BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17021
(199 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 140/194 (72%), Gaps = 32/194 (16%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 918 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK------------ 965
Query: 61 HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 120
T V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCE
Sbjct: 966 --------------------TPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCE 1005
Query: 121 NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN 180
NKH+ N I I+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+
Sbjct: 1006 NKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYD 1065
Query: 181 TVASADKFGNVCIV 194
TVA ADKFGN+C+V
Sbjct: 1066 TVAGADKFGNICVV 1079
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 89/122 (72%), Positives = 109/122 (89%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
++E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN IV I
Sbjct: 935 TSLELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAIVSIN 994
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+
Sbjct: 995 AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054
Query: 193 IV 194
++
Sbjct: 1055 VI 1056
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 108/120 (90%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937 LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997 GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 108/120 (90%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937 LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997 GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 107/124 (86%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
+G +EFVH+T VDEVP A+C + G LL GVGR LRLYD+GKKKLLRKCENKH+PN IV
Sbjct: 935 MGRELEFVHRTPVDEVPMALCAYNGLLLAGVGRMLRLYDMGKKKLLRKCENKHIPNAIVN 994
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
I++MG RI+VSDVQESVF+VRYKR ENQL+IFADDT PRW+T +CVLDY+TVA ADKFGN
Sbjct: 995 IQAMGKRIFVSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVLDYDTVAVADKFGN 1054
Query: 191 VCIV 194
+ I+
Sbjct: 1055 IAIL 1058
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EFVH+T VDEVP A+C + G LL GVGR LRLYD+GKKKLLRKCENK
Sbjct: 939 LEFVHRTPVDEVPMALCAYNGLLLAGVGRMLRLYDMGKKKLLRKCENK 986
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 108/122 (88%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
++E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I
Sbjct: 935 TSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSIN 994
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+
Sbjct: 995 AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054
Query: 193 IV 194
++
Sbjct: 1055 VI 1056
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 IELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/120 (71%), Positives = 107/120 (89%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937 LELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997 GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 LELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 108/122 (88%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
++E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I
Sbjct: 935 TSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSIN 994
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+
Sbjct: 995 AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054
Query: 193 IV 194
++
Sbjct: 1055 VI 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 937 IELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 984
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 109/123 (88%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+ I
Sbjct: 934 GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct: 994 HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENK 984
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 109/123 (88%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+ I
Sbjct: 934 GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct: 994 HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENK 984
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 109/122 (89%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
++E +H+T++DE+P A+CP+QG +LVGVG+ LRLYD+GKKKLLRKCENKH+PN ++ I
Sbjct: 934 TSIELMHRTTLDEIPLAICPYQGRVLVGVGKMLRLYDMGKKKLLRKCENKHIPNAVICIN 993
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+
Sbjct: 994 AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1053
Query: 193 IV 194
++
Sbjct: 1054 VI 1055
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 44/48 (91%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +H+T++DE+P A+CP+QG +LVGVG+ LRLYD+GKKKLLRKCENK
Sbjct: 936 IELMHRTTLDEIPLAICPYQGRVLVGVGKMLRLYDMGKKKLLRKCENK 983
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 108/123 (87%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+ I
Sbjct: 934 GDKLEFMHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++G R+ V+DVQES+F VRYKR ENQL+IFADDT PRW+TT+C+LDY+T+ASADKFGN+
Sbjct: 994 HTIGQRVIVTDVQESLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNI 1053
Query: 192 CIV 194
IV
Sbjct: 1054 SIV 1056
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFMHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENK 984
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 105/123 (85%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EFVHKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N IV I
Sbjct: 934 GEKLEFVHKTPVEEVPAAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENKHISNFIVGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++G R+ +SDVQES VRYKR ENQL+IFADDT PRW+TTSC+LDY+TVA ADKFGN+
Sbjct: 994 QTIGQRVILSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
CIV
Sbjct: 1054 CIV 1056
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EFVHKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I F QT
Sbjct: 937 LEFVHKTPVEEVPAAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENK-HISNFIVGIQT 995
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 108/122 (88%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
++E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I
Sbjct: 919 TSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSIN 978
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G RIYVSDVQESV+ VRYKR ENQL++FADDT PR+ITT+CVLDY+TVA+ADK+GN+
Sbjct: 979 AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRFITTTCVLDYDTVATADKYGNIA 1038
Query: 193 IV 194
++
Sbjct: 1039 VI 1040
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENK
Sbjct: 921 IELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENK 968
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 105/123 (85%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFMHKTPVEEVPAAIAPFQGRILIGVGKLLRVYDLGKKKLLRKCENKHIANYICGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+C+LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFMHKTPVEEVPAAIAPFQGRILIGVGKLLRVYDLGKKKLLRKCENK 984
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
(STAF130) [Ciona intestinalis]
Length = 1216
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 116/150 (77%), Gaps = 3/150 (2%)
Query: 45 CENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRY 104
CE + + R + HT+ + GN +E VHKT VDEVP A+CP+QG +L+GVG+
Sbjct: 909 CELLINPRQARGGGEIHTYKINEE---GNKLELVHKTVVDEVPSAICPYQGRVLIGVGKL 965
Query: 105 LRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFAD 164
LR+YDLGKKKLLRKCENKH+PN I I+++GHRI V DVQESV VRY+R+ENQL++FAD
Sbjct: 966 LRIYDLGKKKLLRKCENKHIPNYIASIQAVGHRIIVCDVQESVHWVRYRRHENQLVVFAD 1025
Query: 165 DTQPRWITTSCVLDYNTVASADKFGNVCIV 194
DT PRW+T++ VLD+NTVA +DKFGN+ ++
Sbjct: 1026 DTYPRWVTSATVLDWNTVAVSDKFGNISVL 1055
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VDEVP A+CP+QG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 936 LELVHKTVVDEVPSAICPYQGRVLIGVGKLLRIYDLGKKKLLRKCENK 983
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
Length = 1217
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Query: 69 RLV--GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN 126
RLV G +EFVHKT V++VP A+ PFQG LVGVG+ LR+YDLGKKKLLRKCENKH+PN
Sbjct: 929 RLVSGGEKLEFVHKTPVEDVPLAIAPFQGRALVGVGKLLRIYDLGKKKLLRKCENKHVPN 988
Query: 127 LIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASAD 186
L+ I ++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRW+TT+C+LDY+T+A+AD
Sbjct: 989 LVTGIHTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAAD 1048
Query: 187 KFGNVCIV 194
KFGN+ IV
Sbjct: 1049 KFGNISIV 1056
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EFVHKT V++VP A+ PFQG LVGVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFVHKTPVEDVPLAIAPFQGRALVGVGKLLRIYDLGKKKLLRKCENK 984
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/120 (71%), Positives = 104/120 (86%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT+VDE P A+CP+ G LLVGVGR LRLYDLGKKKLLRKCENK++PN IV I +
Sbjct: 938 LELVHKTTVDEAPAAVCPYHGRLLVGVGRMLRLYDLGKKKLLRKCENKYIPNQIVSICAT 997
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R++VSDVQESV++VRYKR ENQL+IFADDT PRWIT + +LDY+TVA+ADKFGN+ I+
Sbjct: 998 GQRVFVSDVQESVYMVRYKRQENQLIIFADDTHPRWITCTTILDYDTVATADKFGNIAII 1057
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT+VDE P A+CP+ G LLVGVGR LRLYDLGKKKLLRKCENK
Sbjct: 938 LELVHKTTVDEAPAAVCPYHGRLLVGVGRMLRLYDLGKKKLLRKCENK 985
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+A+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 947 SALEFLHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1006
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1007 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1066
Query: 193 I 193
I
Sbjct: 1067 I 1067
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 949 LEFLHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 996
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 107/122 (87%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+A+EFVHKT V++ PYA+C +QG +L+GVGR LRLYD+GKKKLLRKCENKHLP+ +V I+
Sbjct: 933 SALEFVHKTPVEDTPYAICAYQGRVLIGVGRLLRLYDMGKKKLLRKCENKHLPSCVVNIQ 992
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
++G R+YV+DVQES+ VRYKR ENQL+IFADDT PR++TT C+LDY+TVA ADKFGN+
Sbjct: 993 ALGQRVYVADVQESIHFVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTVAVADKFGNIS 1052
Query: 193 IV 194
++
Sbjct: 1053 VL 1054
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EFVHKT V++ PYA+C +QG +L+GVGR LRLYD+GKKKLLRKCENK
Sbjct: 935 LEFVHKTPVEDTPYAICAYQGRVLIGVGRLLRLYDMGKKKLLRKCENK 982
>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
Length = 463
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 180 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 239
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 240 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 299
Query: 192 CIV 194
C+V
Sbjct: 300 CVV 302
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 183 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 241
Query: 61 HTH 63
H
Sbjct: 242 IGH 244
>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
Length = 494
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 211 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 270
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 271 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 330
Query: 192 CIV 194
C+V
Sbjct: 331 CVV 333
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 214 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 272
Query: 61 HTH 63
H
Sbjct: 273 IGH 275
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 367 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 426
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 427 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 486
Query: 192 CIV 194
C+V
Sbjct: 487 CVV 489
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 370 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 428
Query: 61 HTH 63
H
Sbjct: 429 IGH 431
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 352 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 411
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 412 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 471
Query: 192 CIV 194
C+V
Sbjct: 472 CVV 474
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 355 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 413
Query: 61 HTH 63
H
Sbjct: 414 IGH 416
>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 220 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 279
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 280 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 339
Query: 192 CIV 194
C+V
Sbjct: 340 CVV 342
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 223 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 281
Query: 61 HTH 63
H
Sbjct: 282 IGH 284
>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
rubripes]
Length = 1020
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 107/127 (84%), Gaps = 2/127 (1%)
Query: 69 RLV--GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN 126
RLV G +EFVHKT V++ P A+ PFQG +LVGVG+ LR+YD+GKKKLLRKCENKH+PN
Sbjct: 894 RLVSGGEKLEFVHKTPVEDAPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKHIPN 953
Query: 127 LIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASAD 186
++ I + G R+ V+DVQES+F VRY+R ENQL+IFADDT PRW+TT+C+LDY+T+ASAD
Sbjct: 954 VVTSIHTSGQRVIVTDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASAD 1013
Query: 187 KFGNVCI 193
KFGN+ I
Sbjct: 1014 KFGNISI 1020
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EFVHKT V++ P A+ PFQG +LVGVG+ LR+YD+GKKKLLRKCENK
Sbjct: 902 LEFVHKTPVEDAPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENK 949
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 946 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1005
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1006 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1065
Query: 193 I 193
I
Sbjct: 1066 I 1066
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 948 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 995
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/120 (70%), Positives = 101/120 (84%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VH T V+E P A+CPFQG LL GVG+ LRLYDLG+KKLLRKCENK++PN IV I++M
Sbjct: 739 LELVHATPVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENKYIPNAIVSIQAM 798
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G+R+ VSDVQES F +RYKR ENQL+IFADD+ PRWIT SC+LDY TVA ADKFGNV I+
Sbjct: 799 GNRVVVSDVQESFFFLRYKRQENQLVIFADDSVPRWITASCMLDYETVAGADKFGNVSII 858
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH T V+E P A+CPFQG LL GVG+ LRLYDLG+KKLLRKCENK
Sbjct: 739 LELVHATPVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENK 786
>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 425
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 218 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 277
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 278 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 337
Query: 192 CIV 194
C+V
Sbjct: 338 CVV 340
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 221 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 279
Query: 61 HTH 63
H
Sbjct: 280 IGH 282
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 625 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 684
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 685 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 744
Query: 192 CIV 194
C+V
Sbjct: 745 CVV 747
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 628 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 686
Query: 61 HTH 63
H
Sbjct: 687 IGH 689
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 916 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 975
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 976 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1035
Query: 192 CIV 194
C+V
Sbjct: 1036 CVV 1038
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 919 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 977
Query: 61 HTH 63
H
Sbjct: 978 IGH 980
>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
Length = 503
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 220 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGI 279
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 280 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI 339
Query: 192 CIV 194
C+V
Sbjct: 340 CVV 342
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 223 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK 270
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 881 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 940
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 941 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1000
Query: 192 CIV 194
C+V
Sbjct: 1001 CVV 1003
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 884 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 942
Query: 61 HTH 63
H
Sbjct: 943 IGH 945
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
Length = 1202
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 919 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 978
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 979 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1038
Query: 192 CIV 194
C+V
Sbjct: 1039 CVV 1041
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 922 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 980
Query: 61 HTH 63
H
Sbjct: 981 IGH 983
>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
Length = 840
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 605 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 664
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 665 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 724
Query: 192 CIV 194
C+V
Sbjct: 725 CVV 727
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 608 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 666
Query: 61 HTH 63
H
Sbjct: 667 IGH 669
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 614 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 673
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 674 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 733
Query: 192 CIV 194
C+V
Sbjct: 734 CVV 736
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 617 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 675
Query: 61 HTH 63
H
Sbjct: 676 IGH 678
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 970 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 1029
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 1030 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1089
Query: 192 CIV 194
C+V
Sbjct: 1090 CVV 1092
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 973 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 1031
Query: 61 HTH 63
H
Sbjct: 1032 IGH 1034
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 995
Query: 61 HTH 63
H
Sbjct: 996 IGH 998
>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
Length = 399
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 116 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 175
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 176 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 235
Query: 192 CIV 194
C+V
Sbjct: 236 CVV 238
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 119 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 177
Query: 61 HTH 63
H
Sbjct: 178 IGH 180
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK 984
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/120 (70%), Positives = 101/120 (84%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VH TSV+E P A+CPFQG LL GVG+ LRLYDLG+KKLLRKCENK++P+ IV I+SM
Sbjct: 934 LELVHATSVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENKYIPSAIVSIQSM 993
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G+R+ V DVQES F +RYKR ENQL+IFADD PRWIT SC+LDY+TVA ADKFGNV I+
Sbjct: 994 GNRVVVGDVQESFFFLRYKRQENQLVIFADDAVPRWITASCMLDYDTVAGADKFGNVSII 1053
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH TSV+E P A+CPFQG LL GVG+ LRLYDLG+KKLLRKCENK
Sbjct: 934 LELVHATSVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKCENK 981
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 839 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 898
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 899 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 958
Query: 192 CIV 194
C+V
Sbjct: 959 CVV 961
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 842 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 900
Query: 61 HTH 63
H
Sbjct: 901 IGH 903
>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
Length = 399
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 116 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 175
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 176 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 235
Query: 192 CIV 194
C+V
Sbjct: 236 CVV 238
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 119 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 177
Query: 61 HTH 63
H
Sbjct: 178 IGH 180
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI 1053
Query: 192 CIV 194
C+V
Sbjct: 1054 CVV 1056
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK 984
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+A+EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 946 SALEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1005
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1006 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1065
Query: 193 I 193
I
Sbjct: 1066 I 1066
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 948 LEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 995
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 988 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 1047
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 1048 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1107
Query: 192 CIV 194
C+V
Sbjct: 1108 CVV 1110
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 991 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 1049
Query: 61 HTH 63
H
Sbjct: 1050 IGH 1052
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 104/123 (84%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I I
Sbjct: 932 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 992 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1051
Query: 192 CIV 194
C+V
Sbjct: 1052 CVV 1054
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK I + QT
Sbjct: 935 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK-HIANYISGIQT 993
Query: 61 HTH 63
H
Sbjct: 994 IGH 996
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+A+EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 945 SALEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 947 LEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 994
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 103/120 (85%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T +D+ P A+CPFQG LL G+G+ LR+YDLGKKKLLRKCENKH+PN IV I+ M
Sbjct: 937 LEHMHRTEIDDAPGALCPFQGRLLAGIGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQGM 996
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R+YVSDVQESV+ ++YKR ENQL+IFADDT PRWIT++ +LDY+TVA+ DKFGN+ I+
Sbjct: 997 GQRVYVSDVQESVYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATGDKFGNIAIL 1056
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +H+T +D+ P A+CPFQG LL G+G+ LR+YDLGKKKLLRKCENK
Sbjct: 937 LEHMHRTEIDDAPGALCPFQGRLLAGIGKVLRIYDLGKKKLLRKCENK 984
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 946 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1005
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1006 AMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1065
Query: 193 I 193
I
Sbjct: 1066 I 1066
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 948 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 995
>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
Length = 341
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 111 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 170
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 171 AMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 230
Query: 193 I 193
I
Sbjct: 231 I 231
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 113 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 160
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 943 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1002
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1003 AMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1062
Query: 193 I 193
I
Sbjct: 1063 I 1063
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 945 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 992
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 945 SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064
Query: 193 I 193
I
Sbjct: 1065 I 1065
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 947 LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 994
>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
Length = 688
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 103/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P IV I+
Sbjct: 406 SSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 465
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 466 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 525
Query: 193 I 193
I
Sbjct: 526 I 526
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENK
Sbjct: 408 LEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENK 455
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 104/121 (85%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENKH+P IV I+
Sbjct: 991 SSLEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQ 1050
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+
Sbjct: 1051 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1110
Query: 193 I 193
I
Sbjct: 1111 I 1111
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T ++E+P A+C FQG LL G GR LR+YDLGKKK+LRKCENK
Sbjct: 993 LEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENK 1040
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 104/120 (86%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E H+T +D+ P A+C FQG +LVG+G+ LR+YDLGKKKLLRKCENKH+PN IV I++M
Sbjct: 935 LEHYHRTEIDDAPGAICSFQGRVLVGIGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQAM 994
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R++VSDVQES++ V+YKR ENQL+IFADDT PRWITTS +LDY+TVA+ADKFGNV ++
Sbjct: 995 GSRVFVSDVQESIYCVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNVSVL 1054
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E H+T +D+ P A+C FQG +LVG+G+ LR+YDLGKKKLLRKCENK
Sbjct: 935 LEHYHRTEIDDAPGAICSFQGRVLVGIGKVLRIYDLGKKKLLRKCENK 982
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 103/122 (84%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
N +E VH+T +D+ P A+C FQG LL G+G+ LR+YDLGKKKLLRKCENKH+PN IV I+
Sbjct: 1005 NELEHVHRTEIDDAPGALCAFQGRLLAGIGKVLRMYDLGKKKLLRKCENKHIPNQIVNIQ 1064
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
MG R+YVSDVQESV+ ++YKR ENQL+IFADDT PRW+T++ +LDY+TVA+ DKFGN+
Sbjct: 1065 GMGQRVYVSDVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIA 1124
Query: 193 IV 194
++
Sbjct: 1125 VL 1126
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH+T +D+ P A+C FQG LL G+G+ LR+YDLGKKKLLRKCENK
Sbjct: 1007 LEHVHRTEIDDAPGALCAFQGRLLAGIGKVLRMYDLGKKKLLRKCENK 1054
>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
Length = 645
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 103/120 (85%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E H+T +D+ P A+ FQG +LVGVGR LR+YDLGKKKLLRKCENKH+PN IV I++M
Sbjct: 365 LEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENKHIPNQIVNIQAM 424
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R++VSDVQES++ ++YKR ENQL+IFADDT PRWITTS +LDY+TVA+ADKFGN+ I+
Sbjct: 425 GSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAIL 484
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E H+T +D+ P A+ FQG +LVGVGR LR+YDLGKKKLLRKCENK
Sbjct: 365 LEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENK 412
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 103/120 (85%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E H+T +D+ P A+ FQG +LVGVGR LR+YDLGKKKLLRKCENKH+PN IV I++M
Sbjct: 935 LEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENKHIPNQIVNIQAM 994
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R++VSDVQES++ ++YKR ENQL+IFADDT PRWITTS +LDY+TVA+ADKFGN+ I+
Sbjct: 995 GSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAIL 1054
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E H+T +D+ P A+ FQG +LVGVGR LR+YDLGKKKLLRKCENK
Sbjct: 935 LEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENK 982
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 104/131 (79%), Gaps = 8/131 (6%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--------H 123
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK H
Sbjct: 934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKILSFLSQKH 993
Query: 124 LPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVA 183
+ N I I+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA
Sbjct: 994 IANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVA 1053
Query: 184 SADKFGNVCIV 194
ADKFGN+C+V
Sbjct: 1054 GADKFGNICVV 1064
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK+
Sbjct: 937 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKI 985
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 100/120 (83%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT +DE P A+ F G LL GVGR LRLYD+G++KLLRKCEN+H+PNLI I+++
Sbjct: 936 LELVHKTPIDEYPGALAAFNGKLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTI 995
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
RI+VSDVQESVF V+YK+ ENQL+IFADDT PRWIT +C+LDY+TVA ADKFGNV ++
Sbjct: 996 RQRIFVSDVQESVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAVL 1055
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT +DE P A+ F G LL GVGR LRLYD+G++KLLRKCEN+
Sbjct: 936 LELVHKTPIDEYPGALAAFNGKLLAGVGRMLRLYDIGRRKLLRKCENR 983
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 103/121 (85%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++E VHKT+VD VP A+C FQG +++G+GR LRLYD+GKKKLLRKCENK +P LI+ I
Sbjct: 937 SLELVHKTTVDNVPTAICGFQGRVIIGIGRILRLYDIGKKKLLRKCENKQIPLLIMGIRV 996
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
MG RIYVSDVQESV++VRYKR ENQL+IFADDTQPR+IT +LDYNTVA+ADK GN+ +
Sbjct: 997 MGCRIYVSDVQESVYMVRYKRNENQLIIFADDTQPRYITAMEILDYNTVATADKCGNISV 1056
Query: 194 V 194
V
Sbjct: 1057 V 1057
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT+VD VP A+C FQG +++G+GR LRLYD+GKKKLLRKCENK
Sbjct: 938 LELVHKTTVDNVPTAICGFQGRVIIGIGRILRLYDIGKKKLLRKCENK 985
>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
Length = 541
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 101/120 (84%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT +D+ P A+ F G L+ GVGR LR+YD+G++KLLRKCEN+H+PNLI I+++
Sbjct: 261 LELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMYDIGRRKLLRKCENRHIPNLIADIKTI 320
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+V+DVQESVF V+YK+ ENQL+IFADDT PRWIT +CVLDY+TVA +DKFGNV ++
Sbjct: 321 GQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVAVM 380
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT +D+ P A+ F G L+ GVGR LR+YD+G++KLLRKCEN+
Sbjct: 261 LELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMYDIGRRKLLRKCENR 308
>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 101/120 (84%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E VHKT +D+ P A+ F G L+ GVGR LR+YD+G++KLLRKCEN+H+PNLI I+++
Sbjct: 128 LELVHKTPIDDYPGALAAFNGKLMAGVGRMLRMYDIGRRKLLRKCENRHIPNLIADIKTI 187
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+V+DVQESVF V+YK+ ENQL+IFADDT PRWIT +CVLDY+TVA +DKFGNV ++
Sbjct: 188 GQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVSVM 247
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT +D+ P A+ F G L+ GVGR LR+YD+G++KLLRKCEN+
Sbjct: 128 LELVHKTPIDDYPGALAAFNGKLMAGVGRMLRMYDIGRRKLLRKCENR 175
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 100/121 (82%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
+E +H+T VD+VP A+ FQG +L+GVGR+LR+YDLGKKK+LRKCENK LPN + I
Sbjct: 934 GLELLHRTPVDDVPAAIAAFQGRVLIGVGRHLRIYDLGKKKMLRKCENKFLPNFVTAIHV 993
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G+RI VSD+Q+S VRYKR+ENQL++FADDT PRW+T SC+LDYNT+A ADKFGN+C+
Sbjct: 994 NGNRIMVSDIQDSFHFVRYKRHENQLIVFADDTCPRWLTCSCMLDYNTMAGADKFGNICV 1053
Query: 194 V 194
V
Sbjct: 1054 V 1054
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +H+T VD+VP A+ FQG +L+GVGR+LR+YDLGKKK+LRKCENK
Sbjct: 935 LELLHRTPVDDVPAAIAAFQGRVLIGVGRHLRIYDLGKKKMLRKCENK 982
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 100/123 (81%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +++ +HKT V++VP A+ FQG +L+GVGRYLR+YD+GKKK+LRKCENK +PN + I
Sbjct: 934 GESLKLLHKTPVEDVPGAIASFQGRVLIGVGRYLRIYDIGKKKMLRKCENKSIPNYVSAI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++G+RI SDVQ+S VRYKR ENQL++FADDT PRWIT SC LDYNTVA ADKFGN+
Sbjct: 994 HTVGNRIIASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVAGADKFGNI 1053
Query: 192 CIV 194
I+
Sbjct: 1054 TII 1056
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +HKT V++VP A+ FQG +L+GVGRYLR+YD+GKKK+LRKCENK
Sbjct: 937 LKLLHKTPVEDVPGAIASFQGRVLIGVGRYLRIYDIGKKKMLRKCENK 984
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 102/123 (82%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +E VH T +D+VP AM PFQG LLVGVG+ LR+YD+GKKK+LRKCENKHLP L+V I
Sbjct: 893 GSKLEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCENKHLPYLVVDI 952
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ MG R+YV DVQE+V + Y+ +ENQL+IFAD+ PR+ TTSC+LDYNTVASADKFGN+
Sbjct: 953 KVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNI 1012
Query: 192 CIV 194
I+
Sbjct: 1013 TIL 1015
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH T +D+VP AM PFQG LLVGVG+ LR+YD+GKKK+LRKCENK
Sbjct: 896 LEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCENK 943
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 102/123 (82%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +E VH T +D+VP AM PFQG LLVGVG+ LR+YD+GKKK+LRKCENKHLP L+V I
Sbjct: 931 GSKLEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCENKHLPYLVVDI 990
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ MG R+YV DVQE+V + Y+ +ENQL+IFAD+ PR+ TTSC+LDYNTVASADKFGN+
Sbjct: 991 KVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNI 1050
Query: 192 CIV 194
I+
Sbjct: 1051 TIL 1053
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH T +D+VP AM PFQG LLVGVG+ LR+YD+GKKK+LRKCENK
Sbjct: 934 LEHVHTTQLDDVPIAMAPFQGRLLVGVGKLLRIYDIGKKKMLRKCENK 981
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 104/141 (73%), Gaps = 18/141 (12%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--------- 122
G +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 832 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKAFLADGSSS 891
Query: 123 ---------HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT 173
H+ N I I+++GHR+ VSDVQES VRYKR ENQL+IFADDT PRW+TT
Sbjct: 892 VFPMYVAVRHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTT 951
Query: 174 SCVLDYNTVASADKFGNVCIV 194
+ +LDY+TVA ADKFGN+C+V
Sbjct: 952 ASLLDYDTVAGADKFGNICVV 972
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 835 LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKA 883
>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1171
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 125/198 (63%), Gaps = 21/198 (10%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-VRIKGFRKAHQ 59
+EFVHKT V++VP A+ PFQG +LVGVG+ LR+YD+GKKKLLRKCENK R + F+
Sbjct: 937 LEFVHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKPARRRRFQDEGT 996
Query: 60 TH-THSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 118
T H H +D P G L G + +R+
Sbjct: 997 TSLAHCN-------------HVGPLDGPSSDPGPQLGQLTASGGPMTT-----SSQPIRQ 1038
Query: 119 CENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178
+H+PNL+ I + G R+ V+DVQES+F VRY+R ENQL+IFADDT PRW+TT+C+LD
Sbjct: 1039 SR-QHIPNLVTGIHTTGQRVIVTDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLD 1097
Query: 179 YNTVASADKFGNVCIVST 196
Y+T+ASADKFGN+ IVST
Sbjct: 1098 YDTMASADKFGNISIVST 1115
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 101/123 (82%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT VD+VP ++ FQG +L+G+GR LR+YDLGKKKLLRKCENKH+PN I I
Sbjct: 666 GKKLEFLHKTLVDDVPSSIAAFQGRVLIGIGRLLRIYDLGKKKLLRKCENKHIPNFITNI 725
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G+R+ +SDVQES+ ++YKR ENQ++IFADD+ PRWIT +C+LD++TV ADKFGN+
Sbjct: 726 LTTGNRVIISDVQESLHFLKYKRQENQMVIFADDSNPRWITATCLLDHDTVMCADKFGNI 785
Query: 192 CIV 194
++
Sbjct: 786 TVL 788
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT VD+VP ++ FQG +L+G+GR LR+YDLGKKKLLRKCENK
Sbjct: 669 LEFLHKTLVDDVPSSIAAFQGRVLIGIGRLLRIYDLGKKKLLRKCENK 716
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 103/131 (78%), Gaps = 5/131 (3%)
Query: 61 HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 120
HT+S +VG+ + FVHKT +D VP A+C FQG LLVGVG LRLY++GK+KLLRKCE
Sbjct: 906 HTYS-----VVGSQLTFVHKTPIDGVPRALCSFQGRLLVGVGSALRLYEMGKRKLLRKCE 960
Query: 121 NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN 180
N+++PNL+V I +MG RIYV DV ES+ ++Y R N+L+IFADDT PRW+T +C +DY+
Sbjct: 961 NRNIPNLVVTISTMGDRIYVGDVAESISFLKYNRILNELVIFADDTHPRWMTAACPVDYD 1020
Query: 181 TVASADKFGNV 191
TVA ADKFGN+
Sbjct: 1021 TVAGADKFGNI 1031
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ FVHKT +D VP A+C FQG LLVGVG LRLY++GK+KLLRKCEN+
Sbjct: 915 LTFVHKTPIDGVPRALCSFQGRLLVGVGSALRLYEMGKRKLLRKCENR 962
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 94/123 (76%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF HKT VD+VP A+ PFQG LL G+GR LR+YD+GKKK+LRKCENK LPN I I
Sbjct: 904 GIKLEFQHKTEVDDVPAALEPFQGRLLAGIGRLLRVYDIGKKKMLRKCENKKLPNFICNI 963
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
SMG RI VSD+QES V+YK +NQL++FADD PRW+T C LDY+T+A ADKFGN+
Sbjct: 964 NSMGTRIVVSDIQESFHFVKYKPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNI 1023
Query: 192 CIV 194
V
Sbjct: 1024 FTV 1026
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF HKT VD+VP A+ PFQG LL G+GR LR+YD+GKKK+LRKCENK
Sbjct: 907 LEFQHKTEVDDVPAALEPFQGRLLAGIGRLLRVYDIGKKKMLRKCENK 954
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 20/172 (11%)
Query: 23 LLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTS 82
LLVG+ + L+L R+C N I +R +E VH T
Sbjct: 899 LLVGISKDLQLSP-------RECRNSF-INAYRVVKDC------------TELELVHTTV 938
Query: 83 VDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
+D+VP AMC F +L+GVGR LR+YD GKKK+LRKCENKH+PNLIV I ++G+RI V D
Sbjct: 939 MDDVPQAMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAVGNRIVVGD 998
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
VQES F +RY+ ENQL+IFADD PRW T +C++DY TV DKFGNV I+
Sbjct: 999 VQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYIL 1050
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH T +D+VP AMC F +L+GVGR LR+YD GKKK+LRKCENK
Sbjct: 931 LELVHTTVMDDVPQAMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENK 978
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 20/172 (11%)
Query: 23 LLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTS 82
LLVG+ + L+L R+C N I +R +E VH T
Sbjct: 911 LLVGISKDLQLSP-------RECRNSF-INAYRVVKDC------------TELELVHTTV 950
Query: 83 VDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
+D+VP AMC F +L+GVGR LR+YD GKKK+LRKCENKH+PNLIV I ++G+RI V D
Sbjct: 951 MDDVPQAMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAVGNRIVVGD 1010
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
VQES F +RY+ ENQL+IFADD PRW T +C++DY TV DKFGNV I+
Sbjct: 1011 VQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYIL 1062
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VH T +D+VP AMC F +L+GVGR LR+YD GKKK+LRKCENK
Sbjct: 943 LELVHTTVMDDVPQAMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENK 990
>gi|358255664|dbj|GAA57348.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 1055
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+H+T VD+ P A+C FQG LLVGVG+ LR+YD+G+KKLL+KCENKH+PNLI I
Sbjct: 751 GDHLEFIHETLVDDFPAAVCAFQGRLLVGVGKRLRIYDMGRKKLLKKCENKHIPNLITGI 810
Query: 132 ESMGHRIYVSDVQESVFLVRYK-RYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
++G RI V+DVQES F +RY+ R ENQL+IFADD PRWIT VLD +TVA +DKFGN
Sbjct: 811 YAIGSRIIVTDVQESAFWLRYRPRSENQLVIFADDANPRWITHLAVLDPSTVAISDKFGN 870
Query: 191 VCIV 194
V I+
Sbjct: 871 VIIL 874
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T VD+ P A+C FQG LLVGVG+ LR+YD+G+KKLL+KCENK
Sbjct: 754 LEFIHETLVDDFPAAVCAFQGRLLVGVGKRLRIYDMGRKKLLKKCENK 801
>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
Length = 1049
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 93/117 (79%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT V++VP A+ FQG +LVG+GR LR+YDLGKKKLLRKCENKH+PN I+ I
Sbjct: 932 GEKLELIHKTPVEDVPGAISSFQGRILVGIGRLLRIYDLGKKKLLRKCENKHVPNFIMSI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
+MGHRI+VSDVQES +RYKR ENQL+IF+DDT RWIT S LDY+TVA+ F
Sbjct: 992 HTMGHRIFVSDVQESFHFIRYKRQENQLIIFSDDTNYRWITCSTQLDYDTVAAGQAF 1048
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT V++VP A+ FQG +LVG+GR LR+YDLGKKKLLRKCENK
Sbjct: 935 LELIHKTPVEDVPGAISSFQGRILVGIGRLLRIYDLGKKKLLRKCENK 982
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 95/123 (77%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK+ PN I+ I
Sbjct: 919 GRVLELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENKNFPNTIIAI 978
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RIYV D+QES V+Y+R ENQL FADD+ PRW+T S +D++T+A ADKFGNV
Sbjct: 979 HTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNV 1038
Query: 192 CIV 194
++
Sbjct: 1039 YVM 1041
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK
Sbjct: 922 LELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENK 969
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 95/123 (77%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK+ PN I+ I
Sbjct: 932 GKVLELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENKNFPNTIIAI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RIYV D+QES V+Y+R ENQL FADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 992 HTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNI 1051
Query: 192 CIV 194
++
Sbjct: 1052 YVM 1054
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENK 982
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 95/123 (77%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK+ PN I+ I
Sbjct: 932 GRILELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENKNFPNTIIAI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RIYV D+QES V+Y+R ENQL FADD+ PRW+T S +D++T+A ADKFGNV
Sbjct: 992 HTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNV 1051
Query: 192 CIV 194
++
Sbjct: 1052 YVM 1054
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VD VP A+C FQG LLVGVG+ LR+YDLGK+KLLRKCENK
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIYDLGKRKLLRKCENK 982
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 95/126 (75%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI 128
R+ +E VHKT V+EVP AM FQG LLVG GR LR+YDLG+KKLLRKCENK+ P I
Sbjct: 922 RMANGQLELVHKTVVEEVPRAMAAFQGRLLVGTGRILRVYDLGRKKLLRKCENKNFPYRI 981
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
V I SMG R+ V DVQESV V+Y+ EN+L++FADD PR++T +C LDY+T+A DKF
Sbjct: 982 VTISSMGSRVIVGDVQESVHFVKYRAKENRLVVFADDVSPRYVTATCFLDYDTIAVGDKF 1041
Query: 189 GNVCIV 194
G++ I+
Sbjct: 1042 GSIAIL 1047
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E VHKT V+EVP AM FQG LLVG GR LR+YDLG+KKLLRKCENK ++
Sbjct: 928 LELVHKTVVEEVPRAMAAFQGRLLVGTGRILRVYDLGRKKLLRKCENK------NFPYRI 981
Query: 61 HTHSGRSDR-LVGNAMEFVH 79
T S R +VG+ E VH
Sbjct: 982 VTISSMGSRVIVGDVQESVH 1001
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 93/123 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E VHKT +D VP A+C FQG LL G+G+ LR+YDLGK+KLLRKCENK+ PN I I
Sbjct: 925 GRSLELVHKTPIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENKNFPNTITSI 984
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
S G RIYV D+QES V+Y+R ENQL FADD+ PRW+T S +D++T+A+ DKFGN+
Sbjct: 985 HSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNL 1044
Query: 192 CIV 194
V
Sbjct: 1045 FFV 1047
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT +D VP A+C FQG LL G+G+ LR+YDLGK+KLLRKCENK
Sbjct: 928 LELVHKTPIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENK 975
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 93/123 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E VHKT +D VP A+C FQG LL G+G+ LR+YDLGK+KLLRKCENK+ PN I I
Sbjct: 925 GRSLELVHKTPIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENKNFPNTITSI 984
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
S G RIYV D+QES V+Y+R ENQL FADD+ PRW+T S +D++T+A+ DKFGN+
Sbjct: 985 HSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNL 1044
Query: 192 CIV 194
V
Sbjct: 1045 FFV 1047
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT +D VP A+C FQG LL G+G+ LR+YDLGK+KLLRKCENK
Sbjct: 928 LELVHKTPIDGVPTALCQFQGRLLAGIGQILRIYDLGKRKLLRKCENK 975
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 94/123 (76%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++ V+KT +E YAM PFQG L GVG+ +R+YD+GKKKLLRKCE K+LPN IV I
Sbjct: 950 GKKLQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIYDMGKKKLLRKCETKNLPNTIVNI 1009
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
S+G R+ V D+QES+ ++YK+ EN L +FADD PRWIT+S +LDY+TVA ADKFGN+
Sbjct: 1010 HSLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVMLDYDTVAGADKFGNI 1069
Query: 192 CIV 194
I+
Sbjct: 1070 FIL 1072
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
++ V+KT +E YAM PFQG L GVG+ +R+YD+GKKKLLRKCE K H
Sbjct: 953 LQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIYDMGKKKLLRKCETKNLPNTIVNIHSL 1012
Query: 61 HTHSGRSDRL-VGNAMEFVH 79
DRL VG+ E +H
Sbjct: 1013 ------GDRLVVGDIQESIH 1026
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 95/120 (79%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
++FVH+T V++VP AM PFQG LLVGVG LR+YDLGK+KLLRKCEN+ +PN + I +
Sbjct: 936 LDFVHRTEVEDVPGAMYPFQGRLLVGVGSLLRVYDLGKRKLLRKCENRSIPNFVSSITTS 995
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI V+DVQES +RY+ +N L +FADD+ PRW+T+S ++DY+TVA+ DKFGNV ++
Sbjct: 996 GGRIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYDTVAAGDKFGNVFVL 1055
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++FVH+T V++VP AM PFQG LLVGVG LR+YDLGK+KLLRKCEN+
Sbjct: 936 LDFVHRTEVEDVPGAMYPFQGRLLVGVGSLLRVYDLGKRKLLRKCENR 983
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 95/123 (77%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E ++KT V+E YAM FQG L+ GVG+ +R+YD+GKKKLLRKCE K+LPN IV I
Sbjct: 973 GKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKLLRKCETKNLPNTIVNI 1032
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
S+G R+ V D+QES+ ++YKR EN L +FADD PRW+T+S +LDY+TVA ADKFGN+
Sbjct: 1033 HSLGDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNI 1092
Query: 192 CIV 194
++
Sbjct: 1093 FVL 1095
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E ++KT V+E YAM FQG L+ GVG+ +R+YD+GKKKLLRKCE K H
Sbjct: 976 LELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKLLRKCETKNLPNTIVNIHSL 1035
Query: 61 HTHSGRSDRL-VGNAMEFVH 79
DRL VG+ E +H
Sbjct: 1036 ------GDRLVVGDIQESIH 1049
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 90/116 (77%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ F+HKT +D+VPYAM FQG LLVG G+ LR+YD+GKKK+LRKCE K +PN IV + +
Sbjct: 917 LHFIHKTPIDDVPYAMLAFQGRLLVGAGKSLRIYDIGKKKMLRKCETKSIPNCIVSLHTQ 976
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
GHR+ +DVQESV V YK +N+L++FADDT PRW+T S ++DY TVA DKFGN
Sbjct: 977 GHRVIATDVQESVHYVIYKHADNRLVVFADDTIPRWMTGSTMVDYETVAGGDKFGN 1032
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ F+HKT +D+VPYAM FQG LLVG G+ LR+YD+GKKK+LRKCE K
Sbjct: 917 LHFIHKTPIDDVPYAMLAFQGRLLVGAGKSLRIYDIGKKKMLRKCETK 964
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 97/122 (79%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + VH T +D++P+AMC FQG LLV VGR LR+YDLGKKK+LRKCEN++ P+++V++
Sbjct: 916 GMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENRNFPSILVEL 975
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RIY SD+ ES V+YK+ ENQL+IFADD PR+IT+S +LDY+T+ ADKFGNV
Sbjct: 976 KAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGADKFGNV 1035
Query: 192 CI 193
+
Sbjct: 1036 FV 1037
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
VH T +D++P+AMC FQG LLV VGR LR+YDLGKKK+LRKCEN+
Sbjct: 921 LVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENR 966
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 97/122 (79%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + VH T +D++P+AMC FQG LLV VGR LR+YDLGKKK+LRKCEN++ P+++V++
Sbjct: 916 GMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENRNFPSILVEL 975
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RIY SD+ ES V+YK+ ENQL+IFADD PR+IT+S +LDY+T+ ADKFGNV
Sbjct: 976 KAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGADKFGNV 1035
Query: 192 CI 193
+
Sbjct: 1036 FV 1037
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
VH T +D++P+AMC FQG LLV VGR LR+YDLGKKK+LRKCEN+
Sbjct: 921 LVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENR 966
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT VD+VP A+C FQG LL GVG LRLYDLGK+KLLRKCENK PN I I
Sbjct: 930 GKSLELLHKTQVDDVPLALCQFQGKLLAGVGSVLRLYDLGKRKLLRKCENKLFPNTITSI 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGN+
Sbjct: 990 HTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNI 1049
Query: 192 CIV 194
V
Sbjct: 1050 YFV 1052
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT VD+VP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ T
Sbjct: 933 LELLHKTQVDDVPLALCQFQGKLLAGVGSVLRLYDLGKRKLLRKCENKLFPNTI-----T 987
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 988 SIHTYRDRIYVGDIQESFH 1006
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN IV I
Sbjct: 931 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCENKLFPNSIVSI 990
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 991 HTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTASYHVDFDTMAGADKFGNI 1050
Query: 192 CIV 194
V
Sbjct: 1051 YFV 1053
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 934 LELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCENKLFPNSI-----V 988
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 989 SIHTYRDRIYVGDIQESFH 1007
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++EF+HKT VD+VP A+ FQG L+ G+G+ LR++D+GKK+LLRKCENK IV +
Sbjct: 925 GRSLEFLHKTEVDDVPLALLSFQGRLVAGIGKALRIFDMGKKRLLRKCENKSFATAIVTL 984
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+ ES++ YK EN+LLIFADD+QPRWIT S ++DY+TV + DKFGNV
Sbjct: 985 STQGSRIIVGDMAESIYFATYKPPENRLLIFADDSQPRWITASAMVDYDTVCAGDKFGNV 1044
Query: 192 CI 193
+
Sbjct: 1045 FV 1046
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT VD+VP A+ FQG L+ G+G+ LR++D+GKK+LLRKCEN K F A T
Sbjct: 928 LEFLHKTEVDDVPLALLSFQGRLVAGIGKALRIFDMGKKRLLRKCEN----KSFATAIVT 983
Query: 61 HTHSGRSDRLVGNAMEFVH 79
+ G S +VG+ E ++
Sbjct: 984 LSTQG-SRIIVGDMAESIY 1001
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT +D+VP A+ FQG L+ GVG+ LR+YD+GKKK+LRK ENK + IV +
Sbjct: 929 GRQLELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+F YK EN+LLIFADD+QPRWI+ + ++DYNTV +AD+FGN+
Sbjct: 989 STQGSRILVGDMQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNI 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E VHKT +D+VP A+ FQG L+ GVG+ LR+YD+GKKK+LRK EN K F A T
Sbjct: 932 LELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVEN----KQFGSAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFV 78
+ G S LVG+ E +
Sbjct: 988 LSTQG-SRILVGDMQESI 1004
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT +D+VP A+ FQG L+ GVG+ LR+YD+GKKK+LRK ENK + IV +
Sbjct: 929 GRQLELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+F YK EN+LLIFADD+QPRWI+ + ++DYNTV +AD+FGN+
Sbjct: 989 STQGSRILVGDMQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNI 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E VHKT +D+VP A+ FQG L+ GVG+ LR+YD+GKKK+LRK EN K F A T
Sbjct: 932 LELVHKTEIDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVEN----KQFGSAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFV 78
+ G S LVG+ E +
Sbjct: 988 LSTQG-SRILVGDMQESI 1004
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 91/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN IV I
Sbjct: 931 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T+S +D++++A ADKFGN+
Sbjct: 991 HTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTSSYHVDFDSMAGADKFGNI 1050
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 934 LELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKKRLLRKCENKL 982
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK PN IV I
Sbjct: 932 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKLFPNTIVSI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 992 HTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNI 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKL 983
>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
11827]
Length = 1243
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 89/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +E +HKT +DEVP A+ FQG L+ GVG+ LRLYD+GKKKLLRK EN+ IV +
Sbjct: 959 GSGLELLHKTDIDEVPTALMAFQGRLIAGVGKALRLYDIGKKKLLRKAENRQFATAIVTL 1018
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI D+ +S++ V YK EN+LLIFADDT RWIT S +LDYNTV +ADKFGNV
Sbjct: 1019 STQGSRILAGDINQSIYYVAYKAAENRLLIFADDTSARWITASTMLDYNTVVAADKFGNV 1078
Query: 192 CI 193
+
Sbjct: 1079 FV 1080
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT +DEVP A+ FQG L+ GVG+ LRLYD+GKKKLLRK EN+
Sbjct: 962 LELLHKTDIDEVPTALMAFQGRLIAGVGKALRLYDIGKKKLLRKAENR 1009
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK P +V I
Sbjct: 947 GRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTLVSI 1006
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+TT+ +D++T+A ADKFGN+
Sbjct: 1007 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTTAQHIDFDTMAGADKFGNI 1066
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 950 LELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTL-----V 1004
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1005 SIHTYRDRIYVGDMQESFH 1023
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK PN IV I
Sbjct: 891 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKLFPNTIVSI 950
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 951 HTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNI 1010
Query: 192 CIV 194
V
Sbjct: 1011 YFV 1013
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK+
Sbjct: 894 LELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKL 942
>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor FP-101664
SS1]
Length = 1213
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 89/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT +VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK ENK P IV +
Sbjct: 929 GRDLEFLHKTETSDVPLAVMAFQGKLIAGVGKSLRLYDVGKKKLLRKVENKGFPAAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QESVF YK EN+LL+FADD QPRW+T + +LDYNTV + D+FGNV
Sbjct: 989 NTQGSRIIVGDMQESVFYAVYKAPENRLLVFADDAQPRWVTATTMLDYNTVVAGDRFGNV 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT +VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK EN KGF A T
Sbjct: 932 LEFLHKTETSDVPLAVMAFQGKLIAGVGKSLRLYDVGKKKLLRKVEN----KGFPAAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFV 78
G S +VG+ E V
Sbjct: 988 LNTQG-SRIIVGDMQESV 1004
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 94/120 (78%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +HKT VD++P A+C FQG LLVGVGR LR+YDLGKKKLLRKCENK + I I+++
Sbjct: 933 LELLHKTPVDDIPGALCSFQGRLLVGVGRILRIYDLGKKKLLRKCENKKVSTFITGIDTI 992
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G+RI V D+Q+S ++YKR +NQL++FADD R++T C++DY+T+A ADKFGN+ V
Sbjct: 993 GYRIMVHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAGADKFGNIFFV 1052
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT VD++P A+C FQG LLVGVGR LR+YDLGKKKLLRKCENK
Sbjct: 933 LELLHKTPVDDIPGALCSFQGRLLVGVGRILRIYDLGKKKLLRKCENK 980
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN I+ I
Sbjct: 932 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ RIYV D+QES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGNV
Sbjct: 992 QTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNV 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 983
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK PN IV I
Sbjct: 652 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKLFPNTIVSI 711
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 712 HTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNI 771
Query: 192 CIV 194
V
Sbjct: 772 YFV 774
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK+
Sbjct: 655 LELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKL 703
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN I+ I
Sbjct: 351 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISI 410
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ RIYV D+QES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGNV
Sbjct: 411 QTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNV 470
Query: 192 CIV 194
V
Sbjct: 471 YFV 473
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 354 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 402
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 952 GRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 1011
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 1012 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 1071
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 955 LELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 1009
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1010 SIHTYRDRIYVGDMQESFH 1028
>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN I+ I
Sbjct: 172 GKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISI 231
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ RIYV D+QES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGNV
Sbjct: 232 QTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNV 291
Query: 192 CIV 194
V
Sbjct: 292 YFV 294
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 175 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 223
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 942 GRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 1001
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 1002 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 1061
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 945 LELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 999
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1000 SIHTYRDRIYVGDMQESFH 1018
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 950 GRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 1009
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 1010 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAQHIDFDTMAGADKFGNI 1069
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 953 LELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 1007
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1008 SIHTYRDRIYVGDMQESFH 1026
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii str.
Neff]
Length = 1227
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G VHKT V+ VP A+C FQG LLVG+G+ LR+YDLGK+KLLRKCENK P+ I I
Sbjct: 946 GKRFSLVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIYDLGKRKLLRKCENKGFPHCIQSI 1005
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+ ES V+Y++ ENQL ++ADD+ PRW+T S +LDY+T+A ADKFGNV
Sbjct: 1006 TTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTMAGADKFGNV 1065
Query: 192 CIV 194
IV
Sbjct: 1066 FIV 1068
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT 62
VHKT V+ VP A+C FQG LLVG+G+ LR+YDLGK+KLLRKCEN KGF Q+ T
Sbjct: 951 LVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIYDLGKRKLLRKCEN----KGFPHCIQSIT 1006
Query: 63 HSGRSDRLVGNAMEFVH 79
G +VG+ E H
Sbjct: 1007 TQGER-IIVGDLAESFH 1022
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 563 GRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 622
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 623 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 682
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP A+C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 566 LELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 620
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 621 SIHTYRDRIYVGDMQESFH 639
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 98/143 (68%), Gaps = 4/143 (2%)
Query: 52 KGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLG 111
+ F+KA+ T G G +E VHKT VD+VP + FQG LL GVG+ LR+Y+LG
Sbjct: 985 RSFKKAYLTTYRLGNG----GRELEVVHKTEVDDVPLVLRAFQGRLLAGVGKVLRIYELG 1040
Query: 112 KKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171
KKKLLRKCEN+ P IV +++ G RI V D+QESV YK EN+L+ FADD PR++
Sbjct: 1041 KKKLLRKCENRSFPTAIVALDAQGSRIVVGDMQESVIFASYKPLENRLVTFADDIMPRYV 1100
Query: 172 TTSCVLDYNTVASADKFGNVCIV 194
T +LDY+TVA+ADKFGNV +V
Sbjct: 1101 TRCTMLDYDTVAAADKFGNVYVV 1123
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VD+VP + FQG LL GVG+ LR+Y+LGKKKLLRKCEN+
Sbjct: 1004 LEVVHKTEVDDVPLVLRAFQGRLLAGVGKVLRIYELGKKKLLRKCENR 1051
>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora B]
Length = 1213
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 90/122 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT ++VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK IV +
Sbjct: 929 GQNLELLHKTETNDVPLAVMAFQGKLVAGVGKSLRIYDMGKKKLLRKVENKTFSAAIVAL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G IYV D+QESVF YK EN+LL+FADDTQPRWIT ++DYNTVA+AD+FGNV
Sbjct: 989 HTQGSHIYVGDMQESVFYAVYKAPENRLLVFADDTQPRWITAMTMIDYNTVAAADRFGNV 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT ++VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK H
Sbjct: 932 LELLHKTETNDVPLAVMAFQGKLVAGVGKSLRIYDMGKKKLLRKVENKTFSAAIVALHTQ 991
Query: 61 HTH 63
+H
Sbjct: 992 GSH 994
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK PN IV I
Sbjct: 932 GRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKLFPNTIVSI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV DVQES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGN+
Sbjct: 992 HAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNI 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKL 983
>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
Length = 1153
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 91/123 (73%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G ++E +HKT +D+VP ++ FQG +VGVGR LRLY +GK +LLRK ENK P +V
Sbjct: 868 AGRSLELLHKTELDDVPLSIAAFQGRAVVGVGRALRLYTMGKSRLLRKSENKSFPAAVVS 927
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
++ G RIY SD Q+SV+ V YK +N+LLIFADDTQ RWIT + V+DY+TVAS DKFGN
Sbjct: 928 LQVQGSRIYASDAQDSVYFVAYKAADNRLLIFADDTQQRWITCNTVVDYDTVASGDKFGN 987
Query: 191 VCI 193
V +
Sbjct: 988 VFV 990
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT +D+VP ++ FQG +VGVGR LRLY +GK +LLRK ENK
Sbjct: 872 LELLHKTELDDVPLSIAAFQGRAVVGVGRALRLYTMGKSRLLRKSENK 919
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 946 GKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 1005
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 1006 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 1065
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 949 LELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 1003
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1004 SIHTYRDRIYVGDMQESFH 1022
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 945 GKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 1004
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 1005 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 1064
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 948 LELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 1002
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 1003 SIHTYRDRIYVGDMQESFH 1021
>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK P IV I
Sbjct: 424 GKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSI 483
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T + +D++T+A ADKFGN+
Sbjct: 484 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNI 543
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT V+EVP ++C FQG LL GVG LRLYDLGK+KLLRKCENK+ +
Sbjct: 427 LELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI-----V 481
Query: 61 HTHSGRSDRLVGNAMEFVH 79
H+ R VG+ E H
Sbjct: 482 SIHTYRDRIYVGDMQESFH 500
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G A+E +HKT V+ VP A+ FQG LL G+G LRLYDLGKK+LLRKCENK PN IV I
Sbjct: 932 GRALELLHKTQVEGVPLALSQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNSIVSI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ RIYV D+QES +Y+R ENQL IFADD PRW+T S +D++T+A ADKFGN+
Sbjct: 992 QTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNI 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+ FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALSQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 983
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 89/123 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK PN I+ I
Sbjct: 932 GRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV DVQES +Y+R ENQL IFADD PRW+T S +D++T+A DKFGN+
Sbjct: 992 HAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGTDKFGNI 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGKK+LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 983
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 90/122 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF HKT VD+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK + IV +
Sbjct: 929 GAGLEFQHKTEVDDVPLALLAFQGRLVAGVGKALRIYDIGKKKLLRKVENKTFSSAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+ YK EN+LL+FADD+QPRWIT S ++DYNT+ + D+FGN+
Sbjct: 989 STQGSRIIVGDMQESIQFAVYKPPENRLLVFADDSQPRWITASSMVDYNTIVAGDRFGNI 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF HKT VD+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK F A T
Sbjct: 932 LEFQHKTEVDDVPLALLAFQGRLVAGVGKALRIYDIGKKKLLRKVENKT----FSSAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFVH 79
+ G S +VG+ E +
Sbjct: 988 LSTQG-SRIIVGDMQESIQ 1005
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+ FQG LL G+G LRLYDLGK++LLRKCENK PN IV I
Sbjct: 932 GKSLELLHKTQVEGVPLALAQFQGRLLAGLGSVLRLYDLGKRRLLRKCENKLFPNTIVSI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 992 QTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHVDFDTMAGADKFGNI 1051
Query: 192 CIV 194
V
Sbjct: 1052 YFV 1054
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+ FQG LL G+G LRLYDLGK++LLRKCENK+
Sbjct: 935 LELLHKTQVEGVPLALAQFQGRLLAGLGSVLRLYDLGKRRLLRKCENKL 983
>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens LYAD-421
SS1]
Length = 1213
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 91/122 (74%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT ++VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK ENK L + IV +
Sbjct: 929 GRNLELLHKTETNDVPLAIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKTLGSTIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI + D+QESVF YK EN+LL+FADD QPRW+T + +LDYNTV ++D+FGNV
Sbjct: 989 NTQGSRIIIGDMQESVFYAVYKPPENRLLVFADDVQPRWVTATTMLDYNTVVASDRFGNV 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT ++VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK ENK
Sbjct: 932 LELLHKTETNDVPLAIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKT 980
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 91/124 (73%), Gaps = 5/124 (4%)
Query: 60 THTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 119
T+T S DRL E +H+T+VDE A+ F+G LL G+ LR+YDLGKKKLLRKC
Sbjct: 961 TYTISALGDRL-----EMMHRTTVDEAVTALASFRGRLLASAGKMLRIYDLGKKKLLRKC 1015
Query: 120 ENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY 179
ENKH+PNLI I +MGHRI+V DVQESVF RYK ENQL++FADDT R+ + C+LDY
Sbjct: 1016 ENKHMPNLITHILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDY 1075
Query: 180 NTVA 183
+TVA
Sbjct: 1076 DTVA 1079
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +H+T+VDE A+ F+G LL G+ LR+YDLGKKKLLRKCENK
Sbjct: 971 LEMMHRTTVDEAVTALASFRGRLLASAGKMLRIYDLGKKKLLRKCENK 1018
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 33 LYDLGKKKLLRKCENKVRI--KGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAM 90
++ G+ L C V++ +GF A H + + G + VH T D +P+A+
Sbjct: 871 MFQEGEVMLAVGCAKDVQLQPRGFSSA-SIHLYQFVEN---GQKLALVHTTETDLIPHAV 926
Query: 91 CPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLV 150
FQG L+ GVG LRLY+LGKKKLLRKCEN+ +PN I I+S G RI VSDVQESV
Sbjct: 927 GSFQGKLIAGVGNVLRLYELGKKKLLRKCENRKVPNQITSIQSQGDRIVVSDVQESVHFF 986
Query: 151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
Y+R EN L++FADDT PR++T+ +LD++TVA ADKFG + +V
Sbjct: 987 TYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGTIAVV 1030
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+ VH T D +P+A+ FQG L+ GVG LRLY+LGKKKLLRKCEN+ + +Q
Sbjct: 911 LALVHTTETDLIPHAVGSFQGKLIAGVGNVLRLYELGKKKLLRKCENR------KVPNQI 964
Query: 61 HTHSGRSDRL-VGNAMEFVH 79
+ + DR+ V + E VH
Sbjct: 965 TSIQSQGDRIVVSDVQESVH 984
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
JAM81]
Length = 1213
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 89/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++EF+HKT + +P MC FQG LLVGVG LR+YDLGKKK+LRKCE K P IV +
Sbjct: 930 GTSLEFLHKTPIKGIPKVMCSFQGRLLVGVGSLLRIYDLGKKKMLRKCECKGFPTTIVTL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G+RI + D QESV Y+ ++N+++IFADDT PRW+T +C++DY+TV DK GN+
Sbjct: 990 HTQGNRIILGDAQESVHYAMYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDKMGNI 1049
Query: 192 CI 193
+
Sbjct: 1050 FV 1051
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EF+HKT + +P MC FQG LLVGVG LR+YDLGKKK+LRKCE KGF T
Sbjct: 933 LEFLHKTPIKGIPKVMCSFQGRLLVGVGSLLRIYDLGKKKMLRKCE----CKGFPTTIVT 988
Query: 61 -HTHSGRSDRLVGNAMEFVH 79
HT R ++G+A E VH
Sbjct: 989 LHTQGNRI--ILGDAQESVH 1006
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 93/123 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+H+T DEV A+ F+G LVGVG+ +RLYDLGKKKLL KCENK LP +V I
Sbjct: 931 GSKLEFLHRTPTDEVVNAVHDFRGMALVGVGKKIRLYDLGKKKLLAKCENKQLPVQVVDI 990
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
SMG RI VSD QES+ +RYK+ +NQL IF DDT PR++T C+LDY+TVA D+FG++
Sbjct: 991 RSMGQRIVVSDSQESLHFMRYKKQDNQLSIFCDDTSPRFVTCICILDYDTVAVGDRFGSI 1050
Query: 192 CIV 194
++
Sbjct: 1051 AVL 1053
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T DEV A+ F+G LVGVG+ +RLYDLGKKKLL KCENK
Sbjct: 934 LEFLHRTPTDEVVNAVHDFRGMALVGVGKKIRLYDLGKKKLLAKCENK 981
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 101/146 (69%), Gaps = 10/146 (6%)
Query: 52 KGFRKAHQTH---THSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLY 108
+ F+KA+ T T++GR +E +HKT VD++P + PFQG LL G+G+ LR+Y
Sbjct: 921 RSFKKAYLTTYRLTNNGRE-------LEVLHKTEVDDIPLVLRPFQGRLLAGIGKALRIY 973
Query: 109 DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168
DLGKKKLLRKCENK IV +++ G RI V D+QES+ YK EN+L+ FADD P
Sbjct: 974 DLGKKKLLRKCENKSFATAIVSLDAQGSRIVVGDMQESIIFTSYKPLENRLVTFADDVMP 1033
Query: 169 RWITTSCVLDYNTVASADKFGNVCIV 194
+++T +LDY+TVA+ADKFGNV ++
Sbjct: 1034 KFVTRCAMLDYDTVAAADKFGNVYVL 1059
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT VD++P + PFQG LL G+G+ LR+YDLGKKKLLRKCENK
Sbjct: 940 LEVLHKTEVDDIPLVLRPFQGRLLAGIGKALRIYDLGKKKLLRKCENK 987
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 85/121 (70%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+E HKT +D VP AMC F+G LLVGVG LRLYD GKKKLLRK EN++ PN I I
Sbjct: 918 GGIELFHKTPLDGVPGAMCGFKGRLLVGVGNTLRLYDFGKKKLLRKVENRNFPNFIKTIH 977
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ G RIYV DVQES VRYKR + + I ADD QPR +T +C LDY+T+A D+FGNV
Sbjct: 978 AQGERIYVGDVQESFHYVRYKREDGSMYIVADDVQPRHVTAACPLDYDTIAGGDRFGNVF 1037
Query: 193 I 193
+
Sbjct: 1038 V 1038
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 37/48 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E HKT +D VP AMC F+G LLVGVG LRLYD GKKKLLRK EN+
Sbjct: 920 IELFHKTPLDGVPGAMCGFKGRLLVGVGNTLRLYDFGKKKLLRKVENR 967
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 24/189 (12%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
SV VP+A Q L+VG + + + F+KA+ T +
Sbjct: 893 SVAIVPFASAEKQSFLVVG----------------SAVDVVLSPRSFKKAYLT------T 930
Query: 68 DRLV--GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLP 125
RL+ G +E HKT +D++P + PFQG LL GVG+ LR+YDLGKKKLLRKCENK P
Sbjct: 931 YRLINGGRELEVHHKTEIDDIPLVLRPFQGRLLAGVGKALRIYDLGKKKLLRKCENKSFP 990
Query: 126 NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
IV +++ G RI V D+QES+ YK EN+L+ FADD P+++T +LDY+TVA+A
Sbjct: 991 TAIVSLDAQGSRIVVGDMQESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAA 1050
Query: 186 DKFGNVCIV 194
DKFGN+ ++
Sbjct: 1051 DKFGNLYVL 1059
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E HKT +D++P + PFQG LL GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 940 LEVHHKTEIDDIPLVLRPFQGRLLAGVGKALRIYDLGKKKLLRKCENK 987
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 89/120 (74%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK P IV I
Sbjct: 943 GRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKSFPISIVSI 1002
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV D+QES +Y+R ENQL IFADD+ PRW+T S +D++T+A ADKFGN+
Sbjct: 1003 HAYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNI 1062
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK
Sbjct: 946 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENK 993
>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
Length = 1185
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G E++H T ++ P A+ PFQG +L+GVG LR+YDLGKKK+LRKCE + +PN + K
Sbjct: 901 AGERFEYLHTTYTEDAPTAITPFQGRVLIGVGNLLRIYDLGKKKMLRKCELRSIPNRVTK 960
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
I + G RI D QES F ++Y+ ENQL IFADDT PRW+T +C+LDY TV ADKFG+
Sbjct: 961 IITAGQRIIAFDQQESAFFIKYRVKENQLTIFADDTFPRWVTAACMLDYWTVVIADKFGS 1020
Query: 191 VCIV 194
V ++
Sbjct: 1021 VSVI 1024
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
E++H T ++ P A+ PFQG +L+GVG LR+YDLGKKK+LRKCE
Sbjct: 905 FEYLHTTYTEDAPTAITPFQGRVLIGVGNLLRIYDLGKKKMLRKCE 950
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 91/120 (75%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
++FVH+T V+ +P A+ PF G L+ GVG +R+YD+G+KKLLRKCENKHLP+ +V IE M
Sbjct: 952 LDFVHRTEVEAMPCALTPFAGRLIAGVGNIVRIYDMGRKKLLRKCENKHLPSRVVDIEVM 1011
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G R+ V+D +ESVF ++YK EN L +F DDT PRW T ++DY+TV ADKFGNV ++
Sbjct: 1012 GTRVVVADQRESVFFLKYKPTENVLSVFCDDTTPRWCTAMLMVDYSTVCVADKFGNVSVL 1071
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++FVH+T V+ +P A+ PF G L+ GVG +R+YD+G+KKLLRKCENK
Sbjct: 952 LDFVHRTEVEAMPCALTPFAGRLIAGVGNIVRIYDMGRKKLLRKCENK 999
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 90/120 (75%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK P+ IV I
Sbjct: 943 GRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKSFPSSIVSI 1002
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIYV +QES +Y+R ENQL IFADD+ PRW+T+S +D++T+A ADKFGN+
Sbjct: 1003 HAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYHIDFDTMAGADKFGNI 1062
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT V+ VP A+C FQG LL G+G LRLYDLGK++LLRKCENK
Sbjct: 946 LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENK 993
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 89/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT ++VP A+ FQG L G+G+ LR+YD+GKKKLLRK E+K+ N IV +
Sbjct: 929 GRDIELLHKTETNDVPLAIMAFQGRLAAGIGKALRIYDIGKKKLLRKVESKNFSNAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+F YK EN+LLIFADD QPRWIT ++DYNTVA+ D+FGNV
Sbjct: 989 NTQGSRIIVGDMQESIFYAVYKPPENRLLIFADDAQPRWITAVTMIDYNTVAAGDRFGNV 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT ++VP A+ FQG L G+G+ LR+YD+GKKKLLRK E+ K F A T
Sbjct: 932 IELLHKTETNDVPLAIMAFQGRLAAGIGKALRIYDIGKKKLLRKVES----KNFSNAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFV 78
G S +VG+ E +
Sbjct: 988 LNTQG-SRIIVGDMQESI 1004
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 86/119 (72%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
++ +HKT V++VPYA+ F+G LLVGV LR+YDLGKKKLLRKCENK PN I I
Sbjct: 935 LQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIYDLGKKKLLRKCENKSFPNFITSIAVD 994
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G+RI+V D+ ES V++ EN L IFAD+T PRW+T S ++D+NT+A DKFGN I
Sbjct: 995 GNRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDHNTIAGGDKFGNFFI 1053
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +HKT V++VPYA+ F+G LLVGV LR+YDLGKKKLLRKCENK
Sbjct: 935 LQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIYDLGKKKLLRKCENK 982
>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
Length = 1220
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 12 VPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR 69
V ++ P + +LVG G L ++D+ N I+ R T S DR
Sbjct: 888 VQFSKHPNEAMVLVGCGVNEVLNVHDIDP--------NDTSIRPTRGCVYTFHLSANGDR 939
Query: 70 LVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIV 129
+F+H+T A+ F+G LVG GR+LR+YD+G+KKLL KCENK+ P IV
Sbjct: 940 F-----DFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENKNFPVSIV 994
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
I+S G RI VSD QESV +RY++ +NQL++FADDT PR++T CVLDY+TVA ADKFG
Sbjct: 995 NIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHTVAVADKFG 1054
Query: 190 NVCIV 194
N+ +V
Sbjct: 1055 NLAVV 1059
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+F+H+T A+ F+G LVG GR+LR+YD+G+KKLL KCENK
Sbjct: 940 FDFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENK 987
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 87/120 (72%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +HKT +D+VPYA+ F+G LL GVG+ LRLYDLGKK+LLRKCENK IV + +
Sbjct: 928 LELLHKTDIDDVPYAIHAFKGRLLAGVGKALRLYDLGKKRLLRKCENKSFAAGIVNLNVV 987
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RIYV D+QESV YK EN+LL+FADD RW TT+ +DY+TVA DKFGN+ I
Sbjct: 988 GSRIYVGDMQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVAGGDKFGNIFIT 1047
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
+E +HKT +D+VPYA+ F+G LL GVG+ LRLYDLGKK+LLRKCENK G
Sbjct: 928 LELLHKTDIDDVPYAIHAFKGRLLAGVGKALRLYDLGKKRLLRKCENKSFAAGI 981
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 89/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT ++VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK ENK + IV +
Sbjct: 928 GTNLELLHKTETNDVPLAVLGFQGRLVAGVGKALRLYDMGKKKLLRKVENKTFASAIVSL 987
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QESV YK EN+LL+FADDTQPRW + ++DYNTVASAD+FGN+
Sbjct: 988 ATQGSRILVGDMQESVSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFGNI 1047
Query: 192 CI 193
+
Sbjct: 1048 YV 1049
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT ++VP A+ FQG L+ GVG+ LRLYD+GKKKLLRK ENK F A +
Sbjct: 931 LELLHKTETNDVPLAVLGFQGRLVAGVGKALRLYDMGKKKLLRKVENKT----FASAIVS 986
Query: 61 HTHSGRSDRLVGNAMEFV 78
G S LVG+ E V
Sbjct: 987 LATQG-SRILVGDMQESV 1003
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 97/124 (78%), Gaps = 1/124 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+H+T VD+ P A+C FQG LLVGVG LR+YDLGKKKLL+KCENKH+P LI I
Sbjct: 905 GERLEFLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENKHIPTLINGI 964
Query: 132 ESMGHRIYVSDVQESVFLVRYK-RYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
S+G RI V+DVQESV VRY+ R ++QL+IFADDT PRWI VLD +TVA +DKFGN
Sbjct: 965 YSVGSRIIVTDVQESVHWVRYRPRSDSQLVIFADDTNPRWIIHLAVLDASTVAVSDKFGN 1024
Query: 191 VCIV 194
V I+
Sbjct: 1025 VTIL 1028
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T VD+ P A+C FQG LLVGVG LR+YDLGKKKLL+KCENK
Sbjct: 908 LEFLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENK 955
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 87/122 (71%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT D+VP A+ FQG L GVG+ LR+YD+GKKKLLRK ENK IV +
Sbjct: 929 GTGLELLHKTETDDVPMALLAFQGRLAAGVGKALRIYDIGKKKLLRKVENKSFTTAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QESV V YK+ EN+LL FADDTQPRW+T ++DYNT+ + D+FGN+
Sbjct: 989 TTQGSRILVGDMQESVQYVVYKQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNI 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT D+VP A+ FQG L GVG+ LR+YD+GKKKLLRK EN K F A T
Sbjct: 932 LELLHKTETDDVPMALLAFQGRLAAGVGKALRIYDIGKKKLLRKVEN----KSFTTAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFVH 79
T G S LVG+ E V
Sbjct: 988 LTTQG-SRILVGDMQESVQ 1005
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 90/122 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E VHKT VD++P A+ FQG LL G+G+ LR+Y++G KK LRKCE + +PN IV++
Sbjct: 914 GKSIELVHKTEVDDIPLALLGFQGRLLAGLGKMLRIYEMGMKKCLRKCEVRAVPNCIVQL 973
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI ++D+QES+ YK EN+L++FADD PRW TTS +LDY TVA+ DKFGN
Sbjct: 974 HTQGSRIIIADIQESIHFAVYKYLENRLIVFADDVIPRWTTTSTMLDYETVAAGDKFGNF 1033
Query: 192 CI 193
I
Sbjct: 1034 WI 1035
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+E VHKT VD++P A+ FQG LL G+G+ LR+Y++G KK LRKCE
Sbjct: 917 IELVHKTEVDDIPLALLGFQGRLLAGLGKMLRIYEMGMKKCLRKCE 962
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 85/119 (71%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT VD++P A+ FQG L+ GVG+ LRLYDLGKKKLLRK ENK +I+ +
Sbjct: 930 GRQLELLHKTEVDDIPKALIAFQGRLVAGVGKALRLYDLGKKKLLRKAENKGFATMIMTL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+ G RI V D QESV+ YK EN+LLIFADD PRW T S ++DY TVA+ DKFGN
Sbjct: 990 NTQGTRIIVGDAQESVYYALYKAPENRLLIFADDISPRWTTASIMVDYETVAAGDKFGN 1048
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT VD++P A+ FQG L+ GVG+ LRLYDLGKKKLLRK EN KGF T
Sbjct: 933 LELLHKTEVDDIPKALIAFQGRLVAGVGKALRLYDLGKKKLLRKAEN----KGFATMIMT 988
Query: 61 HTHSGRSDRLVGNAMEFVH 79
G + +VG+A E V+
Sbjct: 989 LNTQG-TRIIVGDAQESVY 1006
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT VD++P + FQG LL G+G+ LR+YDLGKKKLLRKCEN+ P +V +
Sbjct: 937 GRELELLHKTEVDDIPLVLRAFQGRLLAGIGKALRIYDLGKKKLLRKCENRSFPTAVVSL 996
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI V D+QES+ YK EN+L+ FADD P+++T +LDY+TVA+ADKFGN+
Sbjct: 997 DAQGSRIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNI 1056
Query: 192 CIV 194
++
Sbjct: 1057 YVL 1059
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +HKT VD++P + FQG LL G+G+ LR+YDLGKKKLLRKCEN+
Sbjct: 940 LELLHKTEVDDIPLVLRAFQGRLLAGIGKALRIYDLGKKKLLRKCENR 987
>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana RWD-64-598
SS2]
Length = 1213
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 87/122 (71%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++E +HKT D+VP A+ FQG L+ GVG+ LRLY++GKKKLLRK ENK + IV +
Sbjct: 929 GRSLELLHKTETDDVPLAVMAFQGRLIAGVGKSLRLYEIGKKKLLRKAENKSFASAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QESV YK EN+LLIFADD QPRW+T ++DY T+A D+FGNV
Sbjct: 989 NTQGSRIIVGDMQESVHFAAYKAPENRLLIFADDMQPRWVTALTMVDYTTIAVGDRFGNV 1048
Query: 192 CI 193
I
Sbjct: 1049 FI 1050
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT D+VP A+ FQG L+ GVG+ LRLY++GKKKLLRK EN K F A T
Sbjct: 932 LELLHKTETDDVPLAVMAFQGRLIAGVGKSLRLYEIGKKKLLRKAEN----KSFASAIVT 987
Query: 61 HTHSGRSDRLVGNAMEFVH 79
G S +VG+ E VH
Sbjct: 988 LNTQG-SRIIVGDMQESVH 1005
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 91/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ + VH T VD +PYAM FQG LLV VG+ LR+YDLGK+KLLRKCEN++ + ++ +
Sbjct: 1363 GSQLVLVHTTPVDGIPYAMIEFQGRLLVSVGKVLRIYDLGKRKLLRKCENRYFTSPMIDL 1422
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G RIY SDV ES+ V+YK +NQL+ FADD P ++T+S +LDY+T+A DKFGNV
Sbjct: 1423 KSAGDRIYASDVHESIHFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGNV 1482
Query: 192 CIV 194
+
Sbjct: 1483 FVT 1485
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
VH T VD +PYAM FQG LLV VG+ LR+YDLGK+KLLRKCEN+
Sbjct: 1368 LVHTTPVDGIPYAMIEFQGRLLVSVGKVLRIYDLGKRKLLRKCENR 1413
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT D+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK IV +
Sbjct: 928 GAGLELLHKTETDDVPMAVMAFQGRLVAGVGKSLRIYDIGKKKLLRKVENKSFATAIVTL 987
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+ YK EN+LL+FADD QPRWI++S ++DYNTV + D+FGNV
Sbjct: 988 ATQGSRILVGDMQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDRFGNV 1047
Query: 192 CI 193
+
Sbjct: 1048 FV 1049
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT D+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK EN K F A T
Sbjct: 931 LELLHKTETDDVPMAVMAFQGRLVAGVGKSLRIYDIGKKKLLRKVEN----KSFATAIVT 986
Query: 61 HTHSGRSDRLVGNAME 76
G S LVG+ E
Sbjct: 987 LATQG-SRILVGDMQE 1001
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH---LPNLI 128
G +E +HKT D+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK I
Sbjct: 929 GTGLELLHKTETDDVPLALMAFQGRLVAGVGKALRIYDIGKKKLLRKVENKARATFSTAI 988
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
V + + G RI V D+QES+ V YK EN+LL+FADD QPRWIT + ++DY T+A+ D+F
Sbjct: 989 VTLNTQGSRIIVGDMQESISFVAYKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRF 1048
Query: 189 GNVCI 193
GN+ +
Sbjct: 1049 GNIFV 1053
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT D+VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK R F A T
Sbjct: 932 LELLHKTETDDVPLALMAFQGRLVAGVGKALRIYDIGKKKLLRKVENKARAT-FSTAIVT 990
Query: 61 HTHSGRSDRLVGNAMEFV 78
G S +VG+ E +
Sbjct: 991 LNTQG-SRIIVGDMQESI 1007
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 84/118 (71%)
Query: 77 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH 136
VHKT +D VP AMC F+G LL+G G LRLYD GKKKLLRK EN++ PN I + + G
Sbjct: 938 LVHKTPLDGVPGAMCGFKGRLLLGCGNALRLYDFGKKKLLRKVENRNFPNFITTVHASGD 997
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
RIYV DVQES V+YKR + L+I ADD QPR IT + LDY+T+A ADKFGNV +
Sbjct: 998 RIYVGDVQESFHFVKYKREDLSLIIVADDVQPRHITAALPLDYDTMAGADKFGNVFVA 1055
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT 62
VHKT +D VP AMC F+G LL+G G LRLYD GKKKLLRK EN+ H +
Sbjct: 938 LVHKTPLDGVPGAMCGFKGRLLLGCGNALRLYDFGKKKLLRKVENRNFPNFITTVHAS-- 995
Query: 63 HSGRSDRL-VGNAMEFVH 79
DR+ VG+ E H
Sbjct: 996 ----GDRIYVGDVQESFH 1009
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 94/126 (74%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI 128
R++ N + +HKT V +VP AM FQG LLVGVG+ LR+YDLG+KKLLRKCENK +P+++
Sbjct: 972 RILENRLVLLHKTEVPDVPLAMKEFQGRLLVGVGQSLRMYDLGRKKLLRKCENKRMPSMV 1031
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
V + G R++ D ES +Y+R EN+L+ FADD PR++T +C+LDY+++A ADKF
Sbjct: 1032 VSLTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYDSIAGADKF 1091
Query: 189 GNVCIV 194
GN+ ++
Sbjct: 1092 GNIFVL 1097
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 38/46 (82%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+HKT V +VP AM FQG LLVGVG+ LR+YDLG+KKLLRKCENK
Sbjct: 980 LLHKTEVPDVPLAMKEFQGRLLVGVGQSLRMYDLGRKKLLRKCENK 1025
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
Length = 1221
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 72 GNAMEFVHKTSVDE-VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G +E VHKT VD VP A+C F+G LL GVG LRLYD+GKKKLLRKCE LP+ I+
Sbjct: 938 GKRLELVHKTIVDGGVPGALCGFKGRLLAGVGPTLRLYDMGKKKLLRKCEYNRLPHQIMN 997
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
I G RIYV D QESV ++RYK+ +N IFADD PR++TT LDY+T+A+ DKFGN
Sbjct: 998 ITVQGPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDTLAAGDKFGN 1057
Query: 191 VCIVSTYRE 199
++ RE
Sbjct: 1058 FVVLRLPRE 1066
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
Query: 1 MEFVHKTSVDE-VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQ 59
+E VHKT VD VP A+C F+G LL GVG LRLYD+GKKKLLRKCE R HQ
Sbjct: 941 LELVHKTIVDGGVPGALCGFKGRLLAGVGPTLRLYDMGKKKLLRKCEYN------RLPHQ 994
Query: 60 THTHSGRSDRL-VGNAMEFVH 79
+ + R+ VG+A E VH
Sbjct: 995 IMNITVQGPRIYVGDAQESVH 1015
>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
Length = 1213
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 86/122 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E HKT D+VP A+ FQG L GVG+ LR+YD+GKKKLLRK ENK IV +
Sbjct: 929 GAGLELHHKTETDDVPLALLAFQGRLAAGVGKALRIYDIGKKKLLRKAENKGFGTTIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI D+QES+F YK EN+LL+FADD+QPRWI+ + ++DY TVA+ D+FGNV
Sbjct: 989 NTQGSRIIAGDMQESLFYAVYKAPENRLLVFADDSQPRWISAATMVDYYTVAAGDRFGNV 1048
Query: 192 CI 193
+
Sbjct: 1049 FV 1050
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E HKT D+VP A+ FQG L GVG+ LR+YD+GKKKLLRK ENK
Sbjct: 932 LELHHKTETDDVPLALLAFQGRLAAGVGKALRIYDIGKKKLLRKAENK 979
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++ +H+T+ DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+ +P +V I
Sbjct: 914 GTTLQLLHRTATDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENRQIPTQVVDI 973
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
SMG RI VSD QESV +RYK+ + QL IF D+T PR++T C+LDY+TVA D+FGN+
Sbjct: 974 RSMGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNI 1033
Query: 192 CIV 194
++
Sbjct: 1034 AVL 1036
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +H+T+ DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+
Sbjct: 917 LQLLHRTATDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENR 964
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
SV VP++ + L+VG G+ + +Y C GF H + +
Sbjct: 882 SVAAVPFSSQDDETFLVVGTGKDMVVYPPSSS-----C-------GF-----IHIYRFQE 924
Query: 68 DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
D G +EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ + +P L
Sbjct: 925 D---GKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRL 981
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
IV +++ G RI VSDVQESV V YK EN+L+ FADD RW T + ++DY TVA DK
Sbjct: 982 IVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDK 1041
Query: 188 FGNVCIV 194
FGN+ ++
Sbjct: 1042 FGNLWLL 1048
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEV 977
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
SV VP++ + L+VG G+ + +Y C GF H + +
Sbjct: 882 SVAAVPFSSQDDETFLVVGTGKDMVVYPPSSS-----C-------GF-----IHIYRFQE 924
Query: 68 DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
D G +EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ + +P L
Sbjct: 925 D---GKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRL 981
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
IV +++ G RI VSDVQESV V YK EN+L+ FADD RW T + ++DY TVA DK
Sbjct: 982 IVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDK 1041
Query: 188 FGNVCIV 194
FGN+ ++
Sbjct: 1042 FGNLWLL 1048
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEV 977
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 89/123 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++ +H+T DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+ +P +V I
Sbjct: 898 GTTLQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENRQIPTQVVDI 957
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
SMG RI VSD QESV +RYK+ + QL IF D+T PR++T C+LDY+TVA D+FGNV
Sbjct: 958 RSMGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNV 1017
Query: 192 CIV 194
++
Sbjct: 1018 AVL 1020
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +H+T DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+
Sbjct: 901 LQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENR 948
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
SV VP++ + L+VG G+ + +Y C GF H + +
Sbjct: 882 SVAAVPFSSQDDETFLVVGTGKDMVVYPPSSS-----C-------GF-----IHIYRFQE 924
Query: 68 DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
D G +EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ + +P L
Sbjct: 925 D---GKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRL 981
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
IV +++ G RI VSDVQESV V YK EN+L+ FADD RW T + ++DY TVA DK
Sbjct: 982 IVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDK 1041
Query: 188 FGNVCIV 194
FGN+ ++
Sbjct: 1042 FGNLWLL 1048
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEV 977
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 20/187 (10%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
SV VP++ + L+VG G+ + +Y C GF H + +
Sbjct: 643 SVAAVPFSSQDDETFLVVGTGKDMVVYPPSSS-----C-------GF-----IHIYRFQE 685
Query: 68 DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
D G +EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ + +P L
Sbjct: 686 D---GKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRL 742
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
IV +++ G RI VSDVQESV V YK EN+L+ FADD RW T + ++DY TVA DK
Sbjct: 743 IVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDK 802
Query: 188 FGNVCIV 194
FGN+ ++
Sbjct: 803 FGNLWLL 809
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+ P+A+ FQG LL G+GR LR+YDLG K+LLRKC+ +V
Sbjct: 690 LEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEV 738
>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 1209
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 88/123 (71%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E P A+ FQG L+ G+G+ LR+YDLG K++LRKC+ + +PNLIV +
Sbjct: 926 GRELEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRIYDLGMKQMLRKCQVEAVPNLIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK ENQL+ F DD RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF+HKT ++E P A+ FQG L+ G+G+ LR+YDLG K++LRKC+
Sbjct: 929 LEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRIYDLGMKQMLRKCQ 974
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
Length = 1213
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT D++P ++ FQG L+ G+G+ LR+YD+GKKKLLRK E+K + I+ +
Sbjct: 929 GAGLELLHKTETDDIPMSLLAFQGRLVAGIGKALRIYDIGKKKLLRKAESKTFASAIISL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+ YK EN+LL+FADDTQ RW+T S ++DY TVA+ D+FGN+
Sbjct: 989 NTQGSRIIVGDMQESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDRFGNI 1048
Query: 192 CI 193
I
Sbjct: 1049 FI 1050
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT D++P ++ FQG L+ G+G+ LR+YD+GKKKLLRK E+K
Sbjct: 932 LELLHKTETDDIPMSLLAFQGRLVAGIGKALRIYDIGKKKLLRKAESKT 980
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 92/123 (74%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +F+H+T A+ F+G LVG G++LR+YD+G+KKLL KCENK+ P IV I
Sbjct: 935 GDRFDFLHRTETPLPVGAIHDFRGMALVGFGKFLRMYDIGQKKLLAKCENKNFPVNIVNI 994
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G RI VSD QESV +RY++ +NQL++FADDT PR+++ CVLDY+TVA ADKFGN+
Sbjct: 995 QSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAIADKFGNL 1054
Query: 192 CIV 194
+V
Sbjct: 1055 SVV 1057
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+F+H+T A+ F+G LVG G++LR+YD+G+KKLL KCENK
Sbjct: 938 FDFLHRTETPLPVGAIHDFRGMALVGFGKFLRMYDIGQKKLLAKCENK 985
>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
MF3/22]
Length = 1213
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT D+VP A+ FQG L GVG+ LR+Y++GKKKLLRK E K + IV +
Sbjct: 929 GADLELVHKTEADDVPMALMAFQGRLCAGVGKSLRIYEIGKKKLLRKVETKTYGSAIVTL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+QES+ +K EN+LLIFADD+QPRW T++ ++DY T+A+ DKFGNV
Sbjct: 989 NTQGSRIIVGDMQESIVYAVFKPPENRLLIFADDSQPRWTTSAVMVDYTTIAAGDKFGNV 1048
Query: 192 CI 193
I
Sbjct: 1049 FI 1050
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E VHKT D+VP A+ FQG L GVG+ LR+Y++GKKKLLRK E K
Sbjct: 932 LELVHKTEADDVPMALMAFQGRLCAGVGKSLRIYEIGKKKLLRKVETKT 980
>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 1209
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E P A+ FQG L+ G+G+ LR+YDLG K++LRKC+ + PNLIV +
Sbjct: 926 GRELEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRVYDLGMKQMLRKCQVEASPNLIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK ENQL+ F DD RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF+HKT ++E P A+ FQG L+ G+G+ LR+YDLG K++LRKC+
Sbjct: 929 LEFIHKTKIEEPPLALLAFQGRLVAGIGKNLRVYDLGMKQMLRKCQ 974
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D++P + FQG LL GVG+ LRLY++GKK LLRKCEN P +V I
Sbjct: 933 GRVLEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCENNGFPTAVVTI 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
G RI V D+QES F Y+ QLLIFADD+QPRWIT +DY TVA DKFGN
Sbjct: 993 NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1052
Query: 191 VCI 193
+ I
Sbjct: 1053 IFI 1055
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA 57
+EF+HKT D++P + FQG LL GVG+ LRLY++GKK LLRKCEN GF A
Sbjct: 936 LEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCEN----NGFPTA 988
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D++P + FQG LL GVG+ LRLY++GKK LLRKCEN P +V I
Sbjct: 933 GRVLEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCENNGFPTAVVTI 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
G RI V D+QES F Y+ QLLIFADD+QPRWIT +DY TVA DKFGN
Sbjct: 993 NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1052
Query: 191 VCI 193
+ I
Sbjct: 1053 IFI 1055
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA 57
+EF+HKT D++P + FQG LL GVG+ LRLY++GKK LLRKCEN GF A
Sbjct: 936 LEFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCEN----NGFPTA 988
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 85/122 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G A+E VHKT VDE+P A+ FQG L GVG+ LR+YDLGKKKLLRK ENK + I+ +
Sbjct: 930 GKAIELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSAIISL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
G RI V D Q+SV YK EN+L++FADD PRW T + ++DY+TVA D+FGN+
Sbjct: 990 SVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNL 1049
Query: 192 CI 193
+
Sbjct: 1050 WV 1051
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VDE+P A+ FQG L GVG+ LR+YDLGKKKLLRK ENK
Sbjct: 933 IELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENK 980
>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
Length = 1207
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 17/186 (9%)
Query: 8 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS 67
S DE ++C GA G +L L +G LR E GF +T+S
Sbjct: 867 SDDEAALSLCSSVGA----NGEHLVL--VGTSVGLRMGEKHAS-SGF-----VYTYS--- 911
Query: 68 DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
+ G+ + HKT +D +P A+C +QG +LVGVG LR+Y++GKKKLLRKCE++ PNL
Sbjct: 912 --VSGSHLHLEHKTPMDGIPRAICNYQGRVLVGVGSALRMYEIGKKKLLRKCESRKFPNL 969
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
I I + G RI+V D ES L+R+ N +FA+D + RW+T SC LD++TVA ADK
Sbjct: 970 ICSIHTQGDRIFVGDSAESFSLLRFNSLSNSFELFAEDARARWLTASCPLDFDTVAGADK 1029
Query: 188 FGNVCI 193
FGN+ I
Sbjct: 1030 FGNLFI 1035
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 5 HKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
HKT +D +P A+C +QG +LVGVG LR+Y++GKKKLLRKCE++
Sbjct: 921 HKTPMDGIPRAICNYQGRVLVGVGSALRMYEIGKKKLLRKCESR 964
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 3/124 (2%)
Query: 72 GNAMEFVHKTSV--DEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIV 129
G +E +H+T + E+P A+ FQG LL GVG+ LR+YDLGKKKLLRK E K P IV
Sbjct: 920 GTGLELLHETPIQDSELPRALLAFQGRLLAGVGKALRIYDLGKKKLLRKAETKS-PTAIV 978
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+ + G RI + D+QES YK EN+LLIF DDTQPRW++ ++DYNTVA DKFG
Sbjct: 979 SLATQGSRIVIGDMQESTLFAVYKEAENRLLIFGDDTQPRWVSAMTMVDYNTVAVGDKFG 1038
Query: 190 NVCI 193
N+ +
Sbjct: 1039 NIFV 1042
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 1 MEFVHKTSV--DEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E +H+T + E+P A+ FQG LL GVG+ LR+YDLGKKKLLRK E K
Sbjct: 923 LELLHETPIQDSELPRALLAFQGRLLAGVGKALRIYDLGKKKLLRKAETK 972
>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1218
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D++P + FQG LL G+G+ LRLY++GKK LLRKCEN P +V I
Sbjct: 934 GRILEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTAVVTI 993
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
G RI V D+QES F Y+ QLLIFADD+QPRWIT +DY TVA DKFGN
Sbjct: 994 NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1053
Query: 191 VCI 193
+ I
Sbjct: 1054 IFI 1056
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA 57
+EF+HKT D++P + FQG LL G+G+ LRLY++GKK LLRKCEN GF A
Sbjct: 937 LEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCEN----NGFPTA 989
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D++P + FQG LL G+G+ LRLY++GKK LLRKCEN P +V I
Sbjct: 933 GRILEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTAVVTI 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
G RI V D+QES F Y+ QLLIFADD+QPRWIT +DY TVA DKFGN
Sbjct: 993 NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1052
Query: 191 VCI 193
+ I
Sbjct: 1053 IFI 1055
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA 57
+EF+HKT D++P + FQG LL G+G+ LRLY++GKK LLRKCEN GF A
Sbjct: 936 LEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCEN----NGFPTA 988
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 106/177 (59%), Gaps = 21/177 (11%)
Query: 18 PFQGALL-VGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAME 76
P G LL VG + L+ Y ++C+N GF H + D G +E
Sbjct: 827 PEHGTLLAVGTAQGLKFYP-------KECQN-----GF-----VHLYRFLDD---GKRIE 866
Query: 77 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH 136
+HKT+V+ VP AM F+G LLVGV LRLYD+GKK++LRKCE + LP I + G
Sbjct: 867 LLHKTAVEGVPGAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCEYRRLPTRIATLHVSGS 926
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
RIYV D QES F +RYK+ +NQ IFADD PR +T + LDY+T+A AD+FGNV +
Sbjct: 927 RIYVGDGQESTFFMRYKKGDNQFYIFADDIVPRHVTAALHLDYDTLAGADRFGNVFV 983
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+E +HKT+V+ VP AM F+G LLVGV LRLYD+GKK++LRKCE
Sbjct: 865 IELLHKTAVEGVPGAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCE 910
>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
Length = 1211
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + + P LIV +
Sbjct: 928 GRELEFIHKTKVEEPPLALIPFQGRLLAGIGKMLRVYDLGLRQLLRKAQGEVAPQLIVTL 987
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI V DVQ+ V V YK N+LL+FADDT RW T + ++DY +VA DKFGNV
Sbjct: 988 QTQGSRIIVGDVQQGVTYVVYKPESNKLLVFADDTINRWTTCTTMVDYESVAGGDKFGNV 1047
Query: 192 CIV 194
I+
Sbjct: 1048 WIL 1050
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + +V
Sbjct: 931 LEFIHKTKVEEPPLALIPFQGRLLAGIGKMLRVYDLGLRQLLRKAQGEV 979
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LLVG+G+ LR+YDLG ++LLRK + + PNLIV +
Sbjct: 929 GKEIEFIHKTKVEEPPMALLGFQGRLLVGIGKDLRIYDLGMRQLLRKAQAEVAPNLIVGL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ ++ YK EN+L+ F DDT RW + + ++DY TVA DKFGN+
Sbjct: 989 QTQGSRIVVSDVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGGDKFGNL 1048
Query: 192 CIV 194
++
Sbjct: 1049 WLL 1051
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LLVG+G+ LR+YDLG ++LLRK + +V
Sbjct: 932 IEFIHKTKVEEPPMALLGFQGRLLVGIGKDLRIYDLGMRQLLRKAQAEV 980
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D+VP A+ FQG LL GVG+ LRLY++GKK LLRKCEN P + I
Sbjct: 932 GKRLEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENNGFPTGVATI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+G RI V D+QES F Y+ + QLLIFADD+QPR++T C +DY+TV ADKFGN
Sbjct: 992 NVVGARIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGN 1051
Query: 191 VCI 193
+ +
Sbjct: 1052 IFV 1054
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT D+VP A+ FQG LL GVG+ LRLY++GKK LLRKCEN
Sbjct: 935 LEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENN 982
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT D+VP A+ FQG LL GVG+ LRLY++GKK LLRKCEN P + I
Sbjct: 932 GKRLEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENNGFPTGVATI 991
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+G RI V D+QES F Y+ + QLLIFADD+QPR++T C +DY+TV ADKFGN
Sbjct: 992 NVVGARIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGN 1051
Query: 191 VCI 193
+ +
Sbjct: 1052 IFV 1054
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT D+VP A+ FQG LL GVG+ LRLY++GKK LLRKCEN
Sbjct: 935 LEFMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENN 982
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 926 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENALISFADDIIPRWTTCTTMVDYETVAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 929 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 977
>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1147
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK +++ PN+IV +
Sbjct: 929 GKELEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEIAPNMIVGL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ +V YK EN+L+ F DDT RW + + ++DY TVA DKFGN+
Sbjct: 989 QTQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNL 1048
Query: 192 CIV 194
++
Sbjct: 1049 WLL 1051
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK ++++
Sbjct: 932 LEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEI 980
>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
Length = 1235
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 926 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENNLIPFADDIIPRWTTCTTMVDYETVAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 929 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 977
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 926 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 929 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 977
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK +++ PN+IV +
Sbjct: 929 GKELEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEVAPNMIVGL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ +V YK EN+L+ F DDT RW + + ++DY TVA DKFGN+
Sbjct: 989 QTQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNL 1048
Query: 192 CIV 194
++
Sbjct: 1049 WLL 1051
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK +++V
Sbjct: 932 LEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEV 980
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT VDE+P A+ FQG L GVG+ LR+YDLGKKKLLRK ENK + I+ +
Sbjct: 930 GKVIELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSAIISL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
G RI V D Q+SV YK EN+L++FADD PRW T + ++DY+TVA D+FGN+
Sbjct: 990 SVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNL 1049
Query: 192 CI 193
+
Sbjct: 1050 WV 1051
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+E VHKT VDE+P A+ FQG L GVG+ LR+YDLGKKKLLRK ENK
Sbjct: 933 IELVHKTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENK 980
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 905 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 964
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 965 QTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNI 1024
Query: 192 CIV 194
++
Sbjct: 1025 WLL 1027
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 908 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 956
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 89/123 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LLVG+GR LR+YDLG ++LLRK + + +LIV +
Sbjct: 929 GKEIEFIHKTKVEEPPLALLGFQGRLLVGIGRELRIYDLGMRQLLRKAQTEIAASLIVGL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ V YK EN+L+ FADDT RW T + ++DY TVA DKFGN+
Sbjct: 989 QTQGSRIIVSDVQESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGDKFGNL 1048
Query: 192 CIV 194
++
Sbjct: 1049 WLL 1051
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LLVG+GR LR+YDLG ++LLRK + ++
Sbjct: 932 IEFIHKTKVEEPPLALLGFQGRLLVGIGRELRIYDLGMRQLLRKAQTEI 980
>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
Length = 460
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 158 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 217
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 218 QTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNI 277
Query: 192 CIV 194
++
Sbjct: 278 WLL 280
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 161 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 209
>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
Length = 460
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 158 GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 217
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD PRW T + ++DY TVA DKFGN+
Sbjct: 218 QTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNI 277
Query: 192 CIV 194
++
Sbjct: 278 WLL 280
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG ++LLRKC+ ++
Sbjct: 161 LEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQI 209
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 84/122 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT D++P ++ FQG L+ G+G+ LR+YD+GKKKLLRK E+K I +
Sbjct: 930 GRGLELLHKTECDDIPLSLLAFQGKLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAITSL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI D Q+S+F YK EN+LL+FADD+Q RW T+ +LDYNTV + DKFGNV
Sbjct: 990 STQGARIIAGDAQQSIFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDKFGNV 1049
Query: 192 CI 193
+
Sbjct: 1050 FV 1051
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT D++P ++ FQG L+ G+G+ LR+YD+GKKKLLRK E+K+
Sbjct: 933 LELLHKTECDDIPLSLLAFQGKLVAGIGKCLRIYDMGKKKLLRKAESKL 981
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
Length = 1209
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLAFQGRLVAGIGSILRIYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DDT RW+T++ ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLAFQGRLVAGIGSILRIYDLGMKQLLRKCQAPV 977
>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1209
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + P LIV +
Sbjct: 926 GRDLEFIHKTRVEEPPMALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+RI V D+Q+ V V YK N+L+ F DDT RW T + ++DY +VAS DKFGN+
Sbjct: 986 QSQGNRIIVGDLQQGVTYVVYKAEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNI 1045
Query: 192 CIV 194
IV
Sbjct: 1046 SIV 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + V
Sbjct: 929 LEFIHKTRVEEPPMALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV 977
>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
Length = 1209
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+ P A+ FQG LL G+G LR+YDLG K+LLRKC+ + +P +IV +
Sbjct: 926 GKELEFIHKTKVESPPQALLAFQGRLLAGIGTNLRIYDLGMKQLLRKCQAEVVPRMIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN+L+ FADD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+ P A+ FQG LL G+G LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVESPPQALLAFQGRLLAGIGTNLRIYDLGMKQLLRKCQAEV 977
>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
Length = 1240
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G++++ +H+T VDEVP A+C F G L G+GR +R+YDLGKKKLLRKCENK +P+ + K+
Sbjct: 922 GHSLQLLHRTEVDEVPAALCEFDGKLAAGIGRSVRVYDLGKKKLLRKCENKAMPHFVTKL 981
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+MG R+Y D+ ++V V++++ NQL+ FAD PR IT VLDYNTV DK GN+
Sbjct: 982 RAMGERLYAGDLTDNVSFVKFRKGTNQLVEFADGGIPRSITALDVLDYNTVVCGDKGGNL 1041
Query: 192 CI 193
+
Sbjct: 1042 FV 1043
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++ +H+T VDEVP A+C F G L G+GR +R+YDLGKKKLLRKCENK
Sbjct: 925 LQLLHRTEVDEVPAALCEFDGKLAAGIGRSVRVYDLGKKKLLRKCENKA 973
>gi|238594622|ref|XP_002393535.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
gi|215461159|gb|EEB94465.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
Length = 239
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 84/118 (71%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
E + + D VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK + IV + + G
Sbjct: 7 EDLPRPKTDIVPLALLGFQGRLVAGVGKALRIYDIGKKKLLRKVENKQFASAIVALNTQG 66
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
RI V+D+QESV YK EN+LL+FADDTQPRWI+ ++DYNTVA D+FGN+ +
Sbjct: 67 SRILVADMQESVSFAVYKPPENRLLVFADDTQPRWISAMTMVDYNTVACGDRFGNIFV 124
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
E + + D VP A+ FQG L+ GVG+ LR+YD+GKKKLLRK ENK
Sbjct: 7 EDLPRPKTDIVPLALLGFQGRLVAGVGKALRIYDIGKKKLLRKVENK 53
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + + P LIV +
Sbjct: 928 GRDLEFIHKTKVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAPQLIVSL 987
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI V DVQ+ + V YK N+LL FADDT RW T + ++DY +VA DKFGN+
Sbjct: 988 QTQGSRIIVGDVQQGITYVVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNI 1047
Query: 192 CIV 194
I+
Sbjct: 1048 WIL 1050
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + +V
Sbjct: 931 LEFIHKTKVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEV 979
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
Length = 1214
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT +DE+P + FQG LLVG G+ LRLY+ GKK LLRKCEN P +I I
Sbjct: 930 GRTLEFMHKTKLDEIPLCVAGFQGYLLVGAGKSLRLYEAGKKALLRKCENNSFPTVIATI 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+G RI V D+QES F Y+ QLL+F DDTQPR++T +DY+TVA DKFGN
Sbjct: 990 NVIGARIIVGDMQESTFFCVYRSIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGN 1049
Query: 191 VCI 193
V +
Sbjct: 1050 VFV 1052
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+HKT +DE+P + FQG LLVG G+ LRLY+ GKK LLRKCEN
Sbjct: 933 LEFMHKTKLDEIPLCVAGFQGYLLVGAGKSLRLYEAGKKALLRKCENN 980
>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
Length = 1192
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + P LIV +
Sbjct: 909 GRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 968
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+RI V D+Q+ + V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 969 QSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNI 1028
Query: 192 CIV 194
IV
Sbjct: 1029 YIV 1031
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + V
Sbjct: 912 LEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV 960
>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
Length = 1192
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + P LIV +
Sbjct: 909 GRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 968
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+RI V D+Q+ + V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 969 QSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNI 1028
Query: 192 CIV 194
IV
Sbjct: 1029 YIV 1031
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + V
Sbjct: 912 LEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV 960
>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
Length = 1209
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 12 VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV 71
VP+A + L+VG G+ + L + + +G+ ++ H
Sbjct: 886 VPFASQEGESFLVVGTGKDMVL------------DPRQFTEGYIHVYRFHED-------- 925
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + P LIV +
Sbjct: 926 GRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+RI V D+Q+ + V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 986 QSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNI 1045
Query: 192 CIV 194
IV
Sbjct: 1046 YIV 1048
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + V
Sbjct: 929 LEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV 977
>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
Length = 1209
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 12 VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV 71
VP+A + L+VG G+ + L + + +G+ ++ H
Sbjct: 886 VPFASQEGESFLVVGTGKDMVL------------DPRQFTEGYIHVYRFHED-------- 925
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + P LIV +
Sbjct: 926 GRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+RI V D+Q+ + V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 986 QSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNI 1045
Query: 192 CIV 194
IV
Sbjct: 1046 YIV 1048
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK + V
Sbjct: 929 LEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADV 977
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLV-GVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G +E +HKT D++P ++ FQG LLV G+G+ LR+YD+GKKKLLRK E+K I
Sbjct: 907 GRGLELLHKTECDDIPLSLLAFQGNLLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAITS 966
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+ + G RI D Q+S+F YK EN+LL+FADD+Q RW T+ +LDYNTV + DKFGN
Sbjct: 967 LSTQGARIIAGDAQQSIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDKFGN 1026
Query: 191 VCI 193
V +
Sbjct: 1027 VFV 1029
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLV-GVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT D++P ++ FQG LLV G+G+ LR+YD+GKKKLLRK E+K+
Sbjct: 910 LELLHKTECDDIPLSLLAFQGNLLVAGIGKCLRIYDMGKKKLLRKAESKL 959
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 83/122 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + VH T D A+C ++G LL GV LR+YD GKKKLLRK EN++ PN I +
Sbjct: 914 GRTLNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYDYGKKKLLRKVENRNFPNFITTL 973
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RIYV DVQES+ V+YK E + IFADDT+PR+IT + LDY+T+A ADKFGN+
Sbjct: 974 HAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTLAGADKFGNI 1033
Query: 192 CI 193
+
Sbjct: 1034 FV 1035
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+ VH T D A+C ++G LL GV LR+YD GKKKLLRK EN + F T
Sbjct: 917 LNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYDYGKKKLLRKVEN----RNFPNFITT 972
Query: 61 HTHSGRSDRL-VGNAMEFVH 79
+G DR+ VG+ E +H
Sbjct: 973 LHAAG--DRIYVGDVQESIH 990
>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
Length = 1235
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E P A+ PFQG LL G+G+ LR+YDLG K+LLRK + + P LIV +
Sbjct: 952 GRDLEFIHKTKIEEPPMALIPFQGRLLAGIGKTLRIYDLGLKQLLRKAQAEIAPQLIVSL 1011
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G+RI V DVQ+ + YK N+LL +ADDT RW T + ++DY +VA DKFGNV
Sbjct: 1012 QTQGNRIVVGDVQQGITYAVYKPESNKLLAWADDTINRWTTCTAMVDYESVAGGDKFGNV 1071
Query: 192 CIV 194
I+
Sbjct: 1072 WIL 1074
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E P A+ PFQG LL G+G+ LR+YDLG K+LLRK + ++
Sbjct: 955 LEFIHKTKIEEPPMALIPFQGRLLAGIGKTLRIYDLGLKQLLRKAQAEI 1003
>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1209
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT VDE P A+ FQG LL G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTQVDEPPLALLGFQGRLLAGIGPILRVYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK +N L+ FADD+ RW +++ ++DY T A DKFGN+
Sbjct: 986 QTQGSRIIVSDVRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT VDE P A+ FQG LL G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTQVDEPPLALLGFQGRLLAGIGPILRVYDLGMKQLLRKCQAPV 977
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL GVG LR+YDLG ++LLRKC+ + P +IV +
Sbjct: 892 GKELEFIHKTKVEQPPLALLGFQGRLLAGVGPDLRIYDLGMRQLLRKCQAQITPRVIVGL 951
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN L+ FADD RW T + ++DY TVA DKFGN+
Sbjct: 952 QTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIISRWTTCTTMVDYETVAGGDKFGNI 1011
Query: 192 CIV 194
++
Sbjct: 1012 WLL 1014
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL GVG LR+YDLG ++LLRKC+ ++
Sbjct: 895 LEFIHKTKVEQPPLALLGFQGRLLAGVGPDLRIYDLGMRQLLRKCQAQI 943
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + + P LIV +
Sbjct: 933 GRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSL 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ + V YK N+L+ FADDT RW T + ++DY++ A ADKFGN+
Sbjct: 993 NTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNL 1052
Query: 192 CIV 194
I+
Sbjct: 1053 WIL 1055
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + +V
Sbjct: 936 LEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEV 984
>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
Length = 1209
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT VDE P A+ FQG LL G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTQVDEPPLALLGFQGRLLAGIGPVLRVYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSD++ESV V YK +N L+ FADD+ RW +++ ++DY T A DKFGN+
Sbjct: 986 QTQGSRIIVSDIRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT VDE P A+ FQG LL G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTQVDEPPLALLGFQGRLLAGIGPVLRVYDLGMKQLLRKCQAPV 977
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + + P LIV +
Sbjct: 933 GRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSL 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ + V YK N+L+ FADDT RW T + ++DY++ A ADKFGN+
Sbjct: 993 NTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNL 1052
Query: 192 CIV 194
I+
Sbjct: 1053 WIL 1055
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + +V
Sbjct: 936 LEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEV 984
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + + P LIV +
Sbjct: 933 GRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSL 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ + V YK N+L+ FADDT RW T + ++DY++ A ADKFGN+
Sbjct: 993 NTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNL 1052
Query: 192 CIV 194
I+
Sbjct: 1053 WIL 1055
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG L+ G+GR LR+YDLG ++LLRK + +V
Sbjct: 936 LEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEV 984
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L VG+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLAFQGRLAVGLGSLLRIYDLGMKQLLRKCQAHVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L VG+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLAFQGRLAVGLGSLLRIYDLGMKQLLRKCQAHV 977
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT VDE P A+ FQG LL G+G+ L++YDLG K+LLRK + + PN+I +
Sbjct: 919 GKELEFIHKTKVDEPPLALLGFQGRLLAGIGKDLKIYDLGMKQLLRKAQGQVAPNVINGL 978
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK +N+L+ FADD PR+ T + ++DY TVA D+FGN
Sbjct: 979 QTQGSRIIVSDVQESVTYVVYKYQDNRLIPFADDMIPRFTTCTTMVDYETVAGGDRFGNF 1038
Query: 192 CIV 194
IV
Sbjct: 1039 WIV 1041
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT VDE P A+ FQG LL G+G+ L++YDLG K+LLRK + +V
Sbjct: 922 LEFIHKTKVDEPPLALLGFQGRLLAGIGKDLKIYDLGMKQLLRKAQGQV 970
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E +HKT VD++P A+ FQG L G+G+ LR++DLGKKKLLRK ENK I +
Sbjct: 927 GKGLELLHKTEVDDIPTAIIGFQGRLAAGIGKALRIFDLGKKKLLRKVENKTFSAAISSL 986
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G R+ V D Q+S+ YK EN+LL+FADD PRW T + ++DY+T A D+FGNV
Sbjct: 987 STQGPRLLVGDAQDSISYAVYKPAENRLLVFADDISPRWTTCATMVDYDTCAGGDRFGNV 1046
Query: 192 CI 193
+
Sbjct: 1047 WV 1048
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 14/100 (14%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT VD++P A+ FQG L G+G+ LR++DLGKKKLLRK ENK F A +
Sbjct: 930 LELLHKTEVDDIPTAIIGFQGRLAAGIGKALRIFDLGKKKLLRKVENKT----FSAAISS 985
Query: 61 HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMC-PFQGALLV 99
+ G LVG+A D + YA+ P + LLV
Sbjct: 986 LSTQGPR-LLVGDAQ--------DSISYAVYKPAENRLLV 1016
>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
Length = 1209
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASV 977
>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
Length = 1209
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASV 977
>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1209
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASV 977
>gi|240280498|gb|EER44002.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus H143]
Length = 305
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ +P+L+V +
Sbjct: 22 GKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGL 81
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 82 QTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 141
Query: 192 CIV 194
++
Sbjct: 142 WLL 144
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ V
Sbjct: 25 LEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASV 73
>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
Length = 1233
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTMVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQES+ V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G LR+YDLG K++LRKC+ V
Sbjct: 929 LEFIHKTMVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASV 977
>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
Length = 1208
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASV 977
>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E P A CPFQG LL G+G+ LR+YDLG K+LLRK + + P LIV +
Sbjct: 930 GRDLEFIHKTIIEEPPLAFCPFQGRLLAGIGKMLRIYDLGLKQLLRKAQAEVSPQLIVSL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ +RI V DVQ + V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 990 DTRHNRIVVGDVQHGMTYVVYKPDSNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNL 1049
Query: 192 CIV 194
IV
Sbjct: 1050 WIV 1052
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E P A CPFQG LL G+G+ LR+YDLG K+LLRK + +V
Sbjct: 933 LEFIHKTIIEEPPLAFCPFQGRLLAGIGKMLRIYDLGLKQLLRKAQAEV 981
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ GVG+ LR+YDLG+K++LRK + P LIV +
Sbjct: 947 GRELEFIHKTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQADVAPQLIVSL 1006
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V V YK N+L+ F DDT RW+T + ++DY +VA DKFGN+
Sbjct: 1007 STQGSRIVVGDVQQGVTYVVYKPLSNKLIPFVDDTVARWMTCTTMVDYESVAGGDKFGNI 1066
Query: 192 CIV 194
IV
Sbjct: 1067 FIV 1069
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ GVG+ LR+YDLG+K++LRK + V
Sbjct: 950 LEFIHKTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQADV 998
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++F+HKT ++ P A F G LL G+G+ LR+YDLG K+LLRK + PNLI +
Sbjct: 1025 GKTIQFIHKTKLEYAPLAFAAFHGRLLAGIGQDLRIYDLGMKQLLRKTQATVAPNLITGL 1084
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ +RI VSD+QESV V YK+ EN+L+ FADD PRW T + +LDY +VA DKFGN+
Sbjct: 1085 TTQNNRIIVSDIQESVTYVVYKQQENKLIPFADDMVPRWTTCTALLDYESVAGGDKFGNL 1144
Query: 192 CIV 194
+V
Sbjct: 1145 WVV 1147
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++F+HKT ++ P A F G LL G+G+ LR+YDLG K+LLRK + V
Sbjct: 1028 IQFIHKTKLEYAPLAFAAFHGRLLAGIGQDLRIYDLGMKQLLRKTQATV 1076
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC + +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WML 1048
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC +V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQV 977
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL GVG LR+YDLG K+LLRKC+ P IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK +N L+ F DD+ RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 38/54 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
+EF+HKT V+E P A+ FQG LL GVG LR+YDLG K+LLRKC+ V K
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAI 982
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
Length = 1210
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC + +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WML 1048
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC +V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQV 977
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL GVG LR+YDLG K+LLRKC+ P IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK +N L+ F DD+ RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 38/54 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
+EF+HKT V+E P A+ FQG LL GVG LR+YDLG K+LLRKC+ V K
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAI 982
>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1209
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V YK EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPMALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASV 977
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + F+HKT V+E P A+ PFQG +LVG+G+ LR+YDLG ++LLRK + + P LI +
Sbjct: 929 GRGLVFIHKTKVEEPPMAIIPFQGRVLVGIGKILRIYDLGMRQLLRKTQAEVAPQLINSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G+RI V DVQ+ + V YK+ N+L+ F DDT RW T S ++DY TVA DKFGN+
Sbjct: 989 STQGNRIIVGDVQQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGDKFGNI 1048
Query: 192 CIV 194
+V
Sbjct: 1049 FVV 1051
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F+HKT V+E P A+ PFQG +LVG+G+ LR+YDLG ++LLRK + +V
Sbjct: 934 FIHKTKVEEPPMAIIPFQGRVLVGIGKILRIYDLGMRQLLRKTQAEV 980
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ + IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRVYDLGMKQLLRKCQAPVVSKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRVYDLGMKQLLRKCQAPV 977
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC + +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNI 1045
Query: 192 CIV 194
++
Sbjct: 1046 WML 1048
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC +V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQV 977
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC + +P IV +
Sbjct: 751 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGL 810
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T++ ++DY T A DKFGN+
Sbjct: 811 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNI 870
Query: 192 CIV 194
++
Sbjct: 871 WML 873
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC +V
Sbjct: 754 LEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQV 802
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
Length = 1225
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ + + IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK +N L+ F DD+ RW T++ ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQV 977
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
Length = 1225
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ + + IV +
Sbjct: 926 GKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK +N L+ F DD+ RW T++ ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
+V
Sbjct: 1046 WLV 1048
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL G+G LR+YDLG K+LLRKC+ +V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQV 977
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPV 977
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPV 977
>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
Length = 1212
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + F+HKT V+E P AM PFQG +LVG+G+ LR+YDLG ++LLRK + + P I+ +
Sbjct: 929 GRGLVFIHKTKVEEPPMAMIPFQGRVLVGIGKTLRIYDLGMRQLLRKAQAEVAPQQIISL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ + YK+ N+L+ F DDT RW T + ++DY TVA DKFGN+
Sbjct: 989 STQGSRIVVGDVQQGITYAVYKQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDKFGNI 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F+HKT V+E P AM PFQG +LVG+G+ LR+YDLG ++LLRK + +V
Sbjct: 934 FIHKTKVEEPPMAMIPFQGRVLVGIGKTLRIYDLGMRQLLRKAQAEV 980
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ +P IV +
Sbjct: 926 GRELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDV+ESV V YK EN L+ F DD+ RW T + ++DY T A DKFGN+
Sbjct: 986 QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ G+G LR+YDLG K+LLRKC+ V
Sbjct: 929 LEFIHKTKVEEPPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPV 977
>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
Length = 1209
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 87/123 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ +P+L+V +
Sbjct: 926 GKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGL 985
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSDVQESV V +K EN+L+ F DD RW T + ++DY TVA DKFGN+
Sbjct: 986 QTQGSRIIVSDVQESVTYVVFKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNL 1045
Query: 192 CIV 194
++
Sbjct: 1046 WLL 1048
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V++ P A+ FQG LL G+G +R+YDLG +++LRKC+ V
Sbjct: 929 LEFIHKTKVEQPPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASV 977
>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
Length = 1212
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + F+HKT V+E P AM PFQG +LVG+G+ LR+YDLG ++LLRK + + P IV +
Sbjct: 929 GRGLVFIHKTKVEEPPMAMIPFQGRVLVGIGKMLRIYDLGMRQLLRKSQAEVAPQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ + V +K+ N+L+ F DDT RW T S ++DY T A DKFGN+
Sbjct: 989 NAQGSRIVVGDVQQGITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDKFGNI 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F+HKT V+E P AM PFQG +LVG+G+ LR+YDLG ++LLRK + +V
Sbjct: 934 FIHKTKVEEPPMAMIPFQGRVLVGIGKMLRIYDLGMRQLLRKSQAEV 980
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E A+ PFQG LL G+G+ LR+YDLG ++LLRK + + +P IV +
Sbjct: 923 GRELEFIHKTKIEEPATALLPFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSL 982
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI VSDVQ+ V LV YK N+L+ F DD+ RW T + ++DY +VA DKFGN+
Sbjct: 983 NTQGSRIVVSDVQQGVTLVVYKSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDKFGNM 1042
Query: 192 CIV 194
IV
Sbjct: 1043 FIV 1045
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E A+ PFQG LL G+G+ LR+YDLG ++LLRK + +V
Sbjct: 926 LEFIHKTKIEEPATALLPFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEV 974
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 85/126 (67%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI 128
RL+ + + +H+T VD+VP + F+G LLV VG LR+YDLGK+KLLRK E P LI
Sbjct: 930 RLLESRLVLLHRTEVDDVPLGLAEFRGRLLVAVGATLRMYDLGKRKLLRKTEAALAPTLI 989
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
K+E +G RI+V+D SV L RY R N+L +FADD R +T LDY+TVA ADKF
Sbjct: 990 TKVEVVGDRIFVADAAMSVHLARYVRDRNRLAVFADDPVGRCVTAFAPLDYDTVAVADKF 1049
Query: 189 GNVCIV 194
GNV ++
Sbjct: 1050 GNVAVL 1055
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+H+T VD+VP + F+G LLV VG LR+YDLGK+KLLRK E
Sbjct: 938 LLHRTEVDDVPLGLAEFRGRLLVAVGATLRMYDLGKRKLLRKTE 981
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E A+ FQG LL G+G+ LR+YDLG ++LLRK + + +P IV +
Sbjct: 929 GRELEFIHKTKIEEPAMALLAFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V LV YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 989 NTQGSRIVVGDVQQGVTLVVYKPASNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E A+ FQG LL G+G+ LR+YDLG ++LLRK + +V
Sbjct: 932 LEFIHKTKIEEPAMALLAFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEV 980
>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
Length = 1211
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + + LIV +
Sbjct: 928 GRSLEFIHKTRVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAQQLIVSL 987
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G+RI V DVQ+ V V YK N+L+ F DDT RW T ++DY +VA D+FGN+
Sbjct: 988 QTQGNRIVVGDVQQGVTYVVYKPESNKLIPFVDDTINRWTTCITMVDYESVAGGDRFGNL 1047
Query: 192 CIV 194
IV
Sbjct: 1048 WIV 1050
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ PFQG LL G+G+ LR+YDLG ++LLRK + +V
Sbjct: 931 LEFIHKTRVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEV 979
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E A+ PFQG LL GVG+ LR+YDLG +++LRK + + P IV +
Sbjct: 929 GRELEFIHKTKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V V YK N+L+ FADD RWIT + ++DY +VA DKFGN+
Sbjct: 989 NTQGSRIIVGDVQQGVTYVTYKPTTNKLIPFADDIIARWITCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E A+ PFQG LL GVG+ LR+YDLG +++LRK + +V
Sbjct: 932 LEFIHKTKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEV 980
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E A+ PFQG LL GVG+ LR+YDLG +++LRK + + P IV +
Sbjct: 929 GRELEFIHKTKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V D+Q+ V V YK N+L+ FADDT RW T + ++DY +VA DKFGN+
Sbjct: 989 NTQGSRIIVGDIQQGVTYVTYKPTTNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT ++E A+ PFQG LL GVG+ LR+YDLG +++LRK + +V
Sbjct: 932 LEFIHKTKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEV 980
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 84/123 (68%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ GVGR LR+YDLG ++LLRK +++ P +IV +
Sbjct: 933 GRELEFIHKTKVEEPPMALLAFQGKLVAGVGRSLRIYDLGLRQLLRKAQSEVAPRVIVSL 992
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI V D Q + V YK+ N+L+ FADD+ RW T S ++DY + A DKFGN+
Sbjct: 993 QTQGSRIVVGDSQHGLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGDKFGNI 1052
Query: 192 CIV 194
I+
Sbjct: 1053 WIL 1055
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ GVGR LR+YDLG ++LLRK +++V
Sbjct: 936 LEFIHKTKVEEPPMALLAFQGKLVAGVGRSLRIYDLGLRQLLRKAQSEV 984
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL GVG LR+YDLG K++LRKC+ PNLIV +
Sbjct: 926 GKELEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQVT-TPNLIVGL 984
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSD+QESV YK EN+L+ F DD RW T ++DY TVA DKFGN+
Sbjct: 985 QTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFGNL 1044
Query: 192 CIV 194
++
Sbjct: 1045 WML 1047
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF+HKT V++ P A+ FQG LL GVG LR+YDLG K++LRKC+
Sbjct: 929 LEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQ 974
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V++ P A+ FQG LL GVG LR+YDLG K++LRKC+ PNLIV +
Sbjct: 630 GKELEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQVT-TPNLIVGL 688
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI VSD+QESV YK EN+L+ F DD RW T ++DY TVA DKFGN+
Sbjct: 689 QTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFGNL 748
Query: 192 CIV 194
++
Sbjct: 749 WML 751
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF+HKT V++ P A+ FQG LL GVG LR+YDLG K++LRKC+
Sbjct: 633 LEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQ 678
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG +++LRK + P LIV +
Sbjct: 929 GHELEFIHKTKVEEPPTALLAFQGRLLAGVGKTLRIYDLGLRQMLRKSQADVAPQLIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ V V YK N+L+ F DDT RW+T + ++DY +VA DKFGN+
Sbjct: 989 STQGSRIVVGDVQHGVTYVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
+V
Sbjct: 1049 FLV 1051
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG +++LRK + V
Sbjct: 932 LEFIHKTKVEEPPTALLAFQGRLLAGVGKTLRIYDLGLRQMLRKSQADV 980
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 81/123 (65%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E + T +D +P A+ PFQG +L GVGR+LR+YDLG KK+LRK E +P I I
Sbjct: 924 GKKLELISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGNKKMLRKGELSAVPLFITHI 983
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
RI V+D Q SV V YK +N LL FADDT RW TT+ ++DY+T+A DKFGN+
Sbjct: 984 TVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDKFGNI 1043
Query: 192 CIV 194
++
Sbjct: 1044 WLL 1046
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+E + T +D +P A+ PFQG +L GVGR+LR+YDLG KK+LRK E
Sbjct: 927 LELISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGNKKMLRKGE 972
>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
Length = 632
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 30 YLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYA 89
Y L D+G K L+ + GF H + D G ++E +HKT V+ VP A
Sbjct: 340 YGTLLDVGTAKGLQFTPRRSLTAGF-----IHIYRFLED---GRSLELLHKTQVEGVPLA 391
Query: 90 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL 149
+ FQG LL G+G LR YDLGK++LLRK ENK PN IV I++ RIYV D QES
Sbjct: 392 LSQFQGRLLAGIGPVLRFYDLGKRRLLRKYENKLFPNTIVSIQTYRDRIYVGDTQESFHY 451
Query: 150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+Y+ ENQL IFADD PRW+T S +D++T+A G +
Sbjct: 452 CKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAEDPTGGRI 493
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+ FQG LL G+G LR YDLGK++LLRK ENK+
Sbjct: 377 LELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFYDLGKRRLLRKYENKL 425
>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
Length = 1207
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + VHKT VD VP A+ F G LL G G Y+R++D+G KKLLRKC+++ P+ +V +
Sbjct: 922 GCGLALVHKTEVDHVPLALRAFHGRLLAGTGPYVRIFDMGTKKLLRKCQSRPFPSKVVSL 981
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCV-LDYNTVASADKFGN 190
+ G+R+ V D+QESV YK N L+ FADD PRW T++ + LDY+TV + DKFGN
Sbjct: 982 QVQGYRVIVGDMQESVHYSVYKPATNTLVAFADDIMPRWTTSALLMLDYDTVMAGDKFGN 1041
Query: 191 VCIV 194
V ++
Sbjct: 1042 VFVL 1045
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 21/87 (24%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--------VRIK 52
+ VHKT VD VP A+ F G LL G G Y+R++D+G KKLLRKC+++ ++++
Sbjct: 925 LALVHKTEVDHVPLALRAFHGRLLAGTGPYVRIFDMGTKKLLRKCQSRPFPSKVVSLQVQ 984
Query: 53 GFRKAHQTHTHSGRSDRLVGNAMEFVH 79
G+R +VG+ E VH
Sbjct: 985 GYRV-------------IVGDMQESVH 998
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V+E P A+ FQG LL G+G+ LR+YDLG +++LRK + P LIV +
Sbjct: 929 GHELEFIHKTKVEEPPSALLGFQGRLLAGIGKTLRIYDLGLRQMLRKAQADVTPQLIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ + V YK N+L+ F DDT RW+T + ++DY +VA DKFGN+
Sbjct: 989 STQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTVSRWVTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
+V
Sbjct: 1049 FLV 1051
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL G+G+ LR+YDLG +++LRK + V
Sbjct: 932 LEFIHKTKVEEPPSALLGFQGRLLAGIGKTLRIYDLGLRQMLRKAQADV 980
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI 128
R G +E +HKT +P A+ F+G LL GVG LR+Y+ GKKKLLRKCE++ LP I
Sbjct: 920 RDSGRQLELIHKTPTGGIPGALAAFKGRLLAGVGPTLRIYEAGKKKLLRKCEHRKLPTHI 979
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
+ + G RI+V D+QES+ RYK EN L +ADD PR +T + LDY+TVA ADKF
Sbjct: 980 ATLATSGDRIFVGDLQESMHYFRYKANENALYEYADDIAPRHLTAALPLDYDTVAGADKF 1039
Query: 189 GNVCIVSTYRE 199
N+ + R+
Sbjct: 1040 CNIFVTRLPRD 1050
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT +P A+ F+G LL GVG LR+Y+ GKKKLLRKCE++ +
Sbjct: 926 LELIHKTPTGGIPGALAAFKGRLLAGVGPTLRIYEAGKKKLLRKCEHR------KLPTHI 979
Query: 61 HTHSGRSDRL-VGNAMEFVH 79
T + DR+ VG+ E +H
Sbjct: 980 ATLATSGDRIFVGDLQESMH 999
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%)
Query: 79 HKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI 138
++ +V+E P A+ FQG LL GVG+ LR+YDLG K+LLRK + + +PNLIV + + G RI
Sbjct: 691 NEAAVEEPPMALLGFQGRLLAGVGKDLRIYDLGMKQLLRKSQAEVVPNLIVGLRTQGSRI 750
Query: 139 YVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
VSDVQESV +V YK EN+L+ F DDT RW + S ++DY TVA DKFGN+ ++
Sbjct: 751 IVSDVQESVVMVVYKFQENRLIPFVDDTIARWTSCSTMVDYETVAGGDKFGNLWLL 806
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 5 HKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++ +V+E P A+ FQG LL GVG+ LR+YDLG K+LLRK + +V
Sbjct: 691 NEAAVEEPPMALLGFQGRLLAGVGKDLRIYDLGMKQLLRKSQAEV 735
>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 702
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 30 YLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYA 89
Y L D+G K L+ + GF H + D G ++E +HKT V+ VP A
Sbjct: 407 YGTLLDVGTAKGLQFTPRRSLTAGF-----IHIYRFLED---GRSLELLHKTQVEGVPLA 458
Query: 90 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL 149
+ FQG LL G+G LR YDLGK++LLRK ENK PN IV I++ RIYV D QES
Sbjct: 459 LSQFQGRLLAGIGPVLRFYDLGKRRLLRKYENKLFPNTIVSIQTYRDRIYVGDTQESFHY 518
Query: 150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+Y+ ENQL IFADD PRW+T S +D++T+A ++
Sbjct: 519 CKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAGIEE 556
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E +HKT V+ VP A+ FQG LL G+G LR YDLGK++LLRK ENK+
Sbjct: 444 LELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFYDLGKRRLLRKYENKL 492
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 82/123 (66%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +EF+HKT V+E P A+ FQG LL G+G+ LR+YDLG +++LRK + P LIV +
Sbjct: 929 GHELEFIHKTKVEEPPSALLGFQGRLLAGIGQTLRIYDLGLRQMLRKAQADVAPQLIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ + V YK N+L+ F DDT RW+T + ++DY +V DKFGN+
Sbjct: 989 STQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTISRWVTCTTMVDYESVVGGDKFGNI 1048
Query: 192 CIV 194
+V
Sbjct: 1049 FLV 1051
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL G+G+ LR+YDLG +++LRK + V
Sbjct: 932 LEFIHKTKVEEPPSALLGFQGRLLAGIGQTLRIYDLGLRQMLRKAQADV 980
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHL-PNLIVK 130
G +EF+HKT ++ P A+ PFQG LLVGV LRLYDLG ++LLRK + ++ PN+++
Sbjct: 926 GRELEFIHKTKMEAPPMALLPFQGKLLVGVEADLRLYDLGLRQLLRKAQALNVVPNILIG 985
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+++ G RI SDVQESV V YK EN+L+ F DD+ RW + + ++DY T A DKFGN
Sbjct: 986 LQTQGSRIVCSDVQESVTYVVYKHLENRLIQFCDDSIHRWTSCTAMVDYETTAGGDKFGN 1045
Query: 191 VCIV 194
+ +V
Sbjct: 1046 IWLV 1049
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF+HKT ++ P A+ PFQG LLVGV LRLYDLG ++LLRK +
Sbjct: 929 LEFIHKTKMEAPPMALLPFQGKLLVGVEADLRLYDLGLRQLLRKAQ 974
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 79/123 (64%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++EF+HKT V+E P A+ F G LL G+G+ LR+YDLG ++LLRK + P IV +
Sbjct: 756 GRSLEFIHKTKVEEPPTALLSFHGRLLAGIGKTLRIYDLGMRQLLRKAQADISPQHIVSL 815
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G RI V DVQ V +V Y N+LL F DDT RW T + DY +VA DKFGN+
Sbjct: 816 QSQGFRIVVGDVQHGVTMVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDKFGNI 875
Query: 192 CIV 194
IV
Sbjct: 876 WIV 878
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ F G LL G+G+ LR+YDLG ++LLRK + +
Sbjct: 759 LEFIHKTKVEEPPTALLSFHGRLLAGIGKTLRIYDLGMRQLLRKAQADI 807
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 80/114 (70%)
Query: 80 KTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIY 139
+T VD+VP A+ +G L GVG+ LR+Y++GKKKLLRK ENK IV + S G RI
Sbjct: 936 QTEVDDVPLALLGIKGRLCAGVGKALRIYEMGKKKLLRKSENKGFATAIVTLTSQGSRII 995
Query: 140 VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V ++QESV YK N+LL+FADDT RW+T++ ++DY+TVA DKFGN+ +
Sbjct: 996 VGEMQESVHYATYKPESNRLLVFADDTSARWVTSAALVDYDTVAVGDKFGNIFV 1049
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 6 KTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSG 65
+T VD+VP A+ +G L GVG+ LR+Y++GKKKLLRK EN KGF A T T G
Sbjct: 936 QTEVDDVPLALLGIKGRLCAGVGKALRIYEMGKKKLLRKSEN----KGFATAIVTLTSQG 991
Query: 66 RSDRLVGNAMEFVH 79
S +VG E VH
Sbjct: 992 -SRIIVGEMQESVH 1004
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 82/123 (66%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT ++E P A+ PFQG + V VG LR+YDLG +++LRK + + IV +
Sbjct: 929 GRELEFIHKTKIEEPPLALLPFQGKVAVAVGTQLRIYDLGMRQMLRKAQAEVSAQRIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V LV YK N+L+ FADDT RW T + ++DY ++A DKFGN+
Sbjct: 989 NTQGSRIVVGDVQQGVTLVVYKSATNKLIPFADDTVARWTTCTTMVDYESIAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIK 52
+EF+HKT ++E P A+ PFQG + V VG LR+YDLG +++LRK + +V +
Sbjct: 932 LEFIHKTKIEEPPLALLPFQGKVAVAVGTQLRIYDLGMRQMLRKAQAEVSAQ 983
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 80/123 (65%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EFVH+T D YA+C F G L +GVG L +YD+G K LLRK +PNLI I
Sbjct: 935 GTKLEFVHRTQFDSPIYALCKFNGRLALGVGNELFIYDMGMKHLLRKARGTAVPNLITHI 994
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
S+G+R+ +DV ESV V YK N+L+ F DDT RW T + ++DY TVA ADKFGN+
Sbjct: 995 TSVGNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGADKFGNL 1054
Query: 192 CIV 194
+V
Sbjct: 1055 WVV 1057
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
+EFVH+T D YA+C F G L +GVG L +YD+G K LLRK
Sbjct: 938 LEFVHRTQFDSPIYALCKFNGRLALGVGNELFIYDMGMKHLLRKA 982
>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
Length = 1233
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 82/120 (68%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++ VH T V++ P A+ PF+G LL GVG LRLY LGKK+LL+KCE K+LP + I
Sbjct: 953 SLNLVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYALGKKRLLKKCEYKNLPCGVAFIRV 1012
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G R++V D++ESV ++RY+ EN + ADD PRW+T VLDY+T +ADKF +V I
Sbjct: 1013 AGDRLFVGDLRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSVFI 1072
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ VH T V++ P A+ PF+G LL GVG LRLY LGKK+LL+KCE K
Sbjct: 954 LNLVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYALGKKRLLKKCEYK 1001
>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
Length = 1233
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 81/120 (67%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++ VH T V++ P A+ F+G LL GVG LRLY LG+K+LL+KCE K+LP + I
Sbjct: 953 SLSLVHSTPVEDYPMALTAFRGMLLAGVGHKLRLYALGRKRLLKKCEYKNLPCGVAFIRV 1012
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G R++V DV+ESV ++RY+ EN + ADD PRW+T VLDY+T +ADKF +V I
Sbjct: 1013 AGDRLFVGDVRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSVFI 1072
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 23/88 (26%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--------VRIK 52
+ VH T V++ P A+ F+G LL GVG LRLY LG+K+LL+KCE K +R+
Sbjct: 954 LSLVHSTPVEDYPMALTAFRGMLLAGVGHKLRLYALGRKRLLKKCEYKNLPCGVAFIRVA 1013
Query: 53 GFRKAHQTHTHSGRSDRL-VGNAMEFVH 79
G DRL VG+ E VH
Sbjct: 1014 G--------------DRLFVGDVRESVH 1027
>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 59/126 (46%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE-NKHLPNLIVK 130
G +E +HKT E P A+ F+G L+ G+G+ L +YDLG K++LRK + N +P LIV
Sbjct: 613 GRDLELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLGLKQMLRKTQANDVVPGLIVS 672
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+++ G+RI V DVQ V +V Y+ NQL+ F DDT RW T + ++DY++VA DKFGN
Sbjct: 673 LQTQGNRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIARWTTCTTMVDYDSVAGGDKFGN 732
Query: 191 VCIVST 196
IV T
Sbjct: 733 FWIVRT 738
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT E P A+ F+G L+ G+G+ L +YDLG K++LRK + + G + QT
Sbjct: 616 LELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLGLKQMLRKTQANDVVPGLIVSLQT 675
Query: 61 H 61
Sbjct: 676 Q 676
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG +LV VG LR+YDLG +++LRK + + IV +
Sbjct: 929 GRELEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V V YK N+L+ F DDT RW T + ++DY +VA DKFGN+
Sbjct: 989 NTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG +LV VG LR+YDLG +++LRK + +V
Sbjct: 932 LEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEV 980
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG +LV VG LR+YDLG +++LRK + + IV +
Sbjct: 929 GRELEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V V YK N+L+ F DDT RW T + ++DY +VA DKFGN+
Sbjct: 989 NTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNM 1048
Query: 192 CIV 194
IV
Sbjct: 1049 FIV 1051
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIK 52
+EF+HKT V+E P A+ FQG +LV VG LR+YDLG +++LRK + +V +
Sbjct: 932 LEFIHKTKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQ 983
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 85/122 (69%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +++ +H T +++P A ++G L+ GVG LR+Y+LG+KKLLRK ENK+ I++I
Sbjct: 918 GQSLQLMHSTPCEDIPMAFNEYKGRLIAGVGPILRIYELGQKKLLRKVENKNFQAPIIQI 977
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ RIY D+QESV +++YK + QL IF+DD RW+T+ C+LD++T+A DKF NV
Sbjct: 978 QVDEGRIYAGDLQESVHVLKYKPEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENV 1037
Query: 192 CI 193
I
Sbjct: 1038 FI 1039
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +H T +++P A ++G L+ GVG LR+Y+LG+KKLLRK ENK
Sbjct: 921 LQLMHSTPCEDIPMAFNEYKGRLIAGVGPILRIYELGQKKLLRKVENK 968
>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1303
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 72 GNAMEFVHKTSVDEVP-YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G+ + +H+TSVD+ P ++ FQG LLVG+G LRLY++GK++LLRK E ++ P +
Sbjct: 1022 GDRFQLLHRTSVDDGPVLSLAHFQGRLLVGIGTTLRLYEMGKRQLLRKSELRNFPTFVKT 1081
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
++++G R Y+ D+ +S+ +VRY N+L++ A+D PR I +LD+NTVA DKFGN
Sbjct: 1082 VQTVGERAYIGDMMQSIQIVRYDVSANRLVLIANDASPRPIVCQELLDWNTVAVGDKFGN 1141
Query: 191 VCIVSTYR 198
+ ++ R
Sbjct: 1142 ISVMRLPR 1149
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 2 EFVHKTSVDEVP-YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+ +H+TSVD+ P ++ FQG LLVG+G LRLY++GK++LLRK E
Sbjct: 1026 QLLHRTSVDDGPVLSLAHFQGRLLVGIGTTLRLYEMGKRQLLRKSE 1071
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 75/123 (60%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G + FVHKT D+ YA+ PF G L +GVG L +YD+G+K LLRK + PN IV +
Sbjct: 940 GTKLTFVHKTKFDQPVYALLPFHGRLALGVGNELFIYDIGQKALLRKARGQATPNQIVSL 999
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
ES G RI DV E V + YK N+L+ F DD RW T + ++DY T A DKFGN+
Sbjct: 1000 ESHGQRIICGDVSEGVTYMVYKPGYNRLIPFVDDVVQRWTTGTTMIDYETTAGGDKFGNL 1059
Query: 192 CIV 194
+V
Sbjct: 1060 WVV 1062
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+ FVHKT D+ YA+ PF G L +GVG L +YD+G+K LLRK +
Sbjct: 943 LTFVHKTKFDQPVYALLPFHGRLALGVGNELFIYDIGQKALLRKARGQA 991
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 80/123 (65%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +++ + +T D + PF G L+ GVG +LR+YDLG KKLLRK E + +PN I I
Sbjct: 884 GLSLKCISETETDSFARVLKPFHGRLIAGVGPFLRVYDLGNKKLLRKSEVRAVPNFITTI 943
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G+RI V+D Q S F V +K +N+ ++FADD RW T + ++DY+TV DKF N+
Sbjct: 944 QTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADDCVARWATATAMVDYDTVVGGDKFSNL 1003
Query: 192 CIV 194
++
Sbjct: 1004 WLL 1006
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE--------NKVRIKGFR 55
+ +T D + PF G L+ GVG +LR+YDLG KKLLRK E ++ +G+R
Sbjct: 890 ISETETDSFARVLKPFHGRLIAGVGPFLRVYDLGNKKLLRKSEVRAVPNFITTIQTQGYR 949
Query: 56 KAHQTHTHSG 65
HS
Sbjct: 950 IIVTDAQHSA 959
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
Query: 72 GNAMEFVHKTSVDE-VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G ++ +HKT VD VP A+ F+G LL GVG LRLYD+GKKK+LRKCE N+ +
Sbjct: 797 GRRLDLLHKTQVDGGVPGALAGFKGRLLAGVGPTLRLYDMGKKKMLRKCEYNRWTNIFLH 856
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+ +R Y QESV ++RYK+ +N IFADD PR+++ LDY+T+A+ DKFGN
Sbjct: 857 V--FFYRPYFRSSQESVHMMRYKKADNAFYIFADDVAPRYLSALLPLDYDTIATGDKFGN 914
Query: 191 VCIVSTYRE 199
+ I+ +E
Sbjct: 915 LVILRLPQE 923
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 1 MEFVHKTSVDE-VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
++ +HKT VD VP A+ F+G LL GVG LRLYD+GKKK+LRKCE
Sbjct: 800 LDLLHKTQVDGGVPGALAGFKGRLLAGVGPTLRLYDMGKKKMLRKCE 846
>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
CIRAD86]
Length = 1223
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 79/123 (64%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EFVHKT + YA+ PF+G L +GVG L +YD+G K LLRK N +PN IV +
Sbjct: 940 GAELEFVHKTKFELPVYALMPFRGRLALGVGNELFIYDMGMKALLRKARNIAVPNQIVSL 999
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
ES G+RI DV E V + YK N+L+ F DDT RW TT+ ++DY T A DKFGN+
Sbjct: 1000 ESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYETAAGGDKFGNL 1059
Query: 192 CIV 194
IV
Sbjct: 1060 WIV 1062
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN 47
+EFVHKT + YA+ PF+G L +GVG L +YD+G K LLRK N
Sbjct: 943 LEFVHKTKFELPVYALMPFRGRLALGVGNELFIYDMGMKALLRKARN 989
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 72 GNAMEFVHKTSVDEVP-YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G ++ +H+T+VD+ P ++ FQG LLVGVG+ +RLY++GK++LL+KCE + +P ++
Sbjct: 931 GERLQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEMGKRQLLKKCELRGMPTMVKT 990
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+++ G R +V D+ +S+ +RY N+L++ A D PR IT +LD NTVA DKFGN
Sbjct: 991 LQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLDINTVAVGDKFGN 1050
Query: 191 VCIVSTYR 198
V I+ R
Sbjct: 1051 VTILRLPR 1058
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
Query: 1 MEFVHKTSVDEVP-YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQ 59
++ +H+T+VD+ P ++ FQG LLVGVG+ +RLY++GK++LL+KCE ++G +
Sbjct: 934 LQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEMGKRQLLKKCE----LRGMPTMVK 989
Query: 60 THTHSGRSDR-LVGNAME 76
T +G DR VG+ M+
Sbjct: 990 TLQAAG--DRAFVGDMMQ 1005
>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
Length = 1059
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG L+ GVG+ LR+YDLG+K++LRK + P LIV +
Sbjct: 929 GRELEFIHKTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQADVAPQLIVSL 988
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ G RI V DVQ+ V V YK N+L+ F DDT RW+T + ++DY + + DKF ++
Sbjct: 989 STQGSRIVVGDVQQGVTYVVYKALSNKLIPFVDDTVARWMTCTTMVDYES-SLRDKFAHL 1047
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG L+ GVG+ LR+YDLG+K++LRK + V
Sbjct: 932 LEFIHKTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQADV 980
>gi|349805695|gb|AEQ18320.1| putative sf3b3 protein [Hymenochirus curtipes]
Length = 248
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 120 ENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY 179
ENKH+ N IV I+++G R+ VSDVQES VRYKR NQL+IFADDT PRW+TTSC+LDY
Sbjct: 110 ENKHIANFIVGIQTIGQRVIVSDVQESFIWVRYKR-NNQLIIFADDTYPRWVTTSCLLDY 168
Query: 180 NTVASADKFGNVCIV 194
TVA ADKFGN+CIV
Sbjct: 169 ETVAGADKFGNICIV 183
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 84 DEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN-KHLPNLIVKIESMGHRIYVSD 142
+E+ M FQG LLV VG LR+YDLGKK+LL+K ++ + P+ I IE+ RI++SD
Sbjct: 999 NEIITTMASFQGHLLVAVGTSLRMYDLGKKQLLKKTQHPRATPHKITCIETCYDRIFLSD 1058
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
VQESVFL RY +N L ADD P+W TT C+LDY+TVA DK GN+ I+
Sbjct: 1059 VQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISIL 1110
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 10 DEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN 47
+E+ M FQG LLV VG LR+YDLGKK+LL+K ++
Sbjct: 999 NEIITTMASFQGHLLVAVGTSLRMYDLGKKQLLKKTQH 1036
>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
Length = 1408
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ++F+HKT V+E P A+ F+ L VG+G+ L +YDLG K+LLRK + P LIV +
Sbjct: 1262 GRELQFIHKTKVEEPPMALVAFRDRLAVGLGKDLCIYDLGLKQLLRKAHIEAAPQLIVSL 1321
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G RI V DVQ+ + +V + E +L+ F DD RW T + ++DY +V DKFGN+
Sbjct: 1322 DTQGDRIVVGDVQQGMTMVMFNHEEQRLIPFVDDIIARWTTCTTMVDYESVVGGDKFGNI 1381
Query: 192 CIV 194
IV
Sbjct: 1382 WIV 1384
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
++F+HKT V+E P A+ F+ L VG+G+ L +YDLG K+LLRK
Sbjct: 1265 LQFIHKTKVEEPPMALVAFRDRLAVGLGKDLCIYDLGLKQLLRKA 1309
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 60 THTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 119
T S ++ +EFVHKT +D P A+ PF G LLVG+ +LRLYDLG+++LLRK
Sbjct: 948 TINKSSNKNKSQNEILEFVHKTELDYQPTAIIPFNGRLLVGMSNFLRLYDLGQRQLLRKA 1007
Query: 120 EN--KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL 177
+ ++L N+I G RI V D S V+Y ENQ + FADD R IT L
Sbjct: 1008 SSNIEYLKNIIRLTHQGGSRIVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTL 1067
Query: 178 DYNTVASADKFGNVCI 193
DY+T+ DKFGN+ +
Sbjct: 1068 DYDTIIGGDKFGNIFV 1083
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EFVHKT +D P A+ PF G LLVG+ +LRLYDLG+++LLRK + + + K
Sbjct: 963 LEFVHKTELDYQPTAIIPFNGRLLVGMSNFLRLYDLGQRQLLRKASSNIE---YLKNIIR 1019
Query: 61 HTHSGRSDRLVGN---AMEFVHKTSVDE--VPYA 89
TH G S +VG+ + FV S + +P+A
Sbjct: 1020 LTHQGGSRIVVGDSSMSTTFVKYDSTENQFIPFA 1053
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
Query: 64 SGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE-NK 122
SG + + G +E VH+T + P+A+ F+G LLVGV LRLYD GKKKLLRK E +
Sbjct: 976 SGANKAITG--LELVHETPCEGAPFALRNFEGKLLVGVDDVLRLYDFGKKKLLRKAECAQ 1033
Query: 123 HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQ---LLIFADDTQPRWITTSCVLDY 179
P+ I I G R +V+D ES F V+Y R ++Q + IFADD PR++T+ LD
Sbjct: 1034 KFPSFINDIRCSGDRFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLDR 1093
Query: 180 NTVASADKFGN 190
+TVA +DKFGN
Sbjct: 1094 DTVAVSDKFGN 1104
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
+E VH+T + P+A+ F+G LLVGV LRLYD GKKKLLRK E + F
Sbjct: 985 LELVHETPCEGAPFALRNFEGKLLVGVDDVLRLYDFGKKKLLRKAECAQKFPSF 1038
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Query: 72 GNAMEFVHKTSVDE-VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
G+ + +H+T+VD +P A+ F G +L GVG LR++DLGKKKLL K EN+ LP+ +V
Sbjct: 888 GDQVVLLHRTAVDGGLPCALAEFAGKVLAGVGNTLRIFDLGKKKLLLKTENRQLPSQVVH 947
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
I +MG RI +D + S ++YK EN L IFADDT PRW T +LDY TVA ADKFGN
Sbjct: 948 ITTMGTRICAADQKHSFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGADKFGN 1007
Query: 191 VCIV 194
+
Sbjct: 1008 FVVA 1011
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
10762]
Length = 1224
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 17/183 (9%)
Query: 12 VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV 71
VP+ ++ L VG G++LR V KG H + D
Sbjct: 898 VPFESKNWEVYLAVGTGQHLR--------------PGVSAKGQAPRGYVHIYKLLED--- 940
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G ME VHKT D YA+ FQG L +GVG L LYD+G K LLRK + N I I
Sbjct: 941 GRNMELVHKTPFDAPIYAVHAFQGRLALGVGADLFLYDVGLKSLLRKSRGTVVANTITSI 1000
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G+R+ +DV ES+ V +K N+++ F DD RW TT+ ++DY T A DKFGN+
Sbjct: 1001 DSRGNRLICADVSESITYVVFKPKHNRMIGFVDDVIQRWTTTAAMIDYETSAGGDKFGNL 1060
Query: 192 CIV 194
+V
Sbjct: 1061 WVV 1063
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
ME VHKT D YA+ FQG L +GVG L LYD+G K LLRK +G A+
Sbjct: 944 MELVHKTPFDAPIYAVHAFQGRLALGVGADLFLYDVGLKSLLRKS------RGTVVANTI 997
Query: 61 HTHSGRSDRLV 71
+ R +RL+
Sbjct: 998 TSIDSRGNRLI 1008
>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
Length = 1123
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIES 133
+ +H T + ++ YA+ FQG +L+G+ +LRL+D+G K+LL K +K + IVKIE+
Sbjct: 845 LNLIHITKISDIAYAITEFQGKVLIGISNHLRLFDMGLKQLLSKANSKIDTISKIVKIET 904
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G+R+ V D++ES+ + YK N+ L F DD PR IT+ +LDYNTV DKFGN+ I
Sbjct: 905 QGYRVVVGDIRESITFLVYKPKSNEFLTFTDDILPRHITSIKMLDYNTVIGGDKFGNLFI 964
Query: 194 VSTYRE 199
+ E
Sbjct: 965 LRASEE 970
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+ +H T + ++ YA+ FQG +L+G+ +LRL+D+G K+LL K +K+
Sbjct: 845 LNLIHITKISDIAYAITEFQGKVLIGISNHLRLFDMGLKQLLSKANSKI 893
>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
Length = 1220
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +E VHKT V+E P A+ FQG +LVG+G LR+YDLG K++LRK +++ LIV +
Sbjct: 930 GTQLELVHKTKVEEPPTALLAFQGRILVGIGNVLRIYDLGIKQMLRKAQSEVSSKLIVSL 989
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G R+ V DV+E V V YK N+LL F DDT RW T + ++DY +VA DKFGN+
Sbjct: 990 QTQGSRVVVGDVEEGVTYVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAGGDKFGNL 1049
Query: 192 CIV 194
I+
Sbjct: 1050 WIL 1052
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIK 52
+E VHKT V+E P A+ FQG +LVG+G LR+YDLG K++LRK +++V K
Sbjct: 933 LELVHKTKVEEPPTALLAFQGRILVGIGNVLRIYDLGIKQMLRKAQSEVSSK 984
>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
Length = 372
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 83/125 (66%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K +P IV I+
Sbjct: 93 LNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVS 152
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y +N + + +DD PRWIT S +LD++T+ +ADKF +V I+
Sbjct: 153 GDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIMAADKFDSVFIL 212
Query: 195 STYRE 199
E
Sbjct: 213 RVPEE 217
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K
Sbjct: 93 LNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYALGKKKLLKKCEYK 140
>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
Length = 456
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 72 GNAMEFVHKTSVDEVPYAMCP------FQGALLVGVGRYLRLYDLGKKKLLRKCENKHLP 125
G ++ +H+T VD+ P FQG LLVG+G+ LRLY++GK++LL+KCE + LP
Sbjct: 170 GERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKRQLLKKCELRGLP 229
Query: 126 NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
++ +++ G R +V D+ +S+ VRY N+L++ A D R IT +LD NTVA
Sbjct: 230 TMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVG 289
Query: 186 DKFGNVCIVSTYR 198
DKFGNV + R
Sbjct: 290 DKFGNVTTLRLPR 302
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Query: 1 MEFVHKTSVDEVPYAMCP------FQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
++ +H+T VD+ P FQG LLVG+G+ LRLY++GK++LL+KCE ++G
Sbjct: 173 LQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKRQLLKKCE----LRGL 228
Query: 55 RKAHQTHTHSGRSDR-LVGNAMEFVH 79
+T +G DR VG+ M+ +
Sbjct: 229 PTMVKTLQAAG--DRAFVGDMMQSMQ 252
>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
Length = 322
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 72 GNAMEFVHKTSVDEVPYAMCP------FQGALLVGVGRYLRLYDLGKKKLLRKCENKHLP 125
G ++ +H+T VD+ P FQG LLVG+G+ LRLY++GK++LL+KCE + LP
Sbjct: 36 GERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKRQLLKKCELRGLP 95
Query: 126 NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
++ +++ G R +V D+ +S+ VRY N+L++ A D R IT +LD NTVA
Sbjct: 96 TMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVG 155
Query: 186 DKFGNVCIV 194
DKFGNV +
Sbjct: 156 DKFGNVTTL 164
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Query: 1 MEFVHKTSVDEVPYAMCP------FQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGF 54
++ +H+T VD+ P FQG LLVG+G+ LRLY++GK++LL+KCE ++G
Sbjct: 39 LQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEMGKRQLLKKCE----LRGL 94
Query: 55 RKAHQTHTHSGRSDR-LVGNAMEFVH 79
+T +G DR VG+ M+ +
Sbjct: 95 PTMVKTLQAAG--DRAFVGDMMQSMQ 118
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K +P IV I+
Sbjct: 942 LNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVS 1001
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y +N + + +DD PRWIT S +LD++T+ +ADKF +V I+
Sbjct: 1002 GDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFIL 1061
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K
Sbjct: 942 LNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYALGKKKLLKKCEYK 989
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
Length = 1223
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 72/123 (58%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EFVHKT D Y + F G L +GVG L +YD+G K +LRK PN IV +
Sbjct: 940 GTKLEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMGIKAMLRKARGTATPNQIVSL 999
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
E+ G+RI DV E + V YK N+++ F DD RW T + ++DY T A DKFGN+
Sbjct: 1000 EAQGNRIVCGDVSEGITYVVYKPKFNRMIPFVDDVVQRWTTCTTMVDYETAAGGDKFGNL 1059
Query: 192 CIV 194
+V
Sbjct: 1060 WVV 1062
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+EFVHKT D Y + F G L +GVG L +YD+G K +LRK +G +Q
Sbjct: 943 LEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMGIKAMLRKA------RGTATPNQI 996
Query: 61 HTHSGRSDRLV 71
+ + +R+V
Sbjct: 997 VSLEAQGNRIV 1007
>gi|68005631|ref|XP_670088.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56485013|emb|CAI03225.1| hypothetical protein PB301095.00.0 [Plasmodium berghei]
Length = 177
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K +P IV I+
Sbjct: 39 LNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVS 98
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y +N + + +DD PRWIT S +LD++T+ +ADKF +V I+
Sbjct: 99 GDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFIL 158
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K
Sbjct: 39 LNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYALGKKKLLKKCEYK 86
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 84/128 (65%), Gaps = 8/128 (6%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVG------VGRYLRLYDLGKKKLLRKCENKHLPNL- 127
++ +H T ++ VP AM PF+G LLV V LR+Y+LGKK+LL+KCE K LP
Sbjct: 976 LQLIHVTPLEGVPSAMYPFEGRLLVALRGSPTVAPVLRIYELGKKRLLKKCEYKFLPESG 1035
Query: 128 -IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASAD 186
I+ ++ RI+ +D ++S+ ++R++ +NQ+ + +DDT PR IT + VLDYNT+ D
Sbjct: 1036 GIMWLDVNKDRIFAADSRDSILVLRWRYSDNQMQVISDDTYPRCITAAAVLDYNTIVVGD 1095
Query: 187 KFGNVCIV 194
KF N+ ++
Sbjct: 1096 KFDNIAVL 1103
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVG------VGRYLRLYDLGKKKLLRKCENK 48
++ +H T ++ VP AM PF+G LLV V LR+Y+LGKK+LL+KCE K
Sbjct: 976 LQLIHVTPLEGVPSAMYPFEGRLLVALRGSPTVAPVLRIYELGKKRLLKKCEYK 1029
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 55 RKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK 114
RK Q H+ D ++ H T +DE+PYA+ ++G LLVG G LR+Y++G ++
Sbjct: 878 RKFSQGFIHTFIYD---NKTLKLKHSTQIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQR 934
Query: 115 LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTS 174
+L+K E K+L + I I RIYV++V +S+ L+RY + + ADD PR++T S
Sbjct: 935 ILKKAEIKNLNSFITSIMVKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDILPRYVTAS 994
Query: 175 CVLDYNTVASADKFGNVCI 193
VLDY+TV + DKF N+ +
Sbjct: 995 TVLDYHTVIAGDKFENIFV 1013
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ H T +DE+PYA+ ++G LLVG G LR+Y++G +++L+K E K
Sbjct: 895 LKLKHSTQIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIK 942
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T V++ P+ CPF G LL +G LR+Y LGKKKLL+KCE K +P I+ I+
Sbjct: 1007 LNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVS 1066
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y N L + +DD PRWIT S +LD++T+ +ADKF +V ++
Sbjct: 1067 GDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVL 1126
Query: 195 STYRE 199
E
Sbjct: 1127 RVPEE 1131
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T V++ P+ CPF G LL +G LR+Y LGKKKLL+KCE K
Sbjct: 1007 LNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYK 1054
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 55 RKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK 114
RK Q H+ D ++ H T +DE+PYA+ ++G LLVG G LR+Y++G ++
Sbjct: 882 RKFSQGFIHTFVYD---NKTLKLKHSTPIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQR 938
Query: 115 LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTS 174
+L+K E K+L + I I RIYV++V +S+ L+RY + + ADD PR++T S
Sbjct: 939 ILKKAEIKNLNSFITSIMVKEDRIYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTAS 998
Query: 175 CVLDYNTVASADKFGNVCI 193
VLDY+TV + DKF N+ +
Sbjct: 999 TVLDYHTVIAGDKFENIFV 1017
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ H T +DE+PYA+ ++G LLVG G LR+Y++G +++L+K E K
Sbjct: 899 LKLKHSTPIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIK 946
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T V++ P+ CPF G LL +G LR+Y LGKKKLL+KCE K +P I+ I+
Sbjct: 951 LNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVS 1010
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y N L + +DD PRWIT S +LD++T+ +ADKF +V ++
Sbjct: 1011 GDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVL 1070
Query: 195 STYRE 199
E
Sbjct: 1071 RVPEE 1075
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T V++ P+ CPF G LL +G LR+Y LGKKKLL+KCE K
Sbjct: 951 LNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYK 998
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--HLPNLIVKIE 132
+E++HKT +D P M PF G LLVG+G+YLRLYD+G ++LLRK ++ +++ +
Sbjct: 947 LEYLHKTEIDCSPTVMIPFNGRLLVGMGKYLRLYDIGHRQLLRKSSTNIDYISSIVDLVH 1006
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ G RI D S+ ++ EN+ + FADD R IT LDY+TV DKFGNV
Sbjct: 1007 TGGERIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYDTVIGGDKFGNVF 1066
Query: 193 I 193
+
Sbjct: 1067 V 1067
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E++HKT +D P M PF G LLVG+G+YLRLYD+G ++LLRK +
Sbjct: 947 LEYLHKTEIDCSPTVMIPFNGRLLVGMGKYLRLYDIGHRQLLRKSSTNI 995
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K +P IV I+ +
Sbjct: 938 LNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIK-V 996
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+RI+ SD++ESV + Y +N + + +DD PRWIT S +LD++T+ +ADKF +V I+
Sbjct: 997 SNRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFIL 1056
Query: 195 STYRE 199
E
Sbjct: 1057 RVPEE 1061
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T +++ PY CPF G ++V VG LR+Y LGKKKLL+KCE K
Sbjct: 938 LNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYALGKKKLLKKCEYK 985
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
Length = 1329
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T ++E PY C + G L+ +G LR+Y LGKKKLL+KCE K +P IV I+
Sbjct: 1050 LNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKIS 1109
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G+RI+ D++ESV + Y +N L + +DD PRWIT S +LD++T+ +ADKF +V I+
Sbjct: 1110 GNRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFIL 1169
Query: 195 STYRE 199
E
Sbjct: 1170 RVPEE 1174
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T ++E PY C + G L+ +G LR+Y LGKKKLL+KCE K
Sbjct: 1050 LNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYALGKKKLLKKCEYK 1097
>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +E +H T VD P AM PF+G LLVG+G+YLRLY+LGKK+LLRK L + + KI
Sbjct: 910 GSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSST--LVDYLTKI 967
Query: 132 ESMGH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+ H RI V D S ++Y +N + FADD R IT LD++TV DK
Sbjct: 968 VQITHQGKQRIVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHDTVIGGDK 1027
Query: 188 FGNVCI 193
FGNV +
Sbjct: 1028 FGNVFV 1033
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +H T VD P AM PF+G LLVG+G+YLRLY+LGKK+LLRK V K Q
Sbjct: 913 LELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTLVDY--LTKIVQI 970
Query: 61 HTHSGRSDRLVG---NAMEFVHKTSVDEV 86
TH G+ +VG N+ F+ S+D +
Sbjct: 971 -THQGKQRIVVGDGSNSTTFLKYDSLDNI 998
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
E VH T ++ A+ ++G LLVG+ + LR+Y LGKK+LLRK E +++P + I+ +
Sbjct: 1039 ELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKKRLLRKSEYRNIPQGLTWIKVVN 1098
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC-VLDYNTVASADKFGNVCI 193
RI+ D+ V + ++ NQ ++ A D PRW+T++C VLDY+T+A +DKF N+ +
Sbjct: 1099 DRIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIV 1157
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
E VH T ++ A+ ++G LLVG+ + LR+Y LGKK+LLRK E
Sbjct: 1039 ELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKKRLLRKSE 1083
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
E VH T ++ A+ ++G LLVG+ + LR+Y LGKK+LLRK E +++P + I+ +
Sbjct: 1038 ELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKKRLLRKSEYRNIPQGLTWIKVVN 1097
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC-VLDYNTVASADKFGNVCI 193
RI+ D+ V + ++ NQ ++ A D PRW+T++C VLDY+T+A +DKF N+ +
Sbjct: 1098 DRIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIV 1156
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
E VH T ++ A+ ++G LLVG+ + LR+Y LGKK+LLRK E
Sbjct: 1038 ELVHITPIENSATALTGWRGRLLVGINKTLRVYSLGKKRLLRKSE 1082
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G+ +E +H T VD P AM PF+G LLVG+G+YLRLY+LGKK+LLRK L + + KI
Sbjct: 910 GSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSST--LVDYLTKI 967
Query: 132 ESMGH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+ H RI V D S ++Y +N + FADD R IT LD++TV DK
Sbjct: 968 VQITHQGKQRIVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHDTVIGGDK 1027
Query: 188 FGNVCI 193
FGNV +
Sbjct: 1028 FGNVFV 1033
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +H T VD P AM PF+G LLVG+G+YLRLY+LGKK+LLRK V K Q
Sbjct: 913 LELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTLVDY--LTKIVQI 970
Query: 61 HTHSGRSDRLVG---NAMEFVHKTSVDEV 86
TH G+ +VG N+ F+ S D +
Sbjct: 971 -THQGKQRIVVGDGSNSTTFLKYDSSDNI 998
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 80/125 (64%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ +H T V++ P+ PF G LL VG LR+Y LGKKKLL+KCE K +P I+ I+
Sbjct: 997 LNLLHITPVEDQPFCFSPFNGRLLASVGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVS 1056
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
G RI+ SD++ESV + Y N L + +DD PRWIT S +LD++T+ +ADKF +V ++
Sbjct: 1057 GDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVL 1116
Query: 195 STYRE 199
E
Sbjct: 1117 RVPEE 1121
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T V++ P+ PF G LL VG LR+Y LGKKKLL+KCE K
Sbjct: 997 LNLLHITPVEDQPFCFSPFNGRLLASVGNKLRIYALGKKKLLKKCEYK 1044
>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
multifiliis]
Length = 983
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 78/120 (65%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
A++ +HKT VD++P ++ +G LL G G +LR YD+GKKKLL+K E K L + I I++
Sbjct: 703 ALKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSEVKGLQSPINGIQT 762
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G RI+VS V ++V ++++K+ E DD PRW++ VLDY+T DKF N+ +
Sbjct: 763 FGDRIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGDKFENMFV 822
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
++ +HKT VD++P ++ +G LL G G +LR YD+GKKKLL+K E +KG +
Sbjct: 704 LKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSE----VKGLQSPING 759
Query: 61 HTHSGRSDR----LVGNAMEFVHKTSVDEVPYAMC 91
G DR +VG+A+ + ++ Y +C
Sbjct: 760 IQTFG--DRIFVSMVGDAVHIMKHKQKEQTFYEVC 792
>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
Length = 1236
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIVK 130
G EF H+T V E P A+ F+G L+ GVGR+L LYD G K +LRK + + + I
Sbjct: 947 GREFEFFHETEVGEPPLALLAFKGKLIAGVGRHLCLYDCGMKSVLRKAQAPNCVATRITD 1006
Query: 131 IESMGHRIYVSDVQESVFLVRYKR--YENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
I++ G R+ VSD +SV V +K + N+L+ FADDT PR + S +LDY T DKF
Sbjct: 1007 IKTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFADDTVPRHTSASDMLDYETTVGGDKF 1066
Query: 189 GNVCIV 194
GN+ +V
Sbjct: 1067 GNIWLV 1072
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
EF H+T V E P A+ F+G L+ GVGR+L LYD G K +LRK +
Sbjct: 950 FEFFHETEVGEPPLALLAFKGKLIAGVGRHLCLYDCGMKSVLRKAQ 995
>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
Length = 1235
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIV 129
G +EF H+T+V + P A+ F+G LL GVGR+L LYD G K +LRK + + +P I
Sbjct: 945 TGRELEFFHETTVSDPPLALLAFKGKLLAGVGRHLCLYDCGMKSVLRKAQAPNCVPTRIT 1004
Query: 130 KIESMGHRIYVSDVQESVFLVRYKR--YENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+++ G R+ VSD +SV V +K + N+L+ F DDT R T S +LDY+T DK
Sbjct: 1005 GLKTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTIARHTTASEMLDYDTTVGGDK 1064
Query: 188 FGNVCIV 194
FGN+ +V
Sbjct: 1065 FGNIWLV 1071
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN----KVRIKGFR 55
+EF H+T+V + P A+ F+G LL GVGR+L LYD G K +LRK + RI G +
Sbjct: 949 LEFFHETTVSDPPLALLAFKGKLLAGVGRHLCLYDCGMKSVLRKAQAPNCVPTRITGLK 1007
>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus heterostrophus
C5]
Length = 1235
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIV 129
G +EF H+T+V + P A+ F+G LL G+GR+L LYD G K +LRK + + +P I
Sbjct: 945 TGRELEFFHETTVSDPPLALLAFKGKLLAGIGRHLCLYDCGMKSVLRKAQAPNCVPTRIT 1004
Query: 130 KIESMGHRIYVSDVQESVFLVRYKR--YENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+++ G R+ VSD +SV V +K + N+L+ F DDT R T S +LDY+T DK
Sbjct: 1005 GLKTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTVARHTTASEMLDYDTTVGGDK 1064
Query: 188 FGNVCIV 194
FGN+ +V
Sbjct: 1065 FGNIWLV 1071
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN----KVRIKGFR 55
+EF H+T+V + P A+ F+G LL G+GR+L LYD G K +LRK + RI G +
Sbjct: 949 LEFFHETTVSDPPLALLAFKGKLLAGIGRHLCLYDCGMKSVLRKAQAPNCVPTRITGLK 1007
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 54 FRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKK 113
F+ ++HS + + + F+HKT + P+AM F LL+G LRLYD+G K
Sbjct: 938 FKVTSSRNSHSQKGQK----TLLFIHKTESEFAPFAMIEFNNRLLIGTKNLLRLYDIGHK 993
Query: 114 KLLRKCENK--HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171
+LLRK + + N+I G+RI +D S V+Y + ENQ ADD R I
Sbjct: 994 QLLRKASSSIDYFENIIKLTYMGGNRIMAADANISSTFVKYDQVENQFFPLADDIMKRKI 1053
Query: 172 TTSCVLDYNTVASADKFGNVCI 193
T+ C LDY+T+ DKFGN+ +
Sbjct: 1054 TSMCSLDYDTIVGGDKFGNIFV 1075
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F+HKT + P+AM F LL+G LRLYD+G K+LLRK + +
Sbjct: 957 FIHKTESEFAPFAMIEFNNRLLIGTKNLLRLYDIGHKQLLRKASSSI 1003
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 11 EVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRL 70
E+ + L+VG R +D K L ++ G R + +H+ G+ L
Sbjct: 906 EIKFNSSDSSSYLIVGTTR--NSFDKNAKHYLYT----FKVAGSRNS--SHSQKGQKTLL 957
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--HLPNLI 128
F+HKT + P AM F LL+G LRLYD+G K+LLRK + + N+I
Sbjct: 958 ------FIHKTESEFAPLAMIEFNNRLLIGTKNLLRLYDIGHKQLLRKASSSIDYFENII 1011
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
G+RI +D S V+Y + ENQ ADD R IT+ C LDY+T+ DKF
Sbjct: 1012 KLAYMGGNRIMAADASMSSTFVKYDQVENQFFPLADDVMKRKITSMCPLDYDTIVGGDKF 1071
Query: 189 GNVCI 193
GNV +
Sbjct: 1072 GNVFV 1076
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F+HKT + P AM F LL+G LRLYD+G K+LLRK + +
Sbjct: 958 FIHKTESEFAPLAMIEFNNRLLIGTKNLLRLYDIGHKQLLRKASSSI 1004
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIVK 130
G +E ++T+V E P A+ F+G L+ GVGR+L LYD G K LLRK + + +P IV
Sbjct: 958 GRELELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPNSVPTRIVD 1017
Query: 131 IESMGHRIYVSDVQESV--FLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
I++ G R+ VSD +SV F+ + + + N+L+ F DD+ R + S +LDY+T DKF
Sbjct: 1018 IKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDYDTTIGGDKF 1077
Query: 189 GNVCIVSTYRE 199
GN+ +V +E
Sbjct: 1078 GNIWLVRCPKE 1088
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E ++T+V E P A+ F+G L+ GVGR+L LYD G K LLRK + + +
Sbjct: 961 LELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPNSVP--TRIVDI 1018
Query: 61 HTHSGR---SDRLVGNAMEFVHKTSVDEVPYAMCPF 93
T R SD+ + FVHK V P + PF
Sbjct: 1019 KTQGSRLVVSDQ-AQSVTYFVHKDQVH--PNRLIPF 1051
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIVK 130
G +E ++T+V E P A+ F+G L+ GVGR+L LYD G K LLRK + + +P IV
Sbjct: 958 GREIELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPNSVPTRIVD 1017
Query: 131 IESMGHRIYVSDVQESV--FLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
I++ G R+ VSD +SV F+ + + + N+L+ F DD+ R + S +LDY+T DKF
Sbjct: 1018 IKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDYDTTIGGDKF 1077
Query: 189 GNVCIVSTYRE 199
GN+ +V +E
Sbjct: 1078 GNIWLVRCPKE 1088
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E ++T+V E P A+ F+G L+ GVGR+L LYD G K LLRK + + +
Sbjct: 961 IELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPNSVP--TRIVDI 1018
Query: 61 HTHSGR---SDRLVGNAMEFVHKTSVDEVPYAMCPF 93
T R SD+ + FVHK V P + PF
Sbjct: 1019 KTQGSRLVVSDQ-AQSVTYFVHKDQVH--PNRLIPF 1051
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%)
Query: 90 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL 149
+ FQG + V VG LR+YDLG +++LRK + + IV + + G RI V DVQ+ V
Sbjct: 934 LLAFQGRVAVAVGTQLRIYDLGMRQMLRKSQAEVAAQQIVSLNTQGSRIIVGDVQQGVTY 993
Query: 150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
V YK N+L+ F DDT RW T + ++DY +VA DKFGN+ IV
Sbjct: 994 VVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIV 1038
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 16 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+ FQG + V VG LR+YDLG +++LRK + +V
Sbjct: 934 LLAFQGRVAVAVGTQLRIYDLGMRQMLRKSQAEV 967
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
++ VH T ++ V M ++G LLV + + LR+Y LGKKKLL+KCE +++P ++V ++ +
Sbjct: 1022 LKLVHVTPIENVATCMIGWRGRLLVSINKTLRIYSLGKKKLLKKCEYRNIPEVLVWLKVI 1081
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC-VLDYNTVASADKFGN--V 191
RI+ D++ V + +Y +N+L I A+D PRW+T++C +LDY+TV ++DKF N V
Sbjct: 1082 NDRIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDNLIV 1141
Query: 192 CIVST 196
C V T
Sbjct: 1142 CRVPT 1146
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
++ VH T ++ V M ++G LLV + + LR+Y LGKKKLL+KCE
Sbjct: 1022 LKLVHVTPIENVATCMIGWRGRLLVSINKTLRIYSLGKKKLLKKCE 1067
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKH-LPNLIVK 130
G +EF H+T V E P A+ F+G ++ GVGR L LYD G + +LRK + + +P IV
Sbjct: 957 GRELEFFHETEVTEPPTALLAFKGKMVAGVGRNLALYDCGMRSVLRKAQATNCVPTRIVD 1016
Query: 131 IESMGHRIYVSDVQESVFLVRYKR--YENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
+++ G R+ VSD +SV V +K + N+++ F DDT R T + +LDY+T DKF
Sbjct: 1017 LKTQGSRLVVSDSVQSVTYVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVGGDKF 1076
Query: 189 GNVCIV 194
GN+ +V
Sbjct: 1077 GNLWLV 1082
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+EF H+T V E P A+ F+G ++ GVGR L LYD G + +LRK +
Sbjct: 960 LEFFHETEVTEPPTALLAFKGKMVAGVGRNLALYDCGMRSVLRKAQ 1005
>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
Length = 982
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 61/76 (80%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+H+T VD+ P A+C FQG LLVGVG LR+YDLGKKKLL+KCENKH+P LI I
Sbjct: 905 GERLEFLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENKHIPTLINGI 964
Query: 132 ESMGHRIYVSDVQESV 147
S+G RI V+DVQESV
Sbjct: 965 YSVGSRIIVTDVQESV 980
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+EF+H+T VD+ P A+C FQG LLVGVG LR+YDLGKKKLL+KCENK
Sbjct: 908 LEFLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENK 955
>gi|308504990|ref|XP_003114678.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
gi|308258860|gb|EFP02813.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
Length = 270
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 122 KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNT 181
K+ P IV I+S G RI VSD QESV +RY++ +NQL++FADDT PR+++ CVLDY+T
Sbjct: 21 KNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHT 80
Query: 182 VASADKFGNVCIV 194
VA ADKFGN+ +V
Sbjct: 81 VAVADKFGNLAVV 93
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 58 HQTHTHSGRSD---RLVGNA-----MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYD 109
+ H +SG S R+ NA + ++HKT+++ P ++C F LLVG G LRLYD
Sbjct: 925 YSPHYYSGNSIYTFRIKRNAKKKPELVYLHKTTIEFPPSSLCAFNEKLLVGAGNQLRLYD 984
Query: 110 LGKKKLLRKCENK-HLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQ 167
+G+K+LLRK K I KI+ + G I V D ESV +R+ + +NQ + F +DT
Sbjct: 985 VGRKQLLRKTSTKIDFLRRINKIQHIAGDVIVVCDSSESVSFMRFDQTKNQFIAFCNDTA 1044
Query: 168 PRWITTSCVLDYNTVASADKFGNVCI 193
R IT VLD TV + D+FGN+ +
Sbjct: 1045 KRQITALEVLDSRTVIAGDRFGNIFV 1070
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++HKT+++ P ++C F LLVG G LRLYD+G+K+LLRK K+
Sbjct: 952 YLHKTTIEFPPSSLCAFNEKLLVGAGNQLRLYDVGRKQLLRKTSTKI 998
>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
Length = 1203
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 69 RLVGNA-MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL 127
R+ N +E T + + A+ FQG LLVG L LYD+G+K+L+++ +
Sbjct: 923 RISSNGTLELFQTTKTEHLSLALTAFQGKLLVGAKNELILYDIGQKQLVKRSSTRLECYE 982
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
IV +++ G R+ VSDV++SV YK EN + F DDT R +T + +LDY+TV DK
Sbjct: 983 IVDLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHVTRTLLLDYDTVVVGDK 1042
Query: 188 FGNVCIV 194
FGN+ ++
Sbjct: 1043 FGNISVL 1049
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--------VRIK 52
+E T + + A+ FQG LLVG L LYD+G+K+L+++ + ++ +
Sbjct: 930 LELFQTTKTEHLSLALTAFQGKLLVGAKNELILYDIGQKQLVKRSSTRLECYEIVDLKTQ 989
Query: 53 GFR 55
GFR
Sbjct: 990 GFR 992
>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
Length = 991
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN--KHLPNLIVKIE 132
M+ VHKT V+ P ++ F G LLVG+ LR YDLGKK+LLRK KH+ N I++I
Sbjct: 725 MKLVHKTEVEMPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSSTAIKHI-NKIIRIV 783
Query: 133 SMGH-RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
G RI V D S ++ EN + +DDT R IT+ LDY+TV DKFGNV
Sbjct: 784 YQGKDRIVVGDSNNSTIFCKF--IENSFVPISDDTMNRQITSLSTLDYDTVIGGDKFGNV 841
Query: 192 CI 193
+
Sbjct: 842 FV 843
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVR 50
M+ VHKT V+ P ++ F G LLVG+ LR YDLGKK+LLRK ++
Sbjct: 725 MKLVHKTEVEMPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSSTAIK 774
>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
Length = 215
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 47/54 (87%)
Query: 141 SDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
SDVQES VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+C+V
Sbjct: 1 SDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVV 54
>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
Length = 1197
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
N +E +HKT + E+P A+ +G LL G G +LR Y+LGKKKLL+K E K L + + I+
Sbjct: 916 NTLELLHKTEIFEIPGALHAHKGKLLAGCGTFLRYYELGKKKLLKKAEIKGLQSPVNGIQ 975
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN-- 190
+ G RIYVS V +SV +++Y+ + DD PRW+++ VLDY+T DKF N
Sbjct: 976 TFGDRIYVSMVADSVHVLKYRSKDQTFYEVCDDILPRWMSSFQVLDYHTYIGGDKFENAF 1035
Query: 191 VCIVST 196
VC V +
Sbjct: 1036 VCRVPS 1041
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
+E +HKT + E+P A+ +G LL G G +LR Y+LGKKKLL+K E IKG +
Sbjct: 918 LELLHKTEIFEIPGALHAHKGKLLAGCGTFLRYYELGKKKLLKKAE----IKGLQSPVNG 973
Query: 61 HTHSGRSDR----LVGNAMEFVHKTSVDEVPYAMC 91
G DR +V +++ + S D+ Y +C
Sbjct: 974 IQTFG--DRIYVSMVADSVHVLKYRSKDQTFYEVC 1006
>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
Length = 1142
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHR 137
V T D++P A+ PF +++GV L + +G+ KLL+KC +K P+ I +++ G R
Sbjct: 868 VQSTDFDDIPQAIAPFGEYVILGVQETLMVLKVGRTKLLKKCCSKAFPHCINYLKAFGTR 927
Query: 138 IYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
I D ES V++ + E+ L IFADD PR ++ LD +TV DKFG+ CI+
Sbjct: 928 IIAGDAMESFHFVKFDKEEDILSIFADDMVPRHPLSAIGLDRSTVCCGDKFGSFCIL 984
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV--RIKGFRKAHQTH 61
V T D++P A+ PF +++GV L + +G+ KLL+KC +K + KA T
Sbjct: 868 VQSTDFDDIPQAIAPFGEYVILGVQETLMVLKVGRTKLLKKCCSKAFPHCINYLKAFGTR 927
Query: 62 THSGRSDRLVGNAMEFVHKTSVDE 85
+ G+AME H D+
Sbjct: 928 I-------IAGDAMESFHFVKFDK 944
>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica
KU27]
Length = 1145
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++ + + T V+ A F+G +L GVG LRLYD+G K LLRK E + + I ++
Sbjct: 866 SINYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLKSLLRKAEKRQFASDIAQLHV 925
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+G I ++ V + L+RY + ++ I+A D+ PRW+ T+ L+ +TV ++DKFG + +
Sbjct: 926 IGETILLTGVSDGFNLIRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFM 984
Query: 194 VSTYRE 199
+E
Sbjct: 985 YQLPKE 990
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ + + T V+ A F+G +L GVG LRLYD+G K LLRK E +
Sbjct: 867 INYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLKSLLRKAEKR 914
>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
Length = 1145
Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++ + + T V+ A F+G +L GVG LRLYD+G K LL+K E + L + + ++
Sbjct: 865 HSINYCYSTKVEYPVRAFAEFKGMVLAGVGNVLRLYDIGLKSLLKKAEKRQLASDVAQLH 924
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+G I ++ + + L+RY + ++ I+A D+ PRW+ T+ L+ +TV ++DKFG +
Sbjct: 925 VIGETILLTGISDGFNLIRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIF 983
Query: 193 IVSTYRE 199
+ +E
Sbjct: 984 MYQLPKE 990
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ + + T V+ A F+G +L GVG LRLYD+G K LL+K E +
Sbjct: 867 INYCYSTKVEYPVRAFAEFKGMVLAGVGNVLRLYDIGLKSLLKKAEKR 914
>gi|440301552|gb|ELP93938.1| CPSF A subunit region protein, putative, partial [Entamoeba
invadens IP1]
Length = 538
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 57 AHQTHTHSGRSDRLVGNAMEF--VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK 114
H ++G +V NA+ F +HKT V+ V A+C F+G LL G+G LR+YDLGK+
Sbjct: 238 VHDYKENTGECWIVVYNAINFNQIHKTPVESVCRALCAFEGKLLAGIGTTLRMYDLGKQI 297
Query: 115 LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTS 174
L+R+CE +P+ I I ++I +S V V Y N L + D +T+S
Sbjct: 298 LIRRCEVGGIPSDINGINVSNNKIVLSTVASGFVYVDYDVEANILKVVDQDKVWHSLTSS 357
Query: 175 CVLDYNTVASADKFGNVCI 193
+LD T DK+G++ I
Sbjct: 358 TILDEQTTIGFDKYGSLFI 376
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+HKT V+ V A+C F+G LL G+G LR+YDLGK+ L+R+CE
Sbjct: 261 IHKTPVESVCRALCAFEGKLLAGIGTTLRMYDLGKQILIRRCE 303
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-----------H 123
+ F+H T V +P A+ ++G LL GVG + LY LGK++LL+K E +
Sbjct: 933 ITFLHSTKVTGIPRALLAYEGRLLAGVGPDVILYALGKRQLLKKAEYRGGVIDIQGYGVA 992
Query: 124 LPNLI--------VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC 175
P I + + + G+RI+V D++ES+ ++++ +L + DD +PRWIT +
Sbjct: 993 TPRTIGNGGLFGVMWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGAT 1052
Query: 176 VLDYNTVASADKF 188
VLD++TVA DKF
Sbjct: 1053 VLDHHTVALVDKF 1065
>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1145
Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++ + + T V+ A F+G +L GVG LRLYD+G K LL+K E + + I ++
Sbjct: 866 SINYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLKSLLKKAEKRQFASDIAQLHV 925
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+G I ++ V + L+RY + ++ I+A D+ PRW+ T+ L+ +TV ++DKFG + +
Sbjct: 926 IGETILLTGVSDGFNLIRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFM 984
Query: 194 VSTYRE 199
+E
Sbjct: 985 YQLPKE 990
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ + + T V+ A F+G +L GVG LRLYD+G K LL+K E +
Sbjct: 867 INYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLKSLLKKAEKR 914
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIES 133
++++HKT + VP M FQ LLV G + LY+LG+++LLRK + IVK+
Sbjct: 885 LQYIHKTELKYVPQTMEVFQDRLLVASGNSISLYELGQRQLLRKSLTRIDFIQTIVKVTP 944
Query: 134 MGH-RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
RI ++D S+ ++ + ENQ + ADDT R IT LDY+TV DKFGN+
Sbjct: 945 QPRDRILLADSANSIVFAKFDQEENQFVSMADDTVKRNITAWKQLDYDTVIGGDKFGNIF 1004
Query: 193 IVSTYRE 199
+ RE
Sbjct: 1005 VSRLDRE 1011
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++++HKT + VP M FQ LLV G + LY+LG+++LLRK ++
Sbjct: 885 LQYIHKTELKYVPQTMEVFQDRLLVASGNSISLYELGQRQLLRKSLTRI 933
>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
Length = 1146
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 46/51 (90%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRI 51
+EFVHKT V++VP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKVR+
Sbjct: 937 LEFVHKTPVEDVPLAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENKVRL 987
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G +EFVHKT V++VP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK
Sbjct: 934 GEKLEFVHKTPVEDVPLAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENK 984
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 46 ENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYL 105
+N+ I G K + ++ + D+ ++++HKT + VP M FQ LLV G +
Sbjct: 859 KNQYLIVGVTKQEENLLYTFKIDK--KRNLQYIHKTQLKYVPQVMEVFQNRLLVASGNAI 916
Query: 106 RLYDLGKKKLLRKCENK-HLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRYENQLLIFA 163
LY+LG+++LLRK + IVK+ RI ++D S+ ++ ENQ + A
Sbjct: 917 SLYELGQRQLLRKSLTRIDFVQSIVKVSPQPRDRILLADSANSIVFAKFDNEENQFIPVA 976
Query: 164 DDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
DD R IT LDY+T+ DKFGN+ + RE
Sbjct: 977 DDVVKRNITAWKQLDYDTIIGGDKFGNIFVTRLDRE 1012
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
++++HKT + VP M FQ LLV G + LY+LG+++LLRK ++
Sbjct: 886 LQYIHKTQLKYVPQVMEVFQNRLLVASGNAISLYELGQRQLLRKSLTRI 934
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN-KHLPNLIVKIES 133
++ VHKT +D +P + FQ LLV G ++RLYD+G+K+LL+K I KI
Sbjct: 935 LQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKKSTTIIDFSTNINKIIP 994
Query: 134 MGHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+RI + D + S+ ++ +NQ + FADD R IT+ LD +T+ DKFGN+
Sbjct: 995 QTNRIIICDSHKSSIVFAKFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIF 1054
Query: 193 I 193
+
Sbjct: 1055 V 1055
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
++ VHKT +D +P + FQ LLV G ++RLYD+G+K+LL+K
Sbjct: 935 LQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKK 978
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN-KHLPNLIVKIES 133
++ VHKT +D +P + FQ LLV G ++RLYD+G+K+LL+K I KI
Sbjct: 939 LQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKKSTTIIDFSTNINKIIP 998
Query: 134 MGHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+RI + D + S+ ++ +NQ + FADD R IT+ LD +T+ DKFGN+
Sbjct: 999 QTNRIIICDSHKSSIVFAKFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIF 1058
Query: 193 I 193
+
Sbjct: 1059 V 1059
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
++ VHKT +D +P + FQ LLV G ++RLYD+G+K+LL+K
Sbjct: 939 LQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKK 982
>gi|402577494|gb|EJW71450.1| hypothetical protein WUBG_17643 [Wuchereria bancrofti]
Length = 85
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
MG RI VSD QESV +RYK+ + QL IF D+T PR++T C+LDY+TVA D+FGN+ +
Sbjct: 1 MGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNIAV 60
Query: 194 VS 195
VS
Sbjct: 61 VS 62
>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
Length = 1288
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--- 134
+H T +AMCPF LLV + + LY LGKK+LL+K + +LP I KI ++
Sbjct: 959 LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKSIS-YLPTSITKIVALDQW 1017
Query: 135 -GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G R+ V D+ ESV L+ + +NQ + ADD R +T +D TV D+FGN+ +
Sbjct: 1018 NGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDECTVIGGDRFGNIWL 1077
Query: 194 V 194
+
Sbjct: 1078 L 1078
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
+H T +AMCPF LLV + + LY LGKK+LL+K
Sbjct: 959 LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKS 1000
>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--- 134
+H T +AMCPF LLV + + LY LGKK+LL+K + +LP I KI ++
Sbjct: 959 LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKSIS-YLPTSITKIVALDQW 1017
Query: 135 -GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G R+ V D+ ESV L+ + +NQ + ADD R +T +D TV D+FGN+ +
Sbjct: 1018 NGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDECTVIGGDRFGNIWL 1077
Query: 194 V 194
+
Sbjct: 1078 L 1078
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
+H T +AMCPF LLV + + LY LGKK+LL+K
Sbjct: 959 LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKS 1000
>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
Length = 1020
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
G +EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK +++ PN+IV +
Sbjct: 929 GKELEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEVAPNMIVGL 988
Query: 132 ESMGHRI 138
++ G RI
Sbjct: 989 QTQGSRI 995
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+EF+HKT V+E P A+ FQG LL GVG+ LR+YDLG ++LLRK +++V
Sbjct: 932 LEFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEV 980
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL-IVKIES 133
+ +H T V V A ++G LL VG+ +RLY LGKK+LL K E++ + + + +
Sbjct: 907 IRLLHVTRVGGVVRAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHRTCSDHGFIWLNA 966
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIF---ADDTQPRWITTSCVLDYNTVASADKFGN 190
+G RI+ D++E + ++R K Y + F T PRW+T+ LDY+TV + DKF +
Sbjct: 967 VGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGDKFDS 1026
Query: 191 VCIVSTYRE 199
+ + +E
Sbjct: 1027 IFVTRVPQE 1035
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T V V A ++G LL VG+ +RLY LGKK+LL K E++
Sbjct: 907 IRLLHVTRVGGVVRAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHR 954
>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
Length = 1079
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 64/121 (52%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE P++I +E +G
Sbjct: 799 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIG 858
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+I V V V Y N L I D +T S +LD + DK G+V I
Sbjct: 859 DKIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITE 918
Query: 196 T 196
T
Sbjct: 919 T 919
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE
Sbjct: 799 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCE 843
>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1108
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 64/121 (52%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE P++I +E +G
Sbjct: 828 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIG 887
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+I V V V Y N L I D +T S +LD + DK G+V I
Sbjct: 888 DKIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITE 947
Query: 196 T 196
T
Sbjct: 948 T 948
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE
Sbjct: 828 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCE 872
>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1108
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 64/121 (52%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE P++I +E +G
Sbjct: 828 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIG 887
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+I V V V Y N L I D +T S +LD + DK G+V I
Sbjct: 888 DKIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITE 947
Query: 196 T 196
T
Sbjct: 948 T 948
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+ +HKT V+++ +A+ LL G+G LRLYDLGK+ L+RKCE
Sbjct: 828 KLIHKTPVEDICHALTSCGERLLAGIGTTLRLYDLGKQILIRKCE 872
>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
Length = 1272
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 97 LLVGVGRYLRLYDLGKKKLLRKCENKHLPNL-IVKIESMGHRIYVSDVQESVFLVRYKRY 155
LL +G LR+Y LGKK+LL K E++ L N + I+ +G RIY D++ESV L+R K Y
Sbjct: 1030 LLCAIGTRLRMYALGKKQLLLKGEHRSLTNYGFMDIKVIGSRIYCGDIRESVQLLRIKFY 1089
Query: 156 ENQLLIF---ADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ F A T PRW++T +LDY+TV +ADKF +V +
Sbjct: 1090 GEETGEFEMTATSTGPRWLSTMELLDYSTVMAADKFDSVFV 1130
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN-KHLPNLIVKIES 133
++ VHKT +D +P + FQ LLV +++LYD+G+K+LL+K I KI
Sbjct: 907 LQLVHKTELDYIPQVLENFQDKLLVASNNHIQLYDIGQKQLLKKSTTIIDFSQNINKIIP 966
Query: 134 MGHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+RI + D + S+ ++ +NQ + FADD R IT+ LD +T+ DKFGN+
Sbjct: 967 QSNRIIICDSHKSSIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDTLIGGDKFGNIF 1026
Query: 193 I 193
+
Sbjct: 1027 V 1027
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
++ VHKT +D +P + FQ LLV +++LYD+G+K+LL+K
Sbjct: 907 LQLVHKTELDYIPQVLENFQDKLLVASNNHIQLYDIGQKQLLKK 950
>gi|366995619|ref|XP_003677573.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
gi|342303442|emb|CCC71221.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
Length = 1280
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKHLPNL--IVKI 131
+E +H T V+ M PF+ LLV +L LYDLGKK+LL++ +K LP++ IV++
Sbjct: 929 LELLHTTDVEGNVNCMIPFKDLLLVPYDDNFLVLYDLGKKQLLKRSISKTLPSMTRIVQM 988
Query: 132 ES-MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+ RI V D+ +SV L+ + + N + ADD R +T+ LD +TV D+FGN
Sbjct: 989 ANWQDERIAVGDIHQSVTLLHFDQRTNSFIPLADDITQRHVTSLAFLDKSTVIGGDRFGN 1048
Query: 191 V 191
V
Sbjct: 1049 V 1049
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENK 48
+E +H T V+ M PF+ LLV +L LYDLGKK+LL++ +K
Sbjct: 929 LELLHTTDVEGNVNCMIPFKDLLLVPYDDNFLVLYDLGKKQLLKRSISK 977
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 78/129 (60%)
Query: 66 RSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLP 125
R+ ++ ++F+H T D++ Y++ FQG LL GVG L LYDLG KKLL+K +
Sbjct: 891 RTYKITEEGLQFLHSTETDQLVYSLTEFQGKLLAGVGNLLVLYDLGLKKLLKKSLTQTSF 950
Query: 126 NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
+ I I+ G RI +SD+++S + + EN+ + DD R IT S +LDY+TV +
Sbjct: 951 HQITSIDYQGFRIVISDMKQSSMFLSFNAEENRFISLCDDITQRHITCSKMLDYSTVVTG 1010
Query: 186 DKFGNVCIV 194
D+FG + ++
Sbjct: 1011 DRFGTISVL 1019
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYL 31
++F+H T D++ Y++ FQG LL GVG L
Sbjct: 900 LQFLHSTETDQLVYSLTEFQGKLLAGVGNLL 930
>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
Length = 1079
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 63/121 (52%)
Query: 76 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG 135
+ +HKT V+++ A+ LL G+G LRLYDLGK+ L+RKCE P++I +E +G
Sbjct: 799 KLIHKTPVEDICRALTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIG 858
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+I V V V Y N L I D +T S +LD + DK G+V I
Sbjct: 859 DKIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITE 918
Query: 196 T 196
T
Sbjct: 919 T 919
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
+ +HKT V+++ A+ LL G+G LRLYDLGK+ L+RKCE
Sbjct: 799 KLIHKTPVEDICRALTSCGERLLAGIGTTLRLYDLGKQILIRKCE 843
>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1107
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN--KHLP--N 126
+G+ +E +H+T + P + F +LV G ++ LY+LG+ +LLRK + +L N
Sbjct: 829 IGDTLELLHRTKLTIRPTVLIAFNNRVLVASGNHILLYELGQSQLLRKSASVLAYLAQIN 888
Query: 127 LIVKIESMGHRIYVSDVQESVFLVRYKRYE---NQLLIFADDTQPRWITTSCVLDYNTVA 183
++ IES RI ++D S + Y +++ NQ + FADD R +T +DY+TV
Sbjct: 889 NVIHIES--SRIVITDAHSSS--ISYAKFDTGLNQFVGFADDVIKRQVTAIVSVDYDTVI 944
Query: 184 SADKFGNV 191
S DKFGN+
Sbjct: 945 SGDKFGNI 952
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
+E +H+T + P + F +LV G ++ LY+LG+ +LLRK
Sbjct: 833 LELLHRTKLTIRPTVLIAFNNRVLVASGNHILLYELGQSQLLRKS 877
>gi|367015172|ref|XP_003682085.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
gi|359749747|emb|CCE92874.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
Length = 1254
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 72 GNAMEF--VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIV 129
G +F +HKT +++ M PF LLV + L L+ LGKK+LL++ ++ P+ I
Sbjct: 920 GKTFDFRLLHKTLIEDQVTCMIPFSDKLLVPIFGSLVLFGLGKKQLLKQSFSETTPS-IT 978
Query: 130 KIESMGH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
KI ++ + R+ V D++ESV L + +N L ADD R +TT LD +T+
Sbjct: 979 KITALANWKNQRVAVGDIRESVTLFLLDKSKNAFLPIADDIVKRHVTTLAFLDVSTILGG 1038
Query: 186 DKFGNV 191
DKFGN+
Sbjct: 1039 DKFGNI 1044
>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
Length = 1288
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+ F+H T+V+E Y+M F+ LL+ + L LY LG+ +LL+K +P + K+ S+
Sbjct: 953 LTFLHDTAVEEKVYSMIAFKDKLLISLFGNLVLYGLGRSQLLKKTITP-MPPSVTKVTSI 1011
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L Y + ++ + ADD R +T LD +TV D+FGN
Sbjct: 1012 AQWEDSRVAVGDIHESVTLFLYDKRADRFISIADDITKRHVTALEFLDRSTVVGGDRFGN 1071
Query: 191 VCIV 194
+ ++
Sbjct: 1072 IWVL 1075
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 45
+ F+H T+V+E Y+M F+ LL+ + L LY LG+ +LL+K
Sbjct: 953 LTFLHDTAVEEKVYSMIAFKDKLLISLFGNLVLYGLGRSQLLKKT 997
>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
Length = 1295
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--- 134
VH T +DE +AM F +LV + L LY +GKK+LL+K +P I K+ S+
Sbjct: 966 VHDTPIDEQVHAMVAFGDKILVPISNALVLYGMGKKRLLKKSITL-MPPSITKVVSLDQW 1024
Query: 135 -GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
RI V D+ ESV L + + +N + ADDT R +TT LD TV D+F N+ +
Sbjct: 1025 KSQRIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFSNIWV 1084
Query: 194 V 194
+
Sbjct: 1085 L 1085
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
VH T +DE +AM F +LV + L LY +GKK+LL+K
Sbjct: 966 VHDTPIDEQVHAMVAFGDKILVPISNALVLYGMGKKRLLKK 1006
>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 1168
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 73 NAMEFVHKTSVDEVPY-----------AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN 121
N+ V+K +VD + Y +M + G +L G+ R LR+Y++GKK+LLRK E
Sbjct: 877 NSSIAVYKVNVDNIQYLYTTQTEYPVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAEL 936
Query: 122 KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNT 181
+ L + I I + ++I + + + + VR+ + + + I+A DT PRW S L +
Sbjct: 937 RQLASEISDIHVINNKIQLVGISDGISFVRFNQTKQEFDIYA-DTLPRWTVKSVALTPTS 995
Query: 182 VASADKFGNVCI 193
+DKFG + +
Sbjct: 996 YIGSDKFGQIFV 1007
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 11/54 (20%)
Query: 4 VHKTSVDEVPY-----------AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
V+K +VD + Y +M + G +L G+ R LR+Y++GKK+LLRK E
Sbjct: 882 VYKVNVDNIQYLYTTQTEYPVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAE 935
>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
Length = 1231
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH 79
Q L+VG + LY + E+ +R+ + + ++G S +L+ H
Sbjct: 919 QQLLVVGTIKNAHLYPSNNDDGNDEVESSIRVYEYDSNYANLGNTGFSIKLL-------H 971
Query: 80 KTSVDEVPYAMCPFQGALLV-GVGRYLRLYDLGKKKLLRKCENKHL-PNLIVKIESMGHR 137
T+ ++ LL+ +G LR+Y LG+K++L K E++ L N + I+ +G R
Sbjct: 972 VTNTKGWIRCFNNYENKLLLCAIGSKLRMYALGRKQMLLKGEHRSLTSNGFMDIKVVGSR 1031
Query: 138 IYVSDVQESVFLVRYKRYENQLLIF---ADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
IY D++ESV L+R K Y L F T PRW++T +LDY+TV + DKF ++ +
Sbjct: 1032 IYCGDIRESVQLLRLKFYGEDLGEFELTTTSTGPRWLSTMELLDYSTVIAGDKFDSLFV 1090
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL-IVKIES 133
+ +H T + VP A+ ++G L+ +G LRLY LGK++LL K E++ + + I
Sbjct: 912 IRLLHATPITGVPRALAGYEGKLICALGSRLRLYALGKRQLLLKAEHRTCTDHGFIWISV 971
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIF---ADDTQPRWITTSCVLDYNTVASADKFGN 190
G RI+ D++E L+R + Y F T PRW++ LDY+TV DKF +
Sbjct: 972 CGSRIFAGDIREGFQLLRLRFYAEDAAEFEWIGHSTGPRWLSCCEQLDYHTVIGGDKFDS 1031
Query: 191 VCIVSTYRE 199
+ I +E
Sbjct: 1032 LFIARVPQE 1040
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+ +H T + VP A+ ++G L+ +G LRLY LGK++LL K E++
Sbjct: 912 IRLLHATPITGVPRALAGYEGKLICALGSRLRLYALGKRQLLLKAEHR 959
>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
Length = 1166
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%)
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
RIYV DVQES+ V+YK E + IFADDT+P ++T + LD++T+A ADKFGN+ +
Sbjct: 949 RIYVGDVQESIHFVKYKADEGSMYIFADDTKPAYMTAALPLDFDTLAGADKFGNIFV 1005
>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
Length = 1340
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 97 LLVGVGRYLRLYDLGKKKLLRKCENKHLPNL-IVKIESMGHRIYVSDVQESVFLVRYKRY 155
LL +G LR+Y LGKK++L K E++ L + + I+ +G RIY D++ESV L+R K Y
Sbjct: 1100 LLCAIGSKLRMYSLGKKQMLLKGEHRSLTSHGFMDIKVIGSRIYCGDIRESVQLLRIKFY 1159
Query: 156 ENQLLIF---ADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
L F T PRW+++ +LDY+TV + DKF ++ +
Sbjct: 1160 GEDLGEFELTTTSTGPRWLSSMELLDYSTVIAGDKFDSIFV 1200
>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
Length = 1053
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCEN--KHLPNLIVKIE 132
++F+HKT ++E+P + F LLV +RLY+LG+K+LL+K L N+I I
Sbjct: 911 LQFMHKTEIEEIPQVVSNFHNKLLVASKNIIRLYELGQKQLLKKSTTVINFLTNIIKIIP 970
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
I S+ ++ ENQ + ADD R + + +D +T+ ++DKFGN+
Sbjct: 971 QSNRIIISDSHSSSIVFAKFDNLENQFIPIADDIIKRQVISMFPIDSDTILTSDKFGNLG 1030
Query: 193 I 193
+
Sbjct: 1031 V 1031
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
++F+HKT ++E+P + F LLV +RLY+LG+K+LL+K
Sbjct: 911 LQFMHKTEIEEIPQVVSNFHNKLLVASKNIIRLYELGQKQLLKK 954
>gi|254585271|ref|XP_002498203.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
gi|238941097|emb|CAR29270.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
Length = 1302
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
M+ +HKT ++ +AM F+ LL+ V L LY LGKK+LL++ + + I KI S+
Sbjct: 965 MKLLHKTPTEDKVHAMVGFRDKLLIPVFGSLILYGLGKKQLLKRSISSTTAS-ITKISSL 1023
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+ RI V D +ES ++++ N + ADD R +T +D +TV DKFGN
Sbjct: 1024 ANWKNQRIAVGDNRESATILQFDSTNNIFVPIADDVVKRHVTALTFIDQSTVIGGDKFGN 1083
Query: 191 VCIVSTYRE 199
+ + RE
Sbjct: 1084 IWTLRLSRE 1092
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
M+ +HKT ++ +AM F+ LL+ V L LY LGKK+LL++
Sbjct: 965 MKLLHKTPTEDKVHAMVGFRDKLLIPVFGSLILYGLGKKQLLKR 1008
>gi|47200328|emb|CAF88076.1| unnamed protein product [Tetraodon nigroviridis]
Length = 47
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
F +T V++VP A+ PFQG +LVGVG+ LR+YD+GKKKLLRKCENKV
Sbjct: 1 FPRQTPVEDVPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKV 47
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 77 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
F +T V++VP A+ PFQG +LVGVG+ LR+YD+GKKKLLRKCENK
Sbjct: 1 FPRQTPVEDVPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENK 46
>gi|349580241|dbj|GAA25401.1| K7_Rse1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1361
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1077
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + F DD+ R +T LD TV AD++GN
Sbjct: 1078 DQWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGN 1137
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRR 1062
>gi|259148530|emb|CAY81775.1| Rse1p [Saccharomyces cerevisiae EC1118]
Length = 1361
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1077
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + F DD+ R +T LD TV AD++GN
Sbjct: 1078 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGN 1137
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078
Query: 59 QTHTHSGRSDRL-VGNAMEFVHKTSVDEVPYAMCPF---------------QGALLVGVG 102
Q + +RL VG+ E V D PF A ++G
Sbjct: 1079 QWNY-----ERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGAD 1133
Query: 103 RYLRLYDLGKKKLLRKCENKHLPN 126
RY + L K + H P+
Sbjct: 1134 RYGNAWTLRSPPECEKIMSNHDPS 1157
>gi|365763701|gb|EHN05227.1| Rse1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1361
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1077
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + F DD+ R +T LD TV AD++GN
Sbjct: 1078 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGN 1137
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078
Query: 59 QTHTHSGRSDRL-VGNAMEFVHKTSVDEVPYAMCPF---------------QGALLVGVG 102
Q + +RL VG+ E V D PF A ++G
Sbjct: 1079 QWNY-----ERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGAD 1133
Query: 103 RYLRLYDLGKKKLLRKCENKHLPN 126
RY + L K + H P+
Sbjct: 1134 RYGNAWTLRSPPECEKIMSNHDPS 1157
>gi|289900101|gb|ADD21422.1| Rse1p [Saccharomyces kudriavzevii]
Length = 450
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + ++M F+ LL + + LY LGKK+LLRK + P I KI SM
Sbjct: 108 IELLHETEIISPIHSMLKFKNFLLAAIDSTVVLYGLGKKQLLRKSVTQ-TPVSITKIVSM 166
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + DD+ R +TT LD T+ ADKFGN
Sbjct: 167 DQWNYERLAVGDIHESVTLFIWDSAGNVFIPLVDDSVKRHVTTLKFLDEATIIGADKFGN 226
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK 44
+E +H+T + ++M F+ LL + + LY LGKK+LLRK
Sbjct: 108 IELLHETEIISPIHSMLKFKNFLLAAIDSTVVLYGLGKKQLLRK 151
>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
Length = 1267
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH- 136
+H+T + E + PF LLV + L LY LGKK+LL+K K +P+ I ++ ++ +
Sbjct: 947 MHETLIGEKVSTIIPFNNMLLVPLFGSLVLYSLGKKQLLKKSITKLIPS-IRRVSTLANW 1005
Query: 137 ---RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
RI V D ESV + + + N+ + ADDT R +T LD TV DK+GN+
Sbjct: 1006 ENLRIAVGDNYESVTVYEFDKQSNEFIPLADDTIKRSVTALAFLDELTVIGGDKYGNI 1063
>gi|449542041|gb|EMD33022.1| hypothetical protein CERSUDRAFT_99035 [Ceriporiopsis subvermispora
B]
Length = 302
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 18/109 (16%)
Query: 89 AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVF 148
A+ QG L+VGVG+ L +YD+GKK LLRK ENK P + + +Y
Sbjct: 82 AVMALQGKLVVGVGQPLYIYDMGKK-LLRKVENKTFPAAL-------YALYAD------- 126
Query: 149 LVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197
YK EN LL+F + TQPR I ++ +N A+A FGN Y
Sbjct: 127 ---YKAPENHLLVFVEGTQPREIAAMTMISHNPGAAAGHFGNAFASPLY 172
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 15 AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
A+ QG L+VGVG+ L +YD+G KKLLRK ENK
Sbjct: 82 AVMALQGKLVVGVGQPLYIYDMG-KKLLRKVENKT 115
>gi|207342522|gb|EDZ70265.1| YML049Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1267
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 925 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 983
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + + DD+ R +T LD TV AD++GN
Sbjct: 984 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGN 1043
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 925 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 984
Query: 59 Q 59
Q
Sbjct: 985 Q 985
>gi|149245793|ref|XP_001527373.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449767|gb|EDK44023.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1223
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK--HLPNLIVKIE 132
+++ HKT ++ +P + F +LV G + LYDLG+++LLRK + L N++ +
Sbjct: 891 LQYTHKTELNYIPLVIDWFNDKVLVCSGNSISLYDLGQRQLLRKSFTRIDFLKNIVKYLP 950
Query: 133 SMGHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+R+ +D Q SV ++ NQ + ADD R T LDY+T+ DKFG +
Sbjct: 951 LSQNRVVFADSQSASVVFAKFDADGNQFIPIADDVIKRNCTALSKLDYDTIICGDKFGQI 1010
Query: 192 CI 193
I
Sbjct: 1011 SI 1012
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+++ HKT ++ +P + F +LV G + LYDLG+++LLRK ++
Sbjct: 891 LQYTHKTELNYIPLVIDWFNDKVLVCSGNSISLYDLGQRQLLRKSFTRI 939
>gi|151946117|gb|EDN64348.1| pre-spliceosome component [Saccharomyces cerevisiae YJM789]
Length = 1361
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1077
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + + DD+ R +T LD TV AD++GN
Sbjct: 1078 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGN 1137
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078
Query: 59 Q 59
Q
Sbjct: 1079 Q 1079
>gi|6323592|ref|NP_013663.1| Rse1p [Saccharomyces cerevisiae S288c]
gi|2497090|sp|Q04693.1|RSE1_YEAST RecName: Full=Pre-mRNA-splicing factor RSE1; AltName: Full=RNA
splicing and ER to Golgi transport factor 1; AltName:
Full=Spliceosome-associated protein 130
gi|642306|emb|CAA87825.1| unknown [Saccharomyces cerevisiae]
gi|190408196|gb|EDV11461.1| pre-mRNA splicing factor RSE1 [Saccharomyces cerevisiae RM11-1a]
gi|256271284|gb|EEU06357.1| Rse1p [Saccharomyces cerevisiae JAY291]
gi|285813955|tpg|DAA09850.1| TPA: Rse1p [Saccharomyces cerevisiae S288c]
Length = 1361
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1077
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + + DD+ R +T LD TV AD++GN
Sbjct: 1078 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGN 1137
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078
Query: 59 Q 59
Q
Sbjct: 1079 Q 1079
>gi|392297537|gb|EIW08637.1| Rse1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1332
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 990 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1048
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + + DD+ R +T LD TV AD++GN
Sbjct: 1049 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGN 1108
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 990 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1049
Query: 59 Q 59
Q
Sbjct: 1050 Q 1050
>gi|323336187|gb|EGA77458.1| Rse1p [Saccharomyces cerevisiae Vin13]
Length = 1332
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + P I KI SM
Sbjct: 990 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQ-TPVSITKIVSM 1048
Query: 135 GH----RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
R+ V D+ ESV L + N + DD+ R +T LD TV AD++GN
Sbjct: 1049 HQWNYERLAVGDIHESVTLFIWDPAGNVFIPXVDDSVKRHVTVLKFLDEATVIGADRYGN 1108
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK--CENKVRIKGFRKAH 58
+E +H+T + +AM F+ LL +G + LY LGKK+LLR+ + V I H
Sbjct: 990 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1049
Query: 59 Q 59
Q
Sbjct: 1050 Q 1050
>gi|367003052|ref|XP_003686260.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
gi|357524560|emb|CCE63826.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
Length = 1334
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES 133
++ VH T +D+ +++ F LL + + L+ LGKK+LL+K P+ I K+ +
Sbjct: 998 SLSLVHITHIDDKIHSLTSFNDMLLAPIHGNIFLFGLGKKQLLKKSITVTPPS-ITKVTT 1056
Query: 134 M----GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+ RI + D++ES+ + + + N + ADD R TT LD +TV ADK+G
Sbjct: 1057 IKNWNNQRIVIGDIRESIMMFIFNKERNLFIPVADDISGRATTTVEFLDESTVIGADKYG 1116
Query: 190 NV 191
N+
Sbjct: 1117 NI 1118
>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=Protein piccolo
gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
melanogaster]
gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 FLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
Length = 1140
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 FLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
Length = 1140
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ G
Sbjct: 914 YLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNG 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
Length = 1140
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVKI--ESM 134
V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I + ++
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAALYLKAK 918
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T ++ GN+ +
Sbjct: 919 GDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
Length = 1140
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T +
Sbjct: 914 FLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHD 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
Length = 1140
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T +
Sbjct: 914 FLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHD 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
Length = 1140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIVK- 130
N + V +T VD YA+ F G +L G+G ++RLY+ +K LR +C ++ N+I
Sbjct: 857 NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMEC---NIQNMIAAL 913
Query: 131 -IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+++K+ E + A D +P+W+ +LD +T +
Sbjct: 914 FLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHD 973
Query: 190 NVCI 193
N+ +
Sbjct: 974 NLFV 977
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR 43
V +T VD YA+ F G +L G+G ++RLY+ +K LR
Sbjct: 862 VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELR 901
>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 60 THTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKC 119
T SG +++ VH T V+ P A+C + G L+ G+G +RLY LG K++LRK
Sbjct: 852 TSGTSGYISIFSSSSLGHVHTTEVEAPPLALCAYNGLLVAGIGSQVRLYALGLKQVLRKA 911
Query: 120 ENKHLPNLIVKIESMGH-----RIYVSDVQESVFLVRYKRYENQLLIFAD--DTQPRWIT 172
+ + L ++ + H R+ V D+++SV + ++ +I+ D R +T
Sbjct: 912 QIE----LSKRVTCLAHFAGSNRVAVGDIRQSVTVCVVLEEDSGHVIYPLVCDKISRQVT 967
Query: 173 TSCVLDYNTVASADKFGN 190
+DY TVA D+FG
Sbjct: 968 CLFFVDYETVALGDRFGG 985
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 4 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 46
VH T V+ P A+C + G L+ G+G +RLY LG K++LRK +
Sbjct: 870 VHTTEVEAPPLALCAYNGLLVAGIGSQVRLYALGLKQVLRKAQ 912
>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1346
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 66 RSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR--KCENKH 123
R +++ +HKT VD+ AM + +LV + L LY +GKK+LLR KC
Sbjct: 1002 RKSSTASYSLDLLHKTLVDDQVCAMLILKDLILVPIFGNLILYSIGKKRLLRSGKCMT-- 1059
Query: 124 LPNLIVKIESMG----HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY 179
P + K+ ++ RI V D+ ESV + Y L ADD R + + LD
Sbjct: 1060 -PPSLTKVTALSSWNDERIAVGDIHESVMIFDYNSDSKTLKPIADDITKRDVISIEFLDS 1118
Query: 180 NTVASADKFGNV 191
TV +DK+ N+
Sbjct: 1119 RTVIGSDKYSNI 1130
>gi|402583173|gb|EJW77117.1| hypothetical protein WUBG_11977, partial [Wuchereria bancrofti]
Length = 200
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G ++ +H+T DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+
Sbjct: 150 GTTLQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENR 200
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
++ +H+T DEV A+ F+G L GVG+ +RLYDLGK+KLL KCEN+
Sbjct: 153 LQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENR 200
>gi|444319478|ref|XP_004180396.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
gi|387513438|emb|CCH60877.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
Length = 1330
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 80 KTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG---- 135
+ +VD+ + M F+ LLV + L +Y L KK L+ K +P + KI SM
Sbjct: 998 EVTVDDNVHTMAVFRDKLLVPIFGKLAVYKLEKKHLILK-NTIDMPPSVTKITSMAVWKN 1056
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
R+ + D++ESV L+ Y ADD R +TT LD +++ DKFGN+
Sbjct: 1057 QRVAIGDIRESVTLLIYNDSLETFFAVADDVTKRHVTTLQFLDKSSIIGGDKFGNI 1112
>gi|403216596|emb|CCK71092.1| hypothetical protein KNAG_0G00350 [Kazachstania naganishii CBS 8797]
Length = 1263
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E V++T++ + + F LLV V + L+ GKK+LL+K K LP I ++ +
Sbjct: 945 LELVYETTIGKSIRTLSSFGSMLLVVVYGQVVLFGAGKKQLLKKSITK-LPPSIKEMTAF 1003
Query: 135 G----HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
HRI + D+ +SV ++ + + N + ADD R++T LD TV D+FGN
Sbjct: 1004 DCWEDHRIAIGDIHQSVTVMDFDQDLNTFIPVADDVVKRFVTCLKFLDNTTVIGGDRFGN 1063
Query: 191 V 191
+
Sbjct: 1064 I 1064
>gi|50302849|ref|XP_451361.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607703|sp|Q6CXH8.1|RSE1_KLULA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49640492|emb|CAH02949.1| KLLA0A08129p [Kluyveromyces lactis]
Length = 1269
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 69 RLVGNAME--FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN 126
R+ N +E ++H+T V AM F L + + L+ LGKK+LLRK + +P
Sbjct: 945 RVKNNVLETQYIHETMVHSKVNAMVSFGDKLACCILGNVVLFGLGKKQLLRKSITE-MPP 1003
Query: 127 LIVKIESM----GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTV 182
I ++ ++ G + V D++ESV + +Y N + ADD R +TT +D ++V
Sbjct: 1004 YITQVTALDQWDGTMLAVGDIRESVTIFKYDIDNNSFIGVADDIVKRHVTTVKFIDVSSV 1063
Query: 183 ASADKFGNVCIV 194
D+FGN ++
Sbjct: 1064 IGGDRFGNCWVL 1075
>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
Length = 1006
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVR 50
+F+H+T A+ F+G LVG GRYLR+YD+G+KKLL KCENKVR
Sbjct: 939 DFLHRTETPLPVGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENKVR 987
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G+ +F+H+T A+ F+G LVG GRYLR+YD+G+KKLL KCENK
Sbjct: 934 TGDRFDFLHRTETPLPVGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENK 985
>gi|365985726|ref|XP_003669695.1| hypothetical protein NDAI_0D01380 [Naumovozyma dairenensis CBS 421]
gi|343768464|emb|CCD24452.1| hypothetical protein NDAI_0D01380 [Naumovozyma dairenensis CBS 421]
Length = 1417
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 47 NKVRIKGFRKAHQTHTHSGRSDRLVGN-AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYL 105
N +++ F+ + S +L N +E +H+T + + Y M F +L+ L
Sbjct: 1041 NDMKLLTFKLTFHAGSESKAKRKLFSNFKLESLHETLISDHIYTMVEFNQMILLSSLNNL 1100
Query: 106 RLYDLGKKKLLRKC----ENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRYENQLL 160
L +LGKK+LL+K K IVKI + RI V ++ ESV ++ N +
Sbjct: 1101 ILLNLGKKQLLKKSITIISKKLSIKKIVKITQWNNERIAVGELNESVTFFQFDSLTNSFI 1160
Query: 161 IFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
ADD R +T+ LD +TV DKFGNV + RE
Sbjct: 1161 PLADDITKRHVTSLLFLDKSTVIGGDKFGNVWTLRLSRE 1199
>gi|161899297|ref|XP_001712875.1| splicing factor 3b [Bigelowiella natans]
gi|75756369|gb|ABA27263.1| splicing factor 3b [Bigelowiella natans]
Length = 1158
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHR 137
+HK+ ++ PY + F+ +++G + L+ +GKKK+L+ CE L KI +R
Sbjct: 890 LHKSFINFKPYCIEVFKNRVVIGGADKIVLFRIGKKKMLKHCEFTLYFLLPSKIILRSNR 949
Query: 138 IYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ +SD E + + Y + + +++ R + LDY+T+ D FGNV +
Sbjct: 950 MVISDFLEGLIVTEYNTHLDTMIVVGYSVYGRSLNNIQFLDYDTILGTDYFGNVLV 1005
>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
Length = 1138
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-L 127
R N ++ V V Y++ F G +L + +RLY+ K LR E H N L
Sbjct: 851 RYADNELKMVSDKEVKGACYSLVEFNGRVLACINSTVRLYEWTDDKDLR-LECSHFNNVL 909
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+ ++ G I V D+ S+ L++YK+ E A D QP W+T +LD + AD
Sbjct: 910 ALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADN 969
Query: 188 FGN--VCI 193
N VC+
Sbjct: 970 SNNLFVCL 977
>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
Length = 1005
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G+ +F+H+T A+ F+G LVG GRYLR+YD+G+KKLL KCENK
Sbjct: 934 TGDRFDFLHRTETPLPVGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENK 985
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 48
+F+H+T A+ F+G LVG GRYLR+YD+G+KKLL KCENK
Sbjct: 939 DFLHRTETPLPVGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENK 985
>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-V 129
V +E V + + PY+M F G LL + +RL++ ++ LR E H N++ +
Sbjct: 895 VDGKLEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEWNAERELRN-ECSHFNNILAL 953
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+ + G + V D+ S+ L+ YK E A D Q W+++ +LD +T A+
Sbjct: 954 YLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGAESTT 1013
Query: 190 NVCI 193
N+ +
Sbjct: 1014 NLFV 1017
>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1156
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-V 129
V +E V + + PY+M F G LL + +RL++ ++ LR E H N++ +
Sbjct: 870 VDGKLEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEWNAERELRN-ECSHFNNILAL 928
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+ + G + V D+ S+ L+ YK E A D Q W+++ +LD +T A+
Sbjct: 929 YLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGAESTT 988
Query: 190 NVCI 193
N+ +
Sbjct: 989 NLFV 992
>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
Length = 1013
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVR 50
+F+H+T A+ F+G LVG GR+LR+YD+G+KKLL KCENKV+
Sbjct: 946 DFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENKVK 994
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G+ +F+H+T A+ F+G LVG GR+LR+YD+G+KKLL KCENK
Sbjct: 942 GDRFDFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENK 992
>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VK 130
G ++ V + V Y+M F G LL + +RLY+ +K LR E H N++ +
Sbjct: 855 GGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALY 913
Query: 131 IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
+++ G I V D+ SV L+ YK E A D P W++ +LD + A+ N
Sbjct: 914 LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFN 973
Query: 191 VCI 193
+ +
Sbjct: 974 LFV 976
>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
Length = 1138
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-LIVKIESMGHRIYVSDVQES 146
Y++ F G +L + +RLY+ K LR E H N L + ++ G I V D+ S
Sbjct: 870 YSLVEFNGRVLASINSTVRLYEWTDDKDLR-LECSHFNNVLALYCKTKGDFILVGDLMRS 928
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN--VCI 193
+ L++YK+ E A D QP W+T +LD + AD N VC+
Sbjct: 929 ITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCL 977
>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
Length = 980
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-LIVKIESMGHRIYVSDVQES 146
Y++ F G +L + +RLY+ K LR E H N L + ++ G I V D+ S
Sbjct: 870 YSLVEFNGRVLASINSTVRLYEWTDDKDLR-LECSHFNNVLALYCKTKGDFILVGDLMRS 928
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN--VCI 193
+ L++YK+ E A D QP W+T +LD + AD N VC+
Sbjct: 929 ITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCL 977
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 87 PYAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENK-HLPNLIVKIESMGHRIYV 140
PY + PF G LL G+ + L+ D G +L+ +C ++ H+ L++ +++ G I
Sbjct: 828 PYQIKPFNGKLLAGINSKIELFRLSDSDTGHMELVSECCHRGHI--LVLYLQTRGDFIVA 885
Query: 141 SDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
D+ S+ L+ YK+ + Q+ A D W+T +LD +T A+ + N+ V
Sbjct: 886 GDLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDILDDDTFLGAEGYFNLFTV 939
>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
Length = 1140
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G + V D+ S
Sbjct: 871 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDLMRS 929
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L++YK E A D P W+T+ +LD +T A+ N+ +
Sbjct: 930 VTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFV 976
>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
tropicalis]
gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 24 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 82
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 83 KGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 142
>gi|194377326|dbj|BAG57611.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 169 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 227
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 228 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 287
>gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus]
Length = 599
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 317 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 375
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 376 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 435
>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
Length = 1140
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYVKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1138
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 74 AMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-LIVKIE 132
A+ V + + Y++ F G +L + +RLY+ K LR E H N L + +
Sbjct: 856 ALTQVSEKEIKGACYSLVEFNGRVLATINSTVRLYEWTDDKDLR-LECSHFNNVLALYCK 914
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN-- 190
+ G I V D+ S+ L++YK+ E A D QP+W+T +LD + A+ N
Sbjct: 915 TKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPKWMTAVEILDDDAFLGAENSNNLF 974
Query: 191 VCI 193
VC+
Sbjct: 975 VCL 977
>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
Length = 444
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 162 LQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 220
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 221 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 280
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIV 129
+ N + V + V + +C F G +L + + +Y +K LR +C N+ L +
Sbjct: 857 IDNKLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQWTTEKELRAECSNQS-NILAL 915
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
++ G + V D+ S+ ++ YK E L A D P W+T +LD + A+ F
Sbjct: 916 YLKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFY 975
Query: 190 NVCI 193
NV I
Sbjct: 976 NVFI 979
>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius
furo]
Length = 1122
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 1045
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 763 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 821
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 822 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 881
>gi|384080885|dbj|BAM11105.1| damage-specific DNA binding protein 1, 127kDa, partial
[Siebenrockiella crassicollis]
Length = 364
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 200 YSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYVKTKGDFILVGDLMRS 258
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 259 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 305
>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4
Photoproduct Containing Dna-Duplex
gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
Containing Dna-Duplex
gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
Length = 1158
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 934
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 994
>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
Length = 1159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995
>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 544 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 602
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 603 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 662
>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
Length = 1239
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 957 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 1015
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 1016 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 1075
>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
Length = 1124
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 840 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 898
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 899 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 958
>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
sapiens]
Length = 896
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 614 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 672
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 673 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 732
>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCENKHLPNLIV 129
+ N + V + V + +C F G +L + + +Y +K LR +C N+ L +
Sbjct: 861 IDNKLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQWTTEKELRAECSNQS-NILAL 919
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
++ G + V D+ S+ ++ YK E L A D P W+T +LD + A+ F
Sbjct: 920 YLKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFY 979
Query: 190 NVCI 193
NV I
Sbjct: 980 NVFI 983
>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
(Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
Length = 1159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995
>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
Length = 1146
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
Length = 1193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 911 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT-ECNHYNNIMALYLKT 969
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 970 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 1029
>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
Length = 1107
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 865 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 923
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 924 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 983
>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
Length = 1092
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
Length = 1092
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Nomascus leucogenys]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
Length = 1159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995
>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Callithrix jacchus]
gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DNA damage-binding protein a;
Short=DDBa; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=HBV X-associated protein 1;
Short=XAP-1; AltName: Full=UV-damaged DNA-binding
factor; AltName: Full=UV-damaged DNA-binding protein 1;
Short=UV-DDB 1; AltName: Full=XPE-binding factor;
Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
E-complementing protein; Short=XPCe
gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
sapiens]
gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 1150
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 868 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 926
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 927 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 986
>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca
fascicularis]
Length = 1125
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 843 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 901
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 902 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 961
>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 857 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 915
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 916 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 975
>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995
>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
cuniculus]
gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1144
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 862 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 920
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 921 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 980
>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DDBa; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT-ECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
Length = 1143
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
Length = 1143
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
sapiens]
Length = 1146
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT-ECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
Length = 1047
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
Length = 994
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT-ECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
sapiens]
Length = 923
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 641 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 699
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 700 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 759
>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 857 LQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKT 915
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 916 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 975
>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
Length = 1140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT-ECSHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
Length = 1138
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G + V D+ S
Sbjct: 869 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDLMRS 927
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T+ +LD +T A+ N+ +
Sbjct: 928 LTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFV 974
>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
sapiens]
Length = 1094
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
Length = 1138
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G + V D+ S
Sbjct: 869 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDLMRS 927
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T+ +LD +T A+ N+ +
Sbjct: 928 LTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFV 974
>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
Length = 986
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G + V D+ S
Sbjct: 868 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDLMRS 926
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T+ +LD +T A+ N+ +
Sbjct: 927 LTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFV 973
>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 630
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-LIVKIES 133
++ + + + PY++ F G LL V +RL++ + LR E H N L + +++
Sbjct: 349 LQEIAEKEIKGAPYSLVEFNGKLLASVNSVVRLFEWTPEHSLR-VECSHYNNVLALYLKT 407
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
G I V D+ S+ L+ YK E L A D P W++ +LD +T A+ N+
Sbjct: 408 KGDFIVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSAVEILDDDTFLGAENSSNL 465
>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Apis florea]
Length = 1141
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + ++S G I V D+ S
Sbjct: 872 YSLTEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKSKGDFILVGDLMRS 930
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T +LD +T A+ N+ +
Sbjct: 931 LTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFV 977
>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 1141
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + ++S G I V D+ S
Sbjct: 872 YSLTEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKSKGDFILVGDLMRS 930
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T +LD +T A+ N+ +
Sbjct: 931 LTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFV 977
>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 727 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 785
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN--V 191
G I V D+ SV L+ YK E A D P W++ +LD + A+ N V
Sbjct: 786 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNSFV 845
Query: 192 C 192
C
Sbjct: 846 C 846
>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
Length = 1138
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G + V D+ S
Sbjct: 869 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDLMRS 927
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T +LD +T A+ N+ +
Sbjct: 928 LTLLQYKTMEGSFEEIARDYNPNWMTAVEILDDDTFLGAENCFNLFV 974
>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
Length = 1144
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 871 YSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRS 929
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 930 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
Length = 1140
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 871 YSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRS 929
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 930 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
Length = 1140
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 871 YSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRS 929
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 930 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
Length = 1079
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 810 YSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRS 868
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 869 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 915
>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
Length = 1140
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K LR E H N++ + +++ G I V D+ S
Sbjct: 860 YSMVEFNGKLLASINSTVRLYEWTAEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRS 918
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 919 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 965
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLG-----KKKLLRKCENKHLPNLI-VKIESMGHRIYVS 141
Y + F G LL G+ ++L++ G K++L+ +C H+ ++I +K+E+ + I V
Sbjct: 1006 YNLNAFCGKLLAGINSLVKLFNWGVSKENKRELVHEC--SHMGHIIALKVETKDNLIVVG 1063
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
D+ +S+ L++Y+R ++ A D W+T +LD NT A+ N+ V
Sbjct: 1064 DLMKSITLLQYQRESGRIEEVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTV 1116
>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
Length = 1140
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYPMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|449017314|dbj|BAM80716.1| similar to splicing factor 3b subunit 3 [Cyanidioschyzon merolae
strain 10D]
Length = 1678
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
RI+V+ + + L +Y EN+L++ A+D Q RWI +LD +TV +ADKFG++ ++
Sbjct: 1400 RIFVASLHHGISLFKYYVQENRLVLVAEDMQRRWIHRLQLLDADTVVAADKFGSIAVL 1457
>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis
niloticus]
Length = 1140
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G L + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKFLASINSTVRLYEWTAEKELRT-ECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKSMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
Length = 1141
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G I V D+ S
Sbjct: 872 YSLTEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFILVGDLMRS 930
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T +LD +T A+ N+ +
Sbjct: 931 LTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFV 977
>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
Length = 1141
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ G I V D+ S
Sbjct: 872 YSLTEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFILVGDLMRS 930
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T +LD +T A+ N+ +
Sbjct: 931 LTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFV 977
>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
Length = 1158
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K +R E H N++ + +++
Sbjct: 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 934
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 994
>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Hbx
gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Whx
gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Ddb2
gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdtc1
gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Iqwd1
gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr40a
gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr22
gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr21a
gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
Length = 1143
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K +R E H N++ + +++
Sbjct: 861 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 919
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 920 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 979
>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
Length = 1140
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K +R E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G I V D+ SV L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
Length = 1084
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGH 136
V + + Y + F G LL + +RL++ +K LR E + N+I + +++ G
Sbjct: 805 VAEKEIKGAAYTLTEFNGKLLASINSTVRLFEWTAEKELR-VECSYFNNIIALYLKTKGD 863
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
I V D+ SV L+ YK E A D P W+T+ VLD +T A+ N+
Sbjct: 864 FILVGDLMRSVTLLSYKPMEGCFEEIARDYNPNWMTSIDVLDDDTFLGAENSFNI 918
>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
Length = 1128
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y + F G LL + +RL++ +K LR E H N++ + ++ G I V D+ S
Sbjct: 860 YTLVEFNGKLLASINSTVRLFEWTSEKELR-LECSHFNNIVALYLKVKGDFILVGDLMRS 918
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK+ E A D P W+T +LD +T A+ N+ +
Sbjct: 919 MSLLQYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENSFNLFV 965
>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
Length = 968
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y+M F G LL + +RLY+ +K LR E H N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178
G I V D+ SV L+ YK E A D P W++ +LD
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD 961
>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
Length = 1136
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y++ F G LL + +RL++ +K LR E H N+I + +++ + V D+ S
Sbjct: 867 YSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKSDFVLVGDLMRS 925
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
+ L++YK E A D P W+T+ +LD +T A+ N+ I
Sbjct: 926 LTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFI 972
>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
Length = 1140
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y+M F G LL + +RLY+ +K +R E H N++ + +++ G I V D+ S
Sbjct: 871 YSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKTKGDFILVGDLMRS 929
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
V L+ YK E A D P W++ +LD + A+ N+ +
Sbjct: 930 VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976
>gi|443922905|gb|ELU42255.1| cytochrome P450 domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 516
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK 122
G +E H+T VD+V A+ +G L GVG+ L + ++ KKKLLRKCEN
Sbjct: 84 AGKGLELFHQTEVDDVLLALLGTKGRLCAGVGKALSIDEMSKKKLLRKCENN 135
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKV 49
+E H+T VD+V A+ +G L GVG+ L + ++ KKKLLRKCEN
Sbjct: 88 LELFHQTEVDDVLLALLGTKGRLCAGVGKALSIDEMSKKKLLRKCENNA 136
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIESMGHRIYVSDVQE 145
Y++ F +L + +RLY+ +K LR +C N H+ L +K G I V D+
Sbjct: 888 YSLVDFNSKILAAINNVVRLYEWTAEKELRLECSNFNHIIALYLK--RKGDFILVGDLMR 945
Query: 146 SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
S+ L++YK E A D+ P W++ +LD +T A+ N+ +
Sbjct: 946 SITLLQYKTMEGSFEEMARDSNPNWMSAVEILDDDTFLGAENSFNLFV 993
>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
Length = 1148
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-V 129
V ++ V + + PY++ F G LL + +RL++ ++ L E H N++ +
Sbjct: 854 VDGKLQQVAEKEIKGAPYSLLEFNGKLLASINSTVRLFEWNAERELHN-ECSHFNNILAL 912
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ S+ L+ YK E A D Q W+ +LD +T A+
Sbjct: 913 YLKTKGDFILVGDLMRSMSLLAYKPLEGSFEEIARDYQTNWMCAVEILDDDTFLGAESTT 972
Query: 190 NVCI 193
N+ +
Sbjct: 973 NLFV 976
>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1156
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQES 146
Y M F G LL V +RL++ +K LR E H N++ + +++ G I D+ S
Sbjct: 882 YGMAEFNGKLLAAVNCTVRLFEWTAEKELR-LECSHFNNIVALFVKTKGDFIVCGDLMRS 940
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ L++YK E A D P+W T ++D + A+ N+ I+
Sbjct: 941 LTLLQYKTMEGSFEEIARDYNPKWSTAIEIIDDDVFLGAENDKNLFII 988
>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1123
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 70 LVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDL-----GKKKLLRKCENKHL 124
+ G A+ V V Y++ F G LL G+ + L+ G ++L+ +C + H
Sbjct: 900 VAGGALHLVTAKDVKGCVYSLNAFNGKLLAGINSKVNLFKWNLTGDGIRELVSECSH-HG 958
Query: 125 PNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVAS 184
L + ++S G I V D+ S+ L+ YK + + A DT P W+T +LD +
Sbjct: 959 HILTLYLKSRGDFIIVGDLMRSISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVFIG 1018
Query: 185 ADKFGNV 191
+ N+
Sbjct: 1019 GESSFNI 1025
>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
Length = 1149
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK-I 131
N + V + + Y++ F G LL + +RL++ +K LR E H N++ +
Sbjct: 865 NKLTQVSEKEIKGACYSLAEFNGKLLASINSTVRLFEWTVEKELR-LECSHFNNILTLFL 923
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
++ G I + D+ S+ L++YK E A D P W+T +LD + A+ N+
Sbjct: 924 KTKGDFILLGDLMRSMTLLQYKTMEGSFEEIARDYNPNWMTAVEILDDDIFLGAENSFNI 983
Query: 192 CI 193
+
Sbjct: 984 FV 985
>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
Length = 1148
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIESMGH 136
V + + Y++ F G LL + +RL++ ++ LR E H N+I + +++ G
Sbjct: 869 VAEKEIKGAAYSLVEFNGKLLASINSTVRLFEWTAEQELR-LECSHFNNIISLYLKTKGD 927
Query: 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
I V D+ S+ L++YK E A D P W+T ++D +T A+ N+ +
Sbjct: 928 FILVGDLIRSMTLLQYKTMEGCFEEMARDHNPNWMTAVEIIDDDTFLGAENSFNLFV 984
>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
C-169]
Length = 1101
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCEN-KHLP 125
G + V + V Y + PFQG L+ G+ ++L+ + G ++L +C + H+
Sbjct: 820 GGKLSLVCEKEVKGAAYNLHPFQGKLIAGINSRVQLFKWTQSEDGSRELTNECSHVGHV- 878
Query: 126 NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185
L + I + G + V D+ S+ L+ Y+ E L + A D + W+T VLD +T A
Sbjct: 879 -LALYIVTRGDFVIVGDLMRSLQLLIYRADEGILEVRARDYKTHWMTAVEVLDDDTYLGA 937
Query: 186 DKFGNV 191
+ N+
Sbjct: 938 ENSNNI 943
>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
Length = 1329
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
+++ VH+ V+ YAM F+ LLV + + L++ L+ + L + ++
Sbjct: 1041 SSLNLVHEKEVNGCVYAMASFKSKLLVAMNSSVLLFEWSDVTGLQLVSSCSLFVTAMHLK 1100
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
I V D+Q S+ ++RY E+ + A D P WI+ V+D + +A+ N+
Sbjct: 1101 VRDEVILVGDIQRSIAVLRYVPSESSFVEEARDYHPNWISAIEVIDNDYFMAAENSLNIT 1160
Query: 193 I 193
+
Sbjct: 1161 V 1161
>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 933
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDL 110
G ++ V+KT V+EVPYA+ FQG LLVG+ LR+Y++
Sbjct: 778 GQTLQLVYKTEVEEVPYAISHFQGRLLVGIANQLRIYEM 816
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDL 36
++ V+KT V+EVPYA+ FQG LLVG+ LR+Y++
Sbjct: 781 LQLVYKTEVEEVPYAISHFQGRLLVGIANQLRIYEM 816
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDL-----GKKKLLRKCENK-HLPNLIVKIESMGHRIYVS 141
Y++ FQG LL G+ +++Y G + L+ +C + H+ L + + + G + V
Sbjct: 842 YSLAEFQGRLLAGINSRVQMYKWLEQGEGGRALVPECSHAGHV--LALYLATRGDLVVVG 899
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
D+ +S+ L+ + E L + A D P W++ VLD +T A+ N+ V
Sbjct: 900 DLMKSIQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGAENSYNLFTV 952
>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
Length = 1134
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
++ VH V Y M F G LL V + +Y+ K L + + H L + +++
Sbjct: 854 IQQVHSKEVSGAVYCMVAFNGRLLASVNSTVSVYEWTSNKELVEETSFHNNVLALYLKTK 913
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNT 181
G I + D+ S+ L Y+ N++ + + P W+T ++D ++
Sbjct: 914 GDFILIGDLMRSISLCAYRPMNNEIELICKNNDPNWMTAVEIIDDDS 960
>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
Length = 1150
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y+M F G +L V L+L + G + L +C H I++I+ +G I + D
Sbjct: 866 YSMDAFNGKILASVNSMLKLVRWSETESGARTLTEEC-TYHGSIFILQIKCLGDFILIGD 924
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ SV L+ YK + A D P WIT +LD + SA+ N+
Sbjct: 925 LVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNL 973
>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
Length = 1128
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y+M F G +L V L+L + G + L +C H I++I+ +G I + D
Sbjct: 866 YSMDAFNGKILASVNSMLKLVRWSETESGARTLTEEC-TYHGSIFILQIKCLGDFILIGD 924
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ SV L+ YK + A D P WIT +LD + SA+ N+
Sbjct: 925 LVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNL 973
>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1120
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK-----LLRKCENKH 123
R+ +A+E V + V Y + F+G LL G+ L L+ ++ L+ +C + H
Sbjct: 835 RVEADALELVSEKEVRGAVYNLNAFKGKLLAGINSKLELFKWTPREDDAHELVSECSH-H 893
Query: 124 LPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178
+ +++ G I V D+ +S+ L++YK E + A D W+T +LD
Sbjct: 894 GQIITFSVKTRGDWILVGDLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLD 948
>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
Length = 1160
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 61 HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 120
H H G+ +++ + + Y + F G LL + +RL++ K LR
Sbjct: 872 HFHEGKLNQIA--------EKEIKGAAYTLVEFNGKLLASINSTVRLFEWTTDKELRLEC 923
Query: 121 NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN 180
N + + +++ G I V D+ S+ L+ YK E A D P W T +LD +
Sbjct: 924 NYFNSIVALYLKTKGDFILVGDLMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILDDD 983
Query: 181 TVASADKFGNV 191
A+ N+
Sbjct: 984 NFLGAENSFNL 994
>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
Length = 1150
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGK-----KKLLRKCENKHLPNLIV 129
++ V + V Y + F G +L GV +LY + K+L+ +C + L++
Sbjct: 839 LQLVTEKEVKGAVYCLNSFNGKVLAGVNSKAQLYKWSENTDNEKELVSEC-GHYGHTLVL 897
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNT 181
+ES G I V D+ +S+ L+ YK+ + + A D W++ ++D +T
Sbjct: 898 YMESRGDFIVVGDLMKSISLLSYKQLDGTIEEIAKDLNSNWMSAVGIVDDDT 949
>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
Length = 1137
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGK-----KKLLRKCENKHLPNLIV 129
++ V + V Y + F G +L GV +LY + K+L+ +C + L++
Sbjct: 839 LQLVTEKEVKGAVYCLNAFNGKVLAGVNSKAQLYKWSENTDNEKELVSEC-GHYGHTLVL 897
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+ES G I V D+ +SV L+ YK+ + + A D W++ ++D +T ++
Sbjct: 898 YMESRGDFIVVGDLMKSVSLLSYKQLDGTIEEIAKDLNSNWMSALGIVDDDTYIGSETDF 957
Query: 190 NVCIV 194
N+ V
Sbjct: 958 NLFTV 962
>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 725
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 82 SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVS 141
+V+ Y + F G LL GV + +Y+ K L++ H L + ++S G I V
Sbjct: 452 TVNGAVYVLQGFNGKLLAGVNSLVSVYEWTSDKELKQECCYHNTILALYLKSKGDFILVG 511
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
D+ S+ L+ YK +L A D P W+T ++D +T A+ N+ I
Sbjct: 512 DLMRSMTLLAYKPL-GRLEEIAHDFSPNWMTAVEIIDDDTFLGAENSFNLFI 562
>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
Length = 1296
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 67 SDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN 126
+D V ME +H+T D + + F+ L+V L ++GK KLL K + +
Sbjct: 937 TDGTVDLKMELIHETHFDNEVFCIKVFRDMLIVPQYNRLLFCEVGKTKLLNKMIGPAV-D 995
Query: 127 LIVKIESM----GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTV 182
+ KI + RI + D + SV L+++ +++ + A+D R +T LD +T+
Sbjct: 996 YVEKITVLDCWADDRIAIGDFRNSVSLLQFSS-SHEVNVIANDICTRDVTAIKFLDRSTI 1054
Query: 183 ASADKFGNVCIV 194
DKFG+V ++
Sbjct: 1055 IGGDKFGSVWVL 1066
>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
Length = 1152
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
++ V + V Y++ F LL + +RL++ +K LR E H N++ + +++
Sbjct: 865 LQQVAEKEVKGAVYSLVQFNNKLLASINSTVRLFEWTAEKELR-VECNHYNNILALYLKT 923
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
G I V D+ SV L+ YK E A D P W++ +LD + A+ N
Sbjct: 924 KGDFILVGDLMRSVTLLAYKPMEGCFEEIARDFNPNWMSAVEILDDDNFLGAENSFN 980
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK---HLPNLIVKIESMGHRIYVSDVQ 144
Y + F G LL G+ + ++LY ++ R+ +++ H L + ++S G I V D+
Sbjct: 828 YNLNAFNGKLLAGINQKIQLYKWTQRDSTRELQSECGHHGHILALYVQSRGDFIVVGDLM 887
Query: 145 ESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+S+ L+ YK E + A D W+T +LD + A+ N+ V
Sbjct: 888 KSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTV 937
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK---HLPNLIVKIESMGHRIYVSDVQ 144
Y + F G LL G+ + ++LY ++ R+ +++ H L + ++S G I V D+
Sbjct: 828 YNLNAFNGKLLAGINQKIQLYKWTQRDSTRELQSECGHHGHILALYVQSRGDFIVVGDLM 887
Query: 145 ESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+S+ L+ YK E + A D W+T +LD + A+ N+ V
Sbjct: 888 KSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTV 937
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLI- 128
++ V + V Y + F G LL G+ + + LY D G ++L + E+ H +++
Sbjct: 815 IQLVAEKEVKGAVYNLNAFNGKLLAGINQKIALYKWTLRDDGTREL--QYESSHHGHILA 872
Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
+ ++S G I V D+ +S+ L+ YK E + A D W+T +LD +T A+
Sbjct: 873 LYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENS 932
Query: 189 GNVCIV 194
N+ V
Sbjct: 933 FNLFTV 938
>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
Length = 596
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 334 YSLNAFNGKLLAAINQKIQLYKWTLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 392
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ + N+ V E
Sbjct: 393 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKNSE 449
>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
Length = 1134
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 78 VHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIESMG 135
VH+ V P A+ G L+ + +RL++ K+LR +C N H+ L +K+ M
Sbjct: 856 VHELVVRGSPLALRILNGKLVAAINSSVRLFEWTADKVLRLECSNFNHIVALDLKV--MN 913
Query: 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT 173
+ V+D+ SV L+ Y+ E A D W+ T
Sbjct: 914 EEVAVADLMRSVSLLSYRMMEGNFEEVAKDWNSEWMVT 951
>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1148
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGK-----KKLLRKCENKHLPNLIV 129
++ V + V Y + F G LL GV + L+ + ++L+ +C H L++
Sbjct: 847 LQLVTEKEVKGSVYCLNAFNGKLLAGVNSKVYLFKWSESEENGEELVSEC-GHHGHTLVL 905
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKF 188
+ES G I V D+ +S+ L+ +K+ + + A D W+T ++ D N V S F
Sbjct: 906 YMESRGDFIVVGDLMKSISLLNHKQLDGSIEEIARDLNSNWMTAVGIIDDDNYVGSETDF 965
>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
Length = 270
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 8 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 66
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 67 LMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSE 123
>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 831 YSLNAFNGKLLAAINQKIQLYKWTLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 889
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ + N+ V E
Sbjct: 890 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKNSE 946
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W+ +LD + AD N+ V E
Sbjct: 885 LMKSISLLIYKHEEGAIEERARDYNANWMAAVEILDDDIYLGADNCFNLFTVKKNNE 941
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIV 129
++ + + Y++ F G LL + + ++LY D G ++L +C H L +
Sbjct: 452 LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILAL 510
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ +S+ L+ YK E + A D W++ +LD + A+
Sbjct: 511 YVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 570
Query: 190 NVCIVSTYRE 199
N+ V E
Sbjct: 571 NLLTVKKNSE 580
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 LMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVKKNSE 941
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 805 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 863
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 864 LMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSE 920
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName:
Full=UV-damaged DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 LMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSE 941
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE---NKHLPNLIVKI 131
++ V + + Y + F G LL G+ + + LY + R E + H L + +
Sbjct: 815 LQLVAEKEMKGAVYNLNAFNGKLLAGINQKIALYKWTLRDGTRVLEIESSHHGHILALYV 874
Query: 132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+S G I V D+ +S+ L+ YK E + A D W+T +LD +T A+ N+
Sbjct: 875 QSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNL 934
Query: 192 CIV 194
V
Sbjct: 935 FTV 937
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
+E + + PY++ F L + + +RLY +K L+ +I+ ++ +
Sbjct: 873 LETIAEKEAAGAPYSIREFHQKLAIAINSTVRLYSWNAEKDLQSECTPFFNIVILHLKCL 932
Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
G I V D+ S+ L+ Y L D Q W T +LD +T +A+ N+
Sbjct: 933 GDYILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDTFLAAESNLNL 989
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSE 941
>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQES 146
Y + F G LL + +RL+D+ + L C N+++ +++ + G + V D+ S
Sbjct: 950 YRIVDFNGRLLAAINSSVRLFDIKEDSLRLACSFNENI--IVLFLRRKGDFVLVGDLMRS 1007
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+ L+ +K N PRW T +LD +A+ N+ +VS
Sbjct: 1008 LTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVS 1056
>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQES 146
Y + F G LL + +RL+D+ + L C N+++ +++ + G + V D+ S
Sbjct: 950 YRIVDFNGRLLAAINSSVRLFDIKEDSLRLACSFNENI--IVLFLRRKGDFVLVGDLMRS 1007
Query: 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+ L+ +K N PRW T +LD +A+ N+ +VS
Sbjct: 1008 LTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVS 1056
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName:
Full=UV-damaged DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIAVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W+T +L+ + D N+ V E
Sbjct: 885 LMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNE 941
>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
Length = 1134
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 53 GFRKAHQTHTHSGR-----SDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRL 107
G +T T GR D + + + VH+ V P A+ G L+ + +RL
Sbjct: 826 GLIYPDETETKIGRIVVFEVDDVERSKLRRVHELVVRGSPLAIRILNGKLVAAINSSIRL 885
Query: 108 YDLGKKKLLR-KCEN-KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADD 165
++ K LR +C + H+ L +K+ M + V+DV SV L+ Y+ E A D
Sbjct: 886 FEWTTDKELRLECSSFNHVIALDLKV--MNEEVAVADVMRSVSLLSYRMLEGNFEEVAKD 943
Query: 166 TQPRWITT 173
+W+ T
Sbjct: 944 WNSQWMVT 951
>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1074
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDL----GKKKLLRKCENKHLPNLIVKIESMGHRIYVSDV 143
Y++ G LL V + + +Y + +L +C + L + ++ GH I V D+
Sbjct: 823 YSLNALTGKLLAAVNQKIIVYKWVRRDNRHQLQSECSYRGCV-LALHTQTHGHFIVVGDM 881
Query: 144 QESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR 198
SV L+RYK E + + D +WIT +LD + AD N+ + + R
Sbjct: 882 VRSVSLLRYKYEEGLIEVVTRDFNTKWITAVAMLDDDIYIGADNCCNLFTLHSGR 936
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 771 YSLNSFNGKLLAAINQKIQLYKWMLRDDGSRELQSEC-GHHGHILALYVQTRGDFIVVGD 829
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V
Sbjct: 830 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 881
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 840 YSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIAVGD 898
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W+T +L+ + D N+ V E
Sbjct: 899 LMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNE 955
>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
Length = 1157
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESV 147
Y++ F G +L G+ + +++ K R + + L + +++ G I V D+ S+
Sbjct: 884 YSLVEFNGKVLAGINSTVSIFEWTADKEFRYECSYYDNILALYLKTKGDFILVGDLMRSM 943
Query: 148 FLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
L+ Y E A D P+W+T +LD +T A+ N+
Sbjct: 944 TLLVYLPLEGSFQEIAHDFSPKWMTAIEILDDDTFLGAENSYNL 987
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
Length = 1154
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 53 GFRKAHQTHTHSGR-----SDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRL 107
G +T T GR D + + + VH P A+ G L+ + +RL
Sbjct: 846 GLIYPEETDTKFGRIVVFEVDEVERSKLRRVHDLVCRGSPLALRILNGKLVAAINSSVRL 905
Query: 108 YDLGKKKLLR-KCEN-KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADD 165
++ K LR +C N H+ L +K+ M + V+DV SV L+ Y+ E A D
Sbjct: 906 FEWTMDKELRLECSNFNHIMALDLKV--MNEEVAVADVMRSVSLLSYRMLEGNFEEVAKD 963
Query: 166 TQPRWITT 173
W+ T
Sbjct: 964 WNSEWMVT 971
>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
Length = 1103
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 93 FQGALLVGVGRYLRLY------DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQES 146
F G LL GV L L+ D K L+++C I+ I+S G I + D+ +S
Sbjct: 829 FNGKLLAGVSGRLMLFKWAESDDGDNKDLVQECSCSG-GIYILDIDSHGDFILIGDMMKS 887
Query: 147 VFLVRYKRYENQ-----LLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
V L Y+ E Q L + + D Q W++ S +L+ + + D+ GN+
Sbjct: 888 VHLFVYENPEEQHVSGNLRLISKDYQYSWLSCSLMLNESEYVAVDQQGNM 937
>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
Length = 384
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 122 YSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQSEC-GHHGHILALFTQTRGDFIVVGD 180
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W+T ++D + A+ N+ V
Sbjct: 181 LMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTV 232
>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
Length = 1515
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIES 133
+E V V+ Y + F G LL + +RL+D+ + L C N+++ L ++ +
Sbjct: 923 LETVLVHDVNGAVYRLLDFNGRLLAAINSSVRLFDIKEDSLRLACSFNENIIALFLRRK- 981
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
G + V D+ S+ L+ Y+ N PRW T +LD +A+ ++ +
Sbjct: 982 -GDFVLVGDLMRSLTLLLYRPNVNNFEAIGRHRNPRWTTCIEILDDEHFLAAEVENSLFV 1040
Query: 194 VS 195
VS
Sbjct: 1041 VS 1042
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V D
Sbjct: 826 YSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIAVGD 884
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W+ +L+ + D N+ V E
Sbjct: 885 LMKSISLLIYKHEEGAIEERARDYNANWMAAVEILNDDIYLGTDNCFNIFTVKKNNE 941
>gi|342182270|emb|CCC91749.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 1783
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 55/166 (33%)
Query: 81 TSVDEVPYAM--CPFQGALLVGVGRY--LRLYDLGKKKLLRKCENKHLPNLIVKIESM-- 134
++ + P A+ C G L VG+G L+++ G+++ LRK ++P I IE++
Sbjct: 1409 SAATDYPSALHICVEVGLLFVGMGVVSGLQVFAWGQRRFLRKRRLPNVPGRITSIETVFT 1468
Query: 135 ------------------GHRIYVSD-----------------------VQESVFLVRYK 153
G Y +D V +SVF+ +
Sbjct: 1469 TPPNAVSASSSSAGTATPGSSTYAADLYRCGSNSTGATREKRLLIVCGTVDQSVFIATVQ 1528
Query: 154 --------RYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
+ L++ A D PR IT+ LD T+A+AD+FGNV
Sbjct: 1529 PGTSSGSMGSMSFLMLIARDAVPRSITSVACLDERTIAAADRFGNV 1574
>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
Length = 1129
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 59 QTHTHSGR------SDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGK 112
+T + SGR + G M VH + Y++ G L+V + +RL++
Sbjct: 825 ETESKSGRLLIFQVAPSSEGGRMRLVHDKEIKGAAYSIQVLMGKLVVAINSCVRLFEWTA 884
Query: 113 KKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171
+K LR E N+ + + + + V D+ S+ ++ YK E+ A D W+
Sbjct: 885 EKELR-LECSDFDNVTALYLRTKNDVVLVGDLMRSLSVLAYKPMESSFEKIARDFVTNWM 943
Query: 172 TTSCVLDYNTVASADKFGNVCIV 194
T ++D T A+ N+ V
Sbjct: 944 TACEIIDMETFLGAEIMFNLFTV 966
>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 953
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 105 LRLYDLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFA 163
+RLY+ +K LR E H N++ + +++ G I V D+ SV L+ YK E A
Sbjct: 708 VRLYEWTAEKELRT-ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIA 766
Query: 164 DDTQPRWITTSCVLDYNTVASADKFGNVCI 193
D P W++ +LD + A+ N+ +
Sbjct: 767 RDFNPNWMSAIEILDDDNFLGAENAFNLFV 796
>gi|322708188|gb|EFY99765.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 247
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQ 158
+ L +Y++G ++LLR+ + P V ++S G RI V D+Q + +V Y R N+
Sbjct: 183 QILSIYNVGMRQLLRRAQIYISPQHTVPLQSPGFRIVVGDLQHGMTMVVYNRVSNK 238
>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
Length = 1090
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY------DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVS 141
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V
Sbjct: 827 YSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTEC-GHHGHILALYVQTRGDFIVVG 885
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
D+ +S+ L+ +K E + A D W++ +LD + A+ N+ V E
Sbjct: 886 DLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 943
>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY------DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVS 141
Y++ F G LL + + ++LY D G ++L +C H L + +++ G I V
Sbjct: 832 YSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTEC-GHHGHILALYVQTRGDFIVVG 890
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
D+ +S+ L+ +K E + A D W++ +LD + A+ N+ V E
Sbjct: 891 DLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 948
>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
gi|219884971|gb|ACL52860.1| unknown [Zea mays]
Length = 416
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 154 YSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 212
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W+T +LD A+ N+ V
Sbjct: 213 LMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTV 264
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIV 129
++ V + Y + F G LL + + ++LY + G ++L +C H L +
Sbjct: 896 LQLVAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLREDGTRELQSEC-GHHGHILAL 954
Query: 130 KIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG 189
+++ G I V D+ +S+ L+ YK E + A D W++ +LD + A+
Sbjct: 955 YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAENSF 1014
Query: 190 NVCIVSTYRE 199
N+ V E
Sbjct: 1015 NLFTVRKNSE 1024
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 828 YSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQSEC-GHHGHILALFTQTRGDFIVVGD 886
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W+T ++D + A+ N+ V
Sbjct: 887 LMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTV 938
>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
Length = 1054
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 69 RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLG-KKKLLRKCENKHLPNL 127
R+ N + + + ++ Y + PF G LL G+ + ++ ++ G L K E+ L
Sbjct: 777 RIEDNRLILLDEVALPACVYCLLPFNGRLLAGINKRVQAFNWGVDTNKLTKAESYSGHTL 836
Query: 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187
+ S GH + V+D+ +S+ L+ + + + A + P W++ ++D T D
Sbjct: 837 SHSMVSRGHFVLVADLMKSMTLL-VEDQQGAIKELARNPLPIWLSRIEMIDDETFIGGDN 895
Query: 188 FGNVCIVSTYRE 199
N+ +V E
Sbjct: 896 SYNLIVVQKNAE 907
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKK-----------KLLRKCEN-K 122
++ V + V Y + F G LL G+ + L+ G +L ++C +
Sbjct: 829 LQLVAEKEVKGAVYNLNAFNGKLLAGINSKVELFRGGDPVGADGAGGSTYELAKECSHHG 888
Query: 123 HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTV 182
H+ L V + G I V D+ +SV L+ YK E+ + A D W+T +LD +T
Sbjct: 889 HIVALYVAVR--GEFIVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDDDTY 946
Query: 183 ASADKFGNV 191
A+ N+
Sbjct: 947 LGAENNFNL 955
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVS 141
Y++ F G LL + + ++LY D G ++L + E+ H +++ + +++ G I V
Sbjct: 806 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVG 863
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
D+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 864 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSE 921
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVS 141
Y++ F G LL + + ++LY D G ++L + E+ H +++ + +++ G I V
Sbjct: 827 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVG 884
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
D+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSE 942
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 828 YSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 886
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W++ +LD A+ N+ V
Sbjct: 887 LMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTV 938
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 827 YSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 885
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W++ +LD A+ N+ V
Sbjct: 886 LMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTV 937
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 828 YSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 886
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W++ +LD A+ N+ V
Sbjct: 887 LMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTV 938
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLI-VKIESMGHRIYVS 141
Y++ F G LL + + ++LY D G ++L + E+ H +++ + +++ G I V
Sbjct: 827 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVG 884
Query: 142 DVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
D+ +S+ L+ YK E + A D W++ +LD + A+ N+ V E
Sbjct: 885 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSE 942
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine
max]
Length = 1068
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y + F G LL + + ++LY D G +L +C H L + +++ G I V D
Sbjct: 806 YCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC-GHHGHILALYVQTRGDFIVVGD 864
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ ++D + A+ N+ V E
Sbjct: 865 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSE 921
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium
dendrobatidis JAM81]
Length = 1098
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 53 GFRKAHQTHTHSGRSDRLVGNAM---EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYD 109
GF H+ GR N M + VH+ + Y+ G L+ GV + +
Sbjct: 790 GFAFPHEDEPVRGRILVFKVNDMRLLQLVHEYDIRGSAYSFVSVHGRLVAGVNSNVMVLR 849
Query: 110 LGKKKLLRKCEN-KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168
L + ++ H L + + G I V+D+ +S+ L+++ + L A D
Sbjct: 850 WNSDTSLLELQSMNHGHVLALSLAVRGDFILVADLIKSITLLQFDLATDSLKELAYDADS 909
Query: 169 RWITTSCVLDYNTVASADKFGNVCIVS 195
W+T + ++D +T AD N+ +S
Sbjct: 910 NWMTAAELIDDDTFLGADSSMNIFALS 936
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine
max]
Length = 1089
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y + F G LL + + ++LY D G +L +C H L + +++ G I V D
Sbjct: 827 YCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC-GHHGHILALYVQTRGDFIVVGD 885
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ ++D + A+ N+ V E
Sbjct: 886 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSE 942
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 412 YSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 470
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W+T +LD A+ N+ V
Sbjct: 471 LMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTV 522
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y + F G LL + + ++LY D G +L +C H L + +++ G I V D
Sbjct: 827 YCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC-GHHGHILALYVQTRGDFIVVGD 885
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ ++D + A+ N+ V E
Sbjct: 886 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSE 942
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine
max]
Length = 1068
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y + F G LL + + ++LY D G +L +C H L + +++ G I V D
Sbjct: 806 YCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC-GHHGHILALYVQTRGDFIVVGD 864
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+ +S+ L+ YK E + A D W++ ++D + A+ N+ V E
Sbjct: 865 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSE 921
>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
Length = 1145
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIE 132
M V++ + Y++ G L+V V +RL++ K LR +C + ++ L +K +
Sbjct: 858 MRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTK 917
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ I V D+ S+ L+ YK E+ A D W++ ++D ++ A+ N+
Sbjct: 918 N--DLILVGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLF 975
Query: 193 IV 194
V
Sbjct: 976 TV 977
>gi|402592185|gb|EJW86114.1| CPSF A subunit region family protein [Wuchereria bancrofti]
Length = 278
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIE 132
M V++ + Y++ G L+V V +RL++ K LR +C + ++ L +K +
Sbjct: 12 MRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTK 71
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ I V D+ S+ L+ YK E+ A D W++ ++D + A+ N+
Sbjct: 72 N--DLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGAENSYNLF 129
Query: 193 IV 194
V
Sbjct: 130 TV 131
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 88 YAMCPFQGALLVGVGRYLRLY-----DLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y++ F G LL + + ++LY + G +L +C H L + ++ G I V D
Sbjct: 827 YSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSEC-GHHGHILALYTQTRGDFIVVGD 885
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
+ +S+ L+ YK E+ + A D W+T +LD A+ N+ V
Sbjct: 886 LMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTV 937
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 92 PFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR 151
P +G LL + L LY ++L+ K ++ LP++ + + + I D+ SV + +
Sbjct: 797 PIEGKLLASIQGTLYLYRWQSQRLV-KVSSRRLPSVTRCMTTHENFIMTGDLAYSVVMFQ 855
Query: 152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
Y R +QLL A + + + +D N V A++ G++ ++
Sbjct: 856 YDRQSDQLLEVAAHEKTKEVLAMKAIDSNLVIGAEREGHLFVL 898
>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
Length = 1282
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 88 YAMCPFQGALLVGVGRYLRLYDLGKKK-----LLRKCENKHLPNLIVKIESMGHRIYVSD 142
Y + F+G LL G+ L L+ ++ L+ +C + H + +++ G I V D
Sbjct: 1015 YNLNAFKGKLLAGINSKLELFKWTPREDEVHELVSECSH-HGQIVTFAVKTRGDWILVGD 1073
Query: 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178
+ +S+ L+ YK E + A D W+T +LD
Sbjct: 1074 LMKSMSLLLYKPEEGAIDEVARDFNANWMTAVAMLD 1109
>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
Length = 655
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIE 132
M V++ + Y++ G L+V V +RL++ K LR +C + ++ L +K +
Sbjct: 359 MRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTK 418
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ I V D+ S+ L+ YK E+ A D W++ ++D ++ A+ N+
Sbjct: 419 N--DLILVGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLF 476
Query: 193 IV 194
V
Sbjct: 477 TV 478
>gi|308162520|gb|EFO64908.1| Hypothetical protein GLP15_4259 [Giardia lamblia P15]
Length = 1457
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 97 LLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRY 155
L +GV + L +YD+ K+++ + + LP+ IV++ +G+ RI V + + ++ + +
Sbjct: 1226 LCIGVAQKLMVYDITAKEVIAQ---ESLPDAIVRLLFLGNSRIVVVMNKAGLAVLSFSQQ 1282
Query: 156 ENQLLIFADDTQP-RWITTSCVLDYNTVASADKFGNVCIVS 195
+ +L + D+ P R IT L+ + + D+FG + ++S
Sbjct: 1283 KRKLTLELTDSVPMRIITAILPLNSDIIIIGDRFGTISVLS 1323
>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
Length = 655
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 75 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLR-KCEN-KHLPNLIVKIE 132
M V++ + Y++ G L+V V +RL++ K LR +C + ++ L +K +
Sbjct: 367 MRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSDFDNVTALYLKTK 426
Query: 133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
+ I V D+ S+ L+ YK E+ A D W++ ++D + A+ N+
Sbjct: 427 N--DLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGAENSYNLF 484
Query: 193 IV 194
V
Sbjct: 485 TV 486
>gi|396465264|ref|XP_003837240.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
gi|312213798|emb|CBX93800.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
Length = 1089
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 89 AMCPFQGALLVGVGRYLRLYDL----GKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQ 144
AMC +G ++ + + + LYD+ K L K + I G I ++D+
Sbjct: 796 AMC--EGKIVAALIKTIVLYDVEFKTQSKPTLVKAATFRCSTAPIDITVNGPVITIADLM 853
Query: 145 ESVFLVRYKRYE----NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195
+S+ +V+Y++ E ++L+ A Q W T +D T +D GN+ ++S
Sbjct: 854 KSLAMVKYQKGEGGLPDKLVELARHYQVTWATAVAEIDTETFLESDAEGNLMVLS 908
>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
Length = 1140
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 89 AMCPFQGALLVGVGRYLRLYDL----GKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQ 144
AMC +G ++ + + + +YD+ K L K + I G +I ++D+
Sbjct: 879 AMC--EGKIVAALIKTIVVYDIEYRTQSKPDLVKAATFRCSTAPIDITVNGTQIAIADLM 936
Query: 145 ESVFLVRYKRYE----NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199
+S+ +V Y+R E ++L+ A Q W T +D NT +D GN+ ++ YR+
Sbjct: 937 KSMVVVEYQRGETGLPDKLVEVARHFQVTWATAVAEVDENTYLESDAEGNLLVL--YRD 993
>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1223
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 114 KLLRKCEN-KHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWIT 172
+L +C + H+ L V + G I V D+ +S+ L+ YK E + A D P W+T
Sbjct: 978 ELASECSHHGHIVALYVDVR--GDFIVVGDLMKSISLLVYKPDEGVIEERARDFNPNWMT 1035
Query: 173 TSCVLDYNTVASADKFGNVCIV 194
C LD T A+ N+ V
Sbjct: 1036 AVCALDDETYLGAENSFNLFTV 1057
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,032,292,781
Number of Sequences: 23463169
Number of extensions: 116141653
Number of successful extensions: 309230
Number of sequences better than 100.0: 588
Number of HSP's better than 100.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 307964
Number of HSP's gapped (non-prelim): 1161
length of query: 199
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 64
effective length of database: 9,191,667,552
effective search space: 588266723328
effective search space used: 588266723328
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 73 (32.7 bits)