Query psy1702
Match_columns 200
No_of_seqs 169 out of 1109
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 19:44:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g3e_A D-amino-acid oxidase; F 99.9 1.4E-26 4.9E-31 193.9 12.3 192 5-198 105-338 (351)
2 1c0p_A D-amino acid oxidase; a 99.9 2.9E-23 1E-27 174.5 16.5 189 6-195 109-359 (363)
3 3nyc_A D-arginine dehydrogenas 99.8 8.2E-21 2.8E-25 159.5 11.3 164 27-193 162-358 (381)
4 3pvc_A TRNA 5-methylaminomethy 99.8 2.5E-20 8.7E-25 169.3 14.1 163 27-192 420-648 (689)
5 3ps9_A TRNA 5-methylaminomethy 99.8 2.3E-20 7.9E-25 169.2 13.6 163 27-192 425-644 (676)
6 3dme_A Conserved exported prot 99.8 4.7E-21 1.6E-25 159.9 7.1 165 27-192 158-369 (369)
7 1y56_B Sarcosine oxidase; dehy 99.8 1.7E-20 5.7E-25 158.2 10.0 165 27-193 157-355 (382)
8 3axb_A Putative oxidoreductase 99.8 4.5E-20 1.5E-24 159.2 10.9 164 27-193 189-418 (448)
9 2gf3_A MSOX, monomeric sarcosi 99.8 5.6E-20 1.9E-24 155.1 9.9 165 27-193 158-364 (389)
10 1ryi_A Glycine oxidase; flavop 99.8 1.3E-19 4.4E-24 152.6 10.2 165 27-193 172-362 (382)
11 2uzz_A N-methyl-L-tryptophan o 99.8 1.5E-19 5.3E-24 151.6 8.8 164 27-193 157-357 (372)
12 2gag_B Heterotetrameric sarcos 99.8 1E-18 3.5E-23 148.0 10.4 165 27-193 182-375 (405)
13 3c4n_A Uncharacterized protein 99.8 2.2E-18 7.5E-23 147.2 10.7 162 27-193 180-397 (405)
14 2oln_A NIKD protein; flavoprot 99.7 1.2E-17 4.2E-22 141.6 12.8 165 27-193 161-374 (397)
15 2qcu_A Aerobic glycerol-3-phos 99.7 9E-18 3.1E-22 147.3 12.3 167 27-194 157-373 (501)
16 2rgh_A Alpha-glycerophosphate 99.7 5.4E-17 1.8E-21 144.6 14.7 166 27-194 196-412 (571)
17 3da1_A Glycerol-3-phosphate de 99.7 4.7E-17 1.6E-21 144.8 12.8 167 27-195 178-393 (561)
18 1pj5_A N,N-dimethylglycine oxi 99.7 2.3E-17 7.9E-22 152.6 9.8 165 27-193 159-379 (830)
19 3dje_A Fructosyl amine: oxygen 99.7 1.8E-16 6.3E-21 136.0 13.3 167 27-193 169-384 (438)
20 3cgv_A Geranylgeranyl reductas 97.4 0.00036 1.2E-08 58.0 7.6 128 27-158 110-269 (397)
21 2weu_A Tryptophan 5-halogenase 97.0 0.0044 1.5E-07 53.7 10.4 159 27-191 181-373 (511)
22 3nix_A Flavoprotein/dehydrogen 96.6 0.0013 4.4E-08 55.3 4.0 165 27-194 114-326 (421)
23 2e4g_A Tryptophan halogenase; 95.9 0.038 1.3E-06 48.5 9.3 159 27-191 202-396 (550)
24 3oz2_A Digeranylgeranylglycero 95.7 0.04 1.4E-06 45.1 8.2 163 27-193 110-314 (397)
25 3i3l_A Alkylhalidase CMLS; fla 95.3 0.022 7.5E-07 50.7 5.6 165 27-193 136-345 (591)
26 2aqj_A Tryptophan halogenase, 94.5 0.25 8.5E-06 43.0 10.1 39 27-65 173-225 (538)
27 3atr_A Conserved archaeal prot 94.4 0.48 1.6E-05 40.1 11.4 162 27-193 108-319 (453)
28 3fmw_A Oxygenase; mithramycin, 88.4 2.8 9.7E-05 36.8 9.7 37 27-63 156-208 (570)
29 3nks_A Protoporphyrinogen oxid 87.4 0.43 1.5E-05 40.3 3.7 37 27-63 242-291 (477)
30 2gmh_A Electron transfer flavo 81.4 20 0.00067 31.4 11.8 14 50-63 205-218 (584)
31 2cul_A Glucose-inhibited divis 79.0 1.5 5E-05 33.5 3.3 39 27-65 76-128 (232)
32 2bcg_G Secretory pathway GDP d 77.8 1.1 3.7E-05 38.0 2.4 39 27-65 250-303 (453)
33 3v76_A Flavoprotein; structura 77.5 1.1 3.6E-05 37.9 2.2 36 27-62 140-187 (417)
34 2qa2_A CABE, polyketide oxygen 76.3 20 0.00069 30.6 10.1 84 27-111 115-223 (499)
35 2qa1_A PGAE, polyketide oxygen 75.7 14 0.00047 31.7 8.9 84 27-111 114-222 (500)
36 2ywl_A Thioredoxin reductase r 74.2 2.3 7.7E-05 30.7 3.0 38 26-63 63-111 (180)
37 3ka7_A Oxidoreductase; structu 71.2 1.4 4.7E-05 36.5 1.3 41 27-67 204-258 (425)
38 2i0z_A NAD(FAD)-utilizing dehy 70.8 2.2 7.5E-05 36.0 2.5 36 27-62 142-191 (447)
39 3i6d_A Protoporphyrinogen oxid 70.1 28 0.00095 28.7 9.3 71 123-193 380-467 (470)
40 3rp8_A Flavoprotein monooxygen 67.5 29 0.00098 28.3 8.7 84 27-114 135-245 (407)
41 2gqf_A Hypothetical protein HI 67.0 2.7 9.3E-05 35.1 2.3 37 27-63 117-169 (401)
42 3ihm_A Styrene monooxygenase A 66.4 4.1 0.00014 34.1 3.3 37 27-63 130-168 (430)
43 1d5t_A Guanine nucleotide diss 65.9 1.8 6.1E-05 36.5 1.0 39 27-65 242-293 (433)
44 3nlc_A Uncharacterized protein 65.9 2.9 0.0001 36.7 2.4 37 27-63 228-278 (549)
45 4dgk_A Phytoene dehydrogenase; 64.2 3.2 0.00011 35.2 2.2 37 27-63 229-279 (501)
46 3nrn_A Uncharacterized protein 62.7 2.1 7.3E-05 35.5 0.9 37 27-63 197-244 (421)
47 4a9w_A Monooxygenase; baeyer-v 62.3 4 0.00014 32.4 2.4 54 27-80 84-151 (357)
48 3c4a_A Probable tryptophan hyd 62.1 4.3 0.00015 33.2 2.6 37 27-63 106-144 (381)
49 4at0_A 3-ketosteroid-delta4-5a 61.5 4.8 0.00017 34.5 2.9 38 26-63 209-265 (510)
50 2pyx_A Tryptophan halogenase; 60.9 5.2 0.00018 34.4 3.0 39 27-65 183-236 (526)
51 2v3a_A Rubredoxin reductase; a 60.1 3.3 0.00011 34.0 1.6 55 27-83 195-263 (384)
52 3hyw_A Sulfide-quinone reducta 57.9 3.7 0.00013 34.4 1.5 35 27-61 64-108 (430)
53 1y0p_A Fumarate reductase flav 56.3 8.4 0.00029 33.5 3.6 37 27-63 263-318 (571)
54 3fg2_P Putative rubredoxin red 56.0 4.4 0.00015 33.5 1.7 55 27-83 192-261 (404)
55 1qo8_A Flavocytochrome C3 fuma 52.0 7.5 0.00026 33.8 2.5 37 27-63 258-313 (566)
56 3e1t_A Halogenase; flavoprotei 51.8 6.8 0.00023 33.6 2.2 86 27-114 119-237 (512)
57 3f8d_A Thioredoxin reductase ( 51.7 5.4 0.00019 31.1 1.5 52 12-63 62-126 (323)
58 1d4d_A Flavocytochrome C fumar 51.6 11 0.00037 33.0 3.5 37 27-63 263-318 (572)
59 3vrd_B FCCB subunit, flavocyto 51.5 8.1 0.00028 31.6 2.6 36 27-62 63-108 (401)
60 3ces_A MNMG, tRNA uridine 5-ca 51.1 7.8 0.00027 34.8 2.5 37 27-63 132-182 (651)
61 1y56_A Hypothetical protein PH 50.5 5.4 0.00019 34.1 1.4 55 27-82 265-337 (493)
62 3d1c_A Flavin-containing putat 49.1 8.5 0.00029 30.8 2.3 37 27-63 96-144 (369)
63 3lov_A Protoporphyrinogen oxid 49.1 63 0.0022 26.8 7.9 157 34-194 249-465 (475)
64 3ihg_A RDME; flavoenzyme, anth 49.1 7.6 0.00026 33.4 2.1 37 27-63 128-184 (535)
65 3cty_A Thioredoxin reductase; 48.3 7.2 0.00025 30.7 1.7 52 12-63 64-127 (319)
66 2zxi_A TRNA uridine 5-carboxym 48.3 12 0.0004 33.6 3.2 37 27-63 131-181 (637)
67 3lxd_A FAD-dependent pyridine 48.3 11 0.00039 31.0 3.0 38 27-64 202-253 (415)
68 1w4x_A Phenylacetone monooxyge 48.2 7.9 0.00027 33.5 2.1 33 50-82 142-175 (542)
69 3h8l_A NADH oxidase; membrane 47.8 3.5 0.00012 34.1 -0.2 52 27-78 226-288 (409)
70 2wdq_A Succinate dehydrogenase 47.4 14 0.00048 32.4 3.6 39 27-65 151-209 (588)
71 3sx6_A Sulfide-quinone reducta 47.1 9.6 0.00033 31.8 2.4 37 27-63 67-113 (437)
72 3alj_A 2-methyl-3-hydroxypyrid 47.1 11 0.00039 30.5 2.8 37 27-63 115-161 (379)
73 1vdc_A NTR, NADPH dependent th 46.8 7.2 0.00025 30.8 1.5 38 27-64 78-126 (333)
74 3cp8_A TRNA uridine 5-carboxym 46.7 9.8 0.00033 34.1 2.4 38 27-64 125-176 (641)
75 3fbs_A Oxidoreductase; structu 45.2 16 0.00054 28.0 3.3 52 12-63 48-113 (297)
76 2bs2_A Quinol-fumarate reducta 44.2 16 0.00053 32.7 3.4 39 27-65 166-223 (660)
77 1rp0_A ARA6, thiazole biosynth 43.3 7.1 0.00024 30.6 0.9 52 27-78 127-217 (284)
78 2h88_A Succinate dehydrogenase 41.5 15 0.00053 32.5 2.9 39 27-65 163-220 (621)
79 3uox_A Otemo; baeyer-villiger 41.3 8.8 0.0003 33.4 1.3 53 27-79 346-409 (545)
80 1zk7_A HGII, reductase, mercur 40.2 9.1 0.00031 32.2 1.2 37 27-63 224-272 (467)
81 2e5v_A L-aspartate oxidase; ar 39.9 20 0.00069 30.3 3.3 38 27-65 127-179 (472)
82 3klj_A NAD(FAD)-dependent dehy 38.8 18 0.00061 29.8 2.7 35 26-60 69-114 (385)
83 3p1w_A Rabgdi protein; GDI RAB 38.7 8.8 0.0003 33.0 0.8 35 27-61 264-313 (475)
84 3iwa_A FAD-dependent pyridine 38.1 14 0.00049 31.1 2.0 37 27-63 210-259 (472)
85 1xdi_A RV3303C-LPDA; reductase 38.0 11 0.00037 32.2 1.3 38 27-64 231-281 (499)
86 3gwf_A Cyclohexanone monooxyge 37.7 5.9 0.0002 34.5 -0.4 52 28-79 339-402 (540)
87 2q0l_A TRXR, thioredoxin reduc 36.6 9.3 0.00032 29.8 0.6 38 26-63 66-115 (311)
88 1kf6_A Fumarate reductase flav 35.9 24 0.00081 31.1 3.2 39 27-65 142-200 (602)
89 2q7v_A Thioredoxin reductase; 34.9 17 0.00057 28.6 1.9 38 26-63 72-124 (325)
90 2bry_A NEDD9 interacting prote 34.9 32 0.0011 29.3 3.8 37 27-63 174-231 (497)
91 4ap3_A Steroid monooxygenase; 34.9 5.9 0.0002 34.5 -0.9 52 27-78 351-413 (549)
92 1k0i_A P-hydroxybenzoate hydro 33.6 28 0.00096 28.1 3.1 37 27-63 111-164 (394)
93 3gwf_A Cyclohexanone monooxyge 33.5 30 0.001 29.9 3.4 55 27-81 95-167 (540)
94 2x3n_A Probable FAD-dependent 32.9 16 0.00054 29.8 1.4 84 27-111 115-226 (399)
95 3ef6_A Toluene 1,2-dioxygenase 32.8 17 0.00059 29.9 1.7 40 27-66 193-246 (410)
96 2yqu_A 2-oxoglutarate dehydrog 32.4 15 0.0005 30.8 1.2 38 27-64 216-266 (455)
97 3lzw_A Ferredoxin--NADP reduct 32.1 32 0.0011 26.7 3.1 52 27-78 197-267 (332)
98 3klj_A NAD(FAD)-dependent dehy 31.3 24 0.00081 29.0 2.3 53 27-82 196-250 (385)
99 3k30_A Histamine dehydrogenase 31.2 33 0.0011 30.6 3.3 37 27-63 575-625 (690)
100 3itj_A Thioredoxin reductase 1 29.7 17 0.0006 28.4 1.2 37 27-63 92-143 (338)
101 1w4x_A Phenylacetone monooxyge 28.9 8.7 0.0003 33.2 -0.8 53 27-79 346-409 (542)
102 3o0h_A Glutathione reductase; 28.7 23 0.00078 29.9 1.8 37 27-63 240-289 (484)
103 1trb_A Thioredoxin reductase; 27.3 35 0.0012 26.4 2.6 37 27-63 192-248 (320)
104 2vvm_A Monoamine oxidase N; FA 27.0 20 0.00067 30.2 1.1 37 27-63 263-313 (495)
105 3ab1_A Ferredoxin--NADP reduct 26.4 65 0.0022 25.5 4.1 52 27-78 210-280 (360)
106 2zbw_A Thioredoxin reductase; 26.0 40 0.0014 26.4 2.7 52 27-78 199-269 (335)
107 3oc4_A Oxidoreductase, pyridin 25.7 39 0.0013 28.1 2.7 37 27-63 197-245 (452)
108 1fec_A Trypanothione reductase 25.2 32 0.0011 29.1 2.1 38 27-64 239-290 (490)
109 3ics_A Coenzyme A-disulfide re 24.9 41 0.0014 29.1 2.8 37 27-63 236-283 (588)
110 4a5l_A Thioredoxin reductase; 24.8 31 0.0011 26.6 1.8 38 26-63 73-122 (314)
111 1mo9_A ORF3; nucleotide bindin 24.5 29 0.00099 29.7 1.7 38 27-64 263-318 (523)
112 3r9u_A Thioredoxin reductase; 24.5 49 0.0017 25.4 2.9 51 11-61 52-117 (315)
113 3h28_A Sulfide-quinone reducta 24.0 28 0.00097 28.8 1.5 35 27-61 64-108 (430)
114 2cdu_A NADPH oxidase; flavoenz 23.5 46 0.0016 27.7 2.7 37 27-63 199-248 (452)
115 1uqr_A 3-dehydroquinate dehydr 23.3 49 0.0017 23.8 2.4 51 12-63 10-80 (154)
116 4g6h_A Rotenone-insensitive NA 23.1 49 0.0017 28.3 2.8 38 27-64 280-334 (502)
117 1fl2_A Alkyl hydroperoxide red 22.9 24 0.00081 27.4 0.7 37 27-63 64-116 (310)
118 2wpf_A Trypanothione reductase 22.8 52 0.0018 27.9 2.9 37 27-63 243-293 (495)
119 1gqo_A Dehydroquinase; dehydra 22.7 44 0.0015 23.8 2.0 51 12-63 9-79 (143)
120 1v59_A Dihydrolipoamide dehydr 22.4 35 0.0012 28.6 1.8 38 27-64 232-289 (478)
121 2gqw_A Ferredoxin reductase; f 22.1 57 0.002 26.7 3.0 40 27-66 195-244 (408)
122 3cgb_A Pyridine nucleotide-dis 22.1 50 0.0017 27.8 2.7 41 27-67 235-288 (480)
123 3lwz_A 3-dehydroquinate dehydr 22.0 54 0.0019 23.6 2.4 51 12-63 16-86 (153)
124 1m6i_A Programmed cell death p 21.5 40 0.0014 28.6 2.0 53 27-79 234-302 (493)
125 1q1r_A Putidaredoxin reductase 20.5 55 0.0019 27.1 2.6 36 27-62 68-114 (431)
126 1xhc_A NADH oxidase /nitrite r 20.3 48 0.0016 26.8 2.2 36 26-61 67-112 (367)
127 1nhp_A NADH peroxidase; oxidor 20.2 63 0.0021 26.8 2.9 37 27-63 199-247 (447)
No 1
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.94 E-value=1.4e-26 Score=193.90 Aligned_cols=192 Identities=25% Similarity=0.344 Sum_probs=155.3
Q ss_pred CCCccccCCceecChhhhh---Hh------------H--------HHHHHcCcEEEEEeccccccccC-CCCEEEEcCCC
Q psy1702 5 HYLKPVLPVYKRMSEEELA---VY------------T--------VLFKTAGGKVIEKYISSFSELGS-EYNTIFNCTGL 60 (200)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~---~~------------~--------~~~~~~Gv~~~~~~V~~l~~~~g-~ad~VV~AaG~ 60 (200)
.||++...+++.++.+|+. .+ | ++|+++|+++++.+|++++...+ .||.||+|+|+
T Consensus 105 ~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~~~~~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~~~~a~~VV~A~G~ 184 (351)
T 3g3e_A 105 PSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNCTGV 184 (351)
T ss_dssp CGGGGTSEEEEECCHHHHTTCTTCCEEEEEEEEEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHHHHTTCSEEEECCGG
T ss_pred cCHHHhCCCceECCHHHhccCCCCceEEEecceEEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHhhcCCCCEEEECCCc
Confidence 4677777789999999872 11 2 78888999998877888875443 79999999999
Q ss_pred CcccccCCCCceeecceEEEEeCCCcceEEe-c------CCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHH
Q psy1702 61 GARTLCNDMHVIPVRGQTIRIKAPHITNFYK-N------EYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILAR 133 (200)
Q Consensus 61 ~s~~L~~~~pl~p~rGq~~~~~~~~~~~~i~-~------~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~ 133 (200)
|+..|+.++|+.|.|||++.++++.+.+.++ . +...|++|. .++ +++|++.+..+++..++.+..+.+++.
T Consensus 185 ~s~~l~~~~~l~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~-~~~-~~iGg~~~~~~~~~~~~~~~~~~l~~~ 262 (351)
T 3g3e_A 185 WAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPG-TQT-VTLGGIFQLGNWSELNNIQDHNTIWEG 262 (351)
T ss_dssp GGGGTSCCTTCEEEEEEEEEEECTTCCSEEEECCTTTCTTCSCEEEEC-SSC-EEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred ChHhhcCCCceeecCCcEEEEeCCCcceEEEeccccCCCCceeEEEeC-CCc-EEEeeeeecCCCCCCCCHHHHHHHHHH
Confidence 9999988899999999999998765554443 1 235899999 774 999999988788888899999999999
Q ss_pred HHhhCCCCCCCCCcceeEeecCCCCC-ce----eeeEEe------CCCeeccceeecHHHHHHHHHHHHHHhhhcc
Q psy1702 134 TEELLPGVGACGGGQCWVGLRPHRYR-VR----VECEQT------PGGKVNAGVGVVVGRKKRLTDLLLTFNAENK 198 (200)
Q Consensus 134 ~~~~~P~l~~~~v~~~w~G~Rp~tpD-~~----i~~~~~------~~g~~~~G~~~a~~~A~~~a~li~~~~~~~~ 198 (200)
+.+++|.+.+.++.+.|+|+||+||| |. ++..+. ..|+...|+++++++|+.++++|.+...+.|
T Consensus 263 ~~~~~P~l~~~~i~~~w~G~r~~t~D~p~~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~~~~ 338 (351)
T 3g3e_A 263 CCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKK 338 (351)
T ss_dssp HHHHCGGGGGCEEEEEEEEEEEECSSCEEEEEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCccCCcEeeeeEeeCCCCCCccceeeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHHhcc
Confidence 99999999889999999999999999 43 332211 1344446888999999999999999876643
No 2
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.91 E-value=2.9e-23 Score=174.45 Aligned_cols=189 Identities=24% Similarity=0.307 Sum_probs=148.3
Q ss_pred CCccccCCceecChhhhhHh------------H--------HHHHHcCcEEEEEeccccccccCCCCEEEEcCCCCcccc
Q psy1702 6 YLKPVLPVYKRMSEEELAVY------------T--------VLFKTAGGKVIEKYISSFSELGSEYNTIFNCTGLGARTL 65 (200)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~------------~--------~~~~~~Gv~~~~~~V~~l~~~~g~ad~VV~AaG~~s~~L 65 (200)
|+++.-..|+.++.+|+|.+ | ++++++|+++++.+|++++.....||.||+|+|.|+..|
T Consensus 109 ~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~~~v~~l~~~~~~a~~VV~A~G~~s~~l 188 (363)
T 1c0p_A 109 WYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGAKSI 188 (363)
T ss_dssp TTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEECCCSBGGGTCSSCSEEEECCGGGGGTS
T ss_pred HHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEEEEcccHhhcCcCCCEEEECCCcchhhc
Confidence 55555567899998887621 2 888899999998778887643117999999999999998
Q ss_pred cC--CCCceeecceEEEEeCCC-cceEEe--cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCC
Q psy1702 66 CN--DMHVIPVRGQTIRIKAPH-ITNFYK--NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPG 140 (200)
Q Consensus 66 ~~--~~pl~p~rGq~~~~~~~~-~~~~i~--~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~ 140 (200)
+. ++|+.|.|||++.++++. +..+.. +....|++|+ .++++++|++.+..+++..++.+..+.+++.+.+++|.
T Consensus 189 ~~~~~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~y~~p~-~~g~~~iG~t~~~~~~~~~~~~~~~~~l~~~~~~~~P~ 267 (363)
T 1c0p_A 189 AGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPASPAYIIPR-PGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPT 267 (363)
T ss_dssp BTTCCTTEEEEEEEEEEEECCCCCCEEECSCTTCCEEEEEE-TTTEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGG
T ss_pred cCcccCCccccCCeEEEEeCCcccceEeeccCCCcEEEEEc-CCCEEEEEeeeccCCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 75 789999999999998753 222222 2233899999 78889999999887788888999999999999999999
Q ss_pred C------CCCCCcceeEeecCCCCC--ceeeeE-E----------------------------eCCCeeccceeecHHHH
Q psy1702 141 V------GACGGGQCWVGLRPHRYR--VRVECE-Q----------------------------TPGGKVNAGVGVVVGRK 183 (200)
Q Consensus 141 l------~~~~v~~~w~G~Rp~tpD--~~i~~~-~----------------------------~~~g~~~~G~~~a~~~A 183 (200)
+ .+.++.+.|+|+||+|+| |.++.. . ...|+..+|+++++++|
T Consensus 268 l~~~~~~~~~~i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g 347 (363)
T 1c0p_A 268 ISSDGTIEGIEVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAA 347 (363)
T ss_dssp GSSSSSGGGCEEEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCcccccceEeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHH
Confidence 8 457899999999999999 665542 1 01233346888888999
Q ss_pred HHHHHHHHHHhh
Q psy1702 184 KRLTDLLLTFNA 195 (200)
Q Consensus 184 ~~~a~li~~~~~ 195 (200)
+.++++|.+...
T Consensus 348 ~~~a~li~~~l~ 359 (363)
T 1c0p_A 348 EDVAQLVDEAFQ 359 (363)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988653
No 3
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.84 E-value=8.2e-21 Score=159.45 Aligned_cols=164 Identities=12% Similarity=0.131 Sum_probs=126.2
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C--CCCEEEEcCCCCcccccC----C-CCceeecceEEEEeCCC---c
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S--EYNTIFNCTGLGARTLCN----D-MHVIPVRGQTIRIKAPH---I 86 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g--~ad~VV~AaG~~s~~L~~----~-~pl~p~rGq~~~~~~~~---~ 86 (200)
++++++|++++. .+|++|+... + .||.||+|+|.|+..|+. . +|+.|.|||++.++.+. .
T Consensus 162 ~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~rg~~~~~~~~~~~~~ 241 (381)
T 3nyc_A 162 RGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDC 241 (381)
T ss_dssp HHHHHTTCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGGGHHHHHHHHTCCCCCCEEEEEEEEEECCCTTCCC
T ss_pred HHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCChhHHHHHHHhCCCCCceeeeEEEEEEECCCcCCCc
Confidence 778889999997 5788876431 2 799999999999988752 2 69999999999887642 1
Q ss_pred c--eEEe-cCCeEEEEeCCCCCeEEEccceec--CCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCCCCC--
Q psy1702 87 T--NFYK-NEYDTYIIPNGFDSLVTLGGTQNF--GHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPHRYR-- 159 (200)
Q Consensus 87 ~--~~i~-~~~~~y~~p~~~~g~~~iG~t~~~--~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~tpD-- 159 (200)
. +.+. .+...|++|. . +++++|++.+. ...+..++.+..+.+++.+.+ +|.+...++.+.|+|+||+|+|
T Consensus 242 ~~~p~~~~~~~~~y~~p~-~-g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~w~G~r~~t~D~~ 318 (381)
T 3nyc_A 242 HDWPMLVSLDESFYLKPD-A-GMLLGSPANADPVEAHDVQPEQLDIATGMYLIEE-ATTLTIRRPEHTWAGLRSFVADGD 318 (381)
T ss_dssp TTCCEEEETTSSCEEEEE-T-TEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHH-HBSCCCCCCSEEEEEEEEECTTSC
T ss_pred CccceEEeCCCCEEEEeC-C-CcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHh-cCCCcccceeeeeEEccccCCCCC
Confidence 2 1333 3345899999 6 67999998764 234556677778888888866 5778778899999999999999
Q ss_pred ceeeeEEeCCCee------ccceeecHHHHHHHHHHHHHH
Q psy1702 160 VRVECEQTPGGKV------NAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 160 ~~i~~~~~~~g~~------~~G~~~a~~~A~~~a~li~~~ 193 (200)
|.|+..+..+|++ .+|+++++++|+.++++|.+.
T Consensus 319 p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~ 358 (381)
T 3nyc_A 319 LVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQ 358 (381)
T ss_dssp CEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHTTC
T ss_pred ceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHhCC
Confidence 8888754334543 378889999999999999764
No 4
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.83 E-value=2.5e-20 Score=169.30 Aligned_cols=163 Identities=16% Similarity=0.142 Sum_probs=131.7
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC----CCCEEEEcCCCCcccccC--CCCceeecceEEEEeCCC----c
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS----EYNTIFNCTGLGARTLCN--DMHVIPVRGQTIRIKAPH----I 86 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g----~ad~VV~AaG~~s~~L~~--~~pl~p~rGq~~~~~~~~----~ 86 (200)
+++++.|++++. .+|++|... .+ .||.||+|+|.|+..|.. .+|++|+|||++.++.+. +
T Consensus 420 ~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rGq~~~~~~~~~~~~l 499 (689)
T 3pvc_A 420 MLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPLSAVRGQVSHIPTTPVLSQL 499 (689)
T ss_dssp HHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSCCEEEEEEEEEEECCTTGGGC
T ss_pred HHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCCccccccCcEEEECCCCccccC
Confidence 777889999988 478776532 11 589999999999998864 579999999999998642 3
Q ss_pred ceEEecCCeEEEEeCCC--CCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCC-----CCCCcceeEeecCCCCC
Q psy1702 87 TNFYKNEYDTYIIPNGF--DSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVG-----ACGGGQCWVGLRPHRYR 159 (200)
Q Consensus 87 ~~~i~~~~~~y~~p~~~--~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~-----~~~v~~~w~G~Rp~tpD 159 (200)
+.++..+ .|++|. . ++++++|++++.++.+..++.+..+.+++++.+++|.+. +.++.+.|+|+||+|+|
T Consensus 500 ~~v~~~~--~Yl~P~-~~~~g~~~iGat~~~~~~d~~~~~~~~~~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~~t~D 576 (689)
T 3pvc_A 500 QQVLCYD--GYLTPV-NPANQHHCIGASYQRGDIATDFRLTEQQENRERLLRCLPQVSWPQQVDVSDNQARCGVRCAIRD 576 (689)
T ss_dssp CSEEESS--SEECCC-BTTTTEEEEECCCEETBCCCCCCHHHHHHHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEEECTT
T ss_pred CeeEeCC--ceEccc-cCCCCeEEEEEeccCCCCCCCCCHHHHHHHHHHHHHhCCCccccccccccccceeEEEeeecCC
Confidence 3344443 699998 7 788999999998888888899999999999999999986 45678999999999999
Q ss_pred --ceeeeEEe-------------------------------CCCeec------cceeecHHHHHHHHHHHHH
Q psy1702 160 --VRVECEQT-------------------------------PGGKVN------AGVGVVVGRKKRLTDLLLT 192 (200)
Q Consensus 160 --~~i~~~~~-------------------------------~~g~~~------~G~~~a~~~A~~~a~li~~ 192 (200)
|.||..+. .+|+++ .|+++++++|+.++++|.+
T Consensus 577 ~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~g 648 (689)
T 3pvc_A 577 HLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVWPELFMVGGLGSRGLCSAPLVAEILAAQMFG 648 (689)
T ss_dssp SCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCCCChHHhhcccccHHHHHHHHHHHHHHHHcC
Confidence 88887542 234443 5788888899999999965
No 5
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.83 E-value=2.3e-20 Score=169.19 Aligned_cols=163 Identities=14% Similarity=0.164 Sum_probs=132.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCcccccC--CCCceeecceEEEEeCC-C---cc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGARTLCN--DMHVIPVRGQTIRIKAP-H---IT 87 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~~L~~--~~pl~p~rGq~~~~~~~-~---~~ 87 (200)
+++++.|++++. .+|++|... .+ .||.||+|+|.|+..|.. .+|++|+|||++.++.+ . ++
T Consensus 425 ~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rGq~~~~~~~~~~~~l~ 504 (676)
T 3ps9_A 425 ELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELK 504 (676)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTCSCEEEEEEEEEEECCTTGGGCC
T ss_pred HHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCCcceeecCEEEEECCCcccccCC
Confidence 777889999998 478777532 12 789999999999998864 68999999999999763 2 33
Q ss_pred eEEecCCeEEEEeCCC--CCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCC-----CCCCcceeEeecCCCCC-
Q psy1702 88 NFYKNEYDTYIIPNGF--DSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVG-----ACGGGQCWVGLRPHRYR- 159 (200)
Q Consensus 88 ~~i~~~~~~y~~p~~~--~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~-----~~~v~~~w~G~Rp~tpD- 159 (200)
.+++.+ .|++|. . ++++++|++++.++.+..++.+..+++++++.+++|.+. +.++.+.|+|+||+|+|
T Consensus 505 ~~l~~~--~Yl~P~-~~~~g~~~iG~t~~~~~~d~~~~~~~~~~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~t~D~ 581 (676)
T 3ps9_A 505 QVLCYD--GYLTPQ-NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDH 581 (676)
T ss_dssp SEEESS--SEECCC-BTTTTEEEEECCCEETCCCCCCCHHHHHHHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEEECTTC
T ss_pred ceeECC--eeeccc-cCCCCeEEEeeccCCCCCCCCCCHHHHHHHHHHHHHhCCCccccccCcccccceEEEEeCccCCc
Confidence 444444 699998 6 688999999998888888999999999999999999875 35678999999999999
Q ss_pred -ceeeeEEe-----------------------CCCee------ccceeecHHHHHHHHHHHHH
Q psy1702 160 -VRVECEQT-----------------------PGGKV------NAGVGVVVGRKKRLTDLLLT 192 (200)
Q Consensus 160 -~~i~~~~~-----------------------~~g~~------~~G~~~a~~~A~~~a~li~~ 192 (200)
|.||..+. .+|++ ..|+++++++|+.++++|.+
T Consensus 582 lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~i~g 644 (676)
T 3ps9_A 582 LPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSD 644 (676)
T ss_dssp CCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeeecccccHHHHHHHHHHHHHHHHcC
Confidence 88887542 23443 36788888899999999975
No 6
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.83 E-value=4.7e-21 Score=159.94 Aligned_cols=165 Identities=11% Similarity=0.152 Sum_probs=125.9
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC-----CCCEEEEcCCCCcccccC---------CCCceeecceEEEE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS-----EYNTIFNCTGLGARTLCN---------DMHVIPVRGQTIRI 81 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g-----~ad~VV~AaG~~s~~L~~---------~~pl~p~rGq~~~~ 81 (200)
++++++|++++. .+|++++.. .+ .||.||+|+|.|+..|+. ..++.|.|||++.+
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~~ 237 (369)
T 3dme_A 158 GDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTL 237 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEEC
T ss_pred HHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEEE
Confidence 778889999996 477766532 11 689999999999988742 24799999999988
Q ss_pred eCC-CcceEEe-----cCCeEEEEeCCCCCeEEEccceec-CCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeec
Q psy1702 82 KAP-HITNFYK-----NEYDTYIIPNGFDSLVTLGGTQNF-GHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLR 154 (200)
Q Consensus 82 ~~~-~~~~~i~-----~~~~~y~~p~~~~g~~~iG~t~~~-~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~R 154 (200)
+.+ .+.+.++ .....++.+. .++++++|++.+. ++++..++.+..+.+++.+.+++|.+.+.++.+.|+|+|
T Consensus 238 ~~~~~~~~~~~~~p~~~~~~~~~~~~-~~g~~~iG~t~e~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~v~~~w~G~R 316 (369)
T 3dme_A 238 AGRAPFSRLIYPVPQHAGLGVHLTLD-LGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIR 316 (369)
T ss_dssp SSSCSCSSEEEECTTCSSCCCCEEEC-TTSCEEECCCCEEESSCCCCCCGGGGGGHHHHHHTTCTTCCTTCCEEEEEEEE
T ss_pred CCCCccCceeecCCCCCCceEEEeCc-cCCcEEECCCcccccccccccCHHHHHHHHHHHHHHCCCCChhhceecceecc
Confidence 764 2333322 1123566666 5677999999876 677888899999999999999999999999999999999
Q ss_pred CCC-----CC--cee-eeE-EeCCCee------ccceeecHHHHHHHHHHHHH
Q psy1702 155 PHR-----YR--VRV-ECE-QTPGGKV------NAGVGVVVGRKKRLTDLLLT 192 (200)
Q Consensus 155 p~t-----pD--~~i-~~~-~~~~g~~------~~G~~~a~~~A~~~a~li~~ 192 (200)
|++ +| |+| +.. +..+|++ ..|+++++++|+.++|+|.+
T Consensus 317 p~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i~~ 369 (369)
T 3dme_A 317 PKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLAA 369 (369)
T ss_dssp EESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHHHC-
T ss_pred ccccCCCCCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHHhhC
Confidence 997 44 777 542 2234543 46899999999999999853
No 7
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.83 E-value=1.7e-20 Score=158.22 Aligned_cols=165 Identities=12% Similarity=0.105 Sum_probs=130.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC--CCCEEEEcCCCCcccccC----C--CCceeecceEEEEeCC--C
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS--EYNTIFNCTGLGARTLCN----D--MHVIPVRGQTIRIKAP--H 85 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g--~ad~VV~AaG~~s~~L~~----~--~pl~p~rGq~~~~~~~--~ 85 (200)
++++++|++++. .+|++++.. .+ .||.||+|+|.|+..|.. . +|+.|.|||++.+++. .
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~ 236 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRG 236 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGGHHHHHHHHTCCSCCCCEEEEEEEEEECCCSTT
T ss_pred HHHHHCCCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchhHHHHHHHcCCCcCcCCCeeEeEEEEEccCCcc
Confidence 778889999998 467776532 12 799999999999987642 4 8999999999998763 2
Q ss_pred cc-eEEec-C-CeEEEEeCCCCCeEEEcc-c-eecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCCCCC-
Q psy1702 86 IT-NFYKN-E-YDTYIIPNGFDSLVTLGG-T-QNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPHRYR- 159 (200)
Q Consensus 86 ~~-~~i~~-~-~~~y~~p~~~~g~~~iG~-t-~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~tpD- 159 (200)
.. +++.+ + ...|++|. .++ +++|+ + .+..+++..++.+..+.+++.+.+++|.+.+.++.+.|+|+||+|+|
T Consensus 237 ~~~~~~~~~~~~~~y~~p~-~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~g~r~~t~d~ 314 (382)
T 1y56_B 237 TINPMVISFKYGHAYLTQT-FHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPALKNLLILRTWAGYYAKTPDS 314 (382)
T ss_dssp SSCSEEEESTTTTEEEECC-SSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEECTTS
T ss_pred cCCCeEEecCCCeEEEEEe-CCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcCCCCceEEEEeccccCCCC
Confidence 33 44443 2 35899999 888 99995 4 34455677788899999999999999999888999999999999999
Q ss_pred -ceeeeEEeCCCee------ccceeecHHHHHHHHHHHHHH
Q psy1702 160 -VRVECEQTPGGKV------NAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 160 -~~i~~~~~~~g~~------~~G~~~a~~~A~~~a~li~~~ 193 (200)
|.|+..+..+|.+ .+|+++++++|+.++++|.+.
T Consensus 315 ~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 315 NPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp CCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhCC
Confidence 7888765334543 367888889999999999864
No 8
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.82 E-value=4.5e-20 Score=159.17 Aligned_cols=164 Identities=15% Similarity=0.085 Sum_probs=129.5
Q ss_pred HHHHHcCcEEEE-Eecccccc---------------cc----------C----CCCEEEEcCCCCcccccC----CCCce
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE---------------LG----------S----EYNTIFNCTGLGARTLCN----DMHVI 72 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~---------------~~----------g----~ad~VV~AaG~~s~~L~~----~~pl~ 72 (200)
++++++|++++. .+|++|+. .. + .||.||+|+|.|+..|+. ++|+.
T Consensus 189 ~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~~l~~~~g~~~~~~ 268 (448)
T 3axb_A 189 RRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWSNRLLNPLGIDTFSR 268 (448)
T ss_dssp HHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECCGGGHHHHHGGGTCCCSEE
T ss_pred HHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECCCcCHHHHHHHcCCCCccc
Confidence 788889999998 57777653 11 1 479999999999987753 58999
Q ss_pred eecceEEEEeCCC--cc--------------eEEecCCeEEEEeCCCC-CeEEEccceec---CCCCC--CCChHH-HHH
Q psy1702 73 PVRGQTIRIKAPH--IT--------------NFYKNEYDTYIIPNGFD-SLVTLGGTQNF---GHVNR--CVESTD-TES 129 (200)
Q Consensus 73 p~rGq~~~~~~~~--~~--------------~~i~~~~~~y~~p~~~~-g~~~iG~t~~~---~~~~~--~~~~~~-~~~ 129 (200)
|.|||++.++++. +. +++.+....|++|. .+ |++++|++.+. .+++. .++.+. .+.
T Consensus 269 p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~y~~p~-~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (448)
T 3axb_A 269 PKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILPKRVLVRPA-PREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLA 347 (448)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEETTTEEEEEE-TTTTEEEEEECCCTTSCBCCCSSCCCCHHHHHHH
T ss_pred ccceEEEEeCCcccccccccccccccccCCCceEEcCCceEEeec-CCCCeEEEecCCcccCCcccccccCCChHHHHHH
Confidence 9999999998742 21 23333245899999 77 78999999863 34455 677888 899
Q ss_pred HHHHHHhhCCCCCCCCCcceeEeecCC-CCC--ceeeeEEeCCCee------ccceeecHHHHHHHHHHHHHH
Q psy1702 130 ILARTEELLPGVGACGGGQCWVGLRPH-RYR--VRVECEQTPGGKV------NAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 130 ll~~~~~~~P~l~~~~v~~~w~G~Rp~-tpD--~~i~~~~~~~g~~------~~G~~~a~~~A~~~a~li~~~ 193 (200)
+++.+.++||.+.+.++.+.|+|+||+ |+| |.|+..+ +|++ .+|+++++++|+.++++|.+.
T Consensus 348 l~~~~~~~~P~l~~~~~~~~w~G~r~~~t~d~~p~ig~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 418 (448)
T 3axb_A 348 ILPILSLYLPQFQDAYPSGGWAGHYDISFDANPVVFEPWE--SGIVVAAGTSGSGIMKSDSIGRVAAAVALGM 418 (448)
T ss_dssp THHHHHHHCGGGTTCCCSEEEEEEEEEETTSSCEEECGGG--CSEEEEECCTTCCGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCcCcccCCcccceEEEeccccCCCCcEeeecC--CCEEEEECCCchhHhHhHHHHHHHHHHHcCC
Confidence 999999999999888999999999999 999 7787653 4543 368889999999999999764
No 9
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.81 E-value=5.6e-20 Score=155.05 Aligned_cols=165 Identities=19% Similarity=0.203 Sum_probs=126.6
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C--CCCEEEEcCCCCcccccC----CCCceeecceEEEEeCCC-----
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S--EYNTIFNCTGLGARTLCN----DMHVIPVRGQTIRIKAPH----- 85 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g--~ad~VV~AaG~~s~~L~~----~~pl~p~rGq~~~~~~~~----- 85 (200)
++++++|++++. .+|++++... + .||.||+|+|.|+..|+. ++|+.|.|||++.++++.
T Consensus 158 ~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~~~~l~~~~g~~~pl~~~rg~~~~~~~~~~~~~~ 237 (389)
T 2gf3_A 158 ELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSN 237 (389)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGGHHHHGGGGTEECCCEEEEEEEEEECCCHHHHBG
T ss_pred HHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCccHHHHhhhhccCCceEEEEEEEEEEecCcccccc
Confidence 788889999998 4777775421 2 799999999999988764 389999999999987642
Q ss_pred ---cceEEec--CCeEEEEeCCCCC-eEEEccce-----ecCCCCCCC--ChHHHHHHHHHHHhhCCCCCCCCCcceeEe
Q psy1702 86 ---ITNFYKN--EYDTYIIPNGFDS-LVTLGGTQ-----NFGHVNRCV--ESTDTESILARTEELLPGVGACGGGQCWVG 152 (200)
Q Consensus 86 ---~~~~i~~--~~~~y~~p~~~~g-~~~iG~t~-----~~~~~~~~~--~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G 152 (200)
...++.. ++..|++|. .++ ++++|++. +.++.+..+ +.+..+.+++.+.++||.+.. ++.+.|+|
T Consensus 238 ~~~~p~~~~~~~~~~~y~~p~-~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~-~~~~~w~g 315 (389)
T 2gf3_A 238 DIDFPGFMVEVPNGIYYGFPS-FGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGANG-ELKRGAVC 315 (389)
T ss_dssp GGTCCEEEEEETTEEEEEECB-STTCCEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGGCS-CEEEEEEE
T ss_pred cccCCEEEEeCCCCcEEEcCC-CCCCcEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCCCC-CceEEEEE
Confidence 1122222 225899998 775 79999875 223345566 788899999999999999877 88899999
Q ss_pred ecCCCCC--ceeeeEEeCCC------eeccceeecHHHHHHHHHHHHHH
Q psy1702 153 LRPHRYR--VRVECEQTPGG------KVNAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 153 ~Rp~tpD--~~i~~~~~~~g------~~~~G~~~a~~~A~~~a~li~~~ 193 (200)
+||+||| |.|+..+..+| +...|+++++++|+.++++|.+.
T Consensus 316 ~r~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 316 MYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTG 364 (389)
T ss_dssp EEEECTTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHHHS
T ss_pred EeccCCCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHcCC
Confidence 9999999 88887532233 33368888999999999999864
No 10
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.80 E-value=1.3e-19 Score=152.63 Aligned_cols=165 Identities=18% Similarity=0.328 Sum_probs=132.6
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C--CCCEEEEcCCCCcccccC----CCCceeecceEEEEeCC--Ccce
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S--EYNTIFNCTGLGARTLCN----DMHVIPVRGQTIRIKAP--HITN 88 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g--~ad~VV~AaG~~s~~L~~----~~pl~p~rGq~~~~~~~--~~~~ 88 (200)
+++++.|++++. .+|++++... + .||.||+|+|.|+..|+. ++|+.|.|||++.++++ .++.
T Consensus 172 ~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 251 (382)
T 1ryi_A 172 KAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTK 251 (382)
T ss_dssp HHHHHTTCEEETTCCCCEEECSSSSEEEEETTEEEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEEEEEEEECCSSCCCS
T ss_pred HHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCceEEcCEEEECCChhHHHHHHhcCCCCceeccceEEEEECCCCCCccc
Confidence 778888999987 4787775321 2 799999999999987642 57999999999988764 2344
Q ss_pred EEecCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCCCCC--ceeeeEE
Q psy1702 89 FYKNEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPHRYR--VRVECEQ 166 (200)
Q Consensus 89 ~i~~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~tpD--~~i~~~~ 166 (200)
++..+ ..|++|. .++++++|++.+..+++..++.+..+.+++.+.+++|.+...++.+.|+|+||+|+| |.++..+
T Consensus 252 ~~~~~-~~~~~p~-~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~t~d~~p~ig~~~ 329 (382)
T 1ryi_A 252 TLYHD-HCYIVPR-KSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHP 329 (382)
T ss_dssp EEEET-TEEEEEC-TTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEECSSSCCEEEEET
T ss_pred eEEcC-CEEEEEc-CCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcCCCceeeEEEEecccCCCCCcEeccCC
Confidence 44444 3899998 788899999988777777888899999999999999999888899999999999999 7788653
Q ss_pred e------CCCeeccceeecHHHHHHHHHHHHHH
Q psy1702 167 T------PGGKVNAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 167 ~------~~g~~~~G~~~a~~~A~~~a~li~~~ 193 (200)
. ..|+...|+++++.+|+.++++|.+.
T Consensus 330 ~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~~ 362 (382)
T 1ryi_A 330 EDSRILFAAGHFRNGILLAPATGALISDLIMNK 362 (382)
T ss_dssp TEEEEEEEECCSSCTTTTHHHHHHHHHHHHTTC
T ss_pred CcCCEEEEEcCCcchHHHhHHHHHHHHHHHhCC
Confidence 1 23444468889999999999998763
No 11
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.79 E-value=1.5e-19 Score=151.64 Aligned_cols=164 Identities=15% Similarity=0.132 Sum_probs=123.9
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC--CCCEEEEcCCCCcccccCCCCceeecceEEEEeCCC-------cc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS--EYNTIFNCTGLGARTLCNDMHVIPVRGQTIRIKAPH-------IT 87 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g--~ad~VV~AaG~~s~~L~~~~pl~p~rGq~~~~~~~~-------~~ 87 (200)
+.+++.|++++.. +|++++.. .+ .||.||+|+|.|++.|+.++|+.|.|||++.+..+. .+
T Consensus 157 ~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~~~a~~vV~a~G~~s~~l~~~l~~~p~rg~~~~~~~~~~~~~~~~~p 236 (372)
T 2uzz_A 157 QLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFP 236 (372)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSSEEEEESSCEEEEEEEEECCGGGGGGTSTTCCCEEEECCEEEECCCGGGSTTTTCC
T ss_pred HHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCeEEcCEEEEcCCccHHhhccccCceEEEEEEEEEEeccccCccccCC
Confidence 7778899999884 78777542 12 799999999999999988899999999998886531 12
Q ss_pred eEEec--C-CeEEEEeCCCCCeEEEcccee---c----CCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCCC
Q psy1702 88 NFYKN--E-YDTYIIPNGFDSLVTLGGTQN---F----GHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPHR 157 (200)
Q Consensus 88 ~~i~~--~-~~~y~~p~~~~g~~~iG~t~~---~----~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~t 157 (200)
.+... + ...|++|. .++++++|++.. . ...+..++.+..+.+++.+.++||.+. ++...|+|+||+|
T Consensus 237 ~~~~~~~~~~~~y~~p~-~~~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~--~~~~~~~g~r~~t 313 (372)
T 2uzz_A 237 AFTGELPNGDQYYGFPA-ENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG--CCLYGAACTYDNS 313 (372)
T ss_dssp EEEEECTTCCEEEEECC-SSSCEEEEESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHSCSCC--CEEEECCCEEEEC
T ss_pred EEEEecCCCCeEEecCC-CCCeEEEEecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHCCCCC--ccceeeEEeeccC
Confidence 12221 2 35788898 677799998752 1 111233445678889999999999986 6789999999999
Q ss_pred CC--ceeeeEEe------CCCeeccceeecHHHHHHHHHHHHHH
Q psy1702 158 YR--VRVECEQT------PGGKVNAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 158 pD--~~i~~~~~------~~g~~~~G~~~a~~~A~~~a~li~~~ 193 (200)
|| |.|+..+. ..|+..+|+++++++|+.++++|.+.
T Consensus 314 ~d~~p~ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~la~~i~~~ 357 (372)
T 2uzz_A 314 PDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDK 357 (372)
T ss_dssp TTSCCCEEEETTEEEEEEECCCCSCCGGGHHHHHHHHHHHHTTC
T ss_pred CCCCeEEecCCCCCCEEEEeCCCccchhccHHHHHHHHHHHhCC
Confidence 99 78887532 24455578999999999999999764
No 12
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.77 E-value=1e-18 Score=148.05 Aligned_cols=165 Identities=10% Similarity=0.034 Sum_probs=129.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC--CCCEEEEcCCCCcccccC----CCCceeecceEEEEeCC--Ccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS--EYNTIFNCTGLGARTLCN----DMHVIPVRGQTIRIKAP--HIT 87 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g--~ad~VV~AaG~~s~~L~~----~~pl~p~rGq~~~~~~~--~~~ 87 (200)
+++++.|++++. .+|+++... .+ .+|.||+|+|.|+..|.. .+|+.|.+||++.+++. .+.
T Consensus 182 ~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 261 (405)
T 2gag_B 182 RKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIHAGKVALAGAGHSSVLAEMAGFELPIQSHPLQALVSELFEPVHP 261 (405)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCCEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEEEEEEEEEBCSCCC
T ss_pred HHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCceEECCEEEECCchhHHHHHHHcCCCCCccccceeEEEecCCccccC
Confidence 778889999988 477776532 12 689999999999977642 68999999999988652 233
Q ss_pred eEEec-CCeEEEEeCCCCCeEEEccceec-CCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCCCCC--ceee
Q psy1702 88 NFYKN-EYDTYIIPNGFDSLVTLGGTQNF-GHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPHRYR--VRVE 163 (200)
Q Consensus 88 ~~i~~-~~~~y~~p~~~~g~~~iG~t~~~-~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~tpD--~~i~ 163 (200)
.++.+ +...|++|. .++++++|++.+. .+.+...+.+..+.+++.+.+++|.+.+.++.+.|+|+||+|+| |.++
T Consensus 262 ~~~~~~~~~~y~~p~-~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~t~d~~p~ig 340 (405)
T 2gag_B 262 TVVMSNHIHVYVSQA-HKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFARAHVLRTWGGIVDTTMDASPIIS 340 (405)
T ss_dssp SEEEETTTTEEEEEC-TTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGGGGCEECEEEEEEEEEETTSCCEEE
T ss_pred ceEEeCCCcEEEEEc-CCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCccccCCcceEEeeccccCCCCCCEec
Confidence 44442 345899998 7888999998763 34556677888999999999999999888899999999999999 7888
Q ss_pred eEEeCCCe------eccceeecHHHHHHHHHHHHHH
Q psy1702 164 CEQTPGGK------VNAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 164 ~~~~~~g~------~~~G~~~a~~~A~~~a~li~~~ 193 (200)
..+ .+|. ...|+++++++|+.++++|.+.
T Consensus 341 ~~~-~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 341 KTP-IQNLYVNCGWGTGGFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp ECS-SBTEEEEECCGGGCSTTHHHHHHHHHHHHHHT
T ss_pred ccC-CCCEEEEecCCCchhhHHHHHHHHHHHHHhCC
Confidence 643 2343 3368888999999999999864
No 13
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.76 E-value=2.2e-18 Score=147.22 Aligned_cols=162 Identities=10% Similarity=0.054 Sum_probs=118.9
Q ss_pred HHHHHcCcEEEE-Eecc---------cccccc---------C--CCCEEEEcCCCCcccccC-----CCCceeecceEEE
Q psy1702 27 VLFKTAGGKVIE-KYIS---------SFSELG---------S--EYNTIFNCTGLGARTLCN-----DMHVIPVRGQTIR 80 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~---------~l~~~~---------g--~ad~VV~AaG~~s~~L~~-----~~pl~p~rGq~~~ 80 (200)
+++++.|++++. .+|+ ++.... + .||.||+|+|.|+..|.. .+|+.|.+||++.
T Consensus 180 ~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g~i~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~ 259 (405)
T 3c4n_A 180 QQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETRQIRAGVIIVAAGAAGPALVEQGLGLHTRHGRAYRQFPR 259 (405)
T ss_dssp HHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCEEEEEEEEEECCGGGHHHHHHHHHCCCCCCEEEEEECCE
T ss_pred HHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCcEEECCEEEECCCccHHHHHHHhcCCCCCcccceeEEEE
Confidence 777888999987 4777 765321 2 789999999999976532 5689999999988
Q ss_pred EeCCC--cceEEecCCeEEEEeCCCCCeEEEcccee--cCCCC----------CCCChHHHHHHHHHHHhhCCCCCCCC-
Q psy1702 81 IKAPH--ITNFYKNEYDTYIIPNGFDSLVTLGGTQN--FGHVN----------RCVESTDTESILARTEELLPGVGACG- 145 (200)
Q Consensus 81 ~~~~~--~~~~i~~~~~~y~~p~~~~g~~~iG~t~~--~~~~~----------~~~~~~~~~~ll~~~~~~~P~l~~~~- 145 (200)
++.+. ..+++... ..|++|. .++.+++|+++. ..+++ ...+.+..+.+++. .++||.+.+.+
T Consensus 260 ~~~~~~~~~~~~~~~-~~y~~p~-~~g~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~P~l~~~~~ 336 (405)
T 3c4n_A 260 LDLLSGAQTPVLRAS-GLTLRPQ-NGGYTLVPAIHHRDPHGYHPAGGSLTGVPTGLRRELLEDLVGL-MDAVPALAGEGL 336 (405)
T ss_dssp ECSCCCTTCCEEEET-TEEEEEE-TTEEEEECCCCSCBCSSCCCCCCCBTTBCCSSCHHHHHHHHHH-TTTCGGGGSSCB
T ss_pred ECCCCccCCCeEECC-cEEEEEc-CCCeEEEeccccccccCcCcccccccccccCCCHHHHHHHHHH-HHhCCCccccCc
Confidence 87542 23444443 4899999 888788888743 33333 22345667777655 48999987754
Q ss_pred --------CcceeEeecCCCCC--ceeeeEEeCCCeec-----cceeecHHHHHHHHHHHHHH
Q psy1702 146 --------GGQCWVGLRPHRYR--VRVECEQTPGGKVN-----AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 146 --------v~~~w~G~Rp~tpD--~~i~~~~~~~g~~~-----~G~~~a~~~A~~~a~li~~~ 193 (200)
+.+.|+|+||+|+| |.|+..+ +|++. +|.++++++|+.++++|.+.
T Consensus 337 ~~~r~~~~i~~~w~G~r~~t~D~~P~ig~~~--~gl~~a~G~~g~~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 337 ELGRSSADVPGAWLALPGGRPDAPPQAEELA--PGLHLLLGGPLADTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp CCCSSGGGSCEEEEEEGGGCTTCCCEEEEEE--TTEEEEECCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeeEEEeecCcCCCCCCEecccC--CCeEEEEccCcHHHHHHHHHHHHHHHHhCc
Confidence 88999999999999 8888765 56543 33578888999999998864
No 14
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.74 E-value=1.2e-17 Score=141.56 Aligned_cols=165 Identities=10% Similarity=-0.002 Sum_probs=124.2
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C--CCCEEEEcCCCCcccccC----CCCceeecceEEEEeCCC----c
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S--EYNTIFNCTGLGARTLCN----DMHVIPVRGQTIRIKAPH----I 86 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g--~ad~VV~AaG~~s~~L~~----~~pl~p~rGq~~~~~~~~----~ 86 (200)
+++++.|++++. .+|++|+... + .||.||+|+|.|+..|+. .+|+.|.|||++.++++. .
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~s~~l~~~~g~~~p~~~~~~~~~~~~~~~~~~~~ 240 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPYTNDLLEPLGARLAYSVYEMAIAAYRQATPVTEA 240 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGGHHHHHGGGTCCCCEEEEEEEEEEEEBCSCCSCC
T ss_pred HHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcChHHHhhhcCCCCCeeEEEEEEEEEeecCcccCC
Confidence 777888999998 4787765321 2 789999999999887743 589999999999987642 2
Q ss_pred ceEEec--CC-----eEEEEeCCCCC----eEEEcccee------cCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcce
Q psy1702 87 TNFYKN--EY-----DTYIIPNGFDS----LVTLGGTQN------FGHVNRCVESTDTESILARTEELLPGVGACGGGQC 149 (200)
Q Consensus 87 ~~~i~~--~~-----~~y~~p~~~~g----~~~iG~t~~------~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~ 149 (200)
+.++.. +. ..|++|. .++ ++++|++.+ ..+.+..++.+..+.+.+.+.++||.+.. .+.+.
T Consensus 241 p~~~~~~~~~~~~~~~~y~~p~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~-~~~~~ 318 (397)
T 2oln_A 241 PFWFAFQQPTPQDTNLFYGFGH-NPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHLPTVDP-DPVRT 318 (397)
T ss_dssp CEEEEECCCCSSSCCCEEECCC-CSSSSSSEEEEEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHCTTBCS-SCSEE
T ss_pred CEEEEecCCCCcccceEEECCC-CCCCCCceEEEEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhCCCCCC-CceeE
Confidence 222221 11 5899997 554 699997753 22234567788899999999999999876 78899
Q ss_pred eEeecC--CCCC--ceeeeEEe----CCCeec----cceeecHHHHHHHHHHHHHH
Q psy1702 150 WVGLRP--HRYR--VRVECEQT----PGGKVN----AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 150 w~G~Rp--~tpD--~~i~~~~~----~~g~~~----~G~~~a~~~A~~~a~li~~~ 193 (200)
|+|+|+ +||| |.|+..+. .+|++. +|+++++++|+.++++|.+.
T Consensus 319 ~~g~~~~p~t~D~~p~ig~~~~~~~~~~~l~~a~Gg~G~~~ap~~g~~la~~i~~~ 374 (397)
T 2oln_A 319 STCLAVLPTDPERQFFLGTARDLMTHGEKLVVYGAGWAFKFVPLFGRICADLAVED 374 (397)
T ss_dssp EEEEEEEESSTTCCCEEEESTTTSTTGGGEEEEEESSCGGGHHHHHHHHHHHHHHS
T ss_pred EEEEecCCcCCCCCeEeecCCccccCCCCEEEEeCcchhhccHHHHHHHHHHHhCC
Confidence 999988 9999 88887543 346543 56778888999999999864
No 15
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.74 E-value=9e-18 Score=147.31 Aligned_cols=167 Identities=13% Similarity=0.162 Sum_probs=126.0
Q ss_pred HHHHHcCcEEEE-Eeccccccc------------cC-----CCCEEEEcCCCCcccccC-------CCCceeecceEEEE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL------------GS-----EYNTIFNCTGLGARTLCN-------DMHVIPVRGQTIRI 81 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~------------~g-----~ad~VV~AaG~~s~~L~~-------~~pl~p~rGq~~~~ 81 (200)
+.++++|++++. .+|+++... .| .||.||||+|+|+..|.. ..|+.|.|||++++
T Consensus 157 ~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~ 236 (501)
T 2qcu_A 157 QMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVV 236 (501)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEE
T ss_pred HHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccccceeEEEEE
Confidence 788889999987 567665321 12 689999999999987632 26899999999999
Q ss_pred eCCC-c-ceEEe---cCCeEEEEeCCCCCeEEEccceec---CCCCCCCChHHHHHHHHHHHhhCC-CCCCCCCcceeEe
Q psy1702 82 KAPH-I-TNFYK---NEYDTYIIPNGFDSLVTLGGTQNF---GHVNRCVESTDTESILARTEELLP-GVGACGGGQCWVG 152 (200)
Q Consensus 82 ~~~~-~-~~~i~---~~~~~y~~p~~~~g~~~iG~t~~~---~~~~~~~~~~~~~~ll~~~~~~~P-~l~~~~v~~~w~G 152 (200)
+.+. . ..+++ +...+|++|+ .++.+++|+|... +..+..++.+..+.+++.+.++|| .+...++++.|+|
T Consensus 237 ~~~~~~~~~~~~~~~dg~~~~~~P~-~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~l~~~~v~~~~aG 315 (501)
T 2qcu_A 237 PRVHTQKQAYILQNEDKRIVFVIPW-MDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSG 315 (501)
T ss_dssp ECSSSCSCEEEEECTTSCEEEEEEE-TTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHHBSSCCCGGGCCEEEEE
T ss_pred CCCCCCceEEEeecCCCCEEEEEEc-CCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEEEEE
Confidence 8532 2 22333 2245899999 7787999999754 234667888999999999999999 8888899999999
Q ss_pred ecCCCCC--ceeee---E---E--e---CCCeec---cceeecHHHHHHHHHHHHHHh
Q psy1702 153 LRPHRYR--VRVEC---E---Q--T---PGGKVN---AGVGVVVGRKKRLTDLLLTFN 194 (200)
Q Consensus 153 ~Rp~tpD--~~i~~---~---~--~---~~g~~~---~G~~~a~~~A~~~a~li~~~~ 194 (200)
+||+++| |.++. + . . ..|++. +|+++++.+|+.+++++.+..
T Consensus 316 ~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 316 VRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp EECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS
T ss_pred EeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh
Confidence 9999998 43322 1 0 1 123332 679999999999999998765
No 16
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.73 E-value=5.4e-17 Score=144.64 Aligned_cols=166 Identities=15% Similarity=0.183 Sum_probs=122.7
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcccccC------C-CCceeecceEEE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGARTLCN------D-MHVIPVRGQTIR 80 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~~L~~------~-~pl~p~rGq~~~ 80 (200)
+.++++|++++. .+|+++... .+ .||.||||+|+|+..|.. . .+++|.|||+++
T Consensus 196 ~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~~i~p~rG~~l~ 275 (571)
T 2rgh_A 196 KKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSPKMRPTKGIHLV 275 (571)
T ss_dssp HHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCCCCBCCEEEEEEE
T ss_pred HHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccCceeeccceEEEE
Confidence 777889999987 467665321 11 689999999999988743 1 569999999999
Q ss_pred EeCC--Ccc-eEEe----cC-CeEEEEeCCCCCeEEEccceec---CCCCCCCChHHHHHHHHHHHhhCCCC--CCCCCc
Q psy1702 81 IKAP--HIT-NFYK----NE-YDTYIIPNGFDSLVTLGGTQNF---GHVNRCVESTDTESILARTEELLPGV--GACGGG 147 (200)
Q Consensus 81 ~~~~--~~~-~~i~----~~-~~~y~~p~~~~g~~~iG~t~~~---~~~~~~~~~~~~~~ll~~~~~~~P~l--~~~~v~ 147 (200)
++.+ ... .+++ .+ ..+|++|. . +.+++|+|.+. +..+..++.+..+.+++.+.++||.+ ...+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~dgr~~~~~P~-~-~~~~iG~t~~~~~~~~~~~~~~~~~~~~ll~~~~~~~P~~~l~~~~v~ 353 (571)
T 2rgh_A 276 VDAKKLPVPQPTYFDTGKQDGRMVFAIPR-E-NKTYFGTTDTDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADIE 353 (571)
T ss_dssp EEGGGSCCSSCEEEECSSSSSCEEEEEEE-T-TEEEECCCCEECCSCSSSCCCCHHHHHHHHHHHHHHSTTTCCCGGGCC
T ss_pred eccccCCCCcEEEEeccCCCCcEEEEEEc-C-CeEEEcCCCcCCCCCcCCCCCCHHHHHHHHHHHHHhcCccCCchhcee
Confidence 9753 122 3333 12 35799998 6 45999999763 23467788999999999999999974 677899
Q ss_pred ceeEeecCCCCC-c----eeeeEE----eCCCeec---cceeecHHHHHHHHHHHHHHh
Q psy1702 148 QCWVGLRPHRYR-V----RVECEQ----TPGGKVN---AGVGVVVGRKKRLTDLLLTFN 194 (200)
Q Consensus 148 ~~w~G~Rp~tpD-~----~i~~~~----~~~g~~~---~G~~~a~~~A~~~a~li~~~~ 194 (200)
+.|+|+||+++| . .+.+++ ..+|++. ++||+++.+|+.+++++.+..
T Consensus 354 ~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~~gl~~v~GGk~Tt~r~~Ae~~~~~i~~~l 412 (571)
T 2rgh_A 354 ASWAGLRPLLIGNSGSPSTISRGSSLEREPDGLLTLSGGKITDYRKMAEGALRLIRQLL 412 (571)
T ss_dssp EEEEEEECCBCC-----------EEEEECTTSCEEEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred EEeEEeeeccCCCCCCcccCCCCcEEecCCCCeEEEeCcchhhHHHHHHHHHHHHHHHh
Confidence 999999999987 2 122222 2357653 558999999999999999876
No 17
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.71 E-value=4.7e-17 Score=144.79 Aligned_cols=167 Identities=17% Similarity=0.202 Sum_probs=124.4
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcccccC------CCCceeecceEEEE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGARTLCN------DMHVIPVRGQTIRI 81 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~~L~~------~~pl~p~rGq~~~~ 81 (200)
+.++++|++++. .+|+++... .+ .|+.||||+|+|+..|.. ..+++|.||+++++
T Consensus 178 ~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~~v~p~kG~~lvl 257 (561)
T 3da1_A 178 KEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGKYLKLSKGVHLVV 257 (561)
T ss_dssp HHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSSEEEEEEEEEEEE
T ss_pred HHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCceEEeccEEEEEE
Confidence 678889999998 577766421 11 689999999999987742 36899999999999
Q ss_pred eCC--Ccce-EEe---cC-CeEEEEeCCCCCeEEEccceec---CCCCCCCChHHHHHHHHHHHhhCCCCC--CCCCcce
Q psy1702 82 KAP--HITN-FYK---NE-YDTYIIPNGFDSLVTLGGTQNF---GHVNRCVESTDTESILARTEELLPGVG--ACGGGQC 149 (200)
Q Consensus 82 ~~~--~~~~-~i~---~~-~~~y~~p~~~~g~~~iG~t~~~---~~~~~~~~~~~~~~ll~~~~~~~P~l~--~~~v~~~ 149 (200)
+.+ .... +++ .+ ..+|++|+ . |++++|+|.+. ...+..++.+.++.+++.+.++||.+. ..++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~dgr~v~~iP~-~-g~~~iGtT~~~~~~~~~~~~~t~~~i~~ll~~~~~~~P~l~~~~~~v~~~ 335 (561)
T 3da1_A 258 DQSRFPLRQAVYFDTESDGRMIFAIPR-E-GKTYIGTTDTFYDKDIASPRMTVEDRDYILAAANYMFPSLRLTADDVESS 335 (561)
T ss_dssp EGGGSCCSSEEEECCSSSCCCEEEEEE-T-TEEEECCCCEEECSCTTCCCCCHHHHHHHHHHHHHHCTTCCCCTTTEEEE
T ss_pred CCccCCCceEEEeccCCCCcEEEEEec-C-CCEEEcCCCCccCCCcCCCCCCHHHHHHHHHHHHHhCCCCCCChhhEEEE
Confidence 853 2223 333 22 34789998 5 45999999863 235678899999999999999999986 7889999
Q ss_pred eEeecCCCCCc-----eeeeEE----eCCCeec---cceeecHHHHHHHHHHHHHHhh
Q psy1702 150 WVGLRPHRYRV-----RVECEQ----TPGGKVN---AGVGVVVGRKKRLTDLLLTFNA 195 (200)
Q Consensus 150 w~G~Rp~tpD~-----~i~~~~----~~~g~~~---~G~~~a~~~A~~~a~li~~~~~ 195 (200)
|+|+||.++|+ -+.+.. ..+|++. +.||+++.+|+.++|++.+...
T Consensus 336 ~aGlRPl~~~~~~~~~~~sR~~~i~~~~~gli~i~Ggk~Tt~r~mAe~~~d~~~~~~~ 393 (561)
T 3da1_A 336 WAGLRPLIHEEGKKASEISRKDEIFFSDSGLISIAGGKLTGYRKMAERTVDAVAQGLN 393 (561)
T ss_dssp EEEEEEEEEC-----------CCEEECSSCCEEECCCCSTTHHHHHHHHHHHHHHHHT
T ss_pred eEEeccccCCCCCCccccccceEEEecCCCeEEEeCChhhhHHHHHHHHHHHHHHhcC
Confidence 99999997551 122221 1257654 6699999999999999988754
No 18
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.71 E-value=2.3e-17 Score=152.64 Aligned_cols=165 Identities=15% Similarity=0.150 Sum_probs=126.0
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC--CCCEEEEcCCCCccccc---C-CCCceeecceEEEEeCC-Cc--
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS--EYNTIFNCTGLGARTLC---N-DMHVIPVRGQTIRIKAP-HI-- 86 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g--~ad~VV~AaG~~s~~L~---~-~~pl~p~rGq~~~~~~~-~~-- 86 (200)
+.++++|++++. .+|++|+.. .+ .||.||+|+|+|+..|. . ++|+.|+|||++++++. .+
T Consensus 159 ~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~p~~g~~~~~~~~~~~~~ 238 (830)
T 1pj5_A 159 KRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKIGAMIGMAVPLLPLAHQYVKTTPVPAQQG 238 (830)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECCGGGHHHHHHTTTCCCCCEEEEEEEEEESCCGGGTT
T ss_pred HHHHHcCCEEECCceEEEEEEeCCEEEEEEECCcEEECCEEEECCccchHHHHHHhCCCccceeceeEEEEEecCccccc
Confidence 788889999987 477776532 12 79999999999998773 2 68999999999998752 11
Q ss_pred --------c-eEEe-cCCeEEEEeCCCCCeEEEccceec---------CC------------CCCCCChHHHHHHHHHHH
Q psy1702 87 --------T-NFYK-NEYDTYIIPNGFDSLVTLGGTQNF---------GH------------VNRCVESTDTESILARTE 135 (200)
Q Consensus 87 --------~-~~i~-~~~~~y~~p~~~~g~~~iG~t~~~---------~~------------~~~~~~~~~~~~ll~~~~ 135 (200)
. +++. .+...|++|. .+ ++++|++... .. .+...+.+..+.+++.+.
T Consensus 239 ~~~~~~~~~~pv~~~~~~~~y~r~~-~~-~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 316 (830)
T 1pj5_A 239 RNDQPNGARLPILRHQDQDLYYREH-GD-RYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAWEATK 316 (830)
T ss_dssp TSCTTTCCCSCEEEEGGGTEEEEEE-TT-EEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHHHHHHHHHH
T ss_pred ccccccCCCCCeEEcCCCCEEEEEe-CC-eEEEeccCCCCcccCcccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 1 1222 2334899998 66 4899987421 11 123457788999999999
Q ss_pred hhCCCCCCCCCcceeEeecCCCCC--ceeeeEEeCCCeec---cceeecHHHHHHHHHHHHHH
Q psy1702 136 ELLPGVGACGGGQCWVGLRPHRYR--VRVECEQTPGGKVN---AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 136 ~~~P~l~~~~v~~~w~G~Rp~tpD--~~i~~~~~~~g~~~---~G~~~a~~~A~~~a~li~~~ 193 (200)
+++|.+.+.++.+.|+|+||+||| |.|+..+..+|+++ .|+++++++|+.++++|.+.
T Consensus 317 ~~~P~l~~~~i~~~w~G~r~~t~D~~PiIG~~p~~~gl~va~G~G~~~ap~~g~~la~li~~~ 379 (830)
T 1pj5_A 317 QLLPALADSEIEDGFNGIFSFTPDGGPLLGESKELDGFYVAEAVWVTHSAGVAKAMAELLTTG 379 (830)
T ss_dssp HHCGGGGGSCEEEEEEEEEEECTTSCCEEEECSSSBTEEEEESCCGGGHHHHHHHHHHHHHHS
T ss_pred HhCccccccCcceEEEeecccCCCCCeeeccCCCCCCEEEEECchHHhhHHHHHHHHHHHhCC
Confidence 999999989999999999999999 88887654467665 36788888999999999864
No 19
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.69 E-value=1.8e-16 Score=136.04 Aligned_cols=167 Identities=11% Similarity=0.066 Sum_probs=118.5
Q ss_pred HHHHHcCcEEEEE----eccccccc----------cC---CCCEEEEcCCCCcccccC-CCCceeecceEEEEeCCC---
Q psy1702 27 VLFKTAGGKVIEK----YISSFSEL----------GS---EYNTIFNCTGLGARTLCN-DMHVIPVRGQTIRIKAPH--- 85 (200)
Q Consensus 27 ~~~~~~Gv~~~~~----~V~~l~~~----------~g---~ad~VV~AaG~~s~~L~~-~~pl~p~rGq~~~~~~~~--- 85 (200)
++++++|++|+.. +|++|... .+ .||.||+|+|.|+..|+. ..++.|.++++..+..+.
T Consensus 169 ~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~l~~~~~p~~~~~~~~~l~~~~~ 248 (438)
T 3dje_A 169 REAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLDFKNQLRPTAWTLVHIALKPEER 248 (438)
T ss_dssp HHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSCCTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcCcccceeeEEEEEEEEEcChHHh
Confidence 7888899999984 67776532 12 799999999999999875 457888877666554321
Q ss_pred --c-c-eEEe-cCCeEEEEeCCCCCeEEEc----cceecC-C---------C-CCCCChHHHHHHHHHHHhhCCCCCCCC
Q psy1702 86 --I-T-NFYK-NEYDTYIIPNGFDSLVTLG----GTQNFG-H---------V-NRCVESTDTESILARTEELLPGVGACG 145 (200)
Q Consensus 86 --~-~-~~i~-~~~~~y~~p~~~~g~~~iG----~t~~~~-~---------~-~~~~~~~~~~~ll~~~~~~~P~l~~~~ 145 (200)
+ . +++. .+..+|++|.+.++.+++| +..... . . +...+.+..+.+.+.+.++||.|.+.+
T Consensus 249 ~~~~~~p~~~~~~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~P~l~~~~ 328 (438)
T 3dje_A 249 ALYKNIPVIFNIERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQIPKEAETRVRALLKETMPQLADRP 328 (438)
T ss_dssp HHHTTCCEEEETTTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEECCCCCSSCBHHHHHHHHHHHHHHCGGGTTCC
T ss_pred hhhcCCCEEEECCCceecCCCCCCCeEEEEeCCCCccCCccCCCcccccCCcccccCCHHHHHHHHHHHHHhCcccccCC
Confidence 1 1 2333 3345777776223546674 221110 0 0 133456778899999999999999999
Q ss_pred CcceeEeecCCCCC--ceeeeEEeCCCeec------cceeecHHHHHHHHHHHHHH
Q psy1702 146 GGQCWVGLRPHRYR--VRVECEQTPGGKVN------AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 146 v~~~w~G~Rp~tpD--~~i~~~~~~~g~~~------~G~~~a~~~A~~~a~li~~~ 193 (200)
+.+.|+|+||+||| |.|+..+..+|++. +|+++++++|+.++++|.+.
T Consensus 329 ~~~~~~g~~~~t~D~~piig~~p~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~ 384 (438)
T 3dje_A 329 FSFARICWCADTANREFLIDRHPQYHSLVLGCGASGRGFKYLPSIGNLIVDAMEGK 384 (438)
T ss_dssp CSEEEEEEEEECTTSCCEEEECSSCTTEEEEECCTTCCGGGTTTHHHHHHHHHHTC
T ss_pred cceeeEEEeCcCCCCCeEEeecCCCCCEEEEECCCCcchhhhHHHHHHHHHHHhCC
Confidence 99999999999999 88887654456543 67788888999999999764
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.42 E-value=0.00036 Score=58.04 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=75.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC---CCCEEEEcCCCCccc--cc-CCC-Ccee---ecceEEEEe
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS---EYNTIFNCTGLGART--LC-NDM-HVIP---VRGQTIRIK 82 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g---~ad~VV~AaG~~s~~--L~-~~~-pl~p---~rGq~~~~~ 82 (200)
+++++.|++++. .+|++++.. .+ .||.||.|+|.+|.- .+ ... +..+ ..+....+.
T Consensus 110 ~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (397)
T 3cgv_A 110 ALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMI 189 (397)
T ss_dssp HHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEE
T ss_pred HHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEec
Confidence 777788999886 366655321 11 689999999999831 11 122 2212 222222333
Q ss_pred CCC--cc--eEEe----cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeec
Q psy1702 83 APH--IT--NFYK----NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLR 154 (200)
Q Consensus 83 ~~~--~~--~~i~----~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~R 154 (200)
... .. .+.. .++..|++|. .+++..+|.+...... .+.......++...+.+|.+...++.+.|.|..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~g~~~~~P~-~~~~~~vg~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 265 (397)
T 3cgv_A 190 NVDVDPDYTDFYLGSIAPAGYIWVFPK-GEGMANVGIGSSINWI---HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGV 265 (397)
T ss_dssp SCCCCTTEEEEECSTTSTTEEEEEEEE-ETTEEEEEEEEETTTC---SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEE
T ss_pred cCCCCCCcEEEEeCCcCCCceEEEEEC-CCCeEEEEEEeccccc---cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeee
Confidence 211 11 1221 2356788998 7887788877654332 233455566666666666666677888999998
Q ss_pred CCCC
Q psy1702 155 PHRY 158 (200)
Q Consensus 155 p~tp 158 (200)
|++.
T Consensus 266 p~~~ 269 (397)
T 3cgv_A 266 SVSK 269 (397)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 8743
No 21
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.01 E-value=0.0044 Score=53.68 Aligned_cols=159 Identities=13% Similarity=0.066 Sum_probs=86.4
Q ss_pred HHHHHcCcEEEEEeccccccc-----------cC---CCCEEEEcCCCCcccccC--CCC------ceeecceEE-EEeC
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL-----------GS---EYNTIFNCTGLGARTLCN--DMH------VIPVRGQTI-RIKA 83 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~-----------~g---~ad~VV~AaG~~s~~L~~--~~p------l~p~rGq~~-~~~~ 83 (200)
+++++.|++++..+|++++.. .| .+|.||.|+|.+|..+.. ..+ ..|....+. .++.
T Consensus 181 ~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 260 (511)
T 2weu_A 181 EYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPR 260 (511)
T ss_dssp HHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEEC
T ss_pred HHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEecc
Confidence 777889999987666666431 12 799999999999875421 222 233333222 3332
Q ss_pred CC---cce--E--EecCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeecCC
Q psy1702 84 PH---ITN--F--YKNEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLRPH 156 (200)
Q Consensus 84 ~~---~~~--~--i~~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~Rp~ 156 (200)
+. ... . ....+..|++|. .+ +..+|..+... ..+.+.....+.......|.+.....+..|.|.++.
T Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~P~-~~-~~~~g~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (511)
T 2weu_A 261 ENDEDMRPYTTATAMSAGWMWTIPL-FK-RDGNGYVYSDE----FISPEEAERELRSTVAPGRDDLEANHIQMRIGRNER 334 (511)
T ss_dssp SSGGGCCSSEEEEEETTEEEEEEEC-SS-EEEEEEEECTT----TSCHHHHHHHHHHHHCTTCTTSCCEEEECCCEEESC
T ss_pred CCCCCCCcceeceecCCCcEEEEEC-CC-ceEEEEEECCC----CCCHHHHHHHHHHHhCcccccccceeEEeecccccc
Confidence 11 111 1 123456888998 66 47777654321 123444433333333445555556677788888775
Q ss_pred CC-C--ceeeeEE-eCCCeeccceeecHHHHHHHHHHHH
Q psy1702 157 RY-R--VRVECEQ-TPGGKVNAGVGVVVGRKKRLTDLLL 191 (200)
Q Consensus 157 tp-D--~~i~~~~-~~~g~~~~G~~~a~~~A~~~a~li~ 191 (200)
.. + ..+|... ...-+...|+.++...|..+++++.
T Consensus 335 ~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~ 373 (511)
T 2weu_A 335 TWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFP 373 (511)
T ss_dssp SEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhc
Confidence 43 3 4455321 1111122455555556777777654
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.65 E-value=0.0013 Score=55.29 Aligned_cols=165 Identities=10% Similarity=-0.043 Sum_probs=83.0
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----------cC-----CCCEEEEcCCCCcc--cccC-CCCceeecceEEEE--eCC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----------GS-----EYNTIFNCTGLGAR--TLCN-DMHVIPVRGQTIRI--KAP 84 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----------~g-----~ad~VV~AaG~~s~--~L~~-~~pl~p~rGq~~~~--~~~ 84 (200)
+.+++.|++++. .+|++++.. .| .||.||+|+|.++. +.+. +.+..+...+.+.+ ...
T Consensus 114 ~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~ 193 (421)
T 3nix_A 114 DEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDV 193 (421)
T ss_dssp HHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECT
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCC
Confidence 778888999987 477766432 12 58999999999983 2222 22333333443332 211
Q ss_pred ----Cc--ce--EEe----cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCC----CCCCCcc
Q psy1702 85 ----HI--TN--FYK----NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGV----GACGGGQ 148 (200)
Q Consensus 85 ----~~--~~--~i~----~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l----~~~~v~~ 148 (200)
.. .. +.. ..+..|++|. .++++.+|-+......+.. ....++.++...+.+|.+ .......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~g~~~~~P~-~~~~~~vg~~~~~~~~~~~--~~~~~~~l~~~~~~~p~~~~~l~~~~~~~ 270 (421)
T 3nix_A 194 KRPVAAEMEGNRITAVVHKPKVWIWVIPF-SNGNTSVGFVGEPSYFDEY--TGTPEERMRAMIANEGHIAERFKSEEFLF 270 (421)
T ss_dssp TCCC----CCSEEEEEEEETTEEEEEEEC-TTSEEEEEEEECHHHHTTS--CSCHHHHHHHHHHTCTTTHHHHTTCCBSS
T ss_pred cCCCccCCCCeEEEEEeCCCCEEEEEEEE-CCCCEEEEEEecHHHhhhc--CCCHHHHHHHHHHhCcHHHHHHhcCcccc
Confidence 11 11 111 2356788998 8887778766543211110 112334444555556654 2333332
Q ss_pred eeEeecCC-------CCC--ceeeeEE-eCCCeeccceeecHHHHHHHHHHHHHHh
Q psy1702 149 CWVGLRPH-------RYR--VRVECEQ-TPGGKVNAGVGVVVGRKKRLTDLLLTFN 194 (200)
Q Consensus 149 ~w~G~Rp~-------tpD--~~i~~~~-~~~g~~~~G~~~a~~~A~~~a~li~~~~ 194 (200)
.+..+... ..| +.+|... ..+.+...|+.++...|..+++.+.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~ 326 (421)
T 3nix_A 271 EPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFL 326 (421)
T ss_dssp CCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHh
Confidence 33333222 222 2233210 0011122556666668888888887653
No 23
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.88 E-value=0.038 Score=48.48 Aligned_cols=159 Identities=10% Similarity=0.062 Sum_probs=78.0
Q ss_pred HHHHHc-CcEEEEEeccccccc-----------cC---CCCEEEEcCCCCcccccC--CCCc------eeecceE-EEEe
Q psy1702 27 VLFKTA-GGKVIEKYISSFSEL-----------GS---EYNTIFNCTGLGARTLCN--DMHV------IPVRGQT-IRIK 82 (200)
Q Consensus 27 ~~~~~~-Gv~~~~~~V~~l~~~-----------~g---~ad~VV~AaG~~s~~L~~--~~pl------~p~rGq~-~~~~ 82 (200)
+.+++. |++++..+|++++.. .| .||.||.|+|.+|..+.. ..+. .+....+ +.++
T Consensus 202 ~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 281 (550)
T 2e4g_A 202 RFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVP 281 (550)
T ss_dssp HHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEE
T ss_pred HHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeec
Confidence 777888 999987777666421 12 799999999999875422 1121 1222222 1222
Q ss_pred CC-----Ccc-e-EEe-cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeec
Q psy1702 83 AP-----HIT-N-FYK-NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLR 154 (200)
Q Consensus 83 ~~-----~~~-~-~i~-~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~R 154 (200)
.. ... . ... ..++.+++|. .+. ..+|..+.. . ..+.+.....+.......|.+...+.+..+.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~g~~~~ipl-~~~-~~~g~v~~~-~---~~~~~~~~~~l~~~~~~~p~l~~~~~i~~~~~~~ 355 (550)
T 2e4g_A 282 HDDDANGVEPFTSAIAMKSGWTWKIPM-LGR-FGTGYVYSS-R---FATEDEAVREFCEMWHLDPETQPLNRIRFRVGRN 355 (550)
T ss_dssp CCHHHHCCCSSEEEEECSSEEEEEEEC-SSE-EEEEEEECT-T---TSCHHHHHHHHHHHTTCCTTTSCCEEEECCCEEE
T ss_pred ccCCcccCCCceeeeecCCceEEEccC-CCc-cceEEEEec-C---CCChHHHHHHHHHhhCcCcccCCCceEEecCCCc
Confidence 11 111 1 112 3456778897 553 666655421 1 1234444444443333345454444555556665
Q ss_pred CCC-CC--ceeeeE-EeCCCeeccceeecHHHHHHHHHHHH
Q psy1702 155 PHR-YR--VRVECE-QTPGGKVNAGVGVVVGRKKRLTDLLL 191 (200)
Q Consensus 155 p~t-pD--~~i~~~-~~~~g~~~~G~~~a~~~A~~~a~li~ 191 (200)
+.. .+ ..+|.. ....-+...|+.++.-.|..+++++.
T Consensus 356 ~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~ 396 (550)
T 2e4g_A 356 RRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP 396 (550)
T ss_dssp SCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred cccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc
Confidence 522 22 223321 00000111355555556777766553
No 24
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.66 E-value=0.04 Score=45.09 Aligned_cols=163 Identities=10% Similarity=0.072 Sum_probs=86.1
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----------cC-----CCCEEEEcCCCCcc--cccC-CCCceeecceEEEE----e
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----------GS-----EYNTIFNCTGLGAR--TLCN-DMHVIPVRGQTIRI----K 82 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----------~g-----~ad~VV~AaG~~s~--~L~~-~~pl~p~rGq~~~~----~ 82 (200)
+.+++.|++++. .+|+++... .+ .||.||-|.|..|. +.+. ..+..+........ .
T Consensus 110 ~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~ 189 (397)
T 3oz2_A 110 ALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMI 189 (397)
T ss_dssp HHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEE
T ss_pred HHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEee
Confidence 778888999987 355554321 11 68999999999985 2221 11122222222111 1
Q ss_pred CCC--cc--eEEe----cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCcceeEeec
Q psy1702 83 APH--IT--NFYK----NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGGGQCWVGLR 154 (200)
Q Consensus 83 ~~~--~~--~~i~----~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v~~~w~G~R 154 (200)
... .. .+.. ..+..++.|. .++...+|-....+.. ......+..+++..+..|.+.....++.+.|..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~vg~~~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~ 265 (397)
T 3oz2_A 190 NVDVDPDYTDFYLGSIAPAGYIWVFPK-GEGMANVGIGSSINWI---HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGV 265 (397)
T ss_dssp SCCCCTTEEEEECSTTSTTEEEEEEEE-ETTEEEEEEEEETTTS---CSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEE
T ss_pred ccccCcccceeeeeccCCCceEEEeec-ccceeEEEEeeccchh---hhhhhHHHHHHHHHHhCccccccceeeeeeccc
Confidence 111 11 1222 1345667887 7775666654333222 234556667777777778777777778888877
Q ss_pred CCCCC--cee-eeEEe---CCCeec----cceeecHHHHHHHHHHHHHH
Q psy1702 155 PHRYR--VRV-ECEQT---PGGKVN----AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 155 p~tpD--~~i-~~~~~---~~g~~~----~G~~~a~~~A~~~a~li~~~ 193 (200)
|.... +.. ++.-. ..+.+. .|+.+|...|..+|+.+.+.
T Consensus 266 ~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~ 314 (397)
T 3oz2_A 266 SVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEA 314 (397)
T ss_dssp ECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 76543 211 11111 112221 34444554677777766554
No 25
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.30 E-value=0.022 Score=50.68 Aligned_cols=165 Identities=13% Similarity=0.037 Sum_probs=80.0
Q ss_pred HHHHHcCcEEEEE-eccccccc-----------cC-----CCCEEEEcCCCCcccc--cC-CCCceeecceEEE--EeC-
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL-----------GS-----EYNTIFNCTGLGARTL--CN-DMHVIPVRGQTIR--IKA- 83 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~-----------~g-----~ad~VV~AaG~~s~~L--~~-~~pl~p~rGq~~~--~~~- 83 (200)
+.+++.|++++.. +|+++... .| .||.||.|+|.+|.-. +. ..+-...++..+. +..
T Consensus 136 ~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~ 215 (591)
T 3i3l_A 136 DEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLK 215 (591)
T ss_dssp HHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecC
Confidence 7788899999874 66665421 12 6899999999988421 11 1111112222222 111
Q ss_pred -----CCcceEE---ecCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCC----------CCCC
Q psy1702 84 -----PHITNFY---KNEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGV----------GACG 145 (200)
Q Consensus 84 -----~~~~~~i---~~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l----------~~~~ 145 (200)
+...... ..+++.|++|. .++.+.++-+......+ .......+.+++...+.+|.+ ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~G~~w~iPl-~~~~~sv~~~~~~~~~~-~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~ 293 (591)
T 3i3l_A 216 DPFEGDLKGTTYSITFEDGWVWMIPI-KDDLYSVGLVVDRSKSA-EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVR 293 (591)
T ss_dssp CSCCSTTTTCEEEEEETTEEEEEEEC-SSSEEEEEEEEEGGGHH-HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCE
T ss_pred ccccCCCCCceEEEEcCCcEEEEEEC-CCCeEEEEEEcCHHHHh-hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCce
Confidence 1111111 14567889998 77766676554332111 011112334444444444422 1234
Q ss_pred CcceeEeec-CCCCC--ceeeeEE-eCCCeeccceeecHHHHHHHHHHHHHH
Q psy1702 146 GGQCWVGLR-PHRYR--VRVECEQ-TPGGKVNAGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 146 v~~~w~G~R-p~tpD--~~i~~~~-~~~g~~~~G~~~a~~~A~~~a~li~~~ 193 (200)
....|.+.+ ....+ ..+|... ...-+...|+.++...|..+++.+.+.
T Consensus 294 ~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~ 345 (591)
T 3i3l_A 294 IVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRI 345 (591)
T ss_dssp EEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 556677643 23333 3344321 001111245555555677777766553
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.49 E-value=0.25 Score=42.97 Aligned_cols=39 Identities=10% Similarity=0.153 Sum_probs=29.8
Q ss_pred HHHHHcCcEEEEEeccccccc-----------cC---CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL-----------GS---EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~-----------~g---~ad~VV~AaG~~s~~L 65 (200)
+.+++.|++++..+|++++.. .| .+|.||.|+|.+|..+
T Consensus 173 ~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~ 225 (538)
T 2aqj_A 173 RWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLI 225 (538)
T ss_dssp HHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCC
T ss_pred HHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhH
Confidence 777888999988777666421 12 7999999999998754
No 27
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.36 E-value=0.48 Score=40.12 Aligned_cols=162 Identities=12% Similarity=-0.019 Sum_probs=82.4
Q ss_pred HHHHHcCcEEEE-Eecccccc------------c-cC-----CCCEEEEcCCCCccc--ccC-CCC----ceeecceE--
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE------------L-GS-----EYNTIFNCTGLGART--LCN-DMH----VIPVRGQT-- 78 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~------------~-~g-----~ad~VV~AaG~~s~~--L~~-~~p----l~p~rGq~-- 78 (200)
+++++.|++++. .+|+++.. . .| .||.||.|.|.++.- .+. ..| .++...++
T Consensus 108 ~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~ 187 (453)
T 3atr_A 108 KEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAY 187 (453)
T ss_dssp HHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEE
T ss_pred HHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeee
Confidence 777778999887 45654421 0 12 789999999999862 222 222 12212222
Q ss_pred ---EEEeCCC--cc--eEEe-----cCCeEEEEeCCCCCeEEEccceecCCCCCCCChHHHHHHHHHHHhhCCCCCCCCC
Q psy1702 79 ---IRIKAPH--IT--NFYK-----NEYDTYIIPNGFDSLVTLGGTQNFGHVNRCVESTDTESILARTEELLPGVGACGG 146 (200)
Q Consensus 79 ---~~~~~~~--~~--~~i~-----~~~~~y~~p~~~~g~~~iG~t~~~~~~~~~~~~~~~~~ll~~~~~~~P~l~~~~v 146 (200)
+.++.+. .. .++. .++..+++|. .++++.+|.+....... .+ ..+.+.+.+.++.|.+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~-~~~~~~vg~~~~~~~~~--~~--~~~~~~~~l~~~~~~~~~~~~ 262 (453)
T 3atr_A 188 REVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPK-GKNKVNVGLGIQGGMGY--PS--IHEYYKKYLDKYAPDVDKSKL 262 (453)
T ss_dssp EEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEE-ETTEEEEEEEEESSSCC--CC--HHHHHHHHHHHHCTTEEEEEE
T ss_pred EEEEecCCCccCCCeEEEEECCCCCCCcEEEEEEC-CCCeEEEEEEecCCCCC--CC--HHHHHHHHHHhhhhhcCCCeE
Confidence 1222221 11 1222 1355778898 77777777665432211 11 223333444445666655567
Q ss_pred cceeEeecCCCCC-ce--eeeEEe---CCCeec----cceeecHHHHHHHHHHHHHH
Q psy1702 147 GQCWVGLRPHRYR-VR--VECEQT---PGGKVN----AGVGVVVGRKKRLTDLLLTF 193 (200)
Q Consensus 147 ~~~w~G~Rp~tpD-~~--i~~~~~---~~g~~~----~G~~~a~~~A~~~a~li~~~ 193 (200)
++.|.++.|.... +. -++.-. ..+.+. .|+.++.-.|..+++.+.+.
T Consensus 263 ~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~ 319 (453)
T 3atr_A 263 LVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSA 319 (453)
T ss_dssp EEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 7778787765322 11 111111 111121 34445555777888877654
No 28
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=88.39 E-value=2.8 Score=36.78 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=27.9
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----------cC----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----------GS----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----------~g----~ad~VV~AaG~~s~ 63 (200)
+++++.|++++. .+|++++.. .| .||.||.|.|.+|.
T Consensus 156 ~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 156 EHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRST 208 (570)
T ss_dssp HHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCH
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCch
Confidence 777778999887 467766432 12 79999999999983
No 29
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=87.37 E-value=0.43 Score=40.34 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEE-Eecccccccc----------C--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG----------S--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~----------g--~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++|+... + .||+||+|++++..
T Consensus 242 ~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 242 THLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHHHH
T ss_pred HHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHHHH
Confidence 777888999988 4788775321 2 69999999998854
No 30
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=81.43 E-value=20 Score=31.40 Aligned_cols=14 Identities=7% Similarity=0.038 Sum_probs=12.7
Q ss_pred CCCEEEEcCCCCcc
Q psy1702 50 EYNTIFNCTGLGAR 63 (200)
Q Consensus 50 ~ad~VV~AaG~~s~ 63 (200)
.||.||.|.|.++.
T Consensus 205 ~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 205 HAKVTIFAEGCHGH 218 (584)
T ss_dssp ECSEEEECCCTTCH
T ss_pred ECCEEEEeeCCCch
Confidence 68999999999985
No 31
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.97 E-value=1.5 Score=33.55 Aligned_cols=39 Identities=5% Similarity=-0.089 Sum_probs=28.8
Q ss_pred HHHHHc-CcEEEEEeccccccc----------cC---CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTA-GGKVIEKYISSFSEL----------GS---EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~-Gv~~~~~~V~~l~~~----------~g---~ad~VV~AaG~~s~~L 65 (200)
+.+++. |++++..+|+++... .+ .+|.||+|+|.+++..
T Consensus 76 ~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 76 YLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred HHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 777776 999987667665421 12 7999999999987754
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=77.82 E-value=1.1 Score=38.03 Aligned_cols=39 Identities=10% Similarity=-0.082 Sum_probs=30.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc--c---------C---CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL--G---------S---EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~--~---------g---~ad~VV~AaG~~s~~L 65 (200)
+.+++.|++++. .+|++|... . + .||.||+|+|+|+..+
T Consensus 250 ~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 250 RLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp HHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGE
T ss_pred HHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhh
Confidence 778889999987 477776533 1 2 6999999999998876
No 33
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=77.47 E-value=1.1 Score=37.89 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=28.6
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C--CCCEEEEcCCCCc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S--EYNTIFNCTGLGA 62 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g--~ad~VV~AaG~~s 62 (200)
+++++.|++++. .+|+++.... + .||.||+|+|.++
T Consensus 140 ~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 140 AEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEEEeeEEEECCCCcc
Confidence 778888999998 4777775421 2 7999999999998
No 34
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=76.30 E-value=20 Score=30.59 Aligned_cols=84 Identities=10% Similarity=0.006 Sum_probs=47.1
Q ss_pred HHHHHcCcEEEE-Eecccccccc-----------C----CCCEEEEcCCCCcc--cccC-CCCcee--ecceEEEEeCCC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG-----------S----EYNTIFNCTGLGAR--TLCN-DMHVIP--VRGQTIRIKAPH 85 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~-----------g----~ad~VV~AaG~~s~--~L~~-~~pl~p--~rGq~~~~~~~~ 85 (200)
+++++.|++++. .+|++++... + .+|.||.|.|.+|. +.+. ..+-.+ ..+.+..++.+.
T Consensus 115 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~ 194 (499)
T 2qa2_A 115 EWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE 194 (499)
T ss_dssp HHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC
Confidence 778888999988 4777765321 1 58999999999985 3332 222222 223333333221
Q ss_pred -cc--eEEe-cCCeEEEEeCCCCCeEEEcc
Q psy1702 86 -IT--NFYK-NEYDTYIIPNGFDSLVTLGG 111 (200)
Q Consensus 86 -~~--~~i~-~~~~~y~~p~~~~g~~~iG~ 111 (200)
.. .+.. .++.++++|. .++...++.
T Consensus 195 ~~~~~~~~~~~~g~~~~~P~-~~g~~~~~~ 223 (499)
T 2qa2_A 195 ITPRPIGETVPLGMVMSAPL-GDGVDRIIV 223 (499)
T ss_dssp CCCEEEEEEETTEEEEEEEC-SSSCEEEEE
T ss_pred CCcceEEEECCCeEEEEEEc-CCCEEEEEE
Confidence 11 1222 3445677888 666555543
No 35
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=75.71 E-value=14 Score=31.66 Aligned_cols=84 Identities=11% Similarity=0.029 Sum_probs=47.1
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C------CCCEEEEcCCCCcc--cccC-CCCceee--cceEEEEeCCC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S------EYNTIFNCTGLGAR--TLCN-DMHVIPV--RGQTIRIKAPH 85 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g------~ad~VV~AaG~~s~--~L~~-~~pl~p~--rGq~~~~~~~~ 85 (200)
+++++.|++++. .+|++++... + ++|.||.|.|.+|. +.+. ..+-.+. .+.+..++.+.
T Consensus 114 ~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~ 193 (500)
T 2qa1_A 114 QWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE 193 (500)
T ss_dssp HHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC
T ss_pred HHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC
Confidence 778888999988 4777765321 1 58999999999984 2332 2222222 22222232221
Q ss_pred c-c--eEEe-cCCeEEEEeCCCCCeEEEcc
Q psy1702 86 I-T--NFYK-NEYDTYIIPNGFDSLVTLGG 111 (200)
Q Consensus 86 ~-~--~~i~-~~~~~y~~p~~~~g~~~iG~ 111 (200)
. . .+.. ..+.++++|. .++...++.
T Consensus 194 ~~~~~~~~~~~~g~~~~~p~-~~g~~~~~~ 222 (500)
T 2qa1_A 194 LQPRMIGETLPGGMVMVGPL-PGGITRIIV 222 (500)
T ss_dssp CCCEEEEEEETTEEEEEEEE-TTTEEEEEE
T ss_pred CCCceEEEECCCcEEEEEEc-CCCEEEEEE
Confidence 1 1 1222 3445677888 777555543
No 36
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.21 E-value=2.3 Score=30.73 Aligned_cols=38 Identities=11% Similarity=0.208 Sum_probs=29.5
Q ss_pred HHHHHHcCcEEEEEeccccccc---------cC--CCCEEEEcCCCCcc
Q psy1702 26 TVLFKTAGGKVIEKYISSFSEL---------GS--EYNTIFNCTGLGAR 63 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~~V~~l~~~---------~g--~ad~VV~AaG~~s~ 63 (200)
-+.+++.|++++..+|++++.. .+ .+|.||+|+|.++.
T Consensus 63 ~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 63 EAHARRYGAEVRPGVVKGVRDMGGVFEVETEEGVEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHHHHTTCEEEECCCCEEEECSSSEEEECSSCEEEEEEEEECCTTCCH
T ss_pred HHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCCEEEECEEEECCCCCCC
Confidence 3788889999988777776532 12 79999999999874
No 37
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=71.24 E-value=1.4 Score=36.53 Aligned_cols=41 Identities=20% Similarity=0.375 Sum_probs=30.5
Q ss_pred HHHHHcCcEEEE-Eecccccccc---------C---CCCEEEEcCCCCcc-cccC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG---------S---EYNTIFNCTGLGAR-TLCN 67 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~---------g---~ad~VV~AaG~~s~-~L~~ 67 (200)
+.++++|++++. .+|++|.... + .||.||+|+++|.. .|+.
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHHHHHTT
T ss_pred HHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHHHHhcC
Confidence 778889999987 4777765321 2 79999999999864 4543
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=70.79 E-value=2.2 Score=36.02 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=27.9
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC---CCCEEEEcCCCCc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS---EYNTIFNCTGLGA 62 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g---~ad~VV~AaG~~s 62 (200)
+++++.|++++. .+|+++... .+ .||.||+|+|.++
T Consensus 142 ~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 142 TRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 778889999987 467766421 12 6899999999999
No 39
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=70.08 E-value=28 Score=28.71 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHhhCCCCCCCC--CcceeEeecC-CCCC-c-eee---eE--EeCCCeec-----cceee--cHHHHHH
Q psy1702 123 ESTDTESILARTEELLPGVGACG--GGQCWVGLRP-HRYR-V-RVE---CE--QTPGGKVN-----AGVGV--VVGRKKR 185 (200)
Q Consensus 123 ~~~~~~~ll~~~~~~~P~l~~~~--v~~~w~G~Rp-~tpD-~-~i~---~~--~~~~g~~~-----~G~~~--a~~~A~~ 185 (200)
+.+..+.+++.+.+++|...+.. .+..|..-.| ++++ + .+. .. ...+|++. .|.++ +.-.|+.
T Consensus 380 ~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~ 459 (470)
T 3i6d_A 380 DNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKA 459 (470)
T ss_dssp HHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHH
Confidence 35667888889999998643322 4677877664 5666 2 111 10 01134322 33333 4447888
Q ss_pred HHHHHHHH
Q psy1702 186 LTDLLLTF 193 (200)
Q Consensus 186 ~a~li~~~ 193 (200)
+|+.|.+.
T Consensus 460 aA~~i~~~ 467 (470)
T 3i6d_A 460 AVSDALTY 467 (470)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 40
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=67.54 E-value=29 Score=28.30 Aligned_cols=84 Identities=7% Similarity=-0.066 Sum_probs=44.5
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCccc--cc-CC-CCceeecceE---EEEeCC--
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGART--LC-ND-MHVIPVRGQT---IRIKAP-- 84 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~~--L~-~~-~pl~p~rGq~---~~~~~~-- 84 (200)
+++++ ++++. .+|++++.. .+ .+|.||.|.|.+|.- .+ .. .+. ...|+. ..++.+
T Consensus 135 ~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 211 (407)
T 3rp8_A 135 DYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQR-RYAGYVNWNGLVEIDEA 211 (407)
T ss_dssp HHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCC-EEEEEEEEEEEEECCTT
T ss_pred HhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCC-cccCcEEEEEEEecccc
Confidence 44444 67776 467766542 12 799999999999852 22 21 111 111322 222221
Q ss_pred --Ccce--EEe-cCCeEEEEeCCCCCeEEEcccee
Q psy1702 85 --HITN--FYK-NEYDTYIIPNGFDSLVTLGGTQN 114 (200)
Q Consensus 85 --~~~~--~i~-~~~~~y~~p~~~~g~~~iG~t~~ 114 (200)
.... .+. .++.+++.|. .++++.+..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~ 245 (407)
T 3rp8_A 212 LAPGDQWTTFVGEGKQVSLMPV-SAGRFYFFFDVP 245 (407)
T ss_dssp TCCTTEEEEEEETTEEEEEEEE-TTTEEEEEEEEE
T ss_pred cCCCCceEEEECCCcEEEEEEc-CCCeEEEEEEeC
Confidence 1111 222 3456788898 777666655543
No 41
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=67.04 E-value=2.7 Score=35.07 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=28.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----c--------C--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----G--------S--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----~--------g--~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|+++... . + .||.||+|+|.++.
T Consensus 117 ~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 117 SECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVATGGLSM 169 (401)
T ss_dssp HHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEEEECCCCSSC
T ss_pred HHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEEEECCCCccC
Confidence 778889999987 467666422 1 2 79999999999983
No 42
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=66.44 E-value=4.1 Score=34.11 Aligned_cols=37 Identities=24% Similarity=0.421 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEEEec--cccccccCCCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEKYI--SSFSELGSEYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V--~~l~~~~g~ad~VV~AaG~~s~ 63 (200)
+++++.|++++...+ .+++.....+|.||+|.|.++.
T Consensus 130 ~~~~~~Gv~v~~~~v~~~~l~~~~~~ad~VV~AdG~~S~ 168 (430)
T 3ihm_A 130 RALEARGGKFCYDAVSAEDLEGLSEQYDLLVVCTGKYAL 168 (430)
T ss_dssp HHHHHTTCEEEECCCCGGGHHHHHTTSSEEEECCCCTTG
T ss_pred HHHHHcCCEEEEEecchhhhhhhcccCCEEEECCCCcch
Confidence 788889999987543 5554433379999999999874
No 43
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=65.95 E-value=1.8 Score=36.48 Aligned_cols=39 Identities=10% Similarity=0.040 Sum_probs=29.9
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~~L 65 (200)
+.++++|++++. .+|++|... .+ .||.||+|+|+|+..+
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGGGE
T ss_pred HHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcccc
Confidence 777888999987 477776532 12 7999999999998755
No 44
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=65.89 E-value=2.9 Score=36.67 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=28.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|+++... .+ .||.||+|+|.+++
T Consensus 228 ~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 228 ATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 777889999987 467766431 12 69999999999996
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=64.15 E-value=3.2 Score=35.19 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=26.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.++++|++|+. .+|++|... .| .||.||.+++++..
T Consensus 229 ~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 229 KLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred HHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 778889999998 578887543 12 79999999998753
No 46
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=62.66 E-value=2.1 Score=35.45 Aligned_cols=37 Identities=11% Similarity=0.260 Sum_probs=28.5
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------~g---~ad~VV~AaG~~s~ 63 (200)
+.++++|++|+. .+|++|+.. .+ .||.||+|+|++..
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHH
Confidence 677788999987 478777542 12 79999999999853
No 47
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=62.33 E-value=4 Score=32.37 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=34.8
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC--CCCEEEEcCCCCcccccCCCC-ceeecceEEE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS--EYNTIFNCTGLGARTLCNDMH-VIPVRGQTIR 80 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g--~ad~VV~AaG~~s~~L~~~~p-l~p~rGq~~~ 80 (200)
+.+++.|++++. .+|++++.. .+ .+|.||+|+|.++......+| +....|..+.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~ 151 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLH 151 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEE
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEE
Confidence 677888999877 467665421 12 799999999998876443333 3334455443
No 48
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=62.07 E-value=4.3 Score=33.18 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=30.0
Q ss_pred HHHHHcCcEEEE-Eecccccccc-CCCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSELG-SEYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~~-g~ad~VV~AaG~~s~ 63 (200)
+++++.|++++. .+|++++... ..+|.||.|.|.+|.
T Consensus 106 ~~~~~~gv~i~~~~~v~~i~~~~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 106 DKCRSQGIAIRFESPLLEHGELPLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHTTCEEETTCCCCSGGGCCGGGCSEEEECCGGGGG
T ss_pred HHHHHCCCEEEeCCEeccchhcccccCCEEEECCCCCch
Confidence 778888999987 4788886532 279999999999985
No 49
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=61.54 E-value=4.8 Score=34.53 Aligned_cols=38 Identities=11% Similarity=-0.053 Sum_probs=28.4
Q ss_pred HHHHHHcCcEEEE-Eeccccccc-c-----------C-----CCC-EEEEcCCCCcc
Q psy1702 26 TVLFKTAGGKVIE-KYISSFSEL-G-----------S-----EYN-TIFNCTGLGAR 63 (200)
Q Consensus 26 ~~~~~~~Gv~~~~-~~V~~l~~~-~-----------g-----~ad-~VV~AaG~~s~ 63 (200)
-++++++|++++. .+|++|... . + .|+ .||+|+|.|+.
T Consensus 209 ~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 209 VETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 3788889999997 577766432 1 1 685 99999999984
No 50
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=60.92 E-value=5.2 Score=34.43 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=29.5
Q ss_pred HHHHH-cCcEEEEEeccccccc-----------cC---CCCEEEEcCCCCcccc
Q psy1702 27 VLFKT-AGGKVIEKYISSFSEL-----------GS---EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~-~Gv~~~~~~V~~l~~~-----------~g---~ad~VV~AaG~~s~~L 65 (200)
+.+++ .|++++..+|++++.. .| .+|.||.|+|.+|..+
T Consensus 183 ~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 183 EHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp HHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCC
T ss_pred HHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHH
Confidence 77777 8999988667666421 12 7999999999998653
No 51
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=60.13 E-value=3.3 Score=33.99 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=35.9
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC---CCCEEEEcCCCCccc-ccCCCCceeecceEEEEeC
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS---EYNTIFNCTGLGART-LCNDMHVIPVRGQTIRIKA 83 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g---~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~~~~~~ 83 (200)
+.+++.|++++.. +|++++.. .+ .+|.||+|+|.+... ++....+.-.+| +.++.
T Consensus 195 ~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g--i~vd~ 263 (384)
T 2v3a_A 195 AGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG--IVVDR 263 (384)
T ss_dssp HHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS--EEECT
T ss_pred HHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC--EEECC
Confidence 6778899999984 67666431 12 799999999998764 543223332367 44543
No 52
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=57.89 E-value=3.7 Score=34.43 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=27.2
Q ss_pred HHHHHcCcEEEEEeccccccc-------cC---CCCEEEEcCCCC
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL-------GS---EYNTIFNCTGLG 61 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~-------~g---~ad~VV~AaG~~ 61 (200)
+.+++.|+++++++|++|+.. .| .+|.+|+|+|..
T Consensus 64 ~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 64 PLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCE
T ss_pred HHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCC
Confidence 446678999998888887643 13 799999999964
No 53
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=56.28 E-value=8.4 Score=33.52 Aligned_cols=37 Identities=8% Similarity=-0.223 Sum_probs=27.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~ 63 (200)
+++++.|++++. .+|++|... .+ .||.||+|+|.++.
T Consensus 263 ~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 263 DNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 778889999987 466655321 12 58999999999875
No 54
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=55.96 E-value=4.4 Score=33.50 Aligned_cols=55 Identities=9% Similarity=0.062 Sum_probs=35.2
Q ss_pred HHHHHcCcEEEEE-eccccccc----------cC---CCCEEEEcCCCCccc-ccCCCCceeecceEEEEeC
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL----------GS---EYNTIFNCTGLGART-LCNDMHVIPVRGQTIRIKA 83 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~----------~g---~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~~~~~~ 83 (200)
+.+++.|++++.. +|.+++.. .| .+|.||+|+|..... ++....+...+| +.++.
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G--i~vd~ 261 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG--IIVDQ 261 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS--EEECT
T ss_pred HHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC--EEECC
Confidence 6778899999874 56655431 13 799999999987654 443223333366 44543
No 55
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=51.97 E-value=7.5 Score=33.82 Aligned_cols=37 Identities=11% Similarity=-0.076 Sum_probs=27.5
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~ 63 (200)
+++++.|++++. .+|++|... .+ .||.||+|+|.++.
T Consensus 258 ~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 258 KAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 778889999987 466655311 12 57999999999985
No 56
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=51.82 E-value=6.8 Score=33.59 Aligned_cols=86 Identities=16% Similarity=0.106 Sum_probs=48.3
Q ss_pred HHHHHcCcEEEEE-eccccccc------------cC-----CCCEEEEcCCCCcccc--cCCCCceee-cceEE---EEe
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL------------GS-----EYNTIFNCTGLGARTL--CNDMHVIPV-RGQTI---RIK 82 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~------------~g-----~ad~VV~AaG~~s~~L--~~~~pl~p~-rGq~~---~~~ 82 (200)
+.+++.|++++.. +|+++... .| .+|.||.|+|.+|.-. +. .+..+. -++.. .++
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg-~~~~~~~~~~~a~~~~~~ 197 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVG-ERVYSRFFQNVALYGYFE 197 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTC-CEEECSTTCEEEEEEEEE
T ss_pred HHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcC-CCccCchhcceEEEEEec
Confidence 7788899999873 66655321 12 5899999999998532 21 111110 11221 222
Q ss_pred C----C--Ccce-E--EecCCeEEEEeCCCCCeEEEcccee
Q psy1702 83 A----P--HITN-F--YKNEYDTYIIPNGFDSLVTLGGTQN 114 (200)
Q Consensus 83 ~----~--~~~~-~--i~~~~~~y~~p~~~~g~~~iG~t~~ 114 (200)
. + .... . ....+++|++|. .++++.+|-...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~G~~~~~Pl-~~~~~~vg~~~~ 237 (512)
T 3e1t_A 198 NGKRLPAPRQGNILSAAFQDGWFWYIPL-SDTLTSVGAVVS 237 (512)
T ss_dssp SCCCCSTTCTTSEEEEEETTEEEEEEEC-SSSEEEEEEEEE
T ss_pred CCccCCCCCcCceEEEEeCCceEEEEEe-CCCeEEEEEEec
Confidence 1 1 1111 1 124567889998 777677776654
No 57
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=51.75 E-value=5.4 Score=31.13 Aligned_cols=52 Identities=6% Similarity=0.093 Sum_probs=33.3
Q ss_pred CCceecChhhhhH-hHHHHHHcCcEEEEEeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-YTVLFKTAGGKVIEKYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~Gv~~~~~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
+++..+...++-. +-+.+++.|++++..+|.+++.. .+ .+|.||+|+|.+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 62 LGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp TTSTTEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 3443333344333 23777888999988667766432 12 78999999998743
No 58
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=51.58 E-value=11 Score=32.97 Aligned_cols=37 Identities=11% Similarity=-0.016 Sum_probs=27.3
Q ss_pred HHHHHcCcEEEE-Eecccccc-c------------cC-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE-L------------GS-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~-~------------~g-----~ad~VV~AaG~~s~ 63 (200)
+++++.|++++. .+|++|.. . .+ .||.||+|+|.++.
T Consensus 263 ~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 263 DNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 788889999987 46666521 1 12 58999999999875
No 59
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=51.53 E-value=8.1 Score=31.63 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=28.8
Q ss_pred HHHHHcCcEEEEEecccccccc-------C---CCCEEEEcCCCCc
Q psy1702 27 VLFKTAGGKVIEKYISSFSELG-------S---EYNTIFNCTGLGA 62 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~~-------g---~ad~VV~AaG~~s 62 (200)
+.+.+.|+++++.+|++|+... + .+|.+|+|+|...
T Consensus 63 ~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 63 DGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCcc
Confidence 7778899999988888876431 2 7999999999753
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=51.11 E-value=7.8 Score=34.79 Aligned_cols=37 Identities=3% Similarity=-0.028 Sum_probs=27.2
Q ss_pred HHHHH-cCcEEEEEeccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKT-AGGKVIEKYISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~-~Gv~~~~~~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++ .|+++++.+|+.+... .| .||.||+|+|.|+.
T Consensus 132 e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 132 TALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 66676 5999977777776421 12 68899999999864
No 61
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=50.54 E-value=5.4 Score=34.11 Aligned_cols=55 Identities=4% Similarity=-0.054 Sum_probs=35.7
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC---CCCEEEEcCCCCccc-ccC--CCCc--eeecceEEEEe
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS---EYNTIFNCTGLGART-LCN--DMHV--IPVRGQTIRIK 82 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g---~ad~VV~AaG~~s~~-L~~--~~pl--~p~rGq~~~~~ 82 (200)
++++++|++++.. .|.+++.. .+ .+|.||+|+|.+... |+. .+.+ .+ +|.+.+++
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~-~g~i~~vd 337 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRR-GYYSPVLD 337 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEET-TEEEECCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccC-Cceeeccc
Confidence 7788899999984 56555321 12 799999999998764 543 2222 23 66654343
No 62
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=49.10 E-value=8.5 Score=30.82 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=27.0
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g--~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++.. +|++++.. .+ .+|.||+|+|.++.
T Consensus 96 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 96 VVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTS
T ss_pred HHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCc
Confidence 5667789998874 67665432 12 68999999999864
No 63
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=49.07 E-value=63 Score=26.76 Aligned_cols=157 Identities=10% Similarity=-0.038 Sum_probs=80.3
Q ss_pred cEEEE-Eeccccccc---------cC--CCCEEEEcCCCCc-ccccCC--------CCceeecceEEEEeCCCcceEEec
Q psy1702 34 GKVIE-KYISSFSEL---------GS--EYNTIFNCTGLGA-RTLCND--------MHVIPVRGQTIRIKAPHITNFYKN 92 (200)
Q Consensus 34 v~~~~-~~V~~l~~~---------~g--~ad~VV~AaG~~s-~~L~~~--------~pl~p~rGq~~~~~~~~~~~~i~~ 92 (200)
++|+. .+|++|+.. .| .||+||+|++++. ..|+.+ ++..|+...++.++.+. ... .
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~ad~vV~a~p~~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~~--~ 325 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHGPEYADYVLLTIPHPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQ-SLP--I 325 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTCCEEESEEEECSCHHHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCS-SCS--S
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCCeEECCEEEECCCHHHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcC-CCC--C
Confidence 57776 468877542 12 7999999999987 445433 45566666666666542 100 0
Q ss_pred CCeEEEEeCCCCC-------------------eEEEccceecCC---CCCCCChHHHHHHHHHHHhhCCCCCCC--CCcc
Q psy1702 93 EYDTYIIPNGFDS-------------------LVTLGGTQNFGH---VNRCVESTDTESILARTEELLPGVGAC--GGGQ 148 (200)
Q Consensus 93 ~~~~y~~p~~~~g-------------------~~~iG~t~~~~~---~~~~~~~~~~~~ll~~~~~~~P~l~~~--~v~~ 148 (200)
++..|+.|. .++ ..++.+...... .....+.+..+.+++.+.++++.-... ..+.
T Consensus 326 ~g~g~l~~~-~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~ 404 (475)
T 3lov_A 326 EGTGFVVNR-RAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIIS 404 (475)
T ss_dssp SSSEEEECT-TSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEE
T ss_pred CCEEEEecC-CCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEE
Confidence 011233322 111 233333221111 112223456777888888888743211 2356
Q ss_pred eeEeecC-CCCC-c-ee---eeE--EeCCCeec-----c--ceeecHHHHHHHHHHHHHHh
Q psy1702 149 CWVGLRP-HRYR-V-RV---ECE--QTPGGKVN-----A--GVGVVVGRKKRLTDLLLTFN 194 (200)
Q Consensus 149 ~w~G~Rp-~tpD-~-~i---~~~--~~~~g~~~-----~--G~~~a~~~A~~~a~li~~~~ 194 (200)
.|..-.| ++++ + .+ ... ...+|++. . |+.-+...|+.+|+.|.+..
T Consensus 405 ~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 405 RLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp EEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSHHHHHHHHHHHHHHHHHTC
T ss_pred EcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 7777655 5666 2 11 110 01234443 2 23233447888888877653
No 64
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=49.07 E-value=7.6 Score=33.36 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=27.9
Q ss_pred HHHHHcCcEEEE-Eeccccccc-c----------------C--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-G----------------S--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-~----------------g--~ad~VV~AaG~~s~ 63 (200)
++++++|++++. .+|++++.. . . .||.||.|.|.+|.
T Consensus 128 ~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 128 AQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp HHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcch
Confidence 778888999987 467666421 0 1 68999999999983
No 65
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=48.31 E-value=7.2 Score=30.68 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=32.2
Q ss_pred CCceecChhhhhH-hHHHHHHcCcEEEEEeccccccc--------cC---CCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-YTVLFKTAGGKVIEKYISSFSEL--------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~Gv~~~~~~V~~l~~~--------~g---~ad~VV~AaG~~s~ 63 (200)
++|..+...++.. +-+.+++.|++++..+|.+++.. .+ .+|.||+|+|.++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 64 LGFKSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp TTBSSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEESSSEEEEEEEEECCCEEEC
T ss_pred CCCcccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEECCCEEEeCEEEECCCCCcc
Confidence 4443333344433 33677788999876566655421 11 78999999998654
No 66
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=48.29 E-value=12 Score=33.57 Aligned_cols=37 Identities=5% Similarity=-0.062 Sum_probs=26.9
Q ss_pred HHHHH-cCcEEEEEeccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKT-AGGKVIEKYISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~-~Gv~~~~~~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++ .|+++++.+|+++... .| .|+.||+|+|.++.
T Consensus 131 ~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 131 KVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp HHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred HHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 66776 5999977677766421 12 78999999998754
No 67
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=48.28 E-value=11 Score=31.04 Aligned_cols=38 Identities=5% Similarity=0.025 Sum_probs=28.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g---~ad~VV~AaG~~s~~ 64 (200)
+.++++|++++. .+|++++.. .+ .+|.||+|+|.....
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred HHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 677889999997 356655421 12 799999999988653
No 68
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=48.23 E-value=7.9 Score=33.49 Aligned_cols=33 Identities=6% Similarity=0.017 Sum_probs=25.8
Q ss_pred CCCEEEEcCCCCcccccCCCC-ceeecceEEEEe
Q psy1702 50 EYNTIFNCTGLGARTLCNDMH-VIPVRGQTIRIK 82 (200)
Q Consensus 50 ~ad~VV~AaG~~s~~L~~~~p-l~p~rGq~~~~~ 82 (200)
.||.||+|+|.++.....++| +.+.+|+++.+.
T Consensus 142 ~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs~ 175 (542)
T 1w4x_A 142 RARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTG 175 (542)
T ss_dssp EEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEGG
T ss_pred EeCEEEECcCCCCCCCCCCCCCcccCCCceEECC
Confidence 799999999999876655555 667789877654
No 69
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=47.83 E-value=3.5 Score=34.05 Aligned_cols=52 Identities=10% Similarity=0.091 Sum_probs=36.5
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----cC---CCCEEEEcCCCCcccccCCC--CceeecceE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----GS---EYNTIFNCTGLGARTLCNDM--HVIPVRGQT 78 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----~g---~ad~VV~AaG~~s~~L~~~~--pl~p~rGq~ 78 (200)
+.+++.|++++. .+|++++.. .+ .+|.||+|+|.....++.+. .+...+|.+
T Consensus 226 ~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i 288 (409)
T 3h8l_A 226 SIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFI 288 (409)
T ss_dssp HHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCB
T ss_pred HHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCE
Confidence 777889999998 467766542 23 79999999998877665443 554455544
No 70
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=47.43 E-value=14 Score=32.41 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=28.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc--------------cC-----CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL--------------GS-----EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~--------------~g-----~ad~VV~AaG~~s~~L 65 (200)
+++++.|++++. ..|++|... .+ .|+.||+|+|.++...
T Consensus 151 ~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 151 QQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred HHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 778888999998 466665321 12 5889999999998654
No 71
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=47.12 E-value=9.6 Score=31.82 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=28.4
Q ss_pred HHHHHcCcEEEEEeccccccc-------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL-------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~-------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++..+|++++.. .+ .+|.||+|+|....
T Consensus 67 ~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 67 HYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp HHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred HHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 677788999987777776542 12 79999999998654
No 72
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=47.11 E-value=11 Score=30.50 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=27.9
Q ss_pred HHHHHcCcEEEE-Eecccccc------ccC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE------LGS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~------~~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++++. ..+ .+|.||.|.|.+|.
T Consensus 115 ~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 115 NRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccHH
Confidence 777888999987 35665542 122 79999999999985
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=46.78 E-value=7.2 Score=30.81 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEEEeccccccc--------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL--------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~--------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++..+|.+++.. .+ .+|.||+|+|.++..
T Consensus 78 ~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 78 KQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp HHHHHTTCEEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEEECC
T ss_pred HHHHHCCCEEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCCcCC
Confidence 677888999987667766431 12 789999999988543
No 74
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=46.72 E-value=9.8 Score=34.08 Aligned_cols=38 Identities=5% Similarity=0.012 Sum_probs=27.0
Q ss_pred HHHHHc-CcEEEEEeccccccc----------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTA-GGKVIEKYISSFSEL----------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~-Gv~~~~~~V~~l~~~----------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++. |+++++..|+.+... .| .||.||+|+|.|++.
T Consensus 125 ~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 125 RIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp HHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred HHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 666664 999987677665421 12 689999999998653
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=45.20 E-value=16 Score=27.99 Aligned_cols=52 Identities=8% Similarity=-0.002 Sum_probs=32.3
Q ss_pred CCceecChhhhhH-hHHHHHHc-CcEEEEEeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-YTVLFKTA-GGKVIEKYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~-Gv~~~~~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
+++..+...++-. +-+.+++. +++++..+|++++.. .+ .+|.||+|+|....
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 48 LGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 3333333444333 23666666 788877777766532 12 69999999998643
No 76
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=44.24 E-value=16 Score=32.75 Aligned_cols=39 Identities=13% Similarity=-0.035 Sum_probs=28.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~~L 65 (200)
+++++.|++++. ..|++|... .+ .|+.||+|+|.++...
T Consensus 166 ~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y 223 (660)
T 2bs2_A 166 NECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIY 223 (660)
T ss_dssp HHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGS
T ss_pred HHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhc
Confidence 777888999987 466655311 12 5899999999998653
No 77
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=43.33 E-value=7.1 Score=30.62 Aligned_cols=52 Identities=10% Similarity=0.014 Sum_probs=32.6
Q ss_pred HHHHH-cCcEEEE-Eeccccccc-------------------c------C--CCCEEEEcCCCCcc------ccc---C-
Q psy1702 27 VLFKT-AGGKVIE-KYISSFSEL-------------------G------S--EYNTIFNCTGLGAR------TLC---N- 67 (200)
Q Consensus 27 ~~~~~-~Gv~~~~-~~V~~l~~~-------------------~------g--~ad~VV~AaG~~s~------~L~---~- 67 (200)
+++.+ .|++++. .+|+++... . . .+|.||+|+|..+. .++ .
T Consensus 127 ~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~ 206 (284)
T 1rp0_A 127 SKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGM 206 (284)
T ss_dssp HHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTS
T ss_pred HHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccC
Confidence 56655 6999987 466554310 0 1 68999999995443 332 1
Q ss_pred CCCceeecceE
Q psy1702 68 DMHVIPVRGQT 78 (200)
Q Consensus 68 ~~pl~p~rGq~ 78 (200)
.+++.|.+|..
T Consensus 207 ~~~v~~~~g~~ 217 (284)
T 1rp0_A 207 IDHVPGMKALD 217 (284)
T ss_dssp SSCCCCCEEEC
T ss_pred CCCcCCcCCch
Confidence 35777887743
No 78
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=41.52 E-value=15 Score=32.52 Aligned_cols=39 Identities=10% Similarity=-0.120 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~~L 65 (200)
+++++.|++++. ..|++|... .+ .|+.||+|+|.++...
T Consensus 163 ~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y 220 (621)
T 2h88_A 163 GRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTY 220 (621)
T ss_dssp HHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred HHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccccc
Confidence 777788999988 466655321 12 5899999999998743
No 79
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=41.34 E-value=8.8 Score=33.41 Aligned_cols=53 Identities=9% Similarity=0.173 Sum_probs=35.1
Q ss_pred HHHHHcCcEEEE---Eeccccccc-----cC--CCCEEEEcCCCCcc-cccCCCCceeecceEE
Q psy1702 27 VLFKTAGGKVIE---KYISSFSEL-----GS--EYNTIFNCTGLGAR-TLCNDMHVIPVRGQTI 79 (200)
Q Consensus 27 ~~~~~~Gv~~~~---~~V~~l~~~-----~g--~ad~VV~AaG~~s~-~L~~~~pl~p~rGq~~ 79 (200)
+++.+.+|+++. ..|..+... .| ++|.||+|+|.-+. ..+..+++....|..+
T Consensus 346 ~al~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l 409 (545)
T 3uox_A 346 ETYNRDNVHLVDIREAPIQEVTPEGIKTADAAYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRL 409 (545)
T ss_dssp HHTTSTTEEEEETTTSCEEEEETTEEEESSCEEECSEEEECCCCBSSSCSCTTSEEECGGGCBH
T ss_pred HHhcCCCEEEEecCCCCceEEccCeEEeCCCeeecCEEEECCccccccccCCCceEECCCCccH
Confidence 566677999984 456655432 23 89999999999753 3344556666666554
No 80
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=40.22 E-value=9.1 Score=32.22 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=27.8
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g--~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++++.. .+ .+|.||+|+|.+..
T Consensus 224 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 224 AAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHTTCEEETTCCEEEEEEETTEEEEEETTEEEEESEEEECSCEEES
T ss_pred HHHHhCCCEEEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECCCCCcC
Confidence 778889999987 366665421 11 79999999999865
No 81
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=39.94 E-value=20 Score=30.34 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=27.7
Q ss_pred HHHHHcCcEEEEE-eccccccc------------cC--CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL------------GS--EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~------------~g--~ad~VV~AaG~~s~~L 65 (200)
+++++.|++++.. .| ++... .+ .+|.||+|+|.++...
T Consensus 127 ~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 127 KLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGS
T ss_pred HHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccC
Confidence 6677789999874 57 66321 12 6899999999998643
No 82
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=38.77 E-value=18 Score=29.79 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=27.4
Q ss_pred HHHHHHcCcEEEEE-eccccccc-------cC---CCCEEEEcCCC
Q psy1702 26 TVLFKTAGGKVIEK-YISSFSEL-------GS---EYNTIFNCTGL 60 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~-~V~~l~~~-------~g---~ad~VV~AaG~ 60 (200)
.+.+++.|++++.. +|++++.. .+ .+|.+|+|+|.
T Consensus 69 ~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 69 NDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCC
Confidence 37788899999874 78877542 12 79999999996
No 83
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=38.74 E-value=8.8 Score=32.99 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=25.4
Q ss_pred HHHHHcCcEEEE-Eecccccc-c----------cC---CCCEEEEcCCCC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE-L----------GS---EYNTIFNCTGLG 61 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~-~----------~g---~ad~VV~AaG~~ 61 (200)
+.++++|++++. .+|++|.. . .| .||.||+|++.+
T Consensus 264 r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 264 RMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 888999999987 46776643 1 12 689999999998
No 84
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=38.06 E-value=14 Score=31.05 Aligned_cols=37 Identities=5% Similarity=0.036 Sum_probs=28.1
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++.. +|.+++.. .+ .+|.||+|+|.+..
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred HHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 7788899999874 66666431 12 79999999999865
No 85
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=38.02 E-value=11 Score=32.17 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=28.4
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++.. +|++++.. .+ .+|.||+|+|.+.+.
T Consensus 231 ~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 231 ESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 7788899999873 66665432 12 799999999998764
No 86
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=37.70 E-value=5.9 Score=34.48 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=33.3
Q ss_pred HHHHcCcEEE---EEeccccccc-----cC---CCCEEEEcCCCCccc-ccCCCCceeecceEE
Q psy1702 28 LFKTAGGKVI---EKYISSFSEL-----GS---EYNTIFNCTGLGART-LCNDMHVIPVRGQTI 79 (200)
Q Consensus 28 ~~~~~Gv~~~---~~~V~~l~~~-----~g---~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~~ 79 (200)
++.+.+++++ ...|..+... .| ++|.||+|+|.-+.. .+..+++....|..+
T Consensus 339 ~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l 402 (540)
T 3gwf_A 339 VYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHI 402 (540)
T ss_dssp GGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBH
T ss_pred HhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCH
Confidence 3446689998 3456555432 23 799999999998765 344455655555443
No 87
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=36.56 E-value=9.3 Score=29.80 Aligned_cols=38 Identities=16% Similarity=0.047 Sum_probs=26.6
Q ss_pred HHHHHHcCcEEEEEeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 26 TVLFKTAGGKVIEKYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
-+.+++.|++++..+|.+++.. .+ .+|.||+|+|.++.
T Consensus 66 ~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 66 QEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 3667778999887566655321 12 78999999997654
No 88
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=35.90 E-value=24 Score=31.08 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=27.7
Q ss_pred HHHHHcC-cEEEE-Eeccccccc-------------cC-----CCCEEEEcCCCCcccc
Q psy1702 27 VLFKTAG-GKVIE-KYISSFSEL-------------GS-----EYNTIFNCTGLGARTL 65 (200)
Q Consensus 27 ~~~~~~G-v~~~~-~~V~~l~~~-------------~g-----~ad~VV~AaG~~s~~L 65 (200)
+++++.| ++++. ..|++|... .+ .|+.||+|+|.++...
T Consensus 142 ~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 142 QTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred HHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 6777788 99987 456554311 12 6899999999998753
No 89
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=34.93 E-value=17 Score=28.59 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=27.3
Q ss_pred HHHHHHcCcEEEEEeccccccc------------cC---CCCEEEEcCCCCcc
Q psy1702 26 TVLFKTAGGKVIEKYISSFSEL------------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~~V~~l~~~------------~g---~ad~VV~AaG~~s~ 63 (200)
-+.+++.|++++..+|.+++.. .+ .+|.||+|+|.+..
T Consensus 72 ~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 72 HQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 3778888999987666654321 12 68999999998654
No 90
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=34.93 E-value=32 Score=29.31 Aligned_cols=37 Identities=8% Similarity=0.048 Sum_probs=27.1
Q ss_pred HHHHHcCcEEEE-Eecccccc--------------c-cC-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE--------------L-GS-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~--------------~-~g-----~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++++. . .| .+|.||+|+|..+.
T Consensus 174 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 174 KVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 777788999987 36665532 1 12 78999999999874
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=34.93 E-value=5.9 Score=34.53 Aligned_cols=52 Identities=19% Similarity=0.341 Sum_probs=33.2
Q ss_pred HHHHHcCcEEE---EEeccccccc-----cC--CCCEEEEcCCCCccc-ccCCCCceeecceE
Q psy1702 27 VLFKTAGGKVI---EKYISSFSEL-----GS--EYNTIFNCTGLGART-LCNDMHVIPVRGQT 78 (200)
Q Consensus 27 ~~~~~~Gv~~~---~~~V~~l~~~-----~g--~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~ 78 (200)
+++.+.+|+++ ...|..+... .| ++|.||+|+|.-+.. .+..+++.-..|..
T Consensus 351 ~al~~~~V~lvd~~~~~I~~it~~gv~~~dG~~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~ 413 (549)
T 4ap3_A 351 ETYNRDNVELVDLRSTPIVGMDETGIVTTGAHYDLDMIVLATGFDAMTGSLDKLEIVGRGGRT 413 (549)
T ss_dssp GGGGSTTEEEEETTTSCEEEEETTEEEESSCEEECSEEEECCCEEESSTTGGGSEEECGGGCB
T ss_pred HHhcCCCEEEEeCCCCCceEEeCCcEEeCCCceecCEEEECCcccccccccCceeEECCCCcC
Confidence 45566689998 4455555432 23 899999999987664 44445555555543
No 92
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=33.64 E-value=28 Score=28.11 Aligned_cols=37 Identities=14% Similarity=0.249 Sum_probs=26.7
Q ss_pred HHHHHcCcEEEE-Eeccccccc-----------cC-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-----------GS-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-----------~g-----~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++++.. .| .+|.||.|.|.+|.
T Consensus 111 ~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 111 EAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 667778999887 356555321 12 68999999999986
No 93
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=33.45 E-value=30 Score=29.90 Aligned_cols=55 Identities=15% Similarity=0.068 Sum_probs=34.3
Q ss_pred HHHHHcCc--EEEE-Eeccccccc-----------cC---CCCEEEEcCCCCcccccCCCC-ceeecceEEEE
Q psy1702 27 VLFKTAGG--KVIE-KYISSFSEL-----------GS---EYNTIFNCTGLGARTLCNDMH-VIPVRGQTIRI 81 (200)
Q Consensus 27 ~~~~~~Gv--~~~~-~~V~~l~~~-----------~g---~ad~VV~AaG~~s~~L~~~~p-l~p~rGq~~~~ 81 (200)
+.+++.|+ .++. .+|++++.. .| .+|.||+|+|.++.....++| +...+|..+.+
T Consensus 95 ~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 167 (540)
T 3gwf_A 95 DVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHT 167 (540)
T ss_dssp HHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEe
Confidence 66677787 6665 456655321 12 699999999998765544333 33445665554
No 94
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=32.87 E-value=16 Score=29.77 Aligned_cols=84 Identities=10% Similarity=-0.021 Sum_probs=46.0
Q ss_pred HHHHHc-CcEEEE-Eecccccc-----------ccC---CCCEEEEcCCCCcc--cccC-CC-Cceeecce--EEEEeC-
Q psy1702 27 VLFKTA-GGKVIE-KYISSFSE-----------LGS---EYNTIFNCTGLGAR--TLCN-DM-HVIPVRGQ--TIRIKA- 83 (200)
Q Consensus 27 ~~~~~~-Gv~~~~-~~V~~l~~-----------~~g---~ad~VV~AaG~~s~--~L~~-~~-pl~p~rGq--~~~~~~- 83 (200)
+++++. |++++. .+|++++. ..| .+|.||.|.|.+|. +.+. .. +..|..++ ....-.
T Consensus 115 ~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~ 194 (399)
T 2x3n_A 115 EKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALA 194 (399)
T ss_dssp HHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECC
T ss_pred HHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEe
Confidence 677777 999987 46665532 112 78999999999986 2222 11 12224455 332211
Q ss_pred C--C-cceEEe-c-CCeEEEEeCCCCCeEEEcc
Q psy1702 84 P--H-ITNFYK-N-EYDTYIIPNGFDSLVTLGG 111 (200)
Q Consensus 84 ~--~-~~~~i~-~-~~~~y~~p~~~~g~~~iG~ 111 (200)
+ . ...... . ++.++++|. .++++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 226 (399)
T 2x3n_A 195 PCVAERNRLYVDSQGGLAYFYPI-GFDRARLVV 226 (399)
T ss_dssp HHHHHCEEEEECTTSCEEEEEEE-TTTEEEEEE
T ss_pred cCCCCCccEEEcCCCcEEEEEEc-CCCEEEEEE
Confidence 1 0 011222 3 556778887 666555544
No 95
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=32.78 E-value=17 Score=29.94 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=28.8
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCccc-cc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGART-LC 66 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~~-L~ 66 (200)
+.+++.|++++. .+|.+++.. .| .+|.||+|+|...+. ++
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~ 246 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLA 246 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred HHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHH
Confidence 677888999986 356655432 12 799999999988663 44
No 96
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=32.37 E-value=15 Score=30.80 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++. .+|++++.. .+ .+|.||+|+|...+.
T Consensus 216 ~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 216 RVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 777888999987 366665431 12 799999999988654
No 97
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=32.11 E-value=32 Score=26.71 Aligned_cols=52 Identities=8% Similarity=0.009 Sum_probs=32.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc------------c--C---CCCEEEEcCCCCcc-cccCCCCceeecceE
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL------------G--S---EYNTIFNCTGLGAR-TLCNDMHVIPVRGQT 78 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~------------~--g---~ad~VV~AaG~~s~-~L~~~~pl~p~rGq~ 78 (200)
+++++.|++++. ..|..+... . + .+|.||+|+|.-.. .++....+.-.+|.+
T Consensus 197 ~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i 267 (332)
T 3lzw_A 197 ENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSI 267 (332)
T ss_dssp HHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEE
T ss_pred HHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeE
Confidence 668889999987 455554321 1 1 68999999997653 344433333345654
No 98
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=31.30 E-value=24 Score=29.03 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=33.7
Q ss_pred HHHHHcCcEEEEE-eccccccccCCCCEEEEcCCCCcc-cccCCCCceeecceEEEEe
Q psy1702 27 VLFKTAGGKVIEK-YISSFSELGSEYNTIFNCTGLGAR-TLCNDMHVIPVRGQTIRIK 82 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~~g~ad~VV~AaG~~s~-~L~~~~pl~p~rGq~~~~~ 82 (200)
+.+++.|++++.. .|.++.... .+|.||+|+|.-.. .++....+...+| +.++
T Consensus 196 ~~l~~~gV~~~~~~~v~~ig~~~-~~D~vv~a~G~~p~~~~~~~~gl~~~~g--i~vd 250 (385)
T 3klj_A 196 DKLDRLGIKIYTNSNFEEMGDLI-RSSCVITAVGVKPNLDFIKDTEIASKRG--ILVN 250 (385)
T ss_dssp HHHHTTTCEEECSCCGGGCHHHH-HHSEEEECCCEEECCGGGTTSCCCBSSS--EEEC
T ss_pred HHHHhCCCEEEeCCEEEEcCeEE-ecCeEEECcCcccChhhhhhcCCCcCCC--EEEC
Confidence 6677788888873 666651111 79999999998654 4554444444466 4444
No 99
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=31.21 E-value=33 Score=30.60 Aligned_cols=37 Identities=11% Similarity=0.011 Sum_probs=27.4
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.++++|++++. .+|++++.. .+ .+|.||+|+|....
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 778889999998 467766432 11 69999999997643
No 100
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=29.69 E-value=17 Score=28.35 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=27.2
Q ss_pred HHHHHcCcEEEEEeccccccc------------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL------------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~------------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++...|.+++.. .+ .+|.||+|+|....
T Consensus 92 ~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 92 EQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 778888999987666665431 11 78999999998543
No 101
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=28.91 E-value=8.7 Score=33.22 Aligned_cols=53 Identities=15% Similarity=0.246 Sum_probs=34.3
Q ss_pred HHHHHcCcEEE---EEecccccccc-----C--CCCEEEEcCCCCcc-cccCCCCceeecceEE
Q psy1702 27 VLFKTAGGKVI---EKYISSFSELG-----S--EYNTIFNCTGLGAR-TLCNDMHVIPVRGQTI 79 (200)
Q Consensus 27 ~~~~~~Gv~~~---~~~V~~l~~~~-----g--~ad~VV~AaG~~s~-~L~~~~pl~p~rGq~~ 79 (200)
.++.+.+|+++ ...|.++.... . ++|.||.|+|..+. .++..++|....|..+
T Consensus 346 ~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l 409 (542)
T 1w4x_A 346 EMFNRDNVHLVDTLSAPIETITPRGVRTSEREYELDSLVLATGFDALTGALFKIDIRGVGNVAL 409 (542)
T ss_dssp HHTTSTTEEEEETTTSCEEEECSSEEEESSCEEECSEEEECCCCCCTTHHHHTSEEECGGGCBH
T ss_pred HHhCCCCEEEEecCCCCceEEcCCeEEeCCeEEecCEEEEcCCccccccCcCceeeECCCCCCH
Confidence 55566678887 33455544311 2 79999999999973 4544566666667654
No 102
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=28.68 E-value=23 Score=29.95 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=27.6
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|.+++.. .+ .+|.||+|+|....
T Consensus 240 ~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 240 DAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 677888999987 467666432 12 79999999998654
No 103
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=27.25 E-value=35 Score=26.40 Aligned_cols=37 Identities=5% Similarity=0.051 Sum_probs=24.1
Q ss_pred HHHHHcCcEEEE-Eeccccccc----------c----C-----CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL----------G----S-----EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~----------~----g-----~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|.++... . + .+|.||+|+|.-..
T Consensus 192 ~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 192 DKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 556678999986 355444211 0 2 68999999997644
No 104
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=27.01 E-value=20 Score=30.21 Aligned_cols=37 Identities=8% Similarity=-0.126 Sum_probs=26.6
Q ss_pred HHHHHcC-cEEEE-Eeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAG-GKVIE-KYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~G-v~~~~-~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.| ++++. .+|++|+.. .+ .||+||+|+|++.-
T Consensus 263 ~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 263 EEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 6667778 88876 467776532 12 69999999998753
No 105
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=26.43 E-value=65 Score=25.49 Aligned_cols=52 Identities=10% Similarity=-0.010 Sum_probs=31.1
Q ss_pred HHHHHcCcEEEEE-eccccccc------------cC-----CCCEEEEcCCCCccc-ccCCCCceeecceE
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL------------GS-----EYNTIFNCTGLGART-LCNDMHVIPVRGQT 78 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~------------~g-----~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~ 78 (200)
+.+++.|++++.. +|.+++.. .+ .+|.||+|+|..... ++..+.+.-.+|.+
T Consensus 210 ~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i 280 (360)
T 3ab1_A 210 RARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENAL 280 (360)
T ss_dssp HHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEE
T ss_pred HHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCee
Confidence 5667788998873 55544321 12 689999999977653 44433332225543
No 106
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.05 E-value=40 Score=26.35 Aligned_cols=52 Identities=6% Similarity=0.012 Sum_probs=30.5
Q ss_pred HHHHHcCcEEEEE-eccccccc------------cC-----CCCEEEEcCCCCccc-ccCCCCceeecceE
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL------------GS-----EYNTIFNCTGLGART-LCNDMHVIPVRGQT 78 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~------------~g-----~ad~VV~AaG~~s~~-L~~~~pl~p~rGq~ 78 (200)
+.+++.|++++.. +|.+++.. .+ .+|.||+|+|.-... ++..+.+.-.+|.+
T Consensus 199 ~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i 269 (335)
T 2zbw_A 199 KAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKI 269 (335)
T ss_dssp HHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEE
T ss_pred hccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCee
Confidence 4455569998863 55443211 12 689999999987653 54433333235553
No 107
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=25.67 E-value=39 Score=28.14 Aligned_cols=37 Identities=5% Similarity=-0.062 Sum_probs=27.3
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC--CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS--EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g--~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|++++.. .+ .+|.||+|+|....
T Consensus 197 ~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 197 KSLEKQAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHTTTEEEEETCCEEEEEECSSCEEEEESSCEEEESEEEECSCCBCC
T ss_pred HHHHHcCCEEEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECcCCCCC
Confidence 677888999998 467666521 12 79999999998654
No 108
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=25.22 E-value=32 Score=29.14 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=28.3
Q ss_pred HHHHHcCcEEEEE-eccccccc----------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL----------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~----------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++.. +|++++.. .| .+|.||+|+|...+.
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 7788899999984 66665421 12 799999999987654
No 109
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=24.92 E-value=41 Score=29.09 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=27.8
Q ss_pred HHHHHcCcEEEE-Eeccccccc-------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL-------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~-------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++. .+|.+++.. .+ .+|.||+|+|....
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 678889999987 466666431 12 79999999998755
No 110
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=24.80 E-value=31 Score=26.64 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=25.3
Q ss_pred HHHHHHcCcEEEEEeccccccc---------cC---CCCEEEEcCCCCcc
Q psy1702 26 TVLFKTAGGKVIEKYISSFSEL---------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~~V~~l~~~---------~g---~ad~VV~AaG~~s~ 63 (200)
.+.+++.+.++....|...... .+ .+|.||+|+|...+
T Consensus 73 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 73 RTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 4777888988876554433211 11 78999999997543
No 111
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=24.48 E-value=29 Score=29.72 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=27.6
Q ss_pred HHHHHcCcEEEEE-ecccccc-------------ccC----CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSE-------------LGS----EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~-------------~~g----~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++.. +|++++. ..| .+|.||+|+|.+...
T Consensus 263 ~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 263 DRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred HHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 7788899999873 5555432 012 689999999998765
No 112
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=24.46 E-value=49 Score=25.36 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=31.6
Q ss_pred cCCce-ecChhhhhH-hHHHHHHcCcEEEEEecccc-cc--------c--c-C-CCCEEEEcCCCC
Q psy1702 11 LPVYK-RMSEEELAV-YTVLFKTAGGKVIEKYISSF-SE--------L--G-S-EYNTIFNCTGLG 61 (200)
Q Consensus 11 ~~~~~-~~~~~~~~~-~~~~~~~~Gv~~~~~~V~~l-~~--------~--~-g-~ad~VV~AaG~~ 61 (200)
.|++. .+..+++.. +-+.+++.|++++..+|.++ +. . . . .+|.||+|+|..
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 52 YPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSA 117 (315)
T ss_dssp STTCCSCBCHHHHHHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCC
Confidence 34444 334444444 23777888999887666665 11 0 0 1 689999999973
No 113
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=23.97 E-value=28 Score=28.77 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=26.2
Q ss_pred HHHHHcCcEEEEEeccccccc-------cC---CCCEEEEcCCCC
Q psy1702 27 VLFKTAGGKVIEKYISSFSEL-------GS---EYNTIFNCTGLG 61 (200)
Q Consensus 27 ~~~~~~Gv~~~~~~V~~l~~~-------~g---~ad~VV~AaG~~ 61 (200)
+.+++.|++++..+|+.++.. .+ .+|.+|+|+|..
T Consensus 64 ~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 64 PLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCE
T ss_pred HHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcc
Confidence 566778999987777766532 12 799999999975
No 114
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=23.46 E-value=46 Score=27.66 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=27.1
Q ss_pred HHHHHcCcEEEEE-ecccccc-c--------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSE-L--------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~-~--------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++.. +|++++. . .+ .+|.||+|+|....
T Consensus 199 ~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 199 KDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 7788899999984 5666543 1 12 79999999997654
No 115
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=23.31 E-value=49 Score=23.85 Aligned_cols=51 Identities=14% Similarity=0.107 Sum_probs=31.0
Q ss_pred CCceecChhhhhH-h------------HHHHHHcCcEEEE-E-e-----ccccccccCCCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-Y------------TVLFKTAGGKVIE-K-Y-----ISSFSELGSEYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~------------~~~~~~~Gv~~~~-~-~-----V~~l~~~~g~ad~VV~AaG~~s~ 63 (200)
||.-.|.++| |. + -+.+.++|+++.. + . |..|.+..+.+|.||+=+|+++.
T Consensus 10 PNLNlLG~RE-P~iYG~~Tl~di~~~l~~~a~~~g~~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~TH 80 (154)
T 1uqr_A 10 PNLNMLGKRE-PHIYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPGAFTH 80 (154)
T ss_dssp TTGGGTTCSS-GGGTTCCCHHHHHHHHHHHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHHH
T ss_pred CCccccCCCC-CCcCCCCCHHHHHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhcc
Confidence 5666777777 55 2 1677888876643 2 1 33344333467877777777774
No 116
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=23.06 E-value=49 Score=28.25 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=28.2
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC-------CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS-------EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g-------~ad~VV~AaG~~s~~ 64 (200)
+.++++|++++. ..|++++.. .+ .+|.||.|+|.-.+.
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~ 334 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP 334 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCH
T ss_pred HHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCH
Confidence 788899999987 466666432 11 599999999987653
No 117
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=22.88 E-value=24 Score=27.35 Aligned_cols=37 Identities=22% Similarity=0.166 Sum_probs=26.9
Q ss_pred HHHHHcCcEEEEE-eccccccc------------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL------------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~------------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++.. +|+.++.. .+ .+|.||+|+|.+..
T Consensus 64 ~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 64 VHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 6677789999885 77666321 12 78999999998654
No 118
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=22.81 E-value=52 Score=27.92 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=27.6
Q ss_pred HHHHHcCcEEEEE-eccccccc----------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL----------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~----------~g---~ad~VV~AaG~~s~ 63 (200)
+.++++|++++.. +|.+++.. .| .+|.||+|+|....
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 7788899999984 66665421 12 79999999998654
No 119
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=22.73 E-value=44 Score=23.82 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=30.7
Q ss_pred CCceecChhhhhH-h------------HHHHHHcCcEEEE-E-e-----ccccccccCCCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-Y------------TVLFKTAGGKVIE-K-Y-----ISSFSELGSEYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~------------~~~~~~~Gv~~~~-~-~-----V~~l~~~~g~ad~VV~AaG~~s~ 63 (200)
||.-.|.++| |. + -+.+.++|+++.. + . |..|.+..+.+|.||+=+|+++.
T Consensus 9 PNLNlLG~RE-P~iYG~~tl~di~~~l~~~a~~~g~~~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~TH 79 (143)
T 1gqo_A 9 PNVNRLGSRE-PEVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSH 79 (143)
T ss_dssp TTGGGTTSSC-HHHHCSCCHHHHHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGG
T ss_pred CCccccCCCC-CCcCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhcc
Confidence 5666777777 55 2 1677778876643 2 1 33344333467777777777774
No 120
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=22.35 E-value=35 Score=28.57 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=27.0
Q ss_pred HHHHHcCcEEEE-Eecccccc--c--------------cC---CCCEEEEcCCCCccc
Q psy1702 27 VLFKTAGGKVIE-KYISSFSE--L--------------GS---EYNTIFNCTGLGART 64 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~--~--------------~g---~ad~VV~AaG~~s~~ 64 (200)
+.+++.|++++. .+|++++. . .+ .+|.||+|+|...+.
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 777889999987 35655532 0 11 789999999987553
No 121
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=22.08 E-value=57 Score=26.74 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=29.1
Q ss_pred HHHHHcCcEEEEE-ecccccc-----ccC---CCCEEEEcCCCCcc-ccc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSE-----LGS---EYNTIFNCTGLGAR-TLC 66 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~-----~~g---~ad~VV~AaG~~s~-~L~ 66 (200)
+.+++.|++++.. +|.+++. ..| .+|.||+|+|...+ .++
T Consensus 195 ~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 244 (408)
T 2gqw_A 195 RYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALA 244 (408)
T ss_dssp HHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred HHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHH
Confidence 6788899999984 6666541 122 79999999998755 344
No 122
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=22.07 E-value=50 Score=27.76 Aligned_cols=41 Identities=5% Similarity=0.108 Sum_probs=28.5
Q ss_pred HHHHHcCcEEEE-Eeccccccc---------cC--CCCEEEEcCCCCcc-cccC
Q psy1702 27 VLFKTAGGKVIE-KYISSFSEL---------GS--EYNTIFNCTGLGAR-TLCN 67 (200)
Q Consensus 27 ~~~~~~Gv~~~~-~~V~~l~~~---------~g--~ad~VV~AaG~~s~-~L~~ 67 (200)
+.+++.|++++. .+|.+++.. .+ .+|.||+|+|.... .++.
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~ 288 (480)
T 3cgb_A 235 KEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLE 288 (480)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGT
T ss_pred HHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHH
Confidence 678889999987 356555321 12 79999999998764 3444
No 123
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=21.98 E-value=54 Score=23.60 Aligned_cols=51 Identities=12% Similarity=0.108 Sum_probs=31.4
Q ss_pred CCceecChhhhhH-h------------HHHHHHcCcEEEE-E-e-----ccccccccCCCCEEEEcCCCCcc
Q psy1702 12 PVYKRMSEEELAV-Y------------TVLFKTAGGKVIE-K-Y-----ISSFSELGSEYNTIFNCTGLGAR 63 (200)
Q Consensus 12 ~~~~~~~~~~~~~-~------------~~~~~~~Gv~~~~-~-~-----V~~l~~~~g~ad~VV~AaG~~s~ 63 (200)
||.-.|+.+| |. + -+.+.++|+++.. + . |..|.+..+.+|.||+=.|+|+.
T Consensus 16 PNLNlLG~RE-P~iYG~~Tl~di~~~l~~~a~~~g~~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~TH 86 (153)
T 3lwz_A 16 PNLNLLGTRE-PEKYGYTTLAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTH 86 (153)
T ss_dssp TTGGGTTTSS-HHHHCCCCHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGG
T ss_pred CCccccCCCC-CCcCCCCCHHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCceEEEcccccee
Confidence 5667777777 55 2 1667778876643 2 1 33344333467877777777774
No 124
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=21.52 E-value=40 Score=28.61 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=34.6
Q ss_pred HHHHHcCcEEEEE-eccccccc---------cC---CCCEEEEcCCCCccc-ccC--CCCceeecceEE
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL---------GS---EYNTIFNCTGLGART-LCN--DMHVIPVRGQTI 79 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~---------~g---~ad~VV~AaG~~s~~-L~~--~~pl~p~rGq~~ 79 (200)
+.++++|++++.. .|++++.. .| .+|.||+|+|...+. ++. .+.+.+.+|.+.
T Consensus 234 ~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~ 302 (493)
T 1m6i_A 234 EKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFR 302 (493)
T ss_dssp HHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEE
T ss_pred HHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEE
Confidence 6778899999874 56665421 12 799999999987653 432 344444345544
No 125
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=20.52 E-value=55 Score=27.08 Aligned_cols=36 Identities=8% Similarity=0.194 Sum_probs=26.6
Q ss_pred HHHHHcCcEEEEE-eccccccc-------cC---CCCEEEEcCCCCc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL-------GS---EYNTIFNCTGLGA 62 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~-------~g---~ad~VV~AaG~~s 62 (200)
+.+++.|++++.. +|+.++.. .+ .+|.||+|+|...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCc
Confidence 6778899999874 67666531 12 7999999999854
No 126
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.33 E-value=48 Score=26.81 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=26.1
Q ss_pred HHHHHHcCcEEEEE-eccccccc------cC---CCCEEEEcCCCC
Q psy1702 26 TVLFKTAGGKVIEK-YISSFSEL------GS---EYNTIFNCTGLG 61 (200)
Q Consensus 26 ~~~~~~~Gv~~~~~-~V~~l~~~------~g---~ad~VV~AaG~~ 61 (200)
.+.+++.|++++.. +|+.++.. .+ .+|.+|+|+|..
T Consensus 67 ~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 67 LDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp HHHHHHHTEEEECSCCEEEEETTTTEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHhCCcEEEECCEEEEEECCCCEEEECCcEEECCEEEECCCCC
Confidence 36778889999875 56665421 22 799999999963
No 127
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=20.24 E-value=63 Score=26.76 Aligned_cols=37 Identities=3% Similarity=0.077 Sum_probs=26.8
Q ss_pred HHHHHcCcEEEEE-eccccccc--------cC---CCCEEEEcCCCCcc
Q psy1702 27 VLFKTAGGKVIEK-YISSFSEL--------GS---EYNTIFNCTGLGAR 63 (200)
Q Consensus 27 ~~~~~~Gv~~~~~-~V~~l~~~--------~g---~ad~VV~AaG~~s~ 63 (200)
+.+++.|++++.. +|.+++.. .+ .+|.||+|+|...+
T Consensus 199 ~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 199 EEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCEEES
T ss_pred HHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCCCCC
Confidence 6778889999883 56555321 12 79999999998754
Done!