMBL:AY150482 EMBL:AK118224 IPI:IPI00544715 RefSeq:NP_568701.1
RefSeq:NP_851156.1 RefSeq:NP_974908.1 UniGene:At.22299
ProteinModelPortal:Q8GS41 SMR:Q8GS41 PaxDb:Q8GS41 PRIDE:Q8GS41
EnsemblPlants:AT5G48655.1 EnsemblPlants:AT5G48655.2
EnsemblPlants:AT5G48655.3 GeneID:834923 KEGG:ath:AT5G48655
TAIR:At5g48655 HOGENOM:HOG000070995 InParanoid:Q8GS41 OMA:PANISNK
PhylomeDB:Q8GS41 ProtClustDB:CLSN2689957 ArrayExpress:Q8GS41
Genevestigator:Q8GS41 Uniprot:Q8GS41
Length = 203
Score = 123 (48.4 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
A +P + CPIC+ + M+TK C H FC CI A+ K CPTCRKK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 95 SLR 97
+R
Sbjct: 194 LIR 196
>UNIPROTKB|I3L7C9 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IEA] [GO:2000617 "positive regulation of
histone H3-K9 acetylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0044030 "regulation of DNA methylation"
evidence=IEA] [GO:0043009 "chordate embryonic development"
evidence=IEA] [GO:0035067 "negative regulation of histone
acetylation" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0007098 "centrosome
cycle" evidence=IEA] [GO:0006349 "regulation of gene expression by
genetic imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:FP340289
Ensembl:ENSSSCT00000025436 Uniprot:I3L7C9
Length = 1865
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ ++KRSL+ F
Sbjct: 20 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQESTRF 77
Query: 103 DLLISKIYPSRDEYEAHQ-VRVLEKLNKSH-SQAALVQSINEGIKL-QSQHRLQRTKKNI 159
L+ ++ +E ++ N S ++ + + E + + QS R K+
Sbjct: 78 SQLVEELLKIIHAFELDTGLQFANNYNFSKKTENNSPEHLKEEVSIIQSMGYRNRAKRLR 137
Query: 160 QGNEENTPDISNT 172
Q + E+ P + T
Sbjct: 138 QSDPED-PTLQET 149
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 108 (43.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 4 TEQSGTTKSWELSMYELNRTPQEAITDNT--EIAVSPRSLHSELMCPICLDMLKKTMTTK 61
T S + E+ + E + Q+ I + T E + L S++ CPIC D +++ +TT
Sbjct: 7 TNISSDDEDDEIEVLEFRKLTQDLIDNPTQPEERRITKKL-SDVECPICFDEVRRAITTS 65
Query: 62 ECLHRFCSDCIITALRS------------GNKECPTCRKKLVSKRSL 96
C H FC +CI ++ S G CP CRK++V K ++
Sbjct: 66 -CGHVFCLECIERSISSSHARGQVRSSQRGRGLCPLCRKQVVFKETI 111
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 108 (43.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR--SGNKE-CPTCRKKLVSKRS 95
RSL E+ C ICLD L+ +T +C H FC C T +R SG++ CP C+K K +
Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI-DCGHVFCRSCT-TDVRPISGSRPVCPLCKKPF-KKEN 64
Query: 96 LR 97
+R
Sbjct: 65 IR 66
>UNIPROTKB|Q1L721 [details] [associations]
symbol:rnf138 "E3 ubiquitin-protein ligase RNF138"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042787 GO:GO:0051865
HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:DQ011285
RefSeq:NP_001089974.1 UniGene:Xl.52927 ProteinModelPortal:Q1L721
GeneID:735045 KEGG:xla:735045 Xenbase:XB-GENE-1001378
Uniprot:Q1L721
Length = 222
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL-VSKRS 95
E +CP+C ++L+ + T+ C H FC C + A++SG CP CR + S+RS
Sbjct: 14 EFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCRGPVNKSERS 66
>UNIPROTKB|F1PC91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000036593
Uniprot:F1PC91
Length = 189
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ E A R + CPIC+D + + + EC H
Sbjct: 101 SRDRDVYVTTHTPRNT---REEAATGLRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 156
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ AL++ N CPTCRKK+ KR
Sbjct: 157 VFCSQCLRDALKNANT-CPTCRKKINHKR 184
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
+++ + C +C L T ECLH FC C++ L N CPTCR
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCR 56
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK--ECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+ T +C H FC CI + + + +CP C K + KR
Sbjct: 10 LQEEMICPICLDILQDPATI-DCGHNFCLSCITQSGEAADSVLKCPLCNK--IVKRDT-I 65
Query: 99 DPNFDL--LISKIY---PSRDEYEAHQVRVLEKLNKSH 131
PN+ L L+ KI PS + E ++R L K H
Sbjct: 66 TPNWLLVNLVEKIQAMDPSDMQPETEELRCLRHGEKCH 103
>UNIPROTKB|J9NS55 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000044321
Uniprot:J9NS55
Length = 191
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ E A R + CPIC+D + + + EC H
Sbjct: 102 SRDRDVYVTTHTPRNT---REEAATGLRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 157
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ AL++ N CPTCRKK+ KR
Sbjct: 158 VFCSQCLRDALKNANT-CPTCRKKINHKR 185
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 47 CPICLDMLKKT--MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
CPIC+D + K ++TK C H FC +CI TA+R+ +K CP C KKL +++ R
Sbjct: 266 CPICMDSVSKREPVSTK-CGHVFCRECIETAIRATHK-CPICNKKLTARQFFR 316
>UNIPROTKB|F1PF91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:THRQYHP
GeneTree:ENSGT00390000010318 EMBL:AAEX03002450 EMBL:AAEX03002451
Ensembl:ENSCAFT00000023584 Uniprot:F1PF91
Length = 195
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ E A R + CPIC+D + + + EC H
Sbjct: 106 SRDRDVYVTTHTPRNT---REEAATGLRP-SGTVSCPICMDGYSEIVQNGRLIVSTECGH 161
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ AL++ N CPTCRKK+ KR
Sbjct: 162 VFCSQCLRDALKNANT-CPTCRKKINHKR 189
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 31 NTEIA-VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
N E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLCNIK 86
Query: 90 LVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ + +L+ D ++ K+ P E E ++R
Sbjct: 87 IHETQPLLNLKLDRVMQDIVYKLVPGLQENEDSRIR 122
>UNIPROTKB|Q6NRG0 [details] [associations]
symbol:rnf8-b "E3 ubiquitin-protein ligase RNF8-B"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 EMBL:BC070792 RefSeq:NP_001084862.1
UniGene:Xl.4442 ProteinModelPortal:Q6NRG0 SMR:Q6NRG0 GeneID:431911
KEGG:xla:431911 CTD:431911 Xenbase:XB-GENE-5914276 Uniprot:Q6NRG0
Length = 532
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS CI + R +ECP CR++++S+ RSL D
Sbjct: 371 LDNELQCIICSEHFIEAVTLN-CAHSFCSYCI-KSWRKRKEECPICRQEILSETRSLVLD 428
Query: 100 PNFDLLISKIYPSRDEYEAHQV-RVLEKLNKSHSQAALVQS 139
D ++ K+ P A + E + S LV S
Sbjct: 429 NCIDSMVDKLSPEMKNRRAALILERKEMVQAEESNPVLVVS 469
>UNIPROTKB|F1NCS0 [details] [associations]
symbol:F1NCS0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 EMBL:AADN02012507
EMBL:AADN02012506 IPI:IPI00822105 Ensembl:ENSGALT00000038028
OMA:GEMALRS Uniprot:F1NCS0
Length = 138
Score = 106 (42.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS----GNKECPTCRKK 89
+ + S HS+ CPICL + + T C H FC C+IT + G CP CR+K
Sbjct: 6 LQIQQPSNHSDFSCPICLQTVTLPVETN-CGHLFCGSCLITYWKHSPWLGAIICPLCRQK 64
Query: 90 LV 91
+V
Sbjct: 65 VV 66
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/137 (26%), Positives = 54/137 (39%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVRVL-EKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D ++ K+ P E E + R KL ++ + L S HR TK
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGLEVPGDVKGETCSAKQHLDS-HRNGETK 128
Query: 157 KNIQGNEENTPDISNTD 173
N+E + D
Sbjct: 129 AEDSSNKEAAEEKQEED 145
>ZFIN|ZDB-GENE-041008-246 [details] [associations]
symbol:im:7142942 "im:7142942" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-041008-246 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000010318 EMBL:BX004830
IPI:IPI00613625 RefSeq:XP_001331980.1 RefSeq:XP_683428.1
UniGene:Dr.107727 Ensembl:ENSDART00000123145 GeneID:557319
KEGG:dre:557319 NextBio:20881936 Uniprot:E7EXS0
Length = 184
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 39 RSLHSELMCPICLDMLK------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
RS + CP+C+D+ + M + +C H FCS CI +L + CPTCRKKL
Sbjct: 118 RSTPGAISCPVCMDVYSEIMDSGRLMVSTKCGHLFCSQCIRDSLSRAHS-CPTCRKKLTH 176
Query: 93 KR 94
K+
Sbjct: 177 KQ 178
>RGD|3583 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0016605 "PML body"
evidence=ISO;IDA] [GO:0017025 "TBP-class protein binding"
evidence=TAS] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IDA] [GO:0032184 "SUMO
polymer binding" evidence=IPI] [GO:0033142 "progesterone receptor
binding" evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS;IDA] [GO:0046685 "response to
arsenic-containing substance" evidence=ISO;IDA] [GO:0050681 "androgen
receptor binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IMP] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IDA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IDA] [GO:0090169 "regulation of spindle
assembly" evidence=ISO;ISS] [GO:0090234 "regulation of kinetochore
assembly" evidence=ISO;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:3583
Prosite:PS00518 GO:GO:0005737 GO:GO:0005654 GO:GO:0043161
GO:GO:0046685 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070979 GO:GO:0030331 InterPro:IPR017907
GO:GO:0070936 GO:GO:0070534 GO:GO:0031491 GO:GO:0051865 GO:GO:0085020
GO:GO:0017025 CTD:6047 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 OrthoDB:EOG4S4PHN GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AF022081 EMBL:AY050655
EMBL:BC062024 IPI:IPI00213362 RefSeq:NP_062055.1 UniGene:Rn.30015
PDB:3NG2 PDB:4AP4 PDBsum:3NG2 PDBsum:4AP4 ProteinModelPortal:O88846
SMR:O88846 STRING:O88846 PhosphoSite:O88846 PRIDE:O88846
Ensembl:ENSRNOT00000019555 GeneID:29274 KEGG:rno:29274
InParanoid:O88846 EvolutionaryTrace:O88846 NextBio:608631
Genevestigator:O88846 GermOnline:ENSRNOG00000013930 Uniprot:O88846
Length = 194
Score = 119 (46.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 12 SWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLH 65
S + +Y TP+ + T + P S CPIC+D + + + EC H
Sbjct: 105 SKDKDVYVTTHTPRSTKDEGTT-GLRPSGTVS---CPICMDGYSEIVQNGRLIVSTECGH 160
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 161 VFCSQCLRDSLKNANT-CPTCRKKINHKR 188
>UNIPROTKB|Q28H21 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
CTD:84759 KO:K11487 EMBL:CR761098 RefSeq:NP_001016417.2
UniGene:Str.20413 ProteinModelPortal:Q28H21 SMR:Q28H21
GeneID:549171 KEGG:xtr:549171 Xenbase:XB-GENE-6454077
Uniprot:Q28H21
Length = 259
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 31 NTEIA-VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKK 89
N E+ V + L+ ++C +C T ECLH FC CI+ L++ +K CP C K
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLCNIK 86
Query: 90 LVSKR---SLRADPNFDLLISKIYPSRDEYEAHQVR 122
+ + +L+ D ++ K+ P E E ++R
Sbjct: 87 IHETQPLLNLKLDRVMQDIVYKLVPGLQENEDGRIR 122
>ZFIN|ZDB-GENE-040426-849 [details] [associations]
symbol:rnf8 "ring finger protein 8, E3 ubiquitin
protein ligase" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0043486 "histone exchange" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=ISS] [GO:0033522
"histone H2A ubiquitination" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 ZFIN:ZDB-GENE-040426-849
GO:GO:0005634 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 EMBL:CU660013
Ensembl:ENSDART00000151429 Bgee:I3IRX0 Uniprot:I3IRX0
Length = 531
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 42/150 (28%), Positives = 64/150 (42%)
Query: 25 QEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECP 84
+E +T TE+ L SEL C IC ++ + +T C H FC CI + R+ +CP
Sbjct: 376 EEVVTQMTEV------LESELQCSICSELFIEAVTLN-CAHSFCQHCI-SEWRNRKDKCP 427
Query: 85 TCRKKLVSK-RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEG 143
C + + S+ RSL D D ++ + S D E V + E+ + V IN+
Sbjct: 428 MCWQNITSQTRSLVLDNCIDRMVENL--SADMRERRLVLINERKGLKVRASPAVVVINDD 485
Query: 144 IKLQSQHRLQRTKKNIQGNEENTPDISNTD 173
+ Q N PD S +D
Sbjct: 486 SDSEDSSSSDGDTF-FQSNSSIFPDSSGSD 514
>UNIPROTKB|F1NLA3 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AADN02065914
IPI:IPI00588017 Ensembl:ENSGALT00000024747 Uniprot:F1NLA3
Length = 245
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/137 (26%), Positives = 56/137 (40%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 14 INAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 72
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVRVL-EKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D ++ K+ P E E + R KL ++ + L S HR TK
Sbjct: 73 HDRTMQDIVYKLVPGLQEAEMKKQREFYHKLGMEVPGDIKGETCSAKQHLDS-HRNGETK 131
Query: 157 KNIQGNEENTPDISNTD 173
+ N+E + + D
Sbjct: 132 TDENSNKETSEEKQEED 148
>UNIPROTKB|J3KT13 [details] [associations]
symbol:PCGF2 "Polycomb group ring finger 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
EMBL:CH471152 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 InterPro:IPR017907 UniGene:Hs.713595
UniGene:Hs.371617 HGNC:HGNC:12929 ProteinModelPortal:J3KT13
Ensembl:ENST00000579882 Ensembl:ENST00000585100 Uniprot:J3KT13
Length = 257
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|G3MWR7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104499 EMBL:DAAA02055413 OMA:WEAELQG
Ensembl:ENSBTAT00000062975 Uniprot:G3MWR7
Length = 509
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK--ECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+ T +C H FC CI + + + +CP C K + KR
Sbjct: 10 LQEEMICPICLDILQDPATI-DCGHNFCLSCITQSGEAADSVLKCPLCNK--IVKRDT-I 65
Query: 99 DPNFDL--LISKIY---PSRDEYEAHQVRVLEKLNKSH 131
PN+ L L+ KI PS + E ++R L K H
Sbjct: 66 TPNWLLVNLVEKIQAMDPSDMQPETEELRCLRHGEKCH 103
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 23 TPQEAITDNTE---IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
TPQ + ++ + + P L S+ CPICL L++ + T C HRFC CI+ ++R
Sbjct: 46 TPQSLVLEDVQGYDVEFDP-PLESKYECPICLMALREAVQTP-CGHRFCKACILKSIRDA 103
Query: 80 NKECPTCRKKLVSKRSLRADPNF---DLLISKIY-PSRDEYEAHQVRVLEK 126
+CP + L+ + L D NF ++L ++ PS+ E ++R LE+
Sbjct: 104 GHKCPVDNESLMENQ-LFPD-NFAKREILSLRVKCPSQGCTETMELRHLER 152
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECPTCRKKLVSKRSLRADPNF 102
L CPICL+++K+ ++TK C H FC C++ L + G +CP C+ + ++KRSL+ F
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRSLQGSTRF 79
Query: 103 DLLISKI 109
L ++
Sbjct: 80 SQLAEEL 86
>UNIPROTKB|Q3KNV8 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 EMBL:CH471131 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 CTD:10336 KO:K11488 EMBL:AJ001019 EMBL:BC107061
IPI:IPI00007279 IPI:IPI00827991 RefSeq:NP_006306.2
UniGene:Hs.144309 UniGene:Hs.731755 ProteinModelPortal:Q3KNV8
SMR:Q3KNV8 IntAct:Q3KNV8 STRING:Q3KNV8 PhosphoSite:Q3KNV8
DMDM:121942537 PRIDE:Q3KNV8 Ensembl:ENST00000362003
Ensembl:ENST00000470161 Ensembl:ENST00000505655 GeneID:10336
KEGG:hsa:10336 UCSC:uc003gbe.3 GeneCards:GC04P000691
HGNC:HGNC:10066 HPA:HPA018487 neXtProt:NX_Q3KNV8 PharmGKB:PA34433
InParanoid:Q3KNV8 OMA:THLKKFI OrthoDB:EOG49ZXPZ ChiTaRS:PCGF3
GenomeRNAi:10336 NextBio:39203 ArrayExpress:Q3KNV8 Bgee:Q3KNV8
CleanEx:HS_PCGF3 Genevestigator:Q3KNV8 Uniprot:Q3KNV8
Length = 242
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/128 (27%), Positives = 53/128 (41%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVRVL-EKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D ++ K+ P E E + R KL ++ + L S HR TK
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQREFYHKLGMEVPGDIKGETCSAKQHLDS-HRNGETK 128
Query: 157 KNIQGNEE 164
+ N+E
Sbjct: 129 ADDSSNKE 136
>UNIPROTKB|Q7ZX20 [details] [associations]
symbol:rnf8-a "E3 ubiquitin-protein ligase RNF8-A"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 EMBL:BC046256
RefSeq:NP_001080384.1 UniGene:Xl.75515 HSSP:O76064
ProteinModelPortal:Q7ZX20 SMR:Q7ZX20 PRIDE:Q7ZX20 GeneID:380076
KEGG:xla:380076 CTD:380076 Xenbase:XB-GENE-6254223
HOVERGEN:HBG023954 KO:K10667 Uniprot:Q7ZX20
Length = 540
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK-RSLRAD 99
L +EL C IC + + +T C H FCS CI + + +ECP CR+++V++ RSL D
Sbjct: 376 LDNELQCIICSEHFIEAVTLN-CAHSFCSYCI-KSWKKRKEECPICRQEIVTETRSLVLD 433
Query: 100 PNFDLLISKIYPSRDEYEAHQV-RVLEKLNKSHSQAALVQS 139
D ++ K+ P A + E + S LV S
Sbjct: 434 NCIDSMVDKLSPEMKNRRAALILERKEMVQAEESNPVLVVS 474
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 109 (43.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 5 EQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKE-- 62
E G W+ + L +A+ +N V RS +EL CP+CL ++ T E
Sbjct: 38 EDLGLVVDWD---HHLPPPAAKAVVENLPRTVI-RSSQAELKCPVCLLEFEEEETAIEMP 93
Query: 63 CLHRFCSDCIITALRSGNKECPTCRKKL 90
C H F S+CI+ L N CP CR +L
Sbjct: 94 CRHLFHSNCILPWLSKTNS-CPLCRHEL 120
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/94 (30%), Positives = 40/94 (42%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
+ + + C IC L K T ECLH FC CI+ N +CP C ++ L
Sbjct: 10 KDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGIQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
R D + +I K+ P E E + K NK
Sbjct: 69 LRLDNTLEEIIFKLVPGLREQELERESEFWKKNK 102
>DICTYBASE|DDB_G0278183 [details] [associations]
symbol:DDB_G0278183 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0278183 GO:GO:0046872
EMBL:AAFI02000023 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_642185.1 ProteinModelPortal:Q54YL7
EnsemblProtists:DDB0204482 GeneID:8621392 KEGG:ddi:DDB_G0278183
eggNOG:NOG260802 InParanoid:Q54YL7 ProtClustDB:CLSZ2430764
Uniprot:Q54YL7
Length = 601
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLR 97
P + EL C ICL L + + + C FC+ C++ G CP+C K++++K L
Sbjct: 15 PIEIDKELECSICLLPLFEPVVEQNCGSMFCNQCLLNNFNIGKNNCPSC-KQIINKNKLS 73
Query: 98 ADPNF-----DLLISKIYPSRDEYEAHQVRVLEKLN--KSHSQ 133
P D L+ +D Y ++++ + +L K+HS+
Sbjct: 74 NPPKIITNKLDELLVYCIQCKDNYPENEIKYMTRLYFIKNHSE 116
>UNIPROTKB|E1BYN8 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
KO:K11489 OMA:FYQSYPM CTD:84333 EMBL:AADN02027727 IPI:IPI00603520
RefSeq:XP_421668.1 UniGene:Gga.14951 ProteinModelPortal:E1BYN8
Ensembl:ENSGALT00000010507 GeneID:423796 KEGG:gga:423796
NextBio:20826216 Uniprot:E1BYN8
Length = 256
Score = 120 (47.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 29/94 (30%), Positives = 40/94 (42%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
+ + + C IC L K T ECLH FC CI+ N +CP C ++ L
Sbjct: 10 KDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
R D + +I K+ P E E + K NK
Sbjct: 69 LRLDNTLEEIIFKLVPGLREQELQREIEFWKKNK 102
>UNIPROTKB|Q86SE9 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6
OMA:FYQSYPM CTD:84333 EMBL:AK303014 EMBL:AL832003 EMBL:AL832496
EMBL:BC007377 EMBL:BC051845 IPI:IPI00328390 IPI:IPI00449145
RefSeq:NP_001243478.1 RefSeq:NP_001244030.1 RefSeq:NP_115749.2
UniGene:Hs.500512 ProteinModelPortal:Q86SE9 SMR:Q86SE9
IntAct:Q86SE9 STRING:Q86SE9 PhosphoSite:Q86SE9 DMDM:74750353
PRIDE:Q86SE9 DNASU:84333 Ensembl:ENST00000336126
Ensembl:ENST00000371687 Ensembl:ENST00000543648 GeneID:84333
KEGG:hsa:84333 UCSC:uc001khh.3 GeneCards:GC10P092979
HGNC:HGNC:28264 HPA:HPA038349 neXtProt:NX_Q86SE9
PharmGKB:PA134929149 InParanoid:Q86SE9 PhylomeDB:Q86SE9
ChiTaRS:PCGF5 GenomeRNAi:84333 NextBio:74097 Bgee:Q86SE9
CleanEx:HS_PCGF5 Genevestigator:Q86SE9 Uniprot:Q86SE9
Length = 256
Score = 120 (47.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 29/88 (32%), Positives = 38/88 (43%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---RADPN 101
+ C IC L K T ECLH FC CI+ N +CP C ++ L R D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEMLRLDNT 74
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+ +I K+ P E E + K NK
Sbjct: 75 LEEIIFKLVPGLREQELERESEFWKKNK 102
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 29/88 (32%), Positives = 38/88 (43%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---RADPN 101
+ C IC L K T ECLH FC CI+ N +CP C ++ L R D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEMLRLDNT 74
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+ +I K+ P E E + K NK
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNK 102
>MGI|MGI:99161 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IGI] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001739 "sex chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016604
"nuclear body" evidence=IDA] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0035102 "PRC1 complex" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:99161 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 OMA:DRDEKKG EMBL:D90085 EMBL:AF483502
EMBL:AF483503 EMBL:BC016419 IPI:IPI00316639 PIR:A37991
RefSeq:NP_001156779.1 RefSeq:NP_001156780.1 RefSeq:NP_033571.1
UniGene:Mm.2418 ProteinModelPortal:P23798 SMR:P23798 DIP:DIP-37645N
IntAct:P23798 MINT:MINT-1172293 STRING:P23798 PhosphoSite:P23798
PRIDE:P23798 Ensembl:ENSMUST00000018681 Ensembl:ENSMUST00000103148
Ensembl:ENSMUST00000169807 Ensembl:ENSMUST00000179765 GeneID:22658
KEGG:mmu:22658 InParanoid:P23798 ChiTaRS:PCGF2 NextBio:303067
Bgee:P23798 CleanEx:MM_PCGF2 Genevestigator:P23798
GermOnline:ENSMUSG00000018537 Uniprot:P23798
Length = 342
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>RGD|1305097 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0001739 "sex
chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0016573 "histone
acetylation" evidence=IEA;ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=IEA;ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1305097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
EMBL:CH473948 GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 EMBL:BC167059 IPI:IPI00191064
RefSeq:NP_001099306.1 UniGene:Rn.11826 SMR:B2RZ82 STRING:B2RZ82
Ensembl:ENSRNOT00000017241 GeneID:287662 KEGG:rno:287662
UCSC:RGD:1305097 NextBio:626761 Genevestigator:B2RZ82
Uniprot:B2RZ82
Length = 342
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|E1BMR4 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 GO:GO:0001739 CTD:7703 KO:K11460 OMA:DRDEKKG
UniGene:Bt.62403 EMBL:DAAA02049098 IPI:IPI00698887
RefSeq:NP_001137578.1 ProteinModelPortal:E1BMR4
Ensembl:ENSBTAT00000015331 GeneID:505147 KEGG:bta:505147
NextBio:20867002 Uniprot:E1BMR4
Length = 344
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|J9NUE7 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03006484 EMBL:AAEX03006485
Ensembl:ENSCAFT00000048828 Uniprot:J9NUE7
Length = 344
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|P35227 [details] [associations]
symbol:PCGF2 "Polycomb group RING finger protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0043066 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0016567
GO:GO:0000122 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 GO:GO:0004842 GO:GO:0048704 GO:GO:0016604
InterPro:IPR017907 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102
UniGene:Hs.713595 GO:GO:0001739 EMBL:D13969 EMBL:BX647429
EMBL:BC004858 EMBL:BC024255 IPI:IPI00017302 PIR:JN0717
RefSeq:NP_009075.1 UniGene:Hs.371617 ProteinModelPortal:P35227
SMR:P35227 DIP:DIP-41880N IntAct:P35227 MINT:MINT-158325
STRING:P35227 PhosphoSite:P35227 DMDM:462585 PRIDE:P35227
DNASU:7703 Ensembl:ENST00000360797 Ensembl:ENST00000580830
Ensembl:ENST00000581345 GeneID:7703 KEGG:hsa:7703 UCSC:uc002hqp.1
CTD:7703 GeneCards:GC17M036890 HGNC:HGNC:12929 HPA:HPA047732
MIM:600346 neXtProt:NX_P35227 PharmGKB:PA37516 InParanoid:P35227
KO:K11460 OMA:DRDEKKG GenomeRNAi:7703 NextBio:29858 Bgee:P35227
CleanEx:HS_PCGF2 Genevestigator:P35227 GermOnline:ENSG00000056661
Uniprot:P35227
Length = 344
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 23 TPQEAITDNTE---IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG 79
TPQ + + + P L S+ CPICL L++ + T C HRFC CI+ +LR
Sbjct: 46 TPQSLEVEEVQGYDVEFDP-PLESKYECPICLMALREAVQTP-CGHRFCKACIVKSLRDA 103
Query: 80 NKECPTCRKKLVSKRSLRADPNF---DLLISKIY-PSRDEYEAHQVRVLEK 126
+CP +++ + L D NF ++L K+ PS+ E ++R LE+
Sbjct: 104 GHKCPV-DNEILMENQLFPD-NFAKREILSLKVKCPSQGCTETMELRHLER 152
>UNIPROTKB|F6RV66 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:DAAA02018497 IPI:IPI00704748
Ensembl:ENSBTAT00000039422 Uniprot:F6RV66
Length = 186
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 47 CPICLDMLK------KTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
CPIC+D + + + EC H FCS C+ +L++ N CPTCRKK+ KR
Sbjct: 128 CPICMDGYSEIVQNGRLIVSTECGHIFCSQCLRDSLKNANT-CPTCRKKMSHKR 180
>UNIPROTKB|E2QY05 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:DRDEKKG EMBL:AAEX03006484
EMBL:AAEX03006485 Ensembl:ENSCAFT00000026210 Uniprot:E2QY05
Length = 348
Score = 122 (48.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + NK CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVH 61
Query: 92 SKR---SLRADPNFDLLISKIYPS--RDE 115
R S+R+D ++ K+ P +DE
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDE 90
>UNIPROTKB|F1PTU1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000011620 Uniprot:F1PTU1
Length = 252
Score = 119 (46.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/94 (30%), Positives = 40/94 (42%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
+ + + C IC L K T ECLH FC CI+ N +CP C ++ L
Sbjct: 10 KDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGIQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
R D + +I K+ P E E + K NK
Sbjct: 69 LRLDNTLEEIIFKLVPGLREQELERESEFWKKNK 102
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E++CPICLD+L+K +T +C H FC CI I G +CP C K V K ++R
Sbjct: 10 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC-KTSVRKNAIRF 67
Query: 99 DPNFDLLISKI 109
+ L+ KI
Sbjct: 68 NSLLRNLVEKI 78
>UNIPROTKB|F1PTT1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 KO:K11489 OMA:FYQSYPM CTD:84333
EMBL:AAEX03015404 EMBL:AAEX03015405 EMBL:AAEX03015406
RefSeq:XP_543923.2 ProteinModelPortal:F1PTT1
Ensembl:ENSCAFT00000011621 GeneID:486794 KEGG:cfa:486794
Uniprot:F1PTT1
Length = 256
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/94 (30%), Positives = 40/94 (42%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
+ + + C IC L K T ECLH FC CI+ N +CP C ++ L
Sbjct: 10 KDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGIQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
R D + +I K+ P E E + K NK
Sbjct: 69 LRLDNTLEEIIFKLVPGLREQELERESEFWKKNK 102
>MGI|MGI:1923505 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1923505
Pfam:PF00097 Prosite:PS00518 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6 OMA:FYQSYPM
CTD:84333 EMBL:AK002387 EMBL:AK017984 EMBL:AK146133 EMBL:BC139258
EMBL:BC139259 EMBL:BC145590 IPI:IPI00135919 IPI:IPI00653832
RefSeq:NP_083784.1 UniGene:Mm.259180 UniGene:Mm.381165
UniGene:Mm.488093 UniGene:Mm.490414 ProteinModelPortal:Q3UK78
SMR:Q3UK78 IntAct:Q3UK78 PhosphoSite:Q3UK78 PRIDE:Q3UK78
Ensembl:ENSMUST00000062389 Ensembl:ENSMUST00000071267 GeneID:76073
KEGG:mmu:76073 UCSC:uc008hhi.1 UCSC:uc008hhk.1 InParanoid:Q3UK78
NextBio:344549 Bgee:Q3UK78 CleanEx:MM_PCGF5 Genevestigator:Q3UK78
Uniprot:Q3UK78
Length = 256
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/88 (32%), Positives = 38/88 (43%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---RADPN 101
+ C IC L K T ECLH FC CI+ N +CP C ++ L R D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEMLRLDNT 74
Query: 102 FDLLISKIYPSRDEYEAHQVRVLEKLNK 129
+ +I K+ P E E + K NK
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNK 102
>UNIPROTKB|F1NLH3 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AADN02014962 IPI:IPI00683734
Ensembl:ENSGALT00000032038 Uniprot:F1NLH3
Length = 196
Score = 115 (45.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 17 MYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLHRFCSD 70
+Y ++ +E E A S + CPIC+D + + + +C H FCS
Sbjct: 108 VYVTDKVSRELGPLEDETASSNTRPSGTVSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQ 167
Query: 71 CIITALRSGNKECPTCRKKLVSKR 94
C+ +LR+ N CPTCRKKL ++
Sbjct: 168 CLRDSLRNANS-CPTCRKKLTHRQ 190
>UNIPROTKB|I7GGX8 [details] [associations]
symbol:TRIM31 "Tripartite motif protein 31 isoform beta"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AB158487 UniGene:Ssc.26008 UniGene:Ssc.83065
ProteinModelPortal:I7GGX8 Ensembl:ENSSSCT00000035521 Uniprot:I7GGX8
Length = 411
Score = 122 (48.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
L E++CPIC+D+L+ T +C H FC CI+ + R G +CP C K +V + ++R
Sbjct: 10 LQEEVICPICMDILQDPATI-DCGHSFCLQCIMRS-REGLDSVIKCPLCNK-IVKRDTIR 66
Query: 98 ADPNFDL--LISKIY---PSRDEYEAHQVR 122
PN+ L L+ KI PS ++ E +++
Sbjct: 67 --PNWLLVNLVEKIQAMDPSEEQPEVKELK 94
>DICTYBASE|DDB_G0273535 [details] [associations]
symbol:mip1-2 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 7 SGTTKSWELSM-YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLH 65
S ++ W+L E ++AI D +S + E CPIC + K ++T C H
Sbjct: 462 SENSELWKLQKEMEKENESKKAI-DTQSNGGDKKSKNLE--CPICFEDTKPYVSTL-CGH 517
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCSDCI+ AL+ K CP C KL K+
Sbjct: 518 IFCSDCIVNALKK-KKSCPVCNAKLHGKK 545
>DICTYBASE|DDB_G0273399 [details] [associations]
symbol:mip1-1 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 7 SGTTKSWELSM-YELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLH 65
S ++ W+L E ++AI D +S + E CPIC + K ++T C H
Sbjct: 462 SENSELWKLQKEMEKENESKKAI-DTQSNGGDKKSKNLE--CPICFEDTKPYVSTL-CGH 517
Query: 66 RFCSDCIITALRSGNKECPTCRKKLVSKR 94
FCSDCI+ AL+ K CP C KL K+
Sbjct: 518 IFCSDCIVNALKK-KKSCPVCNAKLHGKK 545
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + P
Sbjct: 46 LDKDLLCPICMQIIKDAFLTA-CGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQLY---P 100
Query: 101 NF--DLLISK 108
NF D L+ K
Sbjct: 101 NFLLDKLLKK 110
>MGI|MGI:106657 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070206
"protein trimerization" evidence=ISO] [GO:0090086 "negative
regulation of protein deubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:106657 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
eggNOG:NOG276395 HOVERGEN:HBG001357 OrthoDB:EOG4KWJSP EMBL:L27990
IPI:IPI00331738 UniGene:Mm.321227 PDB:2VOK PDB:2VOL PDBsum:2VOK
PDBsum:2VOL ProteinModelPortal:Q62191 SMR:Q62191 STRING:Q62191
PhosphoSite:Q62191 PRIDE:Q62191 HOGENOM:HOG000234134
InParanoid:Q62191 EvolutionaryTrace:Q62191 CleanEx:MM_TRIM21
Genevestigator:Q62191 GermOnline:ENSMUSG00000030966 Uniprot:Q62191
Length = 470
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 28 ITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
++ +T +S + E+ C ICLD + + M+ EC H FC +CI ++G CP CR
Sbjct: 1 MSPSTTSKMSLEKMWEEVTCSICLDPMVEPMSI-ECGHCFCKECIFEVGKNGGSSCPECR 59
Query: 88 KKLVSKRSLRADPN 101
++ + R+LR PN
Sbjct: 60 QQFLL-RNLR--PN 70
>ZFIN|ZDB-GENE-060810-140 [details] [associations]
symbol:trim105 "tripartite motif containing 105"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060810-140 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 OMA:VEPMRIC EMBL:CR627495
IPI:IPI00993660 Ensembl:ENSDART00000080247 ArrayExpress:F1QCZ4
Bgee:F1QCZ4 Uniprot:F1QCZ4
Length = 426
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 37 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSKR 94
S SL +L C IC ++ K+ + C+H FC CI++ +S CP CR++ +K
Sbjct: 6 SKTSLREDLTCAICFELFKEPVMLG-CMHHFCRRCIVSYWKSVRSPVTCPQCRQEFPNKC 64
Query: 95 SLRADPNFDLLISKIYPSRDEYEAHQVRVLEK-LNKS-HSQAALVQSINEGIKLQSQ--H 150
+ + L+ K+ R V+ LEK LN SQ ++ + I+
Sbjct: 65 CFQTNYLVANLVEKV---RASSSPASVKYLEKELNDCLESQCSMKDAYISMIRKDKDKME 121
Query: 151 RLQRTKKNIQGNEEN 165
++++T +QG N
Sbjct: 122 KIKKTGAELQGRVHN 136
>UNIPROTKB|H3BPQ8 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BPQ8 SMR:H3BPQ8 Ensembl:ENST00000563313
Bgee:H3BPQ8 Uniprot:H3BPQ8
Length = 89
Score = 99 (39.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/56 (39%), Positives = 27/56 (48%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKK 89
+ P+ SE C C D+L TT C H FC C+ S K ECP CR+K
Sbjct: 22 STGPQISVSEFSCHCCYDILVNP-TTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>UNIPROTKB|H3BRQ5 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
Ensembl:ENST00000570219 Bgee:H3BRQ5 Uniprot:H3BRQ5
Length = 109
Score = 99 (39.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/56 (39%), Positives = 27/56 (48%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKK 89
+ P+ SE C C D+L TT C H FC C+ S K ECP CR+K
Sbjct: 22 STGPQISVSEFSCHCCYDILVNP-TTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALR--SGNKE-CPTCRKKLVSKRS 95
RSL E+ C ICLD L+ +T +C H FC C T +R SG++ CP C+K K +
Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI-DCGHVFCRSCT-TDVRPISGSRPVCPLCKKPF-KKEN 64
Query: 96 LR 97
+R
Sbjct: 65 IR 66
>UNIPROTKB|F1ND52 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AADN02014962 IPI:IPI00578455 Ensembl:ENSGALT00000025265
Uniprot:F1ND52
Length = 190
Score = 113 (44.8 bits), Expect = 0.00010, P = 0.00010
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 17 MYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLK------KTMTTKECLHRFCSD 70
+Y ++ +E E A S S + CPIC+D + + + +C H FCS
Sbjct: 104 VYVTDKVSRELGPLEDETASSKPS--GTVSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQ 161
Query: 71 CIITALRSGNKECPTCRKKLVSKR 94
C+ +LR+ N CPTCRKKL ++
Sbjct: 162 CLRDSLRNANS-CPTCRKKLTHRQ 184
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 34/94 (36%), Positives = 45/94 (47%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSKRSLRA 98
S + CP+C D+ K T C H FC +C+ RS N +ECP CR RS A
Sbjct: 4 SAKDDYTCPVCQDIFK-TPVILSCGHSFCQECLQQCWRSENTQECPVCRT-----RSSIA 57
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHS 132
DP +L + + E+H L+K NK HS
Sbjct: 58 DPPVNLALQNLC------ESH----LKKRNKRHS 81
>ASPGD|ASPL0000049992 [details] [associations]
symbol:AN2256 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15711 HOGENOM:HOG000172619
EMBL:AACD01000037 RefSeq:XP_659860.1 ProteinModelPortal:Q5BB24
EnsemblFungi:CADANIAT00008948 GeneID:2874756 KEGG:ani:AN2256.2
OMA:IVGVRYY OrthoDB:EOG4G1QQQ Uniprot:Q5BB24
Length = 972
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
+ S+ +CPICLD+L+ + T C H F DCI + +K CP CR ++ +K SL A P
Sbjct: 724 IESQEICPICLDILETPVITA-CAHAFDHDCIEQVIVRQHK-CPICRAEIENKSSLVA-P 780
Query: 101 NFDLLISKIYPSRD-EYEAHQVRVLEKLNKSHSQAALVQSI 140
DL + S D + + ++ L K+ +H Q +++
Sbjct: 781 AADLGENTDDVSADPDNPSSKIEALIKILTAHGQVEATKTV 821
>UNIPROTKB|K7GRY7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104499
EMBL:CT737425 Ensembl:ENSSSCT00000035216 Uniprot:K7GRY7
Length = 544
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
L E++CPIC+D+L+ T +C H FC CI+ + R G +CP C K +V + ++R
Sbjct: 10 LQEEVICPICMDILQDPATI-DCGHSFCLQCIMRS-REGLDSVIKCPLCNK-IVKRDTIR 66
Query: 98 ADPNFDL--LISKIY---PSRDEYEAHQVR 122
PN+ L L+ KI PS ++ E +++
Sbjct: 67 --PNWLLVNLVEKIQAMDPSEEQPEVKELK 94
>UNIPROTKB|J9P325 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AAEX03002650
Ensembl:ENSCAFT00000044431 Uniprot:J9P325
Length = 269
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 35/137 (25%), Positives = 54/137 (39%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR-VLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D ++ K+ P E E + R KL ++ + L HR TK
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQRDFYHKLGMEVPGDVKGETCSAKQHLDP-HRNGETK 128
Query: 157 KNIQGNEENTPDISNTD 173
+ N+E + D
Sbjct: 129 ADDSSNKEAAEEKQEED 145
>UNIPROTKB|B6ICU7 [details] [associations]
symbol:TRIM31 "Tripartite motif-containing protein 31"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 CTD:11074 eggNOG:NOG310139 HOVERGEN:HBG083771
KO:K12011 OrthoDB:EOG4K0QNJ GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AP009553 RefSeq:XP_001928015.3
Ensembl:ENSSSCT00000001348 GeneID:100154496 KEGG:ssc:100154496
OMA:HDSITET Uniprot:B6ICU7
Length = 576
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
L E++CPIC+D+L+ T +C H FC CI+ + R G +CP C K +V + ++R
Sbjct: 10 LQEEVICPICMDILQDPATI-DCGHSFCLQCIMRS-REGLDSVIKCPLCNK-IVKRDTIR 66
Query: 98 ADPNFDL--LISKIY---PSRDEYEAHQVR 122
PN+ L L+ KI PS ++ E +++
Sbjct: 67 --PNWLLVNLVEKIQAMDPSEEQPEVKELK 94
>UNIPROTKB|F1RYH5 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:11074 KO:K12011 GeneTree:ENSGT00700000104499 EMBL:CU607067
RefSeq:NP_001193331.1 UniGene:Ssc.26008 UniGene:Ssc.83065
Ensembl:ENSSSCT00000001357 GeneID:100154124 KEGG:ssc:100154124
OMA:WEAELQG Uniprot:F1RYH5
Length = 576
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK---ECPTCRKKLVSKRSLR 97
L E++CPIC+D+L+ T +C H FC CI+ + R G +CP C K +V + ++R
Sbjct: 10 LQEEVICPICMDILQDPATI-DCGHSFCLQCIMRS-REGLDSVIKCPLCNK-IVKRDTIR 66
Query: 98 ADPNFDL--LISKIY---PSRDEYEAHQVR 122
PN+ L L+ KI PS ++ E +++
Sbjct: 67 --PNWLLVNLVEKIQAMDPSEEQPEVKELK 94
>RGD|1565844 [details] [associations]
symbol:RGD1565844 "similar to RIKEN cDNA 1700045I19"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 RGD:1565844 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 KO:K10668 OrthoDB:EOG4J9N0K
EMBL:CH474014 IPI:IPI00209881 RefSeq:NP_001101725.1
UniGene:Rn.11609 Ensembl:ENSRNOT00000020999 GeneID:317486
KEGG:rno:317486 UCSC:RGD:1565844 CTD:317486 OMA:NTETYPE
NextBio:671867 Uniprot:D3ZI70
Length = 247
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E + S + CPIC ++ K + C H FC C +TA++ CP CR V+
Sbjct: 4 EESASTSYTEDDFYCPICQEVFKTPVRVAACQHVFCRKCFLTAMKESRIHCPLCRGN-VT 62
Query: 93 KRSLRADPN--FDL-LISKIYP 111
+R RA P DL I + +P
Sbjct: 63 RRE-RACPERALDLETIMRSFP 83
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC CI+ G+ CP C +
Sbjct: 4 AASLAQLQAEASCPICLDYLQDPVTT-DCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPD 62
Query: 93 KRSLR 97
RSLR
Sbjct: 63 -RSLR 66
>UNIPROTKB|Q90X96 [details] [associations]
symbol:brca1 "Breast and ovarian cancer susceptibility
protein" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 CTD:672
KO:K10605 InterPro:IPR025994 Pfam:PF12820 HSSP:P38398 EMBL:AF416868
RefSeq:NP_001084248.1 UniGene:Xl.12105 ProteinModelPortal:Q90X96
SMR:Q90X96 IntAct:Q90X96 GeneID:399391 KEGG:xla:399391
Xenbase:XB-GENE-6254021 HOVERGEN:HBG073951 Uniprot:Q90X96
Length = 1579
Score = 129 (50.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITAL---RSGNKECPTCRKKLVSKRSLR 97
+ L CPICL+++K+ + TK C H FC C++ L + G CP C+ + V++RSL+
Sbjct: 18 MQKNLECPICLELMKEPVATK-CDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 98 ADPNFDLLI 106
F LL+
Sbjct: 76 ESHRFKLLV 84
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 128 NKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
NKS+S A + E I + R++ T KN
Sbjct: 629 NKSNSNAVKEMNEQENIAQIPEFRVKDTNKN 659
>UNIPROTKB|D6RAL3 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00967311
ProteinModelPortal:D6RAL3 SMR:D6RAL3 Ensembl:ENST00000510806
ArrayExpress:D6RAL3 Bgee:D6RAL3 Uniprot:D6RAL3
Length = 79
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCR 87
L CP+CL+ L + C H FC C++ + S N+ CP CR
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECR 53
>UNIPROTKB|D6RHX5 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00966916
ProteinModelPortal:D6RHX5 SMR:D6RHX5 Ensembl:ENST00000502315
ArrayExpress:D6RHX5 Bgee:D6RHX5 Uniprot:D6RHX5
Length = 99
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCR 87
L CP+CL+ L + C H FC C++ + S N+ CP CR
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECR 53
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITAL--RSGNKECP 84
L CPICL+++K+ ++TK C H FC C++ L + G +CP
Sbjct: 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCP 62
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 35/137 (25%), Positives = 54/137 (39%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 55 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 113
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR-VLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D ++ K+ P E E + R KL ++ + L HR TK
Sbjct: 114 HDRTMQDIVYKLVPGLQEAEMRKQRDFYHKLGMEVPGDVKGETCSAKQHLDP-HRNGETK 172
Query: 157 KNIQGNEENTPDISNTD 173
+ N+E + D
Sbjct: 173 ADDSSNKEAAEEKQEED 189
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 49/157 (31%), Positives = 75/157 (47%)
Query: 7 SGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHR 66
SGTT + LS + E I ++ P L S+ CPICL L++ + T C HR
Sbjct: 37 SGTTSTGNLSSSFM-----EEI-QGYDVEFDP-PLESKYECPICLMALREAVQTP-CGHR 88
Query: 67 FCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL--LISKIYPSRDEYEAH--QVR 122
FC CII ++R +CP + L+ + L D NF ++S + +E H ++R
Sbjct: 89 FCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD-NFAKREILSLMVKCPNEGCLHKMELR 146
Query: 123 VLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
LE ++ H + AL+ LQ Q Q+ + NI
Sbjct: 147 HLED-HQLHCEFALMNC------LQCQRTFQKCQLNI 176
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKL 90
+ +CP+CL++ + MTT +C H FC+DC+ LR + C CR L
Sbjct: 19 DFVCPVCLEIFVRPMTT-QCGHTFCNDCLQECLRPQSPVCAVCRTDL 64
>MGI|MGI:1916837 [details] [associations]
symbol:Pcgf3 "polycomb group ring finger 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916837
Pfam:PF00097 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:10336 KO:K11488 OMA:THLKKFI
OrthoDB:EOG49ZXPZ EMBL:AK033609 EMBL:AK089091 EMBL:BC049266
IPI:IPI00225141 IPI:IPI00471142 RefSeq:NP_766304.2
UniGene:Mm.261218 UniGene:Mm.486543 ProteinModelPortal:Q8BTQ0
SMR:Q8BTQ0 IntAct:Q8BTQ0 PhosphoSite:Q8BTQ0 PRIDE:Q8BTQ0
Ensembl:ENSMUST00000046975 Ensembl:ENSMUST00000112597 GeneID:69587
KEGG:mmu:69587 UCSC:uc008yod.1 UCSC:uc008yoe.1 InParanoid:Q8BTQ0
NextBio:329856 Bgee:Q8BTQ0 CleanEx:MM_PCGF3 Genevestigator:Q8BTQ0
Uniprot:Q8BTQ0
Length = 241
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR 122
D ++ K+ P E E + R
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQR 94
>UNIPROTKB|Q2KJ29 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC105550 IPI:IPI00718391 RefSeq:NP_001040032.1
UniGene:Bt.13972 ProteinModelPortal:Q2KJ29 SMR:Q2KJ29 PRIDE:Q2KJ29
GeneID:615967 KEGG:bta:615967 CTD:10336 InParanoid:Q2KJ29 KO:K11488
NextBio:20899886 Uniprot:Q2KJ29
Length = 242
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR 122
D ++ K+ P E E + R
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQR 94
>UNIPROTKB|F5H012 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC009758
HGNC:HGNC:11312 IPI:IPI01012950 ProteinModelPortal:F5H012
SMR:F5H012 PRIDE:F5H012 Ensembl:ENST00000543625 ArrayExpress:F5H012
Bgee:F5H012 Uniprot:F5H012
Length = 475
Score = 119 (46.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K +LR PN
Sbjct: 13 EVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK-NLR--PNRQ 68
Query: 104 L 104
L
Sbjct: 69 L 69
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 149 QHRLQRTKKNIQGNEE 164
Q RL T+++I GNEE
Sbjct: 308 QVRLGDTQQSIPGNEE 323
>UNIPROTKB|P19474 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0031648 "protein
destabilization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=IDA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 PDB:2IWG PDBsum:2IWG EMBL:AC009758
CTD:6737 eggNOG:NOG276395 HOGENOM:HOG000234133 HOVERGEN:HBG001357
KO:K10651 OrthoDB:EOG4KWJSP EMBL:M34551 EMBL:U01882 EMBL:M62800
EMBL:U13658 EMBL:U13657 EMBL:AF391283 EMBL:AY742713 EMBL:BC010861
IPI:IPI00018971 IPI:IPI00969571 PIR:A55642 RefSeq:NP_003132.2
UniGene:Hs.532357 ProteinModelPortal:P19474 SMR:P19474
IntAct:P19474 MINT:MINT-1462811 STRING:P19474 PhosphoSite:P19474
DMDM:133250 PaxDb:P19474 PRIDE:P19474 DNASU:6737
Ensembl:ENST00000254436 GeneID:6737 KEGG:hsa:6737 UCSC:uc001lyy.1
GeneCards:GC11M004406 HGNC:HGNC:11312 HPA:CAB004566 HPA:HPA005673
MIM:109092 neXtProt:NX_P19474 PharmGKB:PA36136 InParanoid:P19474
OMA:IAMKRAD EvolutionaryTrace:P19474 GenomeRNAi:6737 NextBio:26280
ArrayExpress:P19474 Bgee:P19474 CleanEx:HS_TRIM21
Genevestigator:P19474 GermOnline:ENSG00000132109 Uniprot:P19474
Length = 475
Score = 119 (46.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E+ CPICLD + ++ EC H FC +CI + G CP CR++ + K +LR PN
Sbjct: 13 EVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCRQRFLLK-NLR--PNRQ 68
Query: 104 L 104
L
Sbjct: 69 L 69
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 149 QHRLQRTKKNIQGNEE 164
Q RL T+++I GNEE
Sbjct: 308 QVRLGDTQQSIPGNEE 323
>DICTYBASE|DDB_G0279263 [details] [associations]
symbol:DDB_G0279263 "E3 ubiquitin-protein ligase
CHFR" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 dictyBase:DDB_G0279263 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000030
InterPro:IPR017907 eggNOG:NOG253207 RefSeq:XP_641760.1
ProteinModelPortal:Q54X17 EnsemblProtists:DDB0205685 GeneID:8621958
KEGG:ddi:DDB_G0279263 InParanoid:Q54X17 OMA:HICEQTK Uniprot:Q54X17
Length = 742
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 35/149 (23%), Positives = 63/149 (42%)
Query: 21 NRTPQEAITDNTEIAVSPR-----SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITA 75
N TP + T T A ++ L+C IC D++ K +T C+H FC C
Sbjct: 373 NNTPTKTTTTTTTTATKKEIDIEETIGENLICGICQDIIYKCLTLIPCMHNFCV-CCYGD 431
Query: 76 LRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAA 135
R+ + +CP CR+ + S + A N L K P + + ++ ++K K +
Sbjct: 432 WRANSMDCPQCRQSVKSAQKNHAINNLIELYLKKNPEKVR-DPEELESMDKRCKITDEML 490
Query: 136 LVQSINEGIKLQSQHRLQRTKKNIQGNEE 164
S+N+ + + ++ +EE
Sbjct: 491 KNGSLNKSSRKYDNDEYEDEDEDYSEDEE 519
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCII-----TALRSGNKECPTCR 87
++ E+ CPICL++L + ++ +C H FC C+ + L G CP CR
Sbjct: 8 NVKEEVTCPICLELLTQPLSL-DCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSKRSLR 97
+L E CPICL+ LK +T C H FC C+ + + + CP CR K S R
Sbjct: 9 NLQEESSCPICLEYLKDPVTIN-CGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYK-SFR 66
Query: 98 ADP 100
+P
Sbjct: 67 RNP 69
>ZFIN|ZDB-GENE-060512-34 [details] [associations]
symbol:pcgf5b "polycomb group ring finger 5b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060512-34 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 KO:K11489 OrthoDB:EOG4NKBW6
EMBL:BC116619 IPI:IPI00630550 RefSeq:NP_001038700.1
UniGene:Dr.78700 ProteinModelPortal:Q1JPS1 SMR:Q1JPS1 STRING:Q1JPS1
Ensembl:ENSDART00000086211 GeneID:692252 KEGG:dre:692252 CTD:692252
InParanoid:Q1JPS1 OMA:FYQSYPM NextBio:20902468 Bgee:Q1JPS1
Uniprot:Q1JPS1
Length = 232
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 27/85 (31%), Positives = 37/85 (43%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL-- 96
R + + C +C L K T ECLH FC CI+ N +CP C ++ L
Sbjct: 10 RDFNHFITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSN-DCPKCGIQVHETNPLEM 68
Query: 97 -RADPNFDLLISKIYPSRDEYEAHQ 120
R D + +I K+ P E E Q
Sbjct: 69 LRLDNTLEEVIFKLVPGLREKEQQQ 93
>UNIPROTKB|Q07G17 [details] [associations]
symbol:pcgf3 "Polycomb group RING finger protein 3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:10336 KO:K11488
EMBL:CR855442 RefSeq:NP_001016847.1 UniGene:Str.21149
ProteinModelPortal:Q07G17 SMR:Q07G17 GeneID:549601 KEGG:xtr:549601
Xenbase:XB-GENE-987640 Uniprot:Q07G17
Length = 242
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVR 122
D ++ K+ P E E + R
Sbjct: 70 HDRTMQDIVYKLVPGLQEAEMRKQR 94
>DICTYBASE|DDB_G0270568 [details] [associations]
symbol:DDB_G0270568 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0270568 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5432
RefSeq:XP_646094.2 ProteinModelPortal:Q55DN7
EnsemblProtists:DDB0201772 GeneID:8617044 KEGG:ddi:DDB_G0270568
InParanoid:Q55DN7 OMA:VPPSFIN ProtClustDB:CLSZ2445168
Uniprot:Q55DN7
Length = 419
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 30 DNT-EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRK 88
DN ++++ +SL ++ CPICL+ +++ +T C H FC C+ + +K CP C K
Sbjct: 7 DNELDLSIPVKSLLEDISCPICLNFIEEC-STLSCGHNFCHKCVSECINRNHK-CPLCNK 64
Query: 89 KLVSKRSLRADPNFDLLISKI 109
+ K ++ + F+ +I I
Sbjct: 65 TAL-KENIYRNHQFEKIIKII 84
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L CPICL ++ + MT C H FC C+ L S CPTC+++L + + N L
Sbjct: 2 LECPICLFLMCEPMTMS-CGHSFCRRCMGAFLPS---RCPTCKERLKQRDAKNIKNNVLL 57
Query: 105 --LISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKL 146
+I K P + + H + EKL S AL + +EGI++
Sbjct: 58 FSIIEKCCPEETKMKCH---IQEKLKTSEFTEAL-RIADEGIEM 97
>RGD|1307403 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000151 "ubiquitin ligase complex" evidence=ISO] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006959 "humoral immune
response" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=ISO] [GO:0016574
"histone ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030890
"positive regulation of B cell proliferation" evidence=ISO]
[GO:0031519 "PcG protein complex" evidence=ISO] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=ISO] [GO:0035102 "PRC1 complex" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0048103 "somatic stem cell division" evidence=ISO] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISO] [GO:0071535 "RING-like zinc finger domain
binding" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 RGD:1307403 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00870411 Ensembl:ENSRNOT00000022315
UCSC:RGD:1307403 Uniprot:D3ZLC8
Length = 200
Score = 111 (44.1 bits), Expect = 0.00023, P = 0.00023
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 102 (41.0 bits), Expect = 0.00023, P = 0.00023
Identities = 30/82 (36%), Positives = 39/82 (47%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--C 83
EA A + +L E C +CL+ LK+ + EC H FC CI ++ C
Sbjct: 8 EAGASAASTAAALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPC 66
Query: 84 PTCRKKLVSK-RSLRADPNFDL 104
P CRK S+ RSLR PN L
Sbjct: 67 PVCRK--TSRYRSLR--PNRQL 84
>DICTYBASE|DDB_G0278935 [details] [associations]
symbol:rad18 "C3HC4-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00513
dictyBase:DDB_G0278935 Prosite:PS00518 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 EMBL:AAFI02000024
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0008094 KO:K10695 RefSeq:XP_641970.2
ProteinModelPortal:Q54XR0 EnsemblProtists:DDB0304878 GeneID:8621702
KEGG:ddi:DDB_G0278935 eggNOG:NOG328594 InParanoid:Q54XR0
OMA:IHANECL Uniprot:Q54XR0
Length = 668
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR-----KKLVSKRSLRAD 99
L CPIC D M +C H +CS CI +L S + CP+CR +LV+ R L
Sbjct: 17 LKCPICYDFFNTAMMIPKCSHNYCSFCIRQSL-SFKEFCPSCRISCNATQLVNNRQLDLI 75
Query: 100 -PNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKN 158
N+ LI +I + + Q ++ +++ H + L N+ + Q Q + Q+ ++
Sbjct: 76 VQNYKSLIKEISKQKQSLQNQQNQIQDQI-LLHLK--LENQFNQQQQQQQQQQQQQQQQQ 132
Query: 159 IQGNEE 164
Q ++
Sbjct: 133 QQQQQQ 138
>UNIPROTKB|E1BGL7 [details] [associations]
symbol:TRIM40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
OMA:HYKERLN EMBL:DAAA02055413 IPI:IPI00906997
Ensembl:ENSBTAT00000009916 Uniprot:E1BGL7
Length = 245
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALR----SGNKECPTCRKKLVSKRSLRAD 99
E +CPIC + LK+ + T +C H FC C+ L SG + CP CRK S+ L A
Sbjct: 11 EGICPICQECLKEAVRT-DCGHLFCRACLAQHLEKASASGVRSCPLCRKPC-SEGVLGAG 68
Query: 100 PNFDLLISKIYPSRDEYE---AHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK 156
D K Y +E + RV + +KSH + + +I+ K + + R++R
Sbjct: 69 YTCDSPQKKAYWFCEESRRLLCMECRVTPE-HKSHCELPIENAISH-YKERLEGRIKRLN 126
Query: 157 KNIQ 160
+ I+
Sbjct: 127 RRIR 130
>RGD|1308035 [details] [associations]
symbol:Rnf8 "ring finger protein 8, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric
region" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006302 "double-strand break repair" evidence=ISO;ISS]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO;ISS] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=ISO;ISS] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030496
"midbody" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0033522 "histone H2A ubiquitination"
evidence=ISO;ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0042393 "histone binding" evidence=ISO;ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISO;ISS]
[GO:0043486 "histone exchange" evidence=ISO;ISS] [GO:0045190
"isotype switching" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO;ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISO;ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA;ISO] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070535 "histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO;ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
RGD:1308035 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 CTD:9025 HOGENOM:HOG000154169
PANTHER:PTHR15067:SF3 EMBL:BC099079 IPI:IPI00372827
RefSeq:NP_001020898.1 UniGene:Rn.12463 ProteinModelPortal:Q4KLN8
SMR:Q4KLN8 PRIDE:Q4KLN8 Ensembl:ENSRNOT00000065629 GeneID:361815
KEGG:rno:361815 UCSC:RGD:1308035 NextBio:677706 ArrayExpress:Q4KLN8
Genevestigator:Q4KLN8 Uniprot:Q4KLN8
Length = 487
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 19 ELNRTPQEA--ITDNTEIAVSPRS--LHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
EL RT +E + E +S + L +EL C IC + + +T C H FCS CI
Sbjct: 373 ELERTKEEKDKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN-CAHSFCSFCISE 431
Query: 75 ALRSGNKECPTCRKKLVSK-RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
++ ECP CRK + S+ SL D ++ ++ S D E V + E+ K
Sbjct: 432 WMKR-KVECPICRKDIESRTNSLVLDNCISKMVERL--SSDVKERRSVLIRERRAK 484
>UNIPROTKB|Q5T8Z1 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0016574 GO:GO:0033092
GO:GO:0021903 GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643590 SMR:Q5T8Z1
IntAct:Q5T8Z1 Ensembl:ENST00000417470 Uniprot:Q5T8Z1
Length = 207
Score = 111 (44.1 bits), Expect = 0.00026, P = 0.00026
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 95 (38.5 bits), Expect = 0.00027, P = 0.00027
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 26 EAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--C 83
EA A + +L E C +CL+ LK+ + EC H FC CI ++ C
Sbjct: 8 EAGASAASTAAALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPC 66
Query: 84 PTCRK 88
P CRK
Sbjct: 67 PVCRK 71
>UNIPROTKB|J3QRB8 [details] [associations]
symbol:RNF112 "RING finger protein 112" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004448
HGNC:HGNC:12968 Ensembl:ENST00000575165 Uniprot:J3QRB8
Length = 123
Score = 95 (38.5 bits), Expect = 0.00027, P = 0.00027
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSK 93
++PR L + C ICL+ L+ ++ +C H FC C T G + CP CRK K
Sbjct: 49 MAPRELPT---CSICLERLRDPISL-DCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQK 104
Query: 94 RSLRA 98
R LR+
Sbjct: 105 RGLRS 109
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
EL CPICL + ++ C H FC+ CI+ +++ + CP C K +R +R P+ D
Sbjct: 13 ELKCPICLSLYNSAVSLS-CNHVFCNACIVKSMKM-DATCPVC-KIPYHRREIRGAPHMD 69
Query: 104 LLISKIYPSRDE 115
L+S IY + ++
Sbjct: 70 SLVS-IYKNMED 80
>UNIPROTKB|Q640D5 [details] [associations]
symbol:bmi1b "Polycomb complex protein BMI-1-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
KO:K11459 EMBL:BC082694 RefSeq:NP_001088007.1 UniGene:Xl.49729
ProteinModelPortal:Q640D5 SMR:Q640D5 GeneID:494698 KEGG:xla:494698
CTD:494698 Xenbase:XB-GENE-942193 Uniprot:Q640D5
Length = 323
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 36/117 (30%), Positives = 50/117 (42%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH-QVRVLEKLNKSHSQAA 135
R L RAD ++ K+ P RD Y AH V N+ + A
Sbjct: 62 KTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFYAAHPSVDAANGSNEDRGEVA 118
>UNIPROTKB|A0JN86 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489
OrthoDB:EOG4NKBW6 OMA:FYQSYPM EMBL:BC126565 IPI:IPI00698156
RefSeq:NP_001071448.1 UniGene:Bt.59906 ProteinModelPortal:A0JN86
SMR:A0JN86 PRIDE:A0JN86 Ensembl:ENSBTAT00000006533 GeneID:528946
KEGG:bta:528946 CTD:84333 InParanoid:A0JN86
BioCyc:CATTLE:528946-MONOMER NextBio:20874930 Uniprot:A0JN86
Length = 255
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSL---RADPN 101
+ C IC L K T ECLH FC CI+ N +CP C ++ L R D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEMLRLDNT 74
Query: 102 FDLLISKIYPS-RDEYE 117
+ +I K+ P R++ E
Sbjct: 75 LEEIIFKLVPGLREQLE 91
>UNIPROTKB|Q91648 [details] [associations]
symbol:bmi1a "Polycomb complex protein BMI-1-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
KO:K11459 EMBL:U39959 EMBL:BC072892 PIR:I51694
RefSeq:NP_001081790.1 UniGene:Xl.6636 ProteinModelPortal:Q91648
SMR:Q91648 GeneID:398052 KEGG:xla:398052 CTD:398052
Xenbase:XB-GENE-6252040 Uniprot:Q91648
Length = 326
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 36/117 (30%), Positives = 50/117 (42%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH-QVRVLEKLNKSHSQAA 135
R L RAD ++ K+ P RD Y AH V N+ + A
Sbjct: 62 KTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFYAAHPSADVANGSNEDRGEVA 118
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC C++ G+ CP C +
Sbjct: 4 AASLAQLQAEASCPICLDYLRDPVTT-DCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPD 62
Query: 93 KRSLR 97
RSLR
Sbjct: 63 -RSLR 66
>FB|FBgn0002283 [details] [associations]
symbol:l(3)73Ah "lethal (3) 73Ah" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:AE014296 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
eggNOG:NOG277991 KO:K11488 OMA:THLKKFI EMBL:AY071030 PIR:JC4296
RefSeq:NP_001246797.1 RefSeq:NP_524933.1 UniGene:Dm.1746 SMR:Q9VV77
IntAct:Q9VV77 MINT:MINT-320154 STRING:Q9VV77
EnsemblMetazoa:FBtr0075311 EnsemblMetazoa:FBtr0307336 GeneID:48903
KEGG:dme:Dmel_CG4195 UCSC:CG4195-RA FlyBase:FBgn0002283
InParanoid:Q9VV77 OrthoDB:EOG47PVNS ChiTaRS:l(3)73Ah
GenomeRNAi:48903 NextBio:839572 Uniprot:Q9VV77
Length = 222
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 33 EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS 92
E V ++++ + C IC T ECLH FC C++ L K CPTC +
Sbjct: 2 ERRVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEE-KKTCPTCDNIIHQ 60
Query: 93 KRSLRA---DPNFDLLISKIYPSRDEYEAHQVR 122
L+ D ++ K+ P E E+ + R
Sbjct: 61 SHPLQYISFDRTMQDIVYKLVPKLQEDESRRER 93
>ZFIN|ZDB-GENE-081031-1 [details] [associations]
symbol:trim35-33 "tripartite motif containing 35-33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-1 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU539057 EMBL:CU861903 IPI:IPI00486447 RefSeq:XP_001342275.1
Ensembl:ENSDART00000146662 GeneID:100002502 KEGG:dre:100002502
NextBio:20785475 Uniprot:F1R7D2
Length = 459
Score = 111 (44.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSKRSLRA 98
S + +CP+C D+ K T C H FC +C+ RS N +ECP CR+ RS +
Sbjct: 4 SAEYDYICPVCQDIFK-TPVILSCSHSFCQECLQQFWRSKNTQECPVCRR-----RSSKG 57
Query: 99 DPNFDLLISKI 109
P +L + +
Sbjct: 58 HPPVNLALKNL 68
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 106 ISKIYPSRDEYEAHQVRVL-EKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNIQ 160
IS++ P++ E ++ L EKL ++ + IK Q++H ++ K+ +
Sbjct: 124 ISEVVPAKKEELNIALKSLQEKLKRNEKVKGEFERAARHIKAQAEHTERQIKQQFE 179
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + L D
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD- 120
Query: 101 NFDL--LISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALV 137
NF ++S + +E H ++R LE +++H + ALV
Sbjct: 121 NFAKREILSLMVKCPNEGCLHKMELRHLED-HQAHCEFALV 160
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + L D
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD- 120
Query: 101 NFDL--LISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALV 137
NF ++S + +E H ++R LE +++H + ALV
Sbjct: 121 NFAKREILSLMVKCPNEGCLHKMELRHLED-HQAHCEFALV 160
>UNIPROTKB|F1RWB4 [details] [associations]
symbol:LOC100737099 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000009702 OMA:KISGHES Uniprot:F1RWB4
Length = 440
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 34/106 (32%), Positives = 47/106 (44%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC C++ G+ CP C +
Sbjct: 1 AASLAQLQAEASCPICLDYLRDPVTT-DCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPD 59
Query: 93 KRSLRADPNFDLLIS--KIYPSRDEYEAHQVRVLEKLNKSHSQAAL 136
RSLR + ++ K P+ E E Q K H +L
Sbjct: 60 -RSLRRNTQLCHMVDVVKQLPNT-EGEGKQQEEKPLCEKHHQVLSL 103
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + L D
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD- 120
Query: 101 NF---DLLISKIY-PSRDEYEAHQVRVLEKLNKSHSQAALV 137
NF ++L + P++ + ++R LE ++ H + ALV
Sbjct: 121 NFAKREILSLTVKCPNKGCLQKMELRHLED-HQVHCEFALV 160
>UNIPROTKB|F1RWB2 [details] [associations]
symbol:TRIM61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:CU693419 Ensembl:ENSSSCT00000009704 OMA:ISDHIST Uniprot:F1RWB2
Length = 460
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC CI+ G+ CP C +
Sbjct: 4 AASLAQLQAEASCPICLDYLQDPVTT-DCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPD 62
Query: 93 KRSLR 97
RSLR
Sbjct: 63 -RSLR 66
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 103 (41.3 bits), Expect = 0.00040, P = 0.00040
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTK---ECLHRFCSDCIITALRSGNKECPTCRK 88
P S + E+ CP+CL ++ K + K C+H F +CI L S + CP CR+
Sbjct: 82 PESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLES-HATCPVCRR 134
>FB|FBgn0005624 [details] [associations]
symbol:Psc "Posterior sex combs" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003677
"DNA binding" evidence=IDA;NAS] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006342 "chromatin silencing" evidence=IDA;NAS]
[GO:0035102 "PRC1 complex" evidence=IDA;TAS] [GO:0005725
"intercalary heterochromatin" evidence=NAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035186 "syncytial blastoderm mitotic
cell cycle" evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0005704 "polytene chromosome band" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 EMBL:AE013599 GO:GO:0007411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0001047 GO:GO:0006342 InterPro:IPR017907 GO:GO:0035186
eggNOG:NOG304672 GeneTree:ENSGT00550000074463 KO:K11459
GO:GO:0035102 GO:GO:0005704 GO:GO:0005725 EMBL:X59275 EMBL:DQ022542
PIR:S17983 RefSeq:NP_523725.2 UniGene:Dm.2703
ProteinModelPortal:P35820 SMR:P35820 IntAct:P35820 STRING:P35820
PaxDb:P35820 EnsemblMetazoa:FBtr0087798 GeneID:36431
KEGG:dme:Dmel_CG3886 CTD:100653366 FlyBase:FBgn0005624
InParanoid:P35820 OMA:RCEMVIN OrthoDB:EOG4FFBGZ PhylomeDB:P35820
ChiTaRS:Psc GenomeRNAi:36431 NextBio:798535 Bgee:P35820
GermOnline:CG3886 Uniprot:P35820
Length = 1601
Score = 121 (47.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 23 TPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE 82
T + T + V +++ ++C +C L T ECLH FC C+I LR +
Sbjct: 239 TTSDLATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERF 297
Query: 83 CPTCRKKLVS-KRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK 126
CP C + + K ++++D ++ K+ P E E + R K
Sbjct: 298 CPRCEMVINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYK 342
Score = 46 (21.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 255 VDHLTKYLTMRLRLEGSDICDSNFGIYVSPSSNNFILLPGNQSLRQIHDKY-WKSEKPLE 313
V HL K++ + ++ F I + +LL +L I Y WK + P+
Sbjct: 408 VSHLKKFVYDKFEIDAQ-----RFSIDIMYKVKTIVLLD-YYTLMDIAYIYTWKRDAPMR 461
Query: 314 VYY 316
YY
Sbjct: 462 FYY 464
>UNIPROTKB|Q2T9Z0 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9913 "Bos taurus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:BC111201
IPI:IPI01027953 RefSeq:NP_001098481.1 UniGene:Bt.91974
ProteinModelPortal:Q2T9Z0 STRING:Q2T9Z0 PRIDE:Q2T9Z0 GeneID:618634
KEGG:bta:618634 CTD:51127 eggNOG:NOG317461 InParanoid:Q2T9Z0
KO:K12007 NextBio:20901287 Uniprot:Q2T9Z0
Length = 475
Score = 100 (40.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 38/112 (33%), Positives = 55/112 (49%)
Query: 30 DNTEIAVSPRSLHSELMCPICLDMLKK-TMTTKECLHRFCSDCI-IT----------ALR 77
D E+A R L E C ICLD MTT C H FC +CI +T R
Sbjct: 2 DAVELA---RKLQEEATCSICLDYFTDPVMTT--CGHNFCRECIQLTWEKARGQKKRRKR 56
Query: 78 SGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNK 129
G+ CP CR+ L +R+LR PN L++K+ ++ + Q R L ++++
Sbjct: 57 KGSFPCPECRE-LSPQRNLR--PN--RLLTKVAEMVRQHPSPQSRDLCQVHR 103
Score = 57 (25.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 122 RVLEKLNKSHSQA-ALVQSINEGIKLQSQHRLQRTKKNIQGNEENTP 167
R+L+ L K + A +Q +K QS H L+R ++ E+TP
Sbjct: 202 RLLQALKKEEEETVAKLQESTASLKQQS-HSLERLLLQLEDRNEHTP 247
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 111 (44.1 bits), Expect = 0.00043, P = 0.00043
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRA-- 98
+++ + C +C L T ECLH FC C++ L N CPTCR + L+
Sbjct: 11 INAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNT-CPTCRIVIHQSHPLQYIG 69
Query: 99 -DPNFDLLISKIYPSRDEYEAHQVRVLEK 126
D ++ K+ P E +R LEK
Sbjct: 70 HDRTMQDIVYKLVPGLQE---GNLRRLEK 95
>RGD|1359645 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
RGD:1359645 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX883051 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OrthoDB:EOG4W9J4P
IPI:IPI00422032 RefSeq:NP_001009175.1 UniGene:Rn.215808
ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8 GeneID:365528
KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8 NextBio:687589
Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT----ALRSGNKECPTCRK 88
P ++ +CPICLD LK+ ++T +C H FC C+I A SG CP CRK
Sbjct: 3 PLDKDNQDICPICLDPLKEAVST-DCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>UNIPROTKB|Q6MFY8 [details] [associations]
symbol:Trim40 "Tripartite motif-containing protein 40"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 RGD:1359645 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX883051 CTD:135644
eggNOG:NOG263238 HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016
OrthoDB:EOG4W9J4P IPI:IPI00422032 RefSeq:NP_001009175.1
UniGene:Rn.215808 ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8
GeneID:365528 KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8
NextBio:687589 Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 38 PRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT----ALRSGNKECPTCRK 88
P ++ +CPICLD LK+ ++T +C H FC C+I A SG CP CRK
Sbjct: 3 PLDKDNQDICPICLDPLKEAVST-DCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>UNIPROTKB|F1LUK5 [details] [associations]
symbol:Ftsjd2 "Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR000467 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50089 PROSITE:PS50174 SMART:SM00184 SMART:SM00240
SMART:SM00443 RGD:1307801 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
PANTHER:PTHR15067:SF3 IPI:IPI00777795 PRIDE:F1LUK5
Ensembl:ENSRNOT00000000641 ArrayExpress:F1LUK5 Uniprot:F1LUK5
Length = 748
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 42/138 (30%), Positives = 63/138 (45%)
Query: 19 ELNRTPQEA--ITDNTEIAVSPRS--LHSELMCPICLDMLKKTMTTKECLHRFCSDCIIT 74
EL RT +E + E +S + L +EL C IC + +T C H FCS CI
Sbjct: 403 ELERTKEEKDKVQAQKEEVLSHMNDVLENELQCIICSEYFIDAVTLN-CAHSFCSFCISE 461
Query: 75 ALRSGNKECPTCRKKLVSK-RSLRADPNFDLLISKIYPSRDEYEAHQVRVLEK------L 127
++ ECP CRK + S+ SL D ++ ++ S D E V + E+ L
Sbjct: 462 WMKR-KVECPICRKDIESRTNSLVLDNCISKMVERL--SSDVKERRSVLIRERRASTTSL 518
Query: 128 NKSHSQAALVQSINEGIK 145
+ S S+ Q ++G K
Sbjct: 519 SGSDSETEGKQPCSDGFK 536
>UNIPROTKB|I3LP53 [details] [associations]
symbol:LOC100621782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003356978.1
Ensembl:ENSSSCT00000028301 GeneID:100621782 KEGG:ssc:100621782
OMA:ESIHIRY Uniprot:I3LP53
Length = 460
Score = 117 (46.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 35/106 (33%), Positives = 47/106 (44%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC CI+ G+ CP C +
Sbjct: 4 AASLAQLQAETSCPICLDYLQDPVTT-DCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPD 62
Query: 93 KRSLRADPNFDLLIS--KIYPSRDEYEAHQVRVLEKLNKSHSQAAL 136
RSLR + ++ K P+ E E Q K H +L
Sbjct: 63 -RSLRRNTQLCHMVDVVKQLPNT-EGEGKQQEEKPLCEKHHQVLSL 106
Score = 37 (18.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 298 LRQIHDKYWKSEKPLEVYYSWKK 320
+ +IH Y E P Y KK
Sbjct: 252 IERIHSTYENLESPAGFSYELKK 274
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 106 (42.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCII-----TALRSGNKECPTCRKKLVSKR 94
++ E+ CPICL++L + ++ +C H FC CI + L G + CP CR S+
Sbjct: 8 NIKEEVTCPICLELLTEPLSL-DCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSE- 65
Query: 95 SLRADPNFDLLISKI 109
+LR + + ++ ++
Sbjct: 66 NLRPNRHLANIVERL 80
Score = 50 (22.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 117 EAHQVRVLEKLNKSHSQAALVQSINEGIKLQS-QHRLQRTKKNI-QGNEENTPDISN 171
E + +L++L +S + L Q+ + G+ + +HRLQ + + QG +E + N
Sbjct: 205 EKEEKNILKRLTQSENDMVL-QTQSMGVLISDLEHRLQGSVMELLQGVDEVIKRVKN 260
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + L D
Sbjct: 65 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD- 121
Query: 101 NFDL--LISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALV 137
NF ++S + +E H ++R LE+ +++H + AL+
Sbjct: 122 NFAKREILSLMVKCPNEGCLHKMELRHLEE-HQAHCEFALM 161
>TAIR|locus:2064392 [details] [associations]
symbol:DRIP2 "DREB2A-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 eggNOG:NOG277991
HOGENOM:HOG000240404 KO:K16277 ProtClustDB:CLSN2688579 EMBL:U93215
EMBL:AY045618 EMBL:BT000505 IPI:IPI00544240 PIR:B84710
RefSeq:NP_565702.1 UniGene:At.14726 ProteinModelPortal:Q94AY3
SMR:Q94AY3 IntAct:Q94AY3 EnsemblPlants:AT2G30580.1 GeneID:817608
KEGG:ath:AT2G30580 TAIR:At2g30580 InParanoid:Q94AY3 OMA:NASHNDV
PhylomeDB:Q94AY3 Genevestigator:Q94AY3 Uniprot:Q94AY3
Length = 420
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKL--VSKRSLRADPN 101
+ CP+C +L+ T ECLH FC CI + E CP C L LR D
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHI 77
Query: 102 FDLLISKIYP-SRDEYEAHQVRV---LEKLNKSHSQAALVQSINEGIKLQSQHRLQRTK- 156
L +K++P R + A +V L K S ++LV S + Q+ +RTK
Sbjct: 78 LQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPR-VSAQAGTTGKRTKA 136
Query: 157 ---KNIQGN 162
K+++G+
Sbjct: 137 ATRKDVRGS 145
>ZFIN|ZDB-GENE-060825-103 [details] [associations]
symbol:zgc:153151 "zgc:153151" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060825-103
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR318603 IPI:IPI00920283
Ensembl:ENSDART00000131053 GeneTree:ENSGT00700000105241 Bgee:E7F6W7
Uniprot:E7F6W7
Length = 471
Score = 112 (44.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 39 RSLH--SELMCPICLDMLKKTMTTKECLHRFCSDCIITAL-RSGNKECPTCRKKLVSKR 94
+SLH E CP+CLD+ +TT C H FC C+I S + CP C K+ SKR
Sbjct: 32 KSLHLTEECQCPVCLDVFTDPVTTP-CGHNFCKTCLIQCWDNSQDYRCPLC-KETFSKR 88
Score = 42 (19.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 281 YVSPSSNNFILLPGNQSLRQIHDKY-----WKSEKPLEVYYS 317
Y + +N L N +LR+I Y +K E+P+E YS
Sbjct: 163 YCKETFSNRPDLKCNTALREIVQLYEKNTDYKREQPMETEYS 204
>UNIPROTKB|F1PW68 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AAEX03006952
Ensembl:ENSCAFT00000035912 OMA:TMIVERD Uniprot:F1PW68
Length = 247
Score = 110 (43.8 bits), Expect = 0.00059, P = 0.00059
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E CPICL ++ T ++C H FC CI AL+ K CP C + + N
Sbjct: 61 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGR-FYGQLVGNQPQNGR 118
Query: 104 LLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
+L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 119 MLVSKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCP 173
Query: 160 QGNE 163
+GN+
Sbjct: 174 EGNK 177
>UNIPROTKB|B1AMY1 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0046872 GO:GO:0008270 GO:GO:0045121
GO:GO:0030163 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL355987 GO:GO:0033209 GO:GO:0046328 GO:GO:0009898
InterPro:IPR017907 GO:GO:0043623 GO:GO:0035631 GO:GO:0051023
GO:GO:0034351 HOGENOM:HOG000231558 EMBL:AL449425 UniGene:Hs.522506
HGNC:HGNC:12032 PANTHER:PTHR10131:SF21 OrthoDB:EOG4R502J
IPI:IPI00644377 SMR:B1AMY1 Ensembl:ENST00000414589 Uniprot:B1AMY1
Length = 121
Score = 92 (37.4 bits), Expect = 0.00059, P = 0.00059
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
L ++ +C C ++L++ +C HR+CS C+ + L SG + C C
Sbjct: 28 LEAKYLCSACRNVLRRPFQA-QCGHRYCSFCLASILSSGPQNCAAC 72
>UNIPROTKB|H3BUB3 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BUB3 SMR:H3BUB3 Ensembl:ENST00000566710
Bgee:H3BUB3 Uniprot:H3BUB3
Length = 141
Score = 99 (39.9 bits), Expect = 0.00060, P = 0.00060
Identities = 22/56 (39%), Positives = 27/56 (48%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKK 89
+ P+ SE C C D+L TT C H FC C+ S K ECP CR+K
Sbjct: 22 STGPQISVSEFSCHCCYDILVNP-TTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRAD 99
++ +EL C +C ++ +TT C H FC C+ AL N CP CR+KL S+R++
Sbjct: 197 TVRNELDCQVCYSLILDPLTTP-CGHTFCRRCVAMALSHSNL-CPICRRKLNMPSSVRSE 254
Query: 100 PN 101
N
Sbjct: 255 RN 256
>ZFIN|ZDB-GENE-080213-8 [details] [associations]
symbol:zgc:172170 "zgc:172170" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080213-8 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106887 EMBL:BC154568
IPI:IPI00882698 RefSeq:NP_001108175.1 UniGene:Dr.154576
ProteinModelPortal:A8WG40 GeneID:100137106 KEGG:dre:100137106
NextBio:20789400 Uniprot:A8WG40
Length = 453
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKK 89
S +L+CP+C ++ K T C H FC +C+ RS N +ECP CR+K
Sbjct: 4 SAEYDLICPVCHEIFK-TPVILSCSHSFCQECLQQFWRSKNTRECPVCRRK 53
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 101 (40.6 bits), Expect = 0.00066, P = 0.00066
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCR 87
L ++ CPICL++ + + C H FC +C+ L+ + CP CR
Sbjct: 6 LEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCR 52
>UNIPROTKB|F1RWB1 [details] [associations]
symbol:LOC100513607 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003129044.1
Ensembl:ENSSSCT00000009705 GeneID:100513607 KEGG:ssc:100513607
OMA:IERIYST Uniprot:F1RWB1
Length = 461
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 35 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRS--GNKECPTCRKKLVS 92
A S L +E CPICLD L+ +TT +C H FC C++ G+ CP C +
Sbjct: 4 AASLAQLQAEASCPICLDYLQDPVTT-DCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPD 62
Query: 93 KRSLR 97
RSLR
Sbjct: 63 -RSLR 66
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKR 94
L S+ CPICL L++ + T C HRFC CI+ +LR+ +CP + L+ K+
Sbjct: 66 LESKYECPICLMALREAVQTP-CGHRFCKACILKSLRNAGHKCPVDNEILMEKQ 118
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE-CPTCRKKLVSKRSLRADPN---F 102
CPICL+ L+ + T C HR C +C++ + R+ CP CR VSK+ L P F
Sbjct: 794 CPICLEALEDAVLTP-CAHRLCRECLLASWRNSTSGLCPVCRNT-VSKQELITAPTESRF 851
Query: 103 DLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL 136
+ + K + + A + LE L S S++ L
Sbjct: 852 QVDVEKNWVESSKITA-LLEELEGLRSSGSKSIL 884
>ZFIN|ZDB-GENE-030131-6013 [details] [associations]
symbol:rnf168 "ring finger protein 168"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0035518
"histone H2A monoubiquitination" evidence=ISS] [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0045190 "isotype switching"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0036351 "histone H2A-K13 ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0070530 "K63-linked polyubiquitin binding" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0036352 "histone
H2A-K15 ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-6013 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0006511 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 GO:GO:0035518 HSSP:P38398
GO:GO:0045900 GO:GO:0035861 GO:GO:0070530 CTD:165918
HOGENOM:HOG000154156 OrthoDB:EOG4THVT2 GO:GO:0070535 GO:GO:0036351
GO:GO:0036352 EMBL:BC053301 IPI:IPI00487711 RefSeq:NP_956149.1
UniGene:Dr.7739 ProteinModelPortal:Q7T308 STRING:Q7T308
GeneID:334081 KEGG:dre:334081 eggNOG:NOG292819 InParanoid:Q7T308
NextBio:20810256 ArrayExpress:Q7T308 Uniprot:Q7T308
Length = 474
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 24 PQEAITDNTEIAVSPRSL-HSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE 82
P + D + S L S+ +CP+CL++ + +T C+H FC C + + N
Sbjct: 2 PPVSEVDRGPVEESSGGLKRSDCVCPVCLEIFLEPVTLP-CMHTFCKPCFLETVDKSNMC 60
Query: 83 CPTCRKKL 90
CP CRK++
Sbjct: 61 CPLCRKRV 68
>POMBASE|SPBP8B7.15c [details] [associations]
symbol:SPBP8B7.15c "ubiquitin-protein ligase E3 RBBP6
family involved in mRNA cleavage (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=NAS] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 PomBase:SPBP8B7.15c
Prosite:PS00518 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006378 GO:GO:0003676 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF57756 GO:GO:0005847 GO:GO:0006379
eggNOG:COG5222 HOGENOM:HOG000162394 KO:K15541 OrthoDB:EOG4NGKWM
PIR:T40809 RefSeq:NP_596522.1 HSSP:Q9H3I8 ProteinModelPortal:O94264
SMR:O94264 STRING:O94264 EnsemblFungi:SPBP8B7.15c.1 GeneID:2541385
KEGG:spo:SPBP8B7.15c OMA:QKDPSRI NextBio:20802494 Uniprot:O94264
Length = 482
Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 14 ELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCII 73
+++ +E ++ + A+T N + P ++ L C +C + + T C FC +CI
Sbjct: 251 DVASWETYQSRKAALTANDVYKMQPPNI--SLACTLCKKLARNACRTPCCDKLFCEECIQ 308
Query: 74 TALRSGNKECPTCRKKLVSKRSLRAD 99
TAL + ECP C +K V +L D
Sbjct: 309 TALLDSDFECPNCHRKDVLLDTLNPD 334
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSK 93
VS L L CPICL++ K+ M +C H +C C+++ R + E CP C++++ S
Sbjct: 5 VSVPELEDRLQCPICLEVFKEPMML-QCGHSYCKGCLVSLSRHLDSELRCPVCQQEVDSS 63
Query: 94 RSLRADPNFDL 104
S PN L
Sbjct: 64 SS---PPNVSL 71
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 91 (37.1 bits), Expect = 0.00075, P = 0.00075
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 43 SELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVS--KRSLRADP 100
SE C IC+++L + +T C H C C + + + CP CR+++ S + R +
Sbjct: 12 SECQCGICMEILVEPVTLP-CNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNS 70
Query: 101 --NFDL--LISKIYP 111
N +L +I K YP
Sbjct: 71 LVNVELWTIIQKHYP 85
>MGI|MGI:2385051 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:2385051 Prosite:PS00518 GO:GO:0005739
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:CH466559 HOGENOM:HOG000234133
CTD:11074 eggNOG:NOG310139 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EMBL:AK033650 EMBL:BC026666 IPI:IPI00153211 RefSeq:NP_666189.1
UniGene:Mm.213417 HSSP:Q92021 ProteinModelPortal:Q8R0K2 SMR:Q8R0K2
STRING:Q8R0K2 PRIDE:Q8R0K2 Ensembl:ENSMUST00000078438 GeneID:224762
KEGG:mmu:224762 UCSC:uc008cll.1 GeneTree:ENSGT00700000104499
InParanoid:Q8R0K2 NextBio:377349 Bgee:Q8R0K2 Uniprot:Q8R0K2
Length = 507
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSKRSLRAD 99
L E+ CPIC+++L+ +T +C H FC CI ++ K +CP C K V+K + R +
Sbjct: 10 LQEEVTCPICMEILQDPVTI-DCGHNFCLQCISQVGKTSEKIQCPLC-KLSVNKNTFRPN 67
Query: 100 PNFDLLISKIY---PSRDEYEAHQVRVLEKLNKSH 131
L KI P+ + E R K H
Sbjct: 68 KLLASLAEKIQSMDPADIQAEKEDSRCQRHKEKLH 102
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 98 (39.6 bits), Expect = 0.00077, P = 0.00077
Identities = 28/88 (31%), Positives = 39/88 (44%)
Query: 5 EQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKE-- 62
E G W+ + L + + +N V R +EL CP+CL ++ T E
Sbjct: 38 EDLGLVVDWD---HHLPPPAAKTVVENLPRTVI-RGSQAELKCPVCLLEFEEEETAIEMP 93
Query: 63 CLHRFCSDCIITALRSGNKECPTCRKKL 90
C H F S CI+ L N CP CR +L
Sbjct: 94 CHHLFHSSCILPWLSKTNS-CPLCRYEL 120
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
L S+ CPICL L++ + T C HRFC CII ++R +CP + L+ + L D
Sbjct: 64 LESKYECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQ-LFPD- 120
Query: 101 NFDL--LISKIYPSRDEYEAH--QVRVLEKLNKSHSQAALV 137
NF ++S + +E H ++R LE +++H + AL+
Sbjct: 121 NFAKREILSLMVKCPNEGCLHKMELRHLED-HQAHCEFALM 160
>MGI|MGI:88174 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;IDA] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0009987 "cellular
process" evidence=TAS] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016574
"histone ubiquitination" evidence=IDA] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IMP] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IMP] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0033092 "positive regulation of immature T
cell proliferation in thymus" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IMP] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=ISO] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISO] [GO:0071535
"RING-like zinc finger domain binding" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 MGI:MGI:88174
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:M64067 EMBL:M64068 EMBL:M64279 EMBL:BC053708
EMBL:BC056384 IPI:IPI00114786 PIR:A39523 RefSeq:NP_031578.2
UniGene:Mm.289584 PDB:2CKL PDBsum:2CKL ProteinModelPortal:P25916
SMR:P25916 DIP:DIP-132N IntAct:P25916 STRING:P25916
PhosphoSite:P25916 PRIDE:P25916 Ensembl:ENSMUST00000028071
Ensembl:ENSMUST00000051929 GeneID:12151 KEGG:mmu:12151
InParanoid:P25916 EvolutionaryTrace:P25916 NextBio:280483
Bgee:P25916 CleanEx:MM_BMI1 Genevestigator:P25916
GermOnline:ENSMUSG00000026739 Uniprot:P25916
Length = 324
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|Q5SDR3 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 KO:K11459 CTD:648 EMBL:AY616032 IPI:IPI00591599
RefSeq:NP_001007989.1 UniGene:Gga.22845 ProteinModelPortal:Q5SDR3
SMR:Q5SDR3 GeneID:493647 KEGG:gga:493647 NextBio:20865453
Uniprot:Q5SDR3
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|Q32KX7 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9913
"Bos taurus" [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0051443 "positive regulation
of ubiquitin-protein ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0048103 "somatic stem
cell division" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0033092 "positive regulation of immature T cell
proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0043066 GO:GO:0007420 GO:GO:0005730
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 HSSP:P25916 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG EMBL:BC109871
IPI:IPI00710372 RefSeq:NP_001033161.1 UniGene:Bt.89241
ProteinModelPortal:Q32KX7 SMR:Q32KX7 STRING:Q32KX7 PRIDE:Q32KX7
Ensembl:ENSBTAT00000020705 GeneID:510666 KEGG:bta:510666 CTD:648
InParanoid:Q32KX7 OMA:SNHQSSF NextBio:20869556 GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
Uniprot:Q32KX7
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|E2RTM4 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 KO:K11459 CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AAEX03001194 RefSeq:XP_858578.1
ProteinModelPortal:E2RTM4 Ensembl:ENSCAFT00000006682 GeneID:487097
KEGG:cfa:487097 Uniprot:E2RTM4
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|P35226 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=IDA] [GO:0030097 "hemopoiesis" evidence=IEP]
[GO:0031519 "PcG protein complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0035102 "PRC1 complex" evidence=IDA]
[GO:0007379 "segment specification" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IMP] [GO:0010468 "regulation of
gene expression" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0007420 GO:GO:0005730 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 EMBL:CH471072
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0007379 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:L13689 EMBL:AK313235 EMBL:AL158211 EMBL:BC011652
EMBL:AH004292 IPI:IPI00017299 PIR:I54339 RefSeq:NP_001190991.1
RefSeq:NP_005171.4 UniGene:Hs.380403 UniGene:Hs.731287 PDB:2H0D
PDB:3RPG PDBsum:2H0D PDBsum:3RPG ProteinModelPortal:P35226
SMR:P35226 DIP:DIP-41879N IntAct:P35226 MINT:MINT-158260
STRING:P35226 PhosphoSite:P35226 DMDM:22258801 PaxDb:P35226
PRIDE:P35226 DNASU:648 Ensembl:ENST00000376663 GeneID:100532731
GeneID:648 KEGG:hsa:100532731 KEGG:hsa:648 UCSC:uc001irh.3
CTD:100532731 GeneCards:GC10P022605 HGNC:HGNC:1066 HPA:CAB011120
HPA:HPA030472 MIM:164831 neXtProt:NX_P35226 PharmGKB:PA25376
InParanoid:P35226 PhylomeDB:P35226 EvolutionaryTrace:P35226
NextBio:2628 ArrayExpress:P35226 Bgee:P35226 CleanEx:HS_BMI1
Genevestigator:P35226 GermOnline:ENSG00000168283 Uniprot:P35226
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|F2Z5D1 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IEA] [GO:0048103
"somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 OMA:SNHQSSF GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
EMBL:CU855495 EMBL:JQ012762 Ensembl:ENSSSCT00000012128
Uniprot:F2Z5D1
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|Q5R8L2 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 KO:K11459 CTD:648
OMA:SNHQSSF GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:CR859740 RefSeq:NP_001126098.1 UniGene:Pab.17470
ProteinModelPortal:Q5R8L2 SMR:Q5R8L2 PRIDE:Q5R8L2
Ensembl:ENSPPYT00000002567 GeneID:100173052 KEGG:pon:100173052
InParanoid:Q5R8L2 Uniprot:Q5R8L2
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>UNIPROTKB|Q9TST0 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9685
"Felis catus" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005737
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 CTD:648
EMBL:AJ132013 RefSeq:NP_001020133.1 ProteinModelPortal:Q9TST0
SMR:Q9TST0 GeneID:554342 KEGG:fca:554342 Uniprot:Q9TST0
Length = 326
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 32 TEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLV 91
T I ++ L+ LMC +C T ECLH FC CI+ L + +K CP C ++
Sbjct: 5 TRIKIT--ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 92 SKRSL---RADPNFDLLISKIYPS---------RDEYEAH 119
R L R+D ++ K+ P RD Y AH
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAH 101
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL 104
L+CP+C DM+K+ +K C H FC CII L S +K CP C L ++ PNF L
Sbjct: 154 LLCPVCNDMIKEPFISK-CGHSFCYQCIIIHL-SKSKTCPICMVYLTREQIF---PNFAL 208
Query: 105 --LISKI 109
+ KI
Sbjct: 209 NKFVEKI 215
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00082
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSG-NKECPTCRKKLVSKRSLRADPNF 102
E+ CPIC ++ K + C H FC +CI R+ ++ECP CR+ RS + DP
Sbjct: 8 EISCPICCEIFKSPILLS-CSHSFCKECIQQFWRTKISRECPVCRR-----RSSKDDPPS 61
Query: 103 DLLISKIYPSRDEYEAHQ 120
+L++ + + +H+
Sbjct: 62 NLVLKNLCELFERGRSHE 79
>CGD|CAL0004874 [details] [associations]
symbol:orf19.3407 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=IEA] [GO:0070987 "error-free translesion
synthesis" evidence=IEA] [GO:0042275 "error-free postreplication
DNA repair" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0031144 "proteasome localization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
CGD:CAL0004874 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
GO:GO:0003700 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL033391 EMBL:AACQ01000064
EMBL:AACQ01000065 RefSeq:XP_716657.1 RefSeq:XP_716717.1
ProteinModelPortal:Q5A4N5 STRING:Q5A4N5 GeneID:3641637
GeneID:3641662 KEGG:cal:CaO19.10910 KEGG:cal:CaO19.3407
eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599 Uniprot:Q5A4N5
Length = 378
Score = 112 (44.5 bits), Expect = 0.00083, P = 0.00083
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 28 ITDNTEIAVSPRSLHSEL----MCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
ITD ++ + +EL C IC D+L + T +C H +CS CI L N+ C
Sbjct: 6 ITDPSDFKTTKLPALAELDILKRCYICKDLLNAPVRT-QCDHTYCSQCIREFLLRDNR-C 63
Query: 84 PTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL--VQSIN 141
P C+ + V + L+ DP L+ +I S H +R+LE + K S+ + +S N
Sbjct: 64 PLCKTE-VFESGLKRDP----LLEEIVISYASLRPHLLRLLE-IEKVESKQEVDREKSAN 117
Query: 142 E 142
E
Sbjct: 118 E 118
>UNIPROTKB|Q5A4N5 [details] [associations]
symbol:RAD18 "Postreplication repair E3 ubiquitin-protein
ligase RAD18" species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR004580 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 CGD:CAL0004874 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003684 GO:GO:0016874 GO:GO:0008270
GO:GO:0006281 GO:GO:0003700 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL033391
EMBL:AACQ01000064 EMBL:AACQ01000065 RefSeq:XP_716657.1
RefSeq:XP_716717.1 ProteinModelPortal:Q5A4N5 STRING:Q5A4N5
GeneID:3641637 GeneID:3641662 KEGG:cal:CaO19.10910
KEGG:cal:CaO19.3407 eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599
Uniprot:Q5A4N5
Length = 378
Score = 112 (44.5 bits), Expect = 0.00083, P = 0.00083
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 28 ITDNTEIAVSPRSLHSEL----MCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKEC 83
ITD ++ + +EL C IC D+L + T +C H +CS CI L N+ C
Sbjct: 6 ITDPSDFKTTKLPALAELDILKRCYICKDLLNAPVRT-QCDHTYCSQCIREFLLRDNR-C 63
Query: 84 PTCRKKLVSKRSLRADPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAAL--VQSIN 141
P C+ + V + L+ DP L+ +I S H +R+LE + K S+ + +S N
Sbjct: 64 PLCKTE-VFESGLKRDP----LLEEIVISYASLRPHLLRLLE-IEKVESKQEVDREKSAN 117
Query: 142 E 142
E
Sbjct: 118 E 118
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00083
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 40 SLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGN-KECPTCRKKLVSKRSL 96
S +L CP+C D+ K T C H FC +C+ R+ N +ECP CR++ R L
Sbjct: 4 SAEYDLTCPVCQDIFK-TPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSSKDRPL 60
>TAIR|locus:2094608 [details] [associations]
symbol:AT3G23060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG304672 EMBL:AB026655 KO:K16277 EMBL:AY099845
EMBL:BT006623 IPI:IPI00546320 RefSeq:NP_188946.2 UniGene:At.37773
UniGene:At.67676 ProteinModelPortal:Q9LS86 SMR:Q9LS86 IntAct:Q9LS86
PRIDE:Q9LS86 EnsemblPlants:AT3G23060.1 GeneID:821880
KEGG:ath:AT3G23060 TAIR:At3g23060 HOGENOM:HOG000153088
InParanoid:Q9LS86 OMA:NKFINER PhylomeDB:Q9LS86
ProtClustDB:CLSN2917950 Genevestigator:Q9LS86 Uniprot:Q9LS86
Length = 480
Score = 109 (43.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 26/69 (37%), Positives = 30/69 (43%)
Query: 45 LMCPICLDMLKKTMTTKECLHRFCSDCIITA-LRSGNKECPTCRKKL--VSKRSLRADPN 101
L CPIC + K T ECLH FC CI + CP C L LR+D
Sbjct: 14 LACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCT 73
Query: 102 FDLLISKIY 110
+ L KIY
Sbjct: 74 WQDLKLKIY 82
Score = 44 (20.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 255 VDHLTKYLTMRLRLEGSD 272
V +L KYL ++L LE D
Sbjct: 398 VSYLKKYLMVKLGLESED 415
>UNIPROTKB|G3X823 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:DAAA02055411
Ensembl:ENSBTAT00000050226 Uniprot:G3X823
Length = 546
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 35 AVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLV 91
A +P RSL E+ C ICLD L+ +T +C H FC C I ++ G CP C+K
Sbjct: 3 ASAPLRSLEEEVTCSICLDYLRDPVTI-DCGHVFCRSCTTDIRSISGGRPVCPLCKKPF- 60
Query: 92 SKRSLR 97
K ++R
Sbjct: 61 KKENIR 66
>UNIPROTKB|G4N7F0 [details] [associations]
symbol:MGG_03582 "RING-14 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CM001234 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 RefSeq:XP_003716328.1 ProteinModelPortal:G4N7F0
EnsemblFungi:MGG_03582T0 GeneID:2676733 KEGG:mgr:MGG_03582
Uniprot:G4N7F0
Length = 461
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 27 AITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTC 86
A N ++ PR + CPIC+ + + C H FC C++ R G ++CP C
Sbjct: 348 AQVSNHVVSTVPRV--EDYSCPICMSIAWLPVRLA-CRHIFCVRCVVKMQRDGKRQCPMC 404
Query: 87 RKKLVSKRSLRADPNFDLL-ISKIYPSRDEYEAHQVRVLEK 126
R+ +V + LR + + DL +Y ++ E LE+
Sbjct: 405 RQNVVMQADLR-NLDHDLARFMGLYFKKETKEKQAANDLER 444
>MGI|MGI:1914914 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
UniPathway:UPA00143 MGI:MGI:1914914 Prosite:PS00518 GO:GO:0005829
GO:GO:0046872 GO:GO:0008270 Reactome:REACT_107772 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OrthoDB:EOG4SJ5FM
EMBL:AK006569 EMBL:AK050395 EMBL:AC138611 EMBL:BC094290
EMBL:BC116883 EMBL:BC116887 IPI:IPI00137236 IPI:IPI00269061
RefSeq:NP_080577.1 UniGene:Mm.45980 ProteinModelPortal:Q9D9R0
SMR:Q9D9R0 STRING:Q9D9R0 PhosphoSite:Q9D9R0 PRIDE:Q9D9R0
Ensembl:ENSMUST00000050004 GeneID:67664 KEGG:mmu:67664
UCSC:uc008eez.1 UCSC:uc008efa.1 InParanoid:Q0VG32 OMA:VPNENAN
ChiTaRS:RNF125 NextBio:325181 Bgee:Q9D9R0 CleanEx:MM_RNF125
Genevestigator:Q9D9R0 GermOnline:ENSMUSG00000033107 Uniprot:Q9D9R0
Length = 233
Score = 108 (43.1 bits), Expect = 0.00087, P = 0.00087
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSK 93
C +CL++L + + T+ C H FC CI T++++ NK CP CR L S+
Sbjct: 37 CSVCLEVLHQPVRTR-CGHVFCRSCIATSIKNNNKWTCPYCRAYLPSE 83
>RGD|1306757 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1306757 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473974
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OMA:RTRCGHV
OrthoDB:EOG4SJ5FM EMBL:BC162061 IPI:IPI00870006
RefSeq:NP_001101894.1 UniGene:Rn.163367 STRING:B1WCA3
Ensembl:ENSRNOT00000021136 GeneID:361296 KEGG:rno:361296
NextBio:675857 Genevestigator:B1WCA3 Uniprot:B1WCA3
Length = 233
Score = 108 (43.1 bits), Expect = 0.00087, P = 0.00087
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 47 CPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK-ECPTCRKKLVSK 93
C +CL++L + + T+ C H FC CI T++++ NK CP CR L S+
Sbjct: 37 CSVCLEVLHQPVRTR-CGHVFCRSCIATSIKNNNKWTCPYCRAYLPSE 83
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 113 (44.8 bits), Expect = 0.00088, P = 0.00088
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCI--ITALRSGNKECPTCRKKLVSKRSLRA 98
L E CPICLD L +T EC H FC CI A + CP CR + R+LR+
Sbjct: 10 LQKETKCPICLDDLTDPVTV-ECGHNFCRSCIKDFWAGQQATSSCPVCRHQC-QHRNLRS 67
Query: 99 DPNFDLLISKIYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQ 153
+ +I A ++ +E NK H + + N+ + L + LQ
Sbjct: 68 NAQLGNMIET---------AQLLQGME--NKRHESSTSCERHNQALTLFCEDDLQ 111
>TAIR|locus:2064945 [details] [associations]
symbol:AT2G38970 "AT2G38970" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
InterPro:IPR002035 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50234
SMART:SM00184 SMART:SM00327 EMBL:CP002685 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00529574
RefSeq:NP_850306.1 UniGene:At.37223 ProteinModelPortal:F4IU12
SMR:F4IU12 EnsemblPlants:AT2G38970.1 GeneID:818482
KEGG:ath:AT2G38970 OMA:KVARDGR Uniprot:F4IU12
Length = 692
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 4 TEQSGTTKSWELSMYELNRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKK----TMT 59
T + T + ++++ P + + +S S S C ICL+ +K+ +
Sbjct: 29 TPLNSTERLSDVALLSPLNWPMTPTPSSHGLKLSRNSSKSSKTCSICLNKMKEGGGHALF 88
Query: 60 TKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFDL--LISKIY 110
T EC H F CI + ++ GN+ CP CR K K P+FDL L ++ Y
Sbjct: 89 TAECSHSFHFHCIASNVKHGNQVCPVCRAKW--KEIPMQHPSFDLPYLFARSY 139
>MGI|MGI:2135752 [details] [associations]
symbol:Dtx3 "deltex 3 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IDA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2135752 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0007219 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
EMBL:AB015425 EMBL:BC099687 EMBL:BC138304 EMBL:BC157899
IPI:IPI00330413 RefSeq:NP_109639.1 UniGene:Mm.271724
ProteinModelPortal:Q80V91 SMR:Q80V91 STRING:Q80V91
PhosphoSite:Q80V91 PaxDb:Q80V91 PRIDE:Q80V91
Ensembl:ENSMUST00000038217 GeneID:80904 KEGG:mmu:80904
UCSC:uc007hil.1 ChiTaRS:DTX3 NextBio:350250 Bgee:Q80V91
CleanEx:MM_DTX3 Genevestigator:Q80V91 GermOnline:ENSMUSG00000040415
Uniprot:Q80V91
Length = 347
Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E CPICL ++ T ++C H FC CI AL+ K CP C + + N
Sbjct: 161 ETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGR-FYGQLVGNQPQNGR 218
Query: 104 LLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
+L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 219 MLVSKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCP 273
Query: 160 QGNE 163
+GN+
Sbjct: 274 EGNK 277
>UNIPROTKB|F1LY78 [details] [associations]
symbol:Dtx3 "Protein Dtx3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
IPI:IPI00991273 ProteinModelPortal:F1LY78
Ensembl:ENSRNOT00000006815 ArrayExpress:F1LY78 Uniprot:F1LY78
Length = 347
Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 44 ELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRADPNFD 103
E CPICL ++ T ++C H FC CI AL+ K CP C + + N
Sbjct: 161 ETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGR-FYGQLVGNQPQNGR 218
Query: 104 LLISK----IYPSRDEYEAHQVRVLEKLNKSHSQAALVQSINEGIKLQSQHRLQRTKKNI 159
+L+SK + PS YE + V++ + Q A + N G++ R+
Sbjct: 219 MLVSKDATLLLPS---YEKYGTIVIQYVFPPGVQGA--EHPNPGVRYPGTTRVAYLPDCP 273
Query: 160 QGNE 163
+GN+
Sbjct: 274 EGNK 277
>UNIPROTKB|F1NH39 [details] [associations]
symbol:F1NH39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101808
EMBL:AADN02045138 EMBL:AADN02058957 EMBL:AADN02058958
IPI:IPI00575345 Ensembl:ENSGALT00000019575 OMA:IVAECKE
Uniprot:F1NH39
Length = 406
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 39 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSKRSL 96
RSL EL CP+CL+ + EC H FC C+ + CP CR+ V +R
Sbjct: 7 RSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREP-VPQRLF 65
Query: 97 RADPNFDL 104
R PN L
Sbjct: 66 R--PNRSL 71
>UNIPROTKB|Q865W2 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 EMBL:AY081951 RefSeq:NP_999351.1
UniGene:Ssc.17223 ProteinModelPortal:Q865W2
Ensembl:ENSSSCT00000008446 GeneID:397383 KEGG:ssc:397383
ArrayExpress:Q865W2 Uniprot:Q865W2
Length = 486
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00093
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 36 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKE--CPTCRKKLVSK 93
VS L L CP+CL++ K+ + +C H +C C+++ R + E CP CR+++ S
Sbjct: 5 VSVPELEDRLQCPVCLEVFKEPLML-QCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSS 63
Query: 94 RSLRADPNFDL 104
S PN L
Sbjct: 64 SS---PPNVSL 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 321 274 0.00078 115 3 11 23 0.40 34
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 244
No. of states in DFA: 605 (64 KB)
Total size of DFA: 215 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.26u 0.13s 23.39t Elapsed: 00:00:02
Total cpu time: 23.30u 0.13s 23.43t Elapsed: 00:00:03
Start: Thu Aug 15 15:10:11 2013 End: Thu Aug 15 15:10:14 2013
WARNINGS ISSUED: 1